Query 004198
Match_columns 769
No_of_seqs 509 out of 4111
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 17:22:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004198.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004198hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e7a_A PP-1A, serine/threonine 100.0 1.4E-47 4.8E-52 401.3 21.9 225 531-768 8-234 (299)
2 3ll8_A Serine/threonine-protei 100.0 8.1E-46 2.8E-50 394.3 21.5 217 531-768 30-255 (357)
3 3h63_A Serine/threonine-protei 100.0 1.7E-44 5.9E-49 380.6 21.7 222 527-768 12-239 (315)
4 3icf_A PPT, serine/threonine-p 100.0 1.3E-44 4.4E-49 384.2 20.2 222 527-768 13-243 (335)
5 1fjm_A Protein serine/threonin 100.0 5.6E-44 1.9E-48 380.6 21.4 225 531-768 9-235 (330)
6 1aui_A Calcineurin, serine/thr 100.0 3.6E-43 1.2E-47 387.0 22.0 217 531-768 43-268 (521)
7 2ie4_C PP2A-alpha;, serine/thr 100.0 7.9E-43 2.7E-47 369.7 21.3 218 531-768 10-228 (309)
8 1zgk_A Kelch-like ECH-associat 100.0 6.3E-39 2.2E-43 343.9 33.1 281 24-367 9-292 (308)
9 2uvk_A YJHT; unknown function, 100.0 8.4E-38 2.9E-42 341.9 30.1 285 22-366 2-346 (357)
10 3ii7_A Kelch-like protein 7; p 100.0 3.2E-37 1.1E-41 329.9 33.9 266 10-338 26-295 (306)
11 2xn4_A Kelch-like protein 2; s 100.0 4.9E-37 1.7E-41 327.8 34.7 269 9-340 31-302 (302)
12 2xn4_A Kelch-like protein 2; s 100.0 7.7E-37 2.6E-41 326.3 36.1 267 45-368 15-282 (302)
13 1zgk_A Kelch-like ECH-associat 100.0 8E-37 2.7E-41 327.6 33.3 269 9-336 40-308 (308)
14 3ii7_A Kelch-like protein 7; p 100.0 1.4E-36 4.7E-41 325.0 34.7 264 45-368 11-278 (306)
15 4asc_A Kelch repeat and BTB do 100.0 8.5E-38 2.9E-42 336.1 25.1 280 11-345 16-305 (315)
16 2vpj_A Kelch-like protein 12; 100.0 1.7E-36 5.8E-41 323.3 33.9 267 45-367 14-283 (301)
17 2vpj_A Kelch-like protein 12; 100.0 4E-36 1.4E-40 320.4 33.6 266 9-337 32-300 (301)
18 1wao_1 Serine/threonine protei 100.0 3.3E-37 1.1E-41 350.9 23.4 221 529-769 167-393 (477)
19 2woz_A Kelch repeat and BTB do 100.0 1.3E-36 4.4E-41 327.4 26.6 281 10-344 26-314 (318)
20 4asc_A Kelch repeat and BTB do 100.0 2.1E-35 7.3E-40 317.4 27.9 263 45-368 4-283 (315)
21 2woz_A Kelch repeat and BTB do 100.0 5.4E-35 1.8E-39 314.7 30.5 271 28-368 7-293 (318)
22 2zwa_A Leucine carboxyl methyl 100.0 5.6E-35 1.9E-39 347.0 30.8 300 18-362 377-694 (695)
23 2uvk_A YJHT; unknown function, 100.0 1.7E-31 5.8E-36 291.8 24.4 262 11-307 34-352 (357)
24 1k3i_A Galactose oxidase precu 100.0 1.6E-28 5.6E-33 290.4 25.7 288 10-347 168-531 (656)
25 2zwa_A Leucine carboxyl methyl 100.0 9.5E-28 3.2E-32 284.9 28.1 235 96-366 385-639 (695)
26 2z72_A Protein-tyrosine-phosph 99.9 3.2E-26 1.1E-30 248.0 7.0 174 570-746 60-254 (342)
27 1k3i_A Galactose oxidase precu 99.9 1.8E-23 6E-28 247.3 23.7 250 10-295 221-547 (656)
28 2dfj_A Diadenosinetetraphospha 99.9 9.6E-25 3.3E-29 229.3 5.3 150 582-745 2-160 (280)
29 2qjc_A Diadenosine tetraphosph 99.8 1E-21 3.4E-26 205.0 9.8 185 568-767 6-209 (262)
30 1g5b_A Serine/threonine protei 99.7 1.8E-18 6.3E-23 175.9 7.0 141 581-745 13-164 (221)
31 3rqz_A Metallophosphoesterase; 99.3 1E-12 3.5E-17 135.5 5.9 114 582-713 5-123 (246)
32 3qfm_A SAPH, putative uncharac 99.3 1.6E-12 5.6E-17 135.8 7.2 119 582-711 13-140 (270)
33 1nnw_A Hypothetical protein; s 99.2 2E-11 7E-16 126.0 10.6 120 582-710 3-141 (252)
34 1su1_A Hypothetical protein YF 98.7 3.4E-08 1.2E-12 98.8 8.9 68 582-659 27-102 (208)
35 2kkn_A Uncharacterized protein 98.4 2E-07 6.8E-12 90.8 5.2 61 582-658 24-86 (178)
36 2a22_A Vacuolar protein sortin 98.2 5E-06 1.7E-10 83.4 9.9 92 582-711 27-124 (215)
37 1uf3_A Hypothetical protein TT 98.1 2.7E-06 9.1E-11 85.5 6.8 72 582-660 7-78 (228)
38 1s3l_A Hypothetical protein MJ 98.1 1.8E-06 6.2E-11 84.9 5.2 64 582-660 27-90 (190)
39 3ck2_A Conserved uncharacteriz 98.0 4.3E-06 1.5E-10 81.0 5.5 57 582-658 8-64 (176)
40 1z2w_A Vacuolar protein sortin 98.0 1E-05 3.4E-10 79.6 8.1 63 582-659 12-77 (192)
41 1xm7_A Hypothetical protein AQ 98.0 1.3E-05 4.4E-10 79.0 8.1 68 582-659 3-85 (195)
42 2yvt_A Hypothetical protein AQ 97.9 6E-06 2.1E-10 84.9 3.9 72 582-660 7-104 (260)
43 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.062 2.1E-06 57.4 28.3 217 75-362 113-337 (376)
44 3dsm_A Uncharacterized protein 97.4 0.049 1.7E-06 57.4 26.4 264 11-361 20-301 (328)
45 3ib7_A ICC protein; metallopho 97.3 0.00024 8.3E-09 75.4 6.1 71 582-658 27-113 (330)
46 3q7m_A Lipoprotein YFGL, BAMB; 97.2 0.13 4.4E-06 54.9 27.7 180 75-302 153-344 (376)
47 3d03_A Phosphohydrolase; glyce 97.2 0.00054 1.8E-08 70.5 8.2 67 582-658 2-84 (274)
48 3rl5_A Metallophosphoesterase 97.2 0.00033 1.1E-08 73.1 5.9 62 582-659 61-124 (296)
49 2nxf_A Putative dimetal phosph 97.0 0.00036 1.2E-08 73.4 4.5 71 582-658 7-100 (322)
50 2q8u_A Exonuclease, putative; 97.0 0.00056 1.9E-08 73.2 5.3 70 582-659 20-110 (336)
51 3mbr_X Glutamine cyclotransfer 96.9 0.07 2.4E-06 53.8 19.8 193 31-277 22-224 (243)
52 3av0_A DNA double-strand break 96.8 0.0014 4.9E-08 71.5 7.2 71 582-659 22-109 (386)
53 1ii7_A MRE11 nuclease; RAD50, 96.8 0.0016 5.4E-08 69.6 6.8 70 582-658 2-88 (333)
54 2xmo_A LMO2642 protein; phosph 96.5 0.0027 9.3E-08 70.5 6.4 71 582-659 41-139 (443)
55 3nol_A Glutamine cyclotransfer 96.3 0.07 2.4E-06 54.4 15.3 203 20-277 31-245 (262)
56 1kb0_A Quinohemoprotein alcoho 96.3 0.46 1.6E-05 55.5 24.4 124 45-197 77-208 (677)
57 3dsm_A Uncharacterized protein 96.2 0.74 2.5E-05 48.1 23.2 189 75-298 105-303 (328)
58 2ad6_A Methanol dehydrogenase 95.8 1.1 3.6E-05 51.2 24.1 124 45-197 62-194 (571)
59 3nok_A Glutaminyl cyclase; bet 95.8 0.16 5.4E-06 51.9 14.7 189 32-277 57-255 (268)
60 4fbk_A DNA repair and telomere 95.7 0.01 3.5E-07 65.5 6.2 50 583-638 79-140 (472)
61 3t1i_A Double-strand break rep 95.7 0.01 3.5E-07 65.1 6.0 71 583-659 35-153 (431)
62 3tho_B Exonuclease, putative; 95.7 0.0053 1.8E-07 66.7 3.7 69 582-658 2-91 (379)
63 3bws_A Protein LP49; two-domai 95.6 0.75 2.6E-05 49.5 20.7 188 75-301 144-338 (433)
64 4fbw_A DNA repair protein RAD3 95.6 0.015 5E-07 63.7 6.6 51 582-638 15-77 (417)
65 2iwa_A Glutamine cyclotransfer 95.5 0.84 2.9E-05 46.6 19.4 205 32-298 23-238 (266)
66 1kv9_A Type II quinohemoprotei 95.2 3.3 0.00011 48.1 25.8 124 45-197 66-196 (668)
67 1yiq_A Quinohemoprotein alcoho 95.1 5.9 0.0002 46.1 27.6 115 75-197 80-201 (689)
68 1w6s_A Methanol dehydrogenase 95.0 2 6.8E-05 49.2 22.7 126 45-198 62-201 (599)
69 3no2_A Uncharacterized protein 95.0 3 0.0001 42.4 21.8 183 74-303 14-203 (276)
70 1flg_A Protein (quinoprotein e 94.6 5.7 0.00019 45.3 25.0 122 45-196 68-201 (582)
71 2hqs_A Protein TOLB; TOLB, PAL 94.3 3.1 0.00011 44.9 21.2 227 75-362 159-387 (415)
72 3u4y_A Uncharacterized protein 94.2 4.4 0.00015 41.3 21.2 185 74-300 19-210 (331)
73 1ute_A Protein (II purple acid 94.0 0.048 1.6E-06 56.6 5.6 71 582-658 8-95 (313)
74 2qfp_A Purple acid phosphatase 94.0 0.073 2.5E-06 58.5 7.1 70 583-659 122-198 (424)
75 3mbr_X Glutamine cyclotransfer 93.9 1.4 4.9E-05 44.1 15.9 141 12-197 47-189 (243)
76 1l0q_A Surface layer protein; 93.6 4.9 0.00017 42.2 20.7 177 75-302 12-194 (391)
77 2hqs_A Protein TOLB; TOLB, PAL 93.5 2.6 8.8E-05 45.6 18.6 190 75-306 203-396 (415)
78 2ad6_A Methanol dehydrogenase 93.4 13 0.00044 42.1 29.6 121 75-198 125-291 (571)
79 1kb0_A Quinohemoprotein alcoho 93.1 16 0.00054 42.4 32.0 122 75-197 138-301 (677)
80 3vgz_A Uncharacterized protein 93.1 8.7 0.0003 39.3 24.8 190 74-303 68-268 (353)
81 1xzw_A Purple acid phosphatase 93.1 0.1 3.4E-06 57.4 6.4 69 583-659 129-205 (426)
82 3vgz_A Uncharacterized protein 93.1 8.8 0.0003 39.2 24.6 187 75-302 111-308 (353)
83 1gxr_A ESG1, transducin-like e 93.1 4.1 0.00014 41.3 18.5 179 75-301 119-300 (337)
84 3bws_A Protein LP49; two-domai 92.8 3.3 0.00011 44.2 18.1 192 76-302 102-297 (433)
85 1jmx_B Amine dehydrogenase; ox 92.5 2.6 9E-05 43.2 16.1 65 45-137 10-76 (349)
86 3jrp_A Fusion protein of prote 92.5 8.3 0.00028 39.7 20.2 97 75-189 33-135 (379)
87 1l0q_A Surface layer protein; 92.4 12 0.00041 39.1 23.7 177 75-300 54-236 (391)
88 1k8k_C P40, ARP2/3 complex 41 92.3 11 0.00039 38.7 23.2 194 75-307 74-286 (372)
89 3no2_A Uncharacterized protein 92.3 8.4 0.00029 39.0 19.3 155 110-302 5-161 (276)
90 1k8k_C P40, ARP2/3 complex 41 92.1 12 0.00041 38.5 21.7 133 75-226 30-163 (372)
91 2ecf_A Dipeptidyl peptidase IV 91.9 2.7 9.2E-05 48.9 17.0 19 74-92 63-81 (741)
92 2ojh_A Uncharacterized protein 91.7 4.6 0.00016 39.8 16.4 200 75-305 62-266 (297)
93 2ojh_A Uncharacterized protein 91.7 8.5 0.00029 37.8 18.4 190 74-305 21-214 (297)
94 4aez_A CDC20, WD repeat-contai 91.6 15 0.00053 38.7 22.6 214 75-349 156-372 (401)
95 2z3z_A Dipeptidyl aminopeptida 91.5 11 0.00037 43.4 21.5 161 125-304 234-398 (706)
96 3nol_A Glutamine cyclotransfer 91.4 3.7 0.00013 41.6 14.8 167 12-224 69-244 (262)
97 2ovr_B FBW7, F-BOX/WD repeat p 91.0 19 0.00064 38.6 22.1 178 75-302 219-396 (445)
98 4ery_A WD repeat-containing pr 90.6 16 0.00053 36.9 21.5 179 75-300 45-226 (312)
99 3jrp_A Fusion protein of prote 90.1 10 0.00034 39.1 17.9 197 75-307 79-298 (379)
100 3jro_A Fusion protein of prote 90.0 4.8 0.00016 47.3 16.7 96 75-189 31-133 (753)
101 3hfq_A Uncharacterized protein 89.9 12 0.00041 38.4 18.2 151 76-247 19-176 (347)
102 3tgh_A Glideosome-associated p 89.8 0.15 5.2E-06 54.2 3.1 68 582-658 5-86 (342)
103 3v9f_A Two-component system se 89.8 18 0.00061 42.4 21.6 190 75-306 427-620 (781)
104 2iwa_A Glutamine cyclotransfer 89.6 11 0.00037 38.2 16.7 178 13-241 49-236 (266)
105 3ow8_A WD repeat-containing pr 89.5 21 0.0007 36.6 22.2 177 75-299 102-281 (321)
106 1gxr_A ESG1, transducin-like e 88.4 22 0.00075 35.6 19.6 150 110-301 109-259 (337)
107 4a2l_A BT_4663, two-component 88.4 44 0.0015 39.1 24.3 189 75-306 427-623 (795)
108 1pjx_A Dfpase, DIISOPROPYLFLUO 88.4 22 0.00075 35.6 19.8 191 74-299 45-258 (314)
109 4gga_A P55CDC, cell division c 88.2 18 0.00061 38.5 18.5 94 75-189 169-262 (420)
110 3vl1_A 26S proteasome regulato 88.2 24 0.00081 37.1 19.4 94 75-189 119-213 (420)
111 3zwl_B Eukaryotic translation 87.7 17 0.00059 37.0 17.5 146 75-242 96-249 (369)
112 3qfk_A Uncharacterized protein 87.3 0.36 1.2E-05 54.6 4.2 66 582-657 21-112 (527)
113 2z3z_A Dipeptidyl aminopeptida 87.0 34 0.0012 39.1 21.2 116 178-305 234-352 (706)
114 3v9f_A Two-component system se 87.0 38 0.0013 39.5 21.8 181 76-297 470-656 (781)
115 3nok_A Glutaminyl cyclase; bet 86.9 5.7 0.0002 40.3 12.4 137 13-196 80-219 (268)
116 2xdw_A Prolyl endopeptidase; a 86.8 50 0.0017 38.0 22.7 245 74-360 97-366 (710)
117 1w6s_A Methanol dehydrogenase 86.7 48 0.0016 37.7 27.6 83 109-196 252-350 (599)
118 1hp1_A 5'-nucleotidase; metall 86.6 0.29 9.9E-06 55.2 2.9 69 582-657 10-94 (516)
119 3scy_A Hypothetical bacterial 86.5 26 0.0009 36.1 18.2 116 46-188 13-129 (361)
120 1r5m_A SIR4-interacting protei 86.0 26 0.00088 36.5 18.0 180 75-299 171-363 (425)
121 3g4e_A Regucalcin; six bladed 85.6 32 0.0011 34.6 22.6 186 74-302 34-234 (297)
122 1q7f_A NHL, brain tumor CG1071 85.4 30 0.001 34.1 28.0 189 75-303 51-244 (286)
123 2xdw_A Prolyl endopeptidase; a 85.3 19 0.00066 41.6 17.9 203 75-303 151-375 (710)
124 2bkl_A Prolyl endopeptidase; m 85.2 15 0.00053 42.3 16.9 244 74-361 93-350 (695)
125 3hfq_A Uncharacterized protein 85.1 16 0.00054 37.5 15.5 199 75-305 108-327 (347)
126 2ecf_A Dipeptidyl peptidase IV 84.9 22 0.00075 41.0 18.2 109 180-304 264-375 (741)
127 2xbg_A YCF48-like protein; pho 84.6 39 0.0013 34.8 23.9 184 77-305 58-243 (327)
128 2xbg_A YCF48-like protein; pho 84.4 40 0.0014 34.7 23.9 176 84-305 108-287 (327)
129 3c5m_A Oligogalacturonate lyas 84.2 8.7 0.0003 40.1 13.1 150 74-243 167-330 (396)
130 3pe7_A Oligogalacturonate lyas 83.8 30 0.001 35.8 17.2 106 125-243 167-274 (388)
131 3vl1_A 26S proteasome regulato 83.7 22 0.00076 37.3 16.2 95 109-226 108-202 (420)
132 3azo_A Aminopeptidase; POP fam 83.4 35 0.0012 38.6 18.8 201 75-305 161-377 (662)
133 3azo_A Aminopeptidase; POP fam 83.2 40 0.0014 38.1 19.2 206 75-305 102-333 (662)
134 1ri6_A Putative isomerase YBHE 83.0 41 0.0014 33.7 19.0 196 75-306 60-273 (343)
135 3c5m_A Oligogalacturonate lyas 83.0 46 0.0016 34.3 20.5 113 178-305 167-281 (396)
136 3jro_A Fusion protein of prote 82.6 12 0.00042 43.8 14.6 195 75-306 77-295 (753)
137 1ri6_A Putative isomerase YBHE 82.1 36 0.0012 34.2 16.6 18 290-307 303-320 (343)
138 3ow8_A WD repeat-containing pr 82.1 47 0.0016 33.8 19.6 149 110-301 92-241 (321)
139 3pe7_A Oligogalacturonate lyas 82.0 50 0.0017 34.0 18.9 201 75-306 60-282 (388)
140 4ery_A WD repeat-containing pr 81.9 44 0.0015 33.3 22.7 179 75-299 87-270 (312)
141 4aez_A CDC20, WD repeat-contai 81.8 54 0.0018 34.3 19.3 181 75-301 113-297 (401)
142 3ott_A Two-component system se 81.8 83 0.0028 36.4 24.4 191 75-303 392-592 (758)
143 1got_B GT-beta; complex (GTP-b 81.7 49 0.0017 33.8 18.5 179 75-299 77-259 (340)
144 1r5m_A SIR4-interacting protei 81.6 35 0.0012 35.4 16.8 107 160-299 214-321 (425)
145 1yiq_A Quinohemoprotein alcoho 81.3 84 0.0029 36.2 25.6 121 75-197 131-293 (689)
146 4h2g_A 5'-nucleotidase; dimer, 81.1 1.2 4.1E-05 50.5 4.9 66 582-657 27-117 (546)
147 3mkq_A Coatomer beta'-subunit; 80.7 22 0.00074 41.4 16.0 179 75-299 35-219 (814)
148 1itv_A MMP9; adaptive molecula 80.6 29 0.00099 33.2 14.0 156 104-299 11-176 (195)
149 3dwl_C Actin-related protein 2 80.5 15 0.00051 38.0 13.2 133 75-226 33-167 (377)
150 1p22_A F-BOX/WD-repeat protein 80.3 64 0.0022 34.2 24.2 91 75-189 153-243 (435)
151 2z1a_A 5'-nucleotidase; metal- 80.0 1.6 5.5E-05 49.5 5.5 66 582-657 31-118 (552)
152 1qhu_A Protein (hemopexin); be 80.0 74 0.0025 34.8 20.7 58 45-135 158-215 (460)
153 3iuj_A Prolyl endopeptidase; h 79.5 34 0.0012 39.5 16.9 201 75-304 155-366 (693)
154 3u4y_A Uncharacterized protein 79.4 54 0.0019 32.8 22.3 185 75-306 62-261 (331)
155 3dwl_C Actin-related protein 2 79.3 24 0.00082 36.4 14.3 97 75-187 77-176 (377)
156 1yr2_A Prolyl oligopeptidase; 79.3 33 0.0011 39.8 16.8 204 75-303 189-401 (741)
157 1jmx_B Amine dehydrogenase; ox 79.2 56 0.0019 32.8 18.5 104 75-190 65-177 (349)
158 1vyh_C Platelet-activating fac 79.1 38 0.0013 35.9 16.1 124 75-227 130-256 (410)
159 2dg1_A DRP35, lactonase; beta 78.8 58 0.002 32.8 20.9 145 75-242 66-213 (333)
160 4a2l_A BT_4663, two-component 78.8 1.1E+02 0.0036 35.8 22.2 194 76-306 283-489 (795)
161 3e5z_A Putative gluconolactona 78.7 55 0.0019 32.5 23.4 189 74-303 49-252 (296)
162 1flg_A Protein (quinoprotein e 78.5 93 0.0032 35.0 26.7 69 123-196 288-363 (582)
163 4a11_B DNA excision repair pro 78.5 34 0.0012 35.3 15.3 95 75-189 122-219 (408)
164 4gqb_B Methylosome protein 50; 78.4 49 0.0017 34.2 16.3 93 75-189 103-202 (344)
165 2gop_A Trilobed protease; beta 77.5 64 0.0022 32.6 17.8 191 74-305 42-259 (347)
166 3ztv_A NAD nucleotidase, NADN; 77.3 2.4 8E-05 48.4 5.8 66 582-657 14-105 (579)
167 3hxj_A Pyrrolo-quinoline quino 77.2 63 0.0021 32.3 18.4 170 75-302 117-290 (330)
168 2pm9_A Protein WEB1, protein t 76.9 35 0.0012 35.5 14.8 113 164-299 178-296 (416)
169 3ive_A Nucleotidase; structura 76.1 1.4 4.9E-05 49.4 3.5 65 582-657 8-96 (509)
170 3fm0_A Protein CIAO1; WDR39,SG 75.8 56 0.0019 33.5 15.8 163 109-306 27-190 (345)
171 2bkl_A Prolyl endopeptidase; m 75.7 32 0.0011 39.6 15.1 202 75-303 147-357 (695)
172 3mkq_A Coatomer beta'-subunit; 75.5 1.1E+02 0.0037 35.3 19.9 181 75-300 77-262 (814)
173 1p22_A F-BOX/WD-repeat protein 74.9 29 0.001 36.9 13.7 63 108-189 141-203 (435)
174 1kv9_A Type II quinohemoprotei 74.7 1.2E+02 0.0043 34.6 31.7 121 75-198 127-289 (668)
175 4e54_B DNA damage-binding prot 74.7 42 0.0015 35.7 15.0 96 75-189 142-241 (435)
176 3scy_A Hypothetical bacterial 74.2 81 0.0028 32.2 20.9 51 77-135 79-129 (361)
177 3sfz_A APAF-1, apoptotic pepti 73.8 1.1E+02 0.0038 37.5 20.3 123 75-226 637-764 (1249)
178 3v7d_B Cell division control p 73.8 96 0.0033 32.9 27.3 137 126-302 290-426 (464)
179 2aq5_A Coronin-1A; WD40 repeat 73.4 22 0.00074 37.4 12.0 154 111-299 145-301 (402)
180 1sq9_A Antiviral protein SKI8; 72.7 90 0.0031 32.0 18.4 77 209-299 190-269 (397)
181 4ggc_A P55CDC, cell division c 72.7 77 0.0026 31.2 19.3 14 75-88 89-102 (318)
182 3i2n_A WD repeat-containing pr 72.7 27 0.00093 35.3 12.3 182 75-298 44-244 (357)
183 1nir_A Nitrite reductase; hemo 72.3 1.2E+02 0.0043 33.5 18.7 197 75-308 200-418 (543)
184 4g56_B MGC81050 protein; prote 71.9 31 0.0011 35.8 12.7 25 160-189 147-171 (357)
185 1got_B GT-beta; complex (GTP-b 71.7 91 0.0031 31.7 23.2 138 126-299 164-303 (340)
186 2z2n_A Virginiamycin B lyase; 71.6 78 0.0027 30.9 22.6 181 75-303 78-260 (299)
187 1yr2_A Prolyl oligopeptidase; 71.4 1.5E+02 0.0052 34.1 20.0 243 74-360 132-393 (741)
188 1pby_B Quinohemoprotein amine 71.2 57 0.0019 32.5 14.3 48 75-136 115-164 (337)
189 1rwi_B Serine/threonine-protei 71.1 77 0.0026 30.6 20.9 177 75-299 46-224 (270)
190 4gqb_B Methylosome protein 50; 70.6 46 0.0016 34.4 13.6 56 126-189 103-159 (344)
191 3v7d_B Cell division control p 70.5 1.1E+02 0.0039 32.3 22.5 96 75-189 142-237 (464)
192 4e54_B DNA damage-binding prot 70.0 1.2E+02 0.0039 32.2 18.7 94 75-189 187-283 (435)
193 2vdu_B TRNA (guanine-N(7)-)-me 69.9 1.2E+02 0.004 32.2 19.9 40 262-301 358-397 (450)
194 1xfd_A DIP, dipeptidyl aminope 69.2 1.3E+02 0.0044 34.1 18.4 60 74-143 90-149 (723)
195 3gve_A YFKN protein; alpha-bet 68.7 3.1 0.00011 44.0 3.8 66 582-657 13-111 (341)
196 3c9f_A 5'-nucleotidase; 2',3'- 68.4 2.6 8.7E-05 47.8 3.2 70 582-658 17-107 (557)
197 1erj_A Transcriptional repress 67.3 1.2E+02 0.0042 31.4 16.9 129 75-226 145-277 (393)
198 2ynn_A Coatomer subunit beta'; 67.0 88 0.003 31.2 14.6 95 75-189 35-129 (304)
199 3fm0_A Protein CIAO1; WDR39,SG 66.7 85 0.0029 32.0 14.7 133 75-227 38-172 (345)
200 3ei3_B DNA damage-binding prot 66.5 1.2E+02 0.0041 31.0 17.4 181 75-299 96-284 (383)
201 2pbi_B Guanine nucleotide-bind 66.4 1.2E+02 0.0041 31.0 19.2 106 164-299 210-317 (354)
202 3jyf_A 2',3'-cyclic nucleotide 65.9 4.1 0.00014 43.0 4.0 66 582-657 10-104 (339)
203 1t71_A Phosphatase, conserved 65.7 4.3 0.00015 41.5 4.0 66 581-657 5-74 (281)
204 2wdc_A SOXB, sulfur oxidation 65.1 3.3 0.00011 47.0 3.3 36 616-657 126-166 (562)
205 1pgu_A Actin interacting prote 63.7 1.2E+02 0.004 33.4 16.0 111 166-301 175-287 (615)
206 1nir_A Nitrite reductase; hemo 63.4 63 0.0021 36.0 13.6 130 75-224 248-389 (543)
207 1sq9_A Antiviral protein SKI8; 63.4 1.4E+02 0.0046 30.6 22.0 77 157-243 191-268 (397)
208 3zwl_B Eukaryotic translation 63.4 1.3E+02 0.0043 30.2 22.8 191 75-302 54-254 (369)
209 4g56_B MGC81050 protein; prote 63.3 14 0.00046 38.7 7.6 69 211-299 145-215 (357)
210 3o4h_A Acylamino-acid-releasin 63.0 93 0.0032 34.4 15.1 183 77-303 134-320 (582)
211 2gop_A Trilobed protease; beta 62.4 1.3E+02 0.0045 30.1 17.7 136 75-239 85-250 (347)
212 3sfz_A APAF-1, apoptotic pepti 61.5 1.4E+02 0.0048 36.5 17.6 93 75-189 679-775 (1249)
213 2ovr_B FBW7, F-BOX/WD repeat p 61.3 1.6E+02 0.0056 30.8 24.3 172 75-299 179-350 (445)
214 4a11_B DNA excision repair pro 61.2 1.1E+02 0.0039 31.1 14.5 99 75-189 166-277 (408)
215 4gga_A P55CDC, cell division c 60.4 1.7E+02 0.0057 30.6 19.1 93 75-189 125-219 (420)
216 1yfq_A Cell cycle arrest prote 58.1 1.5E+02 0.0051 29.4 17.8 18 75-92 79-97 (342)
217 2aq5_A Coronin-1A; WD40 repeat 57.7 1.6E+02 0.0055 30.4 15.1 110 165-299 145-256 (402)
218 2z2n_A Virginiamycin B lyase; 57.1 1.4E+02 0.0049 28.8 22.5 181 75-303 36-218 (299)
219 1qhu_A Protein (hemopexin); be 55.5 2.3E+02 0.0079 30.8 15.8 59 109-189 158-216 (460)
220 1q7f_A NHL, brain tumor CG1071 55.4 1.5E+02 0.0053 28.7 21.5 167 75-275 100-268 (286)
221 3ju4_A Endo-N-acetylneuraminid 55.0 2.2E+02 0.0076 30.4 15.5 114 45-173 348-482 (670)
222 1qks_A Cytochrome CD1 nitrite 54.9 2.6E+02 0.0089 31.2 17.3 203 125-366 319-542 (567)
223 4aow_A Guanine nucleotide-bind 54.8 1.7E+02 0.0057 28.9 16.7 103 165-299 186-288 (340)
224 2ynn_A Coatomer subunit beta'; 54.8 1.7E+02 0.0058 29.0 16.4 94 75-189 77-173 (304)
225 1pby_B Quinohemoprotein amine 54.6 1.7E+02 0.0057 28.8 20.3 100 75-189 56-164 (337)
226 1qks_A Cytochrome CD1 nitrite 54.5 2.6E+02 0.0091 31.1 18.8 197 75-308 218-437 (567)
227 3lrv_A PRE-mRNA-splicing facto 53.2 1.9E+02 0.0065 29.1 17.1 108 163-299 138-246 (343)
228 3dr2_A Exported gluconolactona 51.9 1.9E+02 0.0065 28.7 16.5 193 75-304 67-274 (305)
229 1k32_A Tricorn protease; prote 51.5 3.8E+02 0.013 32.1 21.4 183 74-304 225-416 (1045)
230 2pm7_B Protein transport prote 51.1 1.6E+02 0.0056 29.0 13.2 13 337-349 265-277 (297)
231 2vdu_B TRNA (guanine-N(7)-)-me 50.7 2.5E+02 0.0084 29.6 23.2 62 164-242 210-271 (450)
232 3dm0_A Maltose-binding peripla 50.3 3.2E+02 0.011 30.8 17.2 105 165-301 532-636 (694)
233 3c7x_A Matrix metalloproteinas 50.0 1.5E+02 0.0052 28.1 11.9 110 109-243 61-176 (196)
234 1xfd_A DIP, dipeptidyl aminope 50.0 2.2E+02 0.0076 32.1 15.7 110 75-196 37-149 (723)
235 2z06_A Putative uncharacterize 49.1 20 0.00067 36.0 5.4 65 582-658 2-69 (252)
236 3iz6_a 40S ribosomal protein R 48.2 2.4E+02 0.0084 28.9 20.1 181 126-349 180-367 (380)
237 2dg1_A DRP35, lactonase; beta 46.6 2.1E+02 0.0071 28.5 13.3 128 157-303 49-177 (333)
238 3hxj_A Pyrrolo-quinoline quino 46.4 2.3E+02 0.0077 28.0 17.1 168 77-302 80-250 (330)
239 2qc5_A Streptogramin B lactona 44.5 2.2E+02 0.0077 27.4 21.8 181 75-303 41-223 (300)
240 3b7f_A Glycosyl hydrolase, BNR 44.3 2.9E+02 0.0099 28.6 16.9 194 77-305 33-270 (394)
241 4h1s_A 5'-nucleotidase; hydrol 43.6 22 0.00076 39.7 5.4 65 583-657 6-95 (530)
242 1pex_A Collagenase-3, MMP-13; 43.3 2.3E+02 0.0078 27.1 19.1 155 104-301 28-196 (207)
243 1pgu_A Actin interacting prote 43.2 3.5E+02 0.012 29.3 20.4 25 269-302 219-243 (615)
244 2p4o_A Hypothetical protein; p 42.7 2.6E+02 0.009 27.7 20.8 218 18-302 20-246 (306)
245 2cn3_A Xyloglucanase, beta-1,4 42.6 4.4E+02 0.015 30.3 28.2 238 76-345 46-321 (737)
246 1su3_A Interstitial collagenas 41.3 3.7E+02 0.013 29.0 15.6 156 104-302 267-437 (450)
247 3mmy_A MRNA export factor; mRN 41.2 2.8E+02 0.0094 27.5 19.4 98 75-197 108-208 (368)
248 3ba0_A Macrophage metalloelast 40.9 3.4E+02 0.012 28.4 16.2 157 104-302 185-355 (365)
249 2pbi_B Guanine nucleotide-bind 40.4 3.1E+02 0.011 27.8 14.4 125 75-226 220-347 (354)
250 2mad_H Methylamine dehydrogena 40.1 3.4E+02 0.012 28.2 28.2 103 76-189 48-157 (373)
251 3dm0_A Maltose-binding peripla 39.9 4.4E+02 0.015 29.6 16.1 58 158-227 436-494 (694)
252 1t70_A Phosphatase; crystal, X 39.9 42 0.0014 33.6 6.2 65 582-658 2-69 (255)
253 2qc5_A Streptogramin B lactona 39.6 2.6E+02 0.009 26.8 20.3 181 75-303 83-265 (300)
254 3ott_A Two-component system se 39.5 1.9E+02 0.0066 33.2 13.0 121 76-223 494-615 (758)
255 3hrp_A Uncharacterized protein 39.4 3.6E+02 0.012 28.3 14.7 195 75-305 152-362 (409)
256 4d9s_A UVB-resistance protein 39.0 3.7E+02 0.013 28.2 14.9 62 154-224 182-251 (406)
257 3ba0_A Macrophage metalloelast 38.4 2.8E+02 0.0097 29.0 12.9 109 109-243 236-351 (365)
258 2mad_H Methylamine dehydrogena 38.2 1.7E+02 0.0058 30.6 11.2 68 109-189 278-351 (373)
259 1vyh_C Platelet-activating fac 38.0 2.2E+02 0.0075 29.7 12.2 108 162-300 118-226 (410)
260 3oyo_A Hemopexin fold protein 37.3 2.8E+02 0.0096 26.8 11.7 111 108-241 69-197 (225)
261 2pm9_A Protein WEB1, protein t 37.0 3.5E+02 0.012 27.5 19.4 20 331-350 388-407 (416)
262 3lrv_A PRE-mRNA-splicing facto 36.5 3.4E+02 0.012 27.1 16.3 96 75-189 149-245 (343)
263 4aow_A Guanine nucleotide-bind 36.0 3.2E+02 0.011 26.7 15.2 25 160-189 94-118 (340)
264 1rwi_B Serine/threonine-protei 35.5 2.9E+02 0.01 26.1 16.4 149 109-301 34-184 (270)
265 3i2n_A WD repeat-containing pr 35.1 3.4E+02 0.012 26.7 16.2 24 268-300 179-202 (357)
266 2hes_X YDR267CP; beta-propelle 34.9 3.5E+02 0.012 26.9 16.5 240 48-355 26-278 (330)
267 2be1_A Serine/threonine-protei 33.6 49 0.0017 34.6 5.8 113 74-198 19-140 (339)
268 1pjx_A Dfpase, DIISOPROPYLFLUO 31.8 3.1E+02 0.011 26.7 11.6 122 109-241 28-161 (314)
269 1gen_A Gelatinase A; hydrolase 30.9 3.6E+02 0.012 25.8 14.9 158 103-299 34-204 (218)
270 2ghs_A AGR_C_1268P; regucalcin 30.7 4.2E+02 0.014 26.5 26.3 135 75-241 71-209 (326)
271 1su3_A Interstitial collagenas 30.7 5.4E+02 0.018 27.7 14.0 65 162-243 366-433 (450)
272 3iz6_a 40S ribosomal protein R 30.3 4.5E+02 0.015 26.7 23.3 143 75-242 180-329 (380)
273 3e5z_A Putative gluconolactona 30.0 3.9E+02 0.013 25.9 17.4 153 110-300 40-206 (296)
274 1k32_A Tricorn protease; prote 29.9 7.7E+02 0.026 29.3 23.8 198 75-304 33-242 (1045)
275 3acd_A Hypoxanthine-guanine ph 28.9 36 0.0012 32.2 3.4 134 550-699 10-176 (181)
276 1hxn_A Hemopexin, HPX; heme, b 28.8 3E+02 0.01 26.5 10.3 64 163-242 72-144 (219)
277 4d9s_A UVB-resistance protein 28.7 3E+02 0.01 29.0 11.3 65 154-224 130-199 (406)
278 2ece_A 462AA long hypothetical 27.6 6.2E+02 0.021 27.4 15.3 126 108-243 24-174 (462)
279 3o4h_A Acylamino-acid-releasin 27.6 6.2E+02 0.021 27.4 17.4 95 128-243 134-228 (582)
280 1pex_A Collagenase-3, MMP-13; 27.6 4E+02 0.014 25.3 14.8 108 109-243 79-193 (207)
281 3b7f_A Glycosyl hydrolase, BNR 27.3 5.3E+02 0.018 26.5 17.6 172 76-275 82-297 (394)
282 3k26_A Polycomb protein EED; W 26.9 4.6E+02 0.016 25.7 12.7 132 75-226 44-182 (366)
283 1z68_A Fibroblast activation p 26.7 2.5E+02 0.0085 31.7 11.0 17 288-304 337-353 (719)
284 2yeq_A Apased, PHOD, alkaline 25.9 84 0.0029 35.0 6.3 33 583-625 119-154 (527)
285 2fp8_A Strictosidine synthase; 25.5 5E+02 0.017 25.6 18.8 239 75-362 40-313 (322)
286 3k26_A Polycomb protein EED; W 24.1 5.2E+02 0.018 25.3 16.3 108 164-299 85-194 (366)
287 2ymu_A WD-40 repeat protein; u 23.1 7.1E+02 0.024 26.6 16.5 55 160-226 434-488 (577)
288 3kci_A Probable E3 ubiquitin-p 21.9 4.9E+02 0.017 27.0 11.4 160 154-344 168-342 (389)
289 2ghs_A AGR_C_1268P; regucalcin 21.5 6.1E+02 0.021 25.2 19.0 146 110-296 61-209 (326)
290 3ju4_A Endo-N-acetylneuraminid 21.3 7.7E+02 0.026 26.3 17.1 142 128-277 260-406 (670)
291 3sjl_D Methylamine dehydrogena 21.2 1.4E+02 0.0046 31.8 6.6 69 109-189 291-364 (386)
292 1yfq_A Cell cycle arrest prote 21.1 5.8E+02 0.02 24.8 16.0 60 126-197 33-96 (342)
293 1gen_A Gelatinase A; hydrolase 20.7 5.6E+02 0.019 24.5 16.2 107 109-242 87-202 (218)
294 3fvz_A Peptidyl-glycine alpha- 20.6 6.3E+02 0.021 25.0 23.6 203 75-303 69-283 (329)
No 1
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=100.00 E-value=1.4e-47 Score=401.32 Aligned_cols=225 Identities=44% Similarity=0.802 Sum_probs=207.1
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++.+|++|++.+.+++. ..+.++++++..||++|+++|++||+++++..|++||||||||+.+|+++|+..++++.+
T Consensus 8 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 84 (299)
T 3e7a_A 8 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 84 (299)
T ss_dssp HHHHHHHHHTTTTSCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCC--cccCCCHHHHHHHHHHHHHHHHhCCCeeecCCCEEEEecCCCCHHHHHHHHHHhCCCCCc-
Confidence 68999999998776553 345689999999999999999999999999999999999999999999999999998766
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++|+||+.+|++||+++|.++++||||||.+.++..|||++||..+| +..+|+.+.++|
T Consensus 85 -----~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky----~~~l~~~~~~~f 155 (299)
T 3e7a_A 85 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY----NIKLWKTFTDCF 155 (299)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHS----CHHHHHHHHHHH
T ss_pred -----cEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHh----hHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999 357999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC--cccccCcceEEeehhhhhhhc
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS--TILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~--~~~~~~~~~~~~~~~~~~~~~ 768 (769)
++||+++++++++||||||++|.+.++++|+.+.||.+++..+ +++|||||||..+ .+..+.++.++.||.+...+|
T Consensus 156 ~~LPlaaii~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~-~~~dllWsDP~~~~~~~~~~~RG~~~~fG~~~~~~f 234 (299)
T 3e7a_A 156 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKF 234 (299)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSS-HHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHH
T ss_pred hhCCceEEECCeEEEEcCccCcccCCHHHHHhccCCCcCCcch-hhhhhhcCCccccccCcccCCCCcceeeCHHHHHHH
Confidence 9999999999999999999999999999999999999988776 8999999999853 455566677789999988776
No 2
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=100.00 E-value=8.1e-46 Score=394.30 Aligned_cols=217 Identities=35% Similarity=0.604 Sum_probs=199.7
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++.+++.+.+.+ .|+++++.+||++|++||++||+++++..|++||||||||+.+|+++|+..+.++.+
T Consensus 30 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~- 98 (357)
T 3ll8_A 30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 98 (357)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecccceeeccCCCCHHHHHHHHHhcCCCCCc-
Confidence 578888888764 478999999999999999999999999999999999999999999999999988766
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++|+||+.+|++||++||+++++||||||.+.++..|||++||..+|+ ..+|+.+.++|
T Consensus 99 -----~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~----~~l~~~~~~~f 169 (357)
T 3ll8_A 99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF 169 (357)
T ss_dssp -----CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----EEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhccc----hhHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999993 57999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCCcc-------c--ccCcceEEeeh
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNISTI-------L--RSMVLYIILFS 761 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~~-------~--~~~~~~~~~~~ 761 (769)
++||++++++++++|||||++|.+.++++|+.++||.+++..+ +++|||||||.+... + .+.++.++.||
T Consensus 170 ~~LPlaaii~~~il~vHGGlsp~l~~ld~I~~i~R~~e~p~~g-~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g~~FG 248 (357)
T 3ll8_A 170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYS 248 (357)
T ss_dssp HTSCSEEEETTTEEECSSCCCTTCCSHHHHHTCCCSSCCCSSS-HHHHHHHCEECTTTTSCSCCCSEEECTTTTSSEEEC
T ss_pred HhCCcceEEcccEEEEecCcCcccCCHHHHhhccccccCCccC-chhHhhccCccccccccccccccccCCCCCCceEEC
Confidence 9999999999999999999999999999999999999988777 799999999986532 1 24566778899
Q ss_pred hhhhhhc
Q 004198 762 LKIFISF 768 (769)
Q Consensus 762 ~~~~~~~ 768 (769)
.++..+|
T Consensus 249 ~~~~~~F 255 (357)
T 3ll8_A 249 YPAVCEF 255 (357)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 9988776
No 3
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=100.00 E-value=1.7e-44 Score=380.61 Aligned_cols=222 Identities=29% Similarity=0.503 Sum_probs=202.0
Q ss_pred cchHHHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCC----EEEEccCCCCHHHHHHHHHH
Q 004198 527 PQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFDE 602 (769)
Q Consensus 527 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~----i~viGDiHG~~~~l~~~l~~ 602 (769)
..++++++|+.+.+.+ .|+++++.+||.+|+++|++||++++++.| ++||||||||+.+|+++|+.
T Consensus 12 ~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~~ 81 (315)
T 3h63_A 12 TISFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFEL 81 (315)
T ss_dssp CHHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEEecCCCceEEEEecCCCCHHHHHHHHHH
Confidence 4456789999988763 478999999999999999999999999988 99999999999999999999
Q ss_pred hCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhh
Q 004198 603 YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWA 682 (769)
Q Consensus 603 ~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~ 682 (769)
.++++... .|||||||||||++|+||+.+|++||+++|.++++||||||.+.++..|||.+||..+|+ ..+
T Consensus 82 ~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~~----~~l 152 (315)
T 3h63_A 82 NGLPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYT----AQM 152 (315)
T ss_dssp HCCCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSC----HHH
T ss_pred hCCCCCCC-----EEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccHHHHHHhh----hHH
Confidence 99887652 599999999999999999999999999999999999999999999999999999999994 579
Q ss_pred hHHHhHhhccccceEEEeceEEEEcCCC-CCCCCChHHhhhccCCcccCCCccceeceeccCCCCC-cccccCcceEEee
Q 004198 683 WTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS-TILRSMVLYIILF 760 (769)
Q Consensus 683 ~~~~~~~f~~lP~~~~i~~~i~~vHgGi-~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~-~~~~~~~~~~~~~ 760 (769)
|+.+.++|++||++++++++++|||||+ +|.+.++++|+.++||.+++.++ +++|||||||.+. .+..+.++-++.|
T Consensus 153 ~~~~~~~f~~LPla~ii~~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g-~~~dllWsDP~~~~g~~~s~RG~g~~f 231 (315)
T 3h63_A 153 YELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQPQNGRSISKRGVSCQF 231 (315)
T ss_dssp HHHHHHHHTTSCSEEEETTTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSS-HHHHHHHCEECSSSSEEECTTSSSEEE
T ss_pred HHHHHHHHhcCCcEEEEcCCEEEeCCCCCCcccCCHHHHHhCcccccccccc-hhhhheecCCCCCCCcCcCCCCceEEE
Confidence 9999999999999999999999999999 78899999999999999988776 8999999999864 3445666677889
Q ss_pred hhhhhhhc
Q 004198 761 SLKIFISF 768 (769)
Q Consensus 761 ~~~~~~~~ 768 (769)
|.++..+|
T Consensus 232 g~~~~~~f 239 (315)
T 3h63_A 232 GPDVTKAF 239 (315)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99988776
No 4
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-44 Score=384.23 Aligned_cols=222 Identities=32% Similarity=0.544 Sum_probs=199.8
Q ss_pred cchHHHHHH-HHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCC------EEEEccCCCCHHHHHHH
Q 004198 527 PQGLHKKII-STLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP------VKVFGDLHGQFGDLMRL 599 (769)
Q Consensus 527 ~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~------i~viGDiHG~~~~l~~~ 599 (769)
..++++++| +.|.+.+ .|+++++..||++|+++|++||+++++..| ++||||||||+.+|+++
T Consensus 13 ~~~~~~~~i~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~l 82 (335)
T 3icf_A 13 SQEFISKMVNDLFLKGK----------YLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNL 82 (335)
T ss_dssp CHHHHHHHHHHTGGGTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecCCcccCceEEEEecCCCCHHHHHHH
Confidence 556678888 6665542 588999999999999999999999999999 99999999999999999
Q ss_pred HHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCc
Q 004198 600 FDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDG 679 (769)
Q Consensus 600 l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~ 679 (769)
|+..++++... +|||||||||||++|+||+.+|++||+++|.++++||||||.+.++..|||.+||..+|+
T Consensus 83 l~~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~~---- 153 (335)
T 3icf_A 83 FRKFGKVGPKH-----TYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYS---- 153 (335)
T ss_dssp HHHHCCCBTTE-----EEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----
T ss_pred HHHcCCCCCCc-----EEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccchHhHhhcc----
Confidence 99999886541 699999999999999999999999999999999999999999999999999999999994
Q ss_pred hhhhHHHhHhhccccceEEEeceEEEEcCCC-CCCCCChHHhhhccCCcccCCCccceeceeccCCCCC-cccccCcceE
Q 004198 680 IWAWTRFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS-TILRSMVLYI 757 (769)
Q Consensus 680 ~~~~~~~~~~f~~lP~~~~i~~~i~~vHgGi-~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~-~~~~~~~~~~ 757 (769)
..+|+.+.++|++||+++++++++||||||+ +|.+.++++|+.+.||.+++.++ +++|||||||.+. .+..+.++.+
T Consensus 154 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g-~~~dlLWSDP~~~~g~~~s~RG~g 232 (335)
T 3icf_A 154 QRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG-AFMELLWADPQEANGMGPSQRGLG 232 (335)
T ss_dssp HHHHHHHHHHHTTSCSEEEETTTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECSSSSEEECCCC--
T ss_pred HHHHHHHHHHHhhcceeEEEcCcEEEecCCcCCCccCCHHHHHhCcccccccccc-chhhhhccCCCCcCCcccCCCCCc
Confidence 5799999999999999999999999999999 89999999999999999888776 8999999999864 4455667777
Q ss_pred Eeehhhhhhhc
Q 004198 758 ILFSLKIFISF 768 (769)
Q Consensus 758 ~~~~~~~~~~~ 768 (769)
+.||.++..+|
T Consensus 233 ~~FG~~~~~~f 243 (335)
T 3icf_A 233 HAFGPDITDRF 243 (335)
T ss_dssp EEECHHHHHHH
T ss_pred eeeCHHHHHHH
Confidence 89999988776
No 5
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=100.00 E-value=5.6e-44 Score=380.61 Aligned_cols=225 Identities=44% Similarity=0.802 Sum_probs=203.1
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++++|+.|++.+.+++. ....|+++++..||++|+++|++||+++++..|++||||||||+.+|+++|+..++++.+
T Consensus 9 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 85 (330)
T 1fjm_A 9 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 85 (330)
T ss_dssp HHHHHHHHHHTTTTCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCc--ccCCCCHHHHHHHHHHHHHHHHhCCCeEeecCceEEecCCCCCHHHHHHHHHHhCCCCcc-
Confidence 67889999987655432 234689999999999999999999999999999999999999999999999999998765
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++|+|||.+|++||+.||.++++||||||.+.++..|||.+||..+|+ ..+|+.+.++|
T Consensus 86 -----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~----~~l~~~~~~~f 156 (330)
T 1fjm_A 86 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 156 (330)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----eEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhhhhhhhcc----HHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999984 46899999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC--cccccCcceEEeehhhhhhhc
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS--TILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~--~~~~~~~~~~~~~~~~~~~~~ 768 (769)
++||++++++++++|||||++|.+.+++||+.+.||.+.+..+ +++|+|||||... .+..+.++.+++||.+....|
T Consensus 157 ~~LPl~~~i~~~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g-~~~dlLWsdp~~~~~~w~~~~rG~~~~fG~~~~~~f 235 (330)
T 1fjm_A 157 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKF 235 (330)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCSCHHHHHHCCSSCCCCSSS-HHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHH
T ss_pred HhCCceEEEcCcEEEEccCCCcccCCHHHHhhhhcCccCcccc-hHHHHHhcCCccccCCcCcccCCCceeeChHHHHHH
Confidence 9999999999999999999999999999999999999887665 8899999999753 454556666789999887665
No 6
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=100.00 E-value=3.6e-43 Score=387.00 Aligned_cols=217 Identities=35% Similarity=0.608 Sum_probs=197.3
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++.+++.|.+.+ .|+++++.+||++|.++|++||+++++..|++||||||||+.+|+++|+..+.++.+
T Consensus 43 ~d~l~~~~~~~~----------~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d- 111 (521)
T 1aui_A 43 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 111 (521)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEeeccceeeccCCCCCHHHHHHHHHhcCCCCcc-
Confidence 567888888653 478999999999999999999999999999999999999999999999988887765
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
+|||||||||||++|+|||.+|++||++||.++++||||||.+.++..|||.+||..+|+ ..+|+.+.++|
T Consensus 112 -----~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~----~~l~~~~~~~f 182 (521)
T 1aui_A 112 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS----ERVYDACMDAF 182 (521)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----eEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccHHHHHhhh----hHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999994 57999999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCCc-------cc-c-cCcceEEeeh
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIST-------IL-R-SMVLYIILFS 761 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~-------~~-~-~~~~~~~~~~ 761 (769)
++||++++++++++|||||++|.+.++++|+.++||.+++..+ +++|||||||.... .+ . +.++.++.||
T Consensus 183 ~~LPlaaii~~~il~VHGGlsP~~~sld~I~~I~R~~e~p~~g-~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g~~FG 261 (521)
T 1aui_A 183 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYS 261 (521)
T ss_dssp TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSSEEEC
T ss_pred HhCCceEEecCCceEECCCcCcccCCHHHhhhccCCcCCCccc-hhhhheecCccccccccccCcceecccCCCcccccC
Confidence 9999999999999999999999999999999999999888766 89999999998642 12 1 2456677899
Q ss_pred hhhhhhc
Q 004198 762 LKIFISF 768 (769)
Q Consensus 762 ~~~~~~~ 768 (769)
.++..+|
T Consensus 262 ~d~v~~F 268 (521)
T 1aui_A 262 YPAVCEF 268 (521)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988776
No 7
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=100.00 E-value=7.9e-43 Score=369.74 Aligned_cols=218 Identities=39% Similarity=0.666 Sum_probs=199.5
Q ss_pred HHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCC
Q 004198 531 HKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAG 610 (769)
Q Consensus 531 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~ 610 (769)
++++|+.|.+.+ .|+++++.+||++|+++|++||+++++..|++||||||||+.+|.++|+..+.++..
T Consensus 10 ~~~~i~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~- 78 (309)
T 2ie4_C 10 LDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT- 78 (309)
T ss_dssp HHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTS-
T ss_pred HHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCEEeccCCEEEEecCCCCHHHHHHHHHHcCCCCCC-
Confidence 688899988652 589999999999999999999999999999999999999999999999999987765
Q ss_pred CCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhHHHhHhh
Q 004198 611 DITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWTRFNQLF 690 (769)
Q Consensus 611 ~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f 690 (769)
.|||||||||||++|+||+.+|++||+++|.++++||||||.+.++..|||.+||..+|+.. .+|+.+.++|
T Consensus 79 -----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~---~l~~~~~~~~ 150 (309)
T 2ie4_C 79 -----NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDLF 150 (309)
T ss_dssp -----CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSST---HHHHHHHHHT
T ss_pred -----EEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhHHHHhhcccH---HHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999753 6899999999
Q ss_pred ccccceEEEeceEEEEcCCCCCCCCChHHhhhccCCcccCCCccceeceeccCCCCC-cccccCcceEEeehhhhhhhc
Q 004198 691 NCLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIS-TILRSMVLYIILFSLKIFISF 768 (769)
Q Consensus 691 ~~lP~~~~i~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~-~~~~~~~~~~~~~~~~~~~~~ 768 (769)
++||++++++++++|||||++|.+.++++|+.++|+.+.+..+ .++|+|||||.+. .+..+..+.++.||.+...+|
T Consensus 151 ~~LPl~~~i~~~il~vHgGl~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsdp~~~~~~~~s~RG~g~~fG~~~~~~f 228 (309)
T 2ie4_C 151 DYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETF 228 (309)
T ss_dssp TSSCSCEEETTTEEECSSCCCTTCCSHHHHHTSCCSSCCCSSS-HHHHHHHCEECSSSSEEECTTSSSEEECHHHHHHH
T ss_pred HhCCceEEEcCcEEEECCCCCCcccCHHHHHhhcccccCChhH-HHHHHhhCCCccccccccCCCCcccccCHHHHHHH
Confidence 9999999999999999999999999999999999999887766 7899999999754 444556677788999987766
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=6.3e-39 Score=343.92 Aligned_cols=281 Identities=18% Similarity=0.255 Sum_probs=236.4
Q ss_pred CCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccc
Q 004198 24 EDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAH 103 (769)
Q Consensus 24 ~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~h 103 (769)
.+-|.+|.+|+++.+ +++||+|||.. .. ..+++++||+.+++|++++. .|.+|..|
T Consensus 9 ~~~~~~~~~~~~~~~------~~~i~v~GG~~--~~-------------~~~~~~~~d~~~~~W~~~~~---~p~~r~~~ 64 (308)
T 1zgk_A 9 HSSGLVPRGSHAPKV------GRLIYTAGGYF--RQ-------------SLSYLEAYNPSNGTWLRLAD---LQVPRSGL 64 (308)
T ss_dssp ------------CCC------CCCEEEECCBS--SS-------------BCCCEEEEETTTTEEEECCC---CSSCCBSC
T ss_pred ccCCeeeCCccccCC------CCEEEEEeCcC--CC-------------CcceEEEEcCCCCeEeECCC---CCcccccc
Confidence 456889999999999 89999999982 11 57899999999999999864 58899999
Q ss_pred eEEEECCEEEEECccC---CCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCc
Q 004198 104 AAAAVGTMVVFQGGIG---PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSD 180 (769)
Q Consensus 104 s~~~~~~~Iyv~GG~~---~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~d 180 (769)
+++.+++.||++||.. ......+++|+||+.+ .+|+++ .++|.+|.+|+++++++ .||++||.++...+++
T Consensus 65 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~ 138 (308)
T 1zgk_A 65 AGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMT--NQWSPC---APMSVPRNRIGVGVIDG-HIYAVGGSHGCIHHNS 138 (308)
T ss_dssp EEEEETTEEEEECCEEEETTEEEECCCEEEEETTT--TEEEEC---CCCSSCCBTCEEEEETT-EEEEECCEETTEECCC
T ss_pred eEEEECCEEEEECCCcCCCCCCeecceEEEECCCC--CeEeEC---CCCCcCccccEEEEECC-EEEEEcCCCCCccccc
Confidence 9999999999999974 3445678999999999 779999 47999999999998876 9999999988788999
Q ss_pred eeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCccc
Q 004198 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRY 260 (769)
Q Consensus 181 v~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~ 260 (769)
+++||+.++ +|+.+.++ |.+|..|++++. +++||++||.+... .+++++.||..++ +|..++.+ |.+|.
T Consensus 139 ~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W~~~~~~-p~~r~ 207 (308)
T 1zgk_A 139 VERYEPERD--EWHLVAPM---LTRRIGVGVAVL-NRLLYAVGGFDGTN-RLNSAECYYPERN---EWRMITAM-NTIRS 207 (308)
T ss_dssp EEEEETTTT--EEEECCCC---SSCCBSCEEEEE-TTEEEEECCBCSSC-BCCCEEEEETTTT---EEEECCCC-SSCCB
T ss_pred EEEECCCCC--eEeECCCC---CccccceEEEEE-CCEEEEEeCCCCCC-cCceEEEEeCCCC---eEeeCCCC-CCccc
Confidence 999999999 99999765 788999998875 88999999997664 3899999999887 88888654 78999
Q ss_pred ceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEE
Q 004198 261 QHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRI 340 (769)
Q Consensus 261 ~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~i 340 (769)
.|++++++++|||+||..... ..+++++||+++++|+.+..++. +|..|++++++++|
T Consensus 208 ~~~~~~~~~~iyv~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~~~~i 265 (308)
T 1zgk_A 208 GAGVCVLHNCIYAAGGYDGQD----QLNSVERYDVETETWTFVAPMKH------------------RRSALGITVHQGRI 265 (308)
T ss_dssp SCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECCCCSS------------------CCBSCEEEEETTEE
T ss_pred cceEEEECCEEEEEeCCCCCC----ccceEEEEeCCCCcEEECCCCCC------------------CccceEEEEECCEE
Confidence 999999999999999987543 26889999999999999987644 89999999999999
Q ss_pred EEEcCcCCCccccceEEecCCCCcccc
Q 004198 341 YIYGGLKGDILLDDFLVAENSPFQSDV 367 (769)
Q Consensus 341 yv~GG~~~~~~~~D~~~ld~~~~~~~~ 367 (769)
||+||.++...+++++++|..+.+|..
T Consensus 266 ~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 266 YVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp EEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred EEEcCcCCCcccceEEEEcCCCCEEee
Confidence 999999988889999999998877664
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=8.4e-38 Score=341.93 Aligned_cols=285 Identities=17% Similarity=0.192 Sum_probs=227.8
Q ss_pred cCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECC--CCcEEEecCCCCCC-c
Q 004198 22 TDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVL--TRKWTRIRPAGEPP-S 98 (769)
Q Consensus 22 ~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~--~~~W~~l~~~g~~P-~ 98 (769)
.++++|.+|.+|+++.+ +++||||||.. .+++++||+. +++|+++++. | .
T Consensus 2 ~l~~lP~~r~~~~~~~~------~~~iyv~GG~~------------------~~~~~~~d~~~~~~~W~~~~~~---p~~ 54 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAID------NDTVYIGLGSA------------------GTAWYKLDTQAKDKKWTALAAF---PGG 54 (357)
T ss_dssp CSCCCSSCCCSCEEEEE------TTEEEEECGGG------------------TTCEEEEETTSSSCCEEECCCC---TTC
T ss_pred CCCCCCccccceEEEEE------CCEEEEEeCcC------------------CCeEEEEccccCCCCeeECCCC---CCC
Confidence 46789999999999999 89999999964 2589999998 4999999764 6 7
Q ss_pred ccccceEEEECCEEEEECccC----CCCCCcCcEEEEEccCCcceEEEeeecCCC-CCCccccEEEEECCcEEEEEecCC
Q 004198 99 PRAAHAAAAVGTMVVFQGGIG----PAGHSTDDLYVLDLTNDKFKWHRVVVQGQG-PGPRYGHVMDLVSQRYLVSVSGND 173 (769)
Q Consensus 99 ~R~~hs~~~~~~~Iyv~GG~~----~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~-p~~R~~hs~~~~~~~~l~v~GG~~ 173 (769)
+|.+|++++++++|||+||.+ .....++++|+||+.+ .+|+++. ++ |.+|++|++++.++ +|||+||.+
T Consensus 55 ~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~--~~W~~~~---~~~p~~r~~~~~~~~~~-~iyv~GG~~ 128 (357)
T 2uvk_A 55 PRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT--NSWVKLM---SHAPMGMAGHVTFVHNG-KAYVTGGVN 128 (357)
T ss_dssp CCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTT--TEEEECS---CCCSSCCSSEEEEEETT-EEEEEECCC
T ss_pred cCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCC--CcEEECC---CCCCcccccceEEEECC-EEEEEeCcC
Confidence 899999999999999999982 2345689999999999 7799995 34 59999999988776 999999986
Q ss_pred CC----------------------------------CccCceeEEeCCCCCceEEEcCCCCCCCCcccc-cEEEEecCCE
Q 004198 174 GK----------------------------------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMY-ATASARSDGM 218 (769)
Q Consensus 174 ~~----------------------------------~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~-hsa~~~~~g~ 218 (769)
.. ..++++++||+.++ +|+.+.++ |.+|.. |++++ .+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~---p~~~~~~~~~~~-~~~~ 202 (357)
T 2uvk_A 129 QNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ--QWSYAGES---PWYGTAGAAVVN-KGDK 202 (357)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT--EEEEEEEC---SSCCCBSCEEEE-ETTE
T ss_pred CCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC--cEEECCCC---CCCCcccccEEE-ECCE
Confidence 54 25789999999999 99999654 666666 66554 5889
Q ss_pred EEEEcccCCCCCcccceEEEec--CCCCceEEEeCCCC-CCCcccceEEEEeCCEEEEEecccCCCC-------------
Q 004198 219 FLLCGGRDASGAPLADAYGLLM--HRNGQWEWTLAPGV-APSPRYQHAAVFVGARLHVTGGALRGGR------------- 282 (769)
Q Consensus 219 l~v~GG~~~~~~~l~d~~~ld~--~~~~~W~W~~~~~~-~P~~R~~hs~~~~~~~i~V~GG~~~~~~------------- 282 (769)
||++||.+..+...++++.|+. .++ +|..++.. .|.+|.+|++++++++|||+||....+.
T Consensus 203 iyv~GG~~~~~~~~~~v~~~d~d~~~~---~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~ 279 (357)
T 2uvk_A 203 TWLINGEAKPGLRTDAVFELDFTGNNL---KWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHE 279 (357)
T ss_dssp EEEECCEEETTEECCCEEEEECC---C---EEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTT
T ss_pred EEEEeeecCCCcccCceEEEEecCCCC---cEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccc
Confidence 9999998766666889999986 544 77777654 2445778999999999999999754321
Q ss_pred cccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCC-ccccceEEecCC
Q 004198 283 AIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGD-ILLDDFLVAENS 361 (769)
Q Consensus 283 ~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~-~~~~D~~~ld~~ 361 (769)
......++++||+++++|+.+..++. +|..|+++.++++||||||.+.. ..++|++.|+++
T Consensus 280 ~~~~~~~~~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~ 341 (357)
T 2uvk_A 280 GLKKSYSTDIHLWHNGKWDKSGELSQ------------------GRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVK 341 (357)
T ss_dssp TCCCEECCEEEECC---CEEEEECSS------------------CCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-
T ss_pred cccceeeEEEEecCCCceeeCCCCCC------------------CcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEc
Confidence 11124679999999999999977644 89999999999999999999765 457999998888
Q ss_pred CCccc
Q 004198 362 PFQSD 366 (769)
Q Consensus 362 ~~~~~ 366 (769)
+-++.
T Consensus 342 ~~~~~ 346 (357)
T 2uvk_A 342 DNKVT 346 (357)
T ss_dssp CCSCE
T ss_pred CcEeE
Confidence 76544
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=329.89 Aligned_cols=266 Identities=18% Similarity=0.221 Sum_probs=234.8
Q ss_pred CCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEE
Q 004198 10 APSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTR 89 (769)
Q Consensus 10 ~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~ 89 (769)
.-.||+.+++|...+++|.+|.+|+++.+ +++||+|||.. .. ..+++++||+.+++|++
T Consensus 26 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~------~~~lyv~GG~~--~~-------------~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 26 CRYFNPKDYSWTDIRCPFEKRRDAACVFW------DNVVYILGGSQ--LF-------------PIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp EEEEETTTTEEEECCCCSCCCBSCEEEEE------TTEEEEECCBS--SS-------------BCCEEEEEETTTTEEEE
T ss_pred EEEecCCCCCEecCCCCCcccceeEEEEE------CCEEEEEeCCC--CC-------------CcceEEEEeCCCCeEEE
Confidence 45799999999999999999999999999 89999999987 21 57899999999999999
Q ss_pred ecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEE
Q 004198 90 IRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSV 169 (769)
Q Consensus 90 l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~ 169 (769)
+++ +|.+|..|+++.++++||++||.+.....++++|+||+.+ .+|+.+ +++|.+|.+|+++.+++ .||++
T Consensus 85 ~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iyv~ 155 (306)
T 3ii7_A 85 KLG---PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRT--ESWHTK---PSMLTQRCSHGMVEANG-LIYVC 155 (306)
T ss_dssp EEC---CSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTT--TEEEEE---CCCSSCCBSCEEEEETT-EEEEE
T ss_pred CCC---CCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCC--CceEeC---CCCcCCcceeEEEEECC-EEEEE
Confidence 975 4789999999999999999999875667789999999999 779999 58999999999988876 99999
Q ss_pred ecCCCCCc----cCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCc
Q 004198 170 SGNDGKRV----LSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQ 245 (769)
Q Consensus 170 GG~~~~~~----~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~ 245 (769)
||.++... ++++|+||+.++ +|+.+.++ |.+|..|++++. +++||++||.+.. ..+++++.||..++
T Consensus 156 GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~i~v~GG~~~~-~~~~~~~~yd~~~~-- 226 (306)
T 3ii7_A 156 GGSLGNNVSGRVLNSCEVYDPATE--TWTELCPM---IEARKNHGLVFV-KDKIFAVGGQNGL-GGLDNVEYYDIKLN-- 226 (306)
T ss_dssp CCEESCTTTCEECCCEEEEETTTT--EEEEECCC---SSCCBSCEEEEE-TTEEEEECCEETT-EEBCCEEEEETTTT--
T ss_pred CCCCCCCCcccccceEEEeCCCCC--eEEECCCc---cchhhcceEEEE-CCEEEEEeCCCCC-CCCceEEEeeCCCC--
Confidence 99877655 899999999999 99999765 788999998876 7899999998765 45899999999988
Q ss_pred eEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCc
Q 004198 246 WEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLEL 325 (769)
Q Consensus 246 W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (769)
+|..++.. |.+|..|++++++++|||+||..... ..+++++||+++++|+.+..++.
T Consensus 227 -~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~~~----------------- 283 (306)
T 3ii7_A 227 -EWKMVSPM-PWKGVTVKCAAVGSIVYVLAGFQGVG----RLGHILEYNTETDKWVANSKVRA----------------- 283 (306)
T ss_dssp -EEEECCCC-SCCBSCCEEEEETTEEEEEECBCSSS----BCCEEEEEETTTTEEEEEEEEEC-----------------
T ss_pred -cEEECCCC-CCCccceeEEEECCEEEEEeCcCCCe----eeeeEEEEcCCCCeEEeCCCccc-----------------
Confidence 88888654 78999999999999999999986543 36789999999999999987754
Q ss_pred ccccceEEEEeCC
Q 004198 326 MRRCRHASASIGV 338 (769)
Q Consensus 326 ~~R~~hs~~~~~~ 338 (769)
+|.+|+++++.+
T Consensus 284 -~r~~~~~~~~~~ 295 (306)
T 3ii7_A 284 -FPVTSCLICVVD 295 (306)
T ss_dssp -CSCTTCEEEEEE
T ss_pred -ccceeEEEEECC
Confidence 899999988754
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=327.82 Aligned_cols=269 Identities=18% Similarity=0.263 Sum_probs=231.8
Q ss_pred CCCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 004198 9 PAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (769)
Q Consensus 9 ~~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~ 88 (769)
..-+||+.++.|...+++|.+|.+|+++.+ +++||+|||..... ..+++++||+.+++|+
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~------~~~lyv~GG~~~~~--------------~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGMVYM------AGLVFAVGGFNGSL--------------RVRTVDSYDPVKDQWT 90 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEE------TTEEEEESCBCSSS--------------BCCCEEEEETTTTEEE
T ss_pred cEEEEcCcCCcEeEcccCCcccccceEEEE------CCEEEEEeCcCCCc--------------cccceEEECCCCCcee
Confidence 356899999999999999999999999999 89999999986432 4689999999999999
Q ss_pred EecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEE
Q 004198 89 RIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVS 168 (769)
Q Consensus 89 ~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v 168 (769)
.+++. |.+|..|+++.++++||++||... ...++++|+||+.+ .+|+.+ +++|.+|++|+++++++ .||+
T Consensus 91 ~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iyv 160 (302)
T 2xn4_A 91 SVANM---RDRRSTLGAAVLNGLLYAVGGFDG-STGLSSVEAYNIKS--NEWFHV---APMNTRRSSVGVGVVGG-LLYA 160 (302)
T ss_dssp EECCC---SSCCBSCEEEEETTEEEEEEEECS-SCEEEEEEEEETTT--TEEEEE---CCCSSCCBSCEEEEETT-EEEE
T ss_pred eCCCC---CccccceEEEEECCEEEEEcCCCC-CccCceEEEEeCCC--CeEeec---CCCCCcccCceEEEECC-EEEE
Confidence 99854 789999999999999999999854 34678999999999 779999 58899999999988876 9999
Q ss_pred EecCCCCC--ccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCce
Q 004198 169 VSGNDGKR--VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQW 246 (769)
Q Consensus 169 ~GG~~~~~--~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W 246 (769)
+||.++.. .++++++||+.++ +|+.+..+ |.+|..|++++. +++||++||.+.. ..+++++.||..++
T Consensus 161 ~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~-~~~~~~~~yd~~~~--- 230 (302)
T 2xn4_A 161 VGGYDVASRQCLSTVECYNATTN--EWTYIAEM---STRRSGAGVGVL-NNLLYAVGGHDGP-LVRKSVEVYDPTTN--- 230 (302)
T ss_dssp ECCEETTTTEECCCEEEEETTTT--EEEEECCC---SSCCBSCEEEEE-TTEEEEECCBSSS-SBCCCEEEEETTTT---
T ss_pred EeCCCCCCCccccEEEEEeCCCC--cEEECCCC---ccccccccEEEE-CCEEEEECCCCCC-cccceEEEEeCCCC---
Confidence 99986653 5899999999999 99999765 788999988765 7899999998754 45789999999877
Q ss_pred EEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEecc-CCccCCCCCCCCCCCCCccCc
Q 004198 247 EWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRN-GLVTSSRTSKGHGEHDPSLEL 325 (769)
Q Consensus 247 ~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~-~~~~~~~~~~~~~~~~~~~~~ 325 (769)
+|..++.. |.+|..|+++.++++|||+||..... ..+++++||+++++|+.+. .++
T Consensus 231 ~W~~~~~~-~~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~~~------------------ 287 (302)
T 2xn4_A 231 AWRQVADM-NMCRRNAGVCAVNGLLYVVGGDDGSC----NLASVEYYNPTTDKWTVVSSCMS------------------ 287 (302)
T ss_dssp EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECSSCCS------------------
T ss_pred CEeeCCCC-CCccccCeEEEECCEEEEECCcCCCc----ccccEEEEcCCCCeEEECCcccC------------------
Confidence 77777654 78999999999999999999976533 2678999999999999987 453
Q ss_pred ccccceEEEEeCCEE
Q 004198 326 MRRCRHASASIGVRI 340 (769)
Q Consensus 326 ~~R~~hs~~~~~~~i 340 (769)
.+|..|++++++++|
T Consensus 288 ~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 288 TGRSYAGVTVIDKRL 302 (302)
T ss_dssp SCCBSCEEEEEEC--
T ss_pred cccccceEEEecccC
Confidence 399999999998875
No 12
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.7e-37 Score=326.31 Aligned_cols=267 Identities=19% Similarity=0.270 Sum_probs=232.4
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~ 124 (769)
+++||+|||.... ..+++++||+.+++|++++. .|.+|..|+++.++++||++||.... ..
T Consensus 15 ~~~i~v~GG~~~~---------------~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~-~~ 75 (302)
T 2xn4_A 15 PKLMVVVGGQAPK---------------AIRSVECYDFKEERWHQVAE---LPSRRCRAGMVYMAGLVFAVGGFNGS-LR 75 (302)
T ss_dssp CEEEEEECCBSSS---------------BCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEESCBCSS-SB
T ss_pred CCEEEEECCCCCC---------------CCCcEEEEcCcCCcEeEccc---CCcccccceEEEECCEEEEEeCcCCC-cc
Confidence 6799999997531 46789999999999999964 47899999999999999999998543 46
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPS 204 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~ 204 (769)
.+++|+||+.+ .+|+++ .++|.+|.+|+++++++ .||++||.++...++++|+||+.++ +|+.+.++ |.
T Consensus 76 ~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~---p~ 144 (302)
T 2xn4_A 76 VRTVDSYDPVK--DQWTSV---ANMRDRRSTLGAAVLNG-LLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVAPM---NT 144 (302)
T ss_dssp CCCEEEEETTT--TEEEEE---CCCSSCCBSCEEEEETT-EEEEEEEECSSCEEEEEEEEETTTT--EEEEECCC---SS
T ss_pred ccceEEECCCC--CceeeC---CCCCccccceEEEEECC-EEEEEcCCCCCccCceEEEEeCCCC--eEeecCCC---CC
Confidence 79999999999 779999 47999999999998876 9999999988888999999999999 99999765 78
Q ss_pred cccccEEEEecCCEEEEEcccCCCC-CcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCc
Q 004198 205 ARMYATASARSDGMFLLCGGRDASG-APLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRA 283 (769)
Q Consensus 205 ~r~~hsa~~~~~g~l~v~GG~~~~~-~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~ 283 (769)
+|..|++++. +++||++||.+... ..+++++.||..++ +|..++.. |.+|..|++++++++|||+||.....
T Consensus 145 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~-- 217 (302)
T 2xn4_A 145 RRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTN---EWTYIAEM-STRRSGAGVGVLNNLLYAVGGHDGPL-- 217 (302)
T ss_dssp CCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECCBSSSS--
T ss_pred cccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCC---cEEECCCC-ccccccccEEEECCEEEEECCCCCCc--
Confidence 8999988764 78999999997654 34899999999877 77777554 78999999999999999999976532
Q ss_pred ccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCCCC
Q 004198 284 IEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSPF 363 (769)
Q Consensus 284 ~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~~~ 363 (769)
..+++++||+++++|+.+..++. +|..|+++.++++|||+||.++...+++++++|..+.
T Consensus 218 --~~~~~~~yd~~~~~W~~~~~~~~------------------~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 218 --VRKSVEVYDPTTNAWRQVADMNM------------------CRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp --BCCCEEEEETTTTEEEEECCCSS------------------CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred --ccceEEEEeCCCCCEeeCCCCCC------------------ccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 26789999999999999987744 8999999999999999999988888999999999988
Q ss_pred ccccC
Q 004198 364 QSDVN 368 (769)
Q Consensus 364 ~~~~~ 368 (769)
+|...
T Consensus 278 ~W~~~ 282 (302)
T 2xn4_A 278 KWTVV 282 (302)
T ss_dssp EEEEC
T ss_pred eEEEC
Confidence 77653
No 13
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=8e-37 Score=327.58 Aligned_cols=269 Identities=19% Similarity=0.270 Sum_probs=232.1
Q ss_pred CCCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 004198 9 PAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (769)
Q Consensus 9 ~~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~ 88 (769)
..-.||+.+++|...+++|.+|.+|+++.+ +++||+|||....... ....+++++||+.+++|+
T Consensus 40 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~------~~~lyv~GG~~~~~~~----------~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLADLQVPRSGLAGCVV------GGLLYAVGGRNNSPDG----------NTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEE------TTEEEEECCEEEETTE----------EEECCCEEEEETTTTEEE
T ss_pred eEEEEcCCCCeEeECCCCCcccccceEEEE------CCEEEEECCCcCCCCC----------CeecceEEEECCCCCeEe
Confidence 346799999999999999999999999999 8999999997411000 015789999999999999
Q ss_pred EecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEE
Q 004198 89 RIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVS 168 (769)
Q Consensus 89 ~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v 168 (769)
+++++ |.+|..|+++.++++||++||.... ..++++++||+.+ .+|+.+ .++|.+|++|+++++++ .||+
T Consensus 104 ~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iyv 173 (308)
T 1zgk_A 104 PCAPM---SVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPER--DEWHLV---APMLTRRIGVGVAVLNR-LLYA 173 (308)
T ss_dssp ECCCC---SSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTT--TEEEEC---CCCSSCCBSCEEEEETT-EEEE
T ss_pred ECCCC---CcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCC--CeEeEC---CCCCccccceEEEEECC-EEEE
Confidence 98754 7899999999999999999997543 4578999999999 779999 47899999999998875 9999
Q ss_pred EecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEE
Q 004198 169 VSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEW 248 (769)
Q Consensus 169 ~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W 248 (769)
+||.++...++++++||+.++ +|+.+..+ |.+|..|++++. +++||++||.+.. ..+++++.||+.++ +|
T Consensus 174 ~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~-~~~~~v~~yd~~~~---~W 243 (308)
T 1zgk_A 174 VGGFDGTNRLNSAECYYPERN--EWRMITAM---NTIRSGAGVCVL-HNCIYAAGGYDGQ-DQLNSVERYDVETE---TW 243 (308)
T ss_dssp ECCBCSSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEEEE-TTEEEEECCBCSS-SBCCCEEEEETTTT---EE
T ss_pred EeCCCCCCcCceEEEEeCCCC--eEeeCCCC---CCccccceEEEE-CCEEEEEeCCCCC-CccceEEEEeCCCC---cE
Confidence 999988878999999999999 99999765 788999988865 8899999999754 34899999999987 88
Q ss_pred EeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccc
Q 004198 249 TLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRR 328 (769)
Q Consensus 249 ~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R 328 (769)
..++.. |.+|..|++++++++|||+||..... ..+++++||+++++|+.+..++. +|
T Consensus 244 ~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~p~------------------~r 300 (308)
T 1zgk_A 244 TFVAPM-KHRRSALGITVHQGRIYVLGGYDGHT----FLDSVECYDPDTDTWSEVTRMTS------------------GR 300 (308)
T ss_dssp EECCCC-SSCCBSCEEEEETTEEEEECCBCSSC----BCCEEEEEETTTTEEEEEEECSS------------------CC
T ss_pred EECCCC-CCCccceEEEEECCEEEEEcCcCCCc----ccceEEEEcCCCCEEeecCCCCC------------------Cc
Confidence 888754 79999999999999999999976533 36789999999999999987754 99
Q ss_pred cceEEEEe
Q 004198 329 CRHASASI 336 (769)
Q Consensus 329 ~~hs~~~~ 336 (769)
+.|+++++
T Consensus 301 ~~~~~~~l 308 (308)
T 1zgk_A 301 SGVGVAVT 308 (308)
T ss_dssp BSCEEEEC
T ss_pred ccceeEeC
Confidence 99999864
No 14
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=324.97 Aligned_cols=264 Identities=19% Similarity=0.258 Sum_probs=231.4
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~ 124 (769)
.+.||+|||... .+++++||+.+++|++++. +|.+|.+|+++.+++.||++||.. ...
T Consensus 11 ~~~l~~~GG~~~-----------------~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~--~~~ 68 (306)
T 3ii7_A 11 HDYRIALFGGSQ-----------------PQSCRYFNPKDYSWTDIRC---PFEKRRDAACVFWDNVVYILGGSQ--LFP 68 (306)
T ss_dssp CCEEEEEECCSS-----------------TTSEEEEETTTTEEEECCC---CSCCCBSCEEEEETTEEEEECCBS--SSB
T ss_pred cceEEEEeCCCC-----------------CceEEEecCCCCCEecCCC---CCcccceeEEEEECCEEEEEeCCC--CCC
Confidence 468999999653 4789999999999999875 478999999999999999999986 567
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCC-CCCccCceeEEeCCCCCceEEEcCCCCCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGND-GKRVLSDAWALDTAQKPYVWQRLNPEGDRP 203 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~-~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P 203 (769)
++++|+||+.+ .+|+.+. ++|.+|.+|+++++++ .||++||.+ +...++++|+||+.++ +|+++.++ |
T Consensus 69 ~~~~~~~d~~~--~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~~~---p 137 (306)
T 3ii7_A 69 IKRMDCYNVVK--DSWYSKL---GPPTPRDSLAACAAEG-KIYTSGGSEVGNSALYLFECYDTRTE--SWHTKPSM---L 137 (306)
T ss_dssp CCEEEEEETTT--TEEEEEE---CCSSCCBSCEEEEETT-EEEEECCBBTTBSCCCCEEEEETTTT--EEEEECCC---S
T ss_pred cceEEEEeCCC--CeEEECC---CCCccccceeEEEECC-EEEEECCCCCCCcEeeeEEEEeCCCC--ceEeCCCC---c
Confidence 89999999999 7799994 7999999999998876 899999987 6778999999999999 99999665 7
Q ss_pred CcccccEEEEecCCEEEEEcccCCCCCc---ccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCC
Q 004198 204 SARMYATASARSDGMFLLCGGRDASGAP---LADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRG 280 (769)
Q Consensus 204 ~~r~~hsa~~~~~g~l~v~GG~~~~~~~---l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~ 280 (769)
.+|..|+++.. +++||++||....... +++++.||..++ +|..++.. |.+|.+|++++++++|||+||....
T Consensus 138 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~ 212 (306)
T 3ii7_A 138 TQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATE---TWTELCPM-IEARKNHGLVFVKDKIFAVGGQNGL 212 (306)
T ss_dssp SCCBSCEEEEE-TTEEEEECCEESCTTTCEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECCEETT
T ss_pred CCcceeEEEEE-CCEEEEECCCCCCCCcccccceEEEeCCCCC---eEEECCCc-cchhhcceEEEECCEEEEEeCCCCC
Confidence 88999988864 7899999998765442 899999999987 78777654 7899999999999999999998654
Q ss_pred CCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecC
Q 004198 281 GRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAEN 360 (769)
Q Consensus 281 ~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~ 360 (769)
. ..+++++||+++++|+.+..++. +|..|++++++++|||+||.++...+++++.+|.
T Consensus 213 ~----~~~~~~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 213 G----GLDNVEYYDIKLNEWKMVSPMPW------------------KGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp E----EBCCEEEEETTTTEEEECCCCSC------------------CBSCCEEEEETTEEEEEECBCSSSBCCEEEEEET
T ss_pred C----CCceEEEeeCCCCcEEECCCCCC------------------CccceeEEEECCEEEEEeCcCCCeeeeeEEEEcC
Confidence 2 26789999999999999987644 8999999999999999999998888999999999
Q ss_pred CCCccccC
Q 004198 361 SPFQSDVN 368 (769)
Q Consensus 361 ~~~~~~~~ 368 (769)
.+.+|...
T Consensus 271 ~~~~W~~~ 278 (306)
T 3ii7_A 271 ETDKWVAN 278 (306)
T ss_dssp TTTEEEEE
T ss_pred CCCeEEeC
Confidence 98777643
No 15
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=8.5e-38 Score=336.12 Aligned_cols=280 Identities=18% Similarity=0.254 Sum_probs=234.3
Q ss_pred CCcccccceeecCCCC--CCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 004198 11 PSYRTLETYWDTDEDA--PGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (769)
Q Consensus 11 ~~y~~~~~~w~~~~~~--P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~ 88 (769)
-.||+.+++|.. +++ |.||.+|+++.+ +++||++||........ .....+++++||+.+++|+
T Consensus 16 ~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~--------~~~~~~~~~~~d~~~~~W~ 80 (315)
T 4asc_A 16 VAYDPAANECYC-ASLSSQVPKNHVSLVTK------ENQVFVAGGLFYNEDNK--------EDPMSAYFLQFDHLDSEWL 80 (315)
T ss_dssp EEEETTTTEEEE-EECCCCSCSSEEEEECT------TCCEEEEEEEEECSSCS--------SSCEEEEEEEEETTTTEEE
T ss_pred EEECCCCCeEec-CCCCCCCCccceEEEEE------CCEEEEEcCcccCCCCC--------ccccccceEEecCCCCeEE
Confidence 479999999987 556 458999999998 89999999974222111 0114677999999999999
Q ss_pred EecCCCCCCcccccceEEEECCEEEEECccC--CCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEE
Q 004198 89 RIRPAGEPPSPRAAHAAAAVGTMVVFQGGIG--PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYL 166 (769)
Q Consensus 89 ~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~--~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l 166 (769)
++++ .|.+|..|+++.++++||++||.. .....++++|+||+.+ .+|+++ +++|.+|++|+++++++ +|
T Consensus 81 ~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~i 151 (315)
T 4asc_A 81 GMPP---LPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLS--FKWGES---DPLPYVVYGHTVLSHMD-LV 151 (315)
T ss_dssp ECCC---BSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTT--TEEEEC---CCCSSCCBSCEEEEETT-EE
T ss_pred ECCC---CCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCC--CcEeEC---CCCCCcccceeEEEECC-EE
Confidence 9875 478999999999999999999975 3466789999999999 779999 57999999999998887 89
Q ss_pred EEEecC-CCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCc
Q 004198 167 VSVSGN-DGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQ 245 (769)
Q Consensus 167 ~v~GG~-~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~ 245 (769)
|++||. +....++++|+||+.++ +|+.+.++ |.+|..|++++. +++||++||.+..+ .+++++.||..++
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~~-~~~~~~~yd~~~~-- 222 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKKF--EWKELAPM---QTARSLFGATVH-DGRIIVAAGVTDTG-LTSSAEVYSITDN-- 222 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTTT--EEEECCCC---SSCCBSCEEEEE-TTEEEEEEEECSSS-EEEEEEEEETTTT--
T ss_pred EEEeCCCCCCcccceEEEEeCCCC--eEEECCCC---CCchhceEEEEE-CCEEEEEeccCCCC-ccceEEEEECCCC--
Confidence 999998 66678999999999999 99999765 789999998865 77999999987653 5889999999877
Q ss_pred eEEEeCCCCCCCcccceEEEEeCCEEEEEecccCC----CC-cccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCC
Q 004198 246 WEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRG----GR-AIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHD 320 (769)
Q Consensus 246 W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~----~~-~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~ 320 (769)
+|..++. .|.+|..|+++.++++|||+||.... +. .....+++++||+++++|+.+..
T Consensus 223 -~W~~~~~-~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~--------------- 285 (315)
T 4asc_A 223 -KWAPFEA-FPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLR--------------- 285 (315)
T ss_dssp -EEEEECC-CSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEES---------------
T ss_pred -eEEECCC-CCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhcc---------------
Confidence 7877765 47999999999999999999998531 11 01236789999999999999822
Q ss_pred CccCcccccceEEEEeCCEEEEEcC
Q 004198 321 PSLELMRRCRHASASIGVRIYIYGG 345 (769)
Q Consensus 321 ~~~~~~~R~~hs~~~~~~~iyv~GG 345 (769)
.+|..|++++++++|||+..
T Consensus 286 -----~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 286 -----EIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp -----CSSCCSSCEEEEEEECGGGS
T ss_pred -----CCcCccceEEeCCEEEEEEe
Confidence 28999999999999999876
No 16
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=323.31 Aligned_cols=267 Identities=19% Similarity=0.259 Sum_probs=232.2
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~ 124 (769)
+++||+|||...... ..+++++||+.+++|+.++. .|.+|.+|+++.+++.||++||.. ....
T Consensus 14 ~~~i~~~GG~~~~~~-------------~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~l~v~GG~~-~~~~ 76 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQS-------------PIDVVEKYDPKTQEWSFLPS---ITRKRRYVASVSLHDRIYVIGGYD-GRSR 76 (301)
T ss_dssp CEEEEEECCEETTTE-------------ECCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCBC-SSCB
T ss_pred CCEEEEEeCccCCCc-------------ceeEEEEEcCCCCeEEeCCC---CChhhccccEEEECCEEEEEcCCC-CCcc
Confidence 779999999433221 57899999999999999875 478999999999999999999986 4457
Q ss_pred cCcEEEEEccCCcce---EEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCC
Q 004198 125 TDDLYVLDLTNDKFK---WHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGD 201 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~---W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~ 201 (769)
.+++|+||+.+ .+ |+.+ +++|.+|.+|+++++++ ++|++||.++...++++|+||+.++ +|+.+.++
T Consensus 77 ~~~~~~~d~~~--~~~~~W~~~---~~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~-- 146 (301)
T 2vpj_A 77 LSSVECLDYTA--DEDGVWYSV---APMNVRRGLAGATTLGD-MIYVSGGFDGSRRHTSMERYDPNID--QWSMLGDM-- 146 (301)
T ss_dssp CCCEEEEETTC--CTTCCCEEE---CCCSSCCBSCEEEEETT-EEEEECCBCSSCBCCEEEEEETTTT--EEEEEEEC--
T ss_pred CceEEEEECCC--CCCCeeEEC---CCCCCCccceeEEEECC-EEEEEcccCCCcccceEEEEcCCCC--eEEECCCC--
Confidence 89999999999 77 9999 58999999999998876 9999999998888999999999999 99999765
Q ss_pred CCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCC
Q 004198 202 RPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGG 281 (769)
Q Consensus 202 ~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~ 281 (769)
|.+|..|++++. +++||++||.+... .+++++.||..++ +|..++.. |.+|..|+++.++++|||+||.....
T Consensus 147 -p~~r~~~~~~~~-~~~iyv~GG~~~~~-~~~~~~~~d~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 147 -QTAREGAGLVVA-SGVIYCLGGYDGLN-ILNSVEKYDPHTG---HWTNVTPM-ATKRSGAGVALLNDHIYVVGGFDGTA 219 (301)
T ss_dssp -SSCCBSCEEEEE-TTEEEEECCBCSSC-BCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS
T ss_pred -CCCcccceEEEE-CCEEEEECCCCCCc-ccceEEEEeCCCC---cEEeCCCC-CcccccceEEEECCEEEEEeCCCCCc
Confidence 788999988865 78999999987653 6899999999877 77777544 78999999999999999999986543
Q ss_pred CcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCC
Q 004198 282 RAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENS 361 (769)
Q Consensus 282 ~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~ 361 (769)
. .+++++||+++++|+.+..++. +|..|++++++++|||+||.++...+++++.+|.+
T Consensus 220 ~----~~~v~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 220 H----LSSVEAYNIRTDSWTTVTSMTT------------------PRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp B----CCCEEEEETTTTEEEEECCCSS------------------CCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETT
T ss_pred c----cceEEEEeCCCCcEEECCCCCC------------------cccceeEEEECCEEEEEcCcCCCcccccEEEEcCC
Confidence 2 6789999999999999987644 89999999999999999999988888999999998
Q ss_pred CCcccc
Q 004198 362 PFQSDV 367 (769)
Q Consensus 362 ~~~~~~ 367 (769)
+.++..
T Consensus 278 ~~~W~~ 283 (301)
T 2vpj_A 278 IDSWEV 283 (301)
T ss_dssp TTEEEE
T ss_pred CCeEEE
Confidence 877654
No 17
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=320.41 Aligned_cols=266 Identities=18% Similarity=0.286 Sum_probs=232.2
Q ss_pred CCCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCc--
Q 004198 9 PAPSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK-- 86 (769)
Q Consensus 9 ~~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~-- 86 (769)
..-.||+.+++|...+++|.+|.+|+++.+ +++||+|||..... ..+++++||+.+++
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~------~~~l~v~GG~~~~~--------------~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYVASVSL------HDRIYVIGGYDGRS--------------RLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEE------TTEEEEECCBCSSC--------------BCCCEEEEETTCCTTC
T ss_pred EEEEEcCCCCeEEeCCCCChhhccccEEEE------CCEEEEEcCCCCCc--------------cCceEEEEECCCCCCC
Confidence 445799999999999999999999999999 89999999986322 57899999999999
Q ss_pred -EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcE
Q 004198 87 -WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRY 165 (769)
Q Consensus 87 -W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~ 165 (769)
|+++++ .|.+|..|+++.++++||++||.... ..++++++||+.+ .+|+.+. ++|.+|.+|+++++++ .
T Consensus 92 ~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~--~~W~~~~---~~p~~r~~~~~~~~~~-~ 161 (301)
T 2vpj_A 92 VWYSVAP---MNVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNI--DQWSMLG---DMQTAREGAGLVVASG-V 161 (301)
T ss_dssp CCEEECC---CSSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTT--TEEEEEE---ECSSCCBSCEEEEETT-E
T ss_pred eeEECCC---CCCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCC--CeEEECC---CCCCCcccceEEEECC-E
Confidence 999965 47899999999999999999998643 4588999999999 7799995 6899999999988876 8
Q ss_pred EEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCc
Q 004198 166 LVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQ 245 (769)
Q Consensus 166 l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~ 245 (769)
||++||.++...++++++||+.++ +|+.+.++ |.+|..|+++.. +++||++||.+... .+++++.||..++
T Consensus 162 iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~i~v~GG~~~~~-~~~~v~~yd~~~~-- 232 (301)
T 2vpj_A 162 IYCLGGYDGLNILNSVEKYDPHTG--HWTNVTPM---ATKRSGAGVALL-NDHIYVVGGFDGTA-HLSSVEAYNIRTD-- 232 (301)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEEEEE-TTEEEEECCBCSSS-BCCCEEEEETTTT--
T ss_pred EEEECCCCCCcccceEEEEeCCCC--cEEeCCCC---CcccccceEEEE-CCEEEEEeCCCCCc-ccceEEEEeCCCC--
Confidence 999999988888999999999999 99999655 888998888865 78999999987653 4899999999877
Q ss_pred eEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCc
Q 004198 246 WEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLEL 325 (769)
Q Consensus 246 W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (769)
+|..++.. |.+|..|++++++++|||+||..... ..+++++||+++++|+.+..++.
T Consensus 233 -~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~~~----------------- 289 (301)
T 2vpj_A 233 -SWTTVTSM-TTPRCYVGATVLRGRLYAIAGYDGNS----LLSSIECYDPIIDSWEVVTSMGT----------------- 289 (301)
T ss_dssp -EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BEEEEEEEETTTTEEEEEEEEEE-----------------
T ss_pred -cEEECCCC-CCcccceeEEEECCEEEEEcCcCCCc----ccccEEEEcCCCCeEEEcCCCCc-----------------
Confidence 77777654 78999999999999999999976543 25789999999999999988754
Q ss_pred ccccceEEEEeC
Q 004198 326 MRRCRHASASIG 337 (769)
Q Consensus 326 ~~R~~hs~~~~~ 337 (769)
+|+.|+++++.
T Consensus 290 -~r~~~~~~~~~ 300 (301)
T 2vpj_A 290 -QRCDAGVCVLR 300 (301)
T ss_dssp -EEESCEEEEEE
T ss_pred -ccccceEEEeC
Confidence 99999999874
No 18
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=100.00 E-value=3.3e-37 Score=350.95 Aligned_cols=221 Identities=29% Similarity=0.515 Sum_probs=197.3
Q ss_pred hHHHHHHHHHhCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCceeeecCC----EEEEccCCCCHHHHHHHHHHhC
Q 004198 529 GLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLRAP----VKVFGDLHGQFGDLMRLFDEYG 604 (769)
Q Consensus 529 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~l~~~~~----i~viGDiHG~~~~l~~~l~~~~ 604 (769)
..+++++..+.+.+ .+++.++..||.++.++|++||++++++.| ++||||||||+.+|.++|+..+
T Consensus 167 ~~l~~lie~l~~~~----------~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~~~ 236 (477)
T 1wao_1 167 SFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNG 236 (477)
T ss_dssp HHHHHHHHHHHTCC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHccCCCeEEeecCCCcceEEEeCCCCCHHHHHHHHHHcC
Confidence 45678888887643 478999999999999999999999999988 9999999999999999999999
Q ss_pred CCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhhhccCCHHHHHHHhCCCCchhhhH
Q 004198 605 FPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGENDGIWAWT 684 (769)
Q Consensus 605 ~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~~~~g~~~e~~~~~~~~~~~~~~~ 684 (769)
.++..+ .|||||||||||++|+||+.+|++||+++|.+|++||||||.+.++..|||..||..+|+. .+|+
T Consensus 237 ~~~~~~-----~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~----~~~~ 307 (477)
T 1wao_1 237 LPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QMYE 307 (477)
T ss_dssp CCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCT----THHH
T ss_pred CCCCcC-----eEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHHHHHHHhhH----HHHH
Confidence 886542 5999999999999999999999999999999999999999999999999999999999954 6999
Q ss_pred HHhHhhccccceEEEeceEEEEcCCC-CCCCCChHHhhhccCCcccCCCccceeceeccCCCCCc-ccccCcceEEeehh
Q 004198 685 RFNQLFNCLPLAALIEKKIICMHGGI-GRSIHSVEQIEKLERPITMDAGSIILMDLLWFVLNIST-ILRSMVLYIILFSL 762 (769)
Q Consensus 685 ~~~~~f~~lP~~~~i~~~i~~vHgGi-~~~~~~~~~i~~~~rp~~~~~~~~~~~dllWsdp~~~~-~~~~~~~~~~~~~~ 762 (769)
.+.++|++||++++++++++|||||+ +|...++++|+.+.||.+++.++ +++|+|||||.... +..+..+.+++||.
T Consensus 308 ~~~~~~~~lp~~~~~~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~-~~~dllWsdp~~~~~~~~~~rg~~~~fg~ 386 (477)
T 1wao_1 308 LFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQPQNGRSISKRGVSCQFGP 386 (477)
T ss_dssp HHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECSSSSCEECTTSSSEEECH
T ss_pred HHHHHhccCCcEEEEcCcEEEECCCCCccccCCHHHHHhccCCCCCchhh-hhhhhccCCCCccCCcCcCCCCCceeECH
Confidence 99999999999999999999999999 78888999999999998887665 89999999998653 33344566778999
Q ss_pred hhhhhcC
Q 004198 763 KIFISFI 769 (769)
Q Consensus 763 ~~~~~~~ 769 (769)
+...+|+
T Consensus 387 ~~~~~fl 393 (477)
T 1wao_1 387 DVTKAFL 393 (477)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9877763
No 19
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-36 Score=327.37 Aligned_cols=281 Identities=17% Similarity=0.277 Sum_probs=230.7
Q ss_pred CCCcccccceeecCC-CCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE
Q 004198 10 APSYRTLETYWDTDE-DAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT 88 (769)
Q Consensus 10 ~~~y~~~~~~w~~~~-~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~ 88 (769)
..+||+.+++|...+ +.|.||.+|+++.+ +++||+|||........ .....+++++||+.+++|+
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~------~~~lyv~GG~~~~~~~~--------~~~~~~~~~~~d~~~~~W~ 91 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQ------QNQVYVVGGLYVDEENK--------DQPLQSYFFQLDNVSSEWV 91 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECS------SSCEEEEESSCC---------------CCCBEEEEEETTTTEEE
T ss_pred eEEECCCCCceecccCCccCCccceEEEEE------CCEEEEECCcccCcccc--------CCCccccEEEEeCCCCcEE
Confidence 357999999999832 22478999999988 89999999965322110 0013467999999999999
Q ss_pred EecCCCCCCcccccceEEEECCEEEEECccCC-CCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEE
Q 004198 89 RIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP-AGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLV 167 (769)
Q Consensus 89 ~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~-~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~ 167 (769)
++++ .|.+|..|+++.++++||++||... ....++++|+||+.+ .+|+.+ +++|.+|++|++++.++ .||
T Consensus 92 ~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iy 162 (318)
T 2woz_A 92 GLPP---LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVA--AKWSEV---KNLPIKVYGHNVISHNG-MIY 162 (318)
T ss_dssp ECSC---BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTT--TEEEEE---CCCSSCEESCEEEEETT-EEE
T ss_pred ECCC---CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCC--CCEeEC---CCCCCcccccEEEEECC-EEE
Confidence 9865 4789999999999999999999863 556789999999999 779999 58999999999988776 999
Q ss_pred EEecCC-CCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCce
Q 004198 168 SVSGND-GKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQW 246 (769)
Q Consensus 168 v~GG~~-~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W 246 (769)
++||.+ ....++++|+||+.++ +|+.+.++ |.+|..|++++. +++||++||.+..+ .+++++.||..++
T Consensus 163 v~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~~-~~~iyv~GG~~~~~-~~~~~~~yd~~~~--- 232 (318)
T 2woz_A 163 CLGGKTDDKKCTNRVFIYNPKKG--DWKDLAPM---KTPRSMFGVAIH-KGKIVIAGGVTEDG-LSASVEAFDLKTN--- 232 (318)
T ss_dssp EECCEESSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEEEEE-TTEEEEEEEEETTE-EEEEEEEEETTTC---
T ss_pred EEcCCCCCCCccceEEEEcCCCC--EEEECCCC---CCCcccceEEEE-CCEEEEEcCcCCCC-ccceEEEEECCCC---
Confidence 999974 4557899999999999 99999765 788999988764 78999999987653 5789999999877
Q ss_pred EEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCc-----ccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCC
Q 004198 247 EWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRA-----IEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDP 321 (769)
Q Consensus 247 ~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~-----~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~ 321 (769)
+|..++.. |.+|..|+++.++++|||+||....... ....+++++||+++++|+.+ ++.
T Consensus 233 ~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~------------- 296 (318)
T 2woz_A 233 KWEVMTEF-PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKE------------- 296 (318)
T ss_dssp CEEECCCC-SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESC-------------
T ss_pred eEEECCCC-CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--ccc-------------
Confidence 78887654 7899999999999999999998642110 12367899999999999998 322
Q ss_pred ccCcccccceEEEEeCCEEEEEc
Q 004198 322 SLELMRRCRHASASIGVRIYIYG 344 (769)
Q Consensus 322 ~~~~~~R~~hs~~~~~~~iyv~G 344 (769)
+|+.|++++++++|||+.
T Consensus 297 -----~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 297 -----IRYASGASCLATRLNLFK 314 (318)
T ss_dssp -----CGGGTTCEEEEEEEEGGG
T ss_pred -----ccccccceeeCCEEEEEE
Confidence 899999999999999975
No 20
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=317.36 Aligned_cols=263 Identities=16% Similarity=0.214 Sum_probs=224.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECcc-----C
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGI-----G 119 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~-----~ 119 (769)
.+.||+||| +++++||+.+++|+..+ . ..|.+|.+|+++.++++||++||. +
T Consensus 4 ~~~l~~~GG---------------------~~~~~yd~~~~~W~~~~-~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 60 (315)
T 4asc_A 4 QDLIFMISE---------------------EGAVAYDPAANECYCAS-L-SSQVPKNHVSLVTKENQVFVAGGLFYNEDN 60 (315)
T ss_dssp EEEEEEEET---------------------TEEEEEETTTTEEEEEE-C-CCCSCSSEEEEECTTCCEEEEEEEEECSSC
T ss_pred ceEEEEEcC---------------------CceEEECCCCCeEecCC-C-CCCCCccceEEEEECCEEEEEcCcccCCCC
Confidence 457999999 26999999999999732 2 236789999999999999999996 2
Q ss_pred CCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCC---CCCccCceeEEeCCCCCceEEEc
Q 004198 120 PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGND---GKRVLSDAWALDTAQKPYVWQRL 196 (769)
Q Consensus 120 ~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~---~~~~~~dv~~~d~~~~~~~W~~v 196 (769)
......+++|+||+.+ .+|+.+ +++|.+|.+|+++++++ .||++||.+ +...++++|+||+.++ +|+++
T Consensus 61 ~~~~~~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~ 132 (315)
T 4asc_A 61 KEDPMSAYFLQFDHLD--SEWLGM---PPLPSPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSF--KWGES 132 (315)
T ss_dssp SSSCEEEEEEEEETTT--TEEEEC---CCBSSCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTT--EEEEC
T ss_pred CccccccceEEecCCC--CeEEEC---CCCCcchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCC--cEeEC
Confidence 2334457799999999 779998 58999999999998876 999999964 4668899999999999 99999
Q ss_pred CCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEec
Q 004198 197 NPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGG 276 (769)
Q Consensus 197 ~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG 276 (769)
.++ |.+|..|++++ .+++||++||.+.....+++++.||..++ +|..++.+ |.+|..|++++++++|||+||
T Consensus 133 ~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG 204 (315)
T 4asc_A 133 DPL---PYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKF---EWKELAPM-QTARSLFGATVHDGRIIVAAG 204 (315)
T ss_dssp CCC---SSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTT---EEEECCCC-SSCCBSCEEEEETTEEEEEEE
T ss_pred CCC---CCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCC---eEEECCCC-CCchhceEEEEECCEEEEEec
Confidence 765 88899998887 57799999999666677999999999987 88888765 789999999999999999999
Q ss_pred ccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCC-------
Q 004198 277 ALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGD------- 349 (769)
Q Consensus 277 ~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~------- 349 (769)
..... ..+++++||+++++|+.+..++. +|..|++++++++|||+||.++.
T Consensus 205 ~~~~~----~~~~~~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~ 262 (315)
T 4asc_A 205 VTDTG----LTSSAEVYSITDNKWAPFEAFPQ------------------ERSSLSLVSLVGTLYAIGGFATLETESGEL 262 (315)
T ss_dssp ECSSS----EEEEEEEEETTTTEEEEECCCSS------------------CCBSCEEEEETTEEEEEEEEEEEECTTSCE
T ss_pred cCCCC----ccceEEEEECCCCeEEECCCCCC------------------cccceeEEEECCEEEEECCccccCcCCccc
Confidence 86543 25789999999999999987644 89999999999999999998542
Q ss_pred --ccccceEEecCCCCccccC
Q 004198 350 --ILLDDFLVAENSPFQSDVN 368 (769)
Q Consensus 350 --~~~~D~~~ld~~~~~~~~~ 368 (769)
..++|+|++|.++.+|...
T Consensus 263 ~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 263 VPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEEEEEEEEEEETTTTEEEEE
T ss_pred cccccCcEEEecCCCChhhhh
Confidence 4689999999988777643
No 21
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=5.4e-35 Score=314.65 Aligned_cols=271 Identities=17% Similarity=0.239 Sum_probs=226.9
Q ss_pred CCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEE
Q 004198 28 GPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA 107 (769)
Q Consensus 28 ~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~ 107 (769)
.||.++... +.||+|||. ++++||+.+++|...+. ..|.+|..|+++.
T Consensus 7 ~~r~~~~~~---------~~i~~~GG~---------------------~~~~yd~~~~~W~~~~~--~~~~~r~~~~~~~ 54 (318)
T 2woz_A 7 IPRHGMFVK---------DLILLVNDT---------------------AAVAYDPMENECYLTAL--AEQIPRNHSSIVT 54 (318)
T ss_dssp SCCCCCSEE---------EEEEEECSS---------------------EEEEEETTTTEEEEEEE--CTTSCSSEEEEEC
T ss_pred cccccceec---------chhhhcccc---------------------ceEEECCCCCceecccC--CccCCccceEEEE
Confidence 567666543 379999992 37899999999998542 2457899999999
Q ss_pred ECCEEEEECccCC--C---CCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCC--CCCccCc
Q 004198 108 VGTMVVFQGGIGP--A---GHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGND--GKRVLSD 180 (769)
Q Consensus 108 ~~~~Iyv~GG~~~--~---~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~--~~~~~~d 180 (769)
+++.||++||... . ....+++|+||+.+ .+|+++ +++|.+|.+|+++++++ .||++||.+ +...+++
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~--~~W~~~---~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~ 128 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVS--SEWVGL---PPLPSARCLFGLGEVDD-KIYVVAGKDLQTEASLDS 128 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTT--TEEEEC---SCBSSCBCSCEEEEETT-EEEEEEEEBTTTCCEEEE
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCC--CcEEEC---CCCCccccccceEEECC-EEEEEcCccCCCCcccce
Confidence 9999999999531 1 12345699999999 779999 58999999999998876 999999985 4567899
Q ss_pred eeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCccc
Q 004198 181 AWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRY 260 (769)
Q Consensus 181 v~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~ 260 (769)
+|+||+.++ +|+++.++ |.+|..|++++ .+++||++||.......+++++.||..++ +|..++.. |.+|.
T Consensus 129 ~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~ 198 (318)
T 2woz_A 129 VLCYDPVAA--KWSEVKNL---PIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKG---DWKDLAPM-KTPRS 198 (318)
T ss_dssp EEEEETTTT--EEEEECCC---SSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTT---EEEEECCC-SSCCB
T ss_pred EEEEeCCCC--CEeECCCC---CCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCC---EEEECCCC-CCCcc
Confidence 999999999 99999765 78899999887 68899999999766667899999999977 77777654 79999
Q ss_pred ceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEE
Q 004198 261 QHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRI 340 (769)
Q Consensus 261 ~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~i 340 (769)
.|++++++++|||+||..... ..+++++||+++++|+.+..++. +|..|++++++++|
T Consensus 199 ~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~p~------------------~r~~~~~~~~~~~i 256 (318)
T 2woz_A 199 MFGVAIHKGKIVIAGGVTEDG----LSASVEAFDLKTNKWEVMTEFPQ------------------ERSSISLVSLAGSL 256 (318)
T ss_dssp SCEEEEETTEEEEEEEEETTE----EEEEEEEEETTTCCEEECCCCSS------------------CCBSCEEEEETTEE
T ss_pred cceEEEECCEEEEEcCcCCCC----ccceEEEEECCCCeEEECCCCCC------------------cccceEEEEECCEE
Confidence 999999999999999986543 25789999999999999987644 89999999999999
Q ss_pred EEEcCcCCC---------ccccceEEecCCCCccccC
Q 004198 341 YIYGGLKGD---------ILLDDFLVAENSPFQSDVN 368 (769)
Q Consensus 341 yv~GG~~~~---------~~~~D~~~ld~~~~~~~~~ 368 (769)
||+||.+.. ..++|+|++|..+.+|...
T Consensus 257 ~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 257 YAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred EEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 999998752 4579999999998887654
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=5.6e-35 Score=347.04 Aligned_cols=300 Identities=12% Similarity=0.119 Sum_probs=242.2
Q ss_pred ceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEec-C--CC
Q 004198 18 TYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIR-P--AG 94 (769)
Q Consensus 18 ~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~-~--~g 94 (769)
.+|...+..|.+|++|+++ + +++||+|||... . ..+++++||+.+++|+.++ + .+
T Consensus 377 ~~~~~~~~~p~rr~g~~~~-~------~~~iyv~GG~~~--~-------------~~~~v~~yd~~~~~W~~~~~~~p~~ 434 (695)
T 2zwa_A 377 YQLLECECPINRKFGDVDV-A------GNDVFYMGGSNP--Y-------------RVNEILQLSIHYDKIDMKNIEVSSS 434 (695)
T ss_dssp EEEEECCCTTCCBSCEEEE-C------SSCEEEECCBSS--S-------------BCCCEEEEEECSSCEEEEECCCCCS
T ss_pred eeEeccCCCCCCceeEEEE-E------CCEEEEECCCCC--C-------------CcCcEEEEECCCCeEEEeccCCCCC
Confidence 4466667778889888766 6 889999999865 2 4789999999999999998 4 35
Q ss_pred CCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecC
Q 004198 95 EPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGN 172 (769)
Q Consensus 95 ~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~ 172 (769)
..|.+|.+|+++++ +++|||+||.+.....++++|+||+.+ .+|+.+ +++|.+|++|+++++.++.|||+||.
T Consensus 435 ~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t--~~W~~~---~~~p~~R~~h~~~~~~~~~iyv~GG~ 509 (695)
T 2zwa_A 435 EVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT--REWSMI---KSLSHTRFRHSACSLPDGNVLILGGV 509 (695)
T ss_dssp CCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT--TEEEEC---CCCSBCCBSCEEEECTTSCEEEECCB
T ss_pred CCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC--CcEEEC---CCCCCCcccceEEEEcCCEEEEECCC
Confidence 67899999999999 999999999876666789999999999 779999 58999999999998745699999998
Q ss_pred CCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec-C-CEEEEEcccCCCC-CcccceEEEecCCCCce---
Q 004198 173 DGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-D-GMFLLCGGRDASG-APLADAYGLLMHRNGQW--- 246 (769)
Q Consensus 173 ~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~-~-g~l~v~GG~~~~~-~~l~d~~~ld~~~~~~W--- 246 (769)
+... ++|+||+.++ +|+.+.+.+..|.+|..|+++++. + ++||++||....+ ..++++|.|+..++ +|
T Consensus 510 ~~~~---~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~-~w~~~ 583 (695)
T 2zwa_A 510 TEGP---AMLLYNVTEE--IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE-NATEP 583 (695)
T ss_dssp CSSC---SEEEEETTTT--EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT-CSSCC
T ss_pred CCCC---CEEEEECCCC--ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC-ccccc
Confidence 7765 9999999999 999999877789999999977643 3 7999999997654 56899999999876 33
Q ss_pred -EEEeCCCCCCCcccceEEEEeC-CEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccC
Q 004198 247 -EWTLAPGVAPSPRYQHAAVFVG-ARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLE 324 (769)
Q Consensus 247 -~W~~~~~~~P~~R~~hs~~~~~-~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~ 324 (769)
+|..+...++.+|++|++++++ ++|||+||...... ....+++++||+.+++|+.+....... ..+
T Consensus 584 ~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~t~~W~~~~~p~~~~-----------~~~ 651 (695)
T 2zwa_A 584 ITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSIISLDPLSETLTSIPISRRIW-----------EDH 651 (695)
T ss_dssp EEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC-CCTTTSEEEEETTTTEEEECCCCHHHH-----------HHS
T ss_pred eEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC-CCCCCeEEEEECCCCeEEEeecccccc-----------CCC
Confidence 4777765556899999999999 99999999865432 124688999999999999654321100 001
Q ss_pred cccccceEEEEeCC-EEEEEcCcC----CCccccceEEecCCC
Q 004198 325 LMRRCRHASASIGV-RIYIYGGLK----GDILLDDFLVAENSP 362 (769)
Q Consensus 325 ~~~R~~hs~~~~~~-~iyv~GG~~----~~~~~~D~~~ld~~~ 362 (769)
+..+.+|+++.+++ +|||+||.. -..+++++|.||+..
T Consensus 652 ~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 652 SLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp CCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEECC
T ss_pred CccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEEc
Confidence 12678899999887 999999953 346778999998764
No 23
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.98 E-value=1.7e-31 Score=291.84 Aligned_cols=262 Identities=19% Similarity=0.251 Sum_probs=202.2
Q ss_pred CCcccc--cceeecCCCCC-CCccccEEEEecccCCCCCEEEEEcCCCC-CCCCCCCCCCCccccccCCcEEEEECCCCc
Q 004198 11 PSYRTL--ETYWDTDEDAP-GPRCGHTLTAVAATKTTGPRLILFGGATA-IEGGATSSAPGIRLAGVTNSVHLYDVLTRK 86 (769)
Q Consensus 11 ~~y~~~--~~~w~~~~~~P-~~R~ght~~~v~~~~~~~~~lyl~GG~~~-~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~ 86 (769)
-.||+. +++|...+++| .||.+|+++++ +++||||||... ..+. ....+++++||+.+++
T Consensus 34 ~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~------~~~lyv~GG~~~~~~~~----------~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 34 YKLDTQAKDKKWTALAAFPGGPRDQATSAFI------DGNLYVFGGIGKNSEGL----------TQVFNDVHKYNPKTNS 97 (357)
T ss_dssp EEEETTSSSCCEEECCCCTTCCCBSCEEEEE------TTEEEEECCEEECTTSC----------EEECCCEEEEETTTTE
T ss_pred EEEccccCCCCeeECCCCCCCcCccceEEEE------CCEEEEEcCCCCCCCcc----------ceeeccEEEEeCCCCc
Confidence 368887 48999999999 89999999999 899999999822 1110 1257999999999999
Q ss_pred EEEecCCCCCCcccccceEEEECCEEEEECccCCCC---------------------------------CCcCcEEEEEc
Q 004198 87 WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAG---------------------------------HSTDDLYVLDL 133 (769)
Q Consensus 87 W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~---------------------------------~~~~dl~~~d~ 133 (769)
|++++++. |.+|.+|++++++++||++||.+... ..++++++||+
T Consensus 98 W~~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 175 (357)
T 2uvk_A 98 WVKLMSHA--PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP 175 (357)
T ss_dssp EEECSCCC--SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred EEECCCCC--CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence 99998874 68999999999999999999975321 24689999999
Q ss_pred cCCcceEEEeeecCCCCCCc-cccEEEEECCcEEEEEecCCCC-CccCceeEEeC--CCCCceEEEcCCCCCCCCccccc
Q 004198 134 TNDKFKWHRVVVQGQGPGPR-YGHVMDLVSQRYLVSVSGNDGK-RVLSDAWALDT--AQKPYVWQRLNPEGDRPSARMYA 209 (769)
Q Consensus 134 ~t~~~~W~~~~~~g~~p~~R-~~hs~~~~~~~~l~v~GG~~~~-~~~~dv~~~d~--~~~~~~W~~v~~~~~~P~~r~~h 209 (769)
.+ .+|+.+. ++|.+| .+|+++++++ .|||+||.+.. ...+++|+||+ +++ +|+.+..+ ..|..|..|
T Consensus 176 ~~--~~W~~~~---~~p~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~~d~d~~~~--~W~~~~~~-~~~~~~~~~ 246 (357)
T 2uvk_A 176 ST--QQWSYAG---ESPWYGTAGAAVVNKGD-KTWLINGEAKPGLRTDAVFELDFTGNNL--KWNKLAPV-SSPDGVAGG 246 (357)
T ss_dssp TT--TEEEEEE---ECSSCCCBSCEEEEETT-EEEEECCEEETTEECCCEEEEECC---C--EEEECCCS-STTTCCBSC
T ss_pred CC--CcEEECC---CCCCCCcccccEEEECC-EEEEEeeecCCCcccCceEEEEecCCCC--cEEecCCC-CCCcccccc
Confidence 99 7799994 677654 5588888876 99999997653 35789999987 777 99999876 223445566
Q ss_pred EEEEecCCEEEEEcccCCC----------------CCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEE
Q 004198 210 TASARSDGMFLLCGGRDAS----------------GAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHV 273 (769)
Q Consensus 210 sa~~~~~g~l~v~GG~~~~----------------~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V 273 (769)
++++ .+++||++||.+.. ...+++++.||..++ +|..+.. .|.+|..|+++.++++|||
T Consensus 247 ~~~~-~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~-~p~~r~~~~~~~~~~~i~v 321 (357)
T 2uvk_A 247 FAGI-SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG---KWDKSGE-LSQGRAYGVSLPWNNSLLI 321 (357)
T ss_dssp EEEE-ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC------CEEEEE-CSSCCBSSEEEEETTEEEE
T ss_pred eEEE-ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC---ceeeCCC-CCCCcccceeEEeCCEEEE
Confidence 6665 57799999997532 123578999999866 6666644 4789999999999999999
Q ss_pred EecccCCCCcccCCCcEEEEECCCCcEEeccCCc
Q 004198 274 TGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLV 307 (769)
Q Consensus 274 ~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~ 307 (769)
+||.+..+. ..+++++|+.++++|.+....+
T Consensus 322 ~GG~~~~~~---~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 322 IGGETAGGK---AVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp EEEECGGGC---EEEEEEEEEC-CCSCEEEC---
T ss_pred EeeeCCCCC---EeeeEEEEEEcCcEeEeeeccc
Confidence 999865442 2578999999999999987764
No 24
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=1.6e-28 Score=290.43 Aligned_cols=288 Identities=14% Similarity=0.095 Sum_probs=215.2
Q ss_pred CCCcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEE
Q 004198 10 APSYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTR 89 (769)
Q Consensus 10 ~~~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~ 89 (769)
.+.||+.++.|....++ ||.+|++++++. +++||++||........ ......++++||+.+++|+.
T Consensus 168 ~~~~dp~~~~W~~~~~~--P~~~~~~av~~~----~g~l~v~GG~~~~~~~~--------~~~~~~~~~~yd~~t~~w~~ 233 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDL--PIVPAAAAIEPT----SGRVLMWSSYRNDAFGG--------SPGGITLTSSWDPSTGIVSD 233 (656)
T ss_dssp CCCCCTTSCEEEEEEEC--SSCCSEEEEETT----TTEEEEEEECCCTTTCS--------CCCSEEEEEEECTTTCCBCC
T ss_pred cccCCCCCCeeeeeccC--CCCceeEEEEec----CCEEEEEeccccccccc--------CCCCeEEEEEEeCCCCcEEe
Confidence 67899999999988765 456677776632 67999999986532110 00124579999999999998
Q ss_pred ecCCCCCCcccccce--EEE-ECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEE
Q 004198 90 IRPAGEPPSPRAAHA--AAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYL 166 (769)
Q Consensus 90 l~~~g~~P~~R~~hs--~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l 166 (769)
+..+ |.+|..|+ ++. .+++||++||.... ++++||+.+ .+|+++ .++|.+|.+|+++++.+++|
T Consensus 234 ~~~~---~~~~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t--~~W~~~---~~~~~~R~~~s~~~~~dg~i 300 (656)
T 1k3i_A 234 RTVT---VTKHDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSS--DSWIPG---PDMQVARGYQSSATMSDGRV 300 (656)
T ss_dssp CEEE---ECSCCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGG--TEEEEC---CCCSSCCSSCEEEECTTSCE
T ss_pred Cccc---CCCCCCccccccCCCCCCEEEeCCCCCC-----ceEEecCcC--CceeEC---CCCCccccccceEEecCCeE
Confidence 8654 55666654 333 57899999997432 799999999 779999 58999999999988855599
Q ss_pred EEEec-CCCCCccCceeEEeCCCCCceEEEcCCCCCC-------------------------------------------
Q 004198 167 VSVSG-NDGKRVLSDAWALDTAQKPYVWQRLNPEGDR------------------------------------------- 202 (769)
Q Consensus 167 ~v~GG-~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~------------------------------------------- 202 (769)
|++|| .++...++++++||+.++ +|+.+...+..
T Consensus 301 yv~GG~~~~~~~~~~~e~yd~~t~--~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~ 378 (656)
T 1k3i_A 301 FTIGGSWSGGVFEKNGEVYSPSSK--TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG 378 (656)
T ss_dssp EEECCCCCSSSCCCCEEEEETTTT--EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECST
T ss_pred EEEeCcccCCcccccceEeCCCCC--cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCC
Confidence 99999 566778899999999999 99997322100
Q ss_pred ----------------CCcccccEEEE--ecCCEEEEEcccCCC--CCccc---ceEEEecCCCCceEEEeCC-CCCCCc
Q 004198 203 ----------------PSARMYATASA--RSDGMFLLCGGRDAS--GAPLA---DAYGLLMHRNGQWEWTLAP-GVAPSP 258 (769)
Q Consensus 203 ----------------P~~r~~hsa~~--~~~g~l~v~GG~~~~--~~~l~---d~~~ld~~~~~~W~W~~~~-~~~P~~ 258 (769)
++++..|++++ ..+++||++||.+.. ...++ +++.||..++ +|.... +.+|.+
T Consensus 379 ~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~~~~~mp~~ 455 (656)
T 1k3i_A 379 SGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS---PNTVFASNGLYFA 455 (656)
T ss_dssp TCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC---CEEEECTTCCSSC
T ss_pred cceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC---CeeEEccCCCCCC
Confidence 11223455554 358999999997532 12344 6777887755 555544 456899
Q ss_pred ccceEEEEe-CCEEEEEecccCCCC--cccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEE
Q 004198 259 RYQHAAVFV-GARLHVTGGALRGGR--AIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASAS 335 (769)
Q Consensus 259 R~~hs~~~~-~~~i~V~GG~~~~~~--~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~ 335 (769)
|..|+++++ +++|||+||...... ......++++||+++++|+.+..++. +|..|++++
T Consensus 456 R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~------------------~R~~hs~a~ 517 (656)
T 1k3i_A 456 RTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI------------------VRVYHSISL 517 (656)
T ss_dssp CBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSS------------------CCCTTEEEE
T ss_pred cccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCC------------------ccccccHhh
Confidence 999999988 999999999763311 12236789999999999999887744 999999988
Q ss_pred e--CCEEEEEcCcC
Q 004198 336 I--GVRIYIYGGLK 347 (769)
Q Consensus 336 ~--~~~iyv~GG~~ 347 (769)
+ +++|||+||..
T Consensus 518 ll~dg~v~v~GG~~ 531 (656)
T 1k3i_A 518 LLPDGRVFNGGGGL 531 (656)
T ss_dssp ECTTSCEEEEECCC
T ss_pred cCCCcEEEecCCCC
Confidence 8 99999999964
No 25
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=9.5e-28 Score=284.92 Aligned_cols=235 Identities=16% Similarity=0.204 Sum_probs=196.3
Q ss_pred CCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEee-e--cCCCCCCccccEEEEEC-CcEEEEEec
Q 004198 96 PPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVV-V--QGQGPGPRYGHVMDLVS-QRYLVSVSG 171 (769)
Q Consensus 96 ~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~-~--~g~~p~~R~~hs~~~~~-~~~l~v~GG 171 (769)
.|.+|++|++ ++++.||++||.+. ...+++|+||+.+ .+|+.+. . .+.+|.+|++|+++++. ++.|||+||
T Consensus 385 ~p~rr~g~~~-~~~~~iyv~GG~~~--~~~~~v~~yd~~~--~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG 459 (695)
T 2zwa_A 385 PINRKFGDVD-VAGNDVFYMGGSNP--YRVNEILQLSIHY--DKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGG 459 (695)
T ss_dssp TTCCBSCEEE-ECSSCEEEECCBSS--SBCCCEEEEEECS--SCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECC
T ss_pred CCCCceeEEE-EECCEEEEECCCCC--CCcCcEEEEECCC--CeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcC
Confidence 4566666554 48999999999866 6789999999999 6799997 3 35689999999999993 459999999
Q ss_pred CCCCC-ccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEe
Q 004198 172 NDGKR-VLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTL 250 (769)
Q Consensus 172 ~~~~~-~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~ 250 (769)
.+... .++++|+||+.++ +|+++.++ |.+|..|+++++.+++||++||.+... +++.||..++ +|..
T Consensus 460 ~~~~~~~~~dv~~yd~~t~--~W~~~~~~---p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~---~W~~ 527 (695)
T 2zwa_A 460 RKAPHQGLSDNWIFDMKTR--EWSMIKSL---SHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEE---IFKD 527 (695)
T ss_dssp BSSTTCBCCCCEEEETTTT--EEEECCCC---SBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTT---EEEE
T ss_pred CCCCCCccccEEEEeCCCC--cEEECCCC---CCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCC---ceEE
Confidence 87754 7899999999999 99999765 889999999987789999999997654 9999999977 6666
Q ss_pred CCC--CCCCcccceEEEEeC---CEEEEEecccCCCCcccCCCcEEEEECCCCc------EEeccCCccCCCCCCCCCCC
Q 004198 251 APG--VAPSPRYQHAAVFVG---ARLHVTGGALRGGRAIEGEAAVAVLDTAAGV------WLDRNGLVTSSRTSKGHGEH 319 (769)
Q Consensus 251 ~~~--~~P~~R~~hs~~~~~---~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~------W~~~~~~~~~~~~~~~~~~~ 319 (769)
++. ..|.+|++|++++++ ++|||+||....+. ...+++++||+.+++ |+.+..++
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~--~~~~~v~~yd~~~~~w~~~~~W~~~~~~p------------ 593 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT--TVSDKAIIFKYDAENATEPITVIKKLQHP------------ 593 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS--CBCCEEEEEEECTTCSSCCEEEEEEEECG------------
T ss_pred ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC--eeeCcEEEEEccCCccccceEEEEcCCCC------------
Confidence 653 468899999988876 89999999865431 236889999999999 88887642
Q ss_pred CCccCcccccceEEEEeC-CEEEEEcCcCCC---ccccceEEecCCCCccc
Q 004198 320 DPSLELMRRCRHASASIG-VRIYIYGGLKGD---ILLDDFLVAENSPFQSD 366 (769)
Q Consensus 320 ~~~~~~~~R~~hs~~~~~-~~iyv~GG~~~~---~~~~D~~~ld~~~~~~~ 366 (769)
+.+|++|++++++ ++|||+||.++. ...++++++|..+.+|.
T Consensus 594 -----~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 594 -----LFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp -----GGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred -----CCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 2389999999999 999999998765 36899999999988766
No 26
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=99.92 E-value=3.2e-26 Score=248.02 Aligned_cols=174 Identities=20% Similarity=0.235 Sum_probs=133.8
Q ss_pred HhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCCCCCC--cceeEEEeccccCCCCChHHHHHHHHHhhh---cC
Q 004198 570 FMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDI--TYIDYLFLGDYVDRGQHSLETITLLLALKI---EY 644 (769)
Q Consensus 570 ~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~--~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~---~~ 644 (769)
|++|+++++...+++|||||||++.+|.++|+..++++.+..+ ....+||||||||||++|+||+.+|++|+. ++
T Consensus 60 ~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~ 139 (342)
T 2z72_A 60 KQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDA 139 (342)
T ss_dssp TSCCCSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCcceecCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 7899999999999999999999999999999999876532111 112799999999999999999999999986 79
Q ss_pred CCceEEecCCcchhhhhhcc----CCHHHHHHHhCCCCchhhhH---HHhHhhccccceEEEeceEEEEcCCCCCCCC--
Q 004198 645 PENVHLIRGNHEAADINALF----GFRLECIERMGENDGIWAWT---RFNQLFNCLPLAALIEKKIICMHGGIGRSIH-- 715 (769)
Q Consensus 645 p~~v~llrGNHE~~~~~~~~----g~~~e~~~~~~~~~~~~~~~---~~~~~f~~lP~~~~i~~~i~~vHgGi~~~~~-- 715 (769)
|.++++||||||.+.++..+ ..+....+.+... ...+|. ...++|+.||++++++ +++|||||++|.+.
T Consensus 140 ~~~v~~v~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl~p~~~~~ 217 (342)
T 2z72_A 140 GGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP-YNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGISSEWISR 217 (342)
T ss_dssp TCEEEECCCHHHHHHHHTCCTTSCTTHHHHHHHTTSC-GGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCCCHHHHHT
T ss_pred CCeEEEEecCCcHHHhhCcccccccccchHHHHhccc-HHHHHHHhHHHHHHHhhCCeEEEEC-CEEEEECCCChhhccc
Confidence 99999999999999886421 1222222223221 234543 4567788889999996 79999999999764
Q ss_pred --ChHHhhhccCCccc-----CCCccceeceeccCCCC
Q 004198 716 --SVEQIEKLERPITM-----DAGSIILMDLLWFVLNI 746 (769)
Q Consensus 716 --~~~~i~~~~rp~~~-----~~~~~~~~dllWsdp~~ 746 (769)
++++|+.+.|+... +.+ ..++++|||||.+
T Consensus 218 ~~~l~~i~~~~r~~~~~~~~~~~~-~~~~~~lwsd~~~ 254 (342)
T 2z72_A 218 ELTLDKANALYRANVDASKKSLKA-DDLLNFLFFGNGP 254 (342)
T ss_dssp TCCHHHHHHHHHHHTTSCHHHHHH-SHHHHHHHSTTST
T ss_pred CCCHHHHHHHhhhhcccccccccc-CHHHHhccCCCCC
Confidence 89999988776321 111 2568999999865
No 27
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.91 E-value=1.8e-23 Score=247.32 Aligned_cols=250 Identities=13% Similarity=0.128 Sum_probs=190.5
Q ss_pred CCCcccccceeecCCCCCCCccccE--EEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcE
Q 004198 10 APSYRTLETYWDTDEDAPGPRCGHT--LTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKW 87 (769)
Q Consensus 10 ~~~y~~~~~~w~~~~~~P~~R~ght--~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W 87 (769)
.-.||+.+++|...+.+|.+|..|+ ++++ .+++||++||... .++++||+.+++|
T Consensus 221 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~-----~~g~lyv~GG~~~------------------~~v~~yd~~t~~W 277 (656)
T 1k3i_A 221 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMD-----GNGQIVVTGGNDA------------------KKTSLYDSSSDSW 277 (656)
T ss_dssp EEEECTTTCCBCCCEEEECSCCCSSCEEEEC-----TTSCEEEECSSST------------------TCEEEEEGGGTEE
T ss_pred EEEEeCCCCcEEeCcccCCCCCCccccccCC-----CCCCEEEeCCCCC------------------CceEEecCcCCce
Confidence 4579999999999999998887664 3333 1789999999641 3799999999999
Q ss_pred EEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC--CCCC-------------
Q 004198 88 TRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG--QGPG------------- 151 (769)
Q Consensus 88 ~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g--~~p~------------- 151 (769)
+++.. +|.+|..|+++.+ +++||++||........+++++||+.+ .+|+.++..+ +++.
T Consensus 278 ~~~~~---~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t--~~W~~~~~~~~~p~~~~~~~~~~~~~~~i 352 (656)
T 1k3i_A 278 IPGPD---MQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS--KTWTSLPNAKVNPMLTADKQGLYRSDNHA 352 (656)
T ss_dssp EECCC---CSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT--TEEEEETTSCSGGGCCCCTTGGGTTTCSC
T ss_pred eECCC---CCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC--CcceeCCCccccccccccccceeecCCce
Confidence 99864 4789999999999 899999999655555789999999999 6799873110 1111
Q ss_pred --------------------------------------------CccccEEEEE--CCcEEEEEecCCC---CCccC---
Q 004198 152 --------------------------------------------PRYGHVMDLV--SQRYLVSVSGNDG---KRVLS--- 179 (769)
Q Consensus 152 --------------------------------------------~R~~hs~~~~--~~~~l~v~GG~~~---~~~~~--- 179 (769)
++..++++++ .+++||++||.+. ...++
T Consensus 353 yv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 432 (656)
T 1k3i_A 353 WLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAH 432 (656)
T ss_dssp CEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEE
T ss_pred EEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcce
Confidence 1223444442 3559999999643 33455
Q ss_pred ceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCC-----CCcccceEEEecCCCCceEEEeCCCC
Q 004198 180 DAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDAS-----GAPLADAYGLLMHRNGQWEWTLAPGV 254 (769)
Q Consensus 180 dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~-----~~~l~d~~~ld~~~~~~W~W~~~~~~ 254 (769)
++++||+.++ +|..+. .+.+|.+|..|++++..+++||++||.+.. ...+++++.||..++ +|..+..+
T Consensus 433 ~v~~yd~~~~--~W~~~~-~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~---~W~~~~~~ 506 (656)
T 1k3i_A 433 IITLGEPGTS--PNTVFA-SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD---TFYKQNPN 506 (656)
T ss_dssp EEECCSTTSC--CEEEEC-TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT---EEEECCCC
T ss_pred EEEcCCCCCC--CeeEEc-cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC---ceeecCCC
Confidence 7889999998 899886 234589999999998889999999997532 245789999999877 78887655
Q ss_pred CCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEEC
Q 004198 255 APSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDT 295 (769)
Q Consensus 255 ~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~ 295 (769)
|.+|..|+++++ +++|||+||..+... ....-++++|.+
T Consensus 507 -~~~R~~hs~a~ll~dg~v~v~GG~~~~~~-~~~~~~~e~~~P 547 (656)
T 1k3i_A 507 -SIVRVYHSISLLLPDGRVFNGGGGLCGDC-TTNHFDAQIFTP 547 (656)
T ss_dssp -SSCCCTTEEEEECTTSCEEEEECCCCTTC-SCCCCEEEEEEC
T ss_pred -CCccccccHhhcCCCcEEEecCCCCCCCC-CCCeeEEEEEeC
Confidence 799999999988 999999999654332 122345667766
No 28
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=99.90 E-value=9.6e-25 Score=229.34 Aligned_cols=150 Identities=21% Similarity=0.349 Sum_probs=120.0
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 661 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~ 661 (769)
+++||||||||+.+|.++|+.+++++..+ .+||+|||||||++|+||+.+|+++. .++++||||||.+.++
T Consensus 2 ~i~vigDiHG~~~~l~~ll~~~~~~~~~d-----~~v~lGD~vdrG~~s~~~l~~l~~l~----~~~~~v~GNHe~~~l~ 72 (280)
T 2dfj_A 2 ATYLIGDVHGCYDELIALLHKVEFTPGKD-----TLWLTGDLVARGPGSLDVLRYVKSLG----DSVRLVLGNHDLHLLA 72 (280)
T ss_dssp CEEEECCCCSCHHHHHHHHHHTTCCTTTC-----EEEECSCCSSSSSCHHHHHHHHHHTG----GGEEECCCHHHHHHHH
T ss_pred eEEEEecCCCCHHHHHHHHHHhCCCCCCC-----EEEEeCCcCCCCCccHHHHHHHHhCC----CceEEEECCCcHHHHh
Confidence 48999999999999999999999843321 79999999999999999999999873 5899999999999999
Q ss_pred hccCCHHHHH----HHhCCCCchhhhHHHhHhhccccceEEEec-eEEEEcCCCCCCCCChHHhhhccCCcc----cCCC
Q 004198 662 ALFGFRLECI----ERMGENDGIWAWTRFNQLFNCLPLAALIEK-KIICMHGGIGRSIHSVEQIEKLERPIT----MDAG 732 (769)
Q Consensus 662 ~~~g~~~e~~----~~~~~~~~~~~~~~~~~~f~~lP~~~~i~~-~i~~vHgGi~~~~~~~~~i~~~~rp~~----~~~~ 732 (769)
..+||..+.. ..+. ....+..+.++|+.||+++.+++ +++|||||++|.+ ++++++.+.|+.+ .+..
T Consensus 73 ~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi~p~~-~l~~~~~~~r~~e~~l~~~~~ 148 (280)
T 2dfj_A 73 VFAGISRNKPKDRLTPLL---EAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW-DLQTAKECARDVEAVLSSDSY 148 (280)
T ss_dssp HHTTSSCCCGGGCCHHHH---TSTTHHHHHHHHHTSCSEEEETTTTEEEESSCCCTTC-CHHHHHHHHHHHHHHHHSTTH
T ss_pred HhcCCcccchhhhHHHHh---hhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCCCcCc-CHHHHHHHHHHHHHhhcCCcH
Confidence 8888753210 0110 01234567788999999998887 8999999999998 7999888877664 2222
Q ss_pred ccceeceeccCCC
Q 004198 733 SIILMDLLWFVLN 745 (769)
Q Consensus 733 ~~~~~dllWsdp~ 745 (769)
..++|+||+||.
T Consensus 149 -~~~~~~l~~d~~ 160 (280)
T 2dfj_A 149 -PFFLDAMYGDMP 160 (280)
T ss_dssp -HHHHHHTTCSCC
T ss_pred -HHHHHHhcCCCC
Confidence 257899999996
No 29
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=99.85 E-value=1e-21 Score=205.03 Aligned_cols=185 Identities=17% Similarity=0.220 Sum_probs=124.7
Q ss_pred HHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCC-CCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCC
Q 004198 568 QIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPST-AGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPE 646 (769)
Q Consensus 568 ~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~-~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~ 646 (769)
.+|.+++.++++..+|+|||||||++.+|.++|+.++..+. + .+||+|||||||+++.|++.+|+.+
T Consensus 6 ~~~~~~~~l~~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d------~ii~~GD~vd~g~~~~~~l~~l~~~------ 73 (262)
T 2qjc_A 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSD------TLVAVGDLVNKGPDSFGVVRLLKRL------ 73 (262)
T ss_dssp --CCCEEECTTCCSCEEEECCCTTCHHHHHHHHHHHTCCTTTS------EEEECSCCSSSSSCHHHHHHHHHHH------
T ss_pred cccCChhhhcCCCCeEEEEeCCCCCHHHHHHHHHHHhccCCCC------EEEEecCCCCCCCCHHHHHHHHHHC------
Confidence 46778888988888999999999999999999999987653 3 7999999999999999999999864
Q ss_pred ceEEecCCcchhhhhhccCCHHH-HHHHhCCCCc-----hhhhHHHhHhhccccceEEEe-ceEEEEcCCCCCCCC----
Q 004198 647 NVHLIRGNHEAADINALFGFRLE-CIERMGENDG-----IWAWTRFNQLFNCLPLAALIE-KKIICMHGGIGRSIH---- 715 (769)
Q Consensus 647 ~v~llrGNHE~~~~~~~~g~~~e-~~~~~~~~~~-----~~~~~~~~~~f~~lP~~~~i~-~~i~~vHgGi~~~~~---- 715 (769)
.+++|+||||...++..+++..+ +..+++.... ..+.....++|+.||+++.++ .+++|||||+.|.+.
T Consensus 74 ~~~~v~GNHd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~~~~ 153 (262)
T 2qjc_A 74 GAYSVLGNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPVDRQ 153 (262)
T ss_dssp TCEECCCHHHHHHHHHHHCC-------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCGGGC
T ss_pred CCEEEeCcChHHHHhhhcCCCccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCcccC
Confidence 59999999999998887777654 3334432211 123356778899999999886 589999999998763
Q ss_pred ChHHhhhc---cCCcccCCCccceeceeccCCCCC---cccccCcc-eEEeehhhhhhh
Q 004198 716 SVEQIEKL---ERPITMDAGSIILMDLLWFVLNIS---TILRSMVL-YIILFSLKIFIS 767 (769)
Q Consensus 716 ~~~~i~~~---~rp~~~~~~~~~~~dllWsdp~~~---~~~~~~~~-~~~~~~~~~~~~ 767 (769)
..+++..+ .++...+..+ ..++|+||... .+.....+ ...+||+.....
T Consensus 154 ~~~~l~~ir~~~~~~~~~~~G---~~~~~~d~~~~~~~~w~~~~~g~~~vvfGHt~~~~ 209 (262)
T 2qjc_A 154 YEDEVTTMRNLIEKEQEATGG---VTLTATEETNDGGKPWASMWRGPETVVFGHDARRG 209 (262)
T ss_dssp CHHHHHHCCEEEEC----------CCEEEESCSTTCCEEGGGGCCCSSEEEECCCGGGC
T ss_pred CHHHHhhhhhcccccccCCCC---ccccccCCCCcCCCChhhccCCCCEEEECCCcccc
Confidence 23333333 2222211222 24889998432 23322222 335788765543
No 30
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.73 E-value=1.8e-18 Score=175.85 Aligned_cols=141 Identities=26% Similarity=0.351 Sum_probs=101.3
Q ss_pred CCEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 581 APVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 581 ~~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
.+++|||||||++.+|.++|+.++.++..+ .+||+|||||||+++.|++.+|.. ..+++|+||||...+
T Consensus 13 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d-----~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GNhd~~~~ 81 (221)
T 1g5b_A 13 RNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMI 81 (221)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTC-----EEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHH
T ss_pred ceEEEEEcCCCCHHHHHHHHHHccCCCCCC-----EEEEeCCccCCCCChHHHHHHHhc------CCEEEEccCcHHHHH
Confidence 469999999999999999999998753321 788999999999999999988753 379999999999887
Q ss_pred hhccCCHHHH-HHHhCCC-------CchhhhHHHhHhhccccceEEE---eceEEEEcCCCCCCCCChHHhhhccCCccc
Q 004198 661 NALFGFRLEC-IERMGEN-------DGIWAWTRFNQLFNCLPLAALI---EKKIICMHGGIGRSIHSVEQIEKLERPITM 729 (769)
Q Consensus 661 ~~~~g~~~e~-~~~~~~~-------~~~~~~~~~~~~f~~lP~~~~i---~~~i~~vHgGi~~~~~~~~~i~~~~rp~~~ 729 (769)
+..+++.... +...+.. ....+++.+.++|+.||+++.+ +.+++|||||+++.... ..+|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~~~~------~~~~~~- 154 (221)
T 1g5b_A 82 DGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFDEYE------FGKPVD- 154 (221)
T ss_dssp HHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSSBCC------TTCCCC-
T ss_pred hhhccCCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChhhcc------cCCCcc-
Confidence 7553332111 1111110 1123456788999999999877 46899999999765321 123321
Q ss_pred CCCccceeceeccCCC
Q 004198 730 DAGSIILMDLLWFVLN 745 (769)
Q Consensus 730 ~~~~~~~~dllWsdp~ 745 (769)
..+++|+++.
T Consensus 155 ------~~~~lw~~~~ 164 (221)
T 1g5b_A 155 ------HQQVIWNRER 164 (221)
T ss_dssp ------HHHHHHCCHH
T ss_pred ------ccccccCchh
Confidence 2478898764
No 31
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.31 E-value=1e-12 Score=135.54 Aligned_cols=114 Identities=21% Similarity=0.207 Sum_probs=85.6
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 661 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~ 661 (769)
.+.++|||||++.+|.++++.+. ..+ .++++||++|+|+++.|++.+|..++ .+++++||||.....
T Consensus 5 ri~~isDiHg~~~~l~~~l~~~~--~~d------~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~ 71 (246)
T 3rqz_A 5 RILIISDVHANLVALEAVLSDAG--RVD------DIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWACIG 71 (246)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHC--SCS------EEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHHTC
T ss_pred EEEEEeecCCCHHHHHHHHHhcc--CCC------EEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHHhc
Confidence 58999999999999999999987 222 78999999999999999999999884 379999999988765
Q ss_pred hccCCH-----HHHHHHhCCCCchhhhHHHhHhhccccceEEEeceEEEEcCCCCCC
Q 004198 662 ALFGFR-----LECIERMGENDGIWAWTRFNQLFNCLPLAALIEKKIICMHGGIGRS 713 (769)
Q Consensus 662 ~~~g~~-----~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~~~i~~vHgGi~~~ 713 (769)
...... .+..... ...+.....++++.||..... ++++++||++...
T Consensus 72 ~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~L~~lp~~~~~-~~i~~~Hg~p~~~ 123 (246)
T 3rqz_A 72 RLSLDEFNPVARFASYWT----TMQLQAEHLQYLESLPNRMID-GDWTVVHGSPRHP 123 (246)
T ss_dssp CCCCC--CGGGGCHHHHH----HHHCCHHHHHHHHHCCSEEEE-TTEEEESSCSSST
T ss_pred cCCccccCHHHHHHHHHH----HHHcCHHHHHHHHhCCcEEEE-CCEEEEECCcCCc
Confidence 432210 0000000 112224566788999998776 4899999998653
No 32
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.31 E-value=1.6e-12 Score=135.81 Aligned_cols=119 Identities=15% Similarity=0.077 Sum_probs=86.4
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADIN 661 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~~ 661 (769)
.|.||+||||++.+|.++++.+.....+ .++|+||+|++|+.+.|++.+|.+++ .+++|+||||...++
T Consensus 13 ~i~~iSDiHg~~~~l~~vl~~~~~~~~D------~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~ 81 (270)
T 3qfm_A 13 KIALLSDIHGNTTALEAVLADARQLGVD------EYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLWH 81 (270)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHTTCC------EEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHhcCCC------EEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHHH
Confidence 4899999999999999999887644333 79999999999999999999998863 589999999998876
Q ss_pred hcc---CCHHHHHHHhCC---CCchhhhHHHhHhhccccceEEE--e-ceEEEEcCCCC
Q 004198 662 ALF---GFRLECIERMGE---NDGIWAWTRFNQLFNCLPLAALI--E-KKIICMHGGIG 711 (769)
Q Consensus 662 ~~~---g~~~e~~~~~~~---~~~~~~~~~~~~~f~~lP~~~~i--~-~~i~~vHgGi~ 711 (769)
... +|.......+.. .....+.....++++.||....+ + .+|+++||-..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~ 140 (270)
T 3qfm_A 82 GVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPD 140 (270)
T ss_dssp HHTTCSCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTT
T ss_pred hhccccCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCC
Confidence 443 232111111100 00112234567899999998766 3 38999997654
No 33
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.23 E-value=2e-11 Score=126.04 Aligned_cols=120 Identities=16% Similarity=0.114 Sum_probs=83.3
Q ss_pred CEEEEccCCCCHHHHHHHHHHhC---CC--CCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcc
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYG---FP--STAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHE 656 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~---~~--~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE 656 (769)
.+.+||||||++..|.++++.+. .. ..+ .+|++||++|+|+.+.|++.+|..++... .+++++||||
T Consensus 3 ~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d------~ii~~GD~~~~g~~~~~~~~~l~~l~~~~--~~~~v~GNhD 74 (252)
T 1nnw_A 3 YVAVLANIAGNLPALTAALSRIEEMREEGYEIE------KYYILGNIVGLFPYPKEVIEVIKDLTKKE--NVKIIRGKYD 74 (252)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEE------EEEEESCSSSSSSCHHHHHHHHHHHHHHS--CEEEECCHHH
T ss_pred EEEEEeecCCCHHHHHHHHHHHHhhhhccCCCC------EEEEeCccCCCCCCHHHHHHHHHhhHhhc--CeeEEecchH
Confidence 48999999999999999988765 32 112 68999999999999999999999887533 5999999999
Q ss_pred hhhhhhccCCH-----------HHHHHHhCCCCchhhhHHHhHhhccccceEEEe--c-eEEEEcCCC
Q 004198 657 AADINALFGFR-----------LECIERMGENDGIWAWTRFNQLFNCLPLAALIE--K-KIICMHGGI 710 (769)
Q Consensus 657 ~~~~~~~~g~~-----------~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~--~-~i~~vHgGi 710 (769)
.........+. ......+ ......+-....++++.||....++ + +++++||++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p 141 (252)
T 1nnw_A 75 QIIAMSDPHATDPGYIDKLELPGHVKKAL-KFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSP 141 (252)
T ss_dssp HHHHHSCTTCSSSGGGGGSSCCHHHHHHH-HHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCS
T ss_pred HHhhccccccCCcccccchhhhHHHHHHH-HHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCC
Confidence 87665321110 0000000 0000112234557888999877653 3 799999998
No 34
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.68 E-value=3.4e-08 Score=98.80 Aligned_cols=68 Identities=19% Similarity=0.356 Sum_probs=55.7
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCC--------ChHHHHHHHHHhhhcCCCceEEecC
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQ--------HSLETITLLLALKIEYPENVHLIRG 653 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~--------~s~e~l~ll~~lk~~~p~~v~llrG 653 (769)
.+.+++|+||++..|.++++.+.....+ .+|++||++|+|+ .+.+++.+|..++ ..+++++|
T Consensus 27 ki~~iSD~H~~~~~l~~~l~~~~~~~~d------~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~G 96 (208)
T 1su1_A 27 KLMFASDIHGSLPATERVLELFAQSGAQ------WLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVRG 96 (208)
T ss_dssp EEEEECCCTTBHHHHHHHHHHHHHHTCS------EEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECCC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHhcCCC------EEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEEC
Confidence 4899999999999999998876422222 7899999999998 4688999988775 37999999
Q ss_pred Ccchhh
Q 004198 654 NHEAAD 659 (769)
Q Consensus 654 NHE~~~ 659 (769)
|||...
T Consensus 97 NHD~~~ 102 (208)
T 1su1_A 97 NCDSEV 102 (208)
T ss_dssp TTCCHH
T ss_pred CCchHH
Confidence 999754
No 35
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.39 E-value=2e-07 Score=90.77 Aligned_cols=61 Identities=23% Similarity=0.256 Sum_probs=47.7
Q ss_pred CEEEEccCCC--CHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHG--QFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG--~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.+.+++|+|| +..+|.++++.+. ...+ .++++||++|+ +++.+|..+. ..+++++||||..
T Consensus 24 ri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D------~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 24 RFLLISDSHVPVRMASLPDEILNSL-KEYD------GVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYP 86 (178)
T ss_dssp EEEEECCCCBTTTTCCCCHHHHHGG-GGCS------EEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCG
T ss_pred EEEEEecccCCCCHHHHHHHHHHHh-cCCC------EEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcH
Confidence 4899999997 7777888887754 2222 68899999984 7888888763 3699999999974
No 36
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=98.17 E-value=5e-06 Score=83.37 Aligned_cols=92 Identities=25% Similarity=0.313 Sum_probs=59.8
Q ss_pred CEEEEccCCCCHHH--HHHHHHH-hCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQFGD--LMRLFDE-YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~~~--l~~~l~~-~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.+.+++|+|++... |.+.|.. +.....+ .+|++||++| .+++.+|..+. ..+++++||||..
T Consensus 27 ~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D------~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~GNHD~~ 91 (215)
T 2a22_A 27 LVLLIGDLKIPYGAKELPSNFRELLATDKIN------YVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSGDLDSA 91 (215)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHHCTTCC------EEEECSCCCC-----HHHHHHHHHHC----SCEEECCCTTCCS
T ss_pred EEEEEecCCCCCChHHHHHHHHHHHhcCCCC------EEEECCCCCC-----HHHHHHHHHcC----CCEEEecCCCcCc
Confidence 48999999997632 3222222 1111122 6888999997 58888887763 3699999999976
Q ss_pred hhhhccCCHHHHHHHhCCCCchhhhHHHhHhhccccceEEEe---ceEEEEcCCCC
Q 004198 659 DINALFGFRLECIERMGENDGIWAWTRFNQLFNCLPLAALIE---KKIICMHGGIG 711 (769)
Q Consensus 659 ~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~f~~lP~~~~i~---~~i~~vHgGi~ 711 (769)
..... .+++..+|....++ .+|+++||...
T Consensus 92 ~~~~~-----------------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~~ 124 (215)
T 2a22_A 92 IFNPD-----------------------PESNGVFPEYVVVQIGEFKIGLMHGNQV 124 (215)
T ss_dssp CCBCC-----------------------GGGTBCCCSEEEEEETTEEEEEECSTTS
T ss_pred ccccC-----------------------hhhHhhCCceEEEecCCeEEEEEcCCcc
Confidence 54310 02345677654442 37999999764
No 37
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=98.12 E-value=2.7e-06 Score=85.46 Aligned_cols=72 Identities=10% Similarity=0.106 Sum_probs=53.1
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
.|.++||+|+.+..|.++++.......+ -+|++||++|+|....++..++..|+.. +..+++++||||....
T Consensus 7 ri~~iSD~H~~~~~~~~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~l~~~-~~pv~~v~GNHD~~~~ 78 (228)
T 1uf3_A 7 YILATSNPMGDLEALEKFVKLAPDTGAD------AIALIGNLMPKAAKSRDYAAFFRILSEA-HLPTAYVPGPQDAPIW 78 (228)
T ss_dssp EEEEEECCTTCHHHHHHHHTHHHHHTCS------EEEEESCSSCTTCCHHHHHHHHHHHGGG-CSCEEEECCTTSCSHH
T ss_pred EEEEEeeccCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEECCCCCchhH
Confidence 5899999999999988887765321112 6888999999997666555555555432 3469999999997653
No 38
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=98.12 E-value=1.8e-06 Score=84.86 Aligned_cols=64 Identities=16% Similarity=0.298 Sum_probs=49.5
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchhhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
.+.+++|+||++..|.++++.+.....+ .++++||++|. +++.+|..+ +..+++++||||....
T Consensus 27 ~i~~iSD~Hg~~~~l~~~l~~~~~~~~D------~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~~ 90 (190)
T 1s3l_A 27 KIGIMSDTHDHLPNIRKAIEIFNDENVE------TVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGERC 90 (190)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHSCCS------EEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCHH
T ss_pred EEEEEeeCCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchHH
Confidence 4999999999999999999876432222 68889999984 566666543 3479999999997654
No 39
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=98.01 E-value=4.3e-06 Score=81.00 Aligned_cols=57 Identities=21% Similarity=0.198 Sum_probs=42.2
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
++.++||+||+...|.++++.+.. ..+ .++++||+.- +++ ..+. ..+++++||||..
T Consensus 8 ~i~~isD~H~~~~~~~~~~~~~~~-~~d------~i~~~GD~~~------~~l---~~l~----~~~~~v~GNhD~~ 64 (176)
T 3ck2_A 8 TIIVMSDSHGDSLIVEEVRDRYVG-KVD------AVFHNGDSEL------RPD---SPLW----EGIRVVKGNMDFY 64 (176)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHTT-TSS------EEEECSCCCS------CTT---CGGG----TTEEECCCTTCCS
T ss_pred EEEEEecCCCCHHHHHHHHHHhhc-CCC------EEEECCCCch------HHH---Hhhh----CCeEEecCcccch
Confidence 489999999999999999998753 222 6888999721 222 2222 2699999999964
No 40
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=98.00 E-value=1e-05 Score=79.56 Aligned_cols=63 Identities=27% Similarity=0.350 Sum_probs=42.9
Q ss_pred CEEEEccCCCCHH--HHHHHHHH-hCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQFG--DLMRLFDE-YGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~~--~l~~~l~~-~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.+.+++|+|++.. ++.+.|.. +.....+ .++++||+++ .+++.+|..+. ..+++++||||..
T Consensus 12 ~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d------~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNhD~~ 76 (192)
T 1z2w_A 12 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQ------HILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDEN 76 (192)
T ss_dssp EEEEECCCCBTTTCSSCCHHHHTTCCTTSCS------EEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCCC
T ss_pred EEEEEecCCCCccchhHHHHHHHHhccCCCC------EEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCcCcc
Confidence 4899999999742 23333332 2211112 6888999997 67888887663 3699999999975
Q ss_pred h
Q 004198 659 D 659 (769)
Q Consensus 659 ~ 659 (769)
.
T Consensus 77 ~ 77 (192)
T 1z2w_A 77 L 77 (192)
T ss_dssp T
T ss_pred c
Confidence 4
No 41
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=97.97 E-value=1.3e-05 Score=78.99 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=47.5
Q ss_pred CEEEEccCCCCHHHH-------------HHHHHHhCC--CCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCC
Q 004198 582 PVKVFGDLHGQFGDL-------------MRLFDEYGF--PSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPE 646 (769)
Q Consensus 582 ~i~viGDiHG~~~~l-------------~~~l~~~~~--~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~ 646 (769)
.+.+++|+|+....+ .++++.+.. ...+ .++++||++++|+...+++.+|..+. .
T Consensus 3 ~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~l~~l~----~ 72 (195)
T 1xm7_A 3 MMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPED------TLYHLGDFTWHFNDKNEYLRIWKALP----G 72 (195)
T ss_dssp CEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTC------EEEECSCCBSCSCCTTSHHHHHHHSS----S
T ss_pred EEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCC------EEEECCCCCCCchhHHHHHHHHHHCC----C
Confidence 589999999644322 222333221 1122 68889999999988888888887763 3
Q ss_pred ceEEecCCcchhh
Q 004198 647 NVHLIRGNHEAAD 659 (769)
Q Consensus 647 ~v~llrGNHE~~~ 659 (769)
.+++++||||...
T Consensus 73 ~~~~v~GNhD~~~ 85 (195)
T 1xm7_A 73 RKILVMGNHDKDK 85 (195)
T ss_dssp EEEEECCTTCCCH
T ss_pred CEEEEeCCCCCch
Confidence 6999999999753
No 42
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=97.87 E-value=6e-06 Score=84.90 Aligned_cols=72 Identities=10% Similarity=0.084 Sum_probs=51.1
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh--------------------------HHHHH
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS--------------------------LETIT 635 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s--------------------------~e~l~ 635 (769)
.|.+++|||+++..|.++++.+.....+ -+|++||++|+|+.+ .+...
T Consensus 7 ri~~iSDlH~~~~~~~~~l~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 80 (260)
T 2yvt_A 7 KVLAIKNFKERFDLLPKLKGVIAEKQPD------ILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDK 80 (260)
T ss_dssp EEEEEECCTTCGGGHHHHHHHHHHHCCS------EEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred EEEEEeecCCChHHHHHHHHHHHhcCCC------EEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHH
Confidence 4899999999998888888776322222 688899999998652 12334
Q ss_pred HHHHhhhcCCCceEEecCCcchhhh
Q 004198 636 LLLALKIEYPENVHLIRGNHEAADI 660 (769)
Q Consensus 636 ll~~lk~~~p~~v~llrGNHE~~~~ 660 (769)
++..|+. .+..+++++||||....
T Consensus 81 ~l~~l~~-~~~pv~~v~GNHD~~~~ 104 (260)
T 2yvt_A 81 FFREIGE-LGVKTFVVPGKNDAPLK 104 (260)
T ss_dssp HHHHHHT-TCSEEEEECCTTSCCHH
T ss_pred HHHHHHh-cCCcEEEEcCCCCchhh
Confidence 4444443 23469999999998654
No 43
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.45 E-value=0.062 Score=57.40 Aligned_cols=217 Identities=15% Similarity=0.184 Sum_probs=120.5
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+++||..+++ |+.-... ....+.+..++.||+... ...++.||..+.+..|..-.. .+....
T Consensus 113 g~l~a~d~~tG~~~W~~~~~~------~~~~~p~~~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~-~~~~~~ 178 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTKVAG------EALSRPVVSDGLVLIHTS-------NGQLQALNEADGAVKWTVNLD-MPSLSL 178 (376)
T ss_dssp SEEEEEETTTCCEEEEEECSS------CCCSCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECC-C-----
T ss_pred CEEEEEECCCCCEEEEEeCCC------ceEcCCEEECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCC-CCceee
Confidence 579999998875 8754321 112233455788888553 236999999987778987632 111111
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCC--CCCccc--ccEEEEecCCEEEEEcccCCC
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGD--RPSARM--YATASARSDGMFLLCGGRDAS 228 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~--~P~~r~--~hsa~~~~~g~l~v~GG~~~~ 228 (769)
+...+.+..+ +.+|+ |..+ ..++.||+.+....|+.-..... ....+. ..+..+..++.+|+.+.
T Consensus 179 ~~~~~~~~~~-~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~---- 247 (376)
T 3q7m_A 179 RGESAPTTAF-GAAVV-GGDN-----GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY---- 247 (376)
T ss_dssp CCCCCCEEET-TEEEE-CCTT-----TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT----
T ss_pred cCCCCcEEEC-CEEEE-EcCC-----CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec----
Confidence 1122333334 46655 3322 35899999988888987543210 000110 11222345788887642
Q ss_pred CCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc--EEeccCC
Q 004198 229 GAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV--WLDRNGL 306 (769)
Q Consensus 229 ~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~ 306 (769)
-..++.++.. +++-.|....+. ..+.+..++.+|+... ...+++||..+++ |+.-...
T Consensus 248 ---~g~l~~~d~~-tG~~~w~~~~~~------~~~~~~~~~~l~~~~~----------~g~l~~~d~~tG~~~w~~~~~~ 307 (376)
T 3q7m_A 248 ---NGNLTALDLR-SGQIMWKRELGS------VNDFIVDGNRIYLVDQ----------NDRVMALTIDGGVTLWTQSDLL 307 (376)
T ss_dssp ---TSCEEEEETT-TCCEEEEECCCC------EEEEEEETTEEEEEET----------TCCEEEEETTTCCEEEEECTTT
T ss_pred ---CcEEEEEECC-CCcEEeeccCCC------CCCceEECCEEEEEcC----------CCeEEEEECCCCcEEEeecccC
Confidence 2357788875 345566654321 2345566888888753 2359999998764 7653111
Q ss_pred ccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCCC
Q 004198 307 VTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSP 362 (769)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~~ 362 (769)
.+...+.+..++.||+... + ..++.+|..+
T Consensus 308 --------------------~~~~~~~~~~~~~l~v~~~-~-----g~l~~~d~~t 337 (376)
T 3q7m_A 308 --------------------HRLLTSPVLYNGNLVVGDS-E-----GYLHWINVED 337 (376)
T ss_dssp --------------------TSCCCCCEEETTEEEEECT-T-----SEEEEEETTT
T ss_pred --------------------CCcccCCEEECCEEEEEeC-C-----CeEEEEECCC
Confidence 2222344556788887542 1 2366666554
No 44
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.41 E-value=0.049 Score=57.39 Aligned_cols=264 Identities=9% Similarity=-0.053 Sum_probs=141.7
Q ss_pred CCcccccceeecC-----CCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCC
Q 004198 11 PSYRTLETYWDTD-----EDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTR 85 (769)
Q Consensus 11 ~~y~~~~~~w~~~-----~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~ 85 (769)
..||+.++++... ...+.....+.++.. ++++|+.... .+.+.++|+.+.
T Consensus 20 ~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~------~~~lyv~~~~-------------------~~~v~viD~~t~ 74 (328)
T 3dsm_A 20 SYYDPATCEVENEVFYRANGFKLGDVAQSMVIR------DGIGWIVVNN-------------------SHVIFAIDINTF 74 (328)
T ss_dssp EEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE------TTEEEEEEGG-------------------GTEEEEEETTTC
T ss_pred EEEECCCCEEhhhhHhhhcCcccCccceEEEEE------CCEEEEEEcC-------------------CCEEEEEECccc
Confidence 3466666666532 122333445666666 7899998752 367999999988
Q ss_pred cE-EEecCCCCCCcccccceEEE-ECCEEEEECccCCCCCCcCcEEEEEccCCcceEE-EeeecCCCCC-CccccEEEEE
Q 004198 86 KW-TRIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWH-RVVVQGQGPG-PRYGHVMDLV 161 (769)
Q Consensus 86 ~W-~~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~-~~~~~g~~p~-~R~~hs~~~~ 161 (769)
+- ..++ .+ ..| +.++. -++++|+.... .+.++++|+.+. +-. .++. +.... ...-+.+++
T Consensus 75 ~~~~~i~-~~--~~p---~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~--~~~~~i~~-g~~~~~~~~p~~i~~- 138 (328)
T 3dsm_A 75 KEVGRIT-GF--TSP---RYIHFLSDEKAYVTQIW------DYRIFIINPKTY--EITGYIEC-PDMDMESGSTEQMVQ- 138 (328)
T ss_dssp CEEEEEE-CC--SSE---EEEEEEETTEEEEEEBS------CSEEEEEETTTT--EEEEEEEC-TTCCTTTCBCCCEEE-
T ss_pred EEEEEcC-CC--CCC---cEEEEeCCCeEEEEECC------CCeEEEEECCCC--eEEEEEEc-CCccccCCCcceEEE-
Confidence 76 3343 21 122 34444 57799997642 367999999984 333 2322 32110 001223434
Q ss_pred CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCc----ccceEE
Q 004198 162 SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP----LADAYG 237 (769)
Q Consensus 162 ~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~----l~d~~~ 237 (769)
.++.+|+..- ...+.+.++|+++. +....-..+..| +......+|.+|+.......... .+.++.
T Consensus 139 ~~~~lyv~~~----~~~~~v~viD~~t~--~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 139 YGKYVYVNCW----SYQNRILKIDTETD--KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp ETTEEEEEEC----TTCCEEEEEETTTT--EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred ECCEEEEEcC----CCCCEEEEEECCCC--eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEE
Confidence 5568888742 12357999999987 433221122222 33444577888887532211111 267899
Q ss_pred EecCCCCceEE-EeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCCCC
Q 004198 238 LLMHRNGQWEW-TLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSK 314 (769)
Q Consensus 238 ld~~~~~~W~W-~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~ 314 (769)
+|..+. +... ...+ ....-+.+++- ++.+|+..+ .++++|+++.+..........
T Consensus 208 id~~t~-~v~~~~~~~----~g~~p~~la~~~d~~~lyv~~~------------~v~~~d~~t~~~~~~~~~~~~----- 265 (328)
T 3dsm_A 208 IDAETF-TVEKQFKFK----LGDWPSEVQLNGTRDTLYWINN------------DIWRMPVEADRVPVRPFLEFR----- 265 (328)
T ss_dssp EETTTT-EEEEEEECC----TTCCCEEEEECTTSCEEEEESS------------SEEEEETTCSSCCSSCSBCCC-----
T ss_pred EECCCC-eEEEEEecC----CCCCceeEEEecCCCEEEEEcc------------EEEEEECCCCceeeeeeecCC-----
Confidence 998754 2221 1221 12223455555 677888632 489999988765321111100
Q ss_pred CCCCCCCccCcccccceEEEE--eCCEEEEEcCcCCCccccceEEecCC
Q 004198 315 GHGEHDPSLELMRRCRHASAS--IGVRIYIYGGLKGDILLDDFLVAENS 361 (769)
Q Consensus 315 ~~~~~~~~~~~~~R~~hs~~~--~~~~iyv~GG~~~~~~~~D~~~ld~~ 361 (769)
...-.++++ .+++|||....+. ..-+.+++++.+
T Consensus 266 ------------~~~p~gi~vdp~~g~lyva~~~~y-~~~~~V~v~d~~ 301 (328)
T 3dsm_A 266 ------------DTKYYGLTVNPNNGEVYVADAIDY-QQQGIVYRYSPQ 301 (328)
T ss_dssp ------------SSCEEEEEECTTTCCEEEEECTTS-SSEEEEEEECTT
T ss_pred ------------CCceEEEEEcCCCCeEEEEccccc-ccCCEEEEECCC
Confidence 122234444 3678999862111 113456677655
No 45
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=97.27 E-value=0.00024 Score=75.41 Aligned_cols=71 Identities=18% Similarity=0.272 Sum_probs=46.6
Q ss_pred CEEEEccCCC------------CHHHHHHHHHHhCC--CCCCCCCcceeEEEeccccCCCCCh-H-HHHHHHHHhhhcCC
Q 004198 582 PVKVFGDLHG------------QFGDLMRLFDEYGF--PSTAGDITYIDYLFLGDYVDRGQHS-L-ETITLLLALKIEYP 645 (769)
Q Consensus 582 ~i~viGDiHG------------~~~~l~~~l~~~~~--~~~~~~~~~~~~vfLGD~vDrG~~s-~-e~l~ll~~lk~~~p 645 (769)
.|.+++|+|. ....|.++++.+.. ...+ -+|++||++|.|... . ++..+|..+.....
T Consensus 27 ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~ 100 (330)
T 3ib7_A 27 VLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPD------AIVFTGDLADKGEPAAYRKLRGLVEPFAAQLG 100 (330)
T ss_dssp EEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCS------EEEECSCCBTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHHHHhhcC
Confidence 4899999996 26677777777642 2222 588899999998642 2 22333433322223
Q ss_pred CceEEecCCcchh
Q 004198 646 ENVHLIRGNHEAA 658 (769)
Q Consensus 646 ~~v~llrGNHE~~ 658 (769)
-.+++++||||..
T Consensus 101 ~pv~~v~GNHD~~ 113 (330)
T 3ib7_A 101 AELVWVMGNHDDR 113 (330)
T ss_dssp CEEEECCCTTSCH
T ss_pred CCEEEeCCCCCCH
Confidence 4699999999963
No 46
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.24 E-value=0.13 Score=54.87 Aligned_cols=180 Identities=14% Similarity=0.146 Sum_probs=104.2
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++.||..+++ |+.-.... ....+...+.+..++.||+... ...++.||+.+.+..|+.-.. .|..
T Consensus 153 g~l~~~d~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~v~~g~~-------~g~l~~~d~~tG~~~w~~~~~---~~~~ 221 (376)
T 3q7m_A 153 GQLQALNEADGAVKWTVNLDMP-SLSLRGESAPTTAFGAAVVGGD-------NGRVSAVLMEQGQMIWQQRIS---QATG 221 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC------CCCCCCEEETTEEEECCT-------TTEEEEEETTTCCEEEEEECC---C---
T ss_pred CeEEEEECCCCcEEEEEeCCCC-ceeecCCCCcEEECCEEEEEcC-------CCEEEEEECCCCcEEEEEecc---cCCC
Confidence 469999998876 88654321 1111223344555777777321 235999999987788986531 1111
Q ss_pred c--------cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcc
Q 004198 153 R--------YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGG 224 (769)
Q Consensus 153 R--------~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG 224 (769)
. ..... ++.++.+|+.+. ...++++|..+....|+.-... .......++.+|+...
T Consensus 222 ~~~~~~~~~~~~~p-~~~~~~v~~~~~------~g~l~~~d~~tG~~~w~~~~~~---------~~~~~~~~~~l~~~~~ 285 (376)
T 3q7m_A 222 STEIDRLSDVDTTP-VVVNGVVFALAY------NGNLTALDLRSGQIMWKRELGS---------VNDFIVDGNRIYLVDQ 285 (376)
T ss_dssp --------CCCCCC-EEETTEEEEECT------TSCEEEEETTTCCEEEEECCCC---------EEEEEEETTEEEEEET
T ss_pred CcccccccccCCCc-EEECCEEEEEec------CcEEEEEECCCCcEEeeccCCC---------CCCceEECCEEEEEcC
Confidence 1 11222 233447776542 2368999999888889864211 1233446788888642
Q ss_pred cCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc--EEe
Q 004198 225 RDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV--WLD 302 (769)
Q Consensus 225 ~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~--W~~ 302 (769)
-..++.+|.. +++-.|..... ..+...+.++.++.||+... ...+++||+.+++ |+.
T Consensus 286 -------~g~l~~~d~~-tG~~~w~~~~~---~~~~~~~~~~~~~~l~v~~~----------~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 286 -------NDRVMALTID-GGVTLWTQSDL---LHRLLTSPVLYNGNLVVGDS----------EGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp -------TCCEEEEETT-TCCEEEEECTT---TTSCCCCCEEETTEEEEECT----------TSEEEEEETTTCCEEEEE
T ss_pred -------CCeEEEEECC-CCcEEEeeccc---CCCcccCCEEECCEEEEEeC----------CCeEEEEECCCCcEEEEE
Confidence 1357888876 44556665421 11223344556888887532 2359999998875 654
No 47
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=97.23 E-value=0.00054 Score=70.49 Aligned_cols=67 Identities=19% Similarity=0.192 Sum_probs=45.9
Q ss_pred CEEEEccCCCCH------------HHHHHHHHHhCCC--CCCCCCcceeEEEeccccCCCCChH--HHHHHHHHhhhcCC
Q 004198 582 PVKVFGDLHGQF------------GDLMRLFDEYGFP--STAGDITYIDYLFLGDYVDRGQHSL--ETITLLLALKIEYP 645 (769)
Q Consensus 582 ~i~viGDiHG~~------------~~l~~~l~~~~~~--~~~~~~~~~~~vfLGD~vDrG~~s~--e~l~ll~~lk~~~p 645 (769)
.|.+++|+|+.. ..|.++++.+... ..+ -+|++||+++.|.... ++..+|..+ +
T Consensus 2 ri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l----~ 71 (274)
T 3d03_A 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD------AVVVSGDIVNCGRPEEYQVARQILGSL----N 71 (274)
T ss_dssp EEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCS------EEEEESCCBSSCCHHHHHHHHHHHTTC----S
T ss_pred EEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHhc----C
Confidence 378999999984 6788888776432 112 6888999999887421 222333222 3
Q ss_pred CceEEecCCcchh
Q 004198 646 ENVHLIRGNHEAA 658 (769)
Q Consensus 646 ~~v~llrGNHE~~ 658 (769)
-.++.++||||..
T Consensus 72 ~p~~~v~GNHD~~ 84 (274)
T 3d03_A 72 YPLYLIPGNHDDK 84 (274)
T ss_dssp SCEEEECCTTSCH
T ss_pred CCEEEECCCCCCH
Confidence 4599999999974
No 48
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=97.19 E-value=0.00033 Score=73.11 Aligned_cols=62 Identities=26% Similarity=0.295 Sum_probs=41.9
Q ss_pred CEEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh--HHHHHHHHHhhhcCCCceEEecCCcchhh
Q 004198 582 PVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS--LETITLLLALKIEYPENVHLIRGNHEAAD 659 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s--~e~l~ll~~lk~~~p~~v~llrGNHE~~~ 659 (769)
.|.+++|+|++...+ ..+..+ -+|++||++++|... .+++.+|..+. . ..++++.||||...
T Consensus 61 ri~~iSD~H~~~~~l-------~i~~~D------~vi~aGDl~~~g~~~e~~~~~~~L~~l~--~-~~v~~V~GNHD~~~ 124 (296)
T 3rl5_A 61 RFVCISDTRSRTDGI-------QMPYGD------ILLHTGDFTELGLPSEVKKFNDWLGNLP--Y-EYKIVIAGNHELTF 124 (296)
T ss_dssp EEEEEBCCTTCCTTC-------CCCSCS------EEEECSCCSSSCCHHHHHHHHHHHHTSC--C-SEEEECCCTTCGGG
T ss_pred EEEEEeeCCCCcchh-------ccCCCC------EEEECCcccCCCCHHHHHHHHHHHHhCC--C-CeEEEEcCCccccc
Confidence 499999999997643 223222 678899999999732 23344444332 1 25899999999853
No 49
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=97.03 E-value=0.00036 Score=73.41 Aligned_cols=71 Identities=20% Similarity=0.160 Sum_probs=46.9
Q ss_pred CEEEEccCCCCH-------------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCC----ChHHHHHHHH
Q 004198 582 PVKVFGDLHGQF-------------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQ----HSLETITLLL 638 (769)
Q Consensus 582 ~i~viGDiHG~~-------------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~----~s~e~l~ll~ 638 (769)
.+.+++|+|... ..|.++++.+.....+ -+|++||+++.+. ...+.+..++
T Consensus 7 ~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GD~~~~~~~~~~~~~~~~~~~~ 80 (322)
T 2nxf_A 7 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ------CVVQLGDIIDGHNRRRDASDRALDTVM 80 (322)
T ss_dssp EEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBCTHHHHTTCHHHHHHHHH
T ss_pred EEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCC------EEEECCCccCCCCCcchHHHHHHHHHH
Confidence 389999999875 5566666655322222 5888999999875 1234444343
Q ss_pred HhhhcCCCceEEecCCcchh
Q 004198 639 ALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 639 ~lk~~~p~~v~llrGNHE~~ 658 (769)
.+-...+..++++.||||..
T Consensus 81 ~~l~~~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 81 AELDACSVDVHHVWGNHEFY 100 (322)
T ss_dssp HHHHTTCSEEEECCCHHHHH
T ss_pred HHHHhcCCcEEEecCCCCcc
Confidence 33223455799999999984
No 50
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=96.96 E-value=0.00056 Score=73.18 Aligned_cols=70 Identities=21% Similarity=0.253 Sum_probs=43.0
Q ss_pred CEEEEccCC-C----C-----------HHHHHHHHHHhCCCCCCCCCcceeEEEecc-ccCCCCChHHH----HHHHHHh
Q 004198 582 PVKVFGDLH-G----Q-----------FGDLMRLFDEYGFPSTAGDITYIDYLFLGD-YVDRGQHSLET----ITLLLAL 640 (769)
Q Consensus 582 ~i~viGDiH-G----~-----------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD-~vDrG~~s~e~----l~ll~~l 640 (769)
.|+.++|+| | + ...|.++++.+.....+ -+|+.|| ++|++..+.+. ..+|..|
T Consensus 20 rilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D------~vliaGD~l~d~~~~~~~~~~~~~~~l~~L 93 (336)
T 2q8u_A 20 KILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHDLLDYLKRM 93 (336)
T ss_dssp EEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCS------EEEEESCSBSCSSCCCHHHHHHHHHHHHHH
T ss_pred EEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCC------EEEECCccccCCCCCCHHHHHHHHHHHHHH
Confidence 488999999 8 3 34455555544321112 5788999 99999877664 4555555
Q ss_pred hhcCCCceEEecCCcchhh
Q 004198 641 KIEYPENVHLIRGNHEAAD 659 (769)
Q Consensus 641 k~~~p~~v~llrGNHE~~~ 659 (769)
+.. -.++++.||||...
T Consensus 94 ~~~--~pv~~i~GNHD~~~ 110 (336)
T 2q8u_A 94 MRT--APVVVLPGNHDWKG 110 (336)
T ss_dssp HHH--SCEEECCC------
T ss_pred Hhc--CCEEEECCCCCccc
Confidence 432 35999999999865
No 51
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.91 E-value=0.07 Score=53.84 Aligned_cols=193 Identities=16% Similarity=0.079 Sum_probs=118.6
Q ss_pred cccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECC
Q 004198 31 CGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGT 110 (769)
Q Consensus 31 ~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~ 110 (769)
+=+.+... ++.||.-.|..+ .+.+..+|+.+++=..-... |..-.+.+++..++
T Consensus 22 ftqGL~~~------~~~LyestG~~g-----------------~S~v~~vD~~tgkv~~~~~l---~~~~fgeGi~~~~~ 75 (243)
T 3mbr_X 22 FTEGLFYL------RGHLYESTGETG-----------------RSSVRKVDLETGRILQRAEV---PPPYFGAGIVAWRD 75 (243)
T ss_dssp CEEEEEEE------TTEEEEEECCTT-----------------SCEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETT
T ss_pred ccccEEEE------CCEEEEECCCCC-----------------CceEEEEECCCCCEEEEEeC---CCCcceeEEEEeCC
Confidence 44466666 789999999642 35799999999986654433 33446677888899
Q ss_pred EEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCC
Q 004198 111 MVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP 190 (769)
Q Consensus 111 ~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~ 190 (769)
+||+.... .+.+++||..+.+ .-.+++ .+..|..++. .++.+|+.=| .+.++.+|+++..
T Consensus 76 ~ly~ltw~------~~~v~v~D~~tl~-~~~ti~------~~~~Gwglt~-dg~~L~vSdg------s~~l~~iDp~t~~ 135 (243)
T 3mbr_X 76 RLIQLTWR------NHEGFVYDLATLT-PRARFR------YPGEGWALTS-DDSHLYMSDG------TAVIRKLDPDTLQ 135 (243)
T ss_dssp EEEEEESS------SSEEEEEETTTTE-EEEEEE------CSSCCCEEEE-CSSCEEEECS------SSEEEEECTTTCC
T ss_pred EEEEEEee------CCEEEEEECCcCc-EEEEEe------CCCCceEEee-CCCEEEEECC------CCeEEEEeCCCCe
Confidence 99998754 4679999999832 122332 2235666654 4457888533 3579999998862
Q ss_pred ceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCc--------ccce
Q 004198 191 YVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSP--------RYQH 262 (769)
Q Consensus 191 ~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~--------R~~h 262 (769)
.-..+... ..+.+-..-......+|.+|+--- ..+++..+|..+...-.|..+.+..|.. -.-.
T Consensus 136 -~~~~I~V~-~~g~~~~~lNeLe~~~G~lyanvw------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlN 207 (243)
T 3mbr_X 136 -QVGSIKVT-AGGRPLDNLNELEWVNGELLANVW------LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLN 207 (243)
T ss_dssp -EEEEEECE-ETTEECCCEEEEEEETTEEEEEET------TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEE
T ss_pred -EEEEEEEc-cCCcccccceeeEEeCCEEEEEEC------CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceE
Confidence 12333321 111221111222345888886321 2478999999877666787776543221 1224
Q ss_pred EEEEe--CCEEEEEecc
Q 004198 263 AAVFV--GARLHVTGGA 277 (769)
Q Consensus 263 s~~~~--~~~i~V~GG~ 277 (769)
+.|.. ++++||.|-.
T Consensus 208 GIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 208 GIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEEETTTTEEEEEETT
T ss_pred EEEEcCCCCEEEEECCC
Confidence 55554 6788888764
No 52
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=96.83 E-value=0.0014 Score=71.50 Aligned_cols=71 Identities=15% Similarity=0.128 Sum_probs=47.5
Q ss_pred CEEEEccCCCCH-------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHH----HHHHHHhhhcC
Q 004198 582 PVKVFGDLHGQF-------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLET----ITLLLALKIEY 644 (769)
Q Consensus 582 ~i~viGDiHG~~-------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~----l~ll~~lk~~~ 644 (769)
.|++++|+|+.. ..|.++++.+.....+ -+|+.||++|++..+.+. +.+|..|+. .
T Consensus 22 rilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D------~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~-~ 94 (386)
T 3av0_A 22 MFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPD------VVLHSGDLFNDLRPPVKALRIAMQAFKKLHE-N 94 (386)
T ss_dssp EEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCS------EEEECSCSBSSSSCCHHHHHHHHHHHHHHHH-T
T ss_pred EEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCCCHHHHHHHHHHHHHHHh-c
Confidence 489999999762 3566777665422222 588899999999544433 344544532 2
Q ss_pred CCceEEecCCcchhh
Q 004198 645 PENVHLIRGNHEAAD 659 (769)
Q Consensus 645 p~~v~llrGNHE~~~ 659 (769)
+-.++++.||||...
T Consensus 95 ~~pv~~v~GNHD~~~ 109 (386)
T 3av0_A 95 NIKVYIVAGNHEMPR 109 (386)
T ss_dssp TCEEEECCCGGGSCS
T ss_pred CCcEEEEcCCCCCCc
Confidence 346999999999754
No 53
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=96.77 E-value=0.0016 Score=69.56 Aligned_cols=70 Identities=21% Similarity=0.216 Sum_probs=44.9
Q ss_pred CEEEEccCCCCH-------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHH----HHHHhhhcC
Q 004198 582 PVKVFGDLHGQF-------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETIT----LLLALKIEY 644 (769)
Q Consensus 582 ~i~viGDiHG~~-------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~----ll~~lk~~~ 644 (769)
.++.++|+|... ..|.++++.+.....+ -+|+.||++|++..+.+.+. +|..|+. .
T Consensus 2 kilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D------~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~-~ 74 (333)
T 1ii7_A 2 KFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVD------FILIAGDLFHSSRPSPGTLKKAIALLQIPKE-H 74 (333)
T ss_dssp EEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCS------EEEEESCSBSSSSCCHHHHHHHHHHHHHHHT-T
T ss_pred EEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCC------EEEECCCcCCCCCCCHHHHHHHHHHHHHHHH-C
Confidence 378999999864 3445555544322222 68889999998755544433 3444432 2
Q ss_pred CCceEEecCCcchh
Q 004198 645 PENVHLIRGNHEAA 658 (769)
Q Consensus 645 p~~v~llrGNHE~~ 658 (769)
+-.++++.||||..
T Consensus 75 ~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 75 SIPVFAIEGNHDRT 88 (333)
T ss_dssp TCCEEEECCTTTCC
T ss_pred CCcEEEeCCcCCCc
Confidence 34699999999975
No 54
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=96.47 E-value=0.0027 Score=70.50 Aligned_cols=71 Identities=18% Similarity=0.208 Sum_probs=45.7
Q ss_pred CEEEEccCCCC--------------------------HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh--HHH
Q 004198 582 PVKVFGDLHGQ--------------------------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS--LET 633 (769)
Q Consensus 582 ~i~viGDiHG~--------------------------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s--~e~ 633 (769)
.|.+++|+|.. ...|.++++.+.....+ -+|++||+++.|... .++
T Consensus 41 ~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~~ 114 (443)
T 2xmo_A 41 SMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTD------VLIISGDLTNNGEKTSHEEL 114 (443)
T ss_dssp EEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCS------EEEEESCCBSSCCHHHHHHH
T ss_pred EEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCHHHHHHH
Confidence 48999999973 34556666554211112 688899999988643 333
Q ss_pred HHHHHHhhhcCCCceEEecCCcchhh
Q 004198 634 ITLLLALKIEYPENVHLIRGNHEAAD 659 (769)
Q Consensus 634 l~ll~~lk~~~p~~v~llrGNHE~~~ 659 (769)
...|..++. .+-.++.++||||...
T Consensus 115 ~~~l~~l~~-~~~~~~~v~GNHD~~~ 139 (443)
T 2xmo_A 115 AKKLTQVEK-NGTQVFVVPGNHDINN 139 (443)
T ss_dssp HHHHHHHHH-TTCEEEEECCTTTSSC
T ss_pred HHHHHHHHh-CCCeEEEECCcCCCCC
Confidence 444544431 2346999999999753
No 55
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.33 E-value=0.07 Score=54.36 Aligned_cols=203 Identities=11% Similarity=0.004 Sum_probs=120.8
Q ss_pred eecCCCCCCCc--cccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCC
Q 004198 20 WDTDEDAPGPR--CGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPP 97 (769)
Q Consensus 20 w~~~~~~P~~R--~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P 97 (769)
++.+...|..+ +-+.+... ++.||+..|..+ .+.+.++|+.+++=..-... +
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~------~~~LyestG~~g-----------------~S~v~~vD~~Tgkv~~~~~l---~ 84 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYR------NGYFYESTGLNG-----------------RSSIRKVDIESGKTLQQIEL---G 84 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEE------TTEEEEEEEETT-----------------EEEEEEECTTTCCEEEEEEC---C
T ss_pred eEEEEEecCCCCcccceEEEE------CCEEEEECCCCC-----------------CceEEEEECCCCcEEEEEec---C
Confidence 33333445433 33566655 679999988542 25799999999985544333 2
Q ss_pred cccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCc
Q 004198 98 SPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRV 177 (769)
Q Consensus 98 ~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~ 177 (769)
..-.+.+++..++.||+.... .+.+++||+.+.+ .-.+++. +-.|..++. .++.+|+.-|
T Consensus 85 ~~~FgeGit~~g~~ly~ltw~------~~~v~v~D~~t~~-~~~ti~~------~~eG~glt~-dg~~L~~SdG------ 144 (262)
T 3nol_A 85 KRYFGEGISDWKDKIVGLTWK------NGLGFVWNIRNLR-QVRSFNY------DGEGWGLTH-NDQYLIMSDG------ 144 (262)
T ss_dssp TTCCEEEEEEETTEEEEEESS------SSEEEEEETTTCC-EEEEEEC------SSCCCCEEE-CSSCEEECCS------
T ss_pred CccceeEEEEeCCEEEEEEee------CCEEEEEECccCc-EEEEEEC------CCCceEEec-CCCEEEEECC------
Confidence 233456678889999998663 4679999999832 2233322 225666643 4457777433
Q ss_pred cCceeEEeCCCCCceEEEcCCCC-CCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCC
Q 004198 178 LSDAWALDTAQKPYVWQRLNPEG-DRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAP 256 (769)
Q Consensus 178 ~~dv~~~d~~~~~~~W~~v~~~~-~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P 256 (769)
.+.++.+|+++.. .-..+.... ..|..... .....+|.+|+-- ...+++.++|..+...-.|...++..|
T Consensus 145 s~~i~~iDp~T~~-v~~~I~V~~~g~~~~~lN--ELe~~~G~lyan~------w~~~~I~vIDp~tG~V~~~Id~~~L~~ 215 (262)
T 3nol_A 145 TPVLRFLDPESLT-PVRTITVTAHGEELPELN--ELEWVDGEIFANV------WQTNKIVRIDPETGKVTGIIDLNGILA 215 (262)
T ss_dssp SSEEEEECTTTCS-EEEEEECEETTEECCCEE--EEEEETTEEEEEE------TTSSEEEEECTTTCBEEEEEECTTGGG
T ss_pred CCeEEEEcCCCCe-EEEEEEeccCCccccccc--eeEEECCEEEEEE------ccCCeEEEEECCCCcEEEEEECCcCcc
Confidence 3579999998752 223333211 11111111 1223488888632 124789999998776667777764432
Q ss_pred C-------cccceEEEEe--CCEEEEEecc
Q 004198 257 S-------PRYQHAAVFV--GARLHVTGGA 277 (769)
Q Consensus 257 ~-------~R~~hs~~~~--~~~i~V~GG~ 277 (769)
. .-.-.+.|+. .+++||.|-.
T Consensus 216 ~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 216 EAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp GSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred ccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 1 1233556665 5789998864
No 56
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.29 E-value=0.46 Score=55.52 Aligned_cols=124 Identities=16% Similarity=0.133 Sum_probs=73.5
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCc--EEEecCCCCCCcc-----cccceEEEECCEEEEECc
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK--WTRIRPAGEPPSP-----RAAHAAAAVGTMVVFQGG 117 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~--W~~l~~~g~~P~~-----R~~hs~~~~~~~Iyv~GG 117 (769)
+++||+... .+.++.+|..+++ |+.-........+ ....+.+..++.||+...
T Consensus 77 ~g~vyv~~~--------------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~ 136 (677)
T 1kb0_A 77 DGIMYVSAS--------------------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW 136 (677)
T ss_dssp TTEEEEECG--------------------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT
T ss_pred CCEEEEECC--------------------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC
Confidence 788888754 2579999999875 9864332100000 112345567888888643
Q ss_pred cCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC-CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEc
Q 004198 118 IGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG-PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRL 196 (769)
Q Consensus 118 ~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~-~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v 196 (769)
...++++|..+.+..|+.-... ..+. .....+.++.+ +.+|+..+......-..++.||.++....|+.-
T Consensus 137 -------dg~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 137 -------DGRLIALDAATGKEVWHQNTFE-GQKGSLTITGAPRVFK-GKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp -------TSEEEEEETTTCCEEEEEETTT-TCCSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred -------CCEEEEEECCCCCEEeeecCCc-CcCcCcccccCcEEEC-CEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 2459999999988889875210 1111 11112232344 466664432222234679999999988889875
Q ss_pred C
Q 004198 197 N 197 (769)
Q Consensus 197 ~ 197 (769)
.
T Consensus 208 ~ 208 (677)
T 1kb0_A 208 S 208 (677)
T ss_dssp S
T ss_pred c
Confidence 4
No 57
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.17 E-value=0.74 Score=48.13 Aligned_cols=189 Identities=7% Similarity=0.016 Sum_probs=99.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCC-cccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPP-SPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P-~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.++++|+.+++-...-..+... ....-+.++..++++|+..- + ..+.+.++|+.+.+ .......+..|
T Consensus 105 ~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~-~----~~~~v~viD~~t~~--~~~~i~~g~~p--- 174 (328)
T 3dsm_A 105 YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW-S----YQNRILKIDTETDK--VVDELTIGIQP--- 174 (328)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC-T----TCCEEEEEETTTTE--EEEEEECSSCB---
T ss_pred CeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC-C----CCCEEEEEECCCCe--EEEEEEcCCCc---
Confidence 57999999998755322222200 00122345557889999742 0 23579999999843 33322223222
Q ss_pred cccEEEEECCcEEEEEecCCCCCc-----cCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec-CCEEEEEcccCC
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRV-----LSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-DGMFLLCGGRDA 227 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~-----~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~-~g~l~v~GG~~~ 227 (769)
+.+++..++++|+....+.... .+.++++|+.+. +..+.-.. |....-+..+... ++.+|+..+
T Consensus 175 --~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~--~v~~~~~~---~~g~~p~~la~~~d~~~lyv~~~--- 244 (328)
T 3dsm_A 175 --TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF--TVEKQFKF---KLGDWPSEVQLNGTRDTLYWINN--- 244 (328)
T ss_dssp --CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT--EEEEEEEC---CTTCCCEEEEECTTSCEEEEESS---
T ss_pred --cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC--eEEEEEec---CCCCCceeEEEecCCCEEEEEcc---
Confidence 2344445557776543221111 367999999887 44322111 1111123344443 567887542
Q ss_pred CCCcccceEEEecCCCCceEEEeCCCCCCC-cccceEEEE--eCCEEEEEecccCCCCcccCCCcEEEEECCCC
Q 004198 228 SGAPLADAYGLLMHRNGQWEWTLAPGVAPS-PRYQHAAVF--VGARLHVTGGALRGGRAIEGEAAVAVLDTAAG 298 (769)
Q Consensus 228 ~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~-~R~~hs~~~--~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~ 298 (769)
.++.+|..+. +.... ...+. ...-.++++ .++.+||...... ...+.|.+||++..
T Consensus 245 ------~v~~~d~~t~---~~~~~-~~~~~~~~~p~gi~vdp~~g~lyva~~~~y-----~~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 245 ------DIWRMPVEAD---RVPVR-PFLEFRDTKYYGLTVNPNNGEVYVADAIDY-----QQQGIVYRYSPQGK 303 (328)
T ss_dssp ------SEEEEETTCS---SCCSS-CSBCCCSSCEEEEEECTTTCCEEEEECTTS-----SSEEEEEEECTTCC
T ss_pred ------EEEEEECCCC---ceeee-eeecCCCCceEEEEEcCCCCeEEEEccccc-----ccCCEEEEECCCCC
Confidence 6888888644 11111 11111 233445555 3788999862111 11456999999843
No 58
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.85 E-value=1.1 Score=51.24 Aligned_cols=124 Identities=13% Similarity=0.137 Sum_probs=72.6
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEEC-CCCc--EEEecCCCCCCc--c---cccceEEEECCEEEEEC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDV-LTRK--WTRIRPAGEPPS--P---RAAHAAAAVGTMVVFQG 116 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~-~~~~--W~~l~~~g~~P~--~---R~~hs~~~~~~~Iyv~G 116 (769)
+++||+.... .+.++++|. .+++ |+.-........ . ....+.+..++.||+..
T Consensus 62 ~g~vyv~~~~-------------------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~ 122 (571)
T 2ad6_A 62 GDMMYVHSAF-------------------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQ 122 (571)
T ss_dssp TTEEEEECST-------------------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC
T ss_pred CCEEEEEeCC-------------------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEe
Confidence 7889887652 246999999 7765 986432210000 0 11223456688998875
Q ss_pred ccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC-ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEE
Q 004198 117 GIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP-RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQR 195 (769)
Q Consensus 117 G~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~-R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~ 195 (769)
. ...++++|..+.+..|+.-.. ..+.. ....+.++.+ ..+|+..+......-..++.||.++....|+.
T Consensus 123 ~-------dg~l~alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 123 A-------NGHLLALDAKTGKINWEVEVC--DPKVGSTLTQAPFVAK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp T-------TSEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred C-------CCEEEEEECCCCCEEEEecCC--CCCccceeccCCEEEC-CEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 3 245999999998888986521 11110 1111222344 46666443211112357999999998888976
Q ss_pred cC
Q 004198 196 LN 197 (769)
Q Consensus 196 v~ 197 (769)
-.
T Consensus 193 ~~ 194 (571)
T 2ad6_A 193 FA 194 (571)
T ss_dssp ES
T ss_pred cc
Confidence 54
No 59
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.76 E-value=0.16 Score=51.86 Aligned_cols=189 Identities=9% Similarity=-0.050 Sum_probs=111.2
Q ss_pred ccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCE
Q 004198 32 GHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTM 111 (769)
Q Consensus 32 ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~ 111 (769)
.+.+... ++.||+..|.. +.+.++|+.+++=..-. . |..-.+.+++..++.
T Consensus 57 tqGL~~~------~~~Ly~stG~~-------------------g~v~~iD~~Tgkv~~~~-l---~~~~FgeGit~~g~~ 107 (268)
T 3nok_A 57 TQGLVFH------QGHFFESTGHQ-------------------GTLRQLSLESAQPVWME-R---LGNIFAEGLASDGER 107 (268)
T ss_dssp EEEEEEE------TTEEEEEETTT-------------------TEEEECCSSCSSCSEEE-E---CTTCCEEEEEECSSC
T ss_pred cceEEEE------CCEEEEEcCCC-------------------CEEEEEECCCCcEEeEE-C---CCCcceeEEEEeCCE
Confidence 3555555 78999998853 34899999988643322 2 222345667888899
Q ss_pred EEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCc
Q 004198 112 VVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPY 191 (769)
Q Consensus 112 Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~ 191 (769)
||+.... .+.+++||+.+.+ .-.+++. +-.|..++.-+ +.+|+.-| .+.++.+|+++..
T Consensus 108 Ly~ltw~------~~~v~V~D~~Tl~-~~~ti~~------~~eGwGLt~Dg-~~L~vSdG------s~~l~~iDp~T~~- 166 (268)
T 3nok_A 108 LYQLTWT------EGLLFTWSGMPPQ-RERTTRY------SGEGWGLCYWN-GKLVRSDG------GTMLTFHEPDGFA- 166 (268)
T ss_dssp EEEEESS------SCEEEEEETTTTE-EEEEEEC------SSCCCCEEEET-TEEEEECS------SSEEEEECTTTCC-
T ss_pred EEEEEcc------CCEEEEEECCcCc-EEEEEeC------CCceeEEecCC-CEEEEECC------CCEEEEEcCCCCe-
Confidence 9998663 4679999999832 1233322 23456665444 58888644 3579999998862
Q ss_pred eEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCC--------CcccceE
Q 004198 192 VWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAP--------SPRYQHA 263 (769)
Q Consensus 192 ~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P--------~~R~~hs 263 (769)
.-..+... ..+.+-..-......+|.+|+-- ...+++..+|..+...-.|..+.+..| ..-.-.+
T Consensus 167 v~~~I~V~-~~g~~v~~lNeLe~~dG~lyanv------w~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNG 239 (268)
T 3nok_A 167 LVGAVQVK-LRGQPVELINELECANGVIYANI------WHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNG 239 (268)
T ss_dssp EEEEEECE-ETTEECCCEEEEEEETTEEEEEE------TTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEE
T ss_pred EEEEEEeC-CCCcccccccccEEeCCEEEEEE------CCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEE
Confidence 22333321 11122111122233488888621 124688999998765667777653211 1112244
Q ss_pred EEEe--CCEEEEEecc
Q 004198 264 AVFV--GARLHVTGGA 277 (769)
Q Consensus 264 ~~~~--~~~i~V~GG~ 277 (769)
.|.. ++++||.|-.
T Consensus 240 IA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 240 IAVEPGSGRIFMTGKL 255 (268)
T ss_dssp EEECTTTCCEEEEETT
T ss_pred EEEcCCCCEEEEeCCC
Confidence 5554 5788888754
No 60
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=95.73 E-value=0.01 Score=65.52 Aligned_cols=50 Identities=16% Similarity=0.139 Sum_probs=35.8
Q ss_pred EEEEccCCCC------------HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHH
Q 004198 583 VKVFGDLHGQ------------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLL 638 (769)
Q Consensus 583 i~viGDiHG~------------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~ 638 (769)
|+.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++
T Consensus 79 ilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~ps~~a~~~~~ 140 (472)
T 4fbk_A 79 ILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQAL 140 (472)
T ss_dssp EEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCSBSSSSCCHHHHHHHH
T ss_pred EEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHH
Confidence 8999999974 33566666655422222 68889999999999888776543
No 61
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=95.68 E-value=0.01 Score=65.12 Aligned_cols=71 Identities=24% Similarity=0.219 Sum_probs=48.6
Q ss_pred EEEEccCCCCH------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHHHhhhc-------
Q 004198 583 VKVFGDLHGQF------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIE------- 643 (769)
Q Consensus 583 i~viGDiHG~~------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~------- 643 (769)
|+.++|+|-.. ..|.++++.+.....+ -+|+.||++|++..+.+++..++.+-.+
T Consensus 35 ilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D------~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~ 108 (431)
T 3t1i_A 35 ILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVD------FILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRP 108 (431)
T ss_dssp EEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSC
T ss_pred EEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCC------EEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCc
Confidence 89999999532 3555666554322222 6888999999999888777655443221
Q ss_pred -----------------------------CCCceEEecCCcchhh
Q 004198 644 -----------------------------YPENVHLIRGNHEAAD 659 (769)
Q Consensus 644 -----------------------------~p~~v~llrGNHE~~~ 659 (769)
..-.|+++.||||...
T Consensus 109 ~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~ 153 (431)
T 3t1i_A 109 VQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPT 153 (431)
T ss_dssp CCCEECSCC------------------CCBCSCEEECCCSSSCCB
T ss_pred ccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcc
Confidence 1346999999999763
No 62
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=95.68 E-value=0.0053 Score=66.72 Aligned_cols=69 Identities=19% Similarity=0.210 Sum_probs=44.5
Q ss_pred CEEEEccCCCCHH----------------HHHHHHHHhCCCCCCCCCcceeEEEecccc-CCCCChHHHH----HHHHHh
Q 004198 582 PVKVFGDLHGQFG----------------DLMRLFDEYGFPSTAGDITYIDYLFLGDYV-DRGQHSLETI----TLLLAL 640 (769)
Q Consensus 582 ~i~viGDiHG~~~----------------~l~~~l~~~~~~~~~~~~~~~~~vfLGD~v-DrG~~s~e~l----~ll~~l 640 (769)
.++.++|+|.... .|.++++.+.....+ -+|+.||++ |++..+.+.+ .+|..|
T Consensus 2 rilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D------~vliaGDl~hd~~~~~~~~~~~~~~~l~~l 75 (379)
T 3tho_B 2 KILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHDLLDYLKRM 75 (379)
T ss_dssp EEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCS------EEEECSCCBSCSSSCCHHHHHHHHHHHHHH
T ss_pred eEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCC------EEEECCCccccCCCCCHHHHHHHHHHHHHH
Confidence 3788999997543 445555443211112 578899999 8887765544 334444
Q ss_pred hhcCCCceEEecCCcchh
Q 004198 641 KIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 641 k~~~p~~v~llrGNHE~~ 658 (769)
+.. -.++++.||||..
T Consensus 76 ~~~--~~v~~i~GNHD~~ 91 (379)
T 3tho_B 76 MRT--APVVVLPGNQDWK 91 (379)
T ss_dssp HHH--SCEEECCCTTSCT
T ss_pred HhC--CCEEEEcCCCccc
Confidence 433 4699999999954
No 63
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.59 E-value=0.75 Score=49.46 Aligned_cols=188 Identities=13% Similarity=0.062 Sum_probs=93.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++++|+.+++..+....+...........+.+ ++.+|+.|+. ...+++||+.+.+..+ .+.. ..
T Consensus 144 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~------d~~v~~~d~~~~~~~~-~~~~-----~~ 211 (433)
T 3bws_A 144 EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ------ANAVHVFDLKTLAYKA-TVDL-----TG 211 (433)
T ss_dssp SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG------GTEEEEEETTTCCEEE-EEEC-----SS
T ss_pred CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC------CCEEEEEECCCceEEE-EEcC-----CC
Confidence 4699999999887765432110011111122233 5678877763 2468999998743222 2211 11
Q ss_pred ccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCC-
Q 004198 153 RYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGA- 230 (769)
Q Consensus 153 R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~- 230 (769)
..-..++.. .++.+|+.++.++ .+.+||+.+. +....-.. ...-..+....++..+++++......
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~-----~i~~~d~~~~--~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISE-----DISVIDRKTK--LEIRKTDK-----IGLPRGLLLSKDGKELYIAQFSASNQE 279 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTT-----EEEEEETTTT--EEEEECCC-----CSEEEEEEECTTSSEEEEEEEESCTTC
T ss_pred CCeeEEEEcCCCCEEEEEecCCC-----cEEEEECCCC--cEEEEecC-----CCCceEEEEcCCCCEEEEEECCCCccc
Confidence 112233333 3446767665443 6899999877 43332221 11123444456665555554432211
Q ss_pred -cccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 231 -PLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 231 -~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
.-..++.++..+. ....... .+..-..+++. +..+|+.++. ...+.+||+.+.+-.
T Consensus 280 ~~dg~i~~~d~~~~-~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~---------~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 280 SGGGRLGIYSMDKE-KLIDTIG-----PPGNKRHIVSGNTENKIYVSDMC---------CSKIEVYDLKEKKVQ 338 (433)
T ss_dssp SCCEEEEEEETTTT-EEEEEEE-----EEECEEEEEECSSTTEEEEEETT---------TTEEEEEETTTTEEE
T ss_pred cCCCeEEEEECCCC-cEEeecc-----CCCCcceEEECCCCCEEEEEecC---------CCEEEEEECCCCcEE
Confidence 1245677777643 2121110 01111223332 3467777653 245899999876543
No 64
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=95.56 E-value=0.015 Score=63.66 Aligned_cols=51 Identities=16% Similarity=0.131 Sum_probs=36.3
Q ss_pred CEEEEccCCCC------------HHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChHHHHHHHH
Q 004198 582 PVKVFGDLHGQ------------FGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLL 638 (769)
Q Consensus 582 ~i~viGDiHG~------------~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~ 638 (769)
.++.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++
T Consensus 15 rilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~p~~~~~~~~~ 77 (417)
T 4fbw_A 15 RILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQAL 77 (417)
T ss_dssp EEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHH
T ss_pred EEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHH
Confidence 48999999975 34566666665322222 68889999999999888776543
No 65
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.55 E-value=0.84 Score=46.60 Aligned_cols=205 Identities=12% Similarity=0.046 Sum_probs=118.7
Q ss_pred ccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCE
Q 004198 32 GHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTM 111 (769)
Q Consensus 32 ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~ 111 (769)
-|.+.+.+ +++||+..|... .+.+..+|+.+++=..--+. +....+.+++..++.
T Consensus 23 ~~Gl~~~~-----dg~Lyvstg~~~-----------------~s~v~~iD~~tg~v~~~i~l---~~~~fgeGi~~~g~~ 77 (266)
T 2iwa_A 23 TQGLVYAE-----NDTLFESTGLYG-----------------RSSVRQVALQTGKVENIHKM---DDSYFGEGLTLLNEK 77 (266)
T ss_dssp EEEEEECS-----TTEEEEEECSTT-----------------TCEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTE
T ss_pred cccEEEeC-----CCeEEEECCCCC-----------------CCEEEEEECCCCCEEEEEec---CCCcceEEEEEeCCE
Confidence 35666541 369999877421 36799999999985543332 222344567778899
Q ss_pred EEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCc
Q 004198 112 VVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPY 191 (769)
Q Consensus 112 Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~ 191 (769)
||+.... .+.+++||..+.+ .-.+++. + .| .+..++ .+++.+|+.-| .+.++.+|+++..
T Consensus 78 lyv~t~~------~~~v~viD~~t~~-v~~~i~~-g-~~---~g~glt-~Dg~~l~vs~g------s~~l~viD~~t~~- 137 (266)
T 2iwa_A 78 LYQVVWL------KNIGFIYDRRTLS-NIKNFTH-Q-MK---DGWGLA-TDGKILYGSDG------TSILYEIDPHTFK- 137 (266)
T ss_dssp EEEEETT------CSEEEEEETTTTE-EEEEEEC-C-SS---SCCEEE-ECSSSEEEECS------SSEEEEECTTTCC-
T ss_pred EEEEEec------CCEEEEEECCCCc-EEEEEEC-C-CC---CeEEEE-ECCCEEEEECC------CCeEEEEECCCCc-
Confidence 9998653 4669999998832 1223432 2 22 344443 35567887533 4679999998862
Q ss_pred eEEEcCCCC-CCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCC--------CCcccce
Q 004198 192 VWQRLNPEG-DRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVA--------PSPRYQH 262 (769)
Q Consensus 192 ~W~~v~~~~-~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~--------P~~R~~h 262 (769)
.-..+.... ..|..+.. .+. ..++.+|+--. ..+++..+|..+...-.|..+.+.. +..-.-+
T Consensus 138 v~~~I~Vg~~~~p~~~~n-ele-~~dg~lyvn~~------~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~n 209 (266)
T 2iwa_A 138 LIKKHNVKYNGHRVIRLN-ELE-YINGEVWANIW------QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLN 209 (266)
T ss_dssp EEEEEECEETTEECCCEE-EEE-EETTEEEEEET------TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEE
T ss_pred EEEEEEECCCCcccccce-eEE-EECCEEEEecC------CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceE
Confidence 123333211 01111222 222 23788886421 2478999999876555666664221 1111225
Q ss_pred EEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCC
Q 004198 263 AAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAG 298 (769)
Q Consensus 263 s~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~ 298 (769)
+.++. ++++||.|+.. +.++..++.+.
T Consensus 210 GIa~~~~~~~lfVTgk~~---------~~v~~i~l~~~ 238 (266)
T 2iwa_A 210 GIAWDQENKRIFVTGKLW---------PKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTTEEEEEETTC---------SEEEEEEEEEC
T ss_pred EEEEcCCCCEEEEECCCC---------CeEEEEEEecc
Confidence 55555 57899998853 34666665443
No 66
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.23 E-value=3.3 Score=48.08 Aligned_cols=124 Identities=15% Similarity=0.092 Sum_probs=72.7
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCc--EEEecCCCCCCc-----ccccceEEEECCEEEEECc
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK--WTRIRPAGEPPS-----PRAAHAAAAVGTMVVFQGG 117 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~--W~~l~~~g~~P~-----~R~~hs~~~~~~~Iyv~GG 117 (769)
+++||+... .+.++.+|..+++ |+.-........ .....+.+..+++||+...
T Consensus 66 ~g~vyv~~~--------------------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~ 125 (668)
T 1kv9_A 66 DGVIYTSMS--------------------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL 125 (668)
T ss_dssp TTEEEEEEG--------------------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT
T ss_pred CCEEEEECC--------------------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC
Confidence 788888654 2479999998875 986432210000 0011234556788888643
Q ss_pred cCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcC
Q 004198 118 IGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLN 197 (769)
Q Consensus 118 ~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~ 197 (769)
...++.+|..+.+..|+.-.. ..........+.++.++ .+|+..+.........++.||.++....|+.-.
T Consensus 126 -------dg~l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 126 -------DGRLIALDAKTGKAIWSQQTT-DPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp -------TSEEEEEETTTCCEEEEEECS-CTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred -------CCEEEEEECCCCCEeeeeccC-CCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 245999999998888987531 11111111223334444 666643322222346799999999888898753
No 67
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.13 E-value=5.9 Score=46.12 Aligned_cols=115 Identities=13% Similarity=0.067 Sum_probs=65.4
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcc-----cccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSP-----RAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG 147 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~-----R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g 147 (769)
+.++.+|..+++ |+.-......... ....+.+..++.||+... ...++.+|..+.+..|+.-....
T Consensus 80 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l~AlDa~TG~~~W~~~~~~~ 152 (689)
T 1yiq_A 80 SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRLEAIDAKTGQRAWSVDTRAD 152 (689)
T ss_dssp GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCSC
T ss_pred CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCEEEEEECCCCCEeeeecCcCC
Confidence 569999998875 9854322100000 011234566888888653 24599999999888898763201
Q ss_pred CCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcC
Q 004198 148 QGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLN 197 (769)
Q Consensus 148 ~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~ 197 (769)
.........+.++.++ .+|+..+......-..++.||.++....|+.-.
T Consensus 153 ~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 153 HKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp TTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecc
Confidence 1010111122334444 666633221112345799999999988898653
No 68
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.04 E-value=2 Score=49.25 Aligned_cols=126 Identities=10% Similarity=0.074 Sum_probs=71.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEEC-CCCc--EEEecCCCCCCc--cc---ccceEEE--ECCE---
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDV-LTRK--WTRIRPAGEPPS--PR---AAHAAAA--VGTM--- 111 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~-~~~~--W~~l~~~g~~P~--~R---~~hs~~~--~~~~--- 111 (769)
+++||+.+.. .+.++++|. .+++ |+.-........ .+ ...+.+. .++.
T Consensus 62 ~g~vyv~~~~-------------------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~ 122 (599)
T 1w6s_A 62 DGKMYIHTSF-------------------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPA 122 (599)
T ss_dssp TTEEEEECST-------------------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCC
T ss_pred CCEEEEEeCC-------------------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCccee
Confidence 8899987652 246999999 7775 986433210000 11 1123344 4666
Q ss_pred -EEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCC
Q 004198 112 -VVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP 190 (769)
Q Consensus 112 -Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~ 190 (769)
||+... ...++.+|..+.+..|+.-.. ...+......+-++.++ .+|+..+.........++.||.++..
T Consensus 123 rV~v~t~-------dg~l~AlDa~TG~~~W~~~~~-~~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~ 193 (599)
T 1w6s_A 123 LILKTQL-------DGNVAALNAETGETVWKVENS-DIKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKTGE 193 (599)
T ss_dssp EEEEECT-------TSEEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTTCC
T ss_pred EEEEEcC-------CCEEEEEECCCCCEEEeecCC-CCCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCCCc
Confidence 887543 245999999998888986521 10000011112234444 66654321111234579999999988
Q ss_pred ceEEEcCC
Q 004198 191 YVWQRLNP 198 (769)
Q Consensus 191 ~~W~~v~~ 198 (769)
..|+.-..
T Consensus 194 ~~W~~~~~ 201 (599)
T 1w6s_A 194 QVWRAYAT 201 (599)
T ss_dssp EEEEEESS
T ss_pred EEEEEcCC
Confidence 88987543
No 69
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.96 E-value=3 Score=42.37 Aligned_cols=183 Identities=13% Similarity=0.173 Sum_probs=97.8
Q ss_pred CCcEEEEECCCCc--EEEecCCCCCCcccccceEEE-ECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 74 TNSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 74 ~~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
.+.++.+|..+++ |+.-...+ ...|.++. -++.+++.+ .+.++.||+ +.+..|+.-. +
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~-----~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G~~~W~~~~-----~ 74 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKG-----WECNSVAATKAGEILFSY--------SKGAKMITR-DGRELWNIAA-----P 74 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTT-----CCCCEEEECTTSCEEEEC--------BSEEEEECT-TSCEEEEEEC-----C
T ss_pred CCEEEEEECCCCeEEEEeCCCcc-----CCCcCeEECCCCCEEEeC--------CCCEEEECC-CCCEEEEEcC-----C
Confidence 3678999998775 77543210 12244444 356777732 245999999 6556787542 2
Q ss_pred CCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCC-CCCCcccccEEEEecCCEEEEEcccCCCC
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEG-DRPSARMYATASARSDGMFLLCGGRDASG 229 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~-~~P~~r~~hsa~~~~~g~l~v~GG~~~~~ 229 (769)
....-+++....++.+++....+ ...++.+|.+.+ ..|+.....+ ..+... .+.+....+|.+++....
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk-~l~~~~~~~~~~~~~~~-~~~v~~~~~G~~lv~~~~---- 144 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGE-VLSKTEFETGIERPHAQ-FRQINKNKKGNYLVPLFA---- 144 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSC-EEEEEEECCSCSSGGGS-CSCCEECTTSCEEEEETT----
T ss_pred CCccccccEECCCCCEEEEecCC----CCEEEEEeCCCC-EEEEEeccCCCCccccc-ccCceECCCCCEEEEecC----
Confidence 12233455555555666654321 235788887443 4555432211 111111 122334456666665431
Q ss_pred CcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCC--cEEec
Q 004198 230 APLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAG--VWLDR 303 (769)
Q Consensus 230 ~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~--~W~~~ 303 (769)
-..+..||.. ++..|....+..| ++++.. ++.++|.+.. ...+..||++++ .|+.-
T Consensus 145 --~~~v~~~d~~--G~~~w~~~~~~~~-----~~~~~~~~g~~~v~~~~---------~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 145 --TSEVREIAPN--GQLLNSVKLSGTP-----FSSAFLDNGDCLVACGD---------AHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp --TTEEEEECTT--SCEEEEEECSSCC-----CEEEECTTSCEEEECBT---------TSEEEEECTTTCCEEEEEE
T ss_pred --CCEEEEECCC--CCEEEEEECCCCc-----cceeEcCCCCEEEEeCC---------CCeEEEEeCcCCcEEEEec
Confidence 2457788876 5555554433222 334444 6778777652 234899999865 46654
No 70
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.58 E-value=5.7 Score=45.27 Aligned_cols=122 Identities=19% Similarity=0.274 Sum_probs=69.9
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCc--EEEecCCCCCCccc---ccceEEEECCEEEEECccC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRK--WTRIRPAGEPPSPR---AAHAAAAVGTMVVFQGGIG 119 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~--W~~l~~~g~~P~~R---~~hs~~~~~~~Iyv~GG~~ 119 (769)
+++||+.... +.++++|..+++ |+.-........+. ...+.+..++.||+...
T Consensus 68 ~g~vyv~~~~--------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-- 125 (582)
T 1flg_A 68 DGVIYVTASY--------------------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-- 125 (582)
T ss_dssp TTEEEEEETT--------------------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET--
T ss_pred CCEEEEEcCC--------------------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC--
Confidence 8889887652 239999998875 98754321100011 11334567888888532
Q ss_pred CCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc--ccEEEEECC----cEEEEEecCCC-CCccCceeEEeCCCCCce
Q 004198 120 PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY--GHVMDLVSQ----RYLVSVSGNDG-KRVLSDAWALDTAQKPYV 192 (769)
Q Consensus 120 ~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~--~hs~~~~~~----~~l~v~GG~~~-~~~~~dv~~~d~~~~~~~ 192 (769)
...++.+|..+.+..|+.-.. . +...+ ..+-++.++ +.++++|...+ ......++.||.++....
T Consensus 126 -----dg~l~AlD~~TG~~~W~~~~~--~-~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~ 197 (582)
T 1flg_A 126 -----DASVVALNKNTGKVVWKKKFA--D-HGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEI 197 (582)
T ss_dssp -----TTEEEEEESSSCCEEEEEECS--C-GGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEE
T ss_pred -----CCEEEEEECCCCCEEeeecCC--C-CCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEE
Confidence 245999999998888986531 1 11111 112222332 11334443211 123457999999998889
Q ss_pred EEEc
Q 004198 193 WQRL 196 (769)
Q Consensus 193 W~~v 196 (769)
|+.-
T Consensus 198 W~~~ 201 (582)
T 1flg_A 198 WMRP 201 (582)
T ss_dssp EEEE
T ss_pred eecC
Confidence 9764
No 71
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.32 E-value=3.1 Score=44.91 Aligned_cols=227 Identities=11% Similarity=0.010 Sum_probs=112.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
..++.+|.....-..+.... ......+..-++..+++++... ....++++|+.+. +...+. ..+. .
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~----~~v~~~~~Spdg~~la~~s~~~---~~~~i~~~d~~tg--~~~~l~---~~~~--~ 224 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP----QPLMSPAWSPDGSKLAYVTFES---GRSALVIQTLANG--AVRQVA---SFPR--H 224 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES----SCEEEEEECTTSSEEEEEECTT---SSCEEEEEETTTC--CEEEEE---CCSS--C
T ss_pred ceEEEEcCCCCCCEEEeCCC----CcceeeEEcCCCCEEEEEEecC---CCcEEEEEECCCC--cEEEee---cCCC--c
Confidence 57899999876655554221 0111111111343344443321 1257999999984 455553 1111 1
Q ss_pred ccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCccc
Q 004198 155 GHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLA 233 (769)
Q Consensus 155 ~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~ 233 (769)
-.+.... +++.|++.+..++ ...+|.+|+.+. +...+... .....+.....++..+++++.... ..
T Consensus 225 ~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~--~~~~l~~~-----~~~~~~~~~spdg~~l~~~s~~~g---~~ 291 (415)
T 2hqs_A 225 NGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASG--QIRQVTDG-----RSNNTEPTWFPDSQNLAFTSDQAG---RP 291 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTS---SCEEEEEETTTC--CEEECCCC-----SSCEEEEEECTTSSEEEEEECTTS---SC
T ss_pred ccCEEEcCCCCEEEEEEecCC---CceEEEEECCCC--CEEeCcCC-----CCcccceEECCCCCEEEEEECCCC---Cc
Confidence 2233233 3334554554333 246999999887 55555432 111223334467765565543211 24
Q ss_pred ceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCCC
Q 004198 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSRT 312 (769)
Q Consensus 234 d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~ 312 (769)
.+|.++.... ....... ......+.++- +++.+++++...+ ...++++|+.+++...+...
T Consensus 292 ~i~~~d~~~~---~~~~l~~---~~~~~~~~~~spdG~~l~~~~~~~g------~~~i~~~d~~~~~~~~l~~~------ 353 (415)
T 2hqs_A 292 QVYKVNINGG---APQRITW---EGSQNQDADVSSDGKFMVMVSSNGG------QQHIAKQDLATGGVQVLSST------ 353 (415)
T ss_dssp EEEEEETTSS---CCEECCC---SSSEEEEEEECTTSSEEEEEEECSS------CEEEEEEETTTCCEEECCCS------
T ss_pred EEEEEECCCC---CEEEEec---CCCcccCeEECCCCCEEEEEECcCC------ceEEEEEECCCCCEEEecCC------
Confidence 6888887644 2122211 11222223332 5555555553321 24699999999887665432
Q ss_pred CCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCCC
Q 004198 313 SKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENSP 362 (769)
Q Consensus 313 ~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~~ 362 (769)
......++.-+++.+++++.++. ...+|.+|+..
T Consensus 354 --------------~~~~~~~~spdg~~l~~~s~~~~--~~~l~~~d~~g 387 (415)
T 2hqs_A 354 --------------FLDETPSLAPNGTMVIYSSSQGM--GSVLNLVSTDG 387 (415)
T ss_dssp --------------SSCEEEEECTTSSEEEEEEEETT--EEEEEEEETTS
T ss_pred --------------CCcCCeEEcCCCCEEEEEEcCCC--ccEEEEEECCC
Confidence 11112222334566666665442 23577777654
No 72
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.18 E-value=4.4 Score=41.35 Aligned_cols=185 Identities=11% Similarity=0.038 Sum_probs=91.2
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEE-E-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA-V-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~-~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
.+.+.+||+.+++.......+.. + ..++. - ++.+|+.+.. .+.++++|+.+....-..+.. +..|
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~~~--~---~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~-~~~~- 85 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLGYD--F---VDTAITSDCSNVVVTSDF------CQTLVQIETQLEPPKVVAIQE-GQSS- 85 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECCCC--E---EEEEECSSSCEEEEEEST------TCEEEEEECSSSSCEEEEEEE-CSSC-
T ss_pred CCeEEEEeCcccceeeeEEccCC--c---ceEEEcCCCCEEEEEeCC------CCeEEEEECCCCceeEEeccc-CCCC-
Confidence 36899999999988765443211 1 12222 2 3467776652 237999999885421222221 2222
Q ss_pred CccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCE-EEEEcccCCCC
Q 004198 152 PRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGM-FLLCGGRDASG 229 (769)
Q Consensus 152 ~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~-l~v~GG~~~~~ 229 (769)
.+.+++. +++.+| .+...+ ....++++|+.+. +.......+ ...+......++. +|+.+...
T Consensus 86 ---~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~--~~~~~~~~~-----~~~~~~~~spdg~~l~~~~~~~--- 149 (331)
T 3u4y_A 86 ---MADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKN--KFISTIPIP-----YDAVGIAISPNGNGLILIDRSS--- 149 (331)
T ss_dssp ---CCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTT--EEEEEEECC-----TTEEEEEECTTSSCEEEEEETT---
T ss_pred ---ccceEECCCCCEEE-EecCCC--CcccEEEEECCCC--CeEEEEECC-----CCccceEECCCCCEEEEEecCC---
Confidence 1213233 344566 332221 1137999999887 433322221 1225555667774 66654421
Q ss_pred Ccccc-eEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CC-EEEEEecccCCCCcccCCCcEEEEECCCCcE
Q 004198 230 APLAD-AYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GA-RLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300 (769)
Q Consensus 230 ~~l~d-~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~-~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W 300 (769)
+. ++.|+...++...... ....+....-+.+++. ++ .+|+.+.. .+.+.+||+.+.+.
T Consensus 150 ---~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~---------~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 150 ---ANTVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANLI---------GNSIGILETQNPEN 210 (331)
T ss_dssp ---TTEEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEETT---------TTEEEEEECSSTTS
T ss_pred ---CceEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEEEEEeCC---------CCeEEEEECCCCcc
Confidence 23 4555554433322111 0000111112334443 34 57776532 24589999987764
No 73
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=94.04 E-value=0.048 Score=56.64 Aligned_cols=71 Identities=17% Similarity=0.079 Sum_probs=38.7
Q ss_pred CEEEEccCCCCH---------HHHHHHHHH-hCCCCCCCCCcceeEEEeccccCC-CC---ChHHHHHHHHHhhh--cC-
Q 004198 582 PVKVFGDLHGQF---------GDLMRLFDE-YGFPSTAGDITYIDYLFLGDYVDR-GQ---HSLETITLLLALKI--EY- 644 (769)
Q Consensus 582 ~i~viGDiHG~~---------~~l~~~l~~-~~~~~~~~~~~~~~~vfLGD~vDr-G~---~s~e~l~ll~~lk~--~~- 644 (769)
.+.++||+|... .++.+.+.. +.....+ -+|++||+++. |. ...+....+..+.. ..
T Consensus 8 ~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d------~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 81 (313)
T 1ute_A 8 RFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGAD------FILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLR 81 (313)
T ss_dssp EEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCS------EEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGT
T ss_pred EEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCC------EEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhc
Confidence 389999999863 244444332 1111111 57889999753 21 11233333322110 12
Q ss_pred CCceEEecCCcchh
Q 004198 645 PENVHLIRGNHEAA 658 (769)
Q Consensus 645 p~~v~llrGNHE~~ 658 (769)
+-.++++.||||..
T Consensus 82 ~~p~~~v~GNHD~~ 95 (313)
T 1ute_A 82 NVPWHVLAGNHDHL 95 (313)
T ss_dssp TCCEEECCCHHHHH
T ss_pred CCCEEEECCCCccC
Confidence 35799999999974
No 74
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=93.96 E-value=0.073 Score=58.49 Aligned_cols=70 Identities=20% Similarity=0.203 Sum_probs=41.4
Q ss_pred EEEEccCCCCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCC------h-HHHHHHHHHhhhcCCCceEEecCCc
Q 004198 583 VKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQH------S-LETITLLLALKIEYPENVHLIRGNH 655 (769)
Q Consensus 583 i~viGDiHG~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~------s-~e~l~ll~~lk~~~p~~v~llrGNH 655 (769)
+.++||+|...... ++++.+.......+ -+|++||+++.+.. . -+...++..+... -.++.+.|||
T Consensus 122 f~~igD~~~~~~~~-~~l~~~~~~~~~~D----~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~--~P~~~v~GNH 194 (424)
T 2qfp_A 122 FGLIGDLGQSFDSN-TTLSHYELSPKKGQ----TVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAY--QPWIWTAGNH 194 (424)
T ss_dssp EEEECSCTTBHHHH-HHHHHHHTCSSCCC----EEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTT--SCEEECCCHH
T ss_pred EEEEEeCCCCCChH-HHHHHHHhCCCCCC----EEEEcCccccccccccccchHHHHHHHHHHHHHhc--CCeEeecCCc
Confidence 88999999887544 23444322110111 57889999986421 1 1223344444333 3589999999
Q ss_pred chhh
Q 004198 656 EAAD 659 (769)
Q Consensus 656 E~~~ 659 (769)
|...
T Consensus 195 D~~~ 198 (424)
T 2qfp_A 195 EIEF 198 (424)
T ss_dssp HHCC
T ss_pred cccc
Confidence 9753
No 75
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=93.93 E-value=1.4 Score=44.13 Aligned_cols=141 Identities=18% Similarity=0.146 Sum_probs=88.3
Q ss_pred CcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEec
Q 004198 12 SYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIR 91 (769)
Q Consensus 12 ~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~ 91 (769)
.+|+.+++-...-++|..-+|..++.. +++||+.... .+.+++||+.+.+-..--
T Consensus 47 ~vD~~tgkv~~~~~l~~~~fgeGi~~~------~~~ly~ltw~-------------------~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 47 KVDLETGRILQRAEVPPPYFGAGIVAW------RDRLIQLTWR-------------------NHEGFVYDLATLTPRARF 101 (243)
T ss_dssp EEETTTCCEEEEEECCTTCCEEEEEEE------TTEEEEEESS-------------------SSEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCcceeEEEEe------CCEEEEEEee-------------------CCEEEEEECCcCcEEEEE
Confidence 356666666666567777889999998 8899998542 478999999987644322
Q ss_pred CCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc-cccEEEEECCcEEEEEe
Q 004198 92 PAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR-YGHVMDLVSQRYLVSVS 170 (769)
Q Consensus 92 ~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R-~~hs~~~~~~~~l~v~G 170 (769)
+ .+..+.+++.-++.+|+.-| .+.++.+|+.+.+ .-.++.+ +..+.+. .---+...+ +.+|+--
T Consensus 102 ~-----~~~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~-~~~~I~V-~~~g~~~~~lNeLe~~~-G~lyanv 166 (243)
T 3mbr_X 102 R-----YPGEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQ-QVGSIKV-TAGGRPLDNLNELEWVN-GELLANV 166 (243)
T ss_dssp E-----CSSCCCEEEECSSCEEEECS-------SSEEEEECTTTCC-EEEEEEC-EETTEECCCEEEEEEET-TEEEEEE
T ss_pred e-----CCCCceEEeeCCCEEEEECC-------CCeEEEEeCCCCe-EEEEEEE-ccCCcccccceeeEEeC-CEEEEEE
Confidence 1 22356777777788998654 3569999999832 2344433 2222221 112333344 4777532
Q ss_pred cCCCCCccCceeEEeCCCCCc-eEEEcC
Q 004198 171 GNDGKRVLSDAWALDTAQKPY-VWQRLN 197 (769)
Q Consensus 171 G~~~~~~~~dv~~~d~~~~~~-~W~~v~ 197 (769)
- ..+++.+.|+++... .|-.+.
T Consensus 167 w-----~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 167 W-----LTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp T-----TTTEEEEECTTTCBEEEEEECG
T ss_pred C-----CCCeEEEEECCCCCEEEEEECC
Confidence 1 246899999988732 354443
No 76
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.58 E-value=4.9 Score=42.15 Aligned_cols=177 Identities=16% Similarity=0.189 Sum_probs=91.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++++|+.+++-...-..+. .-.+++.. ++.||+.|+. ...+.++|+.+.. .......+ .
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~------d~~i~v~d~~~~~--~~~~~~~~---~- 74 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVGS-----NPMGAVISPDGTKVYVANAH------SNDVSIIDTATNN--VIATVPAG---S- 74 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEEGG------GTEEEEEETTTTE--EEEEEECS---S-
T ss_pred CEEEEEECCCCeEEEEeecCC-----CcceEEECCCCCEEEEECCC------CCeEEEEECCCCe--EEEEEECC---C-
Confidence 579999999887554322211 11233332 3477777754 2469999998843 33332111 1
Q ss_pred ccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEcccCCCCC
Q 004198 153 RYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGGRDASGA 230 (769)
Q Consensus 153 R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG~~~~~~ 230 (769)
.-..++.. .++.+++.|..+ +.+++||+.++ +........ ....+.....++ .+|+.++.+
T Consensus 75 -~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~--~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~---- 137 (391)
T 1l0q_A 75 -SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSN--TVAGTVKTG-----KSPLGLALSPDGKKLYVTNNGD---- 137 (391)
T ss_dssp -SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECS-----SSEEEEEECTTSSEEEEEETTT----
T ss_pred -CccceEECCCCCEEEEEECCC-----CEEEEEECCCC--eEEEEEeCC-----CCcceEEECCCCCEEEEEeCCC----
Confidence 22233333 344566665433 45899999887 332221111 112334444555 465665432
Q ss_pred cccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 231 PLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 231 ~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
+.++.++..+. +..+....+. .-..+++. +..+|+.++. ...+.+||+.+.+...
T Consensus 138 --~~v~~~d~~~~-~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 138 --KTVSVINTVTK-AVINTVSVGR-----SPKGIAVTPDGTKVYVANFD---------SMSISVIDTVTNSVID 194 (391)
T ss_dssp --TEEEEEETTTT-EEEEEEECCS-----SEEEEEECTTSSEEEEEETT---------TTEEEEEETTTTEEEE
T ss_pred --CEEEEEECCCC-cEEEEEecCC-----CcceEEECCCCCEEEEEeCC---------CCEEEEEECCCCeEEE
Confidence 35777777643 2222222121 11333343 4467676552 2458999998875443
No 77
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.52 E-value=2.6 Score=45.60 Aligned_cols=190 Identities=11% Similarity=0.124 Sum_probs=100.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE---CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV---GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~---~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
..++.+|+.+++...+.... . . ..+..+ +..|++.+..+ ....+|++|+.+. +..++. ..+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~---~--~-~~~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~--~~~~l~---~~~- 266 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP---R--H-NGAPAFSPDGSKLAFALSKT----GSLNLYVMDLASG--QIRQVT---DGR- 266 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS---S--C-EEEEEECTTSSEEEEEECTT----SSCEEEEEETTTC--CEEECC---CCS-
T ss_pred cEEEEEECCCCcEEEeecCC---C--c-ccCEEEcCCCCEEEEEEecC----CCceEEEEECCCC--CEEeCc---CCC-
Confidence 57999999999887765431 1 1 112222 34566554431 1346999999883 455542 111
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCc
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP 231 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~ 231 (769)
..-.......++..+++++.... ...+|.+|+.+. +-..+... .....+.....++..+++++....
T Consensus 267 -~~~~~~~~spdg~~l~~~s~~~g--~~~i~~~d~~~~--~~~~l~~~-----~~~~~~~~~spdG~~l~~~~~~~g--- 333 (415)
T 2hqs_A 267 -SNNTEPTWFPDSQNLAFTSDQAG--RPQVYKVNINGG--APQRITWE-----GSQNQDADVSSDGKFMVMVSSNGG--- 333 (415)
T ss_dssp -SCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTSS--CCEECCCS-----SSEEEEEEECTTSSEEEEEEECSS---
T ss_pred -CcccceEECCCCCEEEEEECCCC--CcEEEEEECCCC--CEEEEecC-----CCcccCeEECCCCCEEEEEECcCC---
Confidence 11122323333344444443221 246899999876 33333221 122223444577776666654321
Q ss_pred ccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCC
Q 004198 232 LADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (769)
Q Consensus 232 l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 306 (769)
...++.++..+. +...+... . .-.+.++. +++.+++++...+ ...++++|+.+...+.+...
T Consensus 334 ~~~i~~~d~~~~---~~~~l~~~---~-~~~~~~~spdg~~l~~~s~~~~------~~~l~~~d~~g~~~~~l~~~ 396 (415)
T 2hqs_A 334 QQHIAKQDLATG---GVQVLSST---F-LDETPSLAPNGTMVIYSSSQGM------GSVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp CEEEEEEETTTC---CEEECCCS---S-SCEEEEECTTSSEEEEEEEETT------EEEEEEEETTSCCEEECCCS
T ss_pred ceEEEEEECCCC---CEEEecCC---C-CcCCeEEcCCCCEEEEEEcCCC------ccEEEEEECCCCcEEEeeCC
Confidence 356788888754 33333322 1 22233333 6666677664321 23699999988877776543
No 78
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.43 E-value=13 Score=42.14 Aligned_cols=121 Identities=15% Similarity=0.179 Sum_probs=67.5
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcc-cccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCC---
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSP-RAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQ--- 148 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~-R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~--- 148 (769)
..++++|..+++ |+.-... .+.. ....+-+..++.||+..+.... .....++.||..+.+..|+.-.....
T Consensus 125 g~l~alD~~tG~~~W~~~~~~--~~~~~~~~~~P~v~~g~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~~~~~~~~~~ 201 (571)
T 2ad6_A 125 GHLLALDAKTGKINWEVEVCD--PKVGSTLTQAPFVAKDTVLMGCSGAEL-GVRGAVNAFDLKTGELKWRAFATGSDDSV 201 (571)
T ss_dssp SEEEEEETTTCCEEEEEECCC--GGGTCBCCSCCEEETTEEEEECBCGGG-TCCCEEEEEETTTCCEEEEEESSSCHHHH
T ss_pred CEEEEEECCCCCEEEEecCCC--CCccceeccCCEEECCEEEEEecCCcc-CCCCEEEEEECCCCcEEEEEccCCCcccc
Confidence 579999998875 8854321 1110 1122334568888886542111 12356999999998788976532110
Q ss_pred --CCCC--------------------cc---c----cEEEEE-CCcEEEEEecCC----------CCCccCceeEEeCCC
Q 004198 149 --GPGP--------------------RY---G----HVMDLV-SQRYLVSVSGND----------GKRVLSDAWALDTAQ 188 (769)
Q Consensus 149 --~p~~--------------------R~---~----hs~~~~-~~~~l~v~GG~~----------~~~~~~dv~~~d~~~ 188 (769)
.|.. .+ + ..+++. ..+.+|+..|+. +..+.+.++++|+++
T Consensus 202 ~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~t 281 (571)
T 2ad6_A 202 RLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDT 281 (571)
T ss_dssp TBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTT
T ss_pred ccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCC
Confidence 0100 00 0 112222 334777765542 122345799999999
Q ss_pred CCceEEEcCC
Q 004198 189 KPYVWQRLNP 198 (769)
Q Consensus 189 ~~~~W~~v~~ 198 (769)
....|+.-..
T Consensus 282 G~~~W~~~~~ 291 (571)
T 2ad6_A 282 GMAKWGYQKT 291 (571)
T ss_dssp CCEEEEEESS
T ss_pred CcEEEEecCC
Confidence 9889987543
No 79
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=93.15 E-value=16 Score=42.35 Aligned_cols=122 Identities=21% Similarity=0.290 Sum_probs=68.9
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCC--C
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQG--P 150 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~--p 150 (769)
+.++.+|..+++ |+.-.............+-+..++.||+..+... ......++.||..+.+..|..-...... +
T Consensus 138 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~-~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~ 216 (677)
T 1kb0_A 138 GRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAE-YGVRGYITAYDAETGERKWRWFSVPGDPSKP 216 (677)
T ss_dssp SEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEESSCCCTTSC
T ss_pred CEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccc-cCCCCEEEEEECCCCcEEEEeccCCCCcccc
Confidence 579999998876 8865321101111122234456788887654322 1134679999999988889875321111 0
Q ss_pred ----------------CCcc---c-----cEEEEE-CCcEEEEEecCC-------------CCCccCceeEEeCCCCCce
Q 004198 151 ----------------GPRY---G-----HVMDLV-SQRYLVSVSGND-------------GKRVLSDAWALDTAQKPYV 192 (769)
Q Consensus 151 ----------------~~R~---~-----hs~~~~-~~~~l~v~GG~~-------------~~~~~~dv~~~d~~~~~~~ 192 (769)
...+ + ..+++. ..+.+|+..++. ...+...++.+|.++....
T Consensus 217 ~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~ 296 (677)
T 1kb0_A 217 FEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYK 296 (677)
T ss_dssp CSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEE
T ss_pred ccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEE
Confidence 0000 0 122222 345777655432 1224567999999999889
Q ss_pred EEEcC
Q 004198 193 WQRLN 197 (769)
Q Consensus 193 W~~v~ 197 (769)
|..-.
T Consensus 297 W~~~~ 301 (677)
T 1kb0_A 297 WHYQE 301 (677)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 98653
No 80
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=93.12 E-value=8.7 Score=39.30 Aligned_cols=190 Identities=14% Similarity=0.069 Sum_probs=95.1
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
.+.++++|+.+.+....-..+.. .++++.. ++.+|+.++. .+.++++|+.+.+..+ .+.. +....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~-~~~~-~~~~~ 134 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLK-----PFGATINNTTQTLWFGNTV------NSAVTAIDAKTGEVKG-RLVL-DDRKR 134 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC-----CCSEEEETTTTEEEEEETT------TTEEEEEETTTCCEEE-EEES-CCCCC
T ss_pred CccEEEEcCCCCeEEEEEecCCC-----cceEEECCCCCEEEEEecC------CCEEEEEeCCCCeeEE-EEec-CCCcc
Confidence 46799999998875443322211 2333333 3468887653 2469999998854323 2322 11111
Q ss_pred -----CccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEcc
Q 004198 152 -----PRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGG 224 (769)
Q Consensus 152 -----~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG 224 (769)
+..-+.+++. .++.+|+.+... -..++++|+.+....+.. ...+.. -+......++ .+|+...
T Consensus 135 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~-~~~~~~-----~~~~~~s~dg~~l~~~~~ 204 (353)
T 3vgz_A 135 TEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAI-QNTGKM-----STGLALDSEGKRLYTTNA 204 (353)
T ss_dssp CSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEE-CCCCTT-----CCCCEEETTTTEEEEECT
T ss_pred ccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEe-cCCCCc-----cceEEECCCCCEEEEEcC
Confidence 1112334343 345677765322 245999999887333222 211111 1233334454 5666532
Q ss_pred cCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 225 RDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 225 ~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
-+.++.+|..+. .-.+....+.........++++. ++.+|+.... .+.+++||+.+.+...
T Consensus 205 -------~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 205 -------DGELITIDTADN-KILSRKKLLDDGKEHFFINISLDTARQRAFITDSK---------AAEVLVVDTRNGNILA 267 (353)
T ss_dssp -------TSEEEEEETTTT-EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS---------SSEEEEEETTTCCEEE
T ss_pred -------CCeEEEEECCCC-eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC---------CCEEEEEECCCCcEEE
Confidence 246777887644 22222222111111222234443 5567766431 3569999998876544
Q ss_pred c
Q 004198 303 R 303 (769)
Q Consensus 303 ~ 303 (769)
.
T Consensus 268 ~ 268 (353)
T 3vgz_A 268 K 268 (353)
T ss_dssp E
T ss_pred E
Confidence 3
No 81
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=93.12 E-value=0.1 Score=57.44 Aligned_cols=69 Identities=16% Similarity=0.152 Sum_probs=39.4
Q ss_pred EEEEccCCCCHHHHHHHHHHhC-CCCCCCCCcceeEEEeccccCCCCC-----h-HH-HHHHHHHhhhcCCCceEEecCC
Q 004198 583 VKVFGDLHGQFGDLMRLFDEYG-FPSTAGDITYIDYLFLGDYVDRGQH-----S-LE-TITLLLALKIEYPENVHLIRGN 654 (769)
Q Consensus 583 i~viGDiHG~~~~l~~~l~~~~-~~~~~~~~~~~~~vfLGD~vDrG~~-----s-~e-~l~ll~~lk~~~p~~v~llrGN 654 (769)
+.++||+|..... .+.++.+. .+..- + -+|++||+++.+.. . .+ ...++..+.... .++.+.||
T Consensus 129 f~~~gD~~~~~~~-~~~l~~i~~~~~~~-D----~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~--P~~~v~GN 200 (426)
T 1xzw_A 129 FGLIGDIGQTHDS-NTTLTHYEQNSAKG-Q----AVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQ--PWIWTAGN 200 (426)
T ss_dssp EEEECSCTTBHHH-HHHHHHHHHCTTCC-S----EEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEECCCCG
T ss_pred EEEEEeCCCCCch-HHHHHHHHhCCCCC-C----EEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcC--CEEEeccc
Confidence 8899999987532 22333322 11111 1 57889999975321 1 11 233444443333 58999999
Q ss_pred cchhh
Q 004198 655 HEAAD 659 (769)
Q Consensus 655 HE~~~ 659 (769)
||...
T Consensus 201 HD~~~ 205 (426)
T 1xzw_A 201 HEIDY 205 (426)
T ss_dssp GGCCC
T ss_pred ccccc
Confidence 99764
No 82
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=93.07 E-value=8.8 Score=39.24 Aligned_cols=187 Identities=16% Similarity=0.110 Sum_probs=91.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCc-----ccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPS-----PRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG 147 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~-----~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g 147 (769)
+.++++|+.+++-...-..+.... +..-++++.. ++.+|+.+... ...++++|+.+.+.. ..+...+
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~-~~~~~~~ 184 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLK-TAIQNTG 184 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEE-EEECCCC
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceE-EEecCCC
Confidence 579999999887432222211111 1112333332 45788776321 245999999884322 2221111
Q ss_pred CCCCCccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEccc
Q 004198 148 QGPGPRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGGR 225 (769)
Q Consensus 148 ~~p~~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG~ 225 (769)
. .-+.++.. +++.+|+... -+.++++|+.+....+.... ....+ ...........++ .+|+.+..
T Consensus 185 ~-----~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~-~~~~~-~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 185 K-----MSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSRKKL-LDDGK-EHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp T-----TCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEEEEC-CCSSS-CCCEEEEEEETTTTEEEEEESS
T ss_pred C-----ccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEc-CCCCC-CcccceEEECCCCCEEEEEeCC
Confidence 1 11223333 4446666543 24688999988743333222 11111 1112223344454 56665421
Q ss_pred CCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 226 DASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 226 ~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
.+.++.+|..+...-..... + .+ ...++. ++.+|+.+.. .+.+.+||+.+.+...
T Consensus 252 ------~~~v~~~d~~~~~~~~~~~~-~---~~---~~~~~s~dg~~l~v~~~~---------~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 252 ------AAEVLVVDTRNGNILAKVAA-P---ES---LAVLFNPARNEAYVTHRQ---------AGKVSVIDAKSYKVVK 308 (353)
T ss_dssp ------SSEEEEEETTTCCEEEEEEC-S---SC---CCEEEETTTTEEEEEETT---------TTEEEEEETTTTEEEE
T ss_pred ------CCEEEEEECCCCcEEEEEEc-C---CC---ceEEECCCCCEEEEEECC---------CCeEEEEECCCCeEEE
Confidence 25678888764422222222 1 11 223333 4567776542 2469999998876544
No 83
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=93.06 E-value=4.1 Score=41.32 Aligned_cols=179 Identities=15% Similarity=0.147 Sum_probs=87.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+..||+.+.+........ ..........+ ++..++.|+. ...+.+||+.+. +..... ... .
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~------dg~v~~~d~~~~--~~~~~~---~~~-~ 183 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELT---SSAPACYALAISPDSKVCFSCCS------DGNIAVWDLHNQ--TLVRQF---QGH-T 183 (337)
T ss_dssp SEEEEEECCCC--EEEEEEE---CSSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTT--EEEEEE---CCC-S
T ss_pred CcEEEEECCCCCcceeeecc---cCCCceEEEEECCCCCEEEEEeC------CCcEEEEeCCCC--ceeeee---ecc-c
Confidence 57889999888754433211 00111112222 3445555553 234899999883 333321 111 1
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
..-.++....++.+++.|+.++ .+.+||+.+. +-...... .....+.....++.+++.|+.+
T Consensus 184 ~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~--~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~~------ 245 (337)
T 1gxr_A 184 DGASCIDISNDGTKLWTGGLDN-----TVRSWDLREG--RQLQQHDF-----TSQIFSLGYCPTGEWLAVGMES------ 245 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTT--EEEEEEEC-----SSCEEEEEECTTSSEEEEEETT------
T ss_pred CceEEEEECCCCCEEEEEecCC-----cEEEEECCCC--ceEeeecC-----CCceEEEEECCCCCEEEEEcCC------
Confidence 1122333333445666666543 5888998876 22111111 1112334445677777777643
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
..+..++........ ... ....-.++++. ++.+++.|+. ...+.+||..+.+-.
T Consensus 246 ~~i~~~~~~~~~~~~---~~~---~~~~v~~~~~~~~~~~l~~~~~---------dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 246 SNVEVLHVNKPDKYQ---LHL---HESCVLSLKFAYCGKWFVSTGK---------DNLLNAWRTPYGASI 300 (337)
T ss_dssp SCEEEEETTSSCEEE---ECC---CSSCEEEEEECTTSSEEEEEET---------TSEEEEEETTTCCEE
T ss_pred CcEEEEECCCCCeEE---EcC---CccceeEEEECCCCCEEEEecC---------CCcEEEEECCCCeEE
Confidence 246667766542221 111 11111223333 5666777763 235899998877644
No 84
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=92.83 E-value=3.3 Score=44.21 Aligned_cols=192 Identities=7% Similarity=-0.076 Sum_probs=93.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 76 SVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 76 dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
.+|.+|+.+.+++.+.... ......+++.. ++.+++.++.+ ..++++|+.+. +.......+.......
T Consensus 102 ~l~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g--~~~~~~~~~~~~~~~~ 170 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFK---TGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINSG--QTVRLSPPEKYKKKLG 170 (433)
T ss_dssp CEEECCBTTCSEEEEEEEE---CSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTTC--CEEEECCCHHHHTTCC
T ss_pred EEEEECCCCCcceEEEEEc---CCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCCC--eEeeecCcccccccCC
Confidence 7899999877666554321 11111222222 67888877642 34999999884 3443311001111111
Q ss_pred c-cEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEcccCCCCCcc
Q 004198 155 G-HVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGGRDASGAPL 232 (769)
Q Consensus 155 ~-hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG~~~~~~~l 232 (769)
. .+++...++.+++.|+.+ ..+.+||+.+....+... .. ...-.+.....++ .+|+.++.+
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~l~~~~~~~------ 233 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVD-LT-----GKWSKILLYDPIRDLVYCSNWIS------ 233 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEE-CS-----SSSEEEEEEETTTTEEEEEETTT------
T ss_pred ceeEEEEcCCCEEEEEECCC-----CEEEEEECCCceEEEEEc-CC-----CCCeeEEEEcCCCCEEEEEecCC------
Confidence 1 123233455777777644 358899988763333222 11 1111233334444 566665432
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
..++.+|..+. ...+... . ...-+++++. +++.+++++...+.. ......+.+||+.+.+-..
T Consensus 234 ~~i~~~d~~~~-~~~~~~~-~----~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~dg~i~~~d~~~~~~~~ 297 (433)
T 3bws_A 234 EDISVIDRKTK-LEIRKTD-K----IGLPRGLLLSKDGKELYIAQFSASNQ-ESGGGRLGIYSMDKEKLID 297 (433)
T ss_dssp TEEEEEETTTT-EEEEECC-C----CSEEEEEEECTTSSEEEEEEEESCTT-CSCCEEEEEEETTTTEEEE
T ss_pred CcEEEEECCCC-cEEEEec-C----CCCceEEEEcCCCCEEEEEECCCCcc-ccCCCeEEEEECCCCcEEe
Confidence 35777887643 2222211 1 1112333333 454444444322111 1123579999998775443
No 85
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=92.48 E-value=2.6 Score=43.20 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=39.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAG 122 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~ 122 (769)
++++|+.++. .+.++++|+.+++....-..+. ....+.++.. ++.+|+.+..
T Consensus 10 ~~~~~v~~~~-------------------~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~~~s~dg~~~~v~~~~---- 63 (349)
T 1jmx_B 10 GHEYMIVTNY-------------------PNNLHVVDVASDTVYKSCVMPD---KFGPGTAMMAPDNRTAYVLNNH---- 63 (349)
T ss_dssp TCEEEEEEET-------------------TTEEEEEETTTTEEEEEEECSS---CCSSCEEEECTTSSEEEEEETT----
T ss_pred CCEEEEEeCC-------------------CCeEEEEECCCCcEEEEEecCC---CCCCceeEECCCCCEEEEEeCC----
Confidence 6678887763 3579999999887654332221 0012333332 3467777632
Q ss_pred CCcCcEEEEEccCCc
Q 004198 123 HSTDDLYVLDLTNDK 137 (769)
Q Consensus 123 ~~~~dl~~~d~~t~~ 137 (769)
...++++|+.+.+
T Consensus 64 --~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 64 --YGDIYGIDLDTCK 76 (349)
T ss_dssp --TTEEEEEETTTTE
T ss_pred --CCcEEEEeCCCCc
Confidence 2569999998843
No 86
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.46 E-value=8.3 Score=39.72 Aligned_cols=97 Identities=9% Similarity=0.158 Sum_probs=49.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--C--CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--G--TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~--~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
+.+.+||+....+..+.... .....-.++.. . +.+++.|+.+ ..+.+||+.+ .+|..+......
T Consensus 33 g~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~--~~~~~~~~~~~~- 100 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEEN--GRWSQIAVHAVH- 100 (379)
T ss_dssp SCEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEET--TEEEEEEEECCC-
T ss_pred CcEEEEecCCCcceeeeEec---CCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCC--CceeEeeeecCC-
Confidence 46888888877776554321 01111122222 1 4555555542 3489999988 556655431111
Q ss_pred CCccccEEEEECC--cEEEEEecCCCCCccCceeEEeCCCC
Q 004198 151 GPRYGHVMDLVSQ--RYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 151 ~~R~~hs~~~~~~--~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
...-.++....+ +.+++.|+.++ .+.+||+.+.
T Consensus 101 -~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~ 135 (379)
T 3jrp_A 101 -SASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 135 (379)
T ss_dssp -SSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTT
T ss_pred -CcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCC
Confidence 111122222232 35666676554 4777777654
No 87
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=92.42 E-value=12 Score=39.08 Aligned_cols=177 Identities=18% Similarity=0.122 Sum_probs=88.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++++|+.+++....-..+. .-.+++.. ++.||+.|.. ...+++||+.+. +.......+
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~~-----~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~--~~~~~~~~~----- 115 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAGS-----SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSN--TVAGTVKTG----- 115 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEETT------TTEEEEEETTTT--EEEEEEECS-----
T ss_pred CeEEEEECCCCeEEEEEECCC-----CccceEECCCCCEEEEEECC------CCEEEEEECCCC--eEEEEEeCC-----
Confidence 579999999887654433221 11222222 3467776542 245999999984 333332111
Q ss_pred ccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEcccCCCCC
Q 004198 153 RYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGGRDASGA 230 (769)
Q Consensus 153 R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG~~~~~~ 230 (769)
..-..++.. .++.+|+.++.+ +.++++|+.+. +....-..+. .-.......++ .+|+.++.+
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~--~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~~---- 179 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTK--AVINTVSVGR-----SPKGIAVTPDGTKVYVANFDS---- 179 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECCS-----SEEEEEECTTSSEEEEEETTT----
T ss_pred CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCC--cEEEEEecCC-----CcceEEECCCCCEEEEEeCCC----
Confidence 112333333 344676766543 36899999887 4333222211 11333444555 566665432
Q ss_pred cccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CC-EEEEEecccCCCCcccCCCcEEEEECCCCcE
Q 004198 231 PLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GA-RLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300 (769)
Q Consensus 231 ~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~-~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W 300 (769)
+.++.+|..+. +....... ...-.++++. ++ .+++.+. .. ....+.+||+.+.+-
T Consensus 180 --~~v~~~d~~~~---~~~~~~~~---~~~~~~~~~~~~g~~l~~~~~-~~------~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 180 --MSISVIDTVTN---SVIDTVKV---EAAPSGIAVNPEGTKAYVTNV-DK------YFNTVSMIDTGTNKI 236 (391)
T ss_dssp --TEEEEEETTTT---EEEEEEEC---SSEEEEEEECTTSSEEEEEEE-CS------SCCEEEEEETTTTEE
T ss_pred --CEEEEEECCCC---eEEEEEec---CCCccceEECCCCCEEEEEec-Cc------CCCcEEEEECCCCeE
Confidence 34777777644 22111111 1111233333 34 4544432 11 134699999987753
No 88
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=92.33 E-value=11 Score=38.66 Aligned_cols=194 Identities=10% Similarity=0.032 Sum_probs=88.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+..||+.+.++........ . ...-.++.+ ++..++.|+. ...+.+||+.+....+..... ..+..
T Consensus 74 g~i~vwd~~~~~~~~~~~~~~--~-~~~v~~~~~~~~~~~l~~~~~------d~~v~i~d~~~~~~~~~~~~~--~~~~~ 142 (372)
T 1k8k_C 74 RNAYVWTLKGRTWKPTLVILR--I-NRAARCVRWAPNEKKFAVGSG------SRVISICYFEQENDWWVCKHI--KKPIR 142 (372)
T ss_dssp SCEEEEEEETTEEEEEEECCC--C-SSCEEEEEECTTSSEEEEEET------TSSEEEEEEETTTTEEEEEEE--CTTCC
T ss_pred CeEEEEECCCCeeeeeEEeec--C-CCceeEEEECCCCCEEEEEeC------CCEEEEEEecCCCcceeeeee--ecccC
Confidence 468889998888765532210 1 111122222 3445555553 234778887764322222211 11111
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCC-------ceE-------EEcCCCCCCCCcccccEEEEecCCE
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP-------YVW-------QRLNPEGDRPSARMYATASARSDGM 218 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~-------~~W-------~~v~~~~~~P~~r~~hsa~~~~~g~ 218 (769)
..-.++....+..+++.|+.++ .+.+||+.... ..| ..+.... .......+.....++.
T Consensus 143 ~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~ 215 (372)
T 1k8k_C 143 STVLSLDWHPNSVLLAAGSCDF-----KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS--SSCGWVHGVCFSANGS 215 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC--CCSSCEEEEEECSSSS
T ss_pred CCeeEEEEcCCCCEEEEEcCCC-----CEEEEEcccccccccccccccccccchhhheEecC--CCCCeEEEEEECCCCC
Confidence 2222333344446677777554 46777753110 000 0000000 0111122333446676
Q ss_pred EEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEE-eCCEEEEEecccCCCCcccCCCcEEEEECCC
Q 004198 219 FLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVF-VGARLHVTGGALRGGRAIEGEAAVAVLDTAA 297 (769)
Q Consensus 219 l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~-~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t 297 (769)
+++.|+.+ ..+..|+..+...-...... .... .++++ -++.+++.| .. ..+.+|+..+
T Consensus 216 ~l~~~~~d------~~i~i~d~~~~~~~~~~~~~----~~~v-~~~~~~~~~~~l~~~-~d---------~~i~i~~~~~ 274 (372)
T 1k8k_C 216 RVAWVSHD------STVCLADADKKMAVATLASE----TLPL-LAVTFITESSLVAAG-HD---------CFPVLFTYDS 274 (372)
T ss_dssp EEEEEETT------TEEEEEEGGGTTEEEEEECS----SCCE-EEEEEEETTEEEEEE-TT---------SSCEEEEEET
T ss_pred EEEEEeCC------CEEEEEECCCCceeEEEccC----CCCe-EEEEEecCCCEEEEE-eC---------CeEEEEEccC
Confidence 77777643 23556666533211111111 1111 22333 367766655 22 2367777777
Q ss_pred --CcEEeccCCc
Q 004198 298 --GVWLDRNGLV 307 (769)
Q Consensus 298 --~~W~~~~~~~ 307 (769)
++|..+....
T Consensus 275 ~~~~~~~~~~~~ 286 (372)
T 1k8k_C 275 AAGKLSFGGRLD 286 (372)
T ss_dssp TTTEEEECCCCC
T ss_pred cCceEEEeeccC
Confidence 8998876654
No 89
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=92.26 E-value=8.4 Score=38.96 Aligned_cols=155 Identities=10% Similarity=0.068 Sum_probs=85.6
Q ss_pred CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 110 TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 110 ~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
+.+++.|.. ...++++|.++.+..|+.-.. .....|.+.+..++.+++.+ -+.++.||+ +.
T Consensus 5 ~~~lv~~~~------~~~v~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G 65 (276)
T 3no2_A 5 QHLLVGGSG------WNKIAIINKDTKEIVWEYPLE-----KGWECNSVAATKAGEILFSY-------SKGAKMITR-DG 65 (276)
T ss_dssp CEEEEECTT------CSEEEEEETTTTEEEEEEECC-----TTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TS
T ss_pred CcEEEeeCC------CCEEEEEECCCCeEEEEeCCC-----ccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CC
Confidence 466666643 366999999887777876521 11123455566566777732 245999999 66
Q ss_pred CceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCC-CCCcccceEEEEeC
Q 004198 190 PYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGV-APSPRYQHAAVFVG 268 (769)
Q Consensus 190 ~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~-~P~~R~~hs~~~~~ 268 (769)
...|+.-... ....+++....+|.+++..... ...++.++..-...|++...... .+...........+
T Consensus 66 ~~~W~~~~~~-----~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 66 RELWNIAAPA-----GCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp CEEEEEECCT-----TCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT
T ss_pred CEEEEEcCCC-----CccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC
Confidence 6788765421 1223556666788777764321 13566777643334555433221 11111222233345
Q ss_pred CEEEEEecccCCCCcccCCCcEEEEECCCC-cEEe
Q 004198 269 ARLHVTGGALRGGRAIEGEAAVAVLDTAAG-VWLD 302 (769)
Q Consensus 269 ~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~-~W~~ 302 (769)
+.+++.... ...+.+||++.+ .|+.
T Consensus 136 G~~lv~~~~---------~~~v~~~d~~G~~~w~~ 161 (276)
T 3no2_A 136 GNYLVPLFA---------TSEVREIAPNGQLLNSV 161 (276)
T ss_dssp SCEEEEETT---------TTEEEEECTTSCEEEEE
T ss_pred CCEEEEecC---------CCEEEEECCCCCEEEEE
Confidence 666665431 345899999843 3554
No 90
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=92.10 E-value=12 Score=38.45 Aligned_cols=133 Identities=15% Similarity=0.199 Sum_probs=63.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+++||+.+.+|+.+....... ..-.+++.. ++..++.|+. ...+.+||+.+ .++...... .....
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~~~~~------dg~i~vwd~~~--~~~~~~~~~--~~~~~ 97 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHN--GQVTGVDWAPDSNRIVTCGT------DRNAYVWTLKG--RTWKPTLVI--LRINR 97 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCS--SCEEEEEEETTTTEEEEEET------TSCEEEEEEET--TEEEEEEEC--CCCSS
T ss_pred CEEEEEeCCCCcEEeeeeecCCC--CcccEEEEeCCCCEEEEEcC------CCeEEEEECCC--CeeeeeEEe--ecCCC
Confidence 57899999998776554331111 111122222 3445555553 23488999988 445544321 11112
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
.-.++....+..+++.|+.++ .+.+||+.+.. .|....... .+....-.+.....++.+++.|+.+
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~-~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSR-----VISICYFEQEN-DWWVCKHIK-KPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----SEEEEEEETTT-TEEEEEEEC-TTCCSCEEEEEECTTSSEEEEEETT
T ss_pred ceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCC-cceeeeeee-cccCCCeeEEEEcCCCCEEEEEcCC
Confidence 222333334445666676553 35555554442 232221110 0112222334445677777777654
No 91
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=91.91 E-value=2.7 Score=48.88 Aligned_cols=19 Identities=11% Similarity=0.069 Sum_probs=15.4
Q ss_pred CCcEEEEECCCCcEEEecC
Q 004198 74 TNSVHLYDVLTRKWTRIRP 92 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~ 92 (769)
...++.+|+.+++..++..
T Consensus 63 ~~~i~~~d~~~g~~~~~~~ 81 (741)
T 2ecf_A 63 QLDLWSYDIGSGQTRLLVD 81 (741)
T ss_dssp EEEEEEEETTTCCEEEEEC
T ss_pred ccEEEEEECCCCceeEccc
Confidence 3589999999999887754
No 92
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.67 E-value=4.6 Score=39.78 Aligned_cols=200 Identities=8% Similarity=-0.046 Sum_probs=95.3
Q ss_pred CcEEEEECCC-CcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLT-RKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~-~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.++++|+.+ .+...+.... ...........-++..+++++.... ....+|.++..+. +...+.. ...
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~--~~~~~~~----~~~- 130 (297)
T 2ojh_A 62 GLLYRLSLAGDPSPEKVDTGF--ATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGG--TPRLMTK----NLP- 130 (297)
T ss_dssp TEEEEEESSSCCSCEECCCTT--CCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCC--CCEECCS----SSS-
T ss_pred CeEEEEeCCCCCCceEecccc--ccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCC--ceEEeec----CCC-
Confidence 4799999999 8877665321 1111112222224444444442111 3467899998773 3334421 111
Q ss_pred cccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 154 YGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 154 ~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
...+... +++.+++.++.++. ..+|.++..+. ....+... . ..........++..+++++... ..
T Consensus 131 -~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~--~~~~~~~~----~-~~~~~~~~s~dg~~l~~~~~~~---~~ 196 (297)
T 2ojh_A 131 -SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSG--VETRLTHG----E-GRNDGPDYSPDGRWIYFNSSRT---GQ 196 (297)
T ss_dssp -EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTC--CEEECCCS----S-SCEEEEEECTTSSEEEEEECTT---SS
T ss_pred -ccceEECCCCCEEEEEECCCCc---eEEEEEECCCC--cceEcccC----C-CccccceECCCCCEEEEEecCC---CC
Confidence 2223233 34455545544432 36888888766 55555432 1 1112334446665544443211 13
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcc--cCCCcEEEEECCCCcEEeccC
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAI--EGEAAVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~--~~~~~v~~yd~~t~~W~~~~~ 305 (769)
..+|.++.... ........ .......++. +++.+++++........ .....++++|..+++...+..
T Consensus 197 ~~i~~~~~~~~---~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 197 MQIWRVRVDGS---SVERITDS---AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp CEEEEEETTSS---CEEECCCC---SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred ccEEEECCCCC---CcEEEecC---CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 56777775543 22333221 1111222222 55555555543221100 012469999999887766554
No 93
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.66 E-value=8.5 Score=37.76 Aligned_cols=190 Identities=14% Similarity=0.094 Sum_probs=91.9
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEE-ECCEEEEECccCCCCCCcCcEEEEEccC-CcceEEEeeecCCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTN-DKFKWHRVVVQGQGPG 151 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t-~~~~W~~~~~~g~~p~ 151 (769)
...++.+|+.+++...+.... ..-.+++. -++..+++++ ...++++|+.+ .. ...+. ..+.
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~-------~~~i~~~d~~~~~~--~~~~~---~~~~ 83 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP-----ELFEAPNWSPDGKYLLLNS-------EGLLYRLSLAGDPS--PEKVD---TGFA 83 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES-----SCCEEEEECTTSSEEEEEE-------TTEEEEEESSSCCS--CEECC---CTTC
T ss_pred ceeEEEEeCCCCceeeeccCC-----cceEeeEECCCCCEEEEEc-------CCeEEEEeCCCCCC--ceEec---cccc
Confidence 568999999998877664321 11112222 2344444443 13699999987 43 33332 1121
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEE-EcccCCCCC
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLL-CGGRDASGA 230 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v-~GG~~~~~~ 230 (769)
...-..+....++..+++++.... ....+|.++..+. ....+... . . ........++..++ .++.+.
T Consensus 84 ~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~--~~~~~~~~----~-~-~~~~~~spdg~~l~~~~~~~~--- 151 (297)
T 2ojh_A 84 TICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGG--TPRLMTKN----L-P-SYWHGWSPDGKSFTYCGIRDQ--- 151 (297)
T ss_dssp CCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCC--CCEECCSS----S-S-EEEEEECTTSSEEEEEEEETT---
T ss_pred cccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCC--ceEEeecC----C-C-ccceEECCCCCEEEEEECCCC---
Confidence 112222333334445555553322 3467899998776 43444322 1 1 22333445665444 444322
Q ss_pred cccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccC
Q 004198 231 PLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 231 ~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 305 (769)
...+|.++.... ........ .... ...+.. +++.+++++... ....+|.++..+.....+..
T Consensus 152 -~~~l~~~~~~~~---~~~~~~~~--~~~~-~~~~~s~dg~~l~~~~~~~------~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 152 -VFDIYSMDIDSG---VETRLTHG--EGRN-DGPDYSPDGRWIYFNSSRT------GQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp -EEEEEEEETTTC---CEEECCCS--SSCE-EEEEECTTSSEEEEEECTT------SSCEEEEEETTSSCEEECCC
T ss_pred -ceEEEEEECCCC---cceEcccC--CCcc-ccceECCCCCEEEEEecCC------CCccEEEECCCCCCcEEEec
Confidence 246777776543 22333221 1111 222232 454444443211 13468888887777666543
No 94
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=91.61 E-value=15 Score=38.69 Aligned_cols=214 Identities=12% Similarity=0.066 Sum_probs=100.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
+.+.+||+.+.+....-.. ....-.++..++.+++.|+. ...+.++|+.+....-..+. + ....
T Consensus 156 g~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~--~---~~~~ 219 (401)
T 4aez_A 156 GLVDIYDVESQTKLRTMAG-----HQARVGCLSWNRHVLSSGSR------SGAIHHHDVRIANHQIGTLQ--G---HSSE 219 (401)
T ss_dssp SCEEEEETTTCCEEEEECC-----CSSCEEEEEEETTEEEEEET------TSEEEEEETTSSSCEEEEEE--C---CSSC
T ss_pred CeEEEEECcCCeEEEEecC-----CCCceEEEEECCCEEEEEcC------CCCEEEEecccCcceeeEEc--C---CCCC
Confidence 4688889887764433211 11112223334455555553 24589999985322222221 1 1111
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec-CCEEEEEcccCCCCCccc
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-DGMFLLCGGRDASGAPLA 233 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~-~g~l~v~GG~~~~~~~l~ 233 (769)
-.++....++.+++.|+.++ .+.+||+.+........ .. ...-.+..... +..+++.||-..+ .
T Consensus 220 v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~-~~-----~~~v~~~~~~p~~~~ll~~~~gs~d----~ 284 (401)
T 4aez_A 220 VCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPKFTKT-NH-----NAAVKAVAWCPWQSNLLATGGGTMD----K 284 (401)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEEEEEC-CC-----SSCCCEEEECTTSTTEEEEECCTTT----C
T ss_pred eeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCccEEec-CC-----cceEEEEEECCCCCCEEEEecCCCC----C
Confidence 12333333456777777654 58889988763222221 11 11112333334 3356666542111 3
Q ss_pred ceEEEecCCCCceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCCccCCC
Q 004198 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGLVTSSR 311 (769)
Q Consensus 234 d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~ 311 (769)
.+..++..+......... . ..-.++++. +..+++.+|.. ...+.+||..+............
T Consensus 285 ~i~i~d~~~~~~~~~~~~-~-----~~v~~~~~s~~~~~l~~~~g~~--------dg~i~v~~~~~~~~~~~~~~~~h-- 348 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDA-G-----SQVTSLIWSPHSKEIMSTHGFP--------DNNLSIWSYSSSGLTKQVDIPAH-- 348 (401)
T ss_dssp EEEEEETTTCCEEEEEEC-S-----SCEEEEEECSSSSEEEEEECTT--------TCEEEEEEEETTEEEEEEEEECC--
T ss_pred EEEEEECCCCCEEEEEeC-C-----CcEEEEEECCCCCeEEEEeecC--------CCcEEEEecCCccceeEEEecCC--
Confidence 466666654321111111 1 011222222 34455554532 23588999888776665443221
Q ss_pred CCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCC
Q 004198 312 TSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGD 349 (769)
Q Consensus 312 ~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~ 349 (769)
..+..+.++.-++.+++.||.++.
T Consensus 349 --------------~~~v~~~~~s~dg~~l~s~~~dg~ 372 (401)
T 4aez_A 349 --------------DTRVLYSALSPDGRILSTAASDEN 372 (401)
T ss_dssp --------------SSCCCEEEECTTSSEEEEECTTSE
T ss_pred --------------CCCEEEEEECCCCCEEEEEeCCCc
Confidence 023333334445677788887764
No 95
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=91.48 E-value=11 Score=43.41 Aligned_cols=161 Identities=13% Similarity=0.030 Sum_probs=74.7
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPS 204 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~ 204 (769)
...++++|+.+. +-..+.. ......+-..+....++..++++..+.......++.+|+.+.. .+..+........
T Consensus 234 ~~~l~~~d~~~~--~~~~~~~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~-~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATG--KTVYLQT--GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR-FVRTLFVETDKHY 308 (706)
T ss_dssp EEEEEEEETTTT--EEEECCC--CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC-EEEEEEEEECSSC
T ss_pred eeEEEEEECCCC--ceEeecc--CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc-eeeEEEEccCCCe
Confidence 467999999883 3444421 1111122223333334444444444433345678999997751 2333321100000
Q ss_pred cccccEEEEec--CCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-C-CEEEEEecccCC
Q 004198 205 ARMYATASARS--DGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-G-ARLHVTGGALRG 280 (769)
Q Consensus 205 ~r~~hsa~~~~--~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~-~~i~V~GG~~~~ 280 (769)
........... ++.+++.+..++ ...+|.++.... ....+... ..... ...++- + +.|++.+.....
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~---~~~~l~~~-~~~v~-~~~~~spdg~~l~~~~~~~~~ 379 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGR---LIRQVTKG-EWEVT-NFAGFDPKGTRLYFESTEASP 379 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSC---EEEECCCS-SSCEE-EEEEECTTSSEEEEEESSSCT
T ss_pred ECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCC---EEEecCCC-CeEEE-eeeEEcCCCCEEEEEecCCCC
Confidence 00012233446 788666654432 356888875433 33333221 11111 112222 3 455555442211
Q ss_pred CCcccCCCcEEEEECCCCcEEecc
Q 004198 281 GRAIEGEAAVAVLDTAAGVWLDRN 304 (769)
Q Consensus 281 ~~~~~~~~~v~~yd~~t~~W~~~~ 304 (769)
. ...++.+|..+.+.+.+.
T Consensus 380 ~-----~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 380 L-----ERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp T-----CBEEEEEETTCCCCEESC
T ss_pred c-----eEEEEEEEcCCCCceecc
Confidence 1 246899999887766654
No 96
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=91.35 E-value=3.7 Score=41.62 Aligned_cols=167 Identities=8% Similarity=-0.003 Sum_probs=95.7
Q ss_pred CcccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE-Ee
Q 004198 12 SYRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT-RI 90 (769)
Q Consensus 12 ~y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~-~l 90 (769)
.+|+.+++-...-+++..-++..++.. +++||+.... .+.+++||+.+.+-. ++
T Consensus 69 ~vD~~Tgkv~~~~~l~~~~FgeGit~~------g~~ly~ltw~-------------------~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 69 KVDIESGKTLQQIELGKRYFGEGISDW------KDKIVGLTWK-------------------NGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp EECTTTCCEEEEEECCTTCCEEEEEEE------TTEEEEEESS-------------------SSEEEEEETTTCCEEEEE
T ss_pred EEECCCCcEEEEEecCCccceeEEEEe------CCEEEEEEee-------------------CCEEEEEECccCcEEEEE
Confidence 356666555554456666688888888 8899998552 468999999987744 33
Q ss_pred cCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC-CCCCCccccEEEEECCcEEEEE
Q 004198 91 RPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG-QGPGPRYGHVMDLVSQRYLVSV 169 (769)
Q Consensus 91 ~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g-~~p~~R~~hs~~~~~~~~l~v~ 169 (769)
+. +-.+.+++.-++.+|+.-| .+.++.+|+.+.+ .-.++.+.. ..|...-. -+...+ +.+|+-
T Consensus 124 ~~------~~eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~-v~~~I~V~~~g~~~~~lN-ELe~~~-G~lyan 187 (262)
T 3nol_A 124 NY------DGEGWGLTHNDQYLIMSDG-------TPVLRFLDPESLT-PVRTITVTAHGEELPELN-ELEWVD-GEIFAN 187 (262)
T ss_dssp EC------SSCCCCEEECSSCEEECCS-------SSEEEEECTTTCS-EEEEEECEETTEECCCEE-EEEEET-TEEEEE
T ss_pred EC------CCCceEEecCCCEEEEECC-------CCeEEEEcCCCCe-EEEEEEeccCCccccccc-eeEEEC-CEEEEE
Confidence 32 2255677777778888544 3669999999842 234443311 11111111 233344 477752
Q ss_pred ecCCCCCccCceeEEeCCCCCc-eEEEcCCCC-----CCCCcccccEEEEe-cCCEEEEEcc
Q 004198 170 SGNDGKRVLSDAWALDTAQKPY-VWQRLNPEG-----DRPSARMYATASAR-SDGMFLLCGG 224 (769)
Q Consensus 170 GG~~~~~~~~dv~~~d~~~~~~-~W~~v~~~~-----~~P~~r~~hsa~~~-~~g~l~v~GG 224 (769)
- ...+++.+.|+++... .|-.+...- ..+..-.-...+.. ..+.+||.|-
T Consensus 188 ~-----w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 188 V-----WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp E-----TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred E-----ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 2 1246899999988732 344443210 01111122222322 3568888873
No 97
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=91.03 E-value=19 Score=38.57 Aligned_cols=178 Identities=13% Similarity=0.093 Sum_probs=82.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
+.+..||+.+.+-...-.. ....-.++..++..++.|+. ...+.+||+.+.. -.... . ....
T Consensus 219 g~i~~wd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~------dg~i~iwd~~~~~--~~~~~---~--~~~~ 280 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMG-----HVAAVRCVQYDGRRVVSGAY------DFMVKVWDPETET--CLHTL---Q--GHTN 280 (445)
T ss_dssp SEEEEEESSSCCEEEEEEC-----CSSCEEEEEECSSCEEEEET------TSCEEEEEGGGTE--EEEEE---C--CCSS
T ss_pred CEEEEEECCCCcEEEEEcC-----CcccEEEEEECCCEEEEEcC------CCEEEEEECCCCc--EeEEe---c--CCCC
Confidence 4677788876653322111 01112233335555555553 2358899988732 22211 1 1111
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccc
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLAD 234 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d 234 (769)
......+.+ ..++.|+.++ .+.+||+.+....+.. ... .. .-.+... ++.+++.|+.++ .
T Consensus 281 ~v~~~~~~~-~~l~~~~~d~-----~i~i~d~~~~~~~~~~-~~~----~~--~v~~~~~-~~~~l~~~~~dg------~ 340 (445)
T 2ovr_B 281 RVYSLQFDG-IHVVSGSLDT-----SIRVWDVETGNCIHTL-TGH----QS--LTSGMEL-KDNILVSGNADS------T 340 (445)
T ss_dssp CEEEEEECS-SEEEEEETTS-----CEEEEETTTCCEEEEE-CCC----CS--CEEEEEE-ETTEEEEEETTS------C
T ss_pred ceEEEEECC-CEEEEEeCCC-----eEEEEECCCCCEEEEE-cCC----cc--cEEEEEE-eCCEEEEEeCCC------e
Confidence 122223344 4556666554 4788998776322221 111 11 1122222 344556666432 3
Q ss_pred eEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 235 AYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 235 ~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
+..++..+. .-..... +.. .....-.++..++.+++.|+.. ..+.+||..+++...
T Consensus 341 i~vwd~~~~-~~~~~~~-~~~-~~~~~v~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 341 VKIWDIKTG-QCLQTLQ-GPN-KHQSAVTCLQFNKNFVITSSDD---------GTVKLWDLKTGEFIR 396 (445)
T ss_dssp EEEEETTTC-CEEEEEC-STT-SCSSCEEEEEECSSEEEEEETT---------SEEEEEETTTCCEEE
T ss_pred EEEEECCCC-cEEEEEc-cCC-CCCCCEEEEEECCCEEEEEeCC---------CeEEEEECCCCceee
Confidence 556666433 1111111 110 0111123333466677777632 358999998876543
No 98
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=90.57 E-value=16 Score=36.87 Aligned_cols=179 Identities=12% Similarity=0.158 Sum_probs=85.2
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+..+|..+.+....-... ...-..+.. ++..++.|+. ...+.+||+.+.. -..... +. .
T Consensus 45 g~i~iw~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~s~~~------d~~i~vwd~~~~~--~~~~~~-~~---~ 107 (312)
T 4ery_A 45 KLIKIWGAYDGKFEKTISGH-----KLGISDVAWSSDSNLLVSASD------DKTLKIWDVSSGK--CLKTLK-GH---S 107 (312)
T ss_dssp SCEEEEETTTCCEEEEECCC-----SSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCC--EEEEEE-CC---S
T ss_pred CeEEEEeCCCcccchhhccC-----CCceEEEEEcCCCCEEEEECC------CCEEEEEECCCCc--EEEEEc-CC---C
Confidence 46788898888766543211 111112222 3455566653 2458899998743 222211 10 1
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
..-.++....+..+++.|+.++ .+.+||+.+.... ..+... .....+.....++.+++.|+.++
T Consensus 108 ~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~-~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~----- 171 (312)
T 4ery_A 108 NYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTGKCL-KTLPAH-----SDPVSAVHFNRDGSLIVSSSYDG----- 171 (312)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCEE-EEECCC-----SSCEEEEEECTTSSEEEEEETTS-----
T ss_pred CCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCEEE-EEecCC-----CCcEEEEEEcCCCCEEEEEeCCC-----
Confidence 1112232333445667777654 4788898776211 122111 11112233346777777777543
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcE
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W 300 (769)
.+..++..+. .......... .... ..+++. ++..++.|+. ...+.+||..+.+-
T Consensus 172 -~i~~wd~~~~-~~~~~~~~~~--~~~~-~~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 172 -LCRIWDTASG-QCLKTLIDDD--NPPV-SFVKFSPNGKYILAATL---------DNTLKLWDYSKGKC 226 (312)
T ss_dssp -CEEEEETTTC-CEEEEECCSS--CCCE-EEEEECTTSSEEEEEET---------TTEEEEEETTTTEE
T ss_pred -cEEEEECCCC-ceeeEEeccC--CCce-EEEEECCCCCEEEEEcC---------CCeEEEEECCCCcE
Confidence 3555665533 1111111111 1111 122222 5566666663 23588999987653
No 99
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=90.12 E-value=10 Score=39.06 Aligned_cols=197 Identities=9% Similarity=0.097 Sum_probs=93.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--C--CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--G--TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~--~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
+.+.+||+.+++|..+...... .....++.+ + +.+++.|+. ...+.+||+.+... .......+ ..
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~~-~~~~~~~~-~~ 147 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVH---SASVNSVQWAPHEYGPLLLVASS------DGKVSVVEFKENGT-TSPIIIDA-HA 147 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCC---SSCEEEEEECCGGGCSEEEEEET------TSEEEEEECCTTSC-CCEEEEEC-CT
T ss_pred CEEEEEEcCCCceeEeeeecCC---CcceEEEEeCCCCCCCEEEEecC------CCcEEEEecCCCCc-eeeEEecC-CC
Confidence 4688899999988766543111 111222222 2 445555553 24588888877421 11111101 01
Q ss_pred CCccccEEEEEC-------------CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecC-
Q 004198 151 GPRYGHVMDLVS-------------QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSD- 216 (769)
Q Consensus 151 ~~R~~hs~~~~~-------------~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~- 216 (769)
..-.++.... +..+++.|+.++ .+.+||+.+....|..+..... ....-.+.....+
T Consensus 148 --~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~--h~~~v~~~~~sp~~ 218 (379)
T 3jrp_A 148 --IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTV 218 (379)
T ss_dssp --TCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCC
T ss_pred --CceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEec--ccCcEeEEEECCCC
Confidence 1111222222 346777777665 4777777654334544432210 1111233444566
Q ss_pred --CEEEEEcccCCCCCcccceEEEecCCCC-ceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEE
Q 004198 217 --GMFLLCGGRDASGAPLADAYGLLMHRNG-QWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAV 292 (769)
Q Consensus 217 --g~l~v~GG~~~~~~~l~d~~~ld~~~~~-~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~ 292 (769)
+.+++.|+.++. +..|+..... .+........ .....-.++++. ++.+++.|+.. ..+.+
T Consensus 219 ~~~~~l~s~~~dg~------i~iwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~d---------g~i~i 282 (379)
T 3jrp_A 219 LLRSYLASVSQDRT------CIIWTQDNEQGPWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGD---------NKVTL 282 (379)
T ss_dssp SSSEEEEEEETTSC------EEEEEESSTTSCCEEEESSSS-CCSSCEEEEEECSSSCCEEEEESS---------SSEEE
T ss_pred CCCCeEEEEeCCCE------EEEEeCCCCCccceeeeeccc-cCCCcEEEEEEcCCCCEEEEecCC---------CcEEE
Confidence 788888876532 3444443221 1122222211 111111223332 66677777642 23777
Q ss_pred EECC-CCcEEeccCCc
Q 004198 293 LDTA-AGVWLDRNGLV 307 (769)
Q Consensus 293 yd~~-t~~W~~~~~~~ 307 (769)
|+.. ...|..+....
T Consensus 283 w~~~~~~~~~~~~~~~ 298 (379)
T 3jrp_A 283 WKENLEGKWEPAGEVH 298 (379)
T ss_dssp EEEEETTEEEEEEEEC
T ss_pred EeCCCCCcccccccee
Confidence 7776 46788776653
No 100
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=90.05 E-value=4.8 Score=47.30 Aligned_cols=96 Identities=9% Similarity=0.115 Sum_probs=51.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--C--CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--G--TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~--~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
+.+.+||..+.++..+.... .....-.++.. + +..++.|+. ...+.++|+.+ .+|..+....
T Consensus 31 g~I~vwd~~~~~~~~~~~l~---~h~~~V~~l~~s~~~~~~~l~s~s~------Dg~I~vwd~~~--~~~~~~~~~~--- 96 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILASCSY------DGKVLIWKEEN--GRWSQIAVHA--- 96 (753)
T ss_dssp TEEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCTTSCSEEEEEET------TSCEEEEEEET--TEEEEEEEEC---
T ss_pred CcEEEEecCCCCCccceecc---CCcCceEEEEecCCCCCCEEEEEeC------CCeEEEEECCC--Cccccccccc---
Confidence 56888898877777664331 11111222222 2 455566654 23489999988 5566554211
Q ss_pred CCccccEEEEE-CC--cEEEEEecCCCCCccCceeEEeCCCC
Q 004198 151 GPRYGHVMDLV-SQ--RYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 151 ~~R~~hs~~~~-~~--~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
.....-..+.+ .+ +.+++.|+.++ .+.+||+.+.
T Consensus 97 ~h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~ 133 (753)
T 3jro_A 97 VHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 133 (753)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSS
T ss_pred CCCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecC
Confidence 11112222233 32 45677777654 4677777654
No 101
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=89.91 E-value=12 Score=38.44 Aligned_cols=151 Identities=10% Similarity=0.058 Sum_probs=70.5
Q ss_pred cEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccc
Q 004198 76 SVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYG 155 (769)
Q Consensus 76 dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~ 155 (769)
.+|.+|..+++++.+........| ...+..-++++|+.+..+ ....+++||+.+ .++..+.... .. ...-
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p--~~~a~spdg~l~~~~~~~----~~~~v~~~~~~~--g~~~~~~~~~-~~-~~~p 88 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNP--TYLALSAKDCLYSVDKED----DEGGIAAWQIDG--QTAHKLNTVV-AP-GTPP 88 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCC--CCEEECTTCEEEEEEEET----TEEEEEEEEEET--TEEEEEEEEE-EE-SCCC
T ss_pred EEEEEcCCCCeEEEeeeeeccCCc--ceEEEccCCeEEEEEecC----CCceEEEEEecC--CcEEEeeeee-cC-CCCC
Confidence 477888888888775432111111 112222256777765421 135699999977 4455443200 00 1111
Q ss_pred cEEEEE-CCcEEEEEecCCCCCccCceeEEeCC-CCCceE-EEcCCCCCCCCcc----cccEEEEecCCEEEEEcccCCC
Q 004198 156 HVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTA-QKPYVW-QRLNPEGDRPSAR----MYATASARSDGMFLLCGGRDAS 228 (769)
Q Consensus 156 hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~-~~~~~W-~~v~~~~~~P~~r----~~hsa~~~~~g~l~v~GG~~~~ 228 (769)
..+++. +++.+|+.+..+ +.+.+|++. ....+. ..+...+..|.+| ..+......++.+|+.+..
T Consensus 89 ~~~a~spdg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~--- 160 (347)
T 3hfq_A 89 AYVAVDEARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG--- 160 (347)
T ss_dssp SEEEEETTTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT---
T ss_pred EEEEECCCCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC---
Confidence 233344 344566655322 346677764 221111 1222222222211 2344555677777765432
Q ss_pred CCcccceEEEecCCCCceE
Q 004198 229 GAPLADAYGLLMHRNGQWE 247 (769)
Q Consensus 229 ~~~l~d~~~ld~~~~~~W~ 247 (769)
-+.++.|+...++...
T Consensus 161 ---~~~v~~~~~~~~g~~~ 176 (347)
T 3hfq_A 161 ---SDKVYVYNVSDAGQLS 176 (347)
T ss_dssp ---TTEEEEEEECTTSCEE
T ss_pred ---CCEEEEEEECCCCcEE
Confidence 1356667766444443
No 102
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=89.84 E-value=0.15 Score=54.23 Aligned_cols=68 Identities=10% Similarity=0.046 Sum_probs=38.9
Q ss_pred CEEEEccCCCCHHHHH-------HHHHHhCCCCCCCCCcceeEEEeccccCCCCChH------HHHHHHHHh-hhcCCCc
Q 004198 582 PVKVFGDLHGQFGDLM-------RLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSL------ETITLLLAL-KIEYPEN 647 (769)
Q Consensus 582 ~i~viGDiHG~~~~l~-------~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~------e~l~ll~~l-k~~~p~~ 647 (769)
.++++||.|.-...-. ++.+.. .+ + -+|++||+++.|..+. +.+..++.- +....-.
T Consensus 5 ~f~~igD~g~g~~~q~~va~~m~~~~~~~--~p-d------~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P 75 (342)
T 3tgh_A 5 RFASLGDWGKDTKGQILNAKYFKQFIKNE--RV-T------FIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMP 75 (342)
T ss_dssp EEEECCSCBSCCHHHHHHHHHHHHHHHHT--TC-C------EEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSE
T ss_pred EEEEEecCCCCCchHHHHHHHHHHHHhhc--CC-C------EEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCC
Confidence 4889999997543222 222221 12 1 5788999998887432 222222211 0122234
Q ss_pred eEEecCCcchh
Q 004198 648 VHLIRGNHEAA 658 (769)
Q Consensus 648 v~llrGNHE~~ 658 (769)
++.+.||||..
T Consensus 76 ~~~vlGNHD~~ 86 (342)
T 3tgh_A 76 FFTVLGTRDWT 86 (342)
T ss_dssp EEECCCHHHHT
T ss_pred EEEeCCCCccC
Confidence 69999999975
No 103
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=89.83 E-value=18 Score=42.42 Aligned_cols=190 Identities=9% Similarity=0.019 Sum_probs=97.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC-C
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG-P 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~-~ 152 (769)
+-+++||+.+++++.+...+ .+ ...-.+++.. ++.||+... .-+++||+.+ .+|.........+. .
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~-~~-~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~--~~~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEK-NE-LLDVRVFYEDKNKKIWIGTH--------AGVFVIDLAS--KKVIHHYDTSNSQLLE 494 (781)
T ss_dssp EEEEEECSSSCEEEECCSTT-TC-CCCEEEEEECTTSEEEEEET--------TEEEEEESSS--SSCCEEECTTTSSCSC
T ss_pred CCEEEEcCCCCcEEEeccCC-CC-CCeEEEEEECCCCCEEEEEC--------CceEEEeCCC--CeEEecccCccccccc
Confidence 45778888888888765321 11 1111223222 357887432 3389999988 44655542111111 1
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
..-.+++...++.|++.... .-+++||+.++ ++.........|.... .+...-.+|.+++...
T Consensus 495 ~~i~~i~~d~~g~lWigt~~------~Gl~~~~~~~~--~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-------- 557 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFG------GGVGIYTPDMQ--LVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-------- 557 (781)
T ss_dssp SCEEEEEECTTCCEEEEESS------SCEEEECTTCC--EEEEECTTTTCSCSCE-EEEEECTTSCEEEEET--------
T ss_pred ceeEEEEEcCCCCEEEEEcC------CCEEEEeCCCC--eEEEccCCCCCCCCee-EEEEECCCCCEEEEEC--------
Confidence 11223333345566664321 23889999888 7777654322232222 2233335678887431
Q ss_pred cce-EEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCC
Q 004198 233 ADA-YGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (769)
Q Consensus 233 ~d~-~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 306 (769)
+-+ +.|+..+. +++........|.... .+++.- ++.|++.+. +.+.+||+++.+++.....
T Consensus 558 ~Glv~~~d~~~~-~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-----------~Gl~~~~~~~~~~~~~~~~ 620 (781)
T 3v9f_A 558 EGLVCFPSARNF-DYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-----------TGISCYITSKKCFYTYDHS 620 (781)
T ss_dssp TEEEEESCTTTC-CCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-----------SCEEEEETTTTEEEEECGG
T ss_pred CCceEEECCCCC-cEEEccccCCCCCceE-EEEEECCCCCEEEEcC-----------CceEEEECCCCceEEeccc
Confidence 224 55665433 2332221111122223 233332 577777532 3489999999988877543
No 104
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=89.58 E-value=11 Score=38.23 Aligned_cols=178 Identities=12% Similarity=0.032 Sum_probs=95.5
Q ss_pred cccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE-Eec
Q 004198 13 YRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT-RIR 91 (769)
Q Consensus 13 y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~-~l~ 91 (769)
+|+.+++-...-+++...+++.++.. +++||+..- ..+.+++||+.+.+=. .++
T Consensus 49 iD~~tg~v~~~i~l~~~~fgeGi~~~------g~~lyv~t~-------------------~~~~v~viD~~t~~v~~~i~ 103 (266)
T 2iwa_A 49 VALQTGKVENIHKMDDSYFGEGLTLL------NEKLYQVVW-------------------LKNIGFIYDRRTLSNIKNFT 103 (266)
T ss_dssp EETTTCCEEEEEECCTTCCEEEEEEE------TTEEEEEET-------------------TCSEEEEEETTTTEEEEEEE
T ss_pred EECCCCCEEEEEecCCCcceEEEEEe------CCEEEEEEe-------------------cCCEEEEEECCCCcEEEEEE
Confidence 34444444333334444567777777 789998854 2468999999987533 232
Q ss_pred CCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc-cccEEEEECCcEEEEEe
Q 004198 92 PAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR-YGHVMDLVSQRYLVSVS 170 (769)
Q Consensus 92 ~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R-~~hs~~~~~~~~l~v~G 170 (769)
.+ .| .+.+++.-++.+|+.-| .+.++++|+.+.+ .-..+.+ +..+.+. .-..+... ++.+|+--
T Consensus 104 -~g-~~---~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~-v~~~I~V-g~~~~p~~~~nele~~-dg~lyvn~ 168 (266)
T 2iwa_A 104 -HQ-MK---DGWGLATDGKILYGSDG-------TSILYEIDPHTFK-LIKKHNV-KYNGHRVIRLNELEYI-NGEVWANI 168 (266)
T ss_dssp -CC-SS---SCCEEEECSSSEEEECS-------SSEEEEECTTTCC-EEEEEEC-EETTEECCCEEEEEEE-TTEEEEEE
T ss_pred -CC-CC---CeEEEEECCCEEEEECC-------CCeEEEEECCCCc-EEEEEEE-CCCCcccccceeEEEE-CCEEEEec
Confidence 22 12 34555555678998643 4679999998832 2334433 2222221 11133334 44777643
Q ss_pred cCCCCCccCceeEEeCCCCCc-eEEEcCCC------CCCCCcccccEEEEec-CCEEEEEcccCCCCCcccceEEEecC
Q 004198 171 GNDGKRVLSDAWALDTAQKPY-VWQRLNPE------GDRPSARMYATASARS-DGMFLLCGGRDASGAPLADAYGLLMH 241 (769)
Q Consensus 171 G~~~~~~~~dv~~~d~~~~~~-~W~~v~~~------~~~P~~r~~hsa~~~~-~g~l~v~GG~~~~~~~l~d~~~ld~~ 241 (769)
. ..+++.+.|+++... .|-.+... ...+..-.-+...... .+.+||.|+. .+.++..+..
T Consensus 169 ~-----~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~------~~~v~~i~l~ 236 (266)
T 2iwa_A 169 W-----QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL------WPKLFEIKLH 236 (266)
T ss_dssp T-----TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT------CSEEEEEEEE
T ss_pred C-----CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC------CCeEEEEEEe
Confidence 2 246899999988732 34443210 0001111112333333 4588988864 3556666654
No 105
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=89.46 E-value=21 Score=36.60 Aligned_cols=177 Identities=14% Similarity=0.122 Sum_probs=86.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEE-ECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+..+|+.+.+-...-..+ +. ...+++. -++..++.|+. ...+.+||+.+....+... + ...
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~--~~--~~~~~~~spdg~~l~~g~~------dg~v~i~~~~~~~~~~~~~---~---~~~ 165 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAG--PV--DAWTLAFSPDSQYLATGTH------VGKVNIFGVESGKKEYSLD---T---RGK 165 (321)
T ss_dssp SEEEEEETTTTEEEEEEECC--TT--CCCCEEECTTSSEEEEECT------TSEEEEEETTTCSEEEEEE---C---SSS
T ss_pred CcEEEEECCCCCEEEEEeCC--Cc--cEEEEEECCCCCEEEEEcC------CCcEEEEEcCCCceeEEec---C---CCc
Confidence 57888999887644322211 11 1112222 23455555553 2458889988754322211 1 111
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEE-EcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQ-RLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~-~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
.-.+++...++.+++.|+.++ .+.+||+.+. +-. .+... ...-.+.....++.+++.|+.+.
T Consensus 166 ~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~--~~~~~~~~h-----~~~v~~l~~spd~~~l~s~s~dg----- 228 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDG-----IINIFDIATG--KLLHTLEGH-----AMPIRSLTFSPDSQLLVTASDDG----- 228 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----CEEEEETTTT--EEEEEECCC-----SSCCCEEEECTTSCEEEEECTTS-----
T ss_pred eEEEEEECCCCCEEEEEcCCC-----eEEEEECCCC--cEEEEEccc-----CCceeEEEEcCCCCEEEEEcCCC-----
Confidence 222343444556777777654 4788998876 322 22211 11112344457788888887543
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
.+..++..... ..- ...+- ...-.++++. ++..++.|+.. ..+.+||..+.+
T Consensus 229 -~i~iwd~~~~~-~~~-~~~~h---~~~v~~~~~sp~~~~l~s~s~D---------~~v~iwd~~~~~ 281 (321)
T 3ow8_A 229 -YIKIYDVQHAN-LAG-TLSGH---ASWVLNVAFCPDDTHFVSSSSD---------KSVKVWDVGTRT 281 (321)
T ss_dssp -CEEEEETTTCC-EEE-EECCC---SSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTTE
T ss_pred -eEEEEECCCcc-eeE-EEcCC---CCceEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCE
Confidence 24555554321 111 11111 0111122332 56677777642 348899987764
No 106
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=88.42 E-value=22 Score=35.63 Aligned_cols=150 Identities=13% Similarity=0.061 Sum_probs=72.2
Q ss_pred CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 110 TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 110 ~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
+..++.|+. ...+.+||+.+.. ......... .. ..-.++....++.+++.|+.++ .+.+||+.+.
T Consensus 109 ~~~l~~~~~------d~~i~~~d~~~~~--~~~~~~~~~-~~-~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~~~ 173 (337)
T 1gxr_A 109 GCTLIVGGE------ASTLSIWDLAAPT--PRIKAELTS-SA-PACYALAISPDSKVCFSCCSDG-----NIAVWDLHNQ 173 (337)
T ss_dssp SSEEEEEES------SSEEEEEECCCC----EEEEEEEC-SS-SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTT
T ss_pred CCEEEEEcC------CCcEEEEECCCCC--cceeeeccc-CC-CceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCC
Confidence 444555543 2458999998843 222211001 11 1112333334445666676554 4888998876
Q ss_pred CceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-C
Q 004198 190 PYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-G 268 (769)
Q Consensus 190 ~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~ 268 (769)
+....-.. ......+.....++.+++.|+.+ ..+..++..+...-..... ...-.++++. +
T Consensus 174 --~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~------~~~v~~~~~s~~ 235 (337)
T 1gxr_A 174 --TLVRQFQG----HTDGASCIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHDF------TSQIFSLGYCPT 235 (337)
T ss_dssp --EEEEEECC----CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEEC------SSCEEEEEECTT
T ss_pred --ceeeeeec----ccCceEEEEECCCCCEEEEEecC------CcEEEEECCCCceEeeecC------CCceEEEEECCC
Confidence 33222111 11122334444577677777643 3466667654311111111 1111233332 5
Q ss_pred CEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 269 ARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 269 ~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
+..+++|+.. ..+.+||..+.+-.
T Consensus 236 ~~~l~~~~~~---------~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 236 GEWLAVGMES---------SNVEVLHVNKPDKY 259 (337)
T ss_dssp SSEEEEEETT---------SCEEEEETTSSCEE
T ss_pred CCEEEEEcCC---------CcEEEEECCCCCeE
Confidence 6677777632 34899999877543
No 107
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=88.37 E-value=44 Score=39.07 Aligned_cols=189 Identities=6% Similarity=-0.048 Sum_probs=96.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC---CCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG---QGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g---~~p 150 (769)
+-+++||+.+++++.+...........-.+++.. ++.||+... +-+++||+.+ .+|..+.... ..+
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~--~~~~~~~~~~~~~~~~ 496 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--------SALVRFNPEQ--RSFTTIEKEKDGTPVV 496 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--------SCEEEEETTT--TEEEECCBCTTCCBCC
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--------CceeEEeCCC--CeEEEccccccccccC
Confidence 4578889888888877542111001111222222 357777542 2389999988 5687774321 111
Q ss_pred CCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCC--CcccccEEEEecCCEEEEEcccCCC
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRP--SARMYATASARSDGMFLLCGGRDAS 228 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P--~~r~~hsa~~~~~g~l~v~GG~~~~ 228 (769)
. ..-.++....++.+++... .-+++||+.+. ++ ........+ ......+...-.+|.+++...
T Consensus 497 ~-~~i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~--~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~---- 561 (795)
T 4a2l_A 497 S-KQITTLFRDSHKRLWIGGE-------EGLSVFKQEGL--DI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR---- 561 (795)
T ss_dssp C-CCEEEEEECTTCCEEEEES-------SCEEEEEEETT--EE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES----
T ss_pred C-ceEEEEEECCCCCEEEEeC-------CceEEEeCCCC--eE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC----
Confidence 1 1112333334556777442 24889999887 66 433210001 111112223335678887431
Q ss_pred CCcccceEEEecCCCCceEEEeC-CCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCC
Q 004198 229 GAPLADAYGLLMHRNGQWEWTLA-PGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (769)
Q Consensus 229 ~~~l~d~~~ld~~~~~~W~W~~~-~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 306 (769)
.-+++|+..+. +++.... .+. |.... .+.+.- ++.|++.+. ..+.+||+++.+++.+...
T Consensus 562 ----~Gl~~~d~~~~-~~~~~~~~~gl-~~~~i-~~i~~d~~g~lWi~t~-----------~Gl~~~~~~~~~~~~~~~~ 623 (795)
T 4a2l_A 562 ----EGFYCFNEKDK-QIKRYNTTNGL-PNNVV-YGILEDSFGRLWLSTN-----------RGISCFNPETEKFRNFTES 623 (795)
T ss_dssp ----SCEEEEETTTT-EEEEECGGGTC-SCSCE-EEEEECTTSCEEEEET-----------TEEEEEETTTTEEEEECGG
T ss_pred ----CCceeECCCCC-cEEEeCCCCCC-chhhe-EEEEECCCCCEEEEcC-----------CceEEEcCCCCcEEEcCCc
Confidence 24677887654 3322211 122 22222 222222 567777642 3489999999998876543
No 108
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=88.36 E-value=22 Score=35.56 Aligned_cols=191 Identities=10% Similarity=0.069 Sum_probs=91.5
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEE-C-CEEEEECccCCCCCCcCcEEEEEccCCcceEEEe-eecCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-G-TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRV-VVQGQGP 150 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~-~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~-~~~g~~p 150 (769)
.+.+++||+.++++..+...........-++++.. + +.+|+.... +.+++||+. .+ ...+ .......
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~-g~--~~~~~~~~~~~~ 114 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD-GT--FEEIAKKDSEGR 114 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT-SC--EEECCSBCTTSC
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC-CC--EEEEEeccCCCc
Confidence 35799999999998876531000011112333332 4 688886541 258999987 43 3333 2111111
Q ss_pred CCccccEEEEECCcEEEEEecCCC----------CCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEe----cC
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDG----------KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASAR----SD 216 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~----------~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~----~~ 216 (769)
....-+.++...++.+|+....++ ......+++||+. . +...+.... ......+.. .+
T Consensus 115 ~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g--~~~~~~~~~-----~~~~~i~~~~~~d~d 186 (314)
T 1pjx_A 115 RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G--QMIQVDTAF-----QFPNGIAVRHMNDGR 186 (314)
T ss_dssp BCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S--CEEEEEEEE-----SSEEEEEEEECTTSC
T ss_pred cccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C--CEEEeccCC-----CCcceEEEecccCCC
Confidence 111223454555557777654321 1123578999987 4 343332110 011233334 55
Q ss_pred C-EEEEEcccCCCCCcccceEEEecCCCCce----EEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcE
Q 004198 217 G-MFLLCGGRDASGAPLADAYGLLMHRNGQW----EWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAV 290 (769)
Q Consensus 217 g-~l~v~GG~~~~~~~l~d~~~ld~~~~~~W----~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v 290 (769)
+ .+|+.... .+.++.|+...++.+ .+...+... ...-..+++- ++.+||.... .+.+
T Consensus 187 g~~l~v~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~--~~~p~~i~~d~~G~l~v~~~~---------~~~i 249 (314)
T 1pjx_A 187 PYQLIVAETP------TKKLWSYDIKGPAKIENKKVWGHIPGTH--EGGADGMDFDEDNNLLVANWG---------SSHI 249 (314)
T ss_dssp EEEEEEEETT------TTEEEEEEEEETTEEEEEEEEEECCCCS--SCEEEEEEEBTTCCEEEEEET---------TTEE
T ss_pred CCEEEEEECC------CCeEEEEECCCCCccccceEEEECCCCC--CCCCCceEECCCCCEEEEEcC---------CCEE
Confidence 6 56665421 245677775423322 122222110 0111233333 5778876421 2358
Q ss_pred EEEECCCCc
Q 004198 291 AVLDTAAGV 299 (769)
Q Consensus 291 ~~yd~~t~~ 299 (769)
.+||+++++
T Consensus 250 ~~~d~~~g~ 258 (314)
T 1pjx_A 250 EVFGPDGGQ 258 (314)
T ss_dssp EEECTTCBS
T ss_pred EEEcCCCCc
Confidence 999988543
No 109
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=88.18 E-value=18 Score=38.55 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=44.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
+.+.++|+.+++-...... . .....+...++.+++.|+. ...++.+|.......-..+. +. . ..
T Consensus 169 g~v~iWd~~~~~~~~~~~~---h--~~~v~~~s~~~~~l~sgs~------d~~i~~~d~~~~~~~~~~~~--~h-~--~~ 232 (420)
T 4gga_A 169 AEVQLWDVQQQKRLRNMTS---H--SARVGSLSWNSYILSSGSR------SGHIHHHDVRVAEHHVATLS--GH-S--QE 232 (420)
T ss_dssp SCEEEEETTTTEEEEEECC---C--SSCEEEEEEETTEEEEEET------TSEEEEEETTSSSCEEEEEE--CC-S--SC
T ss_pred CeEEEEEcCCCcEEEEEeC---C--CCceEEEeeCCCEEEEEeC------CCceeEeeecccceeeEEec--cc-c--cc
Confidence 5688889988764332211 1 1122333445556666653 24477888776332222221 11 1 11
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
-..+....++.+++.|+.++ .+.++|..+.
T Consensus 233 ~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~ 262 (420)
T 4gga_A 233 VCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 262 (420)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEESSCC
T ss_pred eeeeeecCCCCeeeeeeccc-----cceEEeeccc
Confidence 11222233345666666554 3566666544
No 110
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=88.17 E-value=24 Score=37.07 Aligned_cols=94 Identities=9% Similarity=0.052 Sum_probs=46.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+..||+.+.+-...-.. ....-.+++.. ++.+++.|+. ...+.+||+.+.... ..+. + ...
T Consensus 119 g~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~s~------d~~i~iwd~~~~~~~-~~~~--~---h~~ 182 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREIDQA----HVSEITKLKFFPSGEALISSSQ------DMQLKIWSVKDGSNP-RTLI--G---HRA 182 (420)
T ss_dssp SCEEEECTTSCEEEEETTS----SSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCCCC-EEEE--C---CSS
T ss_pred CCEEEEeCCCcceeeeccc----ccCccEEEEECCCCCEEEEEeC------CCeEEEEeCCCCcCc-eEEc--C---CCC
Confidence 4688889887665443211 11111122222 3445555553 245899999874311 1121 1 111
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
.-.++....+..+++.|+.++ .+.+||+.+.
T Consensus 183 ~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~ 213 (420)
T 3vl1_A 183 TVTDIAIIDRGRNVLSASLDG-----TIRLWECGTG 213 (420)
T ss_dssp CEEEEEEETTTTEEEEEETTS-----CEEEEETTTT
T ss_pred cEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCC
Confidence 112333444445666777654 4778888776
No 111
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=87.69 E-value=17 Score=36.95 Aligned_cols=146 Identities=10% Similarity=0.115 Sum_probs=64.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcc--eEEEeeecC----
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKF--KWHRVVVQG---- 147 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~--~W~~~~~~g---- 147 (769)
+.+.+||+.+.+....-... .+ -.+++.. ++..++.++.+ .......+.+||+.+... .+.......
T Consensus 96 g~i~iwd~~~~~~~~~~~~~---~~--v~~~~~~~~~~~l~~~~~~-~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSP---VP--VKRVEFSPCGNYFLAILDN-VMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp TEEEEEETTTCCEEEEEECS---SC--EEEEEECTTSSEEEEEECC-BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred CeEEEEECCCCcEEEEeecC---CC--eEEEEEccCCCEEEEecCC-ccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 46888999887654433221 11 1112221 33444444321 111234577887765321 222221000
Q ss_pred -CCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 148 -QGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 148 -~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
.......-.+++...+..+++.|+.++ .+.+||+.+..-....+... .....+.....++.+++.|+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d 239 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKDG-----KISKYDVSNNYEYVDSIDLH-----EKSISDMQFSPDLTYFITSSRD 239 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETTS-----EEEEEETTTTTEEEEEEECC-----SSCEEEEEECTTSSEEEEEETT
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCCC-----EEEEEECCCCcEeEEEEecC-----CCceeEEEECCCCCEEEEecCC
Confidence 000000122232333445666666543 58889998731122222211 1122334445677777777643
Q ss_pred CCCCcccceEEEecCC
Q 004198 227 ASGAPLADAYGLLMHR 242 (769)
Q Consensus 227 ~~~~~l~d~~~ld~~~ 242 (769)
..+..++..+
T Consensus 240 ------~~i~v~d~~~ 249 (369)
T 3zwl_B 240 ------TNSFLVDVST 249 (369)
T ss_dssp ------SEEEEEETTT
T ss_pred ------ceEEEEECCC
Confidence 2456666654
No 112
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=87.33 E-value=0.36 Score=54.59 Aligned_cols=66 Identities=15% Similarity=0.086 Sum_probs=41.5
Q ss_pred CEEEEccCCCCHH----------------HHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh----------HHHHH
Q 004198 582 PVKVFGDLHGQFG----------------DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS----------LETIT 635 (769)
Q Consensus 582 ~i~viGDiHG~~~----------------~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s----------~e~l~ 635 (769)
.|+.++|+||++. .+..+++........ .-+|..||.++..+.+ ..++.
T Consensus 21 ~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~-----~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~ 95 (527)
T 3qfk_A 21 AFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQ-----SFKIDNGDFLQGSPFCNYLIAHSGSSQPLVD 95 (527)
T ss_dssp EEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSE-----EEEEECSCCSSSSHHHHHHHHTTCSSHHHHH
T ss_pred EEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCC-----EEEEECCCcCCCcHHHHHHhhcccCcchHHH
Confidence 3889999999863 566666665422111 1234479999987543 34555
Q ss_pred HHHHhhhcCCCceEEecCCcch
Q 004198 636 LLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 636 ll~~lk~~~p~~v~llrGNHE~ 657 (769)
+|..+. --++..||||.
T Consensus 96 ~ln~lg-----~D~~t~GNHef 112 (527)
T 3qfk_A 96 FYNRMA-----FDFGTLGNHEF 112 (527)
T ss_dssp HHHHTC-----CCEECCCGGGG
T ss_pred HHHhcC-----CcEEecccccc
Confidence 665553 23566899994
No 113
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=87.05 E-value=34 Score=39.11 Aligned_cols=116 Identities=9% Similarity=-0.055 Sum_probs=56.0
Q ss_pred cCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCC
Q 004198 178 LSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPS 257 (769)
Q Consensus 178 ~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~ 257 (769)
...++++|+.+. +-..+... . .............++..++++..+... ....++.++..+...............
T Consensus 234 ~~~l~~~d~~~~--~~~~~~~~-~-~~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATG--KTVYLQTG-E-PKEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETDKHY 308 (706)
T ss_dssp EEEEEEEETTTT--EEEECCCC-S-CTTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEECSSC
T ss_pred eeEEEEEECCCC--ceEeeccC-C-CCceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccCCCe
Confidence 356899999887 44444321 0 111222233445677655555443322 245778888764312222211100000
Q ss_pred cccceEEEE-e--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccC
Q 004198 258 PRYQHAAVF-V--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 258 ~R~~hs~~~-~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 305 (769)
.......++ - ++++++.+...+ ...+|.+|......+.+..
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g-------~~~l~~~~~~~~~~~~l~~ 352 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG-------WNHLYLYDTTGRLIRQVTK 352 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS-------SCEEEEEETTSCEEEECCC
T ss_pred ECccCCceeecCCCCEEEEEEccCC-------ccEEEEEECCCCEEEecCC
Confidence 000112233 2 677666554322 3468999977777776643
No 114
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=86.96 E-value=38 Score=39.54 Aligned_cols=181 Identities=7% Similarity=-0.016 Sum_probs=93.3
Q ss_pred cEEEEECCCCcEEEecCCCCCCcc-cccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 76 SVHLYDVLTRKWTRIRPAGEPPSP-RAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 76 dv~~yD~~~~~W~~l~~~g~~P~~-R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
-+++||+.+++|+........+.+ ..-.+++.. ++.||+... . .-+++||+.+ .++..+.....++...
T Consensus 470 Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~-----~Gl~~~~~~~--~~~~~~~~~~~l~~~~ 540 (781)
T 3v9f_A 470 GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF--G-----GGVGIYTPDM--QLVRKFNQYEGFCSNT 540 (781)
T ss_dssp EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES--S-----SCEEEECTTC--CEEEEECTTTTCSCSC
T ss_pred ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc--C-----CCEEEEeCCC--CeEEEccCCCCCCCCe
Confidence 488999999998877543211111 111222222 357777432 1 2389999988 5677774322222221
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCce-eEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDA-WALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv-~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
. .++....++.|++... +-+ .+||+.++ ++.........|.... .+.+.-.+|.|++.+.
T Consensus 541 i-~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~--~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-------- 601 (781)
T 3v9f_A 541 I-NQIYRSSKGQMWLATG-------EGLVCFPSARNF--DYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-------- 601 (781)
T ss_dssp E-EEEEECTTSCEEEEET-------TEEEEESCTTTC--CCEEECGGGTCSCCCC-CEEEECSSSCEEEECS--------
T ss_pred e-EEEEECCCCCEEEEEC-------CCceEEECCCCC--cEEEccccCCCCCceE-EEEEECCCCCEEEEcC--------
Confidence 1 2222334456666432 235 88898887 5555443222333332 4455556788888642
Q ss_pred cceEEEecCCCCceEEEe-CCCCCCCcccc-eEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCC
Q 004198 233 ADAYGLLMHRNGQWEWTL-APGVAPSPRYQ-HAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAA 297 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~-~~~~~P~~R~~-hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t 297 (769)
+-+.+|+..+. ++.... ..+. +...+. .+++.. ++.| .|||. +.+.+||++.
T Consensus 602 ~Gl~~~~~~~~-~~~~~~~~dGl-~~~~f~~~~~~~~~~G~l-~~g~~----------~Gl~~f~p~~ 656 (781)
T 3v9f_A 602 TGISCYITSKK-CFYTYDHSNNI-PQGSFISGCVTKDHNGLI-YFGSI----------NGLCFFNPDI 656 (781)
T ss_dssp SCEEEEETTTT-EEEEECGGGTC-CSSCEEEEEEEECTTSCE-EEEET----------TEEEEECSCC
T ss_pred CceEEEECCCC-ceEEecccCCc-cccccccCceEECCCCEE-EEECC----------CceEEEChhh
Confidence 34677887654 222222 2233 333332 233333 4555 45662 3478888864
No 115
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=86.95 E-value=5.7 Score=40.27 Aligned_cols=137 Identities=12% Similarity=-0.039 Sum_probs=83.0
Q ss_pred cccccceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEE-Eec
Q 004198 13 YRTLETYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWT-RIR 91 (769)
Q Consensus 13 y~~~~~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~-~l~ 91 (769)
+|+.+++-...- +|..-++..++.. +++||+.... .+.+++||+.+.+-. +++
T Consensus 80 iD~~Tgkv~~~~-l~~~~FgeGit~~------g~~Ly~ltw~-------------------~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 80 LSLESAQPVWME-RLGNIFAEGLASD------GERLYQLTWT-------------------EGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp CCSSCSSCSEEE-ECTTCCEEEEEEC------SSCEEEEESS-------------------SCEEEEEETTTTEEEEEEE
T ss_pred EECCCCcEEeEE-CCCCcceeEEEEe------CCEEEEEEcc-------------------CCEEEEEECCcCcEEEEEe
Confidence 455554444333 5666678888887 8899998542 368999999987644 333
Q ss_pred CCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccc-cEEEEECCcEEEEEe
Q 004198 92 PAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYG-HVMDLVSQRYLVSVS 170 (769)
Q Consensus 92 ~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~-hs~~~~~~~~l~v~G 170 (769)
. +-.+.+++..++.+|+.-| .+.++.+|+.+.+ .-.++.+ +..+.+... --+...+ +.+|+--
T Consensus 134 ~------~~eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~-v~~~I~V-~~~g~~v~~lNeLe~~d-G~lyanv 197 (268)
T 3nok_A 134 Y------SGEGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFA-LVGAVQV-KLRGQPVELINELECAN-GVIYANI 197 (268)
T ss_dssp C------SSCCCCEEEETTEEEEECS-------SSEEEEECTTTCC-EEEEEEC-EETTEECCCEEEEEEET-TEEEEEE
T ss_pred C------CCceeEEecCCCEEEEECC-------CCEEEEEcCCCCe-EEEEEEe-CCCCcccccccccEEeC-CEEEEEE
Confidence 2 2345788888889999765 3579999999842 2334433 222222111 1233334 4777522
Q ss_pred cCCCCCccCceeEEeCCCCCc-eEEEc
Q 004198 171 GNDGKRVLSDAWALDTAQKPY-VWQRL 196 (769)
Q Consensus 171 G~~~~~~~~dv~~~d~~~~~~-~W~~v 196 (769)
...+++.+.|+++... .|-.+
T Consensus 198 -----w~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 198 -----WHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp -----TTCSEEEEECTTTCBEEEEEEC
T ss_pred -----CCCCeEEEEeCCCCcEEEEEEC
Confidence 1246899999988732 34444
No 116
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=86.75 E-value=50 Score=37.95 Aligned_cols=245 Identities=8% Similarity=-0.031 Sum_probs=116.7
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCc-ccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPS-PRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~-~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
...+|+.+.....|+.+........ .........+ +++.++++... .+.....++++|+.+ .+........
T Consensus 97 ~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~-~G~~~~~i~v~d~~t--g~~~~~~~~~--- 170 (710)
T 2xdw_A 97 QRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSA-SGSDWVTIKFMKVDG--AKELPDVLER--- 170 (710)
T ss_dssp SCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEE-TTCSCEEEEEEETTT--TEEEEEEEEE---
T ss_pred EEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcC-CCCceEEEEEEECCC--CCCCcccccC---
Confidence 4578888887788887643211000 0011112222 44444443321 121234799999998 4455432111
Q ss_pred CCccccEEEEECCcEEEEEecCCCC-----------CccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEE
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDGK-----------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMF 219 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~~-----------~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l 219 (769)
... ...+...++..++++..+.. .....+|++++.+..-+-..+.... ..+..........+|+.
T Consensus 171 -~~~-~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~--~~~~~~~~~~~SpDg~~ 246 (710)
T 2xdw_A 171 -VKF-SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP--DEPKWMGGAELSDDGRY 246 (710)
T ss_dssp -ECS-CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT--TCTTCEEEEEECTTSCE
T ss_pred -ccc-ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC--CCCeEEEEEEEcCCCCE
Confidence 111 12323323344444444332 2345689999877621111221111 11222334445677766
Q ss_pred EEEcccCCCCCcccceEEEecCC------CC-ceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEE
Q 004198 220 LLCGGRDASGAPLADAYGLLMHR------NG-QWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAV 292 (769)
Q Consensus 220 ~v~GG~~~~~~~l~d~~~ld~~~------~~-~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~ 292 (769)
+++....... ..+++|.++... .. .+........ . ......--++.+|+.+.... ....+++
T Consensus 247 l~~~~~~~~~-~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~---~-~~~~~s~dg~~l~~~s~~~~------~~~~l~~ 315 (710)
T 2xdw_A 247 VLLSIREGCD-PVNRLWYCDLQQESNGITGILKWVKLIDNFE---G-EYDYVTNEGTVFTFKTNRHS------PNYRLIN 315 (710)
T ss_dssp EEEEEECSSS-SCCEEEEEEGGGSSSSSCSSCCCEEEECSSS---S-CEEEEEEETTEEEEEECTTC------TTCEEEE
T ss_pred EEEEEEccCC-CccEEEEEECcccccccCCccceEEeeCCCC---c-EEEEEeccCCEEEEEECCCC------CCCEEEE
Confidence 5555432211 146788888764 11 2333322111 1 11122224778888765322 1346999
Q ss_pred EECCCC---cEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEe-CCEEEEEcCcCCCccccceEEecC
Q 004198 293 LDTAAG---VWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASI-GVRIYIYGGLKGDILLDDFLVAEN 360 (769)
Q Consensus 293 yd~~t~---~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~-~~~iyv~GG~~~~~~~~D~~~ld~ 360 (769)
+|+.+. .|+.+..... ...-..++.. ++++++....++ ...++++++
T Consensus 316 ~d~~~~~~~~~~~l~~~~~------------------~~~~~~~~~~~~~~lv~~~~~~g---~~~l~~~~~ 366 (710)
T 2xdw_A 316 IDFTDPEESKWKVLVPEHE------------------KDVLEWVACVRSNFLVLCYLHDV---KNTLQLHDL 366 (710)
T ss_dssp EETTSCCGGGCEEEECCCS------------------SCEEEEEEEETTTEEEEEEEETT---EEEEEEEET
T ss_pred EeCCCCCcccceeccCCCC------------------CCeEEEEEEEcCCEEEEEEEECC---EEEEEEEEC
Confidence 999876 5887654321 1111233444 667777665544 244666665
No 117
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=86.71 E-value=48 Score=37.66 Aligned_cols=83 Identities=11% Similarity=0.059 Sum_probs=47.4
Q ss_pred CCEEEEECccC---------CCCCCcCcEEEEEccCCcceEEEeeecCCCCC--CccccEEEEE---CCc--EEEEEecC
Q 004198 109 GTMVVFQGGIG---------PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG--PRYGHVMDLV---SQR--YLVSVSGN 172 (769)
Q Consensus 109 ~~~Iyv~GG~~---------~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~--~R~~hs~~~~---~~~--~l~v~GG~ 172 (769)
.+.||+..|.. ....+.+.++.+|+.|.+..|+.-......-- .-....++-. +++ .+++.+..
T Consensus 252 ~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~ 331 (599)
T 1w6s_A 252 TNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDR 331 (599)
T ss_dssp TTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECT
T ss_pred CCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECC
Confidence 46888876532 12344578999999998889987632111000 0011122221 221 45555544
Q ss_pred CCCCccCceeEEeCCCCCceEEEc
Q 004198 173 DGKRVLSDAWALDTAQKPYVWQRL 196 (769)
Q Consensus 173 ~~~~~~~dv~~~d~~~~~~~W~~v 196 (769)
+ ..++++|.++....|..-
T Consensus 332 ~-----G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 332 N-----GIVYTLDRTDGALVSANK 350 (599)
T ss_dssp T-----SEEEEEETTTCCEEEEEE
T ss_pred C-----cEEEEEECCCCCEeeccc
Confidence 3 358999998887788764
No 118
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=86.60 E-value=0.29 Score=55.21 Aligned_cols=69 Identities=22% Similarity=0.124 Sum_probs=40.6
Q ss_pred CEEEEccCCCCHH----------HHHHHHHHhCCCCC-CCCCcceeEEEeccccCCCCC-----hHHHHHHHHHhhhcCC
Q 004198 582 PVKVFGDLHGQFG----------DLMRLFDEYGFPST-AGDITYIDYLFLGDYVDRGQH-----SLETITLLLALKIEYP 645 (769)
Q Consensus 582 ~i~viGDiHG~~~----------~l~~~l~~~~~~~~-~~~~~~~~~vfLGD~vDrG~~-----s~e~l~ll~~lk~~~p 645 (769)
.|+.++|+||.+. .+..+++.+..... .+ +..-+|..||+++..+. ...++.+|..+.
T Consensus 10 ~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~--~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg---- 83 (516)
T 1hp1_A 10 TVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEG--GSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG---- 83 (516)
T ss_dssp EEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHT--CEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT----
T ss_pred EEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccC--CCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC----
Confidence 3889999999753 45555554321100 00 00146669999976542 235556666553
Q ss_pred CceEEecCCcch
Q 004198 646 ENVHLIRGNHEA 657 (769)
Q Consensus 646 ~~v~llrGNHE~ 657 (769)
-.++..||||.
T Consensus 84 -~d~~~~GNHEf 94 (516)
T 1hp1_A 84 -YDAMAIGNHEF 94 (516)
T ss_dssp -CCEEECCGGGG
T ss_pred -CCEEeeccccc
Confidence 23678899996
No 119
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=86.55 E-value=26 Score=36.06 Aligned_cols=116 Identities=11% Similarity=0.045 Sum_probs=54.5
Q ss_pred CEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCC
Q 004198 46 PRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHS 124 (769)
Q Consensus 46 ~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~ 124 (769)
.+.+++|.++....+ .-.+|.+|..+++++.+... ... ...+.+..- ++.||+.+..+. .
T Consensus 13 ~~~~~vg~y~~~~~~-------------~i~~~~~d~~~g~~~~~~~~-~~~--~p~~l~~spdg~~l~~~~~~~~---~ 73 (361)
T 3scy_A 13 ELTMLVGTYTSGNSK-------------GIYTFRFNEETGESLPLSDA-EVA--NPSYLIPSADGKFVYSVNEFSK---D 73 (361)
T ss_dssp EEEEEEEECCSSSCC-------------EEEEEEEETTTCCEEEEEEE-ECS--CCCSEEECTTSSEEEEEECCSS---T
T ss_pred ceEEEEEeccCCCCC-------------CEEEEEEeCCCCCEEEeecc-cCC--CCceEEECCCCCEEEEEEccCC---C
Confidence 355667777643321 12466667888888877543 111 111222222 346777665321 1
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQ 188 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~ 188 (769)
...+.+|++..++.+...+..... ....-+.++. .++.+|+....+ ..+.+|++..
T Consensus 74 ~~~v~~~~~~~~~g~~~~~~~~~~--~~~~p~~~~~-dg~~l~~~~~~~-----~~v~~~~~~~ 129 (361)
T 3scy_A 74 QAAVSAFAFDKEKGTLHLLNTQKT--MGADPCYLTT-NGKNIVTANYSG-----GSITVFPIGQ 129 (361)
T ss_dssp TCEEEEEEEETTTTEEEEEEEEEC--SSSCEEEEEE-CSSEEEEEETTT-----TEEEEEEBCT
T ss_pred CCcEEEEEEeCCCCcEEEeeEecc--CCCCcEEEEE-CCCEEEEEECCC-----CEEEEEEeCC
Confidence 234555544432244555532110 1111222323 666777765322 3577777754
No 120
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=85.98 E-value=26 Score=36.48 Aligned_cols=180 Identities=12% Similarity=0.008 Sum_probs=82.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCc-----------ccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEE
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPS-----------PRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHR 142 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~-----------~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~ 142 (769)
+.+..||+.+.+....-.....+. ...-.+++.. ++. ++.|+. ...+++||+.+......
T Consensus 171 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~g~i~~~d~~~~~~~~~- 242 (425)
T 1r5m_A 171 NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGP------KGAIFVYQITEKTPTGK- 242 (425)
T ss_dssp CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEECG------GGCEEEEETTCSSCSEE-
T ss_pred CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcC------CCeEEEEEcCCCceeee-
Confidence 568888988776543322211110 0002222333 445 455553 24599999987432211
Q ss_pred eeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEE
Q 004198 143 VVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLC 222 (769)
Q Consensus 143 ~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~ 222 (769)
+. . ....-.++....+..+++.|+.++ .+.+||+.+....... .. ......+.....++ +++.
T Consensus 243 ~~----~-~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~-~~-----~~~~i~~~~~~~~~-~l~~ 305 (425)
T 1r5m_A 243 LI----G-HHGPISVLEFNDTNKLLLSASDDG-----TLRIWHGGNGNSQNCF-YG-----HSQSIVSASWVGDD-KVIS 305 (425)
T ss_dssp EC----C-CSSCEEEEEEETTTTEEEEEETTS-----CEEEECSSSBSCSEEE-CC-----CSSCEEEEEEETTT-EEEE
T ss_pred ec----c-CCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCccceEe-cC-----CCccEEEEEECCCC-EEEE
Confidence 11 1 111112333444445666666544 4788888765222222 11 11122344445677 6666
Q ss_pred cccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 223 GGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 223 GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
|+.+ ..+..|+..+. .-....... . ..-.++++. ++.+++.|+.. ..+.+||..+..
T Consensus 306 ~~~d------~~i~i~d~~~~-~~~~~~~~~---~-~~i~~~~~s~~~~~l~~~~~d---------g~i~i~~~~~~~ 363 (425)
T 1r5m_A 306 CSMD------GSVRLWSLKQN-TLLALSIVD---G-VPIFAGRISQDGQKYAVAFMD---------GQVNVYDLKKLN 363 (425)
T ss_dssp EETT------SEEEEEETTTT-EEEEEEECT---T-CCEEEEEECTTSSEEEEEETT---------SCEEEEECHHHH
T ss_pred EeCC------CcEEEEECCCC-cEeEecccC---C-ccEEEEEEcCCCCEEEEEECC---------CeEEEEECCCCc
Confidence 6543 24566666533 111111110 0 111222232 56677777632 348888887654
No 121
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=85.55 E-value=32 Score=34.57 Aligned_cols=186 Identities=11% Similarity=0.052 Sum_probs=91.2
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCC-CCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQ-GPG 151 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~-~p~ 151 (769)
.+.+++||+.+++...+...+ +. .+++.. ++.+|+.. .+.+++||+.+ .+++.+..... .+.
T Consensus 34 ~~~i~~~d~~~~~~~~~~~~~-----~~-~~i~~~~dG~l~v~~--------~~~l~~~d~~~--g~~~~~~~~~~~~~~ 97 (297)
T 3g4e_A 34 AKKVCRWDSFTKQVQRVTMDA-----PV-SSVALRQSGGYVATI--------GTKFCALNWKE--QSAVVLATVDNDKKN 97 (297)
T ss_dssp TTEEEEEETTTCCEEEEECSS-----CE-EEEEEBTTSSEEEEE--------TTEEEEEETTT--TEEEEEEECCTTCSS
T ss_pred CCEEEEEECCCCcEEEEeCCC-----ce-EEEEECCCCCEEEEE--------CCeEEEEECCC--CcEEEEEecCCCCCC
Confidence 357999999988766554321 11 222222 34566642 14599999988 45666543211 122
Q ss_pred CccccEEEEECCcEEEEEecCCC------CCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEcc
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDG------KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGG 224 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~------~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG 224 (769)
.|. ..+++..++.+|+..-... ......+|+++.... ...+... ...-...+...++ .+|+...
T Consensus 98 ~~~-~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~~~~-----~~~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 98 NRF-NDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH---VKKYFDQ-----VDISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp EEE-EEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC---EEEEEEE-----ESBEEEEEECTTSCEEEEEEG
T ss_pred CCC-CCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC---EEEEeec-----cccccceEEcCCCCEEEEecC
Confidence 222 2333444556666322111 112356888987643 3332211 0111233344555 5777643
Q ss_pred cCCCCCcccceEEEecC-CCCceE----EEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCC
Q 004198 225 RDASGAPLADAYGLLMH-RNGQWE----WTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAG 298 (769)
Q Consensus 225 ~~~~~~~l~d~~~ld~~-~~~~W~----W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~ 298 (769)
. .+.++.|+.. .++... +..... ....-.++++- ++.|||.... ...|.+||++++
T Consensus 169 ~------~~~i~~~~~d~~~G~~~~~~~~~~~~~---~~~~p~g~~~d~~G~lwva~~~---------~~~v~~~d~~tG 230 (297)
T 3g4e_A 169 L------SYSVDAFDYDLQTGQISNRRSVYKLEK---EEQIPDGMCIDAEGKLWVACYN---------GGRVIRLDPVTG 230 (297)
T ss_dssp G------GTEEEEEEECTTTCCEEEEEEEEECCG---GGCEEEEEEEBTTSCEEEEEET---------TTEEEEECTTTC
T ss_pred C------CCcEEEEeccCCCCcccCcEEEEECCC---CCCCCCeeEECCCCCEEEEEcC---------CCEEEEEcCCCc
Confidence 2 2457777753 333322 222211 11122344442 6778876421 234999999877
Q ss_pred cEEe
Q 004198 299 VWLD 302 (769)
Q Consensus 299 ~W~~ 302 (769)
+...
T Consensus 231 ~~~~ 234 (297)
T 3g4e_A 231 KRLQ 234 (297)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 6543
No 122
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=85.36 E-value=30 Score=34.13 Aligned_cols=189 Identities=7% Similarity=0.061 Sum_probs=93.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcc-cccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSP-RAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~-R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
+.+.+||+.......+...+..+.. ..-++++.. ++.+|+.+.. ....+++||... ..-..+. . +.
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-----~~~~i~~~d~~g--~~~~~~~---~-~~ 119 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-----PTHQIQIYNQYG--QFVRKFG---A-TI 119 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-----GGCEEEEECTTS--CEEEEEC---T-TT
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-----CCCEEEEECCCC--cEEEEec---C-cc
Confidence 4688899885544444432211111 122344442 5688887632 124589999543 2222331 1 11
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCc
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP 231 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~ 231 (769)
...-+.+++..++.+|+.... .+.+++||.... ....+...+. ...-...+...++.+|+....
T Consensus 120 ~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~--~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~~------ 183 (286)
T 1q7f_A 120 LQHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGN--VLHKFGCSKH---LEFPNGVVVNDKQEIFISDNR------ 183 (286)
T ss_dssp CSCEEEEEECTTSCEEEEETT-----TTEEEEECTTSC--EEEEEECTTT---CSSEEEEEECSSSEEEEEEGG------
T ss_pred CCCceEEEEeCCCCEEEEECC-----CCEEEEEcCCCC--EEEEeCCCCc---cCCcEEEEECCCCCEEEEECC------
Confidence 112234444455577776542 246889997654 3333322111 111234444567888886542
Q ss_pred ccceEEEecCCCCceEEEeC-CCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEec
Q 004198 232 LADAYGLLMHRNGQWEWTLA-PGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303 (769)
Q Consensus 232 l~d~~~ld~~~~~~W~W~~~-~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~ 303 (769)
-+.++.|+.... ..+... .+.. ..-.++++- ++.+||...... ..+.+||++...-..+
T Consensus 184 ~~~i~~~~~~g~--~~~~~~~~g~~---~~p~~i~~d~~G~l~v~~~~~~--------~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 184 AHCVKVFNYEGQ--YLRQIGGEGIT---NYPIGVGINSNGEILIADNHNN--------FNLTIFTQDGQLISAL 244 (286)
T ss_dssp GTEEEEEETTCC--EEEEESCTTTS---CSEEEEEECTTCCEEEEECSSS--------CEEEEECTTSCEEEEE
T ss_pred CCEEEEEcCCCC--EEEEEccCCcc---CCCcEEEECCCCCEEEEeCCCC--------EEEEEECCCCCEEEEE
Confidence 245777876432 222221 1110 112334443 578888764211 1589999866544443
No 123
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=85.34 E-value=19 Score=41.55 Aligned_cols=203 Identities=13% Similarity=0.046 Sum_probs=99.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CC-EEEEECccCCC---------CCCcCcEEEEEccCCcceEEE
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GT-MVVFQGGIGPA---------GHSTDDLYVLDLTNDKFKWHR 142 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~-~Iyv~GG~~~~---------~~~~~dl~~~d~~t~~~~W~~ 142 (769)
..++++|+.+++....... ... ...... ++ .||+....... ......+|++++.+...+-..
T Consensus 151 ~~i~v~d~~tg~~~~~~~~----~~~--~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~ 224 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVLE----RVK--FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDIL 224 (710)
T ss_dssp EEEEEEETTTTEEEEEEEE----EEC--SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEE
T ss_pred EEEEEEECCCCCCCccccc----Ccc--cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceE
Confidence 3799999999988765321 111 222222 33 55554322111 122456999999874322122
Q ss_pred eeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCC------CCceEEEcCCCCCCCCcccccEEEEecC
Q 004198 143 VVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQ------KPYVWQRLNPEGDRPSARMYATASARSD 216 (769)
Q Consensus 143 ~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~------~~~~W~~v~~~~~~P~~r~~hsa~~~~~ 216 (769)
+.. ....+..........++..++++...+....+++|++|+.+ ....+..+.... ... .......+
T Consensus 225 v~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~----~~~-~~~~s~dg 297 (710)
T 2xdw_A 225 CAE--FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF----EGE-YDYVTNEG 297 (710)
T ss_dssp EEC--CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS----SSC-EEEEEEET
T ss_pred Eec--cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC----CcE-EEEEeccC
Confidence 211 11122223333344444444444433322357899999875 322466664321 111 12233345
Q ss_pred CEEEEEcccCCCCCcccceEEEecCCCC--ceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEE
Q 004198 217 GMFLLCGGRDASGAPLADAYGLLMHRNG--QWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVL 293 (769)
Q Consensus 217 g~l~v~GG~~~~~~~l~d~~~ld~~~~~--~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~y 293 (769)
+.+|+.+..+. ....++.++..... .|+-..... +. ..-...+.. ++.+++...... ...++++
T Consensus 298 ~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~--~~-~~~~~~~~~~~~~lv~~~~~~g-------~~~l~~~ 364 (710)
T 2xdw_A 298 TVFTFKTNRHS---PNYRLINIDFTDPEESKWKVLVPEH--EK-DVLEWVACVRSNFLVLCYLHDV-------KNTLQLH 364 (710)
T ss_dssp TEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCC--SS-CEEEEEEEETTTEEEEEEEETT-------EEEEEEE
T ss_pred CEEEEEECCCC---CCCEEEEEeCCCCCcccceeccCCC--CC-CeEEEEEEEcCCEEEEEEEECC-------EEEEEEE
Confidence 67777654332 23568888876442 344332211 11 112234445 777777765322 3458999
Q ss_pred ECCCCc-EEec
Q 004198 294 DTAAGV-WLDR 303 (769)
Q Consensus 294 d~~t~~-W~~~ 303 (769)
|+.+++ .+.+
T Consensus 365 ~~~~g~~~~~l 375 (710)
T 2xdw_A 365 DLATGALLKIF 375 (710)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCCEEEec
Confidence 985554 3443
No 124
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=85.20 E-value=15 Score=42.32 Aligned_cols=244 Identities=11% Similarity=-0.014 Sum_probs=117.4
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcc-cccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSP-RAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~-R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
...+|+.+.....|+.+......... ........+ +++.+++.-.. .+.....++++|+.+.. .... ...+
T Consensus 93 ~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~-~G~~~~~i~v~dl~tg~--~~~~---~~~~ 166 (695)
T 2bkl_A 93 KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP-NAADEAVLHVIDVDSGE--WSKV---DVIE 166 (695)
T ss_dssp SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE-TTCSCCEEEEEETTTCC--BCSS---CCBS
T ss_pred EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC-CCCceEEEEEEECCCCC--CcCC---cccC
Confidence 46789999888889888643111000 011112222 44444433221 12224579999999843 3200 1222
Q ss_pred CCccccEEEEECCcEEEEEecCCCC--------CccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEE
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDGK--------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLC 222 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~~--------~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~ 222 (769)
.... ...+...++..++++..+.. .....+|++++.+..-+-..+.... ..+..........+|+.+++
T Consensus 167 ~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~--~~~~~~~~~~~SpDG~~l~~ 243 (695)
T 2bkl_A 167 GGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT--GDPTTFLQSDLSRDGKYLFV 243 (695)
T ss_dssp CCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC--CCTTCEEEEEECTTSCCEEE
T ss_pred cccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC--CCCEEEEEEEECCCCCEEEE
Confidence 2221 23333344455555555432 2356699999887621112222110 11223334455677766666
Q ss_pred cccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc---
Q 004198 223 GGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV--- 299 (769)
Q Consensus 223 GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~--- 299 (769)
...... ..+++|.++... +.+....... .. ....+..++.+|+...... ....++++|.++..
T Consensus 244 ~~~~~~--~~~~l~~~~~~~-~~~~~l~~~~----~~-~~~~~~~~g~l~~~s~~~~------~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 244 YILRGW--SENDVYWKRPGE-KDFRLLVKGV----GA-KYEVHAWKDRFYVLTDEGA------PRQRVFEVDPAKPARAS 309 (695)
T ss_dssp EEEETT--TEEEEEEECTTC-SSCEEEEECS----SC-CEEEEEETTEEEEEECTTC------TTCEEEEEBTTBCSGGG
T ss_pred EEeCCC--CceEEEEEcCCC-CceEEeecCC----Cc-eEEEEecCCcEEEEECCCC------CCCEEEEEeCCCCCccC
Confidence 544331 246788776542 2333332211 11 1122234566555533211 13569999987764
Q ss_pred EEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecCC
Q 004198 300 WLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAENS 361 (769)
Q Consensus 300 W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~~ 361 (769)
|+.+...... ... ......+++|++....++ ...+|.+++.
T Consensus 310 ~~~l~~~~~~-----------------~~l-~~~~~~~~~lv~~~~~dg---~~~l~~~~~~ 350 (695)
T 2bkl_A 310 WKEIVPEDSS-----------------ASL-LSVSIVGGHLSLEYLKDA---TSEVRVATLK 350 (695)
T ss_dssp CEEEECCCSS-----------------CEE-EEEEEETTEEEEEEEETT---EEEEEEEETT
T ss_pred CeEEecCCCC-----------------CeE-EEEEEECCEEEEEEEECC---EEEEEEEeCC
Confidence 8876543210 111 223334888888776555 3456776653
No 125
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=85.09 E-value=16 Score=37.47 Aligned_cols=199 Identities=11% Similarity=0.077 Sum_probs=84.8
Q ss_pred CcEEEEECC-CCcEEEec---CCCCCCcccc----cceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeee
Q 004198 75 NSVHLYDVL-TRKWTRIR---PAGEPPSPRA----AHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVV 145 (769)
Q Consensus 75 ~dv~~yD~~-~~~W~~l~---~~g~~P~~R~----~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~ 145 (769)
+.+..||+. +.+...+. ..+..|.+|. -++++.. ++.+|+.+.. .+.+++||+... .+...+..
T Consensus 108 ~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~------~~~v~~~~~~~~-g~~~~~~~ 180 (347)
T 3hfq_A 108 GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG------SDKVYVYNVSDA-GQLSEQSV 180 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT------TTEEEEEEECTT-SCEEEEEE
T ss_pred CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC------CCEEEEEEECCC-CcEEEeee
Confidence 457778874 33444332 2232232222 1222222 3456665432 246899998832 23333321
Q ss_pred cCCCCCCccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCC--CCCceEEEcCCCCCCCCc----ccccEEEEecCCE
Q 004198 146 QGQGPGPRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTA--QKPYVWQRLNPEGDRPSA----RMYATASARSDGM 218 (769)
Q Consensus 146 ~g~~p~~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~--~~~~~W~~v~~~~~~P~~----r~~hsa~~~~~g~ 218 (769)
....+...-. .+++. +++.+|+.+..+ +.+.+|+.. +. ++..+......|.. ..........+|+
T Consensus 181 ~~~~~g~~p~-~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 181 LTMEAGFGPR-HLVFSPDGQYAFLAGELS-----SQIASLKYDTQTG--AFTQLGIVKTIPADYTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp EECCTTCCEE-EEEECTTSSEEEEEETTT-----TEEEEEEEETTTT--EEEEEEEEESSCTTCCSCCEEEEEEECTTSC
T ss_pred EEcCCCCCCc-eEEECCCCCEEEEEeCCC-----CEEEEEEecCCCC--ceEEeeeeeecCCCCCCCCcceeEEECCCCC
Confidence 0111111111 23333 344577765433 344555544 44 55443221111211 1223344456775
Q ss_pred -EEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CC-EEEEEecccCCCCcccCCCcEEEE--
Q 004198 219 -FLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GA-RLHVTGGALRGGRAIEGEAAVAVL-- 293 (769)
Q Consensus 219 -l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~-~i~V~GG~~~~~~~~~~~~~v~~y-- 293 (769)
+|+.+..+ +.+..|+...++.++....... ....-..+++- ++ .||+.+. . .+.+.+|
T Consensus 253 ~l~v~~~~~------~~v~v~~~~~~g~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~-~--------~~~v~v~~~ 315 (347)
T 3hfq_A 253 FLYVSNRGY------NTLAVFAVTADGHLTLIQQIST--EGDFPRDFDLDPTEAFVVVVNQ-N--------TDNATLYAR 315 (347)
T ss_dssp EEEEEEETT------TEEEEEEECGGGCEEEEEEEEC--SSSCCCEEEECTTSSEEEEEET-T--------TTEEEEEEE
T ss_pred EEEEEeCCC------CEEEEEEECCCCcEEEeEEEec--CCCCcCeEEECCCCCEEEEEEc-C--------CCcEEEEEE
Confidence 66654321 3455566543433333321110 01111234443 44 4665543 1 1235555
Q ss_pred ECCCCcEEeccC
Q 004198 294 DTAAGVWLDRNG 305 (769)
Q Consensus 294 d~~t~~W~~~~~ 305 (769)
|.++++-+.+..
T Consensus 316 d~~tg~l~~~~~ 327 (347)
T 3hfq_A 316 DLTSGKLSLLQK 327 (347)
T ss_dssp CTTTCCEEEEEE
T ss_pred eCCCCeEEeccc
Confidence 778887776554
No 126
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=84.95 E-value=22 Score=40.98 Aligned_cols=109 Identities=10% Similarity=-0.014 Sum_probs=50.2
Q ss_pred ceeEEeCCC-CCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCC-C
Q 004198 180 DAWALDTAQ-KPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAP-S 257 (769)
Q Consensus 180 dv~~~d~~~-~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P-~ 257 (769)
.++++|+.+ . +-..+... .+.......... .||..++++..+.. ....+++.++..+. ............ .
T Consensus 264 ~l~~~d~~~~~--~~~~~~~~--~~~~~~~~~~~~-pDg~~l~~~~~~~~-~~~~~i~~~d~~~g-~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 264 KLGVISPAEQA--QTQWIDLG--KEQDIYLARVNW-RDPQHLSFQRQSRD-QKKLDLVEVTLASN-QQRVLAHETSPTWV 336 (741)
T ss_dssp EEEEECSSTTC--CCEEECCC--SCSSEEEEEEEE-EETTEEEEEEEETT-SSEEEEEEEETTTC-CEEEEEEEECSSCC
T ss_pred EEEEEECCCCC--ceEEecCC--CCcceEEEEEEe-CCCCEEEEEEeccc-CCeEEEEEEECCCC-ceEEEEEcCCCCcC
Confidence 788889887 6 32333211 011122233344 67665555443222 12467888887644 222111100000 0
Q ss_pred cccceEEEE-eCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEecc
Q 004198 258 PRYQHAAVF-VGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRN 304 (769)
Q Consensus 258 ~R~~hs~~~-~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~ 304 (769)
... ...++ -++++++.++..+ ...+|.+|.... ++.+.
T Consensus 337 ~~~-~~~~~spdg~~~~~~~~~g-------~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 337 PLH-NSLRFLDDGSILWSSERTG-------FQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CCC-SCCEECTTSCEEEEECTTS-------SCEEEEECSSSC-EEESC
T ss_pred CcC-CceEECCCCeEEEEecCCC-------ccEEEEEcCCCC-eeeee
Confidence 011 12223 2566666654322 346889987766 55543
No 127
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=84.64 E-value=39 Score=34.77 Aligned_cols=184 Identities=14% Similarity=0.195 Sum_probs=90.5
Q ss_pred EEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcccc
Q 004198 77 VHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGH 156 (769)
Q Consensus 77 v~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~h 156 (769)
+++-.-.-.+|+.+......+ .....+++..++.+|+.|.. ..+++ ......+|+.+......|.. -.
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~-~~~~~~i~~~~~~~~~~g~~-------g~i~~--S~DgG~tW~~~~~~~~~~~~--~~ 125 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHS-DYRFNSVSFQGNEGWIVGEP-------PIMLH--TTDGGQSWSQIPLDPKLPGS--PR 125 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCC-CCEEEEEEEETTEEEEEEET-------TEEEE--ESSTTSSCEECCCCTTCSSC--EE
T ss_pred EEEeCCCCCCCeECCCCCCCC-CccEEEEEecCCeEEEEECC-------CeEEE--ECCCCCCceECccccCCCCC--eE
Confidence 554322235799886432111 11223444456788887532 12333 22323579998532222322 23
Q ss_pred EEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceE
Q 004198 157 VMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAY 236 (769)
Q Consensus 157 s~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~ 236 (769)
.++...++.+|+.|.. + .+++-.-... +|+.+... .+...+.+....++.+++.|-. ..++
T Consensus 126 ~i~~~~~~~~~~~~~~-g-----~v~~S~DgG~--tW~~~~~~----~~~~~~~~~~~~~~~~~~~g~~-------G~~~ 186 (327)
T 2xbg_A 126 LIKALGNGSAEMITNV-G-----AIYRTKDSGK--NWQALVQE----AIGVMRNLNRSPSGEYVAVSSR-------GSFY 186 (327)
T ss_dssp EEEEEETTEEEEEETT-C-----CEEEESSTTS--SEEEEECS----CCCCEEEEEECTTSCEEEEETT-------SSEE
T ss_pred EEEEECCCCEEEEeCC-c-----cEEEEcCCCC--CCEEeecC----CCcceEEEEEcCCCcEEEEECC-------CcEE
Confidence 3444455577777642 1 2444322233 79998643 2233445555567777776521 2355
Q ss_pred EEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECC-CCcEEeccC
Q 004198 237 GLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTA-AGVWLDRNG 305 (769)
Q Consensus 237 ~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~-t~~W~~~~~ 305 (769)
+.......+|+-... +.+...+.+++. ++.+|+.+.. ..++..+.+ ...|+.+..
T Consensus 187 ~S~d~gG~tW~~~~~----~~~~~~~~~~~~~~g~~~~~~~~----------G~~~~s~~D~G~tW~~~~~ 243 (327)
T 2xbg_A 187 STWEPGQTAWEPHNR----TTSRRLHNMGFTPDGRLWMIVNG----------GKIAFSDPDNSENWGELLS 243 (327)
T ss_dssp EEECTTCSSCEEEEC----CSSSCEEEEEECTTSCEEEEETT----------TEEEEEETTEEEEECCCBC
T ss_pred EEeCCCCCceeECCC----CCCCccceeEECCCCCEEEEeCC----------ceEEEecCCCCCeeEeccC
Confidence 544321235654432 233344455443 5678777631 124454334 568988754
No 128
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=84.38 E-value=40 Score=34.68 Aligned_cols=176 Identities=14% Similarity=0.178 Sum_probs=86.4
Q ss_pred CCcEEEecCCCCCCcccccceEEE-ECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEEC
Q 004198 84 TRKWTRIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVS 162 (769)
Q Consensus 84 ~~~W~~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~ 162 (769)
-.+|+++......| -..+.++. -++.+|+.|.. + .+|+- .....+|+++.. +.+..-+.+....
T Consensus 108 G~tW~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~---g----~v~~S--~DgG~tW~~~~~----~~~~~~~~~~~~~ 172 (327)
T 2xbg_A 108 GQSWSQIPLDPKLP--GSPRLIKALGNGSAEMITNV---G----AIYRT--KDSGKNWQALVQ----EAIGVMRNLNRSP 172 (327)
T ss_dssp TSSCEECCCCTTCS--SCEEEEEEEETTEEEEEETT---C----CEEEE--SSTTSSEEEEEC----SCCCCEEEEEECT
T ss_pred CCCceECccccCCC--CCeEEEEEECCCCEEEEeCC---c----cEEEE--cCCCCCCEEeec----CCCcceEEEEEcC
Confidence 46799886432112 11233433 35688887642 1 24442 222356999853 2222334554445
Q ss_pred CcEEEEEecCCCCCccCceeEEeCC-CCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecC
Q 004198 163 QRYLVSVSGNDGKRVLSDAWALDTA-QKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMH 241 (769)
Q Consensus 163 ~~~l~v~GG~~~~~~~~dv~~~d~~-~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~ 241 (769)
++.++++|. . ..+++-+-. .. .|+.+.. +.....+.+....++.+|+.+.. + .++....+
T Consensus 173 ~~~~~~~g~-~-----G~~~~S~d~gG~--tW~~~~~----~~~~~~~~~~~~~~g~~~~~~~~---G----~~~~s~~D 233 (327)
T 2xbg_A 173 SGEYVAVSS-R-----GSFYSTWEPGQT--AWEPHNR----TTSRRLHNMGFTPDGRLWMIVNG---G----KIAFSDPD 233 (327)
T ss_dssp TSCEEEEET-T-----SSEEEEECTTCS--SCEEEEC----CSSSCEEEEEECTTSCEEEEETT---T----EEEEEETT
T ss_pred CCcEEEEEC-C-----CcEEEEeCCCCC--ceeECCC----CCCCccceeEECCCCCEEEEeCC---c----eEEEecCC
Confidence 556666653 2 234443221 34 7988853 23444455555567788877631 1 13333222
Q ss_pred CCCceEEEeCCCC-CCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccC
Q 004198 242 RNGQWEWTLAPGV-APSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 242 ~~~~W~W~~~~~~-~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 305 (769)
+--+|...... .+.....++.+.. ++.+|+.|+. ..+++-.=....|+.+..
T Consensus 234 --~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~----------g~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 234 --NSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA----------GALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp --EEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST----------TCEEEESSTTSSCEECGG
T ss_pred --CCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC----------CeEEEeCCCCcccEEcCc
Confidence 12256655322 1221122344443 5778888761 124333233578998764
No 129
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.25 E-value=8.7 Score=40.05 Aligned_cols=150 Identities=11% Similarity=0.039 Sum_probs=73.0
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CC-EEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GT-MVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~-~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
...++.+|+.+++...+... .....+....- ++ .|++... +........+|++|+.+ .++..+.. ..
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~----~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~--~~~~~l~~----~~ 235 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQD----TAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDG--SNVRKIKE----HA 235 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTS--CCCEESSC----CC
T ss_pred cceEEEEECCCCcEEeeccC----CcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCC--CceeEeec----cC
Confidence 45799999999888777532 11122222222 23 3444432 22222235799999877 44555521 11
Q ss_pred Cc-cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec-CCEEEEEcccCCC-
Q 004198 152 PR-YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-DGMFLLCGGRDAS- 228 (769)
Q Consensus 152 ~R-~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~-~g~l~v~GG~~~~- 228 (769)
+. .-.......++..+++...........++++|+.+. +...+... + . +...... ++.++++++....
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~---~--~--~~~~~s~~dg~~l~~~~~~~p~ 306 (396)
T 3c5m_A 236 EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL--ENEEVMVM---P--P--CSHLMSNFDGSLMVGDGCDAPV 306 (396)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC--CEEEEEEC---C--S--EEEEEECSSSSEEEEEECCC--
T ss_pred CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC--CeEEeeeC---C--C--CCCCccCCCCceEEEecCCcce
Confidence 11 111222333333333333322222234999999877 55554322 1 1 1133345 7777666543210
Q ss_pred ---------CCcccceEEEecCCC
Q 004198 229 ---------GAPLADAYGLLMHRN 243 (769)
Q Consensus 229 ---------~~~l~d~~~ld~~~~ 243 (769)
...-..++.++....
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 307 DVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp --------CCCCCCEEEEEETTTT
T ss_pred eeccccccccCCCCcEEEEecccC
Confidence 011356888887643
No 130
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=83.76 E-value=30 Score=35.81 Aligned_cols=106 Identities=12% Similarity=0.101 Sum_probs=50.4
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEEC-CcEEEEEecCCC-CCccCceeEEeCCCCCceEEEcCCCCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVS-QRYLVSVSGNDG-KRVLSDAWALDTAQKPYVWQRLNPEGDR 202 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~-~~~l~v~GG~~~-~~~~~dv~~~d~~~~~~~W~~v~~~~~~ 202 (769)
...++++|+.+. +-..+... .....+.. ... ++..+++..... ......+|.+|..+. ....+...
T Consensus 167 ~~~l~~~d~~~g--~~~~l~~~----~~~~~~~~-~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~--~~~~l~~~--- 234 (388)
T 3pe7_A 167 CCRLMRVDLKTG--ESTVILQE----NQWLGHPI-YRPYDDSTVAFCHEGPHDLVDARMWLINEDGT--NMRKVKTH--- 234 (388)
T ss_dssp CEEEEEEETTTC--CEEEEEEE----SSCEEEEE-EETTEEEEEEEEECSCTTTSSCSEEEEETTSC--CCEESCCC---
T ss_pred cceEEEEECCCC--ceEEeecC----CccccccE-ECCCCCCEEEEEEecCCCCCcceEEEEeCCCC--ceEEeeeC---
Confidence 367999999884 34444211 11222222 333 344444433322 223568999998776 44555432
Q ss_pred CCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCC
Q 004198 203 PSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN 243 (769)
Q Consensus 203 P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~ 243 (769)
.............+|..+++...... .....++.++..+.
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 235 AEGESCTHEFWVPDGSALVYVSYLKG-SPDRFIYSADPETL 274 (388)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETT-CCCEEEEEECTTTC
T ss_pred CCCcccccceECCCCCEEEEEecCCC-CCcceEEEEecCCC
Confidence 11111122234467654433322211 11124888887654
No 131
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=83.73 E-value=22 Score=37.30 Aligned_cols=95 Identities=12% Similarity=-0.007 Sum_probs=47.5
Q ss_pred CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCC
Q 004198 109 GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQ 188 (769)
Q Consensus 109 ~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~ 188 (769)
++..++.|+. ...+.+||+.+. +-.... ......-.+++...++.+++.|+.++ .+.+||+.+
T Consensus 108 ~~~~l~~~~~------dg~i~iwd~~~~--~~~~~~----~~h~~~v~~~~~~~~~~~l~s~s~d~-----~i~iwd~~~ 170 (420)
T 3vl1_A 108 QMRRFILGTT------EGDIKVLDSNFN--LQREID----QAHVSEITKLKFFPSGEALISSSQDM-----QLKIWSVKD 170 (420)
T ss_dssp SSCEEEEEET------TSCEEEECTTSC--EEEEET----TSSSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CCCEEEEEEC------CCCEEEEeCCCc--ceeeec----ccccCccEEEEECCCCCEEEEEeCCC-----eEEEEeCCC
Confidence 4556666654 235899998873 222221 11111222333444445667777554 488888876
Q ss_pred CCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 189 KPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 189 ~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
..... .+.. ....-.+.....++.+++.|+.+
T Consensus 171 ~~~~~-~~~~-----h~~~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 171 GSNPR-TLIG-----HRATVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp CCCCE-EEEC-----CSSCEEEEEEETTTTEEEEEETT
T ss_pred CcCce-EEcC-----CCCcEEEEEEcCCCCEEEEEcCC
Confidence 52221 1111 11112233444677777777654
No 132
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=83.40 E-value=35 Score=38.62 Aligned_cols=201 Identities=14% Similarity=0.060 Sum_probs=101.8
Q ss_pred CcEEEEECCC------CcEEEec-CCCCCCcccccceEEEECC-EEEEECccCCCCC-CcCcEEEEEcc-CCc-ceEEEe
Q 004198 75 NSVHLYDVLT------RKWTRIR-PAGEPPSPRAAHAAAAVGT-MVVFQGGIGPAGH-STDDLYVLDLT-NDK-FKWHRV 143 (769)
Q Consensus 75 ~dv~~yD~~~------~~W~~l~-~~g~~P~~R~~hs~~~~~~-~Iyv~GG~~~~~~-~~~dl~~~d~~-t~~-~~W~~~ 143 (769)
.+++.+|+.+ .+.+.+. .. + ......+..-++ .|++......... ...++|++|+. +.. .+..++
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~---~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l 236 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDA---H-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL 236 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSC---S-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecC---C-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe
Confidence 5788999888 6766665 32 1 111111222234 5555443221111 23579999998 431 134444
Q ss_pred eecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCC---CCccc-ccEEEEecCCEE
Q 004198 144 VVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDR---PSARM-YATASARSDGMF 219 (769)
Q Consensus 144 ~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~---P~~r~-~hsa~~~~~g~l 219 (769)
... . ...-.......++.+|+.+..++ ...+|.+|+.+. ++..+...... |.-.. ..+.....++.+
T Consensus 237 ~~~---~-~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~--~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~ 307 (662)
T 3azo_A 237 LGG---P-EEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATG--AATQLCRREEEFAGPLWTPGMRWFAPLANGLI 307 (662)
T ss_dssp EEE---T-TBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTC--CEEESSCCSSBSSCCCCSTTCCSEEECTTSCE
T ss_pred CCC---C-CceEcceEECCCCeEEEEECCCC---CeEEEEEECCCC--ceeecccccccccCccccccCceEeEeCCCEE
Confidence 321 0 11112332333445666555443 247999998777 78777543111 11000 112333356777
Q ss_pred EEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEE-EEeCCEEEEEecccCCCCcccCCCcEEEEECCCC
Q 004198 220 LLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAA-VFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAG 298 (769)
Q Consensus 220 ~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~-~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~ 298 (769)
++.+.. . ...+|.++.... ....+... .... ... ..-++.+++..+... ....+|.+|..++
T Consensus 308 ~~~~~~-~----~~~l~~~d~~~~---~~~~l~~~--~~~~-~~~~s~~~~~~~~~~~~~~------~~~~i~~~d~~~g 370 (662)
T 3azo_A 308 AVVHGK-G----AAVLGILDPESG---ELVDAAGP--WTEW-AATLTVSGTRAVGVAASPR------TAYEVVELDTVTG 370 (662)
T ss_dssp EEEEBS-S----SCEEEEEETTTT---EEEECCSS--CCEE-EEEEEEETTEEEEEEEETT------EEEEEEEEETTTC
T ss_pred EEEEEc-C----ccEEEEEECCCC---cEEEecCC--CCeE-EEEEecCCCEEEEEEcCCC------CCCEEEEEECCCC
Confidence 666543 2 357888887644 33444322 1111 222 344666666654322 1346899999998
Q ss_pred cEEeccC
Q 004198 299 VWLDRNG 305 (769)
Q Consensus 299 ~W~~~~~ 305 (769)
+.+.+..
T Consensus 371 ~~~~l~~ 377 (662)
T 3azo_A 371 RARTIGA 377 (662)
T ss_dssp CEEEEES
T ss_pred ceEEeec
Confidence 8877644
No 133
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=83.24 E-value=40 Score=38.11 Aligned_cols=206 Identities=13% Similarity=0.004 Sum_probs=96.0
Q ss_pred CcEEEEECC--C-CcEEEecCCCCC-CcccccceEEEECC-EEEEECccC---CCCCCcCcEEEEEccC------CcceE
Q 004198 75 NSVHLYDVL--T-RKWTRIRPAGEP-PSPRAAHAAAAVGT-MVVFQGGIG---PAGHSTDDLYVLDLTN------DKFKW 140 (769)
Q Consensus 75 ~dv~~yD~~--~-~~W~~l~~~g~~-P~~R~~hs~~~~~~-~Iyv~GG~~---~~~~~~~dl~~~d~~t------~~~~W 140 (769)
..+|.+|.. . ....+++..... ...+....+..-++ .|++..... .......++|++|+.+ .. .
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~ 179 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA--V 179 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG--S
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc--e
Confidence 468888876 3 566666542100 01122222222344 555443210 1112346799999877 33 3
Q ss_pred EEeeecCCCCCCccccEEEEECCcEEEEEecCCCCC---ccCceeEEeCC-CCCc-eEEEcCCCCCCCCcccccEEEEec
Q 004198 141 HRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR---VLSDAWALDTA-QKPY-VWQRLNPEGDRPSARMYATASARS 215 (769)
Q Consensus 141 ~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~---~~~dv~~~d~~-~~~~-~W~~v~~~~~~P~~r~~hsa~~~~ 215 (769)
..+.. .............++..+++...+... ...++|++|+. +... +...+... ............
T Consensus 180 ~~l~~----~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~----~~~~~~~~~~sp 251 (662)
T 3azo_A 180 RELSD----DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG----PEEAIAQAEWAP 251 (662)
T ss_dssp EESSC----SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE----TTBCEEEEEECT
T ss_pred eEEEe----cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC----CCceEcceEECC
Confidence 33310 111122222233333444444433211 13579999998 4410 22333211 011222333456
Q ss_pred CCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCC-----CCccc-ceEEEEe-CCEEEEEecccCCCCcccCCC
Q 004198 216 DGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVA-----PSPRY-QHAAVFV-GARLHVTGGALRGGRAIEGEA 288 (769)
Q Consensus 216 ~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~-----P~~R~-~hs~~~~-~~~i~V~GG~~~~~~~~~~~~ 288 (769)
||.+|+.+..++ ...+|.++.... ++..+.... |.-.. ....++. ++++++.+.. + ..
T Consensus 252 dg~l~~~~~~~~----~~~l~~~~~~~~---~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~-------~~ 316 (662)
T 3azo_A 252 DGSLIVATDRTG----WWNLHRVDPATG---AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G-------AA 316 (662)
T ss_dssp TSCEEEEECTTS----SCEEEEECTTTC---CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S-------SC
T ss_pred CCeEEEEECCCC----CeEEEEEECCCC---ceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C-------cc
Confidence 787776654432 246888887533 333332211 00000 1234444 6777776653 2 34
Q ss_pred cEEEEECCCCcEEeccC
Q 004198 289 AVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 289 ~v~~yd~~t~~W~~~~~ 305 (769)
.+|.+|.++++.+.+..
T Consensus 317 ~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 317 VLGILDPESGELVDAAG 333 (662)
T ss_dssp EEEEEETTTTEEEECCS
T ss_pred EEEEEECCCCcEEEecC
Confidence 68999998888776643
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=82.99 E-value=41 Score=33.72 Aligned_cols=196 Identities=11% Similarity=0.040 Sum_probs=86.4
Q ss_pred CcEEEEECC--CCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 75 NSVHLYDVL--TRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 75 ~dv~~yD~~--~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
+.+.+||+. +++++.+..... ...-..++.. ++.+|+.+.. ...+.+||+.+. .....+.....
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~-~~~~~~~~~~~-- 127 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESAL---PGSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDG-LPVGVVDVVEG-- 127 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEC---SSCCSEEEECTTSSEEEEEETT------TTEEEEEEEETT-EEEEEEEEECC--
T ss_pred CeEEEEEecCCCCceeecccccc---CCCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCC-ccccccccccC--
Confidence 457777776 778876643211 1111222222 3467665532 245888888521 12222221111
Q ss_pred CCccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCC-CCceEEEcC--CCCCCCCcccccEEEEecCCE-EEEEccc
Q 004198 151 GPRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQ-KPYVWQRLN--PEGDRPSARMYATASARSDGM-FLLCGGR 225 (769)
Q Consensus 151 ~~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~-~~~~W~~v~--~~~~~P~~r~~hsa~~~~~g~-l~v~GG~ 225 (769)
...-+.++.. .++.+|+.+..+ ..+.+||+.+ . +...+. ... .+....-..+....++. +|+.+..
T Consensus 128 -~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~pdg~~l~~~~~~ 198 (343)
T 1ri6_A 128 -LDGCHSANISPDNRTLWVPALKQ-----DRICLFTVSDDG--HLVAQDPAEVT-TVEGAGPRHMVFHPNEQYAYCVNEL 198 (343)
T ss_dssp -CTTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTTS--CEEEEEEEEEE-CSTTCCEEEEEECTTSSEEEEEETT
T ss_pred -CCCceEEEECCCCCEEEEecCCC-----CEEEEEEecCCC--ceeeecccccc-cCCCCCcceEEECCCCCEEEEEeCC
Confidence 1112333333 334676655322 3588888876 4 443221 000 01111112334445664 6665432
Q ss_pred CCCCCcccceEEEecCC-CCceEEEeCCCCCCC----cccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECC--
Q 004198 226 DASGAPLADAYGLLMHR-NGQWEWTLAPGVAPS----PRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTA-- 296 (769)
Q Consensus 226 ~~~~~~l~d~~~ld~~~-~~~W~W~~~~~~~P~----~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~-- 296 (769)
+ +.+..++... ++.+.........|. ......+++. +..+|+.+.. ...+.+||+.
T Consensus 199 ~------~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~---------~~~i~v~d~~~~ 263 (343)
T 1ri6_A 199 N------SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT---------ASLITVFSVSED 263 (343)
T ss_dssp T------TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT---------TTEEEEEEECTT
T ss_pred C------CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC---------CCEEEEEEEcCC
Confidence 1 3456666542 233322211111111 1111233333 3466665431 2357888887
Q ss_pred CCcEEeccCC
Q 004198 297 AGVWLDRNGL 306 (769)
Q Consensus 297 t~~W~~~~~~ 306 (769)
++.++.+...
T Consensus 264 ~~~~~~~~~~ 273 (343)
T 1ri6_A 264 GSVLSKEGFQ 273 (343)
T ss_dssp SCCEEEEEEE
T ss_pred CCceEEeeee
Confidence 5667666554
No 135
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=82.97 E-value=46 Score=34.29 Aligned_cols=113 Identities=5% Similarity=-0.069 Sum_probs=52.1
Q ss_pred cCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec-CCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCC
Q 004198 178 LSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-DGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAP 256 (769)
Q Consensus 178 ~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~-~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P 256 (769)
...++.+|+.+. +...+... ........... ++..+++............+|.++.... .+..+....+
T Consensus 167 ~~~l~~~d~~~g--~~~~~~~~-----~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~~~~l~~~~~ 236 (396)
T 3c5m_A 167 TCRLIKVDIETG--ELEVIHQD-----TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS---NVRKIKEHAE 236 (396)
T ss_dssp CEEEEEEETTTC--CEEEEEEE-----SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC---CCEESSCCCT
T ss_pred cceEEEEECCCC--cEEeeccC-----CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC---ceeEeeccCC
Confidence 357899999887 55554321 11122233334 4543333322211112357888887643 2233322111
Q ss_pred CcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccC
Q 004198 257 SPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 257 ~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 305 (769)
.... ...++. +++.+++.....+.. ...++++|+.+++.+.+..
T Consensus 237 ~~~~-~~~~~spdg~~l~~~~~~~~~~----~~~l~~~d~~~g~~~~l~~ 281 (396)
T 3c5m_A 237 GESC-THEFWIPDGSAMAYVSYFKGQT----DRVIYKANPETLENEEVMV 281 (396)
T ss_dssp TEEE-EEEEECTTSSCEEEEEEETTTC----CEEEEEECTTTCCEEEEEE
T ss_pred Cccc-cceEECCCCCEEEEEecCCCCc----cceEEEEECCCCCeEEeee
Confidence 1111 122222 455444433222111 2349999999887766543
No 136
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=82.56 E-value=12 Score=43.76 Aligned_cols=195 Identities=9% Similarity=0.082 Sum_probs=90.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--C--CEEEEECccCCCCCCcCcEEEEEccCCcceE-EEeeecCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--G--TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKW-HRVVVQGQG 149 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~--~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W-~~~~~~g~~ 149 (769)
+.+.++|+.+++|..+..... ....-.++.+ + +.+++.|+. ...+.+||+.+....- ..+. + .
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~---h~~~V~~v~~sp~~~~~~l~sgs~------dg~I~vwdl~~~~~~~~~~~~--~-~ 144 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAV---HSASVNSVQWAPHEYGPLLLVASS------DGKVSVVEFKENGTTSPIIID--A-H 144 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECC---CSSCEEEEEECCGGGCSEEEEEET------TSEEEEEECCSSSCCCCEEEE--C-C
T ss_pred CeEEEEECCCCcccccccccC---CCCCeEEEEECCCCCCCEEEEEeC------CCcEEEEEeecCCCcceeEee--c-C
Confidence 568889999998876654311 1111222222 2 455666653 2358888887642111 1110 1 1
Q ss_pred CCCccccEEEEEC-------------CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecC
Q 004198 150 PGPRYGHVMDLVS-------------QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSD 216 (769)
Q Consensus 150 p~~R~~hs~~~~~-------------~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~ 216 (769)
+.+ -.++.... ++.+++.|+.++ .+.+||+.+..-.+..+..... ....-.+.....+
T Consensus 145 ~~~--v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~ 215 (753)
T 3jro_A 145 AIG--VNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPT 215 (753)
T ss_dssp SSC--EEEEEECCCC---------CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCC
T ss_pred CCc--eEEEEecCcccccccccccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecC--CCCcEEEEEeccC
Confidence 111 11111111 246677777655 3677776554334444332210 1112233444466
Q ss_pred ---CEEEEEcccCCCCCcccceEEEecCCCC-ceEEEeCCCCCCCcccceEEEE-eCCEEEEEecccCCCCcccCCCcEE
Q 004198 217 ---GMFLLCGGRDASGAPLADAYGLLMHRNG-QWEWTLAPGVAPSPRYQHAAVF-VGARLHVTGGALRGGRAIEGEAAVA 291 (769)
Q Consensus 217 ---g~l~v~GG~~~~~~~l~d~~~ld~~~~~-~W~W~~~~~~~P~~R~~hs~~~-~~~~i~V~GG~~~~~~~~~~~~~v~ 291 (769)
+.+++.||.++. +..++..... .+........ .....-.++++ -++..++.||.. ..+.
T Consensus 216 ~~~~~~l~s~s~Dg~------I~iwd~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~l~s~s~D---------g~I~ 279 (753)
T 3jro_A 216 VLLRSYLASVSQDRT------CIIWTQDNEQGPWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGD---------NKVT 279 (753)
T ss_dssp CSSSEEEEEEESSSC------EEEEEESSSSSCCBCCBSSSS-CCSSCCCCEEECTTTCCEEEECSS---------SCEE
T ss_pred CCCCCEEEEEecCCE------EEEecCCCCCCcceeEEeccC-CCCCceEEEEEcCCCCEEEEEcCC---------CEEE
Confidence 788888886532 4444443320 1110111111 11111123333 266777777742 3478
Q ss_pred EEECCC-CcEEeccCC
Q 004198 292 VLDTAA-GVWLDRNGL 306 (769)
Q Consensus 292 ~yd~~t-~~W~~~~~~ 306 (769)
+||..+ ..|......
T Consensus 280 vwd~~~~~~~~~~~~~ 295 (753)
T 3jro_A 280 LWKENLEGKWEPAGEV 295 (753)
T ss_dssp CCBCCSSSCCBCCCCB
T ss_pred EEecCCCCCccccccc
Confidence 888874 567665554
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=82.08 E-value=36 Score=34.18 Aligned_cols=18 Identities=11% Similarity=0.161 Sum_probs=12.9
Q ss_pred EEEEECCCCcEEeccCCc
Q 004198 290 VAVLDTAAGVWLDRNGLV 307 (769)
Q Consensus 290 v~~yd~~t~~W~~~~~~~ 307 (769)
+|.+|+++++++.+...+
T Consensus 303 v~~~d~~~g~~~~~~~~~ 320 (343)
T 1ri6_A 303 VYEIVGEQGLLHEKGRYA 320 (343)
T ss_dssp EEEEETTTTEEEEEEEEE
T ss_pred EEEEcCCCceeeEccccc
Confidence 555588888888876653
No 138
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=82.08 E-value=47 Score=33.78 Aligned_cols=149 Identities=12% Similarity=0.133 Sum_probs=74.6
Q ss_pred CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 110 TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 110 ~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
+.+++.|+. ...+.++|+.+.. -......+ +. .-.+++...++.+++.|+.++ .+.+||..+.
T Consensus 92 ~~~l~s~s~------D~~i~lWd~~~~~--~~~~~~~~--~~--~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~ 154 (321)
T 3ow8_A 92 LPIAASSSL------DAHIRLWDLENGK--QIKSIDAG--PV--DAWTLAFSPDSQYLATGTHVG-----KVNIFGVESG 154 (321)
T ss_dssp SSEEEEEET------TSEEEEEETTTTE--EEEEEECC--TT--CCCCEEECTTSSEEEEECTTS-----EEEEEETTTC
T ss_pred CCEEEEEeC------CCcEEEEECCCCC--EEEEEeCC--Cc--cEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCC
Confidence 345555553 2458899998843 22221111 11 112344444556677776543 4778888776
Q ss_pred CceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-C
Q 004198 190 PYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-G 268 (769)
Q Consensus 190 ~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~ 268 (769)
...+.... ......+.....++.+++.|+.++ .+..+|..+. .-.. ...+. .... .++++. +
T Consensus 155 ~~~~~~~~------~~~~v~~~~~spdg~~lasg~~dg------~i~iwd~~~~-~~~~-~~~~h--~~~v-~~l~~spd 217 (321)
T 3ow8_A 155 KKEYSLDT------RGKFILSIAYSPDGKYLASGAIDG------IINIFDIATG-KLLH-TLEGH--AMPI-RSLTFSPD 217 (321)
T ss_dssp SEEEEEEC------SSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTT-EEEE-EECCC--SSCC-CEEEECTT
T ss_pred ceeEEecC------CCceEEEEEECCCCCEEEEEcCCC------eEEEEECCCC-cEEE-EEccc--CCce-eEEEEcCC
Confidence 32332211 111223344457788888887643 3556666543 1111 11111 0011 123332 6
Q ss_pred CEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 269 ARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 269 ~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
+.+++.|+.. ..+.+||..+....
T Consensus 218 ~~~l~s~s~d---------g~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 218 SQLLVTASDD---------GYIKIYDVQHANLA 241 (321)
T ss_dssp SCEEEEECTT---------SCEEEEETTTCCEE
T ss_pred CCEEEEEcCC---------CeEEEEECCCccee
Confidence 6777777642 34889998776543
No 139
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=81.97 E-value=50 Score=34.03 Aligned_cols=201 Identities=11% Similarity=-0.013 Sum_probs=94.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECC-EEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGT-MVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~-~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
.++|.+|+.+.+-..+.... .......+..-++ .|++... ...++++|+.+.. -..+. ..+...
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~---~~~~~~~~~spdg~~l~~~~~-------~~~l~~~d~~~g~--~~~~~---~~~~~~ 124 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGR---GDNTFGGFLSPDDDALFYVKD-------GRNLMRVDLATLE--ENVVY---QVPAEW 124 (388)
T ss_dssp CEEEEEETTTCEEEECCCSS---CBCSSSCEECTTSSEEEEEET-------TTEEEEEETTTCC--EEEEE---ECCTTE
T ss_pred ceEEEEeCCCCceEEeeeCC---CCCccceEEcCCCCEEEEEeC-------CCeEEEEECCCCc--ceeee---echhhc
Confidence 47999999999888776431 1111112222234 5555442 1469999998843 33332 222222
Q ss_pred cccE-EEEE-CCcEEEEEec--CC--------------CCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec
Q 004198 154 YGHV-MDLV-SQRYLVSVSG--ND--------------GKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS 215 (769)
Q Consensus 154 ~~hs-~~~~-~~~~l~v~GG--~~--------------~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~ 215 (769)
.... .+.. ++..++.+-- .+ .......++.+|+.+. +-..+... .... .......
T Consensus 125 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~----~~~~-~~~~~sp 197 (388)
T 3pe7_A 125 VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG--ESTVILQE----NQWL-GHPIYRP 197 (388)
T ss_dssp EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC--CEEEEEEE----SSCE-EEEEEET
T ss_pred ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC--ceEEeecC----Cccc-cccEECC
Confidence 2111 1112 2223322110 00 0112367999999887 43444321 1122 2333456
Q ss_pred -CCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCE-EEEEecccCCCCcccCCCcEEE
Q 004198 216 -DGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GAR-LHVTGGALRGGRAIEGEAAVAV 292 (769)
Q Consensus 216 -~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~-i~V~GG~~~~~~~~~~~~~v~~ 292 (769)
++..+++............+|.++.... ....+.......... ..+.. +++ |+......+ .. ...+++
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~---~~~~l~~~~~~~~~~-~~~~spdg~~l~~~~~~~~-~~----~~~l~~ 268 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGT---NMRKVKTHAEGESCT-HEFWVPDGSALVYVSYLKG-SP----DRFIYS 268 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSC---CCEESCCCCTTEEEE-EEEECTTSSCEEEEEEETT-CC----CEEEEE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCC---ceEEeeeCCCCcccc-cceECCCCCEEEEEecCCC-CC----cceEEE
Confidence 7766655443322223467888887643 222222211101111 12222 454 433332211 11 124999
Q ss_pred EECCCCcEEeccCC
Q 004198 293 LDTAAGVWLDRNGL 306 (769)
Q Consensus 293 yd~~t~~W~~~~~~ 306 (769)
+|+++++-+.+...
T Consensus 269 ~d~~~g~~~~l~~~ 282 (388)
T 3pe7_A 269 ADPETLENRQLTSM 282 (388)
T ss_dssp ECTTTCCEEEEEEE
T ss_pred EecCCCceEEEEcC
Confidence 99999886665443
No 140
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=81.88 E-value=44 Score=33.35 Aligned_cols=179 Identities=15% Similarity=0.154 Sum_probs=83.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+..||+.+.+-...-.. ....-.++.+ ++..++.|+. ...+.+||+.+.. -..... .. .
T Consensus 87 ~~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~------d~~i~iwd~~~~~--~~~~~~--~~--~ 149 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKG-----HSNYVFCCNFNPQSNLIVSGSF------DESVRIWDVKTGK--CLKTLP--AH--S 149 (312)
T ss_dssp SEEEEEETTTCCEEEEEEC-----CSSCEEEEEECSSSSEEEEEET------TSCEEEEETTTCC--EEEEEC--CC--S
T ss_pred CEEEEEECCCCcEEEEEcC-----CCCCEEEEEEcCCCCEEEEEeC------CCcEEEEECCCCE--EEEEec--CC--C
Confidence 4688888887654322111 0011111222 3345555553 2348999998743 222211 10 1
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEE-cCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQR-LNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP 231 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~-v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~ 231 (769)
..-.++....++.+++.|+.++ .+.+||+.+. +... +... ............++.+++.|+.+
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~d----- 213 (312)
T 4ery_A 150 DPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASG--QCLKTLIDD----DNPPVSFVKFSPNGKYILAATLD----- 213 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC--CEEEEECCS----SCCCEEEEEECTTSSEEEEEETT-----
T ss_pred CcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--ceeeEEecc----CCCceEEEEECCCCCEEEEEcCC-----
Confidence 1111232334446677777654 4788898776 3222 1111 11111223344677777777654
Q ss_pred ccceEEEecCCCCceEEEeCCCCCCCcccceEEEE--eCCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 232 LADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVF--VGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 232 l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~--~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
..+..|+..+. .-... ..+.. .......+.. .++.+++.|+.. ..+.+||..+.+
T Consensus 214 -~~i~iwd~~~~-~~~~~-~~~~~-~~~~~~~~~~~~~~~~~l~sg~~d---------g~i~vwd~~~~~ 270 (312)
T 4ery_A 214 -NTLKLWDYSKG-KCLKT-YTGHK-NEKYCIFANFSVTGGKWIVSGSED---------NLVYIWNLQTKE 270 (312)
T ss_dssp -TEEEEEETTTT-EEEEE-ECSSC-CSSSCCCEEEECSSSCEEEECCTT---------SCEEEEETTTCC
T ss_pred -CeEEEEECCCC-cEEEE-EEecC-CceEEEEEEEEeCCCcEEEEECCC---------CEEEEEECCCch
Confidence 24556666543 11111 11111 1111111222 356677777632 348899998765
No 141
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=81.83 E-value=54 Score=34.31 Aligned_cols=181 Identities=14% Similarity=0.097 Sum_probs=89.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++.||..+++...+.... ....-.++.+ ++..++.|+. ...+.+||+.+.. ..... ...
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~----~~~~v~~v~~s~~~~~l~~~~~------dg~i~iwd~~~~~--~~~~~---~~~-- 175 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD----ESTYVASVKWSHDGSFLSVGLG------NGLVDIYDVESQT--KLRTM---AGH-- 175 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC----TTCCEEEEEECTTSSEEEEEET------TSCEEEEETTTCC--EEEEE---CCC--
T ss_pred CeEEEeeCCCCcEeEeeecC----CCCCEEEEEECCCCCEEEEECC------CCeEEEEECcCCe--EEEEe---cCC--
Confidence 57999999998877654331 1111122222 3445555553 2358999998743 32221 111
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
......+.+.+ .+++.|+.++ .+.++|+......-..+... ...-.+.....++.+++.|+.++
T Consensus 176 ~~~v~~~~~~~-~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~s~~~d~----- 239 (401)
T 4aez_A 176 QARVGCLSWNR-HVLSSGSRSG-----AIHHHDVRIANHQIGTLQGH-----SSEVCGLAWRSDGLQLASGGNDN----- 239 (401)
T ss_dssp SSCEEEEEEET-TEEEEEETTS-----EEEEEETTSSSCEEEEEECC-----SSCEEEEEECTTSSEEEEEETTS-----
T ss_pred CCceEEEEECC-CEEEEEcCCC-----CEEEEecccCcceeeEEcCC-----CCCeeEEEEcCCCCEEEEEeCCC-----
Confidence 11122333444 4666666553 57888887431122222211 11123334446777777777543
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
.+..+|..+. .-...... ....-.++++. +..+++.||... ...+.+||+.+.+-.
T Consensus 240 -~v~iwd~~~~-~~~~~~~~----~~~~v~~~~~~p~~~~ll~~~~gs~-------d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 240 -VVQIWDARSS-IPKFTKTN----HNAAVKAVAWCPWQSNLLATGGGTM-------DKQIHFWNAATGARV 297 (401)
T ss_dssp -CEEEEETTCS-SEEEEECC----CSSCCCEEEECTTSTTEEEEECCTT-------TCEEEEEETTTCCEE
T ss_pred -eEEEccCCCC-CccEEecC----CcceEEEEEECCCCCCEEEEecCCC-------CCEEEEEECCCCCEE
Confidence 3556666532 11222111 11111233333 456777775221 235899999876543
No 142
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.80 E-value=83 Score=36.45 Aligned_cols=191 Identities=8% Similarity=0.012 Sum_probs=92.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCC--cccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCC----cceEE---Eee
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPP--SPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTND----KFKWH---RVV 144 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P--~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~----~~~W~---~~~ 144 (769)
+-+++||+.+++++......... ....-++++.. ++.||+.. . . .-+++||..+. ...+. ...
T Consensus 392 ~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT-~-~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~ 464 (758)
T 3ott_A 392 GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIST-C-L-----GGIFVVDKHKLMQSTSGQYIAEQNYS 464 (758)
T ss_dssp TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEE-S-S-----SCEEEEEHHHHHHCCSSEEECSEEEC
T ss_pred CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEE-C-C-----CceEEEccccccccCCcceecccccc
Confidence 34778999988888764211111 11111233322 35888842 1 1 12888887531 01121 111
Q ss_pred ecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcc
Q 004198 145 VQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGG 224 (769)
Q Consensus 145 ~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG 224 (769)
....++.. .-.++....++.|+++||.. +-+++||+.++ ++..+.... .+......+...-.+|.|++..
T Consensus 465 ~~~~l~~~-~i~~i~~d~~g~lWi~~~t~-----~Gl~~~d~~~~--~~~~~~~~~-~~~~~~~~~i~~d~~g~lWigt- 534 (758)
T 3ott_A 465 VHNGLSGM-FINQIIPDNEGNVWVLLYNN-----KGIDKINPRTR--EVTKLFADE-LTGEKSPNYLLCDEDGLLWVGF- 534 (758)
T ss_dssp GGGTCSCS-CEEEEEECTTSCEEEEETTC-----SSEEEEETTTT--EEEEECTTT-SCGGGCEEEEEECTTSCEEEEE-
T ss_pred cccccccc-eeeeEEEcCCCCEEEEccCC-----CCcEEEeCCCC--ceEEecCCC-cCCCcccceEEECCCCCEEEEe-
Confidence 11112221 12233344556788866643 34899999888 777764321 1111122333344678888743
Q ss_pred cCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEec
Q 004198 225 RDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303 (769)
Q Consensus 225 ~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~ 303 (769)
. .-+.+|+..+. +++.....+. |. ..-.+++.-++.|++... ..+.+||+++.+....
T Consensus 535 ~-------~Gl~~~~~~~~-~~~~~~~~gl-~~-~~i~~i~~~~g~lWi~t~-----------~Gl~~~~~~~~~~~~~ 592 (758)
T 3ott_A 535 H-------GGVMRINPKDE-SQQSISFGSF-SN-NEILSMTCVKNSIWVSTT-----------NGLWIIDRKTMDARQQ 592 (758)
T ss_dssp T-------TEEEEECC--C-CCCBCCCCC-----CCEEEEEEETTEEEEEES-----------SCEEEEETTTCCEEEC
T ss_pred c-------CceEEEecCCC-ceEEecccCC-Cc-cceEEEEECCCCEEEECC-----------CCeEEEcCCCceeEEe
Confidence 1 23677776543 2211111122 21 122333334777877542 3489999999887654
No 143
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=81.74 E-value=49 Score=33.78 Aligned_cols=179 Identities=16% Similarity=0.094 Sum_probs=81.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeee-cCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVV-QGQGPG 151 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~-~g~~p~ 151 (769)
+.+.++|..+.+-...-.. ......++.+ ++..++.||. ...+.+||+.+.......... .+. .
T Consensus 77 g~v~iWd~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~~~------d~~v~iw~~~~~~~~~~~~~~~~~h--~ 143 (340)
T 1got_B 77 GKLIIWDSYTTNKVHAIPL-----RSSWVMTCAYAPSGNYVACGGL------DNICSIYNLKTREGNVRVSRELAGH--T 143 (340)
T ss_dssp TEEEEEETTTCCEEEEEEC-----SSSCEEEEEECTTSSEEEEEET------TCEEEEEETTTCSBSCEEEEEEECC--S
T ss_pred CcEEEEECCCCCcceEeec-----CCccEEEEEECCCCCEEEEEeC------CCeEEEEECccCCCcceeEEEecCC--C
Confidence 4688889887654322111 0111112222 3455556654 245788888763221111110 010 0
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCc
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAP 231 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~ 231 (769)
. .-..+....++. ++.|+.++ .+.++|+.+. +-...-.. ....-.+.....++.+++.|+.++
T Consensus 144 ~-~v~~~~~~~~~~-l~s~s~d~-----~i~~wd~~~~--~~~~~~~~----h~~~v~~~~~~~~~~~l~sg~~d~---- 206 (340)
T 1got_B 144 G-YLSCCRFLDDNQ-IVTSSGDT-----TCALWDIETG--QQTTTFTG----HTGDVMSLSLAPDTRLFVSGACDA---- 206 (340)
T ss_dssp S-CEEEEEEEETTE-EEEEETTS-----CEEEEETTTT--EEEEEECC----CSSCEEEEEECTTSSEEEEEETTS----
T ss_pred c-cEEEEEECCCCc-EEEEECCC-----cEEEEECCCC--cEEEEEcC----CCCceEEEEECCCCCEEEEEeCCC----
Confidence 1 111222334445 45555443 4778898876 32221111 111123344456777888887653
Q ss_pred ccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 232 LADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 232 l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
.+..+|..+.. -... ..+. ...-.++++. ++..++.|+.. ..+.+||+.+.+
T Consensus 207 --~v~~wd~~~~~-~~~~-~~~h---~~~v~~v~~~p~~~~l~s~s~d---------~~v~iwd~~~~~ 259 (340)
T 1got_B 207 --SAKLWDVREGM-CRQT-FTGH---ESDINAICFFPNGNAFATGSDD---------ATCRLFDLRADQ 259 (340)
T ss_dssp --CEEEEETTTCS-EEEE-ECCC---SSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTTE
T ss_pred --cEEEEECCCCe-eEEE-EcCC---cCCEEEEEEcCCCCEEEEEcCC---------CcEEEEECCCCc
Confidence 34455554321 1111 1110 0111223332 56677777742 348899987764
No 144
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=81.64 E-value=35 Score=35.37 Aligned_cols=107 Identities=9% Similarity=0.043 Sum_probs=51.0
Q ss_pred EECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEe
Q 004198 160 LVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLL 239 (769)
Q Consensus 160 ~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld 239 (769)
...+.. ++.|+.+ ..+.+||+.+....... .. ....-.+.....++.+++.|+.++ .+..++
T Consensus 214 ~~~~~~-~~~~~~~-----g~i~~~d~~~~~~~~~~-~~-----~~~~i~~~~~~~~~~~l~~~~~d~------~i~i~d 275 (425)
T 1r5m_A 214 WVDDDK-FVIPGPK-----GAIFVYQITEKTPTGKL-IG-----HHGPISVLEFNDTNKLLLSASDDG------TLRIWH 275 (425)
T ss_dssp EEETTE-EEEECGG-----GCEEEEETTCSSCSEEE-CC-----CSSCEEEEEEETTTTEEEEEETTS------CEEEEC
T ss_pred EcCCCE-EEEEcCC-----CeEEEEEcCCCceeeee-cc-----CCCceEEEEECCCCCEEEEEcCCC------EEEEEE
Confidence 334434 5555543 35888998775322221 11 111123344456676777776432 355555
Q ss_pred cCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 240 MHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 240 ~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
..... ...... + ....-.++++. ++ +++.|+. ...+.+||+.+.+
T Consensus 276 ~~~~~-~~~~~~-~---~~~~i~~~~~~~~~-~l~~~~~---------d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 276 GGNGN-SQNCFY-G---HSQSIVSASWVGDD-KVISCSM---------DGSVRLWSLKQNT 321 (425)
T ss_dssp SSSBS-CSEEEC-C---CSSCEEEEEEETTT-EEEEEET---------TSEEEEEETTTTE
T ss_pred CCCCc-cceEec-C---CCccEEEEEECCCC-EEEEEeC---------CCcEEEEECCCCc
Confidence 54321 111111 0 11111233343 45 6666653 2358999997765
No 145
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=81.27 E-value=84 Score=36.19 Aligned_cols=121 Identities=21% Similarity=0.225 Sum_probs=68.0
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++.+|..+++ |+.-.............+-+..++.||+..+... ......++.||..+.+..|+.-...+. |..
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~~~~~~-p~~ 208 (689)
T 1yiq_A 131 GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAE-FGVRGYVTAYDAETGKEAWRFYTVPGD-PKL 208 (689)
T ss_dssp SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEESSCCC-TTS
T ss_pred CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCc-cCCCCEEEEEECCCCcEEEEecccCCC-ccc
Confidence 579999999876 8865431101111222334556888887543211 113457999999998888986532111 110
Q ss_pred c----------------------cc----cEEEEE-CCcEEEEEecCC-------------CCCccCceeEEeCCCCCce
Q 004198 153 R----------------------YG----HVMDLV-SQRYLVSVSGND-------------GKRVLSDAWALDTAQKPYV 192 (769)
Q Consensus 153 R----------------------~~----hs~~~~-~~~~l~v~GG~~-------------~~~~~~dv~~~d~~~~~~~ 192 (769)
. .+ .++++. ..+.+|+..|+. ...+...++.+|.++....
T Consensus 209 ~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~ 288 (689)
T 1yiq_A 209 PPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYV 288 (689)
T ss_dssp CCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEE
T ss_pred ccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCcee
Confidence 0 00 123232 344666654431 1223456999999999889
Q ss_pred EEEcC
Q 004198 193 WQRLN 197 (769)
Q Consensus 193 W~~v~ 197 (769)
|..-.
T Consensus 289 W~~~~ 293 (689)
T 1yiq_A 289 WHYQT 293 (689)
T ss_dssp EEEES
T ss_pred Eeeec
Confidence 98754
No 146
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=81.05 E-value=1.2 Score=50.48 Aligned_cols=66 Identities=20% Similarity=0.199 Sum_probs=41.8
Q ss_pred CEEEEccCCCCH--------------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCCh-----HHHHHH
Q 004198 582 PVKVFGDLHGQF--------------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHS-----LETITL 636 (769)
Q Consensus 582 ~i~viGDiHG~~--------------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s-----~e~l~l 636 (769)
.|+.++|+||.+ ..+..+++........ .-+|+.||.++..+.+ ..++.+
T Consensus 27 ~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~-----~l~l~~GD~~~g~~~~~~~~g~~~~~~ 101 (546)
T 4h2g_A 27 TILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPN-----VLLLDAGDQYQGTIWFTVYKGAEVAHF 101 (546)
T ss_dssp EEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSS-----EEEEECSCCSSSSHHHHHHTTHHHHHH
T ss_pred EEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCC-----EEEEECCccCCCchhhhhhCChHHHHH
Confidence 389999999864 4455566554321111 1466699999987532 445666
Q ss_pred HHHhhhcCCCceEEecCCcch
Q 004198 637 LLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 637 l~~lk~~~p~~v~llrGNHE~ 657 (769)
|..+. --++..||||.
T Consensus 102 ln~lg-----~d~~~~GNHEf 117 (546)
T 4h2g_A 102 MNALR-----YDAMALGNHEF 117 (546)
T ss_dssp HHHHT-----CSEEECCGGGG
T ss_pred HHhcC-----CcEEeccCccc
Confidence 66653 22677899995
No 147
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=80.71 E-value=22 Score=41.40 Aligned_cols=179 Identities=10% Similarity=0.046 Sum_probs=82.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEE-ECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+.+||..+++....-.. ...+ . .+++. -++..++.|+. ...+.+||..+. +...... + ...
T Consensus 35 g~v~iwd~~~~~~~~~~~~--~~~~-v-~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~--~~~~~~~-~---~~~ 98 (814)
T 3mkq_A 35 GRVEIWNYETQVEVRSIQV--TETP-V-RAGKFIARKNWIIVGSD------DFRIRVFNYNTG--EKVVDFE-A---HPD 98 (814)
T ss_dssp SEEEEEETTTTEEEEEEEC--CSSC-E-EEEEEEGGGTEEEEEET------TSEEEEEETTTC--CEEEEEE-C---CSS
T ss_pred CEEEEEECCCCceEEEEec--CCCc-E-EEEEEeCCCCEEEEEeC------CCeEEEEECCCC--cEEEEEe-c---CCC
Confidence 5788999988765432211 0111 1 11222 23444555553 245899999884 3333221 1 111
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec-CCEEEEEcccCCCCCcc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-DGMFLLCGGRDASGAPL 232 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~-~g~l~v~GG~~~~~~~l 232 (769)
.-.+++...++..++.|+.++ .+.+||+.++. .....-.. ....-.++.... ++.+++.|+.++
T Consensus 99 ~v~~~~~s~~~~~l~~~~~dg-----~i~vw~~~~~~-~~~~~~~~----~~~~v~~~~~~p~~~~~l~~~~~dg----- 163 (814)
T 3mkq_A 99 YIRSIAVHPTKPYVLSGSDDL-----TVKLWNWENNW-ALEQTFEG----HEHFVMCVAFNPKDPSTFASGCLDR----- 163 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTS-----EEEEEEGGGTS-EEEEEEEC----CSSCEEEEEEETTEEEEEEEEETTS-----
T ss_pred CEEEEEEeCCCCEEEEEcCCC-----EEEEEECCCCc-eEEEEEcC----CCCcEEEEEEEcCCCCEEEEEeCCC-----
Confidence 112333333444556666543 47778876641 22111111 111112233334 567777776542
Q ss_pred cceEEEecCCCC-ceEEEeCCCCCCCcccceEEEEe---CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 233 ADAYGLLMHRNG-QWEWTLAPGVAPSPRYQHAAVFV---GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 233 ~d~~~ld~~~~~-~W~W~~~~~~~P~~R~~hs~~~~---~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
.+..++..... ....... ....-..+++. ++..++.|+.. ..+.+||..+.+
T Consensus 164 -~v~vwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~l~~~~~d---------g~i~~~d~~~~~ 219 (814)
T 3mkq_A 164 -TVKVWSLGQSTPNFTLTTG-----QERGVNYVDYYPLPDKPYMITASDD---------LTIKIWDYQTKS 219 (814)
T ss_dssp -EEEEEETTCSSCSEEEECC-----CTTCCCEEEECCSTTCCEEEEECTT---------SEEEEEETTTTE
T ss_pred -eEEEEECCCCcceeEEecC-----CCCCEEEEEEEECCCCCEEEEEeCC---------CEEEEEECCCCc
Confidence 35556654321 1111111 10111223332 56677777632 358899987765
No 148
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=80.59 E-value=29 Score=33.22 Aligned_cols=156 Identities=14% Similarity=0.115 Sum_probs=80.2
Q ss_pred eEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeec---CCCCCCccccEEEEE-CCcEEEEEecCCCCCccC
Q 004198 104 AAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ---GQGPGPRYGHVMDLV-SQRYLVSVSGNDGKRVLS 179 (769)
Q Consensus 104 s~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~---g~~p~~R~~hs~~~~-~~~~l~v~GG~~~~~~~~ 179 (769)
+++.+.+.+|+|=| +-+|+++.............. ..+|.. .. ++... .++.+|+|-| +
T Consensus 11 Ai~~~~g~~yfFkg--------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-ID-Aa~~~~~~~~~yfFkG-------~ 73 (195)
T 1itv_A 11 AIAEIGNQLYLFKD--------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-LD-SVFEEPLSKKLFFFSG-------R 73 (195)
T ss_dssp EEEEETTEEEEEET--------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CS-EEEECTTTCCEEEEET-------T
T ss_pred EEEEeCCEEEEEEC--------CEEEEEECCccccCCCcEEhhhccCCCCCC-cc-EEEEECCCCeEEEEeC-------C
Confidence 45557888999876 237888765410112222111 123432 11 22233 2457888877 4
Q ss_pred ceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCC---ceEEE---eCCC
Q 004198 180 DAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNG---QWEWT---LAPG 253 (769)
Q Consensus 180 dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~---~W~W~---~~~~ 253 (769)
.+|+|+..+-. .=..+...|-+.....-.+|....++++|+|-| +..|+|+..+.. ..-+. ..++
T Consensus 74 ~yw~~~~~~~~-~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--------~~ywr~d~~~~~~~~gyPr~i~~~w~G 144 (195)
T 1itv_A 74 QVWVYTGASVL-GPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--------RRLWRFDVKAQMVDPRSASEVDRMFPG 144 (195)
T ss_dssp EEEEEETTEEE-EEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--------TEEEEEETTTTEECGGGCEEHHHHSTT
T ss_pred EEEEEcCCccC-CCEEeeecccCCCccceeEEEEcCCCeEEEEeC--------CEEEEEeCCcccccCCCccChhhcCCC
Confidence 67888754320 112233222211112234444466889999976 357888875430 00000 0112
Q ss_pred CCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 254 VAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 254 ~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
. |.--.++...++.+|+|-| +..|.||..+.+
T Consensus 145 v---p~~idaa~~~~g~~Yffkg-----------~~y~~~~~~~~~ 176 (195)
T 1itv_A 145 V---PLDTHDVFQFREKAYFCQD-----------RFYWRVSSRSEL 176 (195)
T ss_dssp S---CSSCSEEEEETTEEEEEET-----------TEEEEEECCTTC
T ss_pred C---CCCCCEEEEeCCeEEEEeC-----------CEEEEEECCccE
Confidence 2 1222344455799999977 347899987764
No 149
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=80.50 E-value=15 Score=38.04 Aligned_cols=133 Identities=14% Similarity=0.148 Sum_probs=56.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+.+||+.++.|+.+.... .....-.++.+ ++..++.|+. ...+.+||+.+.. .|...... ....
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~s~------d~~v~vwd~~~~~-~~~~~~~~--~~~~ 100 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFS---DHDKIVTCVDWAPKSNRIVTCSQ------DRNAYVYEKRPDG-TWKQTLVL--LRLN 100 (377)
T ss_dssp SCBCEEEEETTEEEECCCBC---CCSSCEEEEEECTTTCCEEEEET------TSSEEEC-------CCCCEEEC--CCCS
T ss_pred CEEEEEEccCCceEEEEEEe---cCCceEEEEEEeCCCCEEEEEeC------CCeEEEEEcCCCC-ceeeeeEe--cccC
Confidence 46778888888888765441 11111122222 3455555653 2348888888732 13333210 1111
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
..-.++....+..+++.|+.++ .+.+||+.+.. .|..+..... +....-.+.....++.+++.|+.+
T Consensus 101 ~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~-~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 101 RAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQEN-DWWVSKHLKR-PLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp SCEEEEECCTTSSCCEEEESSS-----CEEECCC------CCCCEEECS-SCCSCEEEEEECTTSSEEEEEESS
T ss_pred CceEEEEECCCCCEEEEEecCC-----eEEEEEECCcc-cceeeeEeec-ccCCCeEEEEEcCCCCEEEEEeCC
Confidence 1112232333445666676554 36677776541 1211211100 112222334445677777877764
No 150
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=80.26 E-value=64 Score=34.17 Aligned_cols=91 Identities=13% Similarity=0.118 Sum_probs=47.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
+.+.+||..+.+-...-.. ....-.+...++.+++.|+.+ ..+.++|+.+.. -.... .....
T Consensus 153 g~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~~~~~l~sg~~d------g~i~vwd~~~~~--~~~~~-----~~h~~ 214 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILTG-----HTGSVLCLQYDERVIITGSSD------STVRVWDVNTGE--MLNTL-----IHHCE 214 (435)
T ss_dssp SCEEEEESSSCCEEEEECC-----CSSCEEEEECCSSEEEEEETT------SCEEEEESSSCC--EEEEE-----CCCCS
T ss_pred CeEEEEeCCCCeEEEEEcC-----CCCcEEEEEECCCEEEEEcCC------CeEEEEECCCCc--EEEEE-----cCCCC
Confidence 5788999988764433211 111122333356666666642 348999998843 22221 11111
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
.-....+.+ .+++.|+.++ .+.+||+.+.
T Consensus 215 ~v~~l~~~~-~~l~s~s~dg-----~i~vwd~~~~ 243 (435)
T 1p22_A 215 AVLHLRFNN-GMMVTCSKDR-----SIAVWDMASP 243 (435)
T ss_dssp CEEEEECCT-TEEEEEETTS-----CEEEEECSSS
T ss_pred cEEEEEEcC-CEEEEeeCCC-----cEEEEeCCCC
Confidence 223333444 4566666554 4777888765
No 151
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=80.04 E-value=1.6 Score=49.51 Aligned_cols=66 Identities=21% Similarity=0.212 Sum_probs=41.0
Q ss_pred CEEEEccCCCCH-----------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCC-----hHHHHHHHHH
Q 004198 582 PVKVFGDLHGQF-----------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQH-----SLETITLLLA 639 (769)
Q Consensus 582 ~i~viGDiHG~~-----------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~-----s~e~l~ll~~ 639 (769)
.|+.++|+||.+ ..+..+++.......+ .-+|..||++++.+. ...++..|..
T Consensus 31 ~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~-----~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 31 TLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKN-----PLFLDAGDVFQGTLYFNQYRGLADRYFMHR 105 (552)
T ss_dssp EEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSS-----EEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCC-----EEEEeCCCCCCCcHHHHHhCCcHHHHHHHh
Confidence 388999999863 4566666554311111 135668999997653 2345555555
Q ss_pred hhhcCCCceEEecCCcch
Q 004198 640 LKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 640 lk~~~p~~v~llrGNHE~ 657 (769)
+. --++..||||.
T Consensus 106 lg-----~d~~~lGNHEf 118 (552)
T 2z1a_A 106 LR-----YRAMALGNHEF 118 (552)
T ss_dssp TT-----CCEEECCGGGG
T ss_pred cC-----CCccccccccc
Confidence 43 23677899996
No 152
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=80.01 E-value=74 Score=34.77 Aligned_cols=58 Identities=12% Similarity=0.105 Sum_probs=39.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCC
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHS 124 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~ 124 (769)
++++|+|-| +..|+||..+++...-.-.| . +. --++....+.+|+|=|
T Consensus 158 ~~~~yfFkG---------------------~~yw~yd~~~~~~~~~~w~g-i--~~-iDAA~~~~g~~YfFkG------- 205 (460)
T 1qhu_A 158 DEGILFFQG---------------------NRKWFWDLTTGTKKERSWPA-V--GN-CTSALRWLGRYYCFQG------- 205 (460)
T ss_dssp SSEEEEEET---------------------TEEEEEETTTTEEEEECCTT-S--CC-CSEEEEETTEEEEEET-------
T ss_pred CCeEEEEec---------------------ccEEEEecccceeecccCCC-C--Cc-cchheeeCCceEEEEC-------
Confidence 567888888 36899999988766433333 2 23 2455555789999987
Q ss_pred cCcEEEEEccC
Q 004198 125 TDDLYVLDLTN 135 (769)
Q Consensus 125 ~~dl~~~d~~t 135 (769)
+..|+||..+
T Consensus 206 -~~y~rfd~~~ 215 (460)
T 1qhu_A 206 -NQFLRFNPVS 215 (460)
T ss_dssp -TEEEEECTTT
T ss_pred -CEEEEEcCcc
Confidence 3478888754
No 153
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=79.46 E-value=34 Score=39.45 Aligned_cols=201 Identities=12% Similarity=0.026 Sum_probs=101.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCC------CCCCcCcEEEEEccCCcceEEEeeecCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP------AGHSTDDLYVLDLTNDKFKWHRVVVQGQ 148 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~------~~~~~~dl~~~d~~t~~~~W~~~~~~g~ 148 (769)
.+++++|+.+++....... ..+....+-+-++.||+.--... .......+|++++.+...+=..+. .
T Consensus 155 ~~i~v~dl~tg~~~~~~~~----~~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~---~ 227 (693)
T 3iuj_A 155 REIHLMDVESKQPLETPLK----DVKFSGISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVF---G 227 (693)
T ss_dssp EEEEEEETTTCSEEEEEEE----EEESCCCEEETTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEE---S
T ss_pred EEEEEEECCCCCCCccccC----CceeccEEEeCCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEE---e
Confidence 5799999999997765321 12222333332335555432211 012346699999877432112221 1
Q ss_pred CCC--CccccEEEEEC-CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEccc
Q 004198 149 GPG--PRYGHVMDLVS-QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGR 225 (769)
Q Consensus 149 ~p~--~R~~hs~~~~~-~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~ 225 (769)
.+. +.......... ++.|++...... ..+++|++|+.+..-.|..+... .. .........++.+|+....
T Consensus 228 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~i~~~d~~~~~~~~~~l~~~----~~-~~~~~~~~~g~~l~~~t~~ 300 (693)
T 3iuj_A 228 AIPAQHHRYVGATVTEDDRFLLISAANST--SGNRLYVKDLSQENAPLLTVQGD----LD-ADVSLVDNKGSTLYLLTNR 300 (693)
T ss_dssp CSGGGCCSEEEEEECTTSCEEEEEEESSS--SCCEEEEEETTSTTCCCEEEECS----SS-SCEEEEEEETTEEEEEECT
T ss_pred cCCCCCeEEEEEEEcCCCCEEEEEEccCC--CCcEEEEEECCCCCCceEEEeCC----CC-ceEEEEeccCCEEEEEECC
Confidence 111 22222332333 334444433222 23689999987653356666532 11 1122233456788887654
Q ss_pred CCCCCcccceEEEecCCCCc--eEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEec
Q 004198 226 DASGAPLADAYGLLMHRNGQ--WEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303 (769)
Q Consensus 226 ~~~~~~l~d~~~ld~~~~~~--W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~ 303 (769)
+. ....++..+...... |+ .+........ +....++.|++...... ...++++|.++...+.+
T Consensus 301 ~~---~~~~l~~~d~~~~~~~~~~--~l~~~~~~~~---~~s~~g~~lv~~~~~~g-------~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 301 DA---PNRRLVTVDAANPGPAHWR--DLIPERQQVL---TVHSGSGYLFAEYMVDA-------TARVEQFDYEGKRVREV 365 (693)
T ss_dssp TC---TTCEEEEEETTSCCGGGCE--EEECCCSSCE---EEEEETTEEEEEEEETT-------EEEEEEECTTSCEEEEE
T ss_pred CC---CCCEEEEEeCCCCCccccE--EEecCCCCEE---EEEEECCEEEEEEEECC-------eeEEEEEECCCCeeEEe
Confidence 32 235678888765433 44 2222211211 44455777766543221 34589999987665555
Q ss_pred c
Q 004198 304 N 304 (769)
Q Consensus 304 ~ 304 (769)
.
T Consensus 366 ~ 366 (693)
T 3iuj_A 366 A 366 (693)
T ss_dssp C
T ss_pred e
Confidence 3
No 154
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=79.40 E-value=54 Score=32.84 Aligned_cols=185 Identities=6% Similarity=-0.034 Sum_probs=87.8
Q ss_pred CcEEEEECCCCcE-EEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 75 NSVHLYDVLTRKW-TRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 75 ~dv~~yD~~~~~W-~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
+.++.+|+.+++. ......+.. ++ ++++.. ++.+| .+... + ....++++|+.+. +.......+..
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~~--~~--~~~~~s~dg~~l~-~~~~~-~--~~~~i~v~d~~~~--~~~~~~~~~~~-- 129 (331)
T 3u4y_A 62 QTLVQIETQLEPPKVVAIQEGQS--SM--ADVDITPDDQFAV-TVTGL-N--HPFNMQSYSFLKN--KFISTIPIPYD-- 129 (331)
T ss_dssp CEEEEEECSSSSCEEEEEEECSS--CC--CCEEECTTSSEEE-ECCCS-S--SSCEEEEEETTTT--EEEEEEECCTT--
T ss_pred CeEEEEECCCCceeEEecccCCC--Cc--cceEECCCCCEEE-EecCC-C--CcccEEEEECCCC--CeEEEEECCCC--
Confidence 5799999998874 322222211 11 212222 44677 33221 0 1136999999883 34333222221
Q ss_pred CccccEEEEECC-cEEEEEecCCCCCccCc-eeEEeCCCCCce----EEEcCCCCCCCCcccccEEEEecCCE-EEEEcc
Q 004198 152 PRYGHVMDLVSQ-RYLVSVSGNDGKRVLSD-AWALDTAQKPYV----WQRLNPEGDRPSARMYATASARSDGM-FLLCGG 224 (769)
Q Consensus 152 ~R~~hs~~~~~~-~~l~v~GG~~~~~~~~d-v~~~d~~~~~~~----W~~v~~~~~~P~~r~~hsa~~~~~g~-l~v~GG 224 (769)
-+.+++..+ +.+|+.+..+ +. +++|++...... ...+ . ....-+......++. +|+.+.
T Consensus 130 ---~~~~~~spdg~~l~~~~~~~-----~~~i~~~~~~~~g~~~~~~~~~~-~-----~~~~~~~~~~spdg~~l~v~~~ 195 (331)
T 3u4y_A 130 ---AVGIAISPNGNGLILIDRSS-----ANTVRRFKIDADGVLFDTGQEFI-S-----GGTRPFNITFTPDGNFAFVANL 195 (331)
T ss_dssp ---EEEEEECTTSSCEEEEEETT-----TTEEEEEEECTTCCEEEEEEEEE-C-----SSSSEEEEEECTTSSEEEEEET
T ss_pred ---ccceEECCCCCEEEEEecCC-----CceEEEEEECCCCcEeecCCccc-c-----CCCCccceEECCCCCEEEEEeC
Confidence 244444433 3577665432 24 666665433111 1111 1 111123444556764 666543
Q ss_pred cCCCCCcccceEEEecCCCCc---eEEEeCCCCCCCcccceEEEEe-C-CEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 225 RDASGAPLADAYGLLMHRNGQ---WEWTLAPGVAPSPRYQHAAVFV-G-ARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 225 ~~~~~~~l~d~~~ld~~~~~~---W~W~~~~~~~P~~R~~hs~~~~-~-~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
. -+.+..++..+... ..-... + ..-..+++. + ..+|+..+. .+.+.++|+++++
T Consensus 196 ~------~~~v~v~d~~~~~~~~~~~~~~~-~-----~~~~~~~~spdg~~l~v~~~~---------~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 196 I------GNSIGILETQNPENITLLNAVGT-N-----NLPGTIVVSRDGSTVYVLTES---------TVDVFNFNQLSGT 254 (331)
T ss_dssp T------TTEEEEEECSSTTSCEEEEEEEC-S-----SCCCCEEECTTSSEEEEECSS---------EEEEEEEETTTTE
T ss_pred C------CCeEEEEECCCCcccceeeeccC-C-----CCCceEEECCCCCEEEEEEcC---------CCEEEEEECCCCc
Confidence 2 23567777654321 111111 1 111233443 3 446665431 2458999999988
Q ss_pred EEeccCC
Q 004198 300 WLDRNGL 306 (769)
Q Consensus 300 W~~~~~~ 306 (769)
.+.+...
T Consensus 255 ~~~~~~~ 261 (331)
T 3u4y_A 255 LSFVKSF 261 (331)
T ss_dssp EEEEEEE
T ss_pred eeeeccc
Confidence 7665544
No 155
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=79.28 E-value=24 Score=36.43 Aligned_cols=97 Identities=12% Similarity=0.095 Sum_probs=37.7
Q ss_pred CcEEEEECCCCc-EEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 75 NSVHLYDVLTRK-WTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 75 ~dv~~yD~~~~~-W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
+.+.+||+.+.+ |..+..... ....-.++.+ ++..++.|+. ...+.+||+.+.. .|..+... ..+.
T Consensus 77 ~~v~vwd~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~-~~~~~~~~-~~~h 145 (377)
T 3dwl_C 77 RNAYVYEKRPDGTWKQTLVLLR---LNRAATFVRWSPNEDKFAVGSG------ARVISVCYFEQEN-DWWVSKHL-KRPL 145 (377)
T ss_dssp SSEEEC------CCCCEEECCC---CSSCEEEEECCTTSSCCEEEES------SSCEEECCC------CCCCEEE-CSSC
T ss_pred CeEEEEEcCCCCceeeeeEecc---cCCceEEEEECCCCCEEEEEec------CCeEEEEEECCcc-cceeeeEe-eccc
Confidence 468888888776 543322210 0111112222 3445555553 2347888887632 12111110 1111
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCC
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTA 187 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~ 187 (769)
...-.++....++.+++.|+.++ .+.+||+.
T Consensus 146 ~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~ 176 (377)
T 3dwl_C 146 RSTILSLDWHPNNVLLAAGCADR-----KAYVLSAY 176 (377)
T ss_dssp CSCEEEEEECTTSSEEEEEESSS-----CEEEEEEC
T ss_pred CCCeEEEEEcCCCCEEEEEeCCC-----EEEEEEEE
Confidence 22222333444456777777654 36677764
No 156
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=79.27 E-value=33 Score=39.82 Aligned_cols=204 Identities=12% Similarity=0.061 Sum_probs=96.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCC-------CCCCcCcEEEEEccCCcceEEEeeecC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGP-------AGHSTDDLYVLDLTNDKFKWHRVVVQG 147 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~-------~~~~~~dl~~~d~~t~~~~W~~~~~~g 147 (769)
..++++|+.+++....... ..+....+-.-++.|++..-..+ .......+|++++.+....=..+. .
T Consensus 189 ~~i~v~dl~tg~~~~~~~~----~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~--~ 262 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELK----WVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVF--A 262 (741)
T ss_dssp EEEEEEETTTCCEEEEEEE----EEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEE--C
T ss_pred EEEEEEECCCCCCCCccCC----CceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEe--c
Confidence 4799999999988654211 11111111111334444332111 111245689999877432112221 1
Q ss_pred CCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCce-EEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 148 QGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYV-WQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 148 ~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~-W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
....+..........++..+++.........+++|++|+.+.... |..+.... ... ...+...++.+|+....+
T Consensus 263 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~----~~~-~~~~~~dg~~l~~~s~~~ 337 (741)
T 1yr2_A 263 TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL----KAQ-WDFVDGVGDQLWFVSGDG 337 (741)
T ss_dssp CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS----SSC-EEEEEEETTEEEEEECTT
T ss_pred cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC----Cce-EEEEeccCCEEEEEECCC
Confidence 112222233333344444444444333224678999998764223 66664321 111 122223455666654332
Q ss_pred CCCCcccceEEEecCCC-CceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEec
Q 004198 227 ASGAPLADAYGLLMHRN-GQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303 (769)
Q Consensus 227 ~~~~~l~d~~~ld~~~~-~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~ 303 (769)
.....++.++.... ..|+ .+...... .. ......++.+++...... ...+++++...+.-+.+
T Consensus 338 ---~~~~~l~~~d~~~~~~~~~--~l~~~~~~-~l-~~~~~~~~~lv~~~~~dg-------~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 338 ---APLKKIVRVDLSGSTPRFD--TVVPESKD-NL-ESVGIAGNRLFASYIHDA-------KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp ---CTTCEEEEEECSSSSCEEE--EEECCCSS-EE-EEEEEEBTEEEEEEEETT-------EEEEEEEETTSCEEEEC
T ss_pred ---CCCCEEEEEeCCCCccccE--EEecCCCC-eE-EEEEEECCEEEEEEEECC-------EEEEEEEeCCCCceeec
Confidence 12356888887653 2444 33222111 11 233444788877765332 34588999765544444
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=79.19 E-value=56 Score=32.83 Aligned_cols=104 Identities=18% Similarity=0.049 Sum_probs=48.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCc--ccccceEEEE--CCEEEEECcc--CCCCC---CcCcEEEEEccCCcceEEEeee
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPS--PRAAHAAAAV--GTMVVFQGGI--GPAGH---STDDLYVLDLTNDKFKWHRVVV 145 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~--~R~~hs~~~~--~~~Iyv~GG~--~~~~~---~~~dl~~~d~~t~~~~W~~~~~ 145 (769)
+.+++||+.+++.......+..|. ...-++++.. ++.+|+.+.. ..... ....+++||+.+....- .+..
T Consensus 65 ~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~ 143 (349)
T 1jmx_B 65 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAK-PVRT 143 (349)
T ss_dssp TEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBC-CSEE
T ss_pred CcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccc-eeee
Confidence 579999999887553322211111 1112333332 3466665521 00000 12579999988732110 0000
Q ss_pred cCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCC
Q 004198 146 QGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP 190 (769)
Q Consensus 146 ~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~ 190 (769)
...| +.-++++...++.+|+.++ +++++|+.+..
T Consensus 144 -~~~~--~~~~~~~~s~dg~l~~~~~--------~i~~~d~~~~~ 177 (349)
T 1jmx_B 144 -FPMP--RQVYLMRAADDGSLYVAGP--------DIYKMDVKTGK 177 (349)
T ss_dssp -EECC--SSCCCEEECTTSCEEEESS--------SEEEECTTTCC
T ss_pred -ccCC--CcccceeECCCCcEEEccC--------cEEEEeCCCCc
Confidence 1112 2223343444445666332 38889988763
No 158
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=79.11 E-value=38 Score=35.89 Aligned_cols=124 Identities=9% Similarity=0.097 Sum_probs=57.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC-
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG- 151 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~- 151 (769)
+.+.++|..+.+....-. + . ...-.++.+ ++.+++.|+.+ ..+.+||+.+. +-... ...
T Consensus 130 g~i~vwd~~~~~~~~~l~-~--h--~~~V~~v~~~~~~~~l~sgs~D------~~i~iwd~~~~--~~~~~-----~~~h 191 (410)
T 1vyh_C 130 ATIKVWDYETGDFERTLK-G--H--TDSVQDISFDHSGKLLASCSAD------MTIKLWDFQGF--ECIRT-----MHGH 191 (410)
T ss_dssp SCEEEEETTTCCCCEEEC-C--C--SSCEEEEEECTTSSEEEEEETT------SCCCEEETTSS--CEEEC-----CCCC
T ss_pred CeEEEEECCCCcEEEEEe-c--c--CCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCC--ceeEE-----EcCC
Confidence 568889988775432211 1 0 001112222 34566666642 33677888762 22211 111
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCC
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDA 227 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~ 227 (769)
...-.++....++.+++.|+.++ .+.+||+.+.. .-..+... .....+.....++.+++.|+.++
T Consensus 192 ~~~V~~v~~~p~~~~l~s~s~D~-----~i~~wd~~~~~-~~~~~~~h-----~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 192 DHNVSSVSIMPNGDHIVSASRDK-----TIKMWEVQTGY-CVKTFTGH-----REWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTCC-EEEEEECC-----SSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCc-EEEEEeCC-----CccEEEEEECCCCCEEEEEcCCC
Confidence 11112333333445667777654 47788887761 11122111 11112233346777777777643
No 159
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=78.84 E-value=58 Score=32.83 Aligned_cols=145 Identities=7% Similarity=-0.034 Sum_probs=73.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+++||+.++++..+... ....-++++.. ++.+|+.+..+ ......+++||+.+.. ...+.. ......
T Consensus 66 ~~i~~~d~~~~~~~~~~~~----~~~~~~~i~~~~dg~l~v~~~~~--~~~~~~i~~~d~~~~~--~~~~~~--~~~~~~ 135 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVS----HKANPAAIKIHKDGRLFVCYLGD--FKSTGGIFAATENGDN--LQDIIE--DLSTAY 135 (333)
T ss_dssp CEEEEECTTTCCEEEEEEC----SSSSEEEEEECTTSCEEEEECTT--SSSCCEEEEECTTSCS--CEEEEC--SSSSCC
T ss_pred CEEEEEeCCCCcEEEEeeC----CCCCcceEEECCCCcEEEEeCCC--CCCCceEEEEeCCCCE--EEEEEc--cCccCC
Confidence 4699999999988776421 11122333332 45777765321 1122569999988743 332221 111112
Q ss_pred cccEEEEECCcEEEEEecCC-CCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEcccCCCCCc
Q 004198 154 YGHVMDLVSQRYLVSVSGND-GKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGGRDASGAP 231 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~-~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG~~~~~~~ 231 (769)
.-..++...++.+|+..... .......+|++|+.+. +...+... .......+...++ .+|+....
T Consensus 136 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~-----~~~~~~i~~~~dg~~l~v~~~~------ 202 (333)
T 2dg1_A 136 CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR--TVTPIIQN-----ISVANGIALSTDEKVLWVTETT------ 202 (333)
T ss_dssp CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC--CEEEEEEE-----ESSEEEEEECTTSSEEEEEEGG------
T ss_pred cccceEECCCCCEEEEeccccccCCCceEEEEeCCCC--EEEEeecC-----CCcccceEECCCCCEEEEEeCC------
Confidence 22234344455677654321 1122457999998765 44443211 0111233344565 57775422
Q ss_pred ccceEEEecCC
Q 004198 232 LADAYGLLMHR 242 (769)
Q Consensus 232 l~d~~~ld~~~ 242 (769)
.+.++.|+...
T Consensus 203 ~~~i~~~d~~~ 213 (333)
T 2dg1_A 203 ANRLHRIALED 213 (333)
T ss_dssp GTEEEEEEECT
T ss_pred CCeEEEEEecC
Confidence 24577787753
No 160
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=78.78 E-value=1.1e+02 Score=35.79 Aligned_cols=194 Identities=7% Similarity=-0.071 Sum_probs=92.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCccccc---ceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC-
Q 004198 76 SVHLYDVLTRKWTRIRPAGEPPSPRAA---HAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP- 150 (769)
Q Consensus 76 dv~~yD~~~~~W~~l~~~g~~P~~R~~---hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p- 150 (769)
-+++||+.++++..+......+..... .+++.. ++.||+.. .. .-+++|+..+ ..+..+.......
T Consensus 283 Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt--~~-----~Gl~~~~~~~--~~~~~~~~~~~~~~ 353 (795)
T 4a2l_A 283 DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGT--YF-----GGLNYYHPIR--NRFKNIRNIPYKNS 353 (795)
T ss_dssp CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEE--SS-----SCEEEECGGG--GSSEEECCCTTSSS
T ss_pred hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEE--CC-----CCeEEeCCCc--ccceEEcCCCCCCC
Confidence 467889988888887543211111111 122222 35777732 11 2278888877 3455443211100
Q ss_pred -CCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCC----CcccccEEEEecCCE-EEEEcc
Q 004198 151 -GPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRP----SARMYATASARSDGM-FLLCGG 224 (769)
Q Consensus 151 -~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P----~~r~~hsa~~~~~g~-l~v~GG 224 (769)
....-.+++...++.|++. ... .-+.+||..++ ++.........+ ....-.+.+...++. |++..
T Consensus 354 l~~~~V~~i~~d~~g~lWiG-t~~-----~Gl~~~~~~~~--~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt- 424 (795)
T 4a2l_A 354 LSDNVVSCIVEDKDKNLWIG-TND-----GGLNLYNPITQ--RFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT- 424 (795)
T ss_dssp CSCSSEEEEEECTTSCEEEE-ESS-----SCEEEECTTTC--CEEEECCC------CCSCSCEEEEEEETTTTEEEEEE-
T ss_pred CCCCeeEEEEECCCCCEEEE-ECC-----CCeEEEcCCCC--cEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe-
Confidence 1111223333345577773 221 23888999887 565554221001 112223334445677 77631
Q ss_pred cCCCCCcccceEEEecCCCCceEEEeCC-CCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 225 RDASGAPLADAYGLLMHRNGQWEWTLAP-GVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 225 ~~~~~~~l~d~~~ld~~~~~~W~W~~~~-~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
. -.-++.|+..+. +++..... ...+.... .+.+.- ++.|+|-.. ..+++||+.+++|+.
T Consensus 425 ~------~~Gl~~~d~~~~-~~~~~~~~~~~l~~~~v-~~i~~d~~g~lwigt~-----------~Gl~~~~~~~~~~~~ 485 (795)
T 4a2l_A 425 H------AGGLSILHRNSG-QVENFNQRNSQLVNENV-YAILPDGEGNLWLGTL-----------SALVRFNPEQRSFTT 485 (795)
T ss_dssp T------TTEEEEEETTTC-CEEEECTTTSCCSCSCE-EEEEECSSSCEEEEES-----------SCEEEEETTTTEEEE
T ss_pred C------cCceeEEeCCCC-cEEEeecCCCCcCCCee-EEEEECCCCCEEEEec-----------CceeEEeCCCCeEEE
Confidence 1 134677887654 22222211 11111111 122221 466666421 238999999999988
Q ss_pred ccCC
Q 004198 303 RNGL 306 (769)
Q Consensus 303 ~~~~ 306 (769)
+...
T Consensus 486 ~~~~ 489 (795)
T 4a2l_A 486 IEKE 489 (795)
T ss_dssp CCBC
T ss_pred cccc
Confidence 7543
No 161
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=78.67 E-value=55 Score=32.47 Aligned_cols=189 Identities=8% Similarity=-0.045 Sum_probs=92.9
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
.+.+++||+.++ .+.+.... ..-++++.- ++.+|+.... ...+++||+.+. +...+.........
T Consensus 49 ~~~i~~~~~~~~-~~~~~~~~-----~~~~~l~~~~dg~l~v~~~~------~~~i~~~d~~~g--~~~~~~~~~~~~~~ 114 (296)
T 3e5z_A 49 QNRTWAWSDDGQ-LSPEMHPS-----HHQNGHCLNKQGHLIACSHG------LRRLERQREPGG--EWESIADSFEGKKL 114 (296)
T ss_dssp GTEEEEEETTSC-EEEEESSC-----SSEEEEEECTTCCEEEEETT------TTEEEEECSTTC--CEEEEECEETTEEC
T ss_pred CCEEEEEECCCC-eEEEECCC-----CCcceeeECCCCcEEEEecC------CCeEEEEcCCCC--cEEEEeeccCCCCC
Confidence 357999999988 66664321 112333332 4567765421 245899999773 35544211011111
Q ss_pred ccccEEEEECCcEEEEE----ecCCC--------CCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEE
Q 004198 153 RYGHVMDLVSQRYLVSV----SGNDG--------KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFL 220 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~----GG~~~--------~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~ 220 (769)
..-..+++..++.+|+. |.... ......+|+|++. . +...+.... ..-...+...++.++
T Consensus 115 ~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g--~~~~~~~~~-----~~~~gi~~s~dg~~l 186 (296)
T 3e5z_A 115 NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G--TLSAPIRDR-----VKPNGLAFLPSGNLL 186 (296)
T ss_dssp CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S--CEEEEECCC-----SSEEEEEECTTSCEE
T ss_pred CCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C--CEEEeecCC-----CCCccEEECCCCCEE
Confidence 11123444555677775 33110 1113479999987 4 344443221 111334445667666
Q ss_pred EEcccCCCCCcccceEEEecCCCCce-EEEeCCCCCCCcccceEEEE-eCCEEEEEecccCCCCcccCCCcEEEEECCCC
Q 004198 221 LCGGRDASGAPLADAYGLLMHRNGQW-EWTLAPGVAPSPRYQHAAVF-VGARLHVTGGALRGGRAIEGEAAVAVLDTAAG 298 (769)
Q Consensus 221 v~GG~~~~~~~l~d~~~ld~~~~~~W-~W~~~~~~~P~~R~~hs~~~-~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~ 298 (769)
+.... .+.++.|+...++.. .-...-.. ... .-.++++ -++.+||..+ +.+.+||++..
T Consensus 187 v~~~~------~~~i~~~~~~~~g~~~~~~~~~~~-~~~-~p~~i~~d~~G~l~v~~~-----------~~v~~~~~~g~ 247 (296)
T 3e5z_A 187 VSDTG------DNATHRYCLNARGETEYQGVHFTV-EPG-KTDGLRVDAGGLIWASAG-----------DGVHVLTPDGD 247 (296)
T ss_dssp EEETT------TTEEEEEEECSSSCEEEEEEEECC-SSS-CCCSEEEBTTSCEEEEET-----------TEEEEECTTSC
T ss_pred EEeCC------CCeEEEEEECCCCcCcCCCeEeeC-CCC-CCCeEEECCCCCEEEEcC-----------CeEEEECCCCC
Confidence 44321 246778877644444 11111110 111 1123333 3677888751 24899999865
Q ss_pred cEEec
Q 004198 299 VWLDR 303 (769)
Q Consensus 299 ~W~~~ 303 (769)
....+
T Consensus 248 ~~~~~ 252 (296)
T 3e5z_A 248 ELGRV 252 (296)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 54444
No 162
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=78.52 E-value=93 Score=35.03 Aligned_cols=69 Identities=10% Similarity=0.004 Sum_probs=38.6
Q ss_pred CCcCcEEEEEccCCcceEEEeeecCCCCCC--ccccEEEEE---CCc--EEEEEecCCCCCccCceeEEeCCCCCceEEE
Q 004198 123 HSTDDLYVLDLTNDKFKWHRVVVQGQGPGP--RYGHVMDLV---SQR--YLVSVSGNDGKRVLSDAWALDTAQKPYVWQR 195 (769)
Q Consensus 123 ~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~--R~~hs~~~~---~~~--~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~ 195 (769)
.....++.+|+.+.+..|+.-......-.- -....++.. .++ .+++.|..++ .++++|.++....|..
T Consensus 288 ~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G-----~l~~lD~~tG~~lw~~ 362 (582)
T 1flg_A 288 LYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNG-----FFYVVDRSNGKLQNAF 362 (582)
T ss_dssp TTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTS-----EEEEEETTTCCEEEEE
T ss_pred cccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCc-----eEEEEECCCCCEeccc
Confidence 344789999999988899875321110000 011222221 222 3555554433 5888888887777765
Q ss_pred c
Q 004198 196 L 196 (769)
Q Consensus 196 v 196 (769)
-
T Consensus 363 ~ 363 (582)
T 1flg_A 363 P 363 (582)
T ss_dssp E
T ss_pred c
Confidence 3
No 163
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=78.49 E-value=34 Score=35.30 Aligned_cols=95 Identities=13% Similarity=0.126 Sum_probs=46.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+..||+.+.+-...... +.+......... ++.+++.|+. ...+.+||+.+.... ..+. .. .
T Consensus 122 ~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~d~~~~~~~-~~~~---~~--~ 186 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNF---EETVYSHHMSPVSTKHCLVAVGTR------GPKVQLCDLKSGSCS-HILQ---GH--R 186 (408)
T ss_dssp SEEEEEETTTTEEEEEEEC---SSCEEEEEECSSCSSCCEEEEEES------SSSEEEEESSSSCCC-EEEC---CC--C
T ss_pred CeEEEeeCCCCccceeccC---CCceeeeEeecCCCCCcEEEEEcC------CCeEEEEeCCCccee-eeec---CC--C
Confidence 5788999988765544322 111111111111 2345666653 245899999874311 1121 00 1
Q ss_pred ccccEEEEEC-CcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 153 RYGHVMDLVS-QRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 153 R~~hs~~~~~-~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
..-.++.... +..+++.|+.++ .+.+||+.+.
T Consensus 187 ~~v~~~~~~~~~~~ll~~~~~dg-----~i~i~d~~~~ 219 (408)
T 4a11_B 187 QEILAVSWSPRYDYILATASADS-----RVKLWDVRRA 219 (408)
T ss_dssp SCEEEEEECSSCTTEEEEEETTS-----CEEEEETTCS
T ss_pred CcEEEEEECCCCCcEEEEEcCCC-----cEEEEECCCC
Confidence 1111222222 233677777654 3777888654
No 164
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=78.44 E-value=49 Score=34.22 Aligned_cols=93 Identities=12% Similarity=0.088 Sum_probs=44.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccc----eEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAH----AAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQ 148 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~h----s~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~ 148 (769)
+.|.++|+.+++-..... ....+| .++.+ ++..++.|+. ...+.++|+.+.. -.... .
T Consensus 103 g~v~lWd~~~~~~~~~~~-----~~~~~H~~~V~~v~~spdg~~l~sgs~------d~~i~iwd~~~~~--~~~~~---~ 166 (344)
T 4gqb_B 103 GAVELWELDENETLIVSK-----FCKYEHDDIVSTVSVLSSGTQAVSGSK------DICIKVWDLAQQV--VLSSY---R 166 (344)
T ss_dssp SEEEEEEECTTSSCEEEE-----EEEECCSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTTE--EEEEE---C
T ss_pred CEEEEEeccCCCceeEee-----ccccCCCCCEEEEEECCCCCEEEEEeC------CCeEEEEECCCCc--EEEEE---c
Confidence 468888888765321110 001112 12222 3455555653 2348999998842 22221 1
Q ss_pred CCCCccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 149 GPGPRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 149 ~p~~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
...... .++.+. .+..+++.|+.++ .+.++|+.+.
T Consensus 167 ~h~~~V-~~~~~~~~~~~~l~s~s~D~-----~v~iwd~~~~ 202 (344)
T 4gqb_B 167 AHAAQV-TCVAASPHKDSVFLSCSEDN-----RILLWDTRCP 202 (344)
T ss_dssp CCSSCE-EEEEECSSCTTEEEEEETTS-----CEEEEETTSS
T ss_pred CcCCce-EEEEecCCCCCceeeecccc-----cccccccccc
Confidence 111111 122222 3335677777664 4778888765
No 165
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=77.48 E-value=64 Score=32.60 Aligned_cols=191 Identities=13% Similarity=0.106 Sum_probs=90.4
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEEC-CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVG-TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~-~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
...+|.+|+.+++-..+. ........-+ +.|++...... .....+|++|+.+ .+..++.. .+.
T Consensus 42 ~~~l~~~d~~~~~~~~l~--------~~~~~~~SpDg~~la~~~~~~~--~~~~~l~~~~~~~--g~~~~l~~---~~~- 105 (347)
T 2gop_A 42 ENTIVIENLKNNARRFIE--------NATMPRISPDGKKIAFMRANEE--KKVSEIWVADLET--LSSKKILE---AKN- 105 (347)
T ss_dssp EEEEEEEETTTCCEEEEE--------SCEEEEECTTSSEEEEEEEETT--TTEEEEEEEETTT--TEEEEEEE---ESE-
T ss_pred cceEEEEeCCCCceEEcc--------cCCCeEECCCCCEEEEEEeccC--CCcceEEEEECCC--CceEEEEc---CCC-
Confidence 568999999988776661 1111111113 35554432211 1245699999987 44555532 111
Q ss_pred ccccEEEEE-CCcEEEEEecC-----------------CCC----CccCceeEEeCCCCCceE-EEcCCCCCCCCccccc
Q 004198 153 RYGHVMDLV-SQRYLVSVSGN-----------------DGK----RVLSDAWALDTAQKPYVW-QRLNPEGDRPSARMYA 209 (769)
Q Consensus 153 R~~hs~~~~-~~~~l~v~GG~-----------------~~~----~~~~dv~~~d~~~~~~~W-~~v~~~~~~P~~r~~h 209 (769)
-...... +++.|++.... ++. .....++++|+.++ +. ..+.. + ...
T Consensus 106 --~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~--~~~~~l~~----~---~~~ 174 (347)
T 2gop_A 106 --IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE--EVIEEFEK----P---RFS 174 (347)
T ss_dssp --EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT--EEEEEEEE----E---TTC
T ss_pred --ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC--eEEeeecC----C---Ccc
Confidence 1222222 33344444321 110 11356899999887 54 44432 1 223
Q ss_pred EEEEecCCEEEEEcccCCCCC--c-ccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccC
Q 004198 210 TASARSDGMFLLCGGRDASGA--P-LADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEG 286 (769)
Q Consensus 210 sa~~~~~g~l~v~GG~~~~~~--~-l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~ 286 (769)
......++ +++.+....... . ..++|.++ .+.++ .+... .......-+++.+++.+..... ....
T Consensus 175 ~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d---~~~~~--~l~~~-----~~~~~~spdg~~l~~~~~~~~~-~~~~ 242 (347)
T 2gop_A 175 SGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE---DGKEE--KMFEK-----VSFYAVDSDGERILLYGKPEKK-YMSE 242 (347)
T ss_dssp EEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE---TTEEE--EEEEE-----ESEEEEEECSSCEEEEECCSSS-CCCS
T ss_pred cccCCCCe-EEEEEecccccccccccccEEEeC---CCceE--EeccC-----cceeeECCCCCEEEEEEccccC-Cccc
Confidence 34445777 555554332111 1 45788888 23332 22111 1122224455544444432211 0112
Q ss_pred CCcEEEEECCCCcEEeccC
Q 004198 287 EAAVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 287 ~~~v~~yd~~t~~W~~~~~ 305 (769)
...++++| +++++.+..
T Consensus 243 ~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 243 HNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp SCEEEEEC--SSCEEESST
T ss_pred cceEEEEC--CCceEeccc
Confidence 45799999 666666543
No 166
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=77.28 E-value=2.4 Score=48.44 Aligned_cols=66 Identities=15% Similarity=0.077 Sum_probs=40.3
Q ss_pred CEEEEccCCCCHH---------------------HHHHHHHHhCCCCCCCCCcceeEEEeccccCCCC-----ChHHHHH
Q 004198 582 PVKVFGDLHGQFG---------------------DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQ-----HSLETIT 635 (769)
Q Consensus 582 ~i~viGDiHG~~~---------------------~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~-----~s~e~l~ 635 (769)
.|+.+.|+||++. .+..+++........ .-+|..||.++..+ ....++.
T Consensus 14 ~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~-----~l~l~~GD~~~gs~~~~~~~g~~~~~ 88 (579)
T 3ztv_A 14 SILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKN-----PLVLHAGDAITGTLYFTLFGGSADAA 88 (579)
T ss_dssp EEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSS-----EEEEECSCCSCSSHHHHTTTTHHHHH
T ss_pred EEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCC-----EEEEeCCCCCCCceeeeecCCHHHHH
Confidence 3889999999853 344555544311111 14556899999663 2345566
Q ss_pred HHHHhhhcCCCceEEecCCcch
Q 004198 636 LLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 636 ll~~lk~~~p~~v~llrGNHE~ 657 (769)
+|..+. --++..||||.
T Consensus 89 ~ln~lg-----~D~~tlGNHEf 105 (579)
T 3ztv_A 89 VMNAGN-----FHYFTLGNHEF 105 (579)
T ss_dssp HHHHHT-----CSEEECCSGGG
T ss_pred HHHhcC-----cCeeecccccc
Confidence 665553 23567899995
No 167
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=77.20 E-value=63 Score=32.34 Aligned_cols=170 Identities=10% Similarity=0.136 Sum_probs=85.6
Q ss_pred CcEEEEECC-CCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVL-TRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~-~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+++||+. ...|..-... + ...+.+.. ++.||+... ...+++||.. ....|..-. +..
T Consensus 117 ~~l~~~d~~g~~~~~~~~~~-----~-~~~~~~~~~~g~l~vgt~-------~~~l~~~d~~-g~~~~~~~~-----~~~ 177 (330)
T 3hxj_A 117 GHLYAINTDGTEKWRFKTKK-----A-IYATPIVSEDGTIYVGSN-------DNYLYAINPD-GTEKWRFKT-----NDA 177 (330)
T ss_dssp SEEEEECTTSCEEEEEECSS-----C-CCSCCEECTTSCEEEECT-------TSEEEEECTT-SCEEEEEEC-----SSC
T ss_pred CEEEEEcCCCCEEEEEcCCC-----c-eeeeeEEcCCCEEEEEcC-------CCEEEEECCC-CCEeEEEec-----CCC
Confidence 468889987 3347654321 1 12223333 567777432 1458999988 445676542 111
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
.-.+++...++.+|+.. ..+++|| .+....|+..... ....+.+...++.+|+... -
T Consensus 178 -~~~~~~~d~~g~l~v~t--------~~l~~~d-~~g~~~~~~~~~~------~~~~~~~~~~~g~l~v~t~-------~ 234 (330)
T 3hxj_A 178 -ITSAASIGKDGTIYFGS--------DKVYAIN-PDGTEKWNFYAGY------WTVTRPAISEDGTIYVTSL-------D 234 (330)
T ss_dssp -CCSCCEECTTCCEEEES--------SSEEEEC-TTSCEEEEECCSS------CCCSCCEECTTSCEEEEET-------T
T ss_pred -ceeeeEEcCCCEEEEEe--------CEEEEEC-CCCcEEEEEccCC------cceeceEECCCCeEEEEcC-------C
Confidence 12233333455666643 4689999 5554578765322 1122333445667877431 1
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCC-cEEe
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAG-VWLD 302 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~-~W~~ 302 (769)
.-++.|+..... .|...... ... .+.++. ++.||+... ...+++||+... .|..
T Consensus 235 ~gl~~~~~~g~~--~~~~~~~~---~~~-~~~~~~~~g~l~v~t~----------~ggl~~~d~~g~~~~~~ 290 (330)
T 3hxj_A 235 GHLYAINPDGTE--KWRFKTGK---RIE-SSPVIGNTDTIYFGSY----------DGHLYAINPDGTEKWNF 290 (330)
T ss_dssp TEEEEECTTSCE--EEEEECSS---CCC-SCCEECTTSCEEEECT----------TCEEEEECTTSCEEEEE
T ss_pred CeEEEECCCCCE--eEEeeCCC---Ccc-ccceEcCCCeEEEecC----------CCCEEEECCCCcEEEEE
Confidence 346777643332 33332211 111 123333 677776422 124889987433 4553
No 168
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=76.87 E-value=35 Score=35.54 Aligned_cols=113 Identities=6% Similarity=-0.060 Sum_probs=52.0
Q ss_pred cEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCC--CcccccEEEEecCC-EEEEEcccCCCCCcccceEEEec
Q 004198 164 RYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRP--SARMYATASARSDG-MFLLCGGRDASGAPLADAYGLLM 240 (769)
Q Consensus 164 ~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P--~~r~~hsa~~~~~g-~l~v~GG~~~~~~~l~d~~~ld~ 240 (769)
..+++.|+.++ .+.+||+.+. +-...-...... ......+.....++ .+++.|+.+.. ...+..++.
T Consensus 178 ~~~l~~~~~dg-----~v~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~---~~~i~~~d~ 247 (416)
T 2pm9_A 178 AHVFASAGSSN-----FASIWDLKAK--KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN---DPSILIWDL 247 (416)
T ss_dssp TTEEEEESSSS-----CEEEEETTTT--EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS---SCCCCEEET
T ss_pred CcEEEEEcCCC-----CEEEEECCCC--CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC---CceEEEEeC
Confidence 46777777554 4888998876 322221110000 01222333344554 56666655431 113445555
Q ss_pred CCCCceEEEeCCCCC-CCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 241 HRNGQWEWTLAPGVA-PSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 241 ~~~~~W~W~~~~~~~-P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
..... . ..... .....-.++++. ++.+++.|+.. ..+.+||+.+.+
T Consensus 248 ~~~~~-~---~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d---------g~v~~wd~~~~~ 296 (416)
T 2pm9_A 248 RNANT-P---LQTLNQGHQKGILSLDWCHQDEHLLLSSGRD---------NTVLLWNPESAE 296 (416)
T ss_dssp TSTTS-C---SBCCCSCCSSCEEEEEECSSCSSCEEEEESS---------SEEEEECSSSCC
T ss_pred CCCCC-C---cEEeecCccCceeEEEeCCCCCCeEEEEeCC---------CCEEEeeCCCCc
Confidence 43210 0 00010 011111233332 56777777742 358899987764
No 169
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=76.10 E-value=1.4 Score=49.41 Aligned_cols=65 Identities=22% Similarity=0.329 Sum_probs=36.8
Q ss_pred CEEEEccCCCCH------------------HHHHHHHHHhCCCCCCCCCcceeEEE-eccccCCCCC-----hHHHHHHH
Q 004198 582 PVKVFGDLHGQF------------------GDLMRLFDEYGFPSTAGDITYIDYLF-LGDYVDRGQH-----SLETITLL 637 (769)
Q Consensus 582 ~i~viGDiHG~~------------------~~l~~~l~~~~~~~~~~~~~~~~~vf-LGD~vDrG~~-----s~e~l~ll 637 (769)
.|+.+.|+||++ ..+..+++.......+ .+++ .||.++..+. ...++.+|
T Consensus 8 ~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~------~llldaGD~~~g~~~~~~~~g~~~~~~l 81 (509)
T 3ive_A 8 TIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKA------TWFFDAGDYFTGPYISSLTKGKAIIDIM 81 (509)
T ss_dssp EEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSS------EEEEECSCCSSSSHHHHTTTTHHHHHHH
T ss_pred EEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCC------eEEEECCCCCCCchhhhhcCChHHHHHH
Confidence 488899999874 3455555544321111 3444 8999984321 23344444
Q ss_pred HHhhhcCCCceEEecCCcch
Q 004198 638 LALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 638 ~~lk~~~p~~v~llrGNHE~ 657 (769)
..+. --++..||||.
T Consensus 82 n~lg-----~D~~tlGNHEf 96 (509)
T 3ive_A 82 NTMP-----FDAVTIGNHEF 96 (509)
T ss_dssp TTSC-----CSEECCCGGGG
T ss_pred HhcC-----CcEEeeccccc
Confidence 3332 23566799994
No 170
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=75.84 E-value=56 Score=33.48 Aligned_cols=163 Identities=10% Similarity=0.101 Sum_probs=75.7
Q ss_pred CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCC
Q 004198 109 GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQ 188 (769)
Q Consensus 109 ~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~ 188 (769)
++.+++.||. ...+.++|..+ .+|......... ....-.++....++.+++.|+.++. +.++|..+
T Consensus 27 ~g~~las~~~------D~~i~iw~~~~--~~~~~~~~~~~~-h~~~v~~~~~sp~g~~l~s~s~D~~-----v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGG------DRRIRIWGTEG--DSWICKSVLSEG-HQRTVRKVAWSPCGNYLASASFDAT-----TCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEET------TSCEEEEEEET--TEEEEEEEECSS-CSSCEEEEEECTTSSEEEEEETTSC-----EEEEEECC
T ss_pred CCCEEEEEcC------CCeEEEEEcCC--Ccceeeeeeccc-cCCcEEEEEECCCCCEEEEEECCCc-----EEEEEccC
Confidence 3455555653 23478888877 445433210111 1111123333344566777776653 55666655
Q ss_pred CCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-
Q 004198 189 KPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV- 267 (769)
Q Consensus 189 ~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~- 267 (769)
. .+..+..... ....-.+.....++.+++.|+.+. .+..++......+........ ..... .++++.
T Consensus 93 ~--~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~-h~~~v-~~~~~~p 160 (345)
T 3fm0_A 93 D--DFECVTTLEG--HENEVKSVAWAPSGNLLATCSRDK------SVWVWEVDEEDEYECVSVLNS-HTQDV-KHVVWHP 160 (345)
T ss_dssp C---EEEEEEECC--CSSCEEEEEECTTSSEEEEEETTS------CEEEEEECTTSCEEEEEEECC-CCSCE-EEEEECS
T ss_pred C--CeEEEEEccC--CCCCceEEEEeCCCCEEEEEECCC------eEEEEECCCCCCeEEEEEecC-cCCCe-EEEEECC
Confidence 5 3433322100 111122333446777888887653 244444433322221111100 00011 122222
Q ss_pred CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEeccCC
Q 004198 268 GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNGL 306 (769)
Q Consensus 268 ~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 306 (769)
++.+++.|+.. ..+.+||..+..|......
T Consensus 161 ~~~~l~s~s~d---------~~i~~w~~~~~~~~~~~~~ 190 (345)
T 3fm0_A 161 SQELLASASYD---------DTVKLYREEEDDWVCCATL 190 (345)
T ss_dssp SSSCEEEEETT---------SCEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEeCC---------CcEEEEEecCCCEEEEEEe
Confidence 56677777643 3488899888888765444
No 171
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=75.66 E-value=32 Score=39.59 Aligned_cols=202 Identities=13% Similarity=0.062 Sum_probs=95.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCC-------CCcCcEEEEEccCCcceEEEeeecC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAG-------HSTDDLYVLDLTNDKFKWHRVVVQG 147 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~-------~~~~dl~~~d~~t~~~~W~~~~~~g 147 (769)
.+++++|+.+++...... .+.......+-.-+++.++++.....+ ....++|++++.+...+-..+. .
T Consensus 147 ~~i~v~dl~tg~~~~~~~---~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~--~ 221 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDV---IEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH--E 221 (695)
T ss_dssp CEEEEEETTTCCBCSSCC---BSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE--C
T ss_pred EEEEEEECCCCCCcCCcc---cCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE--e
Confidence 579999999988641111 111111111122244444444332110 1245699999987432222222 1
Q ss_pred CCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCC
Q 004198 148 QGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDA 227 (769)
Q Consensus 148 ~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~ 227 (769)
....+..........++..++++..+.. ..+++|.+|..+. .|..+... ... ....+..++.+|+....+
T Consensus 222 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~--~~~~l~~~----~~~--~~~~~~~~g~l~~~s~~~- 291 (695)
T 2bkl_A 222 RTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEK--DFRLLVKG----VGA--KYEVHAWKDRFYVLTDEG- 291 (695)
T ss_dssp CCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCS--SCEEEEEC----SSC--CEEEEEETTEEEEEECTT-
T ss_pred cCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCC--ceEEeecC----CCc--eEEEEecCCcEEEEECCC-
Confidence 1111222233333444444444443321 3467888887666 67766532 111 122222455655554322
Q ss_pred CCCcccceEEEecCCCCc--eEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEec
Q 004198 228 SGAPLADAYGLLMHRNGQ--WEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303 (769)
Q Consensus 228 ~~~~l~d~~~ld~~~~~~--W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~ 303 (769)
.....++.++...... |+-..... +.... ...++.++.+++...... ...+++++.....-+.+
T Consensus 292 --~~~~~l~~~d~~~~~~~~~~~l~~~~--~~~~l-~~~~~~~~~lv~~~~~dg-------~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 292 --APRQRVFEVDPAKPARASWKEIVPED--SSASL-LSVSIVGGHLSLEYLKDA-------TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp --CTTCEEEEEBTTBCSGGGCEEEECCC--SSCEE-EEEEEETTEEEEEEEETT-------EEEEEEEETTCCEEEEC
T ss_pred --CCCCEEEEEeCCCCCccCCeEEecCC--CCCeE-EEEEEECCEEEEEEEECC-------EEEEEEEeCCCCeeEEe
Confidence 1235678888754422 54333221 11112 233445888887765332 34588999765544444
No 172
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=75.47 E-value=1.1e+02 Score=35.34 Aligned_cols=181 Identities=10% Similarity=0.033 Sum_probs=84.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+.+||..+++....-... .. .-.+++.. ++..++.|+. ...+.+||+.+.. ....... + . ..
T Consensus 77 g~i~vw~~~~~~~~~~~~~~--~~--~v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~~-~~~~~~~-~-~--~~ 141 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEAH--PD--YIRSIAVHPTKPYVLSGSD------DLTVKLWNWENNW-ALEQTFE-G-H--EH 141 (814)
T ss_dssp SEEEEEETTTCCEEEEEECC--SS--CEEEEEECSSSSEEEEEET------TSEEEEEEGGGTS-EEEEEEE-C-C--SS
T ss_pred CeEEEEECCCCcEEEEEecC--CC--CEEEEEEeCCCCEEEEEcC------CCEEEEEECCCCc-eEEEEEc-C-C--CC
Confidence 57889999888765332110 00 11112221 3334444543 2358899987731 2333321 1 1 11
Q ss_pred cccEEEEEC-CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec--CCEEEEEcccCCCCC
Q 004198 154 YGHVMDLVS-QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS--DGMFLLCGGRDASGA 230 (769)
Q Consensus 154 ~~hs~~~~~-~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~--~g~l~v~GG~~~~~~ 230 (769)
.-.+++... ++.+++.|+.++ .+.+||+.+....+...... .....+..... ++.+++.|+.++
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~l~~~~~dg--- 208 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQSTPNFTLTTGQ-----ERGVNYVDYYPLPDKPYMITASDDL--- 208 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSSCSEEEECCC-----TTCCCEEEECCSTTCCEEEEECTTS---
T ss_pred cEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcceeEEecCC-----CCCEEEEEEEECCCCCEEEEEeCCC---
Confidence 112232333 456777777654 58888886653333332211 11122333333 677777776532
Q ss_pred cccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcE
Q 004198 231 PLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300 (769)
Q Consensus 231 ~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W 300 (769)
.+..++..+. .-... ..+. .... .++++. ++.+++.|+.. ..+.+||+.+.+-
T Consensus 209 ---~i~~~d~~~~-~~~~~-~~~~--~~~v-~~~~~~~~~~~l~~~~~d---------g~v~vwd~~~~~~ 262 (814)
T 3mkq_A 209 ---TIKIWDYQTK-SCVAT-LEGH--MSNV-SFAVFHPTLPIIISGSED---------GTLKIWNSSTYKV 262 (814)
T ss_dssp ---EEEEEETTTT-EEEEE-EECC--SSCE-EEEEECSSSSEEEEEETT---------SCEEEEETTTCSE
T ss_pred ---EEEEEECCCC-cEEEE-EcCC--CCCE-EEEEEcCCCCEEEEEeCC---------CeEEEEECCCCcE
Confidence 3556665533 11111 1110 1111 122222 55677777632 3488889877543
No 173
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=74.86 E-value=29 Score=36.94 Aligned_cols=63 Identities=10% Similarity=0.109 Sum_probs=34.8
Q ss_pred ECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCC
Q 004198 108 VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTA 187 (769)
Q Consensus 108 ~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~ 187 (769)
.++..++.|+. ...+.+||..+.. -..... + ....-.+..+.+ .+++.|+.++ .+.++|+.
T Consensus 141 ~d~~~l~~g~~------dg~i~iwd~~~~~--~~~~~~-~----h~~~v~~l~~~~-~~l~sg~~dg-----~i~vwd~~ 201 (435)
T 1p22_A 141 YDDQKIVSGLR------DNTIKIWDKNTLE--CKRILT-G----HTGSVLCLQYDE-RVIITGSSDS-----TVRVWDVN 201 (435)
T ss_dssp CCSSEEEEEES------SSCEEEEESSSCC--EEEEEC-C----CSSCEEEEECCS-SEEEEEETTS-----CEEEEESS
T ss_pred ECCCEEEEEeC------CCeEEEEeCCCCe--EEEEEc-C----CCCcEEEEEECC-CEEEEEcCCC-----eEEEEECC
Confidence 35556666664 2458999998743 222211 1 111223333444 5667777654 47888887
Q ss_pred CC
Q 004198 188 QK 189 (769)
Q Consensus 188 ~~ 189 (769)
+.
T Consensus 202 ~~ 203 (435)
T 1p22_A 202 TG 203 (435)
T ss_dssp SC
T ss_pred CC
Confidence 76
No 174
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=74.73 E-value=1.2e+02 Score=34.57 Aligned_cols=121 Identities=19% Similarity=0.216 Sum_probs=68.4
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.++.+|..+++ |+.-.... ...-....+.+..++.||+..+.. .......++.||..+.+..|+.-...+. |..
T Consensus 127 g~l~alD~~tG~~~W~~~~~~~-~~~~~~~~~P~v~~~~v~vg~~~~-~~~~~g~v~a~D~~tG~~~W~~~~~~~~-p~~ 203 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTDP-AKPYSITGAPRVVKGKVIIGNGGA-EYGVRGFVSAYDADTGKLAWRFYTVPGD-PAL 203 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSCT-TSSCBCCSCCEEETTEEEECCBCT-TTCCBCEEEEEETTTCCEEEEEESSCCC-TTS
T ss_pred CEEEEEECCCCCEeeeeccCCC-CCcceecCCCEEECCEEEEeCCCC-CcCCCCEEEEEECCCCcEEEEecccCCC-CCc
Confidence 579999999886 88654211 111122233455688888754321 1113457999999998888986532111 110
Q ss_pred c----------------------cc----cEEEEE-CCcEEEEEecCC-------------CCCccCceeEEeCCCCCce
Q 004198 153 R----------------------YG----HVMDLV-SQRYLVSVSGND-------------GKRVLSDAWALDTAQKPYV 192 (769)
Q Consensus 153 R----------------------~~----hs~~~~-~~~~l~v~GG~~-------------~~~~~~dv~~~d~~~~~~~ 192 (769)
. .+ .+.++. ..+.+|+..++. ...+...++.+|+++....
T Consensus 204 ~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~ 283 (668)
T 1kv9_A 204 PYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLA 283 (668)
T ss_dssp CCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEE
T ss_pred cccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCcee
Confidence 0 00 012232 344666654432 1223456999999999889
Q ss_pred EEEcCC
Q 004198 193 WQRLNP 198 (769)
Q Consensus 193 W~~v~~ 198 (769)
|+.-..
T Consensus 284 W~~~~~ 289 (668)
T 1kv9_A 284 WHYQVT 289 (668)
T ss_dssp EEEESS
T ss_pred eEeecC
Confidence 987643
No 175
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=74.71 E-value=42 Score=35.71 Aligned_cols=96 Identities=10% Similarity=0.102 Sum_probs=48.1
Q ss_pred CcEEEEECCCCcEEEec-CCCCCCcccccceEEEE---CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 75 NSVHLYDVLTRKWTRIR-PAGEPPSPRAAHAAAAV---GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~-~~g~~P~~R~~hs~~~~---~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
+.|.++|+.+.....+. ..| ....-.++.+ ++.+++.|+.+ ..+.++|+.+ .....+.. ...
T Consensus 142 g~i~lWd~~~~~~~~~~~~~g----H~~~V~~l~f~p~~~~~l~s~s~D------~~v~iwd~~~--~~~~~~~~--~~~ 207 (435)
T 4e54_B 142 GDIMLWNFGIKDKPTFIKGIG----AGGSITGLKFNPLNTNQFYASSME------GTTRLQDFKG--NILRVFAS--SDT 207 (435)
T ss_dssp SCEEEECSSCCSCCEEECCCS----SSCCCCEEEECSSCTTEEEEECSS------SCEEEEETTS--CEEEEEEC--CSS
T ss_pred CEEEEEECCCCCceeEEEccC----CCCCEEEEEEeCCCCCEEEEEeCC------CEEEEeeccC--CceeEEec--cCC
Confidence 56888898876543332 221 0111112222 34445555532 3488889887 33433321 111
Q ss_pred CCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
......++....++.+++.|+.++ .+.++|+...
T Consensus 208 ~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~ 241 (435)
T 4e54_B 208 INIWFCSLDVSASSRMVVTGDNVG-----NVILLNMDGK 241 (435)
T ss_dssp CSCCCCCEEEETTTTEEEEECSSS-----BEEEEESSSC
T ss_pred CCccEEEEEECCCCCEEEEEeCCC-----cEeeeccCcc
Confidence 112222344445556777787654 4778887654
No 176
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=74.19 E-value=81 Score=32.17 Aligned_cols=51 Identities=8% Similarity=0.024 Sum_probs=25.7
Q ss_pred EEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccC
Q 004198 77 VHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTN 135 (769)
Q Consensus 77 v~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t 135 (769)
+|.+|..+++.+.+..... .....+.++.-++.+|+.+.. ...+.+|++.+
T Consensus 79 ~~~~~~~~g~~~~~~~~~~--~~~~p~~~~~dg~~l~~~~~~------~~~v~~~~~~~ 129 (361)
T 3scy_A 79 AFAFDKEKGTLHLLNTQKT--MGADPCYLTTNGKNIVTANYS------GGSITVFPIGQ 129 (361)
T ss_dssp EEEEETTTTEEEEEEEEEC--SSSCEEEEEECSSEEEEEETT------TTEEEEEEBCT
T ss_pred EEEEeCCCCcEEEeeEecc--CCCCcEEEEECCCEEEEEECC------CCEEEEEEeCC
Confidence 4555666677776653210 111112233334467765431 24588888865
No 177
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=73.84 E-value=1.1e+02 Score=37.52 Aligned_cols=123 Identities=11% Similarity=-0.015 Sum_probs=59.2
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+.+||..+.+-...-.. ....-.++.+ ++..++.|+. ...+.++|+.+.. ...... + .
T Consensus 637 ~~i~vw~~~~~~~~~~~~~-----h~~~v~~~~~s~~~~~l~s~~~------d~~v~vwd~~~~~--~~~~~~-~--~-- 698 (1249)
T 3sfz_A 637 KTLQVFKAETGEKLLDIKA-----HEDEVLCCAFSSDDSYIATCSA------DKKVKIWDSATGK--LVHTYD-E--H-- 698 (1249)
T ss_dssp SCEEEEETTTCCEEEEECC-----CSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCC--EEEEEE-C--C--
T ss_pred CeEEEEECCCCCEEEEecc-----CCCCEEEEEEecCCCEEEEEeC------CCeEEEEECCCCc--eEEEEc-C--C--
Confidence 5688899988764332111 0111122222 3445555553 2458999998843 322211 1 1
Q ss_pred ccccEEEEE-C--CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 153 RYGHVMDLV-S--QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 153 R~~hs~~~~-~--~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
......+.+ . +..+++.|+.++ .+.+||+.+...... +.. ....-.++....++.+++.|+.+
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~-----~v~vwd~~~~~~~~~-~~~-----h~~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDF-----FLKLWDLNQKECRNT-MFG-----HTNSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTS-----CEEEEETTSSSEEEE-ECC-----CSSCEEEEEECSSTTEEEEEESS
T ss_pred CCcEEEEEEecCCCceEEEEEeCCC-----eEEEEECCCcchhhe-ecC-----CCCCEEEEEEecCCCEEEEEECC
Confidence 111122223 2 345666676554 478888877622211 111 11112233445677777777654
No 178
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=73.83 E-value=96 Score=32.86 Aligned_cols=137 Identities=13% Similarity=0.118 Sum_probs=65.7
Q ss_pred CcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCc
Q 004198 126 DDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSA 205 (769)
Q Consensus 126 ~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~ 205 (769)
..+.+||+.+.. -.... ... ...-.+++...++..++.|+.++ .+.+||+.+.... ..+... ..
T Consensus 290 ~~i~vwd~~~~~--~~~~~---~~~-~~~v~~~~~~~~~~~l~sg~~dg-----~i~vwd~~~~~~~-~~~~~h----~~ 353 (464)
T 3v7d_B 290 NTLIVWDVAQMK--CLYIL---SGH-TDRIYSTIYDHERKRCISASMDT-----TIRIWDLENGELM-YTLQGH----TA 353 (464)
T ss_dssp SCEEEEETTTTE--EEEEE---CCC-SSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTEEE-EEECCC----SS
T ss_pred CeEEEEECCCCc--EEEEe---cCC-CCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCcEE-EEEeCC----CC
Confidence 359999998732 22221 111 11122333444445666676554 4888998776211 111111 11
Q ss_pred ccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCccc
Q 004198 206 RMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIE 285 (769)
Q Consensus 206 r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~ 285 (769)
. -.++.. ++..++.|+.++ .+..++..+.. -.+.... .......+...++.+++.|+ .
T Consensus 354 ~--v~~~~~-~~~~l~s~s~dg------~v~vwd~~~~~-~~~~~~~----~~~~~~~~~~~~~~~l~~~~-d------- 411 (464)
T 3v7d_B 354 L--VGLLRL-SDKFLVSAAADG------SIRGWDANDYS-RKFSYHH----TNLSAITTFYVSDNILVSGS-E------- 411 (464)
T ss_dssp C--EEEEEE-CSSEEEEEETTS------EEEEEETTTCC-EEEEEEC----TTCCCEEEEEECSSEEEEEE-T-------
T ss_pred c--EEEEEE-cCCEEEEEeCCC------cEEEEECCCCc-eeeeecC----CCCccEEEEEeCCCEEEEec-C-------
Confidence 1 122222 345666666542 35555655331 1111111 11122233344677777766 1
Q ss_pred CCCcEEEEECCCCcEEe
Q 004198 286 GEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 286 ~~~~v~~yd~~t~~W~~ 302 (769)
..+.+||..+++-..
T Consensus 412 --g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 412 --NQFNIYNLRSGKLVH 426 (464)
T ss_dssp --TEEEEEETTTCCEEE
T ss_pred --CeEEEEECCCCcEEe
Confidence 348999998886554
No 179
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=73.36 E-value=22 Score=37.44 Aligned_cols=154 Identities=12% Similarity=0.046 Sum_probs=72.2
Q ss_pred EEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCC
Q 004198 111 MVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP 190 (769)
Q Consensus 111 ~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~ 190 (769)
.+++.|+. ...+.++|+.+. +...... .......-.++....++.+++.|+.++ .+.+||+.+..
T Consensus 145 ~~l~s~~~------dg~i~iwd~~~~--~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~ 209 (402)
T 2aq5_A 145 NVLLSAGC------DNVILVWDVGTG--AAVLTLG--PDVHPDTIYSVDWSRDGALICTSCRDK-----RVRVIEPRKGT 209 (402)
T ss_dssp TEEEEEET------TSCEEEEETTTT--EEEEEEC--TTTCCSCEEEEEECTTSSCEEEEETTS-----EEEEEETTTTE
T ss_pred CEEEEEcC------CCEEEEEECCCC--CccEEEe--cCCCCCceEEEEECCCCCEEEEEecCC-----cEEEEeCCCCc
Confidence 46666654 235899999883 3333210 011111122333333445666676553 58889998762
Q ss_pred ceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCc-eEEEeCCCCCCCcccceEEEEe--
Q 004198 191 YVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQ-WEWTLAPGVAPSPRYQHAAVFV-- 267 (769)
Q Consensus 191 ~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~-W~W~~~~~~~P~~R~~hs~~~~-- 267 (769)
......... .......+....++.+++.|..... -..+..++...... ......... ..-..+++.
T Consensus 210 ~~~~~~~~~----~~~~~~~~~~~~~~~~l~~g~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~----~~v~~~~~s~~ 278 (402)
T 2aq5_A 210 VVAEKDRPH----EGTRPVHAVFVSEGKILTTGFSRMS---ERQVALWDTKHLEEPLSLQELDTS----SGVLLPFFDPD 278 (402)
T ss_dssp EEEEEECSS----CSSSCCEEEECSTTEEEEEEECTTC---CEEEEEEETTBCSSCSEEEECCCC----SSCEEEEEETT
T ss_pred eeeeeccCC----CCCcceEEEEcCCCcEEEEeccCCC---CceEEEEcCccccCCceEEeccCC----CceeEEEEcCC
Confidence 222110111 1111234445578888877732111 23456666653211 111111111 111233333
Q ss_pred CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 268 GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 268 ~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
+..+++.|+.. ..+.+||..+.+
T Consensus 279 ~~~l~~~g~~d---------g~i~i~d~~~~~ 301 (402)
T 2aq5_A 279 TNIVYLCGKGD---------SSIRYFEITSEA 301 (402)
T ss_dssp TTEEEEEETTC---------SCEEEEEECSST
T ss_pred CCEEEEEEcCC---------CeEEEEEecCCC
Confidence 44566666422 348888887765
No 180
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=72.71 E-value=90 Score=32.03 Aligned_cols=77 Identities=8% Similarity=0.072 Sum_probs=36.3
Q ss_pred cEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCC--CCCCcccceEEEEe-CCEEEEEecccCCCCccc
Q 004198 209 ATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPG--VAPSPRYQHAAVFV-GARLHVTGGALRGGRAIE 285 (769)
Q Consensus 209 hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~--~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~ 285 (769)
.++....++ +++.|+.+ ..+..|+..+. ......... ..+....-.++++. ++.+++.|+..+.
T Consensus 190 ~~~~~~~~~-~l~~~~~d------g~i~i~d~~~~-~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~----- 256 (397)
T 1sq9_A 190 TSVDISERG-LIATGFNN------GTVQISELSTL-RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS----- 256 (397)
T ss_dssp CEEEECTTS-EEEEECTT------SEEEEEETTTT-EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT-----
T ss_pred eEEEECCCc-eEEEEeCC------CcEEEEECCCC-ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCC-----
Confidence 344455677 77777643 24666666543 111111110 00001111233332 5667777764310
Q ss_pred CCCcEEEEECCCCc
Q 004198 286 GEAAVAVLDTAAGV 299 (769)
Q Consensus 286 ~~~~v~~yd~~t~~ 299 (769)
...+.+||+.+.+
T Consensus 257 -~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 257 -FGCITLYETEFGE 269 (397)
T ss_dssp -EEEEEEEETTTCC
T ss_pred -CceEEEEECCCCc
Confidence 1458999987764
No 181
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=72.67 E-value=77 Score=31.22 Aligned_cols=14 Identities=36% Similarity=0.499 Sum_probs=10.1
Q ss_pred CcEEEEECCCCcEE
Q 004198 75 NSVHLYDVLTRKWT 88 (769)
Q Consensus 75 ~dv~~yD~~~~~W~ 88 (769)
+.+..+|..+++-.
T Consensus 89 g~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 89 AEVQLWDVQQQKRL 102 (318)
T ss_dssp SEEEEEETTTTEEE
T ss_pred CcEEEeecCCceeE
Confidence 46888888887643
No 182
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=72.66 E-value=27 Score=35.34 Aligned_cols=182 Identities=13% Similarity=0.106 Sum_probs=81.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--C---CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--G---TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQG 149 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~---~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~ 149 (769)
+.+.+||+.+++...+...+ . ...-.++.. + +.+++.|+. ...+.+||+.+....-..+. + .
T Consensus 44 ~~v~iw~~~~~~~~~~~~~~---~-~~~v~~~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~--~-~ 110 (357)
T 3i2n_A 44 GVIQLYEIQHGDLKLLREIE---K-AKPIKCGTFGATSLQQRYLATGDF------GGNLHIWNLEAPEMPVYSVK--G-H 110 (357)
T ss_dssp EEEEEEEECSSSEEEEEEEE---E-SSCEEEEECTTCCTTTCCEEEEET------TSCEEEECTTSCSSCSEEEC--C-C
T ss_pred cEEEEEeCCCCcccceeeec---c-cCcEEEEEEcCCCCCCceEEEecC------CCeEEEEeCCCCCccEEEEE--e-c
Confidence 57889999988776543221 0 011122222 2 355555653 23488898887431122221 0 0
Q ss_pred CCCccccEEEE------ECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEE----EecCCEE
Q 004198 150 PGPRYGHVMDL------VSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATAS----ARSDGMF 219 (769)
Q Consensus 150 p~~R~~hs~~~------~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~----~~~~g~l 219 (769)
... -.++.. ..+..+++.|+.++ .+.+||+.+.......+...... ..+...+.. ...++.+
T Consensus 111 ~~~--v~~~~~~~~~~~s~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~ 182 (357)
T 3i2n_A 111 KEI--INAIDGIGGLGIGEGAPEIVTGSRDG-----TVKVWDPRQKDDPVANMEPVQGE-NKRDCWTVAFGNAYNQEERV 182 (357)
T ss_dssp SSC--EEEEEEESGGGCC-CCCEEEEEETTS-----CEEEECTTSCSSCSEEECCCTTS-CCCCEEEEEEECCCC-CCCE
T ss_pred ccc--eEEEeeccccccCCCccEEEEEeCCC-----eEEEEeCCCCCCcceeccccCCC-CCCceEEEEEEeccCCCCCE
Confidence 111 111111 12334666676554 47888887652112233221110 111111222 2256777
Q ss_pred EEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe----CCEEEEEecccCCCCcccCCCcEEEEEC
Q 004198 220 LLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV----GARLHVTGGALRGGRAIEGEAAVAVLDT 295 (769)
Q Consensus 220 ~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~----~~~i~V~GG~~~~~~~~~~~~~v~~yd~ 295 (769)
++.|+.+ ..+..++..+.. -.+... ....-.++++. ++..++.|+.. ..+.+||.
T Consensus 183 l~~~~~d------~~i~i~d~~~~~-~~~~~~-----~~~~v~~~~~~~~~~~~~~l~~~~~d---------g~i~i~d~ 241 (357)
T 3i2n_A 183 VCAGYDN------GDIKLFDLRNMA-LRWETN-----IKNGVCSLEFDRKDISMNKLVATSLE---------GKFHVFDM 241 (357)
T ss_dssp EEEEETT------SEEEEEETTTTE-EEEEEE-----CSSCEEEEEESCSSSSCCEEEEEEST---------TEEEEEEE
T ss_pred EEEEccC------CeEEEEECccCc-eeeecC-----CCCceEEEEcCCCCCCCCEEEEECCC---------CeEEEEeC
Confidence 7777643 246666665441 111111 11112333343 45667776632 34778887
Q ss_pred CCC
Q 004198 296 AAG 298 (769)
Q Consensus 296 ~t~ 298 (769)
.+.
T Consensus 242 ~~~ 244 (357)
T 3i2n_A 242 RTQ 244 (357)
T ss_dssp EEE
T ss_pred cCC
Confidence 653
No 183
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=72.28 E-value=1.2e+02 Score=33.50 Aligned_cols=197 Identities=10% Similarity=0.108 Sum_probs=92.6
Q ss_pred CcEEEEEC--CCCcEE-EecCCCCCCcccccceEEEE-----CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeec
Q 004198 75 NSVHLYDV--LTRKWT-RIRPAGEPPSPRAAHAAAAV-----GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ 146 (769)
Q Consensus 75 ~dv~~yD~--~~~~W~-~l~~~g~~P~~R~~hs~~~~-----~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~ 146 (769)
+.+..||+ .+.+-. .+. .|. .| .+.+..- ++.+|+..-. .+.+.++|..+.+ .-..+++.
T Consensus 200 ~~V~v~D~~~~t~~~~~~i~-~g~--~p--~~va~sp~~~~dg~~l~v~~~~------~~~v~v~D~~t~~-~~~~i~~~ 267 (543)
T 1nir_A 200 ARIDMIDLWAKEPTKVAEIK-IGI--EA--RSVESSKFKGYEDRYTIAGAYW------PPQFAIMDGETLE-PKQIVSTR 267 (543)
T ss_dssp SEEEEEETTSSSCEEEEEEE-CCS--EE--EEEEECCSTTCTTTEEEEEEEE------SSEEEEEETTTCC-EEEEEECC
T ss_pred CeEEEEECcCCCCcEEEEEe-cCC--Cc--ceEEeCCCcCCCCCEEEEEEcc------CCeEEEEeccccc-cceeeccc
Confidence 56888999 555432 222 221 11 2222222 3466665422 2458889988742 12333321
Q ss_pred CC-------CCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceE-EEcCCCCCCCCcccccEEEEecCCE
Q 004198 147 GQ-------GPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVW-QRLNPEGDRPSARMYATASARSDGM 218 (769)
Q Consensus 147 g~-------~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W-~~v~~~~~~P~~r~~hsa~~~~~g~ 218 (769)
+. .|.+|..+....-.++.+|+-... .+.++.+|..+..... ..+. ..+.-|......+++
T Consensus 268 g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~------~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 268 GMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIG------AAPFLHDGGWDSSHR 336 (543)
T ss_dssp EECSSSCCEESCCCEEEEEECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEEE------CCSSCCCEEECTTSC
T ss_pred CcccCccccccCCceEEEEECCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEec------cCcCccCceECCCCC
Confidence 11 122333333222234566665432 3568999987642111 1221 123334555566776
Q ss_pred EEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCC
Q 004198 219 FLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAA 297 (769)
Q Consensus 219 l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t 297 (769)
.++..+.. .+.+..+|..+. +-......+..|.+..+.....- ++.+|+.+... .+.|-++|+.+
T Consensus 337 ~l~va~~~-----~~~v~v~D~~tg-~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~--------d~~V~v~d~~~ 402 (543)
T 1nir_A 337 YFMTAANN-----SNKVAVIDSKDR-RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG--------DGSISLIGTDP 402 (543)
T ss_dssp EEEEEEGG-----GTEEEEEETTTT-EEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS--------SSEEEEEECCT
T ss_pred EEEEEecC-----CCeEEEEECCCC-eEEEeeccCCCCCCCCCcccCCCCCccEEEeccCC--------CceEEEEEeCC
Confidence 44433321 234566776644 22222222333333222222112 37788776421 24588888877
Q ss_pred C-----cEEeccCCcc
Q 004198 298 G-----VWLDRNGLVT 308 (769)
Q Consensus 298 ~-----~W~~~~~~~~ 308 (769)
. .|+.+..+..
T Consensus 403 ~~~~~~~~~~v~~l~~ 418 (543)
T 1nir_A 403 KNHPQYAWKKVAELQG 418 (543)
T ss_dssp TTCTTTBTSEEEEEEC
T ss_pred CCCchhcCeEEEEEEc
Confidence 2 3777766643
No 184
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=71.87 E-value=31 Score=35.81 Aligned_cols=25 Identities=24% Similarity=0.173 Sum_probs=16.5
Q ss_pred EECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 160 LVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 160 ~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
...++.+++.|+.++ .+.++|+.+.
T Consensus 147 ~spdg~~l~sgs~dg-----~v~iwd~~~~ 171 (357)
T 4g56_B 147 VFSDGTQAVSGGKDF-----SVKVWDLSQK 171 (357)
T ss_dssp ECSSSSEEEEEETTS-----CEEEEETTTT
T ss_pred ECCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 334456667777654 3778898876
No 185
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=71.67 E-value=91 Score=31.67 Aligned_cols=138 Identities=14% Similarity=0.051 Sum_probs=66.5
Q ss_pred CcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCc
Q 004198 126 DDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSA 205 (769)
Q Consensus 126 ~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~ 205 (769)
..+.++|+.+. +-..... + ....-.++....+..+++.|+.++ .+.++|+.+.... ..+.. ..
T Consensus 164 ~~i~~wd~~~~--~~~~~~~-~---h~~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~~~~~~~-~~~~~-----h~ 226 (340)
T 1got_B 164 TTCALWDIETG--QQTTTFT-G---HTGDVMSLSLAPDTRLFVSGACDA-----SAKLWDVREGMCR-QTFTG-----HE 226 (340)
T ss_dssp SCEEEEETTTT--EEEEEEC-C---CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCSEE-EEECC-----CS
T ss_pred CcEEEEECCCC--cEEEEEc-C---CCCceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCeeE-EEEcC-----Cc
Confidence 44889999883 3322211 1 111122333444556777777665 4778888765211 11111 11
Q ss_pred ccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccce-EEEEe-CCEEEEEecccCCCCc
Q 004198 206 RMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQH-AAVFV-GARLHVTGGALRGGRA 283 (769)
Q Consensus 206 r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~h-s~~~~-~~~i~V~GG~~~~~~~ 283 (769)
..-.+.....++.+++.|+.++ .+..+|..... -..... . +.....- ++++. ++.+++.|+..
T Consensus 227 ~~v~~v~~~p~~~~l~s~s~d~------~v~iwd~~~~~-~~~~~~-~--~~~~~~v~~~~~s~~g~~l~~g~~d----- 291 (340)
T 1got_B 227 SDINAICFFPNGNAFATGSDDA------TCRLFDLRADQ-ELMTYS-H--DNIICGITSVSFSKSGRLLLAGYDD----- 291 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTS------CEEEEETTTTE-EEEEEC-C--TTCCSCEEEEEECTTSSEEEEEETT-----
T ss_pred CCEEEEEEcCCCCEEEEEcCCC------cEEEEECCCCc-EEEEEc-c--CCcccceEEEEECCCCCEEEEECCC-----
Confidence 1123344456777888887543 24455554331 111111 1 0111111 22222 56777777632
Q ss_pred ccCCCcEEEEECCCCc
Q 004198 284 IEGEAAVAVLDTAAGV 299 (769)
Q Consensus 284 ~~~~~~v~~yd~~t~~ 299 (769)
..+.+||..+.+
T Consensus 292 ----~~i~vwd~~~~~ 303 (340)
T 1got_B 292 ----FNCNVWDALKAD 303 (340)
T ss_dssp ----SEEEEEETTTCC
T ss_pred ----CeEEEEEcccCc
Confidence 358899986653
No 186
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=71.57 E-value=78 Score=30.86 Aligned_cols=181 Identities=10% Similarity=-0.038 Sum_probs=89.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+++||+. ++++.+.... ....-++++.. ++.+|+.... ...++++|+ + .+...+.... ...
T Consensus 78 ~~i~~~~~~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~--g~~~~~~~~~---~~~ 141 (299)
T 2z2n_A 78 NKIGRITKK-GIIKEYTLPN---PDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-D--GKIREYELPN---KGS 141 (299)
T ss_dssp TEEEEECTT-SCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-T--CCEEEEECSS---TTC
T ss_pred CeEEEECCC-CcEEEEeCCC---cCCCceeeEECCCCCEEEEecC------CceEEEECC-C--CCEEEecCCC---CCC
Confidence 458888886 5565554210 11222344443 4578886432 245899998 5 2344442111 112
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCccc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLA 233 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~ 233 (769)
.-+.++...++.+|+.... .+.+++||+ +. +...+.... ....-...+...++.+|+.... .+
T Consensus 142 ~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g--~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~ 204 (299)
T 2z2n_A 142 YPSFITLGSDNALWFTENQ-----NNAIGRITE-SG--DITEFKIPT---PASGPVGITKGNDDALWFVEII------GN 204 (299)
T ss_dssp CEEEEEECTTSCEEEEETT-----TTEEEEECT-TC--CEEEEECSS---TTCCEEEEEECTTSSEEEEETT------TT
T ss_pred CCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CC--cEEEeeCCC---CCCcceeEEECCCCCEEEEccC------Cc
Confidence 2334444445577775421 246899999 55 444432111 1111123444456778876421 24
Q ss_pred ceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEec
Q 004198 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303 (769)
Q Consensus 234 d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~ 303 (769)
.++.++. ++.+.-...+.. . ..-+++++- ++.+||.... .+.+.+||+ +.+...+
T Consensus 205 ~i~~~~~--~g~~~~~~~~~~--~-~~~~~i~~~~~g~l~v~~~~---------~~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 205 KIGRITT--SGEITEFKIPTP--N-ARPHAITAGAGIDLWFTEWG---------ANKIGRLTS-NNIIEEY 260 (299)
T ss_dssp EEEEECT--TCCEEEEECSST--T-CCEEEEEECSTTCEEEEETT---------TTEEEEEET-TTEEEEE
T ss_pred eEEEECC--CCcEEEEECCCC--C-CCceeEEECCCCCEEEeccC---------CceEEEECC-CCceEEE
Confidence 5777877 333332222211 1 112233333 5678876421 245899998 4454443
No 187
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=71.35 E-value=1.5e+02 Score=34.08 Aligned_cols=243 Identities=10% Similarity=-0.007 Sum_probs=114.5
Q ss_pred CCcEEEEECC---CCcEEEecCCCCCCccc-ccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC
Q 004198 74 TNSVHLYDVL---TRKWTRIRPAGEPPSPR-AAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG 147 (769)
Q Consensus 74 ~~dv~~yD~~---~~~W~~l~~~g~~P~~R-~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g 147 (769)
...+|+.+.. ...|+.+.........- .......+ +++.++++... .+.....++++|+.+. +......
T Consensus 132 ~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~-~G~e~~~i~v~dl~tg--~~~~~~~-- 206 (741)
T 1yr2_A 132 QSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQD-GGSDWRTVKFVGVADG--KPLADEL-- 206 (741)
T ss_dssp SCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEE-TTCSEEEEEEEETTTC--CEEEEEE--
T ss_pred EEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcC-CCCceEEEEEEECCCC--CCCCccC--
Confidence 4678999987 77888764321110000 11112222 44444443321 1222356999999984 3443311
Q ss_pred CCCCCccccEEEEECCcEEEEEecCCCC---------CccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCE
Q 004198 148 QGPGPRYGHVMDLVSQRYLVSVSGNDGK---------RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGM 218 (769)
Q Consensus 148 ~~p~~R~~hs~~~~~~~~l~v~GG~~~~---------~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~ 218 (769)
+.... ...+...++.|+ ++..+.. .....+|++++.+..-.=..+.... ..+..........+|+
T Consensus 207 --~~~~~-~~~~wspD~~l~-~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~--~~~~~~~~~~~SpDG~ 280 (741)
T 1yr2_A 207 --KWVKF-SGLAWLGNDALL-YSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATP--ELPKRGHGASVSSDGR 280 (741)
T ss_dssp --EEEES-CCCEESTTSEEE-EEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCT--TCTTCEEEEEECTTSC
T ss_pred --CCcee-ccEEEECCCEEE-EEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccC--CCCeEEEEEEECCCCC
Confidence 11111 122222333343 3333322 1245688888876521111221111 1122234444567886
Q ss_pred EEEEcccCCCCCcccceEEEecCCC-Cc-eEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECC
Q 004198 219 FLLCGGRDASGAPLADAYGLLMHRN-GQ-WEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTA 296 (769)
Q Consensus 219 l~v~GG~~~~~~~l~d~~~ld~~~~-~~-W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~ 296 (769)
.+++....... ..+++|.++.... .. |....... .... ....-.++.+|+...... ....++++|.+
T Consensus 281 ~l~~~~~~~~~-~~~~l~~~d~~~~~~~~~~~l~~~~---~~~~-~~~~~dg~~l~~~s~~~~------~~~~l~~~d~~ 349 (741)
T 1yr2_A 281 WVVITSSEGTD-PVNTVHVARVTNGKIGPVTALIPDL---KAQW-DFVDGVGDQLWFVSGDGA------PLKKIVRVDLS 349 (741)
T ss_dssp EEEEEEECTTC-SCCEEEEEEEETTEECCCEEEECSS---SSCE-EEEEEETTEEEEEECTTC------TTCEEEEEECS
T ss_pred EEEEEEEccCC-CcceEEEEECCCCCCcccEEecCCC---CceE-EEEeccCCEEEEEECCCC------CCCEEEEEeCC
Confidence 55554433211 2467888887542 12 44333211 1111 112234677777654321 13569999998
Q ss_pred C--CcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEecC
Q 004198 297 A--GVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAEN 360 (769)
Q Consensus 297 t--~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld~ 360 (769)
+ ..|+.+-.... ... ......+++|++....++ ...+|++++
T Consensus 350 ~~~~~~~~l~~~~~------------------~~l-~~~~~~~~~lv~~~~~dg---~~~l~~~~~ 393 (741)
T 1yr2_A 350 GSTPRFDTVVPESK------------------DNL-ESVGIAGNRLFASYIHDA---KSQVLAFDL 393 (741)
T ss_dssp SSSCEEEEEECCCS------------------SEE-EEEEEEBTEEEEEEEETT---EEEEEEEET
T ss_pred CCccccEEEecCCC------------------CeE-EEEEEECCEEEEEEEECC---EEEEEEEeC
Confidence 8 57988753321 111 122334778777766554 345677664
No 188
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=71.18 E-value=57 Score=32.50 Aligned_cols=48 Identities=27% Similarity=0.225 Sum_probs=29.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTND 136 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~ 136 (769)
+.+++||+.+.+....-..+.. -++++.. ++.||+.+ .+++++|+.+.
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~---------~~i~~~d~~~~ 164 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAPRQ-----ITMLAWARDGSKLYGLG---------RDLHVMDPEAG 164 (337)
T ss_dssp CEEEEEETTTTEEEEEEECCSS-----CCCEEECTTSSCEEEES---------SSEEEEETTTT
T ss_pred ceEEEEECCCCcEEEEEeCCCC-----cceeEECCCCCEEEEeC---------CeEEEEECCCC
Confidence 6899999988775543322211 1223322 34577762 45999999884
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=71.12 E-value=77 Score=30.57 Aligned_cols=177 Identities=12% Similarity=-0.004 Sum_probs=84.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+++||..+.....+...+ ...-++++.. ++.+|+... ...+++||+... ....+.. ....
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~----~~~p~~i~~~~~g~l~v~~~-------~~~i~~~d~~~~--~~~~~~~----~~~~ 108 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNG----LYQPQGLAVDGAGTVYVTDF-------NNRVVTLAAGSN--NQTVLPF----DGLN 108 (270)
T ss_dssp CEEEEECC-----EECCCCS----CCSCCCEEECTTCCEEEEET-------TTEEEEECTTCS--CCEECCC----CSCS
T ss_pred CcEEEecCCCcccceEeeCC----cCCcceeEECCCCCEEEEcC-------CCEEEEEeCCCc--eEeeeec----CCcC
Confidence 56888988776655443221 1122344443 356888654 135899998763 2222311 1112
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCccc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLA 233 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~ 233 (769)
.-+.+++..++.+|+.... .+.+++++..+. ........+ ...-...+...++.+|+.... .+
T Consensus 109 ~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~--~~~~~~~~~----~~~p~~i~~~~~g~l~v~~~~------~~ 171 (270)
T 1rwi_B 109 YPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSK--TQTVLPFTG----LNDPDGVAVDNSGNVYVTDTD------NN 171 (270)
T ss_dssp SEEEEEECTTCCEEEEEGG-----GTEEEEECTTCC--SCEECCCCS----CCSCCCEEECTTCCEEEEEGG------GT
T ss_pred CCcceEECCCCCEEEEECC-----CCEEEEEECCCc--eeEeecccc----CCCceeEEEeCCCCEEEEECC------CC
Confidence 2234444445567776432 245888877654 222221111 111133444457788886532 23
Q ss_pred ceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 234 d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
.++.++..... ........ . ..-.+.++- ++.+||.... .+.+.+||+.+..
T Consensus 172 ~i~~~~~~~~~--~~~~~~~~--~-~~p~~i~~d~~g~l~v~~~~---------~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 172 RVVKLEAESNN--QVVLPFTD--I-TAPWGIAVDEAGTVYVTEHN---------TNQVVKLLAGSTT 224 (270)
T ss_dssp EEEEECTTTCC--EEECCCSS--C-CSEEEEEECTTCCEEEEETT---------TSCEEEECTTCSC
T ss_pred EEEEEecCCCc--eEeecccC--C-CCceEEEECCCCCEEEEECC---------CCcEEEEcCCCCc
Confidence 57777766432 11111111 1 122334443 4578887531 2358999987654
No 190
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=70.64 E-value=46 Score=34.43 Aligned_cols=56 Identities=11% Similarity=-0.023 Sum_probs=28.7
Q ss_pred CcEEEEEccCCcceEEEe-eecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 126 DDLYVLDLTNDKFKWHRV-VVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 126 ~dl~~~d~~t~~~~W~~~-~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
..+.++|+.+........ ...+ ....-.++++..++.+++.|+.++ .+.++|+.++
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~---H~~~V~~v~~spdg~~l~sgs~d~-----~i~iwd~~~~ 159 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYE---HDDIVSTVSVLSSGTQAVSGSKDI-----CIKVWDLAQQ 159 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEEC---CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTT
T ss_pred CEEEEEeccCCCceeEeeccccC---CCCCEEEEEECCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 348888988743222111 0001 011112333344556777777665 4788898876
No 191
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=70.46 E-value=1.1e+02 Score=32.26 Aligned_cols=96 Identities=10% Similarity=0.097 Sum_probs=45.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
+.+..+|..+.+-...-. + ....-.+++...+..++.|+. ...+.++|+.+.. -.... .....+..
T Consensus 142 g~i~vwd~~~~~~~~~~~-~---h~~~V~~l~~~~~~~l~s~s~------dg~i~vwd~~~~~--~~~~~--~~h~~~v~ 207 (464)
T 3v7d_B 142 KMIRVYDSINKKFLLQLS-G---HDGGVWALKYAHGGILVSGST------DRTVRVWDIKKGC--CTHVF--EGHNSTVR 207 (464)
T ss_dssp SCEEEEETTTTEEEEEEC-C---CSSCEEEEEECSTTEEEEEET------TSCEEEEETTTTE--EEEEE--CCCSSCEE
T ss_pred CcEEEEECCCCcEEEEEe-C---CCcCEEEEEEcCCCEEEEEeC------CCCEEEEECCCCc--EEEEE--CCCCCccE
Confidence 578899998776332211 1 001112222222335555653 2348999998842 22221 11111111
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
........+..+++.|+.++ .+.++|+.+.
T Consensus 208 ~l~~~~~~~~~~l~s~s~d~-----~i~vwd~~~~ 237 (464)
T 3v7d_B 208 CLDIVEYKNIKYIVTGSRDN-----TLHVWKLPKE 237 (464)
T ss_dssp EEEEEESSSCEEEEEEETTS-----CEEEEECCCC
T ss_pred EEEEecCCCCCEEEEEcCCC-----cEEEeeCCCC
Confidence 11111114557777777654 3667777654
No 192
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=70.01 E-value=1.2e+02 Score=32.17 Aligned_cols=94 Identities=9% Similarity=0.045 Sum_probs=45.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+.++|+.++....+....... ....+++.. ++.+++.|+. ...+.++|+.... -..+ ..-.
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~~------dg~i~~wd~~~~~--~~~~------~~h~ 250 (435)
T 4e54_B 187 GTTRLQDFKGNILRVFASSDTIN--IWFCSLDVSASSRMVVTGDN------VGNVILLNMDGKE--LWNL------RMHK 250 (435)
T ss_dssp SCEEEEETTSCEEEEEECCSSCS--CCCCCEEEETTTTEEEEECS------SSBEEEEESSSCB--CCCS------BCCS
T ss_pred CEEEEeeccCCceeEEeccCCCC--ccEEEEEECCCCCEEEEEeC------CCcEeeeccCcce--eEEE------eccc
Confidence 45778899887766554332111 111222222 4456666653 2358888986521 1111 1111
Q ss_pred cccEEEEE--CCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 154 YGHVMDLV--SQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 154 ~~hs~~~~--~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
..-..+.+ .+..+++.|+.++ .+.+||+.+.
T Consensus 251 ~~v~~v~~~p~~~~~~~s~s~d~-----~v~iwd~~~~ 283 (435)
T 4e54_B 251 KKVTHVALNPCCDWFLATASVDQ-----TVKIWDLRQV 283 (435)
T ss_dssp SCEEEEEECTTCSSEEEEEETTS-----BCCEEETTTC
T ss_pred ceEEeeeecCCCceEEEEecCcc-----eeeEEecccc
Confidence 11122233 3345677777654 3567777654
No 193
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=69.87 E-value=1.2e+02 Score=32.23 Aligned_cols=40 Identities=8% Similarity=-0.029 Sum_probs=23.3
Q ss_pred eEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 262 HAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 262 hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
.++++..+.+++..+...........-.+|.++.+++.|+
T Consensus 358 ~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 358 ISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp EEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred EEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 3555556777777664322211112346788888888886
No 194
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=69.22 E-value=1.3e+02 Score=34.12 Aligned_cols=60 Identities=12% Similarity=0.001 Sum_probs=32.3
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEe
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRV 143 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~ 143 (769)
..+++.+|+.+++-+.+..... ...+....+..-+++.++++.. .++|++|..+. +..++
T Consensus 90 ~~~i~~~d~~~~~~~~l~~~~~-~~~~~~~~~~SPdG~~la~~~~-------~~i~~~~~~~g--~~~~~ 149 (723)
T 1xfd_A 90 TGYYVLSKIPHGDPQSLDPPEV-SNAKLQYAGWGPKGQQLIFIFE-------NNIYYCAHVGK--QAIRV 149 (723)
T ss_dssp CSEEEEEESSSCCCEECCCTTC-CSCCCSBCCBCSSTTCEEEEET-------TEEEEESSSSS--CCEEE
T ss_pred eeeEEEEECCCCceEeccCCcc-ccccccccEECCCCCEEEEEEC-------CeEEEEECCCC--ceEEE
Confidence 4789999999988766654321 1111222222223433333321 36899998873 34444
No 195
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=68.75 E-value=3.1 Score=44.00 Aligned_cols=66 Identities=20% Similarity=0.201 Sum_probs=37.5
Q ss_pred CEEEEccCCCCH----------------HHHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChH--------------
Q 004198 582 PVKVFGDLHGQF----------------GDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSL-------------- 631 (769)
Q Consensus 582 ~i~viGDiHG~~----------------~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~-------------- 631 (769)
.|+...|+||++ ..+..+++........ .-+|..||.+...+.+-
T Consensus 13 ~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~-----~llld~GD~~qGs~~~~~~~~~~~~~g~~~g 87 (341)
T 3gve_A 13 SILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPN-----TLLVDNGDLIQGNPLGEYAVKYQKDDIISGT 87 (341)
T ss_dssp EEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSS-----EEEEECSCCSCSSHHHHHHHHHHHHHHHHTS
T ss_pred EEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCC-----EEEEecCccCCCcHHHHHhhhcccccccccc
Confidence 388899999986 3345555544311111 13445899997654321
Q ss_pred ---HHHHHHHHhhhcCCCceEEecCCcch
Q 004198 632 ---ETITLLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 632 ---e~l~ll~~lk~~~p~~v~llrGNHE~ 657 (769)
.++.+|..+. -. .+..||||.
T Consensus 88 ~~~~~~~~ln~lg----~D-a~tlGNHEf 111 (341)
T 3gve_A 88 KTHPIISVMNALK----YD-AGTLGNHEF 111 (341)
T ss_dssp SCCHHHHHHHHTT----CC-BEECCGGGG
T ss_pred cccHHHHHHHhhC----CC-eeeccchhh
Confidence 2444554443 12 356799995
No 196
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=68.38 E-value=2.6 Score=47.84 Aligned_cols=70 Identities=19% Similarity=0.195 Sum_probs=37.6
Q ss_pred CEEEEccCCCCHH-------------HHHHHHHHhCCCC-CCCCCcceeEEEeccccCCCCC-------hHHHHHHHHHh
Q 004198 582 PVKVFGDLHGQFG-------------DLMRLFDEYGFPS-TAGDITYIDYLFLGDYVDRGQH-------SLETITLLLAL 640 (769)
Q Consensus 582 ~i~viGDiHG~~~-------------~l~~~l~~~~~~~-~~~~~~~~~~vfLGD~vDrG~~-------s~e~l~ll~~l 640 (769)
.|+.++|+||.+. .+.++...+.-.. ..+ +..-+|..||+++..+. ...++.+|..+
T Consensus 17 ~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~--~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~l 94 (557)
T 3c9f_A 17 NFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRN--QDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQ 94 (557)
T ss_dssp EEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTT--CEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTS
T ss_pred EEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcC--CCEEEEecCCCCCCccchhhcccCCHHHHHHHHhc
Confidence 4888999999742 2444432221100 000 01135669999976432 22345555544
Q ss_pred hhcCCCceEEecCCcchh
Q 004198 641 KIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 641 k~~~p~~v~llrGNHE~~ 658 (769)
. --.+..||||.-
T Consensus 95 g-----~Da~tlGNHEfD 107 (557)
T 3c9f_A 95 D-----YDLLTIGNHELY 107 (557)
T ss_dssp C-----CSEECCCGGGSS
T ss_pred C-----CCEEeecchhcc
Confidence 3 235677999963
No 197
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=67.26 E-value=1.2e+02 Score=31.45 Aligned_cols=129 Identities=12% Similarity=0.120 Sum_probs=59.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+.++|+.+.+-...-.. ....-.+++.. ++..++.|+. ...+.++|+.+. +...... .. .
T Consensus 145 ~~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~p~~~~l~s~s~------d~~v~iwd~~~~--~~~~~~~---~~--~ 207 (393)
T 1erj_A 145 RLIRIWDIENRKIVMILQG----HEQDIYSLDYFPSGDKLVSGSG------DRTVRIWDLRTG--QCSLTLS---IE--D 207 (393)
T ss_dssp SCEEEEETTTTEEEEEECC----CSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTT--EEEEEEE---CS--S
T ss_pred CeEEEEECCCCcEEEEEcc----CCCCEEEEEEcCCCCEEEEecC------CCcEEEEECCCC--eeEEEEE---cC--C
Confidence 4688889988765433211 00111122222 3334444543 245889999883 3332211 11 1
Q ss_pred cccEEEEEC-CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCC--CCcccccEEEEecCCEEEEEcccC
Q 004198 154 YGHVMDLVS-QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDR--PSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 154 ~~hs~~~~~-~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~--P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
.-.+++... ++.+++.|+.++ .+.+||+.+... -..+...... .....-.+.....++.+++.|+.+
T Consensus 208 ~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~-~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d 277 (393)
T 1erj_A 208 GVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFL-VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 277 (393)
T ss_dssp CEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCE-EEEEC------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcE-EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 112222222 456777777664 377888877521 1122111000 011111233344677777777754
No 198
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=66.97 E-value=88 Score=31.16 Aligned_cols=95 Identities=14% Similarity=0.098 Sum_probs=45.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
+.+..+|..+.+-...-.....+ .......-++..++.|+. ...+.++|+.+.. .-..+. + ....
T Consensus 35 g~v~lWd~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~s~s~------d~~i~vwd~~~~~-~~~~~~--~---h~~~ 99 (304)
T 2ynn_A 35 GRVELWNYETQVEVRSIQVTETP---VRAGKFIARKNWIIVGSD------DFRIRVFNYNTGE-KVVDFE--A---HPDY 99 (304)
T ss_dssp SEEEEEETTTTEEEEEEECCSSC---EEEEEEEGGGTEEEEEET------TSEEEEEETTTCC-EEEEEE--C---CSSC
T ss_pred CcEEEEECCCCceeEEeeccCCc---EEEEEEeCCCCEEEEECC------CCEEEEEECCCCc-EEEEEe--C---CCCc
Confidence 56888899887543221110011 111111123444555553 2458899998743 112221 1 1111
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
-.+++...++.+++.|+.++ .+.++|+.++
T Consensus 100 v~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~ 129 (304)
T 2ynn_A 100 IRSIAVHPTKPYVLSGSDDL-----TVKLWNWENN 129 (304)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CEEEEEGGGT
T ss_pred EEEEEEcCCCCEEEEECCCC-----eEEEEECCCC
Confidence 22333444446677777665 3677777654
No 199
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=66.69 E-value=85 Score=32.03 Aligned_cols=133 Identities=8% Similarity=0.114 Sum_probs=59.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+.++|..+++|......... . ...-.++.. ++..++.|+.+ ..+.++|..+. .+..+.... . ..
T Consensus 38 ~~i~iw~~~~~~~~~~~~~~~~-h-~~~v~~~~~sp~g~~l~s~s~D------~~v~iw~~~~~--~~~~~~~~~-~-h~ 105 (345)
T 3fm0_A 38 RRIRIWGTEGDSWICKSVLSEG-H-QRTVRKVAWSPCGNYLASASFD------ATTCIWKKNQD--DFECVTTLE-G-HE 105 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECSS-C-SSCEEEEEECTTSSEEEEEETT------SCEEEEEECCC---EEEEEEEC-C-CS
T ss_pred CeEEEEEcCCCcceeeeeeccc-c-CCcEEEEEECCCCCEEEEEECC------CcEEEEEccCC--CeEEEEEcc-C-CC
Confidence 4678888888887643211000 0 111122222 34555556542 34677777763 343332100 0 01
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCC
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDA 227 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~ 227 (769)
..-.++....++.+++.|+.++ .+.++|+.+.. .+..+..... ......+.....++.+++.|+.+.
T Consensus 106 ~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~~-~~~~~~~~~~--h~~~v~~~~~~p~~~~l~s~s~d~ 172 (345)
T 3fm0_A 106 NEVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEED-EYECVSVLNS--HTQDVKHVVWHPSQELLASASYDD 172 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEEECTTS-CEEEEEEECC--CCSCEEEEEECSSSSCEEEEETTS
T ss_pred CCceEEEEeCCCCEEEEEECCC-----eEEEEECCCCC-CeEEEEEecC--cCCCeEEEEECCCCCEEEEEeCCC
Confidence 1112333334456777777664 36677765431 2322221100 111112333446777777777653
No 200
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=66.53 E-value=1.2e+02 Score=31.04 Aligned_cols=181 Identities=11% Similarity=0.020 Sum_probs=87.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+.+||+.+.+........ .....-.+++.. ++.+++.|+. ...+.++|+.+ .....+.. .....
T Consensus 96 g~i~iwd~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~------d~~i~iwd~~~--~~~~~~~~--~~~~~ 163 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGM--GPGDAITGMKFNQFNTNQLFVSSI------RGATTLRDFSG--SVIQVFAK--TDSWD 163 (383)
T ss_dssp SCEEEEETTSTTCEEEECCC--STTCBEEEEEEETTEEEEEEEEET------TTEEEEEETTS--CEEEEEEC--CCCSS
T ss_pred CeEEEEeCCCcccceeeecC--CcCCceeEEEeCCCCCCEEEEEeC------CCEEEEEECCC--CceEEEec--cCCCC
Confidence 56889999988776553320 011111222332 2356666653 24588999987 44555532 11111
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCE-EEEEcccCCCCCc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGM-FLLCGGRDASGAP 231 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~-l~v~GG~~~~~~~ 231 (769)
..-.++....+..+++.|+.++ .+.+||+... .-..+... ...-.+.....++. +++.|+.+.
T Consensus 164 ~~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~--~~~~~~~h-----~~~v~~~~~~~~~~~~l~s~~~d~---- 227 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGDSTG-----RLLLLGLDGH--EIFKEKLH-----KAKVTHAEFNPRCDWLMATSSVDA---- 227 (383)
T ss_dssp CCEEEEEEETTTTEEEEEETTS-----EEEEEETTSC--EEEEEECS-----SSCEEEEEECSSCTTEEEEEETTS----
T ss_pred CCeEEEEECCCCCEEEEECCCC-----CEEEEECCCC--EEEEeccC-----CCcEEEEEECCCCCCEEEEEeCCC----
Confidence 1222333444446667777553 5888888544 33333221 11122333445555 667776542
Q ss_pred ccceEEEecCCC---CceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 232 LADAYGLLMHRN---GQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 232 l~d~~~ld~~~~---~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
.+..++..+. +...... + ....-.++++. ++..++.|+.. ..+.+||+.+.+
T Consensus 228 --~i~iwd~~~~~~~~~~~~~~--~---~~~~v~~~~~s~~~~~~l~~~~~d---------~~i~iwd~~~~~ 284 (383)
T 3ei3_B 228 --TVKLWDLRNIKDKNSYIAEM--P---HEKPVNAAYFNPTDSTKLLTTDQR---------NEIRVYSSYDWS 284 (383)
T ss_dssp --EEEEEEGGGCCSTTCEEEEE--E---CSSCEEEEEECTTTSCEEEEEESS---------SEEEEEETTBTT
T ss_pred --EEEEEeCCCCCcccceEEEe--c---CCCceEEEEEcCCCCCEEEEEcCC---------CcEEEEECCCCc
Confidence 3555555431 1111111 0 01111223332 46677777632 358899987653
No 201
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=66.37 E-value=1.2e+02 Score=31.04 Aligned_cols=106 Identities=15% Similarity=0.049 Sum_probs=52.1
Q ss_pred cEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCC
Q 004198 164 RYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN 243 (769)
Q Consensus 164 ~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~ 243 (769)
+.+++.|+.++ .+.++|+.+. +....-.. ....-.+.....++.+++.|+.+. .+..+|....
T Consensus 210 g~~l~sgs~Dg-----~v~~wd~~~~--~~~~~~~~----h~~~v~~v~~~p~~~~l~s~s~D~------~v~lwd~~~~ 272 (354)
T 2pbi_B 210 GNTFVSGGCDK-----KAMVWDMRSG--QCVQAFET----HESDVNSVRYYPSGDAFASGSDDA------TCRLYDLRAD 272 (354)
T ss_dssp CCEEEEEETTS-----CEEEEETTTC--CEEEEECC----CSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTT
T ss_pred CCEEEEEeCCC-----eEEEEECCCC--cEEEEecC----CCCCeEEEEEeCCCCEEEEEeCCC------eEEEEECCCC
Confidence 35677777664 4788888776 33222111 111112333446777778877643 2444555433
Q ss_pred CceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 244 GQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 244 ~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
.-...... .........+.+ ++.+++.|+.. ..+.+||..+.+
T Consensus 273 ---~~~~~~~~-~~~~~~~~~~~~s~~g~~l~~g~~d---------~~i~vwd~~~~~ 317 (354)
T 2pbi_B 273 ---REVAIYSK-ESIIFGASSVDFSLSGRLLFAGYND---------YTINVWDVLKGS 317 (354)
T ss_dssp ---EEEEEECC-TTCCSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTCS
T ss_pred ---cEEEEEcC-CCcccceeEEEEeCCCCEEEEEECC---------CcEEEEECCCCc
Confidence 11111010 111122222222 56677777632 358899986654
No 202
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=65.88 E-value=4.1 Score=42.99 Aligned_cols=66 Identities=17% Similarity=0.067 Sum_probs=36.8
Q ss_pred CEEEEccCCCCHH----------------HHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCChH-------------H
Q 004198 582 PVKVFGDLHGQFG----------------DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSL-------------E 632 (769)
Q Consensus 582 ~i~viGDiHG~~~----------------~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~s~-------------e 632 (769)
.|+-..|+||++. .+..++++....... .-+|.-||.+...+.+- .
T Consensus 10 ~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n-----~llld~GD~~qGs~~~~~~~~~~~~~g~~~p 84 (339)
T 3jyf_A 10 RIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKN-----SVLVDNGDVIQGSPLGDYMAAKGLKEGDVHP 84 (339)
T ss_dssp EEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSC-----EEEEECSCCSSSSHHHHHHHHHCCCTTCCCH
T ss_pred EEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCC-----EEEEECCCCCCCchhHHhhhhcccccccchH
Confidence 3888999999863 344555554321111 13455999997443221 2
Q ss_pred HHHHHHHhhhcCCCceEEecCCcch
Q 004198 633 TITLLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 633 ~l~ll~~lk~~~p~~v~llrGNHE~ 657 (769)
++.+|..+. -. .+..||||.
T Consensus 85 ~~~~mn~lg----~D-~~t~GNHEf 104 (339)
T 3jyf_A 85 VYKAMNTLN----YA-VGNLGNHEF 104 (339)
T ss_dssp HHHHHTTSC----CS-EEECCGGGG
T ss_pred HHHHHHhcC----CC-EEecchhhh
Confidence 344444332 23 455699995
No 203
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=65.75 E-value=4.3 Score=41.54 Aligned_cols=66 Identities=18% Similarity=0.219 Sum_probs=38.8
Q ss_pred CCEEEEccCCCCHH--HHHHHHHHhCCC-CCCCCCcceeEEEeccccCCC-CChHHHHHHHHHhhhcCCCceEEecCCcc
Q 004198 581 APVKVFGDLHGQFG--DLMRLFDEYGFP-STAGDITYIDYLFLGDYVDRG-QHSLETITLLLALKIEYPENVHLIRGNHE 656 (769)
Q Consensus 581 ~~i~viGDiHG~~~--~l~~~l~~~~~~-~~~~~~~~~~~vfLGD~vDrG-~~s~e~l~ll~~lk~~~p~~v~llrGNHE 656 (769)
-.|.++|||||... .+...++.+.-. ..+ -+++-||-.--| +.+..+...|..+.. . .+-.||||
T Consensus 5 m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d------~vi~Ngen~~gG~g~~~~~~~~ln~~G~----D-a~TlGNHe 73 (281)
T 1t71_A 5 IKFIFLGDVYGKAGRNIIKNNLAQLKSKYQAD------LVIVNAENTTHGKGLSLKHYEFLKEAGV----N-YITMGNHT 73 (281)
T ss_dssp CEEEEECEEBHHHHHHHHHTTHHHHHHHHTCS------EEEEECTBTTTTSSCCHHHHHHHHHHTC----C-EEECCTTT
T ss_pred EEEEEECCcCChHHHHHHHHHHHHHHHhcCCC------EEEEcCCCCCCCCCcCHHHHHHHHhcCC----C-EEEEccCc
Confidence 35899999999853 233344433210 011 345555555433 456778888877752 3 44559999
Q ss_pred h
Q 004198 657 A 657 (769)
Q Consensus 657 ~ 657 (769)
.
T Consensus 74 f 74 (281)
T 1t71_A 74 W 74 (281)
T ss_dssp T
T ss_pred c
Confidence 6
No 204
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=65.08 E-value=3.3 Score=46.99 Aligned_cols=36 Identities=14% Similarity=-0.026 Sum_probs=24.0
Q ss_pred eEEEeccccCCCCCh-----HHHHHHHHHhhhcCCCceEEecCCcch
Q 004198 616 DYLFLGDYVDRGQHS-----LETITLLLALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 616 ~~vfLGD~vDrG~~s-----~e~l~ll~~lk~~~p~~v~llrGNHE~ 657 (769)
-+|..||++++.+.+ ..++.+|..+. + .+ +. ||||.
T Consensus 126 Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg--~--d~-~~-GNHEf 166 (562)
T 2wdc_A 126 LVLDGGDTWTNSGLSLLTRGEAVVRWQNLVG--V--DH-MV-SHWEW 166 (562)
T ss_dssp EEEECSCCSSSSHHHHHHTTHHHHHHHHHHT--C--CE-EC-CSGGG
T ss_pred EEEeCCCCCCcchhhhhhCCHHHHHHHHhhC--C--cE-Ee-cchhc
Confidence 456699999976533 35566666664 2 23 57 99995
No 205
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=63.71 E-value=1.2e+02 Score=33.37 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=52.8
Q ss_pred EEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecC-CEEEEEcccCCCCCcccceEEEecCCCC
Q 004198 166 LVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSD-GMFLLCGGRDASGAPLADAYGLLMHRNG 244 (769)
Q Consensus 166 l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~-g~l~v~GG~~~~~~~l~d~~~ld~~~~~ 244 (769)
+++.|+.++ .+.+||..+. +-...-.. .......-.+.....+ +.+++.|+.++ .+..++..+.
T Consensus 175 ~l~~~~~d~-----~v~vwd~~~~--~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~- 239 (615)
T 1pgu_A 175 RSMTVGDDG-----SVVFYQGPPF--KFSASDRT-HHKQGSFVRDVEFSPDSGEFVITVGSDR------KISCFDGKSG- 239 (615)
T ss_dssp EEEEEETTT-----EEEEEETTTB--EEEEEECS-SSCTTCCEEEEEECSTTCCEEEEEETTC------CEEEEETTTC-
T ss_pred EEEEEeCCC-----cEEEEeCCCc--ceeeeecc-cCCCCceEEEEEECCCCCCEEEEEeCCC------eEEEEECCCC-
Confidence 666676553 5778888765 22221111 0000002233444566 77777777542 4566666533
Q ss_pred ceEEEeCCC-CCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 245 QWEWTLAPG-VAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 245 ~W~W~~~~~-~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
......... ....... .++++.++..++.|+.. ..+.+||+.+.+-.
T Consensus 240 ~~~~~~~~~~~~~~~~v-~~~~~~~~~~l~~~~~d---------~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 240 EFLKYIEDDQEPVQGGI-FALSWLDSQKFATVGAD---------ATIRVWDVTTSKCV 287 (615)
T ss_dssp CEEEECCBTTBCCCSCE-EEEEESSSSEEEEEETT---------SEEEEEETTTTEEE
T ss_pred CEeEEecccccccCCce-EEEEEcCCCEEEEEcCC---------CcEEEEECCCCcEE
Confidence 112111010 0011111 12222267777777632 35889999876543
No 206
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=63.45 E-value=63 Score=36.00 Aligned_cols=130 Identities=15% Similarity=0.141 Sum_probs=62.2
Q ss_pred CcEEEEECCCCcEEE-ecCCCC-------CCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceE-EEee
Q 004198 75 NSVHLYDVLTRKWTR-IRPAGE-------PPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKW-HRVV 144 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~-l~~~g~-------~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W-~~~~ 144 (769)
+.+.++|..+.+-.+ +...+. .|.+|........ +..+|+-.. ..+.++++|..+.+... ..+.
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~------~~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK------ETGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET------TTTEEEEEECTTSSSCEEEEEE
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC------CCCeEEEEEecCCCcceeEEec
Confidence 567788888766332 332211 1222333333333 345555432 23569999998743222 1222
Q ss_pred ecCCCCCCccccEEEEECCc-EEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecC-CEEEEE
Q 004198 145 VQGQGPGPRYGHVMDLVSQR-YLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSD-GMFLLC 222 (769)
Q Consensus 145 ~~g~~p~~R~~hs~~~~~~~-~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~-g~l~v~ 222 (769)
..+.-|..++..++ ++|+.+.. .+.+.++|+.+. +-...-..+..|.+..... ....+ +.+|+.
T Consensus 322 ------~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~tg--~l~~~i~~g~~ph~g~g~~-~~~p~~g~~~~s 387 (543)
T 1nir_A 322 ------AAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKDR--RLSALVDVGKTPHPGRGAN-FVHPKYGPVWST 387 (543)
T ss_dssp ------CCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTTT--EEEEEEECSSSBCCTTCEE-EEETTTEEEEEE
T ss_pred ------cCcCccCceECCCCCEEEEEecC-----CCeEEEEECCCC--eEEEeeccCCCCCCCCCcc-cCCCCCccEEEe
Confidence 23334444444333 45554322 346888999887 4333222233344322222 23344 677776
Q ss_pred cc
Q 004198 223 GG 224 (769)
Q Consensus 223 GG 224 (769)
+.
T Consensus 388 ~~ 389 (543)
T 1nir_A 388 SH 389 (543)
T ss_dssp EB
T ss_pred cc
Confidence 54
No 207
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=63.40 E-value=1.4e+02 Score=30.58 Aligned_cols=77 Identities=9% Similarity=0.076 Sum_probs=37.4
Q ss_pred EEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCC-CCCCCcccccEEEEecCCEEEEEcccCCCCCcccce
Q 004198 157 VMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPE-GDRPSARMYATASARSDGMFLLCGGRDASGAPLADA 235 (769)
Q Consensus 157 s~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~-~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~ 235 (769)
++....+. +++.|+.++ .+.+||+.+...... +... +..+....-.+.....++.+++.|+.+.. ...+
T Consensus 191 ~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~~~~~~-~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~---~g~i 260 (397)
T 1sq9_A 191 SVDISERG-LIATGFNNG-----TVQISELSTLRPLYN-FESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS---FGCI 260 (397)
T ss_dssp EEEECTTS-EEEEECTTS-----EEEEEETTTTEEEEE-EECCC---CCCCCEEEEEECSSTTEEEEEEEETT---EEEE
T ss_pred EEEECCCc-eEEEEeCCC-----cEEEEECCCCceeEE-EeccccccccCCccceEEECCCCCEEEEEecCCC---CceE
Confidence 44455555 777777554 588899887621211 1110 00000112233344456777777765311 1346
Q ss_pred EEEecCCC
Q 004198 236 YGLLMHRN 243 (769)
Q Consensus 236 ~~ld~~~~ 243 (769)
..|+..+.
T Consensus 261 ~i~d~~~~ 268 (397)
T 1sq9_A 261 TLYETEFG 268 (397)
T ss_dssp EEEETTTC
T ss_pred EEEECCCC
Confidence 66676543
No 208
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=63.39 E-value=1.3e+02 Score=30.18 Aligned_cols=191 Identities=9% Similarity=0.049 Sum_probs=86.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+.+||+.+.+-...-.. ....-.++.+ ++..++.|+. ...+.+||+.+.. ...... . .
T Consensus 54 g~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~--~~~~~~---~--~ 115 (369)
T 3zwl_B 54 SSASVWYSLNGERLGTLDG-----HTGTIWSIDVDCFTKYCVTGSA------DYSIKLWDVSNGQ--CVATWK---S--P 115 (369)
T ss_dssp SCEEEEETTTCCEEEEECC-----CSSCEEEEEECTTSSEEEEEET------TTEEEEEETTTCC--EEEEEE---C--S
T ss_pred CEEEEEeCCCchhhhhhhh-----cCCcEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCc--EEEEee---c--C
Confidence 5688899887764432211 0111122222 3445555553 2458999998843 322211 1 1
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCC--ceEEEcCCCCC-----CCCcccccEEEEecCCEEEEEccc
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKP--YVWQRLNPEGD-----RPSARMYATASARSDGMFLLCGGR 225 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~--~~W~~v~~~~~-----~P~~r~~hsa~~~~~g~l~v~GG~ 225 (769)
..-.++....+..+++.++.+.......+.+||+.+.. ..+........ ........++....++.+++.|+.
T Consensus 116 ~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 195 (369)
T 3zwl_B 116 VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK 195 (369)
T ss_dssp SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET
T ss_pred CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC
Confidence 11223334444455666655422223456666665431 12222211100 000002223334466667777664
Q ss_pred CCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 226 DASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 226 ~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
+ ..+..|+.............. . ..-.++++. ++..++.|+. ...+.+||..+.+...
T Consensus 196 d------g~i~i~d~~~~~~~~~~~~~~---~-~~v~~~~~~~~~~~l~~~~~---------d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 196 D------GKISKYDVSNNYEYVDSIDLH---E-KSISDMQFSPDLTYFITSSR---------DTNSFLVDVSTLQVLK 254 (369)
T ss_dssp T------SEEEEEETTTTTEEEEEEECC---S-SCEEEEEECTTSSEEEEEET---------TSEEEEEETTTCCEEE
T ss_pred C------CEEEEEECCCCcEeEEEEecC---C-CceeEEEECCCCCEEEEecC---------CceEEEEECCCCceee
Confidence 3 346667766522222111111 1 111223332 5666677653 2358999998765443
No 209
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=63.29 E-value=14 Score=38.68 Aligned_cols=69 Identities=16% Similarity=0.095 Sum_probs=33.9
Q ss_pred EEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCC
Q 004198 211 ASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEA 288 (769)
Q Consensus 211 a~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~ 288 (769)
.....++.+++.|+.+. .+..++..+. .-... ..+- .. .-.++++. ++.+++.||.. .
T Consensus 145 v~~spdg~~l~sgs~dg------~v~iwd~~~~-~~~~~-~~~h--~~-~v~~v~~s~~~~~~~~s~~~d---------g 204 (357)
T 4g56_B 145 LSVFSDGTQAVSGGKDF------SVKVWDLSQK-AVLKS-YNAH--SS-EVNCVAACPGKDTIFLSCGED---------G 204 (357)
T ss_dssp EEECSSSSEEEEEETTS------CEEEEETTTT-EEEEE-ECCC--SS-CEEEEEECTTCSSCEEEEETT---------S
T ss_pred EEECCCCCEEEEEeCCC------eEEEEECCCC-cEEEE-EcCC--CC-CEEEEEEccCCCceeeeeccC---------C
Confidence 33456777888887643 2455565543 11111 1110 11 11123332 33467777642 3
Q ss_pred cEEEEECCCCc
Q 004198 289 AVAVLDTAAGV 299 (769)
Q Consensus 289 ~v~~yd~~t~~ 299 (769)
.+.+||+.+.+
T Consensus 205 ~v~~wd~~~~~ 215 (357)
T 4g56_B 205 RILLWDTRKPK 215 (357)
T ss_dssp CEEECCTTSSS
T ss_pred ceEEEECCCCc
Confidence 47888887764
No 210
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=62.98 E-value=93 Score=34.43 Aligned_cols=183 Identities=13% Similarity=0.108 Sum_probs=86.2
Q ss_pred EEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcccc
Q 004198 77 VHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGH 156 (769)
Q Consensus 77 v~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~h 156 (769)
+..||+.+++-+++... +. ...+...-+..|+ +++..... ..++|++|+.+ .++..+. ..+. ...
T Consensus 134 ~~l~d~~~g~~~~l~~~---~~--~~~~~spDG~~la-~~~~~~~~--~~~i~~~d~~~--g~~~~l~---~~~~--~~~ 198 (582)
T 3o4h_A 134 VALYALDGGGLRELARL---PG--FGFVSDIRGDLIA-GLGFFGGG--RVSLFTSNLSS--GGLRVFD---SGEG--SFS 198 (582)
T ss_dssp EEEEEEETTEEEEEEEE---SS--CEEEEEEETTEEE-EEEEEETT--EEEEEEEETTT--CCCEEEC---CSSC--EEE
T ss_pred ceEEEccCCcEEEeecC---CC--ceEEECCCCCEEE-EEEEcCCC--CeEEEEEcCCC--CCceEee---cCCC--ccc
Confidence 44678888887777642 11 2222223344544 33332111 24599999988 4466662 1111 112
Q ss_pred EEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCC---CCcccccEEEEecCCEEEEEcccCCCCCcc
Q 004198 157 VMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDR---PSARMYATASARSDGMFLLCGGRDASGAPL 232 (769)
Q Consensus 157 s~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~---P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l 232 (769)
..+.. +++.|+ .+..++ ...++++|++++ +...+...... +............||.+++.+..++
T Consensus 199 ~~~~SpDG~~l~-~~~~~~---~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g----- 267 (582)
T 3o4h_A 199 SASISPGMKVTA-GLETAR---EARLVTVDPRDG--SVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG----- 267 (582)
T ss_dssp EEEECTTSCEEE-EEECSS---CEEEEEECTTTC--CEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT-----
T ss_pred cceECCCCCEEE-EccCCC---eeEEEEEcCCCC--cEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC-----
Confidence 33233 333454 443332 257999999887 55422211000 0000000111456776766655432
Q ss_pred cceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEec
Q 004198 233 ADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303 (769)
Q Consensus 233 ~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~ 303 (769)
.+..++. . +.... +.... .+.++-++++++.++.... ...++.+|..+ +.+.+
T Consensus 268 -~~~l~~~--g---~~~~~----~~~~v-~~~~~sdg~~l~~~s~~~~------p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 268 -RSAVFID--G---ERVEA----PQGNH-GRVVLWRGKLVTSHTSLST------PPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp -EEEEEET--T---EEECC----CSSEE-EEEEEETTEEEEEEEETTE------EEEEEEETTCC-EEECC
T ss_pred -cEEEEEE--C---Ceecc----CCCce-EEEEecCCEEEEEEcCCCC------CCeEEEEcCCC-ceEEE
Confidence 1223333 2 22221 22222 2333338888877653321 24588888766 55555
No 211
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=62.36 E-value=1.3e+02 Score=30.11 Aligned_cols=136 Identities=12% Similarity=0.040 Sum_probs=69.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CC-EEEEECccCC---------------CC-----CCcCcEEEE
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GT-MVVFQGGIGP---------------AG-----HSTDDLYVL 131 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~-~Iyv~GG~~~---------------~~-----~~~~dl~~~ 131 (769)
..+|.+|+.+++...+.... . ...... ++ .|++...... .+ .....+|++
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~---~----~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAK---N----IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIF 157 (347)
T ss_dssp EEEEEEETTTTEEEEEEEES---E----EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEE
T ss_pred ceEEEEECCCCceEEEEcCC---C----ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEE
Confidence 46999999988887775431 1 122222 33 4554432100 00 113679999
Q ss_pred EccCCcceE-EEeeecCCCCCCccccEEEEECCcEEEEEecCCCCC---c-cCceeEEeCCCCCceEEEcCCCCCCCCcc
Q 004198 132 DLTNDKFKW-HRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR---V-LSDAWALDTAQKPYVWQRLNPEGDRPSAR 206 (769)
Q Consensus 132 d~~t~~~~W-~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~---~-~~dv~~~d~~~~~~~W~~v~~~~~~P~~r 206 (769)
|+.+ .+. ..+.. + .........++ +++.+..+... . ..++|.+| +. ++..+...
T Consensus 158 d~~~--~~~~~~l~~----~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~--~~~~l~~~------- 216 (347)
T 2gop_A 158 DTES--EEVIEEFEK----P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DG--KEEKMFEK------- 216 (347)
T ss_dssp ETTT--TEEEEEEEE----E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TT--EEEEEEEE-------
T ss_pred ECCC--CeEEeeecC----C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CC--ceEEeccC-------
Confidence 9988 445 44532 2 22334444555 55545433221 2 46789999 45 56665421
Q ss_pred cccEEEEecCCEEEEEcccCCC--CCcccceEEEe
Q 004198 207 MYATASARSDGMFLLCGGRDAS--GAPLADAYGLL 239 (769)
Q Consensus 207 ~~hsa~~~~~g~l~v~GG~~~~--~~~l~d~~~ld 239 (769)
...... ..+|..+++.+.... ......+|.++
T Consensus 217 ~~~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 217 VSFYAV-DSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp ESEEEE-EECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred cceeeE-CCCCCEEEEEEccccCCccccceEEEEC
Confidence 112222 567755555443321 11245788887
No 212
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=61.51 E-value=1.4e+02 Score=36.54 Aligned_cols=93 Identities=14% Similarity=0.150 Sum_probs=45.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE----CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV----GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~----~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
+.+.++|+.+++....-.. ....-.++.. +..+++.|+. ...+.++|+.+.. ...... + .
T Consensus 679 ~~v~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~l~sg~~------d~~v~vwd~~~~~--~~~~~~-~--h 742 (1249)
T 3sfz_A 679 KKVKIWDSATGKLVHTYDE-----HSEQVNCCHFTNKSNHLLLATGSN------DFFLKLWDLNQKE--CRNTMF-G--H 742 (1249)
T ss_dssp SEEEEEETTTCCEEEEEEC-----CSSCEEEEEECSSSSCCEEEEEET------TSCEEEEETTSSS--EEEEEC-C--C
T ss_pred CeEEEEECCCCceEEEEcC-----CCCcEEEEEEecCCCceEEEEEeC------CCeEEEEECCCcc--hhheec-C--C
Confidence 4688899988764432211 0111122222 2244555543 2348999998843 222211 1 1
Q ss_pred CCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
. ..-.+++...++.+++.|+.++ .+.++|+.+.
T Consensus 743 ~-~~v~~~~~sp~~~~l~s~s~dg-----~v~vwd~~~~ 775 (1249)
T 3sfz_A 743 T-NSVNHCRFSPDDELLASCSADG-----TLRLWDVRSA 775 (1249)
T ss_dssp S-SCEEEEEECSSTTEEEEEESSS-----EEEEEEGGGT
T ss_pred C-CCEEEEEEecCCCEEEEEECCC-----eEEEEeCCCC
Confidence 1 1111233334445666676554 4677777655
No 213
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=61.27 E-value=1.6e+02 Score=30.84 Aligned_cols=172 Identities=15% Similarity=0.123 Sum_probs=78.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
+.+..+|+.+++-...-.. ....-.+....+..++.|+. ...+.+||+.+....+. +. + ...
T Consensus 179 g~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~l~s~s~------dg~i~~wd~~~~~~~~~-~~--~----~~~ 240 (445)
T 2ovr_B 179 RTLKVWNAETGECIHTLYG-----HTSTVRCMHLHEKRVVSGSR------DATLRVWDIETGQCLHV-LM--G----HVA 240 (445)
T ss_dssp SCEEEEETTTTEEEEEECC-----CSSCEEEEEEETTEEEEEET------TSEEEEEESSSCCEEEE-EE--C----CSS
T ss_pred CeEEEEECCcCcEEEEECC-----CCCcEEEEEecCCEEEEEeC------CCEEEEEECCCCcEEEE-Ec--C----Ccc
Confidence 4688888887753322111 01111222223333455543 24589999987432222 21 1 111
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccc
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLAD 234 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d 234 (769)
...++.+.+ .+++.|+.++ .+.+||+.+...... +... ... -.++.. ++..++.|+.++ .
T Consensus 241 ~v~~~~~~~-~~l~~~~~dg-----~i~iwd~~~~~~~~~-~~~~----~~~--v~~~~~-~~~~l~~~~~d~------~ 300 (445)
T 2ovr_B 241 AVRCVQYDG-RRVVSGAYDF-----MVKVWDPETETCLHT-LQGH----TNR--VYSLQF-DGIHVVSGSLDT------S 300 (445)
T ss_dssp CEEEEEECS-SCEEEEETTS-----CEEEEEGGGTEEEEE-ECCC----SSC--EEEEEE-CSSEEEEEETTS------C
T ss_pred cEEEEEECC-CEEEEEcCCC-----EEEEEECCCCcEeEE-ecCC----CCc--eEEEEE-CCCEEEEEeCCC------e
Confidence 112233344 5566666554 477888876621111 1111 111 122222 666667776543 3
Q ss_pred eEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 235 AYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 235 ~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
+..++..+. .-..... +. .....+...++..++.|+.. ..+.+||..+.+
T Consensus 301 i~i~d~~~~-~~~~~~~-~~----~~~v~~~~~~~~~l~~~~~d---------g~i~vwd~~~~~ 350 (445)
T 2ovr_B 301 IRVWDVETG-NCIHTLT-GH----QSLTSGMELKDNILVSGNAD---------STVKIWDIKTGQ 350 (445)
T ss_dssp EEEEETTTC-CEEEEEC-CC----CSCEEEEEEETTEEEEEETT---------SCEEEEETTTCC
T ss_pred EEEEECCCC-CEEEEEc-CC----cccEEEEEEeCCEEEEEeCC---------CeEEEEECCCCc
Confidence 556666533 1121111 11 01112223345566666632 358899987764
No 214
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=61.22 E-value=1.1e+02 Score=31.14 Aligned_cols=99 Identities=10% Similarity=0.027 Sum_probs=46.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE---CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeec-----
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV---GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ----- 146 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~---~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~----- 146 (769)
+.+..||+.+.+-...-.. ....-.+..+ +..+++.|+.+ ..+.+||+.+.......+...
T Consensus 166 ~~v~~~d~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~ll~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 166 PKVQLCDLKSGSCSHILQG-----HRQEILAVSWSPRYDYILATASAD------SRVKLWDVRRASGCLITLDQHNGKKS 234 (408)
T ss_dssp SSEEEEESSSSCCCEEECC-----CCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred CeEEEEeCCCcceeeeecC-----CCCcEEEEEECCCCCcEEEEEcCC------CcEEEEECCCCCcccccccccccccc
Confidence 5788899887643221111 0111112222 23466666642 348899987643222222110
Q ss_pred CCC----C-CCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 147 GQG----P-GPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 147 g~~----p-~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
... . ....-.+++...++.+++.|+.++ .+.+||+.+.
T Consensus 235 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~ 277 (408)
T 4a11_B 235 QAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN-----RMRLWNSSNG 277 (408)
T ss_dssp CCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC
T ss_pred eeeccccccccCceeEEEEcCCCCEEEEecCCC-----eEEEEECCCC
Confidence 000 0 111111333334445666676554 4788888775
No 215
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=60.44 E-value=1.7e+02 Score=30.64 Aligned_cols=93 Identities=16% Similarity=0.148 Sum_probs=47.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.|+.+|..+++..++-... .....-.++.. ++..++.|+. ...+.++|+.+.+ -.... .....
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~---~~~~~V~sv~fspdg~~lasgs~------Dg~v~iWd~~~~~--~~~~~---~~h~~ 190 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQME---QPGEYISSVAWIKEGNYLAVGTS------SAEVQLWDVQQQK--RLRNM---TSHSA 190 (420)
T ss_dssp TEEEEEETTTCCEEEEEECC---STTCCEEEEEECTTSSEEEEEET------TSCEEEEETTTTE--EEEEE---CCCSS
T ss_pred CEEEEEECCCCCEEEEEEec---CCCCcEEEEEECCCCCEEEEEEC------CCeEEEEEcCCCc--EEEEE---eCCCC
Confidence 57899999998876553221 11111122222 3455566653 2448999998842 22221 11122
Q ss_pred ccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 153 RYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
+ ..+....+ .+++.|+.++ .++.+|....
T Consensus 191 ~--v~~~s~~~-~~l~sgs~d~-----~i~~~d~~~~ 219 (420)
T 4gga_A 191 R--VGSLSWNS-YILSSGSRSG-----HIHHHDVRVA 219 (420)
T ss_dssp C--EEEEEEET-TEEEEEETTS-----EEEEEETTSS
T ss_pred c--eEEEeeCC-CEEEEEeCCC-----ceeEeeeccc
Confidence 2 12223343 5666676554 4666776554
No 216
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=58.14 E-value=1.5e+02 Score=29.39 Aligned_cols=18 Identities=6% Similarity=0.115 Sum_probs=13.4
Q ss_pred CcEEEEEC-CCCcEEEecC
Q 004198 75 NSVHLYDV-LTRKWTRIRP 92 (769)
Q Consensus 75 ~dv~~yD~-~~~~W~~l~~ 92 (769)
+.+..||+ .+.+...+..
T Consensus 79 g~i~~wd~~~~~~~~~~~~ 97 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQALTN 97 (342)
T ss_dssp SCEEEECSSSSSSEEECBS
T ss_pred CeEEEEEeccCCceEeccc
Confidence 57889999 8887766543
No 217
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=57.74 E-value=1.6e+02 Score=30.41 Aligned_cols=110 Identities=16% Similarity=0.057 Sum_probs=54.8
Q ss_pred EEEEEecCCCCCccCceeEEeCCCCCceEEEcCC-CCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCC
Q 004198 165 YLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNP-EGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN 243 (769)
Q Consensus 165 ~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~-~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~ 243 (769)
.+++.|+.++ .+.++|+.+. +....-. . .....-.+.....++.+++.|+.+ ..+..+|..+.
T Consensus 145 ~~l~s~~~dg-----~i~iwd~~~~--~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~ 208 (402)
T 2aq5_A 145 NVLLSAGCDN-----VILVWDVGTG--AAVLTLGPD---VHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRKG 208 (402)
T ss_dssp TEEEEEETTS-----CEEEEETTTT--EEEEEECTT---TCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTTT
T ss_pred CEEEEEcCCC-----EEEEEECCCC--CccEEEecC---CCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCCC
Confidence 4677777654 4888999877 4332210 1 011222334444677777777654 24666676543
Q ss_pred CceEEEeCCCCCCCcccceEEEE-eCCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 244 GQWEWTLAPGVAPSPRYQHAAVF-VGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 244 ~~W~W~~~~~~~P~~R~~hs~~~-~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
.-......+. ...+. ..+++ -++.+++.|.... ....+.+||+.+..
T Consensus 209 -~~~~~~~~~~-~~~~~-~~~~~~~~~~~l~~g~~~~------~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 209 -TVVAEKDRPH-EGTRP-VHAVFVSEGKILTTGFSRM------SERQVALWDTKHLE 256 (402)
T ss_dssp -EEEEEEECSS-CSSSC-CEEEECSTTEEEEEEECTT------CCEEEEEEETTBCS
T ss_pred -ceeeeeccCC-CCCcc-eEEEEcCCCcEEEEeccCC------CCceEEEEcCcccc
Confidence 1121110111 11112 22333 3677777773111 13468999987643
No 218
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=57.10 E-value=1.4e+02 Score=28.83 Aligned_cols=181 Identities=7% Similarity=-0.077 Sum_probs=93.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+++||+. +++....... ....-++++.- ++.+|+.... ...+++||+.. ++..+.. + ....
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g---~~~~~~~--~-~~~~ 99 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPT---PDAKVMCLTISSDGEVWFTENA------ANKIGRITKKG---IIKEYTL--P-NPDS 99 (299)
T ss_dssp TEEEEECTT-CCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECTTS---CEEEEEC--S-STTC
T ss_pred CcEEEEcCC-CCeEEecCCc---ccCceeeEEECCCCCEEEeCCC------CCeEEEECCCC---cEEEEeC--C-CcCC
Confidence 468999998 7777664321 11122333332 4578876432 23488998763 2444421 1 1122
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCccc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLA 233 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~ 233 (769)
.-+.++...++.+|+.... ...++++|+ +. +........ ....-+..+...++.+|+.... .+
T Consensus 100 ~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g--~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~ 162 (299)
T 2z2n_A 100 APYGITEGPNGDIWFTEMN-----GNRIGRITD-DG--KIREYELPN---KGSYPSFITLGSDNALWFTENQ------NN 162 (299)
T ss_dssp CEEEEEECTTSCEEEEETT-----TTEEEEECT-TC--CEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TT
T ss_pred CceeeEECCCCCEEEEecC-----CceEEEECC-CC--CEEEecCCC---CCCCCceEEEcCCCCEEEEeCC------CC
Confidence 2334544445577776532 245888998 44 333332211 1112234444567788875421 24
Q ss_pred ceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEec
Q 004198 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303 (769)
Q Consensus 234 d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~ 303 (769)
.++.++. ++.......+.. ...-.++++- ++.+|+.... .+.+.+||+ ++++..+
T Consensus 163 ~i~~~~~--~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~---------~~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 163 AIGRITE--SGDITEFKIPTP---ASGPVGITKGNDDALWFVEII---------GNKIGRITT-SGEITEF 218 (299)
T ss_dssp EEEEECT--TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT---------TTEEEEECT-TCCEEEE
T ss_pred EEEEEcC--CCcEEEeeCCCC---CCcceeEEECCCCCEEEEccC---------CceEEEECC-CCcEEEE
Confidence 5778887 344443323211 1112233343 5678876431 245899999 7776654
No 219
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=55.46 E-value=2.3e+02 Score=30.83 Aligned_cols=59 Identities=10% Similarity=0.023 Sum_probs=35.1
Q ss_pred CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCC
Q 004198 109 GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQ 188 (769)
Q Consensus 109 ~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~ 188 (769)
++.+|+|-| +..|+||..+. +...-.- ..+|. . -++.... +.+|+|-| +..|+||..+
T Consensus 158 ~~~~yfFkG--------~~yw~yd~~~~--~~~~~~w-~gi~~--i-DAA~~~~-g~~YfFkG-------~~y~rfd~~~ 215 (460)
T 1qhu_A 158 DEGILFFQG--------NRKWFWDLTTG--TKKERSW-PAVGN--C-TSALRWL-GRYYCFQG-------NQFLRFNPVS 215 (460)
T ss_dssp SSEEEEEET--------TEEEEEETTTT--EEEEECC-TTSCC--C-SEEEEET-TEEEEEET-------TEEEEECTTT
T ss_pred CCeEEEEec--------ccEEEEecccc--eeecccC-CCCCc--c-chheeeC-CceEEEEC-------CEEEEEcCcc
Confidence 568888877 34899999873 3332211 11222 2 2333444 58899988 4577787654
Q ss_pred C
Q 004198 189 K 189 (769)
Q Consensus 189 ~ 189 (769)
.
T Consensus 216 ~ 216 (460)
T 1qhu_A 216 G 216 (460)
T ss_dssp C
T ss_pred C
Confidence 3
No 220
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=55.44 E-value=1.5e+02 Score=28.71 Aligned_cols=167 Identities=5% Similarity=0.033 Sum_probs=79.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+++||.....-..+... ....-++++.. ++.+|+.... ...+++||... .....+...+.. .
T Consensus 100 ~~i~~~d~~g~~~~~~~~~----~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g--~~~~~~~~~~~~---~ 164 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGAT----ILQHPRGVTVDNKGRIIVVECK------VMRVIIFDQNG--NVLHKFGCSKHL---E 164 (286)
T ss_dssp CEEEEECTTSCEEEEECTT----TCSCEEEEEECTTSCEEEEETT------TTEEEEECTTS--CEEEEEECTTTC---S
T ss_pred CEEEEECCCCcEEEEecCc----cCCCceEEEEeCCCCEEEEECC------CCEEEEEcCCC--CEEEEeCCCCcc---C
Confidence 4677888544433333221 11112333332 4578886532 24689999755 233333211111 1
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCccc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLA 233 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~ 233 (769)
.-..+++..++.+|+.... .+.+.+||.... ....+...+.. ..-...+...+|.+|+....+. .
T Consensus 165 ~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~--~~~~~~~~g~~---~~p~~i~~d~~G~l~v~~~~~~-----~ 229 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQ--YLRQIGGEGIT---NYPIGVGINSNGEILIADNHNN-----F 229 (286)
T ss_dssp SEEEEEECSSSEEEEEEGG-----GTEEEEEETTCC--EEEEESCTTTS---CSEEEEEECTTCCEEEEECSSS-----C
T ss_pred CcEEEEECCCCCEEEEECC-----CCEEEEEcCCCC--EEEEEccCCcc---CCCcEEEECCCCCEEEEeCCCC-----E
Confidence 2234445555678886542 346899998654 33344322111 1112344446788888754321 1
Q ss_pred ceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEe
Q 004198 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTG 275 (769)
Q Consensus 234 d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~G 275 (769)
.+..|+......+.+... . +.. .-+++++- ++++||..
T Consensus 230 ~i~~~~~~g~~~~~~~~~--~-~~~-~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 230 NLTIFTQDGQLISALESK--V-KHA-QCFDVALMDDGSVVLAS 268 (286)
T ss_dssp EEEEECTTSCEEEEEEES--S-CCS-CEEEEEEETTTEEEEEE
T ss_pred EEEEECCCCCEEEEEccc--C-CCC-cceeEEECCCCcEEEEC
Confidence 467777543211222211 1 111 12344443 67888874
No 221
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=55.00 E-value=2.2e+02 Score=30.36 Aligned_cols=114 Identities=20% Similarity=0.272 Sum_probs=68.0
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccC-----
Q 004198 45 GPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIG----- 119 (769)
Q Consensus 45 ~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~----- 119 (769)
++.|||.---+.... +-+.+++.+..-..|+.+..... .-....-.+.+++.||+||...
T Consensus 348 dgvLyLtTRgt~~~~-------------~GS~L~rs~d~Gq~w~slrfp~n--vHhtnlPFakvgD~l~mFgsERA~nEW 412 (670)
T 3ju4_A 348 DGVLYLITRGTRGDR-------------LGSSLHRSRDIGQTWESLRFPHN--VHHTTLPFAKVGDDLIMFGSERAENEW 412 (670)
T ss_dssp TTEEEEEEEESCTTS-------------CCCEEEEESSTTSSCEEEECTTC--CCSSCCCEEEETTEEEEEEECSSTTCS
T ss_pred CCEEEEEecCcCCCC-------------CcceeeeecccCCchhheecccc--ccccCCCcceeCCEEEEEecccccccc
Confidence 778888754333221 34678888888889998875321 1223334678899999999642
Q ss_pred CCCCC-------cCcEE--EEEccC---CcceEEEeee---cCCCCCCccccEEEEECCc-EEEEEecCC
Q 004198 120 PAGHS-------TDDLY--VLDLTN---DKFKWHRVVV---QGQGPGPRYGHVMDLVSQR-YLVSVSGND 173 (769)
Q Consensus 120 ~~~~~-------~~dl~--~~d~~t---~~~~W~~~~~---~g~~p~~R~~hs~~~~~~~-~l~v~GG~~ 173 (769)
+.+.. ....+ +.+..+ ++-+|..+.- .|.....-.|...++++++ ..|+|||.+
T Consensus 413 E~G~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd 482 (670)
T 3ju4_A 413 EAGAPDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGED 482 (670)
T ss_dssp STTCCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBC
T ss_pred ccCCCcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcc
Confidence 11111 12223 334433 2346887753 3555556666666677666 566789954
No 222
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=54.91 E-value=2.6e+02 Score=31.17 Aligned_cols=203 Identities=13% Similarity=0.072 Sum_probs=96.0
Q ss_pred cCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCc-EEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCC
Q 004198 125 TDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQR-YLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRP 203 (769)
Q Consensus 125 ~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~-~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P 203 (769)
...+++.|..+. +...+. ..+..+.-|...+..++ ++|+... ..+.+.++|+++...... +...+..|
T Consensus 319 ~g~v~~vd~~~~--~~~~v~---~i~~~~~~~d~~~~pdgr~~~va~~-----~sn~V~ViD~~t~kl~~~-i~vgg~~P 387 (567)
T 1qks_A 319 TGKILLVDYTDL--NNLKTT---EISAERFLHDGGLDGSHRYFITAAN-----ARNKLVVIDTKEGKLVAI-EDTGGQTP 387 (567)
T ss_dssp TTEEEEEETTCS--SEEEEE---EEECCSSEEEEEECTTSCEEEEEEG-----GGTEEEEEETTTTEEEEE-EECSSSSB
T ss_pred CCeEEEEecCCC--ccceee---eeeccccccCceECCCCCEEEEEeC-----CCCeEEEEECCCCcEEEE-EeccCcCC
Confidence 356899998773 333332 23445666666555444 4444332 246799999998733332 22214445
Q ss_pred CcccccEEEEecC-CEEEEEcccCCCCCcccceEEEecCCC----CceEEEeCCCCCCCcccceEEEEe--CCEEEEEec
Q 004198 204 SARMYATASARSD-GMFLLCGGRDASGAPLADAYGLLMHRN----GQWEWTLAPGVAPSPRYQHAAVFV--GARLHVTGG 276 (769)
Q Consensus 204 ~~r~~hsa~~~~~-g~l~v~GG~~~~~~~l~d~~~ld~~~~----~~W~W~~~~~~~P~~R~~hs~~~~--~~~i~V~GG 276 (769)
.+.+... ....+ +.+|+.+-.. -+.+-.++.... ..|+.+..-...+.+- ...... +..+||--.
T Consensus 388 hpg~g~~-~~~p~~g~v~~t~~~g-----~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~--~~i~~~p~~~~l~v~~~ 459 (567)
T 1qks_A 388 HPGRGAN-FVHPTFGPVWATSHMG-----DDSVALIGTDPEGHPDNAWKILDSFPALGGGS--LFIKTHPNSQYLYVDAT 459 (567)
T ss_dssp CCTTCEE-EEETTTEEEEEEEBSS-----SSEEEEEECCTTTCTTTBTSEEEEEECSCSCC--CCEECCTTCSEEEEECT
T ss_pred CCcccee-eECCCCCcEEEeCCCC-----CCeEEEecCCCCCCccccCEEEEEEecCCCCC--EEEEeCCCCCeEEEecC
Confidence 5533222 23343 5666654221 123445554431 1254332211111110 111111 456777431
Q ss_pred ccCCCCcccCCCcEEEEECCCC-------cEEeccC-----CccCCCCCCCCCCCCCccCcccccceEEEEe-CCEEEEE
Q 004198 277 ALRGGRAIEGEAAVAVLDTAAG-------VWLDRNG-----LVTSSRTSKGHGEHDPSLELMRRCRHASASI-GVRIYIY 343 (769)
Q Consensus 277 ~~~~~~~~~~~~~v~~yd~~t~-------~W~~~~~-----~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~-~~~iyv~ 343 (769)
.+. . ....+.|.+||+.+. .+..+.. ++. ...|..|-...- +..+|+-
T Consensus 460 ~~~-~--~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~G~~~~~s 520 (567)
T 1qks_A 460 LNP-E--AEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITE----------------GQPRVVQGEFNKDGTEVWFS 520 (567)
T ss_dssp TCS-S--HHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCS----------------SCCEEEEEEECTTSSEEEEE
T ss_pred CCC-C--cccCceEEEEECCcccccccCCCcEEeccccccccCC----------------CCcceEeeeECCCCCEEEEE
Confidence 110 0 001357999998765 2233321 111 115655554443 4478876
Q ss_pred cCcCCCccccceEEecCCCCccc
Q 004198 344 GGLKGDILLDDFLVAENSPFQSD 366 (769)
Q Consensus 344 GG~~~~~~~~D~~~ld~~~~~~~ 366 (769)
-+ ++...-+.+.++|..+++..
T Consensus 521 ~~-~~~~~~~~i~v~D~~t~~~~ 542 (567)
T 1qks_A 521 VW-NGKDQESALVVVDDKTLELK 542 (567)
T ss_dssp EE-CCTTSCCEEEEEETTTTEEE
T ss_pred ee-cCCCCCCcEEEEECCCceEE
Confidence 22 22223577888998887644
No 223
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=54.82 E-value=1.7e+02 Score=28.92 Aligned_cols=103 Identities=14% Similarity=0.112 Sum_probs=50.0
Q ss_pred EEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCC
Q 004198 165 YLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNG 244 (769)
Q Consensus 165 ~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~ 244 (769)
.+++.|+.++ .+.++|..+. +....... ....-.+.....++.+++.|+.++ .+..++.....
T Consensus 186 ~~~~s~~~d~-----~i~i~d~~~~--~~~~~~~~----h~~~v~~~~~s~~~~~l~s~s~Dg------~i~iwd~~~~~ 248 (340)
T 4aow_A 186 PIIVSCGWDK-----LVKVWNLANC--KLKTNHIG----HTGYLNTVTVSPDGSLCASGGKDG------QAMLWDLNEGK 248 (340)
T ss_dssp CEEEEEETTS-----CEEEEETTTT--EEEEEECC----CSSCEEEEEECTTSSEEEEEETTC------EEEEEETTTTE
T ss_pred cEEEEEcCCC-----EEEEEECCCC--ceeeEecC----CCCcEEEEEECCCCCEEEEEeCCC------eEEEEEeccCc
Confidence 5566666544 3778888876 32222111 111123344456777888887643 34455555331
Q ss_pred ceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 245 QWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 245 ~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
....... . ..-.++++..+..++.++. ...+.+||..+..
T Consensus 249 ~~~~~~~--~----~~v~~~~~~~~~~~~~~~~---------d~~i~iwd~~~~~ 288 (340)
T 4aow_A 249 HLYTLDG--G----DIINALCFSPNRYWLCAAT---------GPSIKIWDLEGKI 288 (340)
T ss_dssp EEEEEEC--S----SCEEEEEECSSSSEEEEEE---------TTEEEEEETTTTE
T ss_pred eeeeecC--C----ceEEeeecCCCCceeeccC---------CCEEEEEECCCCe
Confidence 1111111 1 1112333334444555553 2347888887764
No 224
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=54.80 E-value=1.7e+02 Score=28.96 Aligned_cols=94 Identities=10% Similarity=0.068 Sum_probs=43.7
Q ss_pred CcEEEEECCCCcEEE-ecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTR-IRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~-l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+.++|+.+++-.. +... ...-.+++.. ++.+++.|+. ...+.++|+.+.. .-.... .+ ..
T Consensus 77 ~~i~vwd~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~sgs~------D~~v~lWd~~~~~-~~~~~~-~~---h~ 140 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFEAH-----PDYIRSIAVHPTKPYVLSGSD------DLTVKLWNWENNW-ALEQTF-EG---HE 140 (304)
T ss_dssp SEEEEEETTTCCEEEEEECC-----SSCEEEEEECSSSSEEEEEET------TSCEEEEEGGGTT-EEEEEE-CC---CC
T ss_pred CEEEEEECCCCcEEEEEeCC-----CCcEEEEEEcCCCCEEEEECC------CCeEEEEECCCCc-chhhhh-cc---cC
Confidence 468888988775332 2111 0011122222 3445555553 2348889987632 111111 01 01
Q ss_pred ccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 153 RYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 153 R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
..-.+++.. .+..+++.|+.++ .+.+||+.+.
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~-----~v~iwd~~~~ 173 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQS 173 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTS-----EEEEEETTCS
T ss_pred CcEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 111122222 2346677777664 4777787654
No 225
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=54.65 E-value=1.7e+02 Score=28.84 Aligned_cols=100 Identities=11% Similarity=0.070 Sum_probs=49.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCC-cccccceEEEE--CCEEEEECcc---CCCCC--CcCcEEEEEccCCcceEEEeeec
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPP-SPRAAHAAAAV--GTMVVFQGGI---GPAGH--STDDLYVLDLTNDKFKWHRVVVQ 146 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P-~~R~~hs~~~~--~~~Iyv~GG~---~~~~~--~~~dl~~~d~~t~~~~W~~~~~~ 146 (769)
+.++++|+.+.+-...-..+... ....-+.++.. ++.+|+.... ..... ....+++||+.+. +.......
T Consensus 56 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~--~~~~~~~~ 133 (337)
T 1pby_B 56 ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL--SRRKAFEA 133 (337)
T ss_dssp TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT--EEEEEEEC
T ss_pred CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC--cEEEEEeC
Confidence 57999999988754322221100 00011233332 3477776421 11111 2367999999883 34333221
Q ss_pred CCCCCCccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 147 GQGPGPRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 147 g~~p~~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
+.. -+.++.. +++.+|+.+ +.++++|+.+.
T Consensus 134 ~~~-----~~~~~~s~dg~~l~~~~--------~~i~~~d~~~~ 164 (337)
T 1pby_B 134 PRQ-----ITMLAWARDGSKLYGLG--------RDLHVMDPEAG 164 (337)
T ss_dssp CSS-----CCCEEECTTSSCEEEES--------SSEEEEETTTT
T ss_pred CCC-----cceeEECCCCCEEEEeC--------CeEEEEECCCC
Confidence 211 2233333 333465551 46999999877
No 226
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=54.53 E-value=2.6e+02 Score=31.13 Aligned_cols=197 Identities=11% Similarity=0.098 Sum_probs=97.2
Q ss_pred CcEEEEECC--CCcE-EEecCCCCCCcccccceEEE-----ECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeec
Q 004198 75 NSVHLYDVL--TRKW-TRIRPAGEPPSPRAAHAAAA-----VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ 146 (769)
Q Consensus 75 ~dv~~yD~~--~~~W-~~l~~~g~~P~~R~~hs~~~-----~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~ 146 (769)
+.+..||+. +.+= .++.. |. .|| +.+.. -+..+|+..-. .+.+.++|..+.+.. ..+++.
T Consensus 218 g~V~viD~~~~t~~~v~~i~~-G~--~P~--~ia~s~~~~pDGk~l~v~n~~------~~~v~ViD~~t~~~~-~~i~~~ 285 (567)
T 1qks_A 218 GKVNMIDLWMKEPTTVAEIKI-GS--EAR--SIETSKMEGWEDKYAIAGAYW------PPQYVIMDGETLEPK-KIQSTR 285 (567)
T ss_dssp SEEEEEETTSSSCCEEEEEEC-CS--EEE--EEEECCSTTCTTTEEEEEEEE------TTEEEEEETTTCCEE-EEEECC
T ss_pred CeEEEEECCCCCCcEeEEEec-CC--CCc--eeEEccccCCCCCEEEEEEcc------CCeEEEEECCCCcEE-EEEecc
Confidence 469999995 4432 22322 21 222 22233 23477776532 355889998873211 223321
Q ss_pred CC-------CCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEE
Q 004198 147 GQ-------GPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMF 219 (769)
Q Consensus 147 g~-------~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l 219 (769)
+. .|.+|.........+..+++-= ...+.++..|.... +..++... +..+.-|......+++.
T Consensus 286 ~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~-----~~~g~v~~vd~~~~--~~~~v~~i---~~~~~~~d~~~~pdgr~ 355 (567)
T 1qks_A 286 GMTYDEQEYHPEPRVAAILASHYRPEFIVNV-----KETGKILLVDYTDL--NNLKTTEI---SAERFLHDGGLDGSHRY 355 (567)
T ss_dssp EECTTTCCEESCCCEEEEEECSSSSEEEEEE-----TTTTEEEEEETTCS--SEEEEEEE---ECCSSEEEEEECTTSCE
T ss_pred ccccccccccCCCceEEEEEcCCCCEEEEEe-----cCCCeEEEEecCCC--ccceeeee---eccccccCceECCCCCE
Confidence 11 1233444333222333444321 12356888888765 34333322 33455566666667655
Q ss_pred EEEcccCCCCCcccceEEEecCCCCceEEEeCC-CCCCCcccceEEEEe--CCEEEEEecccCCCCcccCCCcEEEEECC
Q 004198 220 LLCGGRDASGAPLADAYGLLMHRNGQWEWTLAP-GVAPSPRYQHAAVFV--GARLHVTGGALRGGRAIEGEAAVAVLDTA 296 (769)
Q Consensus 220 ~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~-~~~P~~R~~hs~~~~--~~~i~V~GG~~~~~~~~~~~~~v~~yd~~ 296 (769)
++..-. ..+.+..+|..+. +-...... +..|.+..+... +. ++.+|+.+-.. .+.|.++|+.
T Consensus 356 ~~va~~-----~sn~V~ViD~~t~-kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g--------~~~Vsvid~~ 420 (567)
T 1qks_A 356 FITAAN-----ARNKLVVIDTKEG-KLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMG--------DDSVALIGTD 420 (567)
T ss_dssp EEEEEG-----GGTEEEEEETTTT-EEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSS--------SSEEEEEECC
T ss_pred EEEEeC-----CCCeEEEEECCCC-cEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCC--------CCeEEEecCC
Confidence 443321 1356778888754 33333333 333444332222 22 36677764211 2458899887
Q ss_pred CCc-----EEeccCCcc
Q 004198 297 AGV-----WLDRNGLVT 308 (769)
Q Consensus 297 t~~-----W~~~~~~~~ 308 (769)
+.. |+.+..+..
T Consensus 421 ~~~~~~~~~kvv~~i~~ 437 (567)
T 1qks_A 421 PEGHPDNAWKILDSFPA 437 (567)
T ss_dssp TTTCTTTBTSEEEEEEC
T ss_pred CCCCccccCEEEEEEec
Confidence 733 887766643
No 227
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=53.20 E-value=1.9e+02 Score=29.09 Aligned_cols=108 Identities=13% Similarity=-0.001 Sum_probs=54.4
Q ss_pred CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCC
Q 004198 163 QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHR 242 (769)
Q Consensus 163 ~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~ 242 (769)
++.+++.|+.++ .+.+||+.+. +-..+... .......+.....++.+++.|+.++ .+..+|..+
T Consensus 138 ~~~~l~s~s~dg-----~i~~wd~~~~--~~~~~~~~---~~~~~i~~~~~~pdg~~lasg~~dg------~i~iwd~~~ 201 (343)
T 3lrv_A 138 NTEYFIWADNRG-----TIGFQSYEDD--SQYIVHSA---KSDVEYSSGVLHKDSLLLALYSPDG------ILDVYNLSS 201 (343)
T ss_dssp -CCEEEEEETTC-----CEEEEESSSS--CEEEEECC---CSSCCCCEEEECTTSCEEEEECTTS------CEEEEESSC
T ss_pred CCCEEEEEeCCC-----cEEEEECCCC--cEEEEEec---CCCCceEEEEECCCCCEEEEEcCCC------EEEEEECCC
Confidence 346677777654 4788888876 33222211 1111234555567888888887543 355566654
Q ss_pred CCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 243 NGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 243 ~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
...- -...... ....-.++++. ++..++.|+ . +.+.+||+.+.+
T Consensus 202 ~~~~-~~~~~~~--h~~~v~~l~fs~~g~~l~s~~-~---------~~v~iwd~~~~~ 246 (343)
T 3lrv_A 202 PDQA-SSRFPVD--EEAKIKEVKFADNGYWMVVEC-D---------QTVVCFDLRKDV 246 (343)
T ss_dssp TTSC-CEECCCC--TTSCEEEEEECTTSSEEEEEE-S---------SBEEEEETTSST
T ss_pred CCCC-ccEEecc--CCCCEEEEEEeCCCCEEEEEe-C---------CeEEEEEcCCCC
Confidence 3111 0111110 01111223332 566666666 1 148999987653
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=51.89 E-value=1.9e+02 Score=28.68 Aligned_cols=193 Identities=10% Similarity=0.008 Sum_probs=87.2
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+++||+ +.+.+.+.... . ..++.+.- ++.+|+.... ...+++||.. . +.+.+..........
T Consensus 67 ~~i~~~~~-~g~~~~~~~~~----~-~~~gl~~d~dG~l~v~~~~------~~~v~~~~~~-g--~~~~~~~~~~~~~~~ 131 (305)
T 3dr2_A 67 RRVLGWRE-DGTVDVLLDAT----A-FTNGNAVDAQQRLVHCEHG------RRAITRSDAD-G--QAHLLVGRYAGKRLN 131 (305)
T ss_dssp TEEEEEET-TSCEEEEEESC----S-CEEEEEECTTSCEEEEETT------TTEEEEECTT-S--CEEEEECEETTEECS
T ss_pred CEEEEEeC-CCCEEEEeCCC----C-ccceeeECCCCCEEEEECC------CCEEEEECCC-C--CEEEEEeccCCCccC
Confidence 56888988 45555443221 1 11223222 4567775321 1358888875 2 244432110100001
Q ss_pred cccEEEEECCcEEEEE----ecCCC--------CCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEE
Q 004198 154 YGHVMDLVSQRYLVSV----SGNDG--------KRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFL 220 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~----GG~~~--------~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~ 220 (769)
.-..+++..++.+|+. |.... ......+++||+.+. ++..+. ... .-...+...++ .+|
T Consensus 132 ~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g--~~~~~~-~~~-----~p~gl~~spdg~~ly 203 (305)
T 3dr2_A 132 SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS--PLQRMA-DLD-----HPNGLAFSPDEQTLY 203 (305)
T ss_dssp CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC--CCEEEE-EES-----SEEEEEECTTSSEEE
T ss_pred CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC--cEEEEe-cCC-----CCcceEEcCCCCEEE
Confidence 1123445556677774 43211 012357999999776 444443 111 11233444566 477
Q ss_pred EEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEE-eCCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 221 LCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVF-VGARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 221 v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~-~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
+....... ...+.++.|+....+ ..-...-...+. ..-..+++ -++.||+..+ ..|++||++...
T Consensus 204 v~~~~~~~-~~~~~i~~~~~~~~~-l~~~~~~~~~~~-~~pdgi~~d~~G~lwv~~~-----------~gv~~~~~~g~~ 269 (305)
T 3dr2_A 204 VSQTPEQG-HGSVEITAFAWRDGA-LHDRRHFASVPD-GLPDGFCVDRGGWLWSSSG-----------TGVCVFDSDGQL 269 (305)
T ss_dssp EEECCC----CCCEEEEEEEETTE-EEEEEEEECCSS-SCCCSEEECTTSCEEECCS-----------SEEEEECTTSCE
T ss_pred EEecCCcC-CCCCEEEEEEecCCC-ccCCeEEEECCC-CCCCeEEECCCCCEEEecC-----------CcEEEECCCCCE
Confidence 65432110 012568888876432 111110000001 11122333 2566776531 248999997665
Q ss_pred EEecc
Q 004198 300 WLDRN 304 (769)
Q Consensus 300 W~~~~ 304 (769)
-..+.
T Consensus 270 ~~~~~ 274 (305)
T 3dr2_A 270 LGHIP 274 (305)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55543
No 229
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=51.54 E-value=3.8e+02 Score=32.08 Aligned_cols=183 Identities=8% Similarity=0.014 Sum_probs=86.7
Q ss_pred CCcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC-
Q 004198 74 TNSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP- 152 (769)
Q Consensus 74 ~~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~- 152 (769)
...+|.+|+....-..+...... ...+..-++..++++. ...+|++|+.. .+...+.........
T Consensus 225 ~~~l~~~~~~g~~~~~l~~~~~~-----~~~~~SpDG~~la~~~-------~~~i~~~d~~~--~~l~~l~~~~~~~~~~ 290 (1045)
T 1k32_A 225 FGQIYSTDLDGKDLRKHTSFTDY-----YPRHLNTDGRRILFSK-------GGSIYIFNPDT--EKIEKIEIGDLESPED 290 (1045)
T ss_dssp SCEEEEEETTSCSCEECCCCCSS-----CEEEEEESSSCEEEEE-------TTEEEEECTTT--CCEEECCCCCCCBCCS
T ss_pred ceEEEEEeCCCCcceEecCCCCc-----ceeeEcCCCCEEEEEe-------CCEEEEecCCc--eEeeeeccCccccccc
Confidence 35788888877766666543211 1112223443333331 24689998854 233333210000000
Q ss_pred -----ccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 153 -----RYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 153 -----R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
..-..+... .++..++++. ...++.++..+. ....+... +..+. ...... ++..+++++.
T Consensus 291 ~~~~~~~v~~~~~S~pdG~~la~~~------~~~i~~~~~~~~--~~~~~~~~---~~~~~-~~~~~s-dg~~l~~~s~- 356 (1045)
T 1k32_A 291 RIISIPSKFAEDFSPLDGDLIAFVS------RGQAFIQDVSGT--YVLKVPEP---LRIRY-VRRGGD-TKVAFIHGTR- 356 (1045)
T ss_dssp EEEECGGGGEEEEEECGGGCEEEEE------TTEEEEECTTSS--BEEECSCC---SCEEE-EEECSS-SEEEEEEEET-
T ss_pred ccccccccceeeecCCCCCEEEEEE------cCEEEEEcCCCC--ceEEccCC---CcceE-EeeeEc-CCCeEEEEEC-
Confidence 122344444 3444444443 246888888776 44444322 11122 122223 6655555442
Q ss_pred CCCCcccceE-EEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEecc
Q 004198 227 ASGAPLADAY-GLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDRN 304 (769)
Q Consensus 227 ~~~~~l~d~~-~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~ 304 (769)
-..+| .++.... ....+.+ ..... +..++. +++.++++.. ...++++|+++++-..+.
T Consensus 357 -----~~~l~~~~d~~~~---~~~~l~~--~~~~~-~~~~~SpDG~~la~~~~---------~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 357 -----EGDFLGIYDYRTG---KAEKFEE--NLGNV-FAMGVDRNGKFAVVAND---------RFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp -----TEEEEEEEETTTC---CEEECCC--CCCSE-EEEEECTTSSEEEEEET---------TSEEEEEETTTCCEEEEE
T ss_pred -----CCceEEEEECCCC---CceEecC--Cccce-eeeEECCCCCEEEEECC---------CCeEEEEECCCCceEEec
Confidence 24677 6776543 2223321 11111 233332 5666666542 236999999988766654
No 230
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=51.15 E-value=1.6e+02 Score=28.96 Aligned_cols=13 Identities=8% Similarity=0.097 Sum_probs=9.1
Q ss_pred CCEEEEEcCcCCC
Q 004198 337 GVRIYIYGGLKGD 349 (769)
Q Consensus 337 ~~~iyv~GG~~~~ 349 (769)
++.+++.||.++.
T Consensus 265 ~g~~las~~~D~~ 277 (297)
T 2pm7_B 265 SGNVLALSGGDNK 277 (297)
T ss_dssp SSCCEEEEETTSC
T ss_pred CCCEEEEEcCCCc
Confidence 5677778887764
No 231
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=50.73 E-value=2.5e+02 Score=29.62 Aligned_cols=62 Identities=15% Similarity=0.078 Sum_probs=31.4
Q ss_pred cEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCC
Q 004198 164 RYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHR 242 (769)
Q Consensus 164 ~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~ 242 (769)
+.+++.|+.++ .+.+||+.+.......+... .... .+.... ++.+++.|+.++ .+..++..+
T Consensus 210 ~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~~~h----~~~v-~~~~~s-d~~~l~s~~~d~------~v~vwd~~~ 271 (450)
T 2vdu_B 210 HQFIITSDRDE-----HIKISHYPQCFIVDKWLFGH----KHFV-SSICCG-KDYLLLSAGGDD------KIFAWDWKT 271 (450)
T ss_dssp CEEEEEEETTS-----CEEEEEESCTTCEEEECCCC----SSCE-EEEEEC-STTEEEEEESSS------EEEEEETTT
T ss_pred CcEEEEEcCCC-----cEEEEECCCCceeeeeecCC----CCce-EEEEEC-CCCEEEEEeCCC------eEEEEECCC
Confidence 57778887653 57788887652121112111 1111 222333 777777776432 355555543
No 232
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=50.27 E-value=3.2e+02 Score=30.80 Aligned_cols=105 Identities=13% Similarity=0.124 Sum_probs=51.7
Q ss_pred EEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCC
Q 004198 165 YLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNG 244 (769)
Q Consensus 165 ~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~ 244 (769)
.+++.|+.++ .+.++|+.+.... ..+.. ....-.+.....++.+++.|+.++ .+..+|..+.
T Consensus 532 ~~l~s~s~d~-----~v~vwd~~~~~~~-~~~~~-----h~~~v~~v~~spdg~~l~sg~~Dg------~i~iwd~~~~- 593 (694)
T 3dm0_A 532 PTIVSASWDK-----TVKVWNLSNCKLR-STLAG-----HTGYVSTVAVSPDGSLCASGGKDG------VVLLWDLAEG- 593 (694)
T ss_dssp CEEEEEETTS-----CEEEEETTTCCEE-EEECC-----CSSCEEEEEECTTSSEEEEEETTS------BCEEEETTTT-
T ss_pred ceEEEEeCCC-----eEEEEECCCCcEE-EEEcC-----CCCCEEEEEEeCCCCEEEEEeCCC------eEEEEECCCC-
Confidence 4566676554 4778888765211 12211 111123344457788888887653 2445555433
Q ss_pred ceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 245 QWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 245 ~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
+...... ....-+++++..+..++.++. ...+.+||+.+.+-.
T Consensus 594 --~~~~~~~---~~~~v~~~~~sp~~~~l~~~~---------~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 594 --KKLYSLE---ANSVIHALCFSPNRYWLCAAT---------EHGIKIWDLESKSIV 636 (694)
T ss_dssp --EEEECCB---CSSCEEEEEECSSSSEEEEEE---------TTEEEEEETTTTEEE
T ss_pred --ceEEEec---CCCcEEEEEEcCCCcEEEEEc---------CCCEEEEECCCCCCh
Confidence 2221111 111223444443333444442 234889999877543
No 233
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=50.05 E-value=1.5e+02 Score=28.07 Aligned_cols=110 Identities=11% Similarity=0.092 Sum_probs=56.6
Q ss_pred CCEEEEECccCCCCCCcCcEEEEEccCCcceE-EEeeecC-CCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeC
Q 004198 109 GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKW-HRVVVQG-QGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDT 186 (769)
Q Consensus 109 ~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W-~~~~~~g-~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~ 186 (769)
++++|+|-| +..|+|+-.+....+ ..+...+ .+|......+.....++++|+|-| +..|+||.
T Consensus 61 ~g~~yfFkg--------~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~ 125 (196)
T 3c7x_A 61 DGKFVFFKG--------DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNE 125 (196)
T ss_dssp TSCEEEEET--------TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEET
T ss_pred CCcEEEecC--------CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeC
Confidence 567888866 347999854310001 1121111 134332333332224568999877 46899998
Q ss_pred CCCCceE---EEcCCCCCCCCcccccEEEEecCC-EEEEEcccCCCCCcccceEEEecCCC
Q 004198 187 AQKPYVW---QRLNPEGDRPSARMYATASARSDG-MFLLCGGRDASGAPLADAYGLLMHRN 243 (769)
Q Consensus 187 ~~~~~~W---~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG~~~~~~~l~d~~~ld~~~~ 243 (769)
.++...- ..+..-.. .+..-.++....++ .+|+|-| +..|+|+..+.
T Consensus 126 ~~~~v~~gyPk~i~~~~g--ip~~idaAf~~~~~~~~YfFkg--------~~y~r~d~~~~ 176 (196)
T 3c7x_A 126 ELRAVDSEYPKNIKVWEG--IPESPRGSFMGSDEVFTYFYKG--------NKYWKFNNQKL 176 (196)
T ss_dssp TTTEECTTCSEEGGGSBT--CCSSCSEEEECTTSSEEEEEET--------TEEEEEETTTT
T ss_pred CcccccCCCCccHHHCCC--cCCCcceeEEecCCCEEEEEEC--------CEEEEEECCcc
Confidence 7651100 11111101 12233556655565 8999866 45788887644
No 234
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=50.00 E-value=2.2e+02 Score=32.09 Aligned_cols=110 Identities=12% Similarity=0.046 Sum_probs=49.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECC-EEEEECccCCC--CCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGT-MVVFQGGIGPA--GHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~-~Iyv~GG~~~~--~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
+.++.+|+.+++-..+........-.....+..-++ .|.+....... .....+++++|+.+.. -..+.. .....
T Consensus 37 g~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~l~~-~~~~~ 113 (723)
T 1xfd_A 37 GTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD--PQSLDP-PEVSN 113 (723)
T ss_dssp SCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC--CEECCC-TTCCS
T ss_pred CCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc--eEeccC-Ccccc
Confidence 468888988877655543211100011111122234 44443322111 1234789999998843 344421 11111
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEc
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRL 196 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v 196 (769)
.+.. ......++..++++.. ++++++|..+. +...+
T Consensus 114 ~~~~-~~~~SPdG~~la~~~~------~~i~~~~~~~g--~~~~~ 149 (723)
T 1xfd_A 114 AKLQ-YAGWGPKGQQLIFIFE------NNIYYCAHVGK--QAIRV 149 (723)
T ss_dssp CCCS-BCCBCSSTTCEEEEET------TEEEEESSSSS--CCEEE
T ss_pred cccc-ccEECCCCCEEEEEEC------CeEEEEECCCC--ceEEE
Confidence 1111 1212223334444442 47999998876 44444
No 235
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=49.14 E-value=20 Score=35.99 Aligned_cols=65 Identities=12% Similarity=0.026 Sum_probs=42.1
Q ss_pred CEEEEccCCCCH--HHHHHHHHHhCCCCCCCCCcceeEEE-eccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQF--GDLMRLFDEYGFPSTAGDITYIDYLF-LGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~--~~l~~~l~~~~~~~~~~~~~~~~~vf-LGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.|.++|||=|.- ..+..++..+.... + -+++ -||....-..+.+....|..+.. .+ +-.||||.-
T Consensus 2 ~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d------~vi~ngen~~~G~g~~~~~~~~l~~~G~----D~-~T~GNHefD 69 (252)
T 2z06_A 2 RVLFIGDVMAEPGLRAVGLHLPDIRDRY-D------LVIANGENAARGKGLDRRSYRLLREAGV----DL-VSLGNHAWD 69 (252)
T ss_dssp EEEEECCBCHHHHHHHHHHHHHHHGGGC-S------EEEEECTTTTTTSSCCHHHHHHHHHHTC----CE-EECCTTTTS
T ss_pred EEEEEEecCCcccHHHHHHHHHHHHhhC-C------EEEEeCCCccCCCCcCHHHHHHHHhCCC----CE-EEeccEeeE
Confidence 378999997764 56667777664322 1 3444 67776544567788888877752 44 455999953
No 236
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=48.21 E-value=2.4e+02 Score=28.87 Aligned_cols=181 Identities=13% Similarity=0.025 Sum_probs=82.2
Q ss_pred CcEEEEEccCCcceEEEeeecCCCCCCcccc--EEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCC
Q 004198 126 DDLYVLDLTNDKFKWHRVVVQGQGPGPRYGH--VMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDR 202 (769)
Q Consensus 126 ~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~h--s~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~ 202 (769)
..+.++|+.+.. -..... ...+...... ++... .+..+++.|+.++ .+.+||+....-.-..+...
T Consensus 180 ~~i~~wd~~~~~--~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-----~v~~wd~~~~~~~~~~~~~h--- 248 (380)
T 3iz6_a 180 QTCVLWDVTTGQ--RISIFG-SEFPSGHTADVLSLSINSLNANMFISGSCDT-----TVRLWDLRITSRAVRTYHGH--- 248 (380)
T ss_dssp SCEEEECTTTCC--EEEEEC-CCSSSSCCSCEEEEEECSSSCCEEEEEETTS-----CEEEEETTTTCCCCEEECCC---
T ss_pred CcEEEEEcCCCc--EEEEee-cccCCCCccCeEEEEeecCCCCEEEEEECCC-----eEEEEECCCCCcceEEECCc---
Confidence 458889998843 322211 1112111111 22221 2446778888665 46778875321011122111
Q ss_pred CCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCC-CCc-ccceEEEEe-CCEEEEEecccC
Q 004198 203 PSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVA-PSP-RYQHAAVFV-GARLHVTGGALR 279 (769)
Q Consensus 203 P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~-P~~-R~~hs~~~~-~~~i~V~GG~~~ 279 (769)
...-.+.....++.+++.|+.++ .+..+|..+.....-....... ... ..-.++++. ++.+++.|+.+
T Consensus 249 --~~~v~~v~~~p~~~~l~s~s~D~------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d- 319 (380)
T 3iz6_a 249 --EGDINSVKFFPDGQRFGTGSDDG------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN- 319 (380)
T ss_dssp --SSCCCEEEECTTSSEEEEECSSS------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-
T ss_pred --CCCeEEEEEecCCCeEEEEcCCC------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-
Confidence 11112344456777888887653 2445555433111111111000 000 011233332 66777776632
Q ss_pred CCCcccCCCcEEEEECCCCcEEe-ccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCC
Q 004198 280 GGRAIEGEAAVAVLDTAAGVWLD-RNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGD 349 (769)
Q Consensus 280 ~~~~~~~~~~v~~yd~~t~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~ 349 (769)
..+.+||+.+.+-.. +...... ...+..+.++.-++..++.||.++.
T Consensus 320 --------g~i~vwd~~~~~~~~~~~~~~~~---------------h~~~v~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 320 --------GDCYVWDTLLAEMVLNLGTLQNS---------------HEGRISCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp --------SCEEEEETTTCCEEEEECCSCSS---------------CCCCCCEEEECSSSSEEEEECTTSC
T ss_pred --------CCEEEEECCCCceEEEEecccCC---------------CCCceEEEEECCCCCEEEEeeCCCC
Confidence 348999987765432 2111110 0123333333345678888888775
No 237
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=46.62 E-value=2.1e+02 Score=28.46 Aligned_cols=128 Identities=10% Similarity=0.022 Sum_probs=64.1
Q ss_pred EEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceE
Q 004198 157 VMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAY 236 (769)
Q Consensus 157 s~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~ 236 (769)
..+...++.+|+.+..+ ..+++||+++. ++..+... ....-++.+...++.+|+....... ....++
T Consensus 49 ~~~~~~~g~l~~~~~~~-----~~i~~~d~~~~--~~~~~~~~----~~~~~~~i~~~~dg~l~v~~~~~~~--~~~~i~ 115 (333)
T 2dg1_A 49 GLNFDRQGQLFLLDVFE-----GNIFKINPETK--EIKRPFVS----HKANPAAIKIHKDGRLFVCYLGDFK--STGGIF 115 (333)
T ss_dssp EEEECTTSCEEEEETTT-----CEEEEECTTTC--CEEEEEEC----SSSSEEEEEECTTSCEEEEECTTSS--SCCEEE
T ss_pred CcEECCCCCEEEEECCC-----CEEEEEeCCCC--cEEEEeeC----CCCCcceEEECCCCcEEEEeCCCCC--CCceEE
Confidence 34344455677766533 36899999887 55544211 1112234444567888886532211 124678
Q ss_pred EEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEec
Q 004198 237 GLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303 (769)
Q Consensus 237 ~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~ 303 (769)
.++........... ... ....-...++- ++.+|+....... ......+++||+++.+...+
T Consensus 116 ~~d~~~~~~~~~~~--~~~-~~~~~~~i~~d~~g~l~v~~~~~~~---~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 116 AATENGDNLQDIIE--DLS-TAYCIDDMVFDSKGGFYFTDFRGYS---TNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EECTTSCSCEEEEC--SSS-SCCCEEEEEECTTSCEEEEECCCBT---TBCCEEEEEECTTSCCEEEE
T ss_pred EEeCCCCEEEEEEc--cCc-cCCcccceEECCCCCEEEEeccccc---cCCCceEEEEeCCCCEEEEe
Confidence 88876442111111 111 11111223332 6777775432110 11135699999988766654
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=46.42 E-value=2.3e+02 Score=27.97 Aligned_cols=168 Identities=14% Similarity=0.183 Sum_probs=85.2
Q ss_pred EEEEECCCC-cEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccc
Q 004198 77 VHLYDVLTR-KWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYG 155 (769)
Q Consensus 77 v~~yD~~~~-~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~ 155 (769)
+++||.... .|..-.. .. ...+.+..++.||+... ...+++||.. ....|..... . . ..
T Consensus 80 l~~~d~~g~~~~~~~~~-----~~-~~~~~~~~~~~l~v~t~-------~~~l~~~d~~-g~~~~~~~~~---~--~-~~ 139 (330)
T 3hxj_A 80 VYAINPDGTEKWRFDTK-----KA-IVSDFTIFEDILYVTSM-------DGHLYAINTD-GTEKWRFKTK---K--A-IY 139 (330)
T ss_dssp EEEECCCGGGGGGSCC-----------CCEEEETTEEEEECT-------TSEEEEECTT-SCEEEEEECS---S--C-CC
T ss_pred EEEECCCCcEEEEEECC-----CC-cccCceEECCEEEEEec-------CCEEEEEcCC-CCEEEEEcCC---C--c-ee
Confidence 888887432 3542211 11 11122333788888542 1358999988 4467876521 1 1 12
Q ss_pred cEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccce
Q 004198 156 HVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADA 235 (769)
Q Consensus 156 hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~ 235 (769)
.+.+...++.+++. ..+ ..+++||.. ....|...... . ...+.+...++.+|+.. ..+
T Consensus 140 ~~~~~~~~g~l~vg-t~~-----~~l~~~d~~-g~~~~~~~~~~-----~-~~~~~~~d~~g~l~v~t---------~~l 197 (330)
T 3hxj_A 140 ATPIVSEDGTIYVG-SND-----NYLYAINPD-GTEKWRFKTND-----A-ITSAASIGKDGTIYFGS---------DKV 197 (330)
T ss_dssp SCCEECTTSCEEEE-CTT-----SEEEEECTT-SCEEEEEECSS-----C-CCSCCEECTTCCEEEES---------SSE
T ss_pred eeeEEcCCCEEEEE-cCC-----CEEEEECCC-CCEeEEEecCC-----C-ceeeeEEcCCCEEEEEe---------CEE
Confidence 22334435566663 321 468999998 55567664321 1 12233333577888753 457
Q ss_pred EEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCc-EEe
Q 004198 236 YGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV-WLD 302 (769)
Q Consensus 236 ~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~-W~~ 302 (769)
+.|+. ++.-.|...... .. -.+.+.. ++.||+... ...+++||..... |..
T Consensus 198 ~~~d~--~g~~~~~~~~~~---~~-~~~~~~~~~g~l~v~t~----------~~gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 198 YAINP--DGTEKWNFYAGY---WT-VTRPAISEDGTIYVTSL----------DGHLYAINPDGTEKWRF 250 (330)
T ss_dssp EEECT--TSCEEEEECCSS---CC-CSCCEECTTSCEEEEET----------TTEEEEECTTSCEEEEE
T ss_pred EEECC--CCcEEEEEccCC---cc-eeceEECCCCeEEEEcC----------CCeEEEECCCCCEeEEe
Confidence 78883 344455544321 11 1223333 457776421 2348888875543 543
No 239
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=44.46 E-value=2.2e+02 Score=27.36 Aligned_cols=181 Identities=8% Similarity=-0.072 Sum_probs=90.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+.+||+. ++...+.... ....-++++.. ++.+|+.... ...+++||.. .+ +..+.... ...
T Consensus 41 ~~v~~~~~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~v~~~d~~-g~--~~~~~~~~---~~~ 104 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEVPT---PDAKVMCLIVSSLGDIWFTENG------ANKIGKLSKK-GG--FTEYPLPQ---PDS 104 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECTT-SC--EEEEECSS---TTC
T ss_pred CeEEEECCC-CceEEEECCC---CCCcceeEEECCCCCEEEEecC------CCeEEEECCC-CC--eEEecCCC---CCC
Confidence 568899988 7777654321 11122334333 3578876431 2458999987 33 44443211 112
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCccc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLA 233 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~ 233 (769)
.-+.++...++.+|+.... .+.+++||+. . +........ ....-+..+...++.+|+.... ..
T Consensus 105 ~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g--~~~~~~~~~---~~~~~~~i~~d~~g~l~v~~~~------~~ 167 (300)
T 2qc5_A 105 GPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-G--TIYEYDLPN---KGSYPAFITLGSDNALWFTENQ------NN 167 (300)
T ss_dssp CEEEEEECSTTCEEEEETT-----TTEEEEECTT-S--CEEEEECSS---TTCCEEEEEECTTSSEEEEETT------TT
T ss_pred CCccceECCCCCEEEEccC-----CCeEEEECCC-C--CEEEccCCC---CCCCceeEEECCCCCEEEEecC------CC
Confidence 2334444445577776432 2358889987 4 333332110 1112233444466778875421 23
Q ss_pred ceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEec
Q 004198 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303 (769)
Q Consensus 234 d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~ 303 (769)
.++.++. ++.......+.. ...-...++- ++.+|+.... ...+.+||+ ++++...
T Consensus 168 ~i~~~~~--~g~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~---------~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 168 SIGRITN--TGKLEEYPLPTN---AAAPVGITSGNDGALWFVEIM---------GNKIGRITT-TGEISEY 223 (300)
T ss_dssp EEEEECT--TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT---------TTEEEEECT-TCCEEEE
T ss_pred eEEEECC--CCcEEEeeCCCC---CCCcceEEECCCCCEEEEccC---------CCEEEEEcC-CCcEEEE
Confidence 5777877 233332222211 1112233333 5678876421 235899998 5665554
No 240
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=44.34 E-value=2.9e+02 Score=28.64 Aligned_cols=194 Identities=11% Similarity=0.104 Sum_probs=91.6
Q ss_pred EEEEECCC--CcEEEecCCCCCCcccccceEEEE---CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 77 VHLYDVLT--RKWTRIRPAGEPPSPRAAHAAAAV---GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 77 v~~yD~~~--~~W~~l~~~g~~P~~R~~hs~~~~---~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
+++|+... .+|+.+... +....-++++.. .+.||+.+..+..+ .-+++.+-.. .+|+++......+.
T Consensus 33 l~~~~~~~~g~~W~~~~~~---~~~~~v~~i~~dp~~~~~l~~g~~~g~~g---~gl~~s~D~G--~tW~~~~~~~~~~~ 104 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPV---FLGHTIHHIVQDPREPERMLMAARTGHLG---PTVFRSDDGG--GNWTEATRPPAFNK 104 (394)
T ss_dssp EEEEEECTTSCSEEEEEEE---STTSEEEEEEECSSSTTCEEEEEEC--CC---EEEEEESSTT--SCCEECSBCCCCCC
T ss_pred eEEEECCCCCCCceECCcc---CCCCceEEEEECCCCCCeEEEEecCCCCC---ccEEEeCCCC--CCceECCccccCCC
Confidence 67777665 689986421 111223444443 35788866432111 2366654333 56998853211121
Q ss_pred C--c-----ccc--EEEEE--C-CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCC--------------Cc
Q 004198 152 P--R-----YGH--VMDLV--S-QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRP--------------SA 205 (769)
Q Consensus 152 ~--R-----~~h--s~~~~--~-~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P--------------~~ 205 (769)
. + ..+ ++++. + .+.+|+.+. ..-+++.+-... +|+.+......| ..
T Consensus 105 ~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~--tW~~~~~~~~~p~~~~~~~~~~~g~~~~ 176 (394)
T 3b7f_A 105 APEGETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGA--SWEPVAGFNDHPMRRAWTGGEQDGTPDG 176 (394)
T ss_dssp CC----CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTS--BCEECHHHHTCTTHHHHHCCC----CCC
T ss_pred cccccccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCC--CeEECcCccCCccccccccccccCCCCC
Confidence 1 1 112 23222 1 456776542 134777765555 899875321111 11
Q ss_pred ccccEEEEec--CCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCC---CCCC-----cccceEEEEeC---CEEE
Q 004198 206 RMYATASARS--DGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPG---VAPS-----PRYQHAAVFVG---ARLH 272 (769)
Q Consensus 206 r~~hsa~~~~--~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~---~~P~-----~R~~hs~~~~~---~~i~ 272 (769)
...++..... .+.+|+.... .-+++.+..- .+|+-..... ..|. ...-+..++.. +.||
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG-~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~ 248 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAG-TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILY 248 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEET-------BEEEEESSTT-SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEE
T ss_pred CceeEEEECCCCCCEEEEEECC-------CCEEEECCCC-CCceECCCCccccccCCCccccCcceeEEEECCCCCCEEE
Confidence 1223443332 3567765321 2355554433 3454332110 1121 12234444432 6676
Q ss_pred EEecccCCCCcccCCCcEEEEECCCCcEEeccC
Q 004198 273 VTGGALRGGRAIEGEAAVAVLDTAAGVWLDRNG 305 (769)
Q Consensus 273 V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 305 (769)
+..+ ..+++++-...+|+.+..
T Consensus 249 vg~~-----------~gl~~s~D~G~tW~~~~~ 270 (394)
T 3b7f_A 249 QQNH-----------CGIYRMDRREGVWKRIGD 270 (394)
T ss_dssp EEET-----------TEEEEEETTTTEEECGGG
T ss_pred EEcC-----------CeEEEeCCCCCcceECCC
Confidence 6321 248888888899999864
No 241
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=43.55 E-value=22 Score=39.75 Aligned_cols=65 Identities=20% Similarity=0.212 Sum_probs=38.9
Q ss_pred EEEEccCCCCHH--------------------HHHHHHHHhCCCCCCCCCcceeEEEeccccCCCCC-----hHHHHHHH
Q 004198 583 VKVFGDLHGQFG--------------------DLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQH-----SLETITLL 637 (769)
Q Consensus 583 i~viGDiHG~~~--------------------~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vDrG~~-----s~e~l~ll 637 (769)
|+-..|+||++. .|..++++....... .-+|.-||.+...+. ...++.+|
T Consensus 6 ILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n-----~llldaGD~~qGs~~~~~~~g~~~i~~m 80 (530)
T 4h1s_A 6 ILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPN-----VLLLDAGDQYQGTIWFTVYKGAEVAHFM 80 (530)
T ss_dssp EEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSS-----EEEEECSCCSCSSHHHHHHTTHHHHHHH
T ss_pred EEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcC-----eEEEEeCCcccchHHHHHhCChHHHHHH
Confidence 677889998753 344444443211111 144558999987652 34455566
Q ss_pred HHhhhcCCCceEEecCCcch
Q 004198 638 LALKIEYPENVHLIRGNHEA 657 (769)
Q Consensus 638 ~~lk~~~p~~v~llrGNHE~ 657 (769)
-.+. -=.+..||||.
T Consensus 81 N~lg-----yDa~~lGNHEF 95 (530)
T 4h1s_A 81 NALR-----YDAMALGNHEF 95 (530)
T ss_dssp HHTT-----CCEEECCGGGG
T ss_pred hccC-----CCEEEEchhhh
Confidence 5553 44678999996
No 242
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=43.28 E-value=2.3e+02 Score=27.09 Aligned_cols=155 Identities=10% Similarity=0.047 Sum_probs=79.9
Q ss_pred eEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeec---CCCCCCccccEEEEEC-CcEEEEEecCCCCCccC
Q 004198 104 AAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ---GQGPGPRYGHVMDLVS-QRYLVSVSGNDGKRVLS 179 (769)
Q Consensus 104 s~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~---g~~p~~R~~hs~~~~~-~~~l~v~GG~~~~~~~~ 179 (769)
|++...+.+|+|=|. -+|+++... ..+...... ..+|. ... ++.... ++.+|+|-| +
T Consensus 28 Ai~~~~g~~y~Fkg~--------~~wr~~~~~--~~~~p~~I~~~wp~Lp~-~iD-Aa~~~~~~~~iyfFkG-------~ 88 (207)
T 1pex_A 28 AITSLRGETMIFKDR--------FFWRLHPQQ--VDAELFLTKSFWPELPN-RID-AAYEHPSHDLIFIFRG-------R 88 (207)
T ss_dssp EEEEETTEEEEEETT--------EEEEECSSS--SCCEEEEHHHHCTTSCS-SCC-EEEEETTTTEEEEEET-------T
T ss_pred EEEeCCCcEEEEECC--------EEEEEeCCC--cCCCceehhHhccCCCC-Ccc-EEEEeccCCcEEEEcc-------C
Confidence 445567888888662 377777544 223222111 12342 122 222332 468999977 4
Q ss_pred ceeEEeCCCCCceE-EEcCCCCCCCCcccccEEEEe-cCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCC--
Q 004198 180 DAWALDTAQKPYVW-QRLNPEGDRPSARMYATASAR-SDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVA-- 255 (769)
Q Consensus 180 dv~~~d~~~~~~~W-~~v~~~~~~P~~r~~hsa~~~-~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~-- 255 (769)
.+|+|+-.+-.-.+ ..+...+-+..+..-.+|... .++++|+|-| +..|+|+..+. + ..++.+
T Consensus 89 ~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~d~~~~---~--~d~gyPr~ 155 (207)
T 1pex_A 89 KFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG--------NQVWRYDDTNH---I--MDKDYPRL 155 (207)
T ss_dssp EEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET--------TEEEEEETTTT---E--ECSSCCCB
T ss_pred EEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC--------CEEEEEeCcCc---c--ccCCCCcc
Confidence 57888643210011 233332222112223445444 3589999976 45788887643 1 111110
Q ss_pred ------CCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 256 ------PSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 256 ------P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
..+.--.++...++++|+|-| +..|.||..+.+=.
T Consensus 156 i~~~~~Gip~~iDaAf~~~g~~YfFkg-----------~~y~rf~~~~~~v~ 196 (207)
T 1pex_A 156 IEEDFPGIGDKVDAVYEKNGYIYFFNG-----------PIQFEYSIWSNRIV 196 (207)
T ss_dssp HHHHSTTSCSCCSEEEEETTEEEEEET-----------TEEEEEETTTTEEE
T ss_pred HHHcCCCCCCCccEEEEcCCcEEEEEC-----------CEEEEEeCCccEEe
Confidence 111112344446899999977 34899998776543
No 243
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=43.20 E-value=3.5e+02 Score=29.28 Aligned_cols=25 Identities=20% Similarity=0.391 Sum_probs=17.2
Q ss_pred CEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 269 ARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 269 ~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
+..++.|+.. ..+.+||..+.+...
T Consensus 219 ~~~l~~~~~d---------g~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 219 GEFVITVGSD---------RKISCFDGKSGEFLK 243 (615)
T ss_dssp CCEEEEEETT---------CCEEEEETTTCCEEE
T ss_pred CCEEEEEeCC---------CeEEEEECCCCCEeE
Confidence 6777777742 348999988776443
No 244
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=42.67 E-value=2.6e+02 Score=27.69 Aligned_cols=218 Identities=8% Similarity=-0.034 Sum_probs=105.7
Q ss_pred ceeecCCCCCCCccccEEEEecccCCCCCEEEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCCC
Q 004198 18 TYWDTDEDAPGPRCGHTLTAVAATKTTGPRLILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEPP 97 (769)
Q Consensus 18 ~~w~~~~~~P~~R~ght~~~v~~~~~~~~~lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~P 97 (769)
...+....+|.+.+.+.++.-+ +++||+.-- ..+.+++||+... .......+
T Consensus 20 ~~~~~~~~~p~~~~pegia~~~-----~g~lyv~d~-------------------~~~~I~~~d~~g~-~~~~~~~~--- 71 (306)
T 2p4o_A 20 APAKIITSFPVNTFLENLASAP-----DGTIFVTNH-------------------EVGEIVSITPDGN-QQIHATVE--- 71 (306)
T ss_dssp CCEEEEEEECTTCCEEEEEECT-----TSCEEEEET-------------------TTTEEEEECTTCC-EEEEEECS---
T ss_pred CCceEeEeCCCCCCcceEEECC-----CCCEEEEeC-------------------CCCeEEEECCCCc-eEEEEeCC---
Confidence 3344444555555555555432 456887742 1356899998764 33222221
Q ss_pred cccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCC
Q 004198 98 SPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKR 176 (769)
Q Consensus 98 ~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~ 176 (769)
..-++++.. ++.+|+...... ...+++||..+ .+...+. ..+..+.....+...+..+|+.-.
T Consensus 72 --~~p~gia~~~dG~l~vad~~~~----~~~v~~~d~~~--g~~~~~~---~~~~~~~~~g~~~~~~~~~~v~d~----- 135 (306)
T 2p4o_A 72 --GKVSGLAFTSNGDLVATGWNAD----SIPVVSLVKSD--GTVETLL---TLPDAIFLNGITPLSDTQYLTADS----- 135 (306)
T ss_dssp --SEEEEEEECTTSCEEEEEECTT----SCEEEEEECTT--SCEEEEE---ECTTCSCEEEEEESSSSEEEEEET-----
T ss_pred --CCceeEEEcCCCcEEEEeccCC----cceEEEEcCCC--CeEEEEE---eCCCccccCcccccCCCcEEEEEC-----
Confidence 122444443 456877653211 12488899877 3455543 223444444555556667777532
Q ss_pred ccCceeEEeCCCCCc-eEEEcCCCC-CCCCcc-cccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCce----EEE
Q 004198 177 VLSDAWALDTAQKPY-VWQRLNPEG-DRPSAR-MYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQW----EWT 249 (769)
Q Consensus 177 ~~~dv~~~d~~~~~~-~W~~v~~~~-~~P~~r-~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W----~W~ 249 (769)
....+|++|+.+... .|..-.... ..+... .........++.+|+.-- ..+.++.|+...++.. .+.
T Consensus 136 ~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~------~~~~I~~~~~~~~g~~~~~~~~~ 209 (306)
T 2p4o_A 136 YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT------EKMLLLRIPVDSTDKPGEPEIFV 209 (306)
T ss_dssp TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET------TTTEEEEEEBCTTSCBCCCEEEE
T ss_pred CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC------CCCEEEEEEeCCCCCCCccEEEe
Confidence 134799999876411 121111000 001111 111122233457887532 2356888887642221 111
Q ss_pred eCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 250 LAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 250 ~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
.. ..-..+++- ++.+||.-.. .+.|.+||++ ++...
T Consensus 210 ~~-------~~P~gi~vd~dG~l~va~~~---------~~~V~~~~~~-G~~~~ 246 (306)
T 2p4o_A 210 EQ-------TNIDDFAFDVEGNLYGATHI---------YNSVVRIAPD-RSTTI 246 (306)
T ss_dssp ES-------CCCSSEEEBTTCCEEEECBT---------TCCEEEECTT-CCEEE
T ss_pred cc-------CCCCCeEECCCCCEEEEeCC---------CCeEEEECCC-CCEEE
Confidence 11 112334443 5678877431 3458999986 44433
No 245
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=42.64 E-value=4.4e+02 Score=30.26 Aligned_cols=238 Identities=16% Similarity=0.194 Sum_probs=110.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCcc---cccceEEEEC----CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCC
Q 004198 76 SVHLYDVLTRKWTRIRPAGEPPSP---RAAHAAAAVG----TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQ 148 (769)
Q Consensus 76 dv~~yD~~~~~W~~l~~~g~~P~~---R~~hs~~~~~----~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~ 148 (769)
-+|+.+-...+|+.+... +... ......++++ +.||+..|............+|-......+|+++...-.
T Consensus 46 gv~rS~D~G~tW~~i~~~--~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~ 123 (737)
T 2cn3_A 46 GAYRWDPSTETWIPLLDH--FQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFK 123 (737)
T ss_dssp CEEEEETTTTEEEECCTT--CCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSC
T ss_pred cEEEeCCCCCCEEECcCc--cCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcc
Confidence 588888888899997642 1111 1122333332 578887653211111112334444444467998863211
Q ss_pred ----CCCCccccEEEEE--CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCC-----Ccc---c----ccE
Q 004198 149 ----GPGPRYGHVMDLV--SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRP-----SAR---M----YAT 210 (769)
Q Consensus 149 ----~p~~R~~hs~~~~--~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P-----~~r---~----~hs 210 (769)
+|.....+.+++. +...+|+. ...+ .-+|+ .....-+|+++....... +.+ . .+.
T Consensus 124 ~~~~~~g~~~~~~l~~~p~~~~~v~~g-~~~g----~gl~~--S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~ 196 (737)
T 2cn3_A 124 MGGNMPGRSMGERLAIDPNDNRILYLG-TRCG----NGLWR--STDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVW 196 (737)
T ss_dssp CCTTSTTTTSCCCEEECSSCTTCEEEE-CSTT----CCEEE--ESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEE
T ss_pred cCCCcCcccccceEEECCCCCCEEEEe-eccC----CcEEE--eCCCCcceecccCCCCCcccccCcccccccCCCCEEE
Confidence 2222233455443 22355553 2111 22443 222223799887532110 000 0 111
Q ss_pred EEEec--------CCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCC
Q 004198 211 ASARS--------DGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGG 281 (769)
Q Consensus 211 a~~~~--------~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~ 281 (769)
..+.. .+.+|+.-+. . + ..+|+-... .. +|..+.+. |.....|.+++. .+.+|+..+-..+.
T Consensus 197 v~~dp~~~~~~~~~~~v~~~~~~-~-~---~~v~~S~Dg-G~--tW~~~~~~-p~~~~~~~~~~~~~~~l~~~~~d~~g~ 267 (737)
T 2cn3_A 197 VVFDKSSSTPGNPTKTIYVGVAD-K-N---ESIYRSTDG-GV--TWKAVPGQ-PKGLLPHHGVLASNGMLYITYGDTCGP 267 (737)
T ss_dssp EEECGGGSCTTSCCSCEEEEESC-S-S---CCEEEESST-TS--CCEECTTC-CCSSEEEEEEECTTSEEEEEEESSCCS
T ss_pred EEcCCCCcccCCCCCEEEEEecC-C-C---ccEEEEcCC-CC--ceEECCCC-CCcccceEEEECCCCeEEEEecCCCCc
Confidence 12111 1256653211 1 0 124443322 22 46666544 444444555543 77888876532111
Q ss_pred CcccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeC----CEEEEEcC
Q 004198 282 RAIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIG----VRIYIYGG 345 (769)
Q Consensus 282 ~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~----~~iyv~GG 345 (769)
........++.++-...+|+.+...+... ...+++.+...+. +.||+.+.
T Consensus 268 y~~~~~g~v~~s~d~G~tW~~i~~~~~~~--------------~~~~~~~~~i~v~p~~~~~ly~~~~ 321 (737)
T 2cn3_A 268 YDGNGKGQVWKFNTRTGEWIDITPIPYSS--------------SDNRFCFAGLAVDRQNPDIIMVTSM 321 (737)
T ss_dssp SCCSCCEEEEEEETTTCCEEECCSSCTTS--------------TTCCSEEEEEEECTTCTTCEEEEEE
T ss_pred cccccCceEEEEeCCCCCEEEccCCCCCC--------------cccccccccEEEcCCCCCEEEEEec
Confidence 00012456999999999999987753310 0135555544443 47888765
No 246
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=41.26 E-value=3.7e+02 Score=29.01 Aligned_cols=156 Identities=11% Similarity=0.033 Sum_probs=77.9
Q ss_pred eEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecC---CCCCCccccEEEEE-CCcEEEEEecCCCCCccC
Q 004198 104 AAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQG---QGPGPRYGHVMDLV-SQRYLVSVSGNDGKRVLS 179 (769)
Q Consensus 104 s~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g---~~p~~R~~hs~~~~-~~~~l~v~GG~~~~~~~~ 179 (769)
+++.+.+.+|+|=|. -+|+++... ..+....... .+|.. .. ++... .++.+|+|=| +
T Consensus 267 Ai~~~~ge~y~Fkg~--------~~wr~~~~~--~~~~p~~I~~~Wp~LP~~-iD-Aa~~~~~~g~~~fFKg-------~ 327 (450)
T 1su3_A 267 AITTIRGEVMFFKDR--------FYMRTNPFY--PEVELNFISVFWPQLPNG-LE-AAYEFADRDEVRFFKG-------N 327 (450)
T ss_dssp EEEEETTEEEEEETT--------EEEECCTTS--SSCEEEEGGGTCTTSCSS-CC-EEEEEGGGTEEEEEET-------T
T ss_pred eEEecCCeEEEEeCC--------EEEEEcCCC--CcccceehhHhccCCCCC-ee-EEEEEcCCCeEEEEeC-------C
Confidence 455678899998773 266666544 2233222211 22322 11 22222 2458888877 3
Q ss_pred ceeEEeCCCCCceE-EEcC-CCCCCCCcccccEEEEe-cCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCC--
Q 004198 180 DAWALDTAQKPYVW-QRLN-PEGDRPSARMYATASAR-SDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGV-- 254 (769)
Q Consensus 180 dv~~~d~~~~~~~W-~~v~-~~~~~P~~r~~hsa~~~-~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~-- 254 (769)
.+|+|+..+-.-.+ ..+. ..+-+..+..--+|... .++++|+|-| +..|+|+.... + ..++.
T Consensus 328 ~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG--------~~yw~yd~~~~---~--~~~gYPk 394 (450)
T 1su3_A 328 KYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA--------NKYWRYDEYKR---S--MDPGYPK 394 (450)
T ss_dssp EEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTT---E--ECSSCSE
T ss_pred EEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC--------CEEEEEeCCCc---c--ccCCCCc
Confidence 57887642200000 1111 11111112222344433 4689999876 46788886532 1 11111
Q ss_pred ------CCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 255 ------APSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 255 ------~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
+..+.--.++...++++|+|-| +..|.||..+.+-..
T Consensus 395 ~I~~~fpgip~~iDAA~~~~g~~YFFkg-----------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 395 MIAHDFPGIGHKVDAVFMKDGFFYFFHG-----------TRQYKFDPKTKRILT 437 (450)
T ss_dssp EHHHHSTTSCSCCSEEEEETTEEEEEET-----------TEEEEEETTTTEEEE
T ss_pred chhhcCCCCCCCccEEEEcCCeEEEEeC-----------CEEEEEECCcceEec
Confidence 1111112344456899999977 348999988776443
No 247
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=41.23 E-value=2.8e+02 Score=27.48 Aligned_cols=98 Identities=11% Similarity=0.159 Sum_probs=49.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEE---ECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA---VGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~---~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
+.+.+||+.+.+...+.... . .-.+++. -++.+++.|+. ...+.+||+.+...... +. .+
T Consensus 108 g~v~iwd~~~~~~~~~~~~~---~--~v~~~~~~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~-~~----~~- 170 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQHD---A--PVKTIHWIKAPNYSCVMTGSW------DKTLKFWDTRSSNPMMV-LQ----LP- 170 (368)
T ss_dssp SEEEEEETTTTEEEEEEECS---S--CEEEEEEEECSSCEEEEEEET------TSEEEEECSSCSSCSEE-EE----CS-
T ss_pred CcEEEEEcCCCCceeecccc---C--ceEEEEEEeCCCCCEEEEccC------CCcEEEEECCCCcEEEE-Ee----cC-
Confidence 46888999888766543221 1 1112222 24566666664 24589999887432221 21 11
Q ss_pred CccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcC
Q 004198 152 PRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLN 197 (769)
Q Consensus 152 ~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~ 197 (769)
....++....+ .+++.++ + ..+.+||.......+..+.
T Consensus 171 -~~~~~~~~~~~-~~~~~~~-~-----~~i~~~~~~~~~~~~~~~~ 208 (368)
T 3mmy_A 171 -ERCYCADVIYP-MAVVATA-E-----RGLIVYQLENQPSEFRRIE 208 (368)
T ss_dssp -SCEEEEEEETT-EEEEEEG-G-----GCEEEEECSSSCEEEEECC
T ss_pred -CCceEEEecCC-eeEEEeC-C-----CcEEEEEeccccchhhhcc
Confidence 12223323333 4444433 2 3477788876644555554
No 248
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=40.86 E-value=3.4e+02 Score=28.39 Aligned_cols=157 Identities=10% Similarity=0.041 Sum_probs=78.3
Q ss_pred eEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeec-CCCCCCccccEEEEE-CCcEEEEEecCCCCCccCce
Q 004198 104 AAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ-GQGPGPRYGHVMDLV-SQRYLVSVSGNDGKRVLSDA 181 (769)
Q Consensus 104 s~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~-g~~p~~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv 181 (769)
+++.+.+.+|+|=|. -+|+++.......=..+... ..+|. ... ++... .++.+|+|-| +.+
T Consensus 185 Av~~~~g~~~fFkg~--------~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iD-Aa~~~~~~g~~~fFkg-------~~y 247 (365)
T 3ba0_A 185 AVTTVGNKIFFFKDR--------FFWLKVSERPKTSVNLISSLWPTLPS-GIE-AAYEIEARNQVFLFKD-------DKY 247 (365)
T ss_dssp CEEEETTEEEEEETT--------EEEECCSSCCCCCEEEHHHHCSSCCS-SCC-EEEEEGGGTEEEEEET-------TEE
T ss_pred eEEEcCCeEEEEeCC--------EEEEEcCCCccCCccchhhhccCCCC-Ccc-EEEEecCCCEEEEEeC-------CEE
Confidence 345567788887652 26666543311110111100 12332 222 22233 3558888877 457
Q ss_pred eEEeCCCCCceE-EEcCCCCCCCC-cccccEEEEe-cCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCC----
Q 004198 182 WALDTAQKPYVW-QRLNPEGDRPS-ARMYATASAR-SDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGV---- 254 (769)
Q Consensus 182 ~~~d~~~~~~~W-~~v~~~~~~P~-~r~~hsa~~~-~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~---- 254 (769)
|+|+.....-.+ ..+...+ .|. +..-.+|... .++++|+|-| +..|+|+..+. +- .++.
T Consensus 248 Wr~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~~~~yfFkG--------~~yw~yd~~~~---~v--~~gyPk~I 313 (365)
T 3ba0_A 248 WLISNLRPEPNYPKSIHSFG-FPNFVKKIDAAVFNPRFYRTYFFVD--------NQYWRYDERRQ---MM--DPGYPKLI 313 (365)
T ss_dssp EECSTTSCTTTCSEETTTTT-CCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTT---EE--CSSCCCCH
T ss_pred EEEcCCcccCCCCceeeecc-CCCCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeCCcc---ee--cCCCCcch
Confidence 777643221112 2333322 222 2233455544 4689999866 46788887543 21 1111
Q ss_pred ----CCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 255 ----APSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 255 ----~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
+..+.--.++... ++++|+|=| +..|.||..+.+-..
T Consensus 314 ~~~f~g~p~~iDaA~~~~~g~~YfFkg-----------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 314 TKNFQGIGPKIDAVFYSKNKYYYFFQG-----------SNQFEYDFLLQRITK 355 (365)
T ss_dssp HHHSTTCCSSCSEEEEETTTEEEEEET-----------TEEEEEETTTTEEEE
T ss_pred hhcCCCCCCccceeeEecCCcEEEEeC-----------CEEEEEECCccEEec
Confidence 1112222344444 789999976 348999998876544
No 249
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=40.41 E-value=3.1e+02 Score=27.81 Aligned_cols=125 Identities=13% Similarity=0.052 Sum_probs=60.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~ 152 (769)
+.+..+|+.+.+....-.. ....-.++.+ ++..++.|+. ...+.+||+.+. +-.... .....
T Consensus 220 g~v~~wd~~~~~~~~~~~~-----h~~~v~~v~~~p~~~~l~s~s~------D~~v~lwd~~~~--~~~~~~---~~~~~ 283 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFET-----HESDVNSVRYYPSGDAFASGSD------DATCRLYDLRAD--REVAIY---SKESI 283 (354)
T ss_dssp SCEEEEETTTCCEEEEECC-----CSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTT--EEEEEE---CCTTC
T ss_pred CeEEEEECCCCcEEEEecC-----CCCCeEEEEEeCCCCEEEEEeC------CCeEEEEECCCC--cEEEEE---cCCCc
Confidence 5688889888765433211 0011112222 3455566653 234889999873 222221 11111
Q ss_pred ccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 153 RYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 153 R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
..+...+.+ .++.+++.|+.++ .+.+||+.+.. .-..+... . ..-.+.....++.+++.|+.+
T Consensus 284 ~~~~~~~~~s~~g~~l~~g~~d~-----~i~vwd~~~~~-~~~~l~~h----~-~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 284 IFGASSVDFSLSGRLLFAGYNDY-----TINVWDVLKGS-RVSILFGH----E-NRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp CSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCS-EEEEECCC----S-SCEEEEEECTTSSCEEEEETT
T ss_pred ccceeEEEEeCCCCEEEEEECCC-----cEEEEECCCCc-eEEEEECC----C-CcEEEEEECCCCCEEEEEcCC
Confidence 222233333 3446666676554 47888886652 12222211 1 111233445677777777754
No 250
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=40.11 E-value=3.4e+02 Score=28.17 Aligned_cols=103 Identities=12% Similarity=-0.039 Sum_probs=51.8
Q ss_pred cEEEEECCCCcEEEecCCCCCCcccccceEEE-ECCEEEEECccC---CCCCCcCcEEEEEccCCcceEEEeeecCCC-C
Q 004198 76 SVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAA-VGTMVVFQGGIG---PAGHSTDDLYVLDLTNDKFKWHRVVVQGQG-P 150 (769)
Q Consensus 76 dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~-~~~~Iyv~GG~~---~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~-p 150 (769)
.+++||+.+++-...-+.| ...+-+.. -+..+|+..-.. ..+...+.+.+||+.+.+ ....+++.+.. +
T Consensus 48 ~v~v~D~~t~~~~~~i~~g-----~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~-~~~~i~~~~~~~~ 121 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGG-----FLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL-PIADIELPDAPRF 121 (373)
T ss_pred EEEEEECCCCeEEEEecCC-----CCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc-EEEEEECCCcccc
Confidence 7899999987643222222 22232332 345888875321 112235678999998732 23334321010 0
Q ss_pred -CCccccEEEEE-CCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 151 -GPRYGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 151 -~~R~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
....-+.+.+. +++.+|+..-. ..+.++++| ++.
T Consensus 122 ~~g~~p~~~~~spDG~~l~v~n~~----~~~~v~viD-~t~ 157 (373)
T 2mad_H 122 DVGPYSWMNANTPNNADLLFFQFA----AGPAVGLVV-QGG 157 (373)
T ss_pred ccCCCccceEECCCCCEEEEEecC----CCCeEEEEE-CCC
Confidence 00111233233 45577775321 135689999 876
No 251
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=39.88 E-value=4.4e+02 Score=29.58 Aligned_cols=58 Identities=19% Similarity=0.153 Sum_probs=30.5
Q ss_pred EEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEE-cCCCCCCCCcccccEEEEecCCEEEEEcccCC
Q 004198 158 MDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQR-LNPEGDRPSARMYATASARSDGMFLLCGGRDA 227 (769)
Q Consensus 158 ~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~-v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~ 227 (769)
++...++.+++.|+.++ .+.++|+.+. +-.. +.. ....-.+.....++..++.|+.+.
T Consensus 436 v~~s~~g~~l~sgs~Dg-----~v~vwd~~~~--~~~~~~~~-----h~~~v~~~~~s~~~~~l~s~s~D~ 494 (694)
T 3dm0_A 436 VVLSSDGQFALSGSWDG-----ELRLWDLAAG--VSTRRFVG-----HTKDVLSVAFSLDNRQIVSASRDR 494 (694)
T ss_dssp EEECTTSSEEEEEETTS-----EEEEEETTTT--EEEEEEEC-----CSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEECCCCCEEEEEeCCC-----cEEEEECCCC--cceeEEeC-----CCCCEEEEEEeCCCCEEEEEeCCC
Confidence 33344556777777654 4788888776 2211 111 111122333446777777777643
No 252
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=39.85 E-value=42 Score=33.59 Aligned_cols=65 Identities=17% Similarity=0.054 Sum_probs=40.2
Q ss_pred CEEEEccCCCCH--HHHHHHHHHhCCCCCCCCCcceeEEE-eccccCCCCChHHHHHHHHHhhhcCCCceEEecCCcchh
Q 004198 582 PVKVFGDLHGQF--GDLMRLFDEYGFPSTAGDITYIDYLF-LGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAA 658 (769)
Q Consensus 582 ~i~viGDiHG~~--~~l~~~l~~~~~~~~~~~~~~~~~vf-LGD~vDrG~~s~e~l~ll~~lk~~~p~~v~llrGNHE~~ 658 (769)
.|.++|||=|.. ..+..+++.+.... + -+++ .||....-+.+.+....|..+.. .+ +-.||||.-
T Consensus 2 ~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d------~vi~nge~~~~G~g~~~~~~~~l~~~G~----Da-~TlGNHefD 69 (255)
T 1t70_A 2 RVLFIGDVFGQPGRRVLQNHLPTIRPQF-D------FVIVNMENSAGGFGMHRDAARGALEAGA----GC-LTLGNHAWH 69 (255)
T ss_dssp EEEEECCBBHHHHHHHHHHHHHHHGGGC-S------EEEEECTBTTTTSSCCHHHHHHHHHHTC----SE-EECCTTTTS
T ss_pred EEEEEeccCChHHHHHHHHHHHHHHhhC-C------EEEECCCCccCCcCCCHHHHHHHHhCCC----CE-EEecccccc
Confidence 378999998875 45566666654221 1 3455 55554432566777788777742 33 445999964
No 253
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=39.61 E-value=2.6e+02 Score=26.80 Aligned_cols=181 Identities=9% Similarity=-0.020 Sum_probs=89.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+++||+. +++..+.... ....-++++.. ++.+|+.... ...+++||+. .. ........ ...
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~--~~~~~~~~---~~~ 146 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQ---PDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GT--IYEYDLPN---KGS 146 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS---TTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SC--EEEEECSS---TTC
T ss_pred CeEEEECCC-CCeEEecCCC---CCCCCccceECCCCCEEEEccC------CCeEEEECCC-CC--EEEccCCC---CCC
Confidence 468889888 7776554321 11222344433 4678876432 2358899886 32 33332111 112
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCccc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLA 233 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~ 233 (769)
.-+.++...++.+|+.... ...+++||. +. ++..+..... ...-...+...++.+|+.... .+
T Consensus 147 ~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g--~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~------~~ 209 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTENQ-----NNSIGRITN-TG--KLEEYPLPTN---AAAPVGITSGNDGALWFVEIM------GN 209 (300)
T ss_dssp CEEEEEECTTSSEEEEETT-----TTEEEEECT-TC--CEEEEECSST---TCCEEEEEECTTSSEEEEETT------TT
T ss_pred CceeEEECCCCCEEEEecC-----CCeEEEECC-CC--cEEEeeCCCC---CCCcceEEECCCCCEEEEccC------CC
Confidence 2234444444567775431 245899998 44 4444322111 111123334457788875421 23
Q ss_pred ceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcEEec
Q 004198 234 DAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLDR 303 (769)
Q Consensus 234 d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~~ 303 (769)
.++.++. ++.+.....+.. ...-+++++- ++.+||.... .+.+.+||+ +.+....
T Consensus 210 ~i~~~~~--~g~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~---------~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 210 KIGRITT--TGEISEYDIPTP---NARPHAITAGKNSEIWFTEWG---------ANQIGRITN-DNTIQEY 265 (300)
T ss_dssp EEEEECT--TCCEEEEECSST---TCCEEEEEECSTTCEEEEETT---------TTEEEEECT-TSCEEEE
T ss_pred EEEEEcC--CCcEEEEECCCC---CCCceEEEECCCCCEEEeccC---------CCeEEEECC-CCcEEEE
Confidence 4777776 344444333211 1111333333 5678876521 245889998 4555544
No 254
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=39.51 E-value=1.9e+02 Score=33.25 Aligned_cols=121 Identities=9% Similarity=0.071 Sum_probs=59.9
Q ss_pred cEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 76 SVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 76 dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
-+++||+.+++++.+...+ .+....-.+++.. ++.||+... +-+.+||+.+. ++..... ..+|. ..
T Consensus 494 Gl~~~d~~~~~~~~~~~~~-~~~~~~~~~i~~d~~g~lWigt~--------~Gl~~~~~~~~--~~~~~~~-~gl~~-~~ 560 (758)
T 3ott_A 494 GIDKINPRTREVTKLFADE-LTGEKSPNYLLCDEDGLLWVGFH--------GGVMRINPKDE--SQQSISF-GSFSN-NE 560 (758)
T ss_dssp SEEEEETTTTEEEEECTTT-SCGGGCEEEEEECTTSCEEEEET--------TEEEEECC--C--CCCBCCC-CC----CC
T ss_pred CcEEEeCCCCceEEecCCC-cCCCcccceEEECCCCCEEEEec--------CceEEEecCCC--ceEEecc-cCCCc-cc
Confidence 4889999999999875321 1111111222222 357887431 12899998873 3444321 22332 12
Q ss_pred ccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEc
Q 004198 155 GHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCG 223 (769)
Q Consensus 155 ~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~G 223 (769)
-.++.. .++.|++... +-+.+||+.+. +...... |......++....+|.||+.|
T Consensus 561 i~~i~~-~~g~lWi~t~-------~Gl~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~G~l~fG~ 615 (758)
T 3ott_A 561 ILSMTC-VKNSIWVSTT-------NGLWIIDRKTM--DARQQNM----TNKRFTSLLFDPKEDCVYLGG 615 (758)
T ss_dssp EEEEEE-ETTEEEEEES-------SCEEEEETTTC--CEEEC------CCCCCSEEEEETTTTEEEEEC
T ss_pred eEEEEE-CCCCEEEECC-------CCeEEEcCCCc--eeEEecC----CCCceeeeEEECCCCcEEEec
Confidence 223333 4557777542 34899999887 4443321 222222223333578887643
No 255
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=39.36 E-value=3.6e+02 Score=28.30 Aligned_cols=195 Identities=15% Similarity=0.083 Sum_probs=95.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCcc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRY 154 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~ 154 (769)
+.++++|+.+++-..+...+.. ++ .+....++.+|+....+. ..++++|..+.. ....+.... .+....
T Consensus 152 ~~I~~id~~~g~~~~~~~~~~~--~~--ia~~~~g~~l~~~d~~~~-----~~I~~~d~~~~~-~~~~~g~~~-~~~~~~ 220 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPGFKG--GK--PAVTKDKQRVYSIGWEGT-----HTVYVYMKASGW-APTRIGQLG-STFSGK 220 (409)
T ss_dssp TEEEEEETTTTEEEEEEETCCB--CB--CEECTTSSEEEEEBSSTT-----CEEEEEEGGGTT-CEEEEEECC-TTSCSC
T ss_pred CcEEEEECCCCEEEEeeccCCC--Cc--eeEecCCCcEEEEecCCC-----ceEEEEEcCCCc-eeEEeeecc-chhcCC
Confidence 5688899988876665433211 11 122222457777654321 169999987632 222331101 101122
Q ss_pred ccEEEEEC-CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccc--cEEEEec-CCEEEEEcccCCCCC
Q 004198 155 GHVMDLVS-QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMY--ATASARS-DGMFLLCGGRDASGA 230 (769)
Q Consensus 155 ~hs~~~~~-~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~--hsa~~~~-~g~l~v~GG~~~~~~ 230 (769)
-+.+++.. ++.||+... ...+++||+.+. ....+...+........ +..+... ++.||+....
T Consensus 221 p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~--~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~----- 287 (409)
T 3hrp_A 221 IGAVALDETEEWLYFVDS------NKNFGRFNVKTQ--EVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN----- 287 (409)
T ss_dssp CCBCEECTTSSEEEEECT------TCEEEEEETTTC--CEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-----
T ss_pred cEEEEEeCCCCeEEEEEC------CCcEEEEECCCC--CEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-----
Confidence 23444444 568888321 236999999876 33333111111111111 1444445 6899986422
Q ss_pred cccceEEEecCCCCceEEEeCCC-CCC-------Ccc--cceEEEEe-CCEEEEEec-ccCCCCcccCCCcEEEEECCCC
Q 004198 231 PLADAYGLLMHRNGQWEWTLAPG-VAP-------SPR--YQHAAVFV-GARLHVTGG-ALRGGRAIEGEAAVAVLDTAAG 298 (769)
Q Consensus 231 ~l~d~~~ld~~~~~~W~W~~~~~-~~P-------~~R--~~hs~~~~-~~~i~V~GG-~~~~~~~~~~~~~v~~yd~~t~ 298 (769)
.+.+++++.... .....-.. ... ..+ .-..+++- ++.|||.-. . ...|.++|+.++
T Consensus 288 -~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~---------~~~I~~~~~~~G 355 (409)
T 3hrp_A 288 -LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK---------GYCLRKLDILDG 355 (409)
T ss_dssp -TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT---------TCEEEEEETTTT
T ss_pred -CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC---------CCEEEEEECCCC
Confidence 345777776532 12111111 000 011 12334443 567888743 1 245899997777
Q ss_pred cEEeccC
Q 004198 299 VWLDRNG 305 (769)
Q Consensus 299 ~W~~~~~ 305 (769)
....+..
T Consensus 356 ~v~~~~g 362 (409)
T 3hrp_A 356 YVSTVAG 362 (409)
T ss_dssp EEEEEEE
T ss_pred EEEEEeC
Confidence 6655543
No 256
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=38.96 E-value=3.7e+02 Score=28.25 Aligned_cols=62 Identities=16% Similarity=0.085 Sum_probs=35.0
Q ss_pred cccEEEEECCcEEEEEecCCCCC----ccCceeEEeCCCCCceEEEcCCCCCCC----CcccccEEEEecCCEEEEEcc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKR----VLSDAWALDTAQKPYVWQRLNPEGDRP----SARMYATASARSDGMFLLCGG 224 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~----~~~dv~~~d~~~~~~~W~~v~~~~~~P----~~r~~hsa~~~~~g~l~v~GG 224 (769)
..|++++..++.+|.+|-+...+ ...+.. .-.++....... .....|+++...++.+|.+|-
T Consensus 182 ~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~---------~p~~v~~~~~~~i~~va~G~~ht~~l~~~G~v~~wG~ 251 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL---------VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGW 251 (406)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEE---------EEEECCCSTTCCEEEEEECSSEEEEEETTCCEEEEEC
T ss_pred CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcC---------ccEEecccCCceEEEEEECCCcEEEEcCCCCEEEeeC
Confidence 46788888888999999654321 111111 112221111000 123468888888999999984
No 257
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=38.39 E-value=2.8e+02 Score=28.98 Aligned_cols=109 Identities=6% Similarity=0.025 Sum_probs=57.1
Q ss_pred CCEEEEECccCCCCCCcCcEEEEEccCCcceEE-EeeecCCCCCCc-cccEEEEE-CCcEEEEEecCCCCCccCceeEEe
Q 004198 109 GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWH-RVVVQGQGPGPR-YGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALD 185 (769)
Q Consensus 109 ~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~-~~~~~g~~p~~R-~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d 185 (769)
++++|+|=| +.+|+|+.......+- .+... ..|..- .=-++... .++++|+|-| +..|+||
T Consensus 236 ~g~~~fFkg--------~~yWr~~~~~~~~gyPk~I~~~-GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd 299 (365)
T 3ba0_A 236 RNQVFLFKD--------DKYWLISNLRPEPNYPKSIHSF-GFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYD 299 (365)
T ss_dssp GTEEEEEET--------TEEEECSTTSCTTTCSEETTTT-TCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEE
T ss_pred CCEEEEEeC--------CEEEEEcCCcccCCCCceeeec-cCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEe
Confidence 678999866 3478876443111121 22111 133321 11233334 3468899877 5689999
Q ss_pred CCCCCceEEEcCCC----CCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCC
Q 004198 186 TAQKPYVWQRLNPE----GDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN 243 (769)
Q Consensus 186 ~~~~~~~W~~v~~~----~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~ 243 (769)
..+. +-..-.+. +-+..+..-.++....++.+|+|-| +..|+|+..+.
T Consensus 300 ~~~~--~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg--------~~ywr~d~~~~ 351 (365)
T 3ba0_A 300 ERRQ--MMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG--------SNQFEYDFLLQ 351 (365)
T ss_dssp TTTT--EECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEET--------TEEEEEETTTT
T ss_pred CCcc--eecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeC--------CEEEEEECCcc
Confidence 8664 21110000 0011223345666666889999866 45788887644
No 258
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=38.20 E-value=1.7e+02 Score=30.58 Aligned_cols=68 Identities=4% Similarity=-0.066 Sum_probs=38.9
Q ss_pred CCEEEEECccC---CCCCCcCcEEEEEccCCcceE-EEeeecCCCCCCccccEEEEEC-Cc-EEEEEecCCCCCccCcee
Q 004198 109 GTMVVFQGGIG---PAGHSTDDLYVLDLTNDKFKW-HRVVVQGQGPGPRYGHVMDLVS-QR-YLVSVSGNDGKRVLSDAW 182 (769)
Q Consensus 109 ~~~Iyv~GG~~---~~~~~~~dl~~~d~~t~~~~W-~~~~~~g~~p~~R~~hs~~~~~-~~-~l~v~GG~~~~~~~~dv~ 182 (769)
++.+|+..... ......++++++|+.+. +- .+++ .+..-+.+.+.. ++ .+|+..+. .++|.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~--~vv~~i~------~g~~p~~i~~s~Dg~~~l~v~~~~-----~~~V~ 344 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--QTSSQIS------LGHDVDAISVAQDGGPDLYALSAG-----TEVLH 344 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCC--EEEEEEE------CCCCcCeEEECCCCCeEEEEEcCC-----CCeEE
Confidence 46899975421 12224578999999883 33 3332 222334444443 33 45553321 26899
Q ss_pred EEeCCCC
Q 004198 183 ALDTAQK 189 (769)
Q Consensus 183 ~~d~~~~ 189 (769)
++|+.+.
T Consensus 345 ViD~~t~ 351 (373)
T 2mad_H 345 IYDAGAG 351 (373)
T ss_pred EEECCCC
Confidence 9999876
No 259
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=38.00 E-value=2.2e+02 Score=29.70 Aligned_cols=108 Identities=9% Similarity=0.014 Sum_probs=52.6
Q ss_pred CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecC
Q 004198 162 SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMH 241 (769)
Q Consensus 162 ~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~ 241 (769)
.+..+++.|+.++ .+.+||..+....- .+.. ....-.+.....++.+++.|+.+.. +..++..
T Consensus 118 p~~~~l~s~s~Dg-----~i~vwd~~~~~~~~-~l~~-----h~~~V~~v~~~~~~~~l~sgs~D~~------i~iwd~~ 180 (410)
T 1vyh_C 118 PVFSVMVSASEDA-----TIKVWDYETGDFER-TLKG-----HTDSVQDISFDHSGKLLASCSADMT------IKLWDFQ 180 (410)
T ss_dssp SSSSEEEEEESSS-----CEEEEETTTCCCCE-EECC-----CSSCEEEEEECTTSSEEEEEETTSC------CCEEETT
T ss_pred CCCCEEEEEeCCC-----eEEEEECCCCcEEE-EEec-----cCCcEEEEEEcCCCCEEEEEeCCCe------EEEEeCC
Confidence 3345777777655 47788887762221 1111 1111123334467778888876543 2333443
Q ss_pred CCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCcE
Q 004198 242 RNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300 (769)
Q Consensus 242 ~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W 300 (769)
.. +....-. .....-.++++. ++..++.|+.. ..+.+||..+..-
T Consensus 181 ~~---~~~~~~~--~h~~~V~~v~~~p~~~~l~s~s~D---------~~i~~wd~~~~~~ 226 (410)
T 1vyh_C 181 GF---ECIRTMH--GHDHNVSSVSIMPNGDHIVSASRD---------KTIKMWEVQTGYC 226 (410)
T ss_dssp SS---CEEECCC--CCSSCEEEEEECSSSSEEEEEETT---------SEEEEEETTTCCE
T ss_pred CC---ceeEEEc--CCCCCEEEEEEeCCCCEEEEEeCC---------CeEEEEECCCCcE
Confidence 22 1111110 011111222232 55667777642 3588999987653
No 260
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=37.30 E-value=2.8e+02 Score=26.82 Aligned_cols=111 Identities=8% Similarity=-0.071 Sum_probs=57.5
Q ss_pred ECCEEEEECccCCCCCCcCcEEEEEccCCc--ceEEEee--ec---CCCCCC--ccccEEEEE--CCcEEEEEecCCCCC
Q 004198 108 VGTMVVFQGGIGPAGHSTDDLYVLDLTNDK--FKWHRVV--VQ---GQGPGP--RYGHVMDLV--SQRYLVSVSGNDGKR 176 (769)
Q Consensus 108 ~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~--~~W~~~~--~~---g~~p~~--R~~hs~~~~--~~~~l~v~GG~~~~~ 176 (769)
..+.+|+|=| +.+|+||..+.+ .+...-+ .. ..+|.. ...--+++. .++++|+|-|
T Consensus 69 ~~g~~~fFkg--------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG----- 135 (225)
T 3oyo_A 69 EASEAYVFSG--------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG----- 135 (225)
T ss_dssp STTEEEEEET--------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET-----
T ss_pred CCCeEEEEcC--------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC-----
Confidence 4679999877 358999874321 1111101 00 122321 002222222 4569999987
Q ss_pred ccCceeEEeCCCCCceE--EEcCC-CCC---CCCcccccEEEEe-cCCEEEEEcccCCCCCcccceEEEecC
Q 004198 177 VLSDAWALDTAQKPYVW--QRLNP-EGD---RPSARMYATASAR-SDGMFLLCGGRDASGAPLADAYGLLMH 241 (769)
Q Consensus 177 ~~~dv~~~d~~~~~~~W--~~v~~-~~~---~P~~r~~hsa~~~-~~g~l~v~GG~~~~~~~l~d~~~ld~~ 241 (769)
+..|+||..+..... ..+.. -.. .+.+..-.+|... .++++|+|-| +..|+|+..
T Consensus 136 --~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG--------~~ywr~d~~ 197 (225)
T 3oyo_A 136 --NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG--------QNYVRIDFT 197 (225)
T ss_dssp --TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET--------TEEEEEECC
T ss_pred --CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeCC
Confidence 468999976652221 11111 000 0012333555554 6889999976 357788876
No 261
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=36.99 E-value=3.5e+02 Score=27.46 Aligned_cols=20 Identities=10% Similarity=-0.009 Sum_probs=14.2
Q ss_pred eEEEEeCCEEEEEcCcCCCc
Q 004198 331 HASASIGVRIYIYGGLKGDI 350 (769)
Q Consensus 331 hs~~~~~~~iyv~GG~~~~~ 350 (769)
..+...+++++++|+.++..
T Consensus 388 ~~~~s~dg~~la~~~~d~~v 407 (416)
T 2pm9_A 388 AAHWAFGGKLVQITPDGKGV 407 (416)
T ss_dssp CCEEETTTEEECBCTTSSCB
T ss_pred ceEEeeCCeEEEEeCCCCeE
Confidence 44555678999999977653
No 262
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=36.50 E-value=3.4e+02 Score=27.13 Aligned_cols=96 Identities=10% Similarity=0.025 Sum_probs=48.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
+.+..||+.+.+-..+.... ....-.+++.. ++.+++.|+. ...+.+||+.+....-..+. .....
T Consensus 149 g~i~~wd~~~~~~~~~~~~~---~~~~i~~~~~~pdg~~lasg~~------dg~i~iwd~~~~~~~~~~~~----~~h~~ 215 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAK---SDVEYSSGVLHKDSLLLALYSP------DGILDVYNLSSPDQASSRFP----VDEEA 215 (343)
T ss_dssp CCEEEEESSSSCEEEEECCC---SSCCCCEEEECTTSCEEEEECT------TSCEEEEESSCTTSCCEECC----CCTTS
T ss_pred CcEEEEECCCCcEEEEEecC---CCCceEEEEECCCCCEEEEEcC------CCEEEEEECCCCCCCccEEe----ccCCC
Confidence 57889999988765443221 11111222222 4566676664 24589999988431111221 10111
Q ss_pred cccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
.-.++....++.+++.|+ ++ .+.++|+.+.
T Consensus 216 ~v~~l~fs~~g~~l~s~~-~~-----~v~iwd~~~~ 245 (343)
T 3lrv_A 216 KIKEVKFADNGYWMVVEC-DQ-----TVVCFDLRKD 245 (343)
T ss_dssp CEEEEEECTTSSEEEEEE-SS-----BEEEEETTSS
T ss_pred CEEEEEEeCCCCEEEEEe-CC-----eEEEEEcCCC
Confidence 112333334445666666 32 5888888765
No 263
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=35.99 E-value=3.2e+02 Score=26.72 Aligned_cols=25 Identities=16% Similarity=0.108 Sum_probs=15.3
Q ss_pred EECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 160 LVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 160 ~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
...++.+++.|+.++ .+..++....
T Consensus 94 ~s~dg~~l~s~~~d~-----~i~~~~~~~~ 118 (340)
T 4aow_A 94 ISSDGQFALSGSWDG-----TLRLWDLTTG 118 (340)
T ss_dssp ECTTSSEEEEEETTS-----EEEEEETTTT
T ss_pred ECCCCCEEEEEcccc-----cceEEeeccc
Confidence 334456677777654 3666777665
No 264
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=35.47 E-value=2.9e+02 Score=26.13 Aligned_cols=149 Identities=9% Similarity=-0.030 Sum_probs=71.8
Q ss_pred CCEEEE-ECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCC
Q 004198 109 GTMVVF-QGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTA 187 (769)
Q Consensus 109 ~~~Iyv-~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~ 187 (769)
++.+|+ .... ...+++||..+ ........ .....-+.+++..++.+|+... .+.+++||+.
T Consensus 34 ~g~l~v~~~~~------~~~i~~~~~~~--~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~------~~~i~~~d~~ 95 (270)
T 1rwi_B 34 AGNVYVTSEGM------YGRVVKLATGS--TGTTVLPF----NGLYQPQGLAVDGAGTVYVTDF------NNRVVTLAAG 95 (270)
T ss_dssp TCCEEEEECSS------SCEEEEECC-------EECCC----CSCCSCCCEEECTTCCEEEEET------TTEEEEECTT
T ss_pred CCCEEEEccCC------CCcEEEecCCC--cccceEee----CCcCCcceeEECCCCCEEEEcC------CCEEEEEeCC
Confidence 357888 4332 24588888766 22333211 1111223454554556777654 1368899987
Q ss_pred CCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe
Q 004198 188 QKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV 267 (769)
Q Consensus 188 ~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~ 267 (769)
.. ....+... ....-+..+...++.+|+.... ...++.++..+. ........+ ...-..+++-
T Consensus 96 ~~--~~~~~~~~----~~~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~-~~~~~~~~~----~~~p~~i~~~ 158 (270)
T 1rwi_B 96 SN--NQTVLPFD----GLNYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSK-TQTVLPFTG----LNDPDGVAVD 158 (270)
T ss_dssp CS--CCEECCCC----SCSSEEEEEECTTCCEEEEEGG------GTEEEEECTTCC-SCEECCCCS----CCSCCCEEEC
T ss_pred Cc--eEeeeecC----CcCCCcceEECCCCCEEEEECC------CCEEEEEECCCc-eeEeecccc----CCCceeEEEe
Confidence 76 22222211 1111234444467788886432 234666754422 112111111 1122344443
Q ss_pred -CCEEEEEecccCCCCcccCCCcEEEEECCCCcEE
Q 004198 268 -GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWL 301 (769)
Q Consensus 268 -~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~ 301 (769)
++++|+.... ...+.+||+.+..-.
T Consensus 159 ~~g~l~v~~~~---------~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 159 NSGNVYVTDTD---------NNRVVKLEAESNNQV 184 (270)
T ss_dssp TTCCEEEEEGG---------GTEEEEECTTTCCEE
T ss_pred CCCCEEEEECC---------CCEEEEEecCCCceE
Confidence 5678887542 235899998876543
No 265
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=35.05 E-value=3.4e+02 Score=26.72 Aligned_cols=24 Identities=13% Similarity=0.177 Sum_probs=16.9
Q ss_pred CCEEEEEecccCCCCcccCCCcEEEEECCCCcE
Q 004198 268 GARLHVTGGALRGGRAIEGEAAVAVLDTAAGVW 300 (769)
Q Consensus 268 ~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W 300 (769)
++.+++.|+. ...+.+||+.+.+-
T Consensus 179 ~~~~l~~~~~---------d~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 179 EERVVCAGYD---------NGDIKLFDLRNMAL 202 (357)
T ss_dssp CCCEEEEEET---------TSEEEEEETTTTEE
T ss_pred CCCEEEEEcc---------CCeEEEEECccCce
Confidence 6677777763 23589999988764
No 266
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=34.92 E-value=3.5e+02 Score=26.91 Aligned_cols=240 Identities=11% Similarity=0.091 Sum_probs=0.0
Q ss_pred EEEEcCCCCCCCCCCCCCCCccccccCCcEEEEECCCCcEEEecCCCCC-CcccccceEEEECCEEEEECccCCCCCCcC
Q 004198 48 LILFGGATAIEGGATSSAPGIRLAGVTNSVHLYDVLTRKWTRIRPAGEP-PSPRAAHAAAAVGTMVVFQGGIGPAGHSTD 126 (769)
Q Consensus 48 lyl~GG~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~~~~W~~l~~~g~~-P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~ 126 (769)
+++.||.+ +.+..||+.++.+..+...... ........+..-++.+++.|+. ..
T Consensus 26 ~las~~~D-------------------~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~------D~ 80 (330)
T 2hes_X 26 ILATGSTD-------------------RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF------DS 80 (330)
T ss_dssp EEEEEESS-------------------SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET------TS
T ss_pred EEEEEcCC-------------------CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC------CC
Q ss_pred cEEEEEccCCc---ceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCC
Q 004198 127 DLYVLDLTNDK---FKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRP 203 (769)
Q Consensus 127 dl~~~d~~t~~---~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P 203 (769)
.+.++|..+.. ..+..+.. -......-.+++...++.+++.|+.++. +.++|+....-.+..+... ..
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~--~~~h~~~V~~v~~sp~g~~las~s~D~~-----v~iwd~~~~~~~~~~~~~~--~~ 151 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAI--IEGHENEVKGVAWSNDGYYLATCSRDKS-----VWIWETDESGEEYECISVL--QE 151 (330)
T ss_dssp CEEEEEC-------CCCEEEEE--EC----CEEEEEECTTSCEEEEEETTSC-----EEEEECCTTCCCCEEEEEE--CC
T ss_pred cEEEEEcccCcCccccceeEEE--EcCCCCcEEEEEECCCCCEEEEEeCCCE-----EEEEeccCCCCCeEEEEEe--cc
Q ss_pred CcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCC--EEEEEecccCCC
Q 004198 204 SARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGA--RLHVTGGALRGG 281 (769)
Q Consensus 204 ~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~--~i~V~GG~~~~~ 281 (769)
....-.+.....++.+++.|+.+.. +..++.... .|............-.++++..+ ..+++-|..++.
T Consensus 152 h~~~v~~v~~~p~~~~l~s~s~D~~------i~iW~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 152 HSQDVKHVIWHPSEALLASSSYDDT------VRIWKDYDD---DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSC------EEEEEEETT---EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred CCCceEEEEECCCCCEEEEEcCCCe------EEEEECCCC---CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe
Q ss_pred CcccCCCcEEEEECCCC------cEEeccCCcc-CCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccc
Q 004198 282 RAIEGEAAVAVLDTAAG------VWLDRNGLVT-SSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDD 354 (769)
Q Consensus 282 ~~~~~~~~v~~yd~~t~------~W~~~~~~~~-~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D 354 (769)
+.+||..+. .|........ . ...-.+++...+.+++.||.++...+-|
T Consensus 223 --------v~iw~~~~~~~~~~~~~~~~~~~~~~h-----------------~~~v~~v~~s~~~~l~s~~~dg~v~iw~ 277 (330)
T 2hes_X 223 --------VRVWKYMGDDEDDQQEWVCEAILPDVH-----------------KRQVYNVAWGFNGLIASVGADGVLAVYE 277 (330)
T ss_dssp --------EEEEEEEEECTTSCEEEEEEEECCSCC-----------------SSCEEEEEECTTSCEEEEETTSCEEEEE
T ss_pred --------EEEEEecCCCccccceeEEeeeccccc-----------------ccceEEEEEcCCCEEEEEeCCCEEEEEE
Q ss_pred e
Q 004198 355 F 355 (769)
Q Consensus 355 ~ 355 (769)
.
T Consensus 278 ~ 278 (330)
T 2hes_X 278 E 278 (330)
T ss_dssp E
T ss_pred c
No 267
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=33.60 E-value=49 Score=34.63 Aligned_cols=113 Identities=10% Similarity=0.027 Sum_probs=57.5
Q ss_pred CCcEEEEECCCCc--EEEecCCCCCCcccccceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCC
Q 004198 74 TNSVHLYDVLTRK--WTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPG 151 (769)
Q Consensus 74 ~~dv~~yD~~~~~--W~~l~~~g~~P~~R~~hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~ 151 (769)
-+.++.+|..+++ |+.-.....++..-...+ ...++.+|++.... .-.+|.||..+...+|..-...-..-.
T Consensus 19 dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~-~~~~~~~~vv~p~~-----dG~l~a~~~~~G~~~~~~~~~~lv~~S 92 (339)
T 2be1_A 19 EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPS-RLETYETLIIEPFG-----DGNIYYFNAHQGLQKLPLSIRQLVSTS 92 (339)
T ss_dssp TSCEEEEETTTTEEEEEECGGGSCCSEECCCSC-TTTSSEEEEECCST-----TTEEEEEETTTEEEEEEEEHHHHHTTC
T ss_pred CCeEEEEECCCCcEEEEecCCccCCcEEecCCc-cccCCcEEEEEECC-----CCEEEEEECCCCcEEeeeccccceecc
Confidence 4679999998874 986443101222111111 11345777765322 234899999885555533311000111
Q ss_pred CccccEEEEE-------CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCC
Q 004198 152 PRYGHVMDLV-------SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNP 198 (769)
Q Consensus 152 ~R~~hs~~~~-------~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~ 198 (769)
|..+.+..++ .++. +++|+.+ ..++.+|..++...|+.-..
T Consensus 93 P~~~~~~pvv~~~~~~~~~g~-Vy~Gs~~-----g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 93 PLHLKTNIVVNDSGKIVEDEK-VYTGSMR-----TIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp SEEEECC----------CCEE-EEECEEE-----EEEEEEETTTCCEEEEESTT
T ss_pred ccccCCCceeecccccccCCE-EEEEecC-----CEEEEEECCCCcEEEEEecC
Confidence 1111111222 4434 4445433 45899999999888987543
No 268
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=31.83 E-value=3.1e+02 Score=26.67 Aligned_cols=122 Identities=7% Similarity=0.012 Sum_probs=58.8
Q ss_pred CCEEEEECccC-CCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECC-cEEEEEecCCCCCccCceeEEeC
Q 004198 109 GTMVVFQGGIG-PAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQ-RYLVSVSGNDGKRVLSDAWALDT 186 (769)
Q Consensus 109 ~~~Iyv~GG~~-~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~-~~l~v~GG~~~~~~~~dv~~~d~ 186 (769)
++.+|+..+.. ........+++||+.+ .++..+...........-+.++...+ +.+|+.... +.+++||+
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~ 99 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKT--GKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQT 99 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTT--CCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEET
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCC--CcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeC
Confidence 45788771100 0001124599999877 44655531000000111234434444 678886542 25899999
Q ss_pred CCCCceEEEc-CCCCCCCCcccccEEEEecCCEEEEEcccC---------CCCCcccceEEEecC
Q 004198 187 AQKPYVWQRL-NPEGDRPSARMYATASARSDGMFLLCGGRD---------ASGAPLADAYGLLMH 241 (769)
Q Consensus 187 ~~~~~~W~~v-~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~---------~~~~~l~d~~~ld~~ 241 (769)
. . +...+ ...........-+......++.+|+..... ........++.++..
T Consensus 100 ~-g--~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 100 D-G--TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp T-S--CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred C-C--CEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 8 5 45544 321111111122444555678888865322 111123567888765
No 269
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=30.93 E-value=3.6e+02 Score=25.82 Aligned_cols=158 Identities=14% Similarity=0.132 Sum_probs=77.6
Q ss_pred ceEEEECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeec---CCCCCCccccEEEEECCcEEEEEecCCCCCccC
Q 004198 103 HAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ---GQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLS 179 (769)
Q Consensus 103 hs~~~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~---g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~ 179 (769)
-|++.+.+.+|+|=|. .+|+++..... ........ ..+|. ....+.....++++|+|-| +
T Consensus 34 DAi~~~~g~~~fFkg~--------~~Wr~~~~~~~-~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG-------~ 96 (218)
T 1gen_A 34 DGIAQIRGEIFFFKDR--------FIWRTVTPRDK-PMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG-------N 96 (218)
T ss_dssp SEEEEETTEEEEEETT--------EEEEESSTTSC-CEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET-------T
T ss_pred eEEEeCCCcEEEEECC--------EEEEEeCCCCc-cCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC-------C
Confidence 3455567889988762 36777654311 11111111 12232 2222222223568899877 5
Q ss_pred ceeEEeCCCCCceE-EEcCCCCCCCCcccccEEEE-ecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeC-C----
Q 004198 180 DAWALDTAQKPYVW-QRLNPEGDRPSARMYATASA-RSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLA-P---- 252 (769)
Q Consensus 180 dv~~~d~~~~~~~W-~~v~~~~~~P~~r~~hsa~~-~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~-~---- 252 (769)
..|+|+-.+-.-.+ ..+...+-+.....-.+|.. ..++++|+|-| +..|+|+..+. +-... +
T Consensus 97 ~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--------~~ywr~d~~~~---~v~~gyPr~i~ 165 (218)
T 1gen_A 97 EYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKK---KMDPGFPKLIA 165 (218)
T ss_dssp EEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET--------TEEEEEETTTT---EECSSCCEEHH
T ss_pred EEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--------CEEEEEECccc---cccCCCCcchh
Confidence 68888842110000 12222222112223355554 36789999976 35788887543 11100 0
Q ss_pred -CCCCCcccceEEEEeC--CEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 253 -GVAPSPRYQHAAVFVG--ARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 253 -~~~P~~R~~hs~~~~~--~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
.-+..+.--.++.... +.+|+|=| +..|.||..+..
T Consensus 166 ~~w~g~p~~idaAf~~~~~g~~YfFkg-----------~~y~~~~~~~~~ 204 (218)
T 1gen_A 166 DAWNAIPDNLDAVVDLQGGGHSYFFKG-----------AYYLKLENQSLK 204 (218)
T ss_dssp HHSSSCCSSCSEEEECTTTCEEEEEET-----------TEEEEEETTEEE
T ss_pred hccCCCCCCCCEEEEEcCCCcEEEEEC-----------CEEEEEECCcee
Confidence 0011122223443433 89999976 347888886654
No 270
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=30.68 E-value=4.2e+02 Score=26.46 Aligned_cols=135 Identities=10% Similarity=0.047 Sum_probs=67.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEE-EECCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCC-CCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAA-AVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQ-GPGP 152 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~-~~~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~-~p~~ 152 (769)
+.+++||+.+++...+... . .-++++ .-++.+|+... +.+++||+.+ .+...+..... .+..
T Consensus 71 ~~i~~~d~~~~~~~~~~~~----~--~v~~i~~~~dg~l~v~~~--------~gl~~~d~~~--g~~~~~~~~~~~~~~~ 134 (326)
T 2ghs_A 71 RELHELHLASGRKTVHALP----F--MGSALAKISDSKQLIASD--------DGLFLRDTAT--GVLTLHAELESDLPGN 134 (326)
T ss_dssp TEEEEEETTTTEEEEEECS----S--CEEEEEEEETTEEEEEET--------TEEEEEETTT--CCEEEEECSSTTCTTE
T ss_pred CEEEEEECCCCcEEEEECC----C--cceEEEEeCCCeEEEEEC--------CCEEEEECCC--CcEEEEeeCCCCCCCC
Confidence 5799999998876655421 1 112222 23567777531 2499999988 44655532111 1111
Q ss_pred ccccEEEEECCcEEEEEec-CCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCC-EEEEEcccCCCCC
Q 004198 153 RYGHVMDLVSQRYLVSVSG-NDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDG-MFLLCGGRDASGA 230 (769)
Q Consensus 153 R~~hs~~~~~~~~l~v~GG-~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g-~l~v~GG~~~~~~ 230 (769)
+ -..+++..++.+|+... .........+|++| +. +...+... .......+...++ .+|+....
T Consensus 135 ~-~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g--~~~~~~~~-----~~~~~~i~~s~dg~~lyv~~~~----- 199 (326)
T 2ghs_A 135 R-SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KG--KVTKLFAD-----ISIPNSICFSPDGTTGYFVDTK----- 199 (326)
T ss_dssp E-EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TT--EEEEEEEE-----ESSEEEEEECTTSCEEEEEETT-----
T ss_pred C-CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CC--cEEEeeCC-----CcccCCeEEcCCCCEEEEEECC-----
Confidence 1 12333444456666432 11112345789998 34 44443211 0111233334565 56665321
Q ss_pred cccceEEEecC
Q 004198 231 PLADAYGLLMH 241 (769)
Q Consensus 231 ~l~d~~~ld~~ 241 (769)
.+.++.|+..
T Consensus 200 -~~~I~~~d~~ 209 (326)
T 2ghs_A 200 -VNRLMRVPLD 209 (326)
T ss_dssp -TCEEEEEEBC
T ss_pred -CCEEEEEEcc
Confidence 2467888764
No 271
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=30.66 E-value=5.4e+02 Score=27.72 Aligned_cols=65 Identities=11% Similarity=0.156 Sum_probs=35.8
Q ss_pred CCcEEEEEecCCCCCccCceeEEeCCCCCce--E-EEcCCCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEE
Q 004198 162 SQRYLVSVSGNDGKRVLSDAWALDTAQKPYV--W-QRLNPEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGL 238 (769)
Q Consensus 162 ~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~--W-~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~l 238 (769)
.++++|+|-| +..|+||..+.... . ..+.. .-+-.+..-.+|. ..++++|+|-| +..|+|
T Consensus 366 ~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~-~fpgip~~iDAA~-~~~g~~YFFkg--------~~ywr~ 428 (450)
T 1su3_A 366 NTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAH-DFPGIGHKVDAVF-MKDGFFYFFHG--------TRQYKF 428 (450)
T ss_dssp TTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHH-HSTTSCSCCSEEE-EETTEEEEEET--------TEEEEE
T ss_pred CCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhh-cCCCCCCCccEEE-EcCCeEEEEeC--------CEEEEE
Confidence 3568899877 46899997653100 0 11110 0001122223444 35889999876 457888
Q ss_pred ecCCC
Q 004198 239 LMHRN 243 (769)
Q Consensus 239 d~~~~ 243 (769)
+..+.
T Consensus 429 d~~~~ 433 (450)
T 1su3_A 429 DPKTK 433 (450)
T ss_dssp ETTTT
T ss_pred ECCcc
Confidence 87644
No 272
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=30.34 E-value=4.5e+02 Score=26.73 Aligned_cols=143 Identities=17% Similarity=0.180 Sum_probs=67.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCccccc-ceEEEE---CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAA-HAAAAV---GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~-hs~~~~---~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p 150 (769)
+.+..+|+.+++-...-.. ..+..... -....+ ++.+++.|+.+ ..+.+||+......-..+. + .
T Consensus 180 ~~i~~wd~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~sgs~D------~~v~~wd~~~~~~~~~~~~--~--h 248 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGS-EFPSGHTADVLSLSINSLNANMFISGSCD------TTVRLWDLRITSRAVRTYH--G--H 248 (380)
T ss_dssp SCEEEECTTTCCEEEEECC-CSSSSCCSCEEEEEECSSSCCEEEEEETT------SCEEEEETTTTCCCCEEEC--C--C
T ss_pred CcEEEEEcCCCcEEEEeec-ccCCCCccCeEEEEeecCCCCEEEEEECC------CeEEEEECCCCCcceEEEC--C--c
Confidence 4688889988775543211 01111111 111222 45677777642 3488999874211112221 1 0
Q ss_pred CCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEc-CCCCCC--CCcccccEEEEecCCEEEEEcccCC
Q 004198 151 GPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRL-NPEGDR--PSARMYATASARSDGMFLLCGGRDA 227 (769)
Q Consensus 151 ~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v-~~~~~~--P~~r~~hsa~~~~~g~l~v~GG~~~ 227 (769)
. ..-.+++...++.+++.|+.++ .+.++|+.+. +-... ...... .......+.....++.+++.|+.+
T Consensus 249 ~-~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d- 319 (380)
T 3iz6_a 249 E-GDINSVKFFPDGQRFGTGSDDG-----TCRLFDMRTG--HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN- 319 (380)
T ss_dssp S-SCCCEEEECTTSSEEEEECSSS-----CEEEEETTTT--EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-
T ss_pred C-CCeEEEEEecCCCeEEEEcCCC-----eEEEEECCCC--cEEEEecccccccccccCceEEEEECCCCCEEEEEECC-
Confidence 0 0111333444556777777665 3778888776 22221 111000 001112344445677777777653
Q ss_pred CCCcccceEEEecCC
Q 004198 228 SGAPLADAYGLLMHR 242 (769)
Q Consensus 228 ~~~~l~d~~~ld~~~ 242 (769)
..+..+|...
T Consensus 320 -----g~i~vwd~~~ 329 (380)
T 3iz6_a 320 -----GDCYVWDTLL 329 (380)
T ss_dssp -----SCEEEEETTT
T ss_pred -----CCEEEEECCC
Confidence 2456666553
No 273
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=30.04 E-value=3.9e+02 Score=25.89 Aligned_cols=153 Identities=13% Similarity=0.101 Sum_probs=75.9
Q ss_pred CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 110 TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 110 ~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
+.+|+.+.. ...+++||+.+ . ...+.. +. ..-+.++...++.+|+.... ...+++||+.+.
T Consensus 40 ~~l~~~~~~------~~~i~~~~~~~--~-~~~~~~----~~-~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g 100 (296)
T 3e5z_A 40 SAVIFSDVR------QNRTWAWSDDG--Q-LSPEMH----PS-HHQNGHCLNKQGHLIACSHG-----LRRLERQREPGG 100 (296)
T ss_dssp TEEEEEEGG------GTEEEEEETTS--C-EEEEES----SC-SSEEEEEECTTCCEEEEETT-----TTEEEEECSTTC
T ss_pred CEEEEEeCC------CCEEEEEECCC--C-eEEEEC----CC-CCcceeeECCCCcEEEEecC-----CCeEEEEcCCCC
Confidence 457777653 24599999988 3 444421 11 11234444445567665432 245899999777
Q ss_pred CceEEEcCCC-CCCCCcccccEEEEecCCEEEEE----cccCC-------CCCcccceEEEecCCCCceEEEeCCCCCCC
Q 004198 190 PYVWQRLNPE-GDRPSARMYATASARSDGMFLLC----GGRDA-------SGAPLADAYGLLMHRNGQWEWTLAPGVAPS 257 (769)
Q Consensus 190 ~~~W~~v~~~-~~~P~~r~~hsa~~~~~g~l~v~----GG~~~-------~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~ 257 (769)
+...+... ...+..+. ...+...+|.+|+. |.... .......+|.++.. +....... ..
T Consensus 101 --~~~~~~~~~~~~~~~~~-~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~~~~-~~--- 171 (296)
T 3e5z_A 101 --EWESIADSFEGKKLNSP-NDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTLSAPIR-DR--- 171 (296)
T ss_dssp --CEEEEECEETTEECCCC-CCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCEEEEEC-CC---
T ss_pred --cEEEEeeccCCCCCCCC-CCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC--CCEEEeec-CC---
Confidence 44444221 01111111 23444578888886 43210 01113468888765 23222211 11
Q ss_pred cccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECC-CCcE
Q 004198 258 PRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTA-AGVW 300 (769)
Q Consensus 258 ~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~-t~~W 300 (769)
..-.+.++- ++++++.... ...+++|++. +++.
T Consensus 172 -~~~~gi~~s~dg~~lv~~~~---------~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 172 -VKPNGLAFLPSGNLLVSDTG---------DNATHRYCLNARGET 206 (296)
T ss_dssp -SSEEEEEECTTSCEEEEETT---------TTEEEEEEECSSSCE
T ss_pred -CCCccEEECCCCCEEEEeCC---------CCeEEEEEECCCCcC
Confidence 111334443 4555544331 2458899886 4554
No 274
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=29.87 E-value=7.7e+02 Score=29.30 Aligned_cols=198 Identities=12% Similarity=0.048 Sum_probs=93.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEECC-EEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGT-MVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPR 153 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~~~-~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R 153 (769)
.++|.+|...++-.++.... ......+.+-++ .|.+.... .......++|++|..+ .+-.++.........|
T Consensus 33 ~~l~~~~~~gg~~~~lt~~~----~~v~~~~~SPDG~~la~~s~~-~~~~~~~~i~~~d~~~--g~~~~lt~~~~~~~~~ 105 (1045)
T 1k32_A 33 DDLWEHDLKSGSTRKIVSNL----GVINNARFFPDGRKIAIRVMR-GSSLNTADLYFYNGEN--GEIKRITYFSGKSTGR 105 (1045)
T ss_dssp TEEEEEETTTCCEEEEECSS----SEEEEEEECTTSSEEEEEEEE-STTCCEEEEEEEETTT--TEEEECCCCCEEEETT
T ss_pred CcEEEEECCCCcEEEeeeCC----CcccCeEECCCCCEEEEEEee-ccCCCCCeEEEEECCC--CCeEEcccCCCccccc
Confidence 36999999988887776421 111111222244 44444332 1111235799999987 3444442100000001
Q ss_pred -cc-cEEEEECCcEEEEEecCCCC-CccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccCCC--
Q 004198 154 -YG-HVMDLVSQRYLVSVSGNDGK-RVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRDAS-- 228 (769)
Q Consensus 154 -~~-hs~~~~~~~~l~v~GG~~~~-~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~-- 228 (769)
.. .......++.+++.+..+.. .....+|.+|+.+. .-..+... +. ....... | +++.|.....
T Consensus 106 ~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g--~~~~l~~~---~~----~~~~~sp-G-~l~~~~~~~~~~ 174 (1045)
T 1k32_A 106 RMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGI--NFVPLNLG---PA----THILFAD-G-RRVIGRNTFELP 174 (1045)
T ss_dssp EECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGT--EEEECCSC---SC----SEEEEET-T-EEEEEESCSCCT
T ss_pred ccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCC--CeEEecCC---Cc----ceeeeCC-C-EEEEeccCCCcc
Confidence 11 12323333345554543322 23457999998877 55555432 11 1222334 6 5555532211
Q ss_pred ------CCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 229 ------GAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 229 ------~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
+....++|.+... +. ...+.+ ....-...+..++.+++.+...+ ...+|.+++.+..-+.
T Consensus 175 ~~~~~~g~~~~~lw~~~~~--~~--~~~l~~---~~~~v~~~~~s~d~l~~~~~~dg-------~~~l~~~~~~g~~~~~ 240 (1045)
T 1k32_A 175 HWKGYRGGTRGKIWIEVNS--GA--FKKIVD---MSTHVSSPVIVGHRIYFITDIDG-------FGQIYSTDLDGKDLRK 240 (1045)
T ss_dssp TSTTCCSTTCCEEEEEEET--TE--EEEEEC---CSSCCEEEEEETTEEEEEECTTS-------SCEEEEEETTSCSCEE
T ss_pred ccccccCCCcCCEEEECCC--CC--eEECcC---CCCcccceEEeCCEEEEEEeccC-------ceEEEEEeCCCCcceE
Confidence 1123566765543 22 222221 11222344445677777665321 3458888887766555
Q ss_pred cc
Q 004198 303 RN 304 (769)
Q Consensus 303 ~~ 304 (769)
+.
T Consensus 241 l~ 242 (1045)
T 1k32_A 241 HT 242 (1045)
T ss_dssp CC
T ss_pred ec
Confidence 43
No 275
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=28.87 E-value=36 Score=32.16 Aligned_cols=134 Identities=18% Similarity=0.134 Sum_probs=78.0
Q ss_pred cccccCHHHHHHHHHH-HHHHHhcCCceeeecCCEEEEccCCCCHHHHHHHHHHhCCCCC--------------------
Q 004198 550 RRFFLDSYEVGELCYA-AEQIFMQEPTVLQLRAPVKVFGDLHGQFGDLMRLFDEYGFPST-------------------- 608 (769)
Q Consensus 550 ~~~~~~~~~~~~l~~~-~~~~~~~e~~~l~~~~~i~viGDiHG~~~~l~~~l~~~~~~~~-------------------- 608 (769)
...++++++|.+-+++ |.+|.+.-. ..+++++|=+-|-+.-..++.+.+..+..
T Consensus 10 ~~vlis~~~I~~~i~rlA~eI~e~~~-----~~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~ssy~~~~~~~g~~~ 84 (181)
T 3acd_A 10 GPVQISAEAIKKRVEELGGEIARDYQ-----GKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYGNAFKSSGEVE 84 (181)
T ss_dssp SSCCBCHHHHHHHHHHHHHHHHHHTT-----TCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC------------C
T ss_pred ccEEeCHHHHHHHHHHHHHHHHHHhC-----CCCcEEEEEecCcHHHHHHHHHhcCCCccccceEEEEecCCcCCCCceE
Confidence 4567899999886665 566655422 13466778888888777777776665522
Q ss_pred -----CCCCcceeEEEeccccCCCCChHHHHHHHHHhhhcCCCceEE----e-cCCcchhhhhhccCCH--HHHHHHhCC
Q 004198 609 -----AGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHL----I-RGNHEAADINALFGFR--LECIERMGE 676 (769)
Q Consensus 609 -----~~~~~~~~~vfLGD~vDrG~~s~e~l~ll~~lk~~~p~~v~l----l-rGNHE~~~~~~~~g~~--~e~~~~~~~ 676 (769)
..+....++|++=|++|-|.--..++..|... -|..+.+ . ||..|...---..||. ++..--||-
T Consensus 85 ~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~---~p~sv~~avLl~K~~~r~~pi~~DyvG~~ipd~fvvGyGl 161 (181)
T 3acd_A 85 LLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEAR---KPASVRVAALLSKPSRRQVEVPIHYLGFEIEDAYVYGYGL 161 (181)
T ss_dssp EEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTT---CCSEEEEEEEEECGGGCSSCCCCSEEEEECCSCCEEBTTB
T ss_pred eccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcC---CCCEEEEEEEEEcCccccCCCCCCEEEEECCCceEEECCc
Confidence 01122347889999999887655555555543 4544322 2 5655554322233443 121222222
Q ss_pred CCchhhhHHHhHhhccccceEEE
Q 004198 677 NDGIWAWTRFNQLFNCLPLAALI 699 (769)
Q Consensus 677 ~~~~~~~~~~~~~f~~lP~~~~i 699 (769)
.+++.++.||..+.+
T Consensus 162 --------Dy~~~~Rnlp~i~~l 176 (181)
T 3acd_A 162 --------DRAQFDRNLPFITSI 176 (181)
T ss_dssp --------CBTTBCTTCSSBEEC
T ss_pred --------CccccccCCCeeEEe
Confidence 256778888876655
No 276
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=28.82 E-value=3e+02 Score=26.48 Aligned_cols=64 Identities=14% Similarity=0.196 Sum_probs=34.8
Q ss_pred CcEEEEEecCCCCCccCceeEEeCCCC-Cc--eE-EEcCC-CCCCCCc---ccccEEEEe-cCCEEEEEcccCCCCCccc
Q 004198 163 QRYLVSVSGNDGKRVLSDAWALDTAQK-PY--VW-QRLNP-EGDRPSA---RMYATASAR-SDGMFLLCGGRDASGAPLA 233 (769)
Q Consensus 163 ~~~l~v~GG~~~~~~~~dv~~~d~~~~-~~--~W-~~v~~-~~~~P~~---r~~hsa~~~-~~g~l~v~GG~~~~~~~l~ 233 (769)
++.+|+|-| +.+|+|+..++ .. .+ ..+.. .+ .|.. ..-.+|... .++++|+|-| +
T Consensus 72 ~~~~yfFkG-------~~yw~~~~~~~~~~~~gyPk~i~~~~G-~p~~~~~~~IDAA~~~~~~gk~yfFkG--------~ 135 (219)
T 1hxn_A 72 EDKLYLIQD-------TKVYVFLTKGGYTLVNGYPKRLEKELG-SPPVISLEAVDAAFVCPGSSRLHIMAG--------R 135 (219)
T ss_dssp TTEEEEEET-------TEEEEEECSSSCEECTTCCEEHHHHHC-CCSSCCCSCCCEEECCTTCCEEEEEET--------T
T ss_pred CCcEEEecC-------CEEEEEeCCCCceecCCCCeehhhccC-CCCcccccccceeEEecCCCEEEEEeC--------C
Confidence 568999977 46899986532 00 00 11211 11 1221 113444433 5789999976 4
Q ss_pred ceEEEecCC
Q 004198 234 DAYGLLMHR 242 (769)
Q Consensus 234 d~~~ld~~~ 242 (769)
..|+||..+
T Consensus 136 ~ywr~d~~~ 144 (219)
T 1hxn_A 136 RLWWLDLKS 144 (219)
T ss_dssp EEEEEEGGG
T ss_pred EEEEEeCCC
Confidence 578888653
No 277
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=28.73 E-value=3e+02 Score=28.96 Aligned_cols=65 Identities=20% Similarity=0.177 Sum_probs=35.5
Q ss_pred cccEEEEECCcEEEEEecCCCCCc-cCceeEEeCCCCCceEEEcCCCCCC----CCcccccEEEEecCCEEEEEcc
Q 004198 154 YGHVMDLVSQRYLVSVSGNDGKRV-LSDAWALDTAQKPYVWQRLNPEGDR----PSARMYATASARSDGMFLLCGG 224 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~GG~~~~~~-~~dv~~~d~~~~~~~W~~v~~~~~~----P~~r~~hsa~~~~~g~l~v~GG 224 (769)
..|++++..++.+|.+|-+...+. ..+. .......++...... -.....|+++...++.+|.+|-
T Consensus 130 ~~h~~alt~~G~v~~wG~n~~GqLG~g~~------~~~~~p~~v~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~ 199 (406)
T 4d9s_A 130 DSHCLAVTMEGEVQSWGRNQNGQLGLGDT------EDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 199 (406)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSSSC------CCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred hhheEEEcCCCcEEEeCCCCCccCCCCCC------CCcccceEecccCCCcEEEEecCCCeEEEEeCCCCEEEeeC
Confidence 567888888889999997643221 1110 000011222111000 0123468888889999999984
No 278
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=27.61 E-value=6.2e+02 Score=27.42 Aligned_cols=126 Identities=13% Similarity=0.051 Sum_probs=63.2
Q ss_pred ECCEEEEECccC-CCCCCcCcEEEEEccCCcc----eEEEeeecCCCCCCc-cccEEE------------E--ECCcEEE
Q 004198 108 VGTMVVFQGGIG-PAGHSTDDLYVLDLTNDKF----KWHRVVVQGQGPGPR-YGHVMD------------L--VSQRYLV 167 (769)
Q Consensus 108 ~~~~Iyv~GG~~-~~~~~~~dl~~~d~~t~~~----~W~~~~~~g~~p~~R-~~hs~~------------~--~~~~~l~ 167 (769)
-+..+|+..... ..+...+.+-+.|+..+.. .-.+++ +|..- .-|.+. . .+.+++|
T Consensus 24 ~e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~~vi~~~~----~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~ 99 (462)
T 2ece_A 24 PEDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVE----LPYINDELHHFGWNACSSALCPNGKPNIERRFLI 99 (462)
T ss_dssp CCSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTTSEEEEEE----CSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEE
T ss_pred cceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcceEEEEEE----CCCCCCcccccchhhhhhhcccccCCCccCCEEE
Confidence 345777776542 3344567788888874212 223332 22211 111111 2 3455777
Q ss_pred EEecCCCCCccCceeEEeCCCCCceEEEcCCC--CCC--C-CcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCC
Q 004198 168 SVSGNDGKRVLSDAWALDTAQKPYVWQRLNPE--GDR--P-SARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHR 242 (769)
Q Consensus 168 v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~--~~~--P-~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~ 242 (769)
+-|..+ +.++++|+.+++.+=+.+... .+. + ....-|+.....+| +||..--+..+..-+.+..+|..+
T Consensus 100 v~~l~s-----~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 100 VPGLRS-----SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp EEBTTT-----CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred EccCCC-----CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 766643 679999998764432222111 000 0 01123666666888 666432222333457888998775
Q ss_pred C
Q 004198 243 N 243 (769)
Q Consensus 243 ~ 243 (769)
.
T Consensus 174 ~ 174 (462)
T 2ece_A 174 F 174 (462)
T ss_dssp C
T ss_pred C
Confidence 4
No 279
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=27.59 E-value=6.2e+02 Score=27.45 Aligned_cols=95 Identities=9% Similarity=-0.046 Sum_probs=49.0
Q ss_pred EEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCccc
Q 004198 128 LYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARM 207 (769)
Q Consensus 128 l~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~ 207 (769)
..+||+.+ .+..++.. .+. .+.+...++..+++++.+... ...+|++|+.+. ++..+... ...
T Consensus 134 ~~l~d~~~--g~~~~l~~---~~~----~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g--~~~~l~~~-----~~~ 196 (582)
T 3o4h_A 134 VALYALDG--GGLRELAR---LPG----FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSG--GLRVFDSG-----EGS 196 (582)
T ss_dssp EEEEEEET--TEEEEEEE---ESS----CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTC--CCEEECCS-----SCE
T ss_pred ceEEEccC--CcEEEeec---CCC----ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCC--CceEeecC-----CCc
Confidence 44778887 44555532 111 233232223444444433221 245999999887 56666432 112
Q ss_pred ccEEEEecCCEEEEEcccCCCCCcccceEEEecCCC
Q 004198 208 YATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN 243 (769)
Q Consensus 208 ~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~ 243 (769)
........||+.++.+..++ ...++.++..+.
T Consensus 197 ~~~~~~SpDG~~l~~~~~~~----~~~i~~~d~~~~ 228 (582)
T 3o4h_A 197 FSSASISPGMKVTAGLETAR----EARLVTVDPRDG 228 (582)
T ss_dssp EEEEEECTTSCEEEEEECSS----CEEEEEECTTTC
T ss_pred cccceECCCCCEEEEccCCC----eeEEEEEcCCCC
Confidence 23344457876665433221 246888887654
No 280
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=27.57 E-value=4e+02 Score=25.27 Aligned_cols=108 Identities=9% Similarity=0.112 Sum_probs=53.8
Q ss_pred CCEEEEECccCCCCCCcCcEEEEEccCCcceE-EEeeecCCCCCCcccc-EEEEE-CCcEEEEEecCCCCCccCceeEEe
Q 004198 109 GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKW-HRVVVQGQGPGPRYGH-VMDLV-SQRYLVSVSGNDGKRVLSDAWALD 185 (769)
Q Consensus 109 ~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W-~~~~~~g~~p~~R~~h-s~~~~-~~~~l~v~GG~~~~~~~~dv~~~d 185 (769)
++++|+|=| +.+|+|+-.+-..-+ ..+... ..|..-.+- ++... .++++|+|-| +..|+||
T Consensus 79 ~~~iyfFkG--------~~~w~~~~~~~~~gyPk~I~~~-GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d 142 (207)
T 1pex_A 79 HDLIFIFRG--------RKFWALNGYDILEGYPKKISEL-GLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYD 142 (207)
T ss_dssp TTEEEEEET--------TEEEEESTTCCCTTCSEESTTT-TCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEE
T ss_pred CCcEEEEcc--------CEEEEEeCCeeccCCceecccc-CCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEe
Confidence 479999877 347888643211011 112110 133211122 33233 3468899887 5689999
Q ss_pred CCCCCce--E-EEcC-CCCCCCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCC
Q 004198 186 TAQKPYV--W-QRLN-PEGDRPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRN 243 (769)
Q Consensus 186 ~~~~~~~--W-~~v~-~~~~~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~ 243 (769)
..++... + ..+. .-...| ..-.+|.. .++.+|+|-| +..|+|+..+.
T Consensus 143 ~~~~~~d~gyPr~i~~~~~Gip--~~iDaAf~-~~g~~YfFkg--------~~y~rf~~~~~ 193 (207)
T 1pex_A 143 DTNHIMDKDYPRLIEEDFPGIG--DKVDAVYE-KNGYIYFFNG--------PIQFEYSIWSN 193 (207)
T ss_dssp TTTTEECSSCCCBHHHHSTTSC--SCCSEEEE-ETTEEEEEET--------TEEEEEETTTT
T ss_pred CcCccccCCCCccHHHcCCCCC--CCccEEEE-cCCcEEEEEC--------CEEEEEeCCcc
Confidence 8764110 0 0000 000112 22344443 5889999976 35777877544
No 281
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=27.30 E-value=5.3e+02 Score=26.54 Aligned_cols=172 Identities=13% Similarity=0.079 Sum_probs=81.1
Q ss_pred cEEEEECCCCcEEEecCCCCCC-cc-c-----ccc--eEEEE----CCEEEEECccCCCCCCcCcEEEEEccCCcceEEE
Q 004198 76 SVHLYDVLTRKWTRIRPAGEPP-SP-R-----AAH--AAAAV----GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHR 142 (769)
Q Consensus 76 dv~~yD~~~~~W~~l~~~g~~P-~~-R-----~~h--s~~~~----~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~ 142 (769)
-+++.+-...+|+.+......| .. + ..+ +++.. .+.||+.+. ..-+|+.+-.. .+|+.
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-------~ggl~~S~DgG--~tW~~ 152 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-------PQGLFRSTDHG--ASWEP 152 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-------TTEEEEESSTT--SBCEE
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-------CCcEEEEcCCC--CCeEE
Confidence 4777666677899886421111 11 1 111 22222 457777542 12366665444 56998
Q ss_pred eeecCCCCC--------------CccccEEEEE--CCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCC---CCC
Q 004198 143 VVVQGQGPG--------------PRYGHVMDLV--SQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEG---DRP 203 (769)
Q Consensus 143 ~~~~g~~p~--------------~R~~hs~~~~--~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~---~~P 203 (769)
+......|. ...-+++.+. ....+|+.... ..+++.+-... +|+.+.... ..|
T Consensus 153 ~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~------ggl~~s~DgG~--tW~~~~~~~~~~~~p 224 (394)
T 3b7f_A 153 VAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS------GGVFESTDAGT--DWKPLNRGCAANFLP 224 (394)
T ss_dssp CHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET------BEEEEESSTTS--SCEECCTTCCCTTSS
T ss_pred CcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC------CCEEEECCCCC--CceECCCCccccccC
Confidence 742111121 1122344332 13466665432 23666655555 899885321 112
Q ss_pred Cc-----ccccEEEEecC--CEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCc--ccceEEEEe---CCEE
Q 004198 204 SA-----RMYATASARSD--GMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSP--RYQHAAVFV---GARL 271 (769)
Q Consensus 204 ~~-----r~~hsa~~~~~--g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~--R~~hs~~~~---~~~i 271 (769)
.+ ...++.....+ +.+|+..+ ..+++.+.... +|.......|.. .+....++. .+.|
T Consensus 225 ~~~~~~g~~~~~i~~~~~~~~~l~vg~~--------~gl~~s~D~G~---tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l 293 (394)
T 3b7f_A 225 DPNVEFGHDPHCVVQHPAAPDILYQQNH--------CGIYRMDRREG---VWKRIGDAMPREVGDIGFPIVVHQRDPRTV 293 (394)
T ss_dssp SSSSSSCBCEEEEEECSSSTTEEEEEET--------TEEEEEETTTT---EEECGGGGSCTTTCSCEEEEEECSSCTTCE
T ss_pred CCccccCcceeEEEECCCCCCEEEEEcC--------CeEEEeCCCCC---cceECCCCCCCCCccceEEEEECCCCCCEE
Confidence 11 22344444443 67777431 23677665544 666654322221 233344442 4667
Q ss_pred EEEe
Q 004198 272 HVTG 275 (769)
Q Consensus 272 ~V~G 275 (769)
|+..
T Consensus 294 ~~~t 297 (394)
T 3b7f_A 294 WVFP 297 (394)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7753
No 282
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=26.93 E-value=4.6e+02 Score=25.73 Aligned_cols=132 Identities=10% Similarity=0.028 Sum_probs=61.0
Q ss_pred CcEEEEECCCCcE-EEecCCCCCCcccccceE-EEEC----CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCC
Q 004198 75 NSVHLYDVLTRKW-TRIRPAGEPPSPRAAHAA-AAVG----TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQ 148 (769)
Q Consensus 75 ~dv~~yD~~~~~W-~~l~~~g~~P~~R~~hs~-~~~~----~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~ 148 (769)
+.+..||..+.+. ..+.....+.....-.++ ...+ +.+++.|+.+ ..+.+||+.+.... ..+. +
T Consensus 44 ~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d------g~i~v~d~~~~~~~-~~~~--~- 113 (366)
T 3k26_A 44 NRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR------GIIRIINPITMQCI-KHYV--G- 113 (366)
T ss_dssp TEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT------CEEEEECTTTCCEE-EEEE--S-
T ss_pred CEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC------CEEEEEEchhceEe-eeec--C-
Confidence 4688888886543 333221111111111122 2223 4566666642 35889998874311 1221 1
Q ss_pred CCCCccccEEEEEC-CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 149 GPGPRYGHVMDLVS-QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 149 ~p~~R~~hs~~~~~-~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
....-.++.... ++.+++.|+.++ .+.+||+.+. +-...-.. .......-.++....++..++.|+.+
T Consensus 114 --~~~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~--~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 114 --HGNAINELKFHPRDPNLLLSVSKDH-----ALRLWNIQTD--TLVAIFGG-VEGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp --CCSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTTT--EEEEEECS-TTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred --CCCcEEEEEECCCCCCEEEEEeCCC-----eEEEEEeecC--eEEEEecc-cccccCceeEEEECCCCCEEEEecCC
Confidence 111112232333 456777777654 4888898876 32222100 00111222333344667677777654
No 283
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=26.73 E-value=2.5e+02 Score=31.75 Aligned_cols=17 Identities=0% Similarity=-0.013 Sum_probs=12.8
Q ss_pred CcEEEEECCCCcEEecc
Q 004198 288 AAVAVLDTAAGVWLDRN 304 (769)
Q Consensus 288 ~~v~~yd~~t~~W~~~~ 304 (769)
..++.+|..+++.+.+.
T Consensus 337 ~~l~~~~~~~~~~~~lt 353 (719)
T 1z68_A 337 KHIHYIKDTVENAIQIT 353 (719)
T ss_dssp EEEEEESSCSTTCEECS
T ss_pred eEEEEEECCCCceEecc
Confidence 46999999888766554
No 284
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=25.90 E-value=84 Score=35.00 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=21.0
Q ss_pred EEEEccCC---CCHHHHHHHHHHhCCCCCCCCCcceeEEEeccccC
Q 004198 583 VKVFGDLH---GQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVD 625 (769)
Q Consensus 583 i~viGDiH---G~~~~l~~~l~~~~~~~~~~~~~~~~~vfLGD~vD 625 (769)
+.++||.| |.+..+..+.+ ..+ + -+|+|||+|.
T Consensus 119 fa~~sc~~~~~g~~~~~~~ia~---~~~-D------~vlhlGD~iY 154 (527)
T 2yeq_A 119 FAFASCQQYEHGYYTAYKHMAK---EKL-D------LVFHLGDYIY 154 (527)
T ss_dssp EEEECCCCGGGCCCHHHHHHTT---SCC-S------EEEECSCSSC
T ss_pred EEEEecCCCCCCccHHHHHHHh---cCC-C------EEEecCCccc
Confidence 78899986 44555544432 111 1 5788999994
No 285
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=25.47 E-value=5e+02 Score=25.65 Aligned_cols=239 Identities=9% Similarity=-0.057 Sum_probs=111.5
Q ss_pred CcEEEEECCCCcEEEecCCCCC---------------CcccccceEEEE--CCEEEEECccCCCCCCcCcEEEEEccCCc
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEP---------------PSPRAAHAAAAV--GTMVVFQGGIGPAGHSTDDLYVLDLTNDK 137 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~---------------P~~R~~hs~~~~--~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~ 137 (769)
+.+++||+.+.+++.+...... +....-++++.. ++.|||.... ..++++|+.+
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~-------~~i~~~d~~~-- 110 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY-------YHLSVVGSEG-- 110 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT-------TEEEEECTTC--
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC-------CCEEEEeCCC--
Confidence 5789999988877765421100 000122455555 4688886321 2388898876
Q ss_pred ceEEEeeecCCCCCCccccEEEEEC-CcEEEEEecCCC------------CCccCceeEEeCCCCCceEEEcCCCCCCCC
Q 004198 138 FKWHRVVVQGQGPGPRYGHVMDLVS-QRYLVSVSGNDG------------KRVLSDAWALDTAQKPYVWQRLNPEGDRPS 204 (769)
Q Consensus 138 ~~W~~~~~~g~~p~~R~~hs~~~~~-~~~l~v~GG~~~------------~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~ 204 (769)
.+.+.+...........-..+++.. ++.+|+.-.... ......+++||+.+. +...+....
T Consensus 111 g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--~~~~~~~~~---- 184 (322)
T 2fp8_A 111 GHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK--ETTLLLKEL---- 184 (322)
T ss_dssp EECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT--EEEEEEEEE----
T ss_pred CEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC--EEEEeccCC----
Confidence 3333332110101111223344444 567777532211 012356999999876 443332110
Q ss_pred cccccEEEEecCC-EEEEEcccCCCCCcccceEEEecCCC--CceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCC
Q 004198 205 ARMYATASARSDG-MFLLCGGRDASGAPLADAYGLLMHRN--GQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRG 280 (769)
Q Consensus 205 ~r~~hsa~~~~~g-~l~v~GG~~~~~~~l~d~~~ld~~~~--~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~ 280 (769)
..-...+...++ .+|+.-.. .+.++.|+.... +..+... .. +. -..+++- ++.+||.-.....
T Consensus 185 -~~p~gia~~~dg~~lyv~d~~------~~~I~~~~~~~~~~~~~~~~~--~~-~g---P~gi~~d~~G~l~va~~~~~~ 251 (322)
T 2fp8_A 185 -HVPGGAEVSADSSFVLVAEFL------SHQIVKYWLEGPKKGTAEVLV--KI-PN---PGNIKRNADGHFWVSSSEELD 251 (322)
T ss_dssp -SCCCEEEECTTSSEEEEEEGG------GTEEEEEESSSTTTTCEEEEE--EC-SS---EEEEEECTTSCEEEEEEEETT
T ss_pred -ccCcceEECCCCCEEEEEeCC------CCeEEEEECCCCcCCccceEE--eC-CC---CCCeEECCCCCEEEEecCccc
Confidence 111233444554 57775321 246778876532 2222211 11 11 2333333 5678887532110
Q ss_pred CC-cccCCCcEEEEECCCCcEEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCCEEEEEcCcCCCccccceEEec
Q 004198 281 GR-AIEGEAAVAVLDTAAGVWLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGVRIYIYGGLKGDILLDDFLVAE 359 (769)
Q Consensus 281 ~~-~~~~~~~v~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~~iyv~GG~~~~~~~~D~~~ld 359 (769)
.. .......+.+||++...-..+...... + ...-.+++..+++|||..-.+ +-+.+++
T Consensus 252 ~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~---------------~-~~~~~~~~~~~g~L~v~~~~~-----~~i~~~~ 310 (322)
T 2fp8_A 252 GNMHGRVDPKGIKFDEFGNILEVIPLPPPF---------------A-GEHFEQIQEHDGLLYIGTLFH-----GSVGILV 310 (322)
T ss_dssp SSTTSCEEEEEEEECTTSCEEEEEECCTTT---------------T-TSCCCEEEEETTEEEEECSSC-----SEEEEEE
T ss_pred ccccCCCccEEEEECCCCCEEEEEECCCCC---------------c-cccceEEEEeCCEEEEeecCC-----CceEEEe
Confidence 00 000124589999875544444322110 0 112233445678999875433 3355666
Q ss_pred CCC
Q 004198 360 NSP 362 (769)
Q Consensus 360 ~~~ 362 (769)
+..
T Consensus 311 ~~~ 313 (322)
T 2fp8_A 311 YDK 313 (322)
T ss_dssp C--
T ss_pred ccc
Confidence 554
No 286
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=24.09 E-value=5.2e+02 Score=25.34 Aligned_cols=108 Identities=11% Similarity=0.043 Sum_probs=53.1
Q ss_pred cEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEec-CCEEEEEcccCCCCCcccceEEEecCC
Q 004198 164 RYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARS-DGMFLLCGGRDASGAPLADAYGLLMHR 242 (769)
Q Consensus 164 ~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~-~g~l~v~GG~~~~~~~l~d~~~ld~~~ 242 (769)
+.+++.|+.++ .+.+||+.+...... +... ...-.+..... ++.+++.|+.++ .+..++...
T Consensus 85 ~~~l~~~~~dg-----~i~v~d~~~~~~~~~-~~~~-----~~~i~~~~~~~~~~~~l~s~~~dg------~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSRG-----IIRIINPITMQCIKH-YVGH-----GNAINELKFHPRDPNLLLSVSKDH------ALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETTC-----EEEEECTTTCCEEEE-EESC-----CSCEEEEEECSSCTTEEEEEETTS------CEEEEETTT
T ss_pred CCEEEEecCCC-----EEEEEEchhceEeee-ecCC-----CCcEEEEEECCCCCCEEEEEeCCC------eEEEEEeec
Confidence 46777777654 588888877632221 2111 11112333334 667777777543 356666654
Q ss_pred CCceEEEeCCCCCCCcccceEEEEe-CCEEEEEecccCCCCcccCCCcEEEEECCCCc
Q 004198 243 NGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTGGALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 243 ~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
. ...... .........-.++++. ++..++.|+.. ..+.+||+.+.+
T Consensus 148 ~-~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------g~i~i~d~~~~~ 194 (366)
T 3k26_A 148 D-TLVAIF-GGVEGHRDEVLSADYDLLGEKIMSCGMD---------HSLKLWRINSKR 194 (366)
T ss_dssp T-EEEEEE-CSTTSCSSCEEEEEECTTSSEEEEEETT---------SCEEEEESCSHH
T ss_pred C-eEEEEe-cccccccCceeEEEECCCCCEEEEecCC---------CCEEEEECCCCc
Confidence 3 111111 1101111111233332 46667777642 348899987653
No 287
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=23.07 E-value=7.1e+02 Score=26.58 Aligned_cols=55 Identities=11% Similarity=0.149 Sum_probs=28.8
Q ss_pred EECCcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcccccEEEEecCCEEEEEcccC
Q 004198 160 LVSQRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSARMYATASARSDGMFLLCGGRD 226 (769)
Q Consensus 160 ~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r~~hsa~~~~~g~l~v~GG~~ 226 (769)
+..+..+++.|+.++ .+.+||.... .-..+... ...-.++....++.+++.|+.+
T Consensus 434 ~s~d~~~l~~~~~d~-----~v~~w~~~~~--~~~~~~~~-----~~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 434 FSPDDQTIASASDDK-----TVKLWNRNGQ--LLQTLTGH-----SSSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp ECTTSSEEEEEETTS-----EEEEEETTSC--EEEEEECC-----SSCEEEEEECTTSCEEEEEETT
T ss_pred ECCCCCEEEEEcCCC-----EEEEEECCCC--EEEEEcCC-----CCCEEEEEEcCCCCEEEEEeCC
Confidence 334445666666553 3667776554 33333221 1122344455788888877653
No 288
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=21.88 E-value=4.9e+02 Score=26.97 Aligned_cols=160 Identities=11% Similarity=0.017 Sum_probs=0.0
Q ss_pred cccEEEEECCcEEEEEe----cCCCCCccCceeEEeCCCCCceEEEcCCCCCCCCcc-cccEEEEecCCEEEEEc----c
Q 004198 154 YGHVMDLVSQRYLVSVS----GNDGKRVLSDAWALDTAQKPYVWQRLNPEGDRPSAR-MYATASARSDGMFLLCG----G 224 (769)
Q Consensus 154 ~~hs~~~~~~~~l~v~G----G~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~P~~r-~~hsa~~~~~g~l~v~G----G 224 (769)
..|++++..++.+|.+| |.-+.....+...-...........+... ... ..|+++...++.+|.+| |
T Consensus 168 ~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia----~G~g~~~t~~l~~~G~v~~wG~n~~G 243 (389)
T 3kci_A 168 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIA----CGSGDAQTLCLTDDDTVWSWGDGDYG 243 (389)
T ss_dssp SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEE----ECCSSCEEEEEETTTEEEEEECCGGG
T ss_pred cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEE----EcCCCcEEEEEccCCEEEEEeCCCCC
Q ss_pred cCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-CCEEEEEe----cccCCCCcccCCCcEEEEECCCCc
Q 004198 225 RDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV-GARLHVTG----GALRGGRAIEGEAAVAVLDTAAGV 299 (769)
Q Consensus 225 ~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~-~~~i~V~G----G~~~~~~~~~~~~~v~~yd~~t~~ 299 (769)
.-+.+.......-.....-.......+ ..-..|++++. ++.+|..| |..+.+..........+-.+....
T Consensus 244 qLG~g~~~~~~~p~~v~~~~~~~v~~v-----~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~ 318 (389)
T 3kci_A 244 KLGRGGSDGCKVPMKIDSLTGLGVVKV-----ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 318 (389)
T ss_dssp TTSSSSCCCEEEEEECGGGTTSCEEEE-----EEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCC
T ss_pred CCCCCCCCCccccEEecccCCCcEEEE-----eCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCC
Q ss_pred EEeccCCccCCCCCCCCCCCCCccCcccccceEEEEeCC-EEEEEc
Q 004198 300 WLDRNGLVTSSRTSKGHGEHDPSLELMRRCRHASASIGV-RIYIYG 344 (769)
Q Consensus 300 W~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~hs~~~~~~-~iyv~G 344 (769)
...+..-.. |+++...+ ++|..|
T Consensus 319 v~~ia~G~~----------------------h~~al~~~G~v~~wG 342 (389)
T 3kci_A 319 VIAIATGSL----------------------HCVCCTEDGEVYTWG 342 (389)
T ss_dssp EEEEEECSS----------------------EEEEEETTCCEEEEE
T ss_pred EEEEEeccC----------------------eEEEECCCCCEEEee
No 289
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=21.52 E-value=6.1e+02 Score=25.20 Aligned_cols=146 Identities=12% Similarity=0.082 Sum_probs=73.7
Q ss_pred CEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCCC
Q 004198 110 TMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQK 189 (769)
Q Consensus 110 ~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~~ 189 (769)
+.+|+.+.. ...+++||+.+. +...+.. +. .-++++...++.+++... ..+++||+.+.
T Consensus 61 ~~l~~~d~~------~~~i~~~d~~~~--~~~~~~~----~~--~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g 119 (326)
T 2ghs_A 61 GTAWWFNIL------ERELHELHLASG--RKTVHAL----PF--MGSALAKISDSKQLIASD-------DGLFLRDTATG 119 (326)
T ss_dssp TEEEEEEGG------GTEEEEEETTTT--EEEEEEC----SS--CEEEEEEEETTEEEEEET-------TEEEEEETTTC
T ss_pred CEEEEEECC------CCEEEEEECCCC--cEEEEEC----CC--cceEEEEeCCCeEEEEEC-------CCEEEEECCCC
Confidence 577777643 246999999873 3444421 21 122333444556766541 34999999887
Q ss_pred CceEEEcCCCCC-CCCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEe-
Q 004198 190 PYVWQRLNPEGD-RPSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFV- 267 (769)
Q Consensus 190 ~~~W~~v~~~~~-~P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~- 267 (769)
+...+..... .+..+ ........+|.+|+.............+|.++ . ++...... . .....+.++.
T Consensus 120 --~~~~~~~~~~~~~~~~-~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~--g~~~~~~~-~----~~~~~~i~~s~ 188 (326)
T 2ghs_A 120 --VLTLHAELESDLPGNR-SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K--GKVTKLFA-D----ISIPNSICFSP 188 (326)
T ss_dssp --CEEEEECSSTTCTTEE-EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T--TEEEEEEE-E----ESSEEEEEECT
T ss_pred --cEEEEeeCCCCCCCCC-CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C--CcEEEeeC-C----CcccCCeEEcC
Confidence 5555533211 11122 23344456788877432111112346788888 2 33332211 0 0112233443
Q ss_pred CC-EEEEEecccCCCCcccCCCcEEEEECC
Q 004198 268 GA-RLHVTGGALRGGRAIEGEAAVAVLDTA 296 (769)
Q Consensus 268 ~~-~i~V~GG~~~~~~~~~~~~~v~~yd~~ 296 (769)
++ .+|+.... ...+++||..
T Consensus 189 dg~~lyv~~~~---------~~~I~~~d~~ 209 (326)
T 2ghs_A 189 DGTTGYFVDTK---------VNRLMRVPLD 209 (326)
T ss_dssp TSCEEEEEETT---------TCEEEEEEBC
T ss_pred CCCEEEEEECC---------CCEEEEEEcc
Confidence 33 57776431 2468999975
No 290
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=21.26 E-value=7.7e+02 Score=26.32 Aligned_cols=142 Identities=14% Similarity=0.120 Sum_probs=75.1
Q ss_pred EEEEEccCCcceEEEeeecCCCCCCccccEEEEECCcEEEEEecCCCCCccCceeEEeCCC---CC--ceEEEcCCCCCC
Q 004198 128 LYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQRYLVSVSGNDGKRVLSDAWALDTAQ---KP--YVWQRLNPEGDR 202 (769)
Q Consensus 128 l~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~~~l~v~GG~~~~~~~~dv~~~d~~~---~~--~~W~~v~~~~~~ 202 (769)
-|.+-..-.+..|+.... +..|..-.-|+.+.+++ .-|.+|-.++.-.-..+=.+-... .+ +.=..+...
T Consensus 260 ~W~~~T~F~~spW~~t~L-~~i~~vTe~HSFa~i~~-~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~se--- 334 (670)
T 3ju4_A 260 NWHMGTSFHKSPWRKTDL-GLIPSVTEVHSFATIDN-NGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSE--- 334 (670)
T ss_dssp EEEEEECSTTSCCEEEEC-CSCTTCSEEEEEEECSS-SCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGG---
T ss_pred eeeeeeeeccCCceeccc-ccccceeeeeeeeEecC-CceEEEeccCCCCcceeeEEEecccccCCcceeeeechhh---
Confidence 566654433345766543 55677778889888877 445777766654434433322211 11 111222221
Q ss_pred CCcccccEEEEecCCEEEEEcccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecc
Q 004198 203 PSARMYATASARSDGMFLLCGGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGA 277 (769)
Q Consensus 203 P~~r~~hsa~~~~~g~l~v~GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~ 277 (769)
-.+-..--++-+.+|.||+.---......-..+.+-+. ....|.-...+... -....-.+.+++.||+||-.
T Consensus 335 y~~~AsEPCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d-~Gq~w~slrfp~nv--HhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 335 YEPDASEPCIKYYDGVLYLITRGTRGDRLGSSLHRSRD-IGQTWESLRFPHNV--HHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp GCTTEEEEEEEEETTEEEEEEEESCTTSCCCEEEEESS-TTSSCEEEECTTCC--CSSCCCEEEETTEEEEEEEC
T ss_pred hccccccchhhhhCCEEEEEecCcCCCCCcceeeeecc-cCCchhheeccccc--cccCCCcceeCCEEEEEecc
Confidence 11222233455789999987532222222233444443 34577777776332 22223456789999999954
No 291
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=21.23 E-value=1.4e+02 Score=31.82 Aligned_cols=69 Identities=10% Similarity=0.057 Sum_probs=40.7
Q ss_pred CCEEEEEC---ccCCCCCCcCcEEEEEccCCcceEEEeeecCCCCCCccccEEEEECC-c-EEEEEecCCCCCccCceeE
Q 004198 109 GTMVVFQG---GIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVSQ-R-YLVSVSGNDGKRVLSDAWA 183 (769)
Q Consensus 109 ~~~Iyv~G---G~~~~~~~~~dl~~~d~~t~~~~W~~~~~~g~~p~~R~~hs~~~~~~-~-~l~v~GG~~~~~~~~dv~~ 183 (769)
++.+|+.- +.+..+...+.++++|+.+.+ .-.+++. + ..-+++.+..+ + .+|+.-+ ..++|.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k-v~~~i~v-g-----~~~~~lavs~D~~~~ly~tn~-----~~~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE-RLAKFEM-G-----HEIDSINVSQDEKPLLYALST-----GDKTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCC-EEEEEEE-E-----EEECEEEECSSSSCEEEEEET-----TTTEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCe-EEEEEEC-C-----CCcceEEECCCCCeEEEEEcC-----CCCeEEE
Confidence 56999963 333334446889999999942 2233322 2 22334444433 3 5666433 2467999
Q ss_pred EeCCCC
Q 004198 184 LDTAQK 189 (769)
Q Consensus 184 ~d~~~~ 189 (769)
||..+.
T Consensus 359 iD~~t~ 364 (386)
T 3sjl_D 359 HDAESG 364 (386)
T ss_dssp EETTTC
T ss_pred EECCCC
Confidence 999887
No 292
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=21.11 E-value=5.8e+02 Score=24.80 Aligned_cols=60 Identities=12% Similarity=0.095 Sum_probs=30.7
Q ss_pred CcEEEEEccCCcce--EEEeeecCCCCCCccccEEEEECCcE-EEEEecCCCCCccCceeEEeC-CCCCceEEEcC
Q 004198 126 DDLYVLDLTNDKFK--WHRVVVQGQGPGPRYGHVMDLVSQRY-LVSVSGNDGKRVLSDAWALDT-AQKPYVWQRLN 197 (769)
Q Consensus 126 ~dl~~~d~~t~~~~--W~~~~~~g~~p~~R~~hs~~~~~~~~-l~v~GG~~~~~~~~dv~~~d~-~~~~~~W~~v~ 197 (769)
..+.+||+.+.... ...+. .....-.+++...++. +++.|+.++ .+.+||+ .+. +...+.
T Consensus 33 ~~v~iw~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~~~--~~~~~~ 96 (342)
T 1yfq_A 33 GSLTVYKFDIQAKNVDLLQSL-----RYKHPLLCCNFIDNTDLQIYVGTVQG-----EILKVDLIGSP--SFQALT 96 (342)
T ss_dssp SEEEEEEEETTTTEEEEEEEE-----ECSSCEEEEEEEESSSEEEEEEETTS-----CEEEECSSSSS--SEEECB
T ss_pred CeEEEEEeCCCCccccceeee-----ecCCceEEEEECCCCCcEEEEEcCCC-----eEEEEEeccCC--ceEecc
Confidence 45888888764311 12221 1111122333333345 667777554 5888998 776 444443
No 293
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=20.71 E-value=5.6e+02 Score=24.46 Aligned_cols=107 Identities=10% Similarity=0.063 Sum_probs=54.8
Q ss_pred CCEEEEECccCCCCCCcCcEEEEEccCCcceEE-EeeecCCCCCCc-cccEEEEE-CCcEEEEEecCCCCCccCceeEEe
Q 004198 109 GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWH-RVVVQGQGPGPR-YGHVMDLV-SQRYLVSVSGNDGKRVLSDAWALD 185 (769)
Q Consensus 109 ~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~-~~~~~g~~p~~R-~~hs~~~~-~~~~l~v~GG~~~~~~~~dv~~~d 185 (769)
++++|+|=| +..|+||-.+-..-+- .+..- ..|... .-.++..+ .++++|+|-| +..|+||
T Consensus 87 ~~k~yfFkG--------~~yW~y~~~~~~~gyPk~I~~~-g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d 150 (218)
T 1gen_A 87 EEKAVFFAG--------NEYWIYSASTLERGYPKPLTSL-GLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYN 150 (218)
T ss_dssp TTEEEEEET--------TEEEEEETTEECTTCSEEGGGG-TCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEE
T ss_pred CCEEEEEeC--------CEEEEEcCccccCCCCccHhhc-CCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEE
Confidence 468999876 4489998532000010 11110 122221 12233333 5668999877 4689999
Q ss_pred CCCCCceEE-----EcCCCCCCCCcccccEEEEec-CCEEEEEcccCCCCCcccceEEEecCC
Q 004198 186 TAQKPYVWQ-----RLNPEGDRPSARMYATASARS-DGMFLLCGGRDASGAPLADAYGLLMHR 242 (769)
Q Consensus 186 ~~~~~~~W~-----~v~~~~~~P~~r~~hsa~~~~-~g~l~v~GG~~~~~~~l~d~~~ld~~~ 242 (769)
..++ +-. .+.. .-+..+..-.+|.... ++.+|+|-| +..|+|+..+
T Consensus 151 ~~~~--~v~~gyPr~i~~-~w~g~p~~idaAf~~~~~g~~YfFkg--------~~y~~~~~~~ 202 (218)
T 1gen_A 151 EVKK--KMDPGFPKLIAD-AWNAIPDNLDAVVDLQGGGHSYFFKG--------AYYLKLENQS 202 (218)
T ss_dssp TTTT--EECSSCCEEHHH-HSSSCCSSCSEEEECTTTCEEEEEET--------TEEEEEETTE
T ss_pred Cccc--cccCCCCcchhh-ccCCCCCCCCEEEEEcCCCcEEEEEC--------CEEEEEECCc
Confidence 8765 211 1110 0001222335555544 589999866 3567777653
No 294
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=20.63 E-value=6.3e+02 Score=25.01 Aligned_cols=203 Identities=9% Similarity=-0.001 Sum_probs=99.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCcccccceEEEE-CCEEEEECccCCCCCCcCcEEEEEccCCcceEEEeeec---CCCC
Q 004198 75 NSVHLYDVLTRKWTRIRPAGEPPSPRAAHAAAAV-GTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQ---GQGP 150 (769)
Q Consensus 75 ~dv~~yD~~~~~W~~l~~~g~~P~~R~~hs~~~~-~~~Iyv~GG~~~~~~~~~dl~~~d~~t~~~~W~~~~~~---g~~p 150 (769)
+.++++|+.+++.......+.. ..-++++.. ++.+|+.... ...+++||+......-..+... +...
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~---~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~ 139 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLF---YLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPLLILGRSMQPGSDQ 139 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTC---SSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCSEEESBTTBCCCST
T ss_pred CcEEEEECCCCeEEeccCCCcc---CCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEEEEecccCCCCCCc
Confidence 5799999998876544322211 122334333 4568886542 3468999986521011222110 1111
Q ss_pred CCccc-cEEEEEC-CcEEEEEecCCCCCccCceeEEeCCCCCceEEEcCCCCCC----CCccc-ccEEEEecC-CEEEEE
Q 004198 151 GPRYG-HVMDLVS-QRYLVSVSGNDGKRVLSDAWALDTAQKPYVWQRLNPEGDR----PSARM-YATASARSD-GMFLLC 222 (769)
Q Consensus 151 ~~R~~-hs~~~~~-~~~l~v~GG~~~~~~~~dv~~~d~~~~~~~W~~v~~~~~~----P~~r~-~hsa~~~~~-g~l~v~ 222 (769)
..... ..+++.. ++.+|+..+.. .+.+.+||.... .-..+...+.. +.... -+..++..+ +.+|+.
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~--~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~ 213 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGK--FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVA 213 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSS----CCEEEEECTTSC--EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEE
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCC--EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEE
Confidence 11111 2343443 56888876521 246888986543 22222211111 11111 133444455 899997
Q ss_pred cccCCCCCcccceEEEecCCCCceEEEeCCCCCCCcccceEEEEeCCEEEEEecccCCCCcccCCCcEEEEECCCCcEEe
Q 004198 223 GGRDASGAPLADAYGLLMHRNGQWEWTLAPGVAPSPRYQHAAVFVGARLHVTGGALRGGRAIEGEAAVAVLDTAAGVWLD 302 (769)
Q Consensus 223 GG~~~~~~~l~d~~~ld~~~~~~W~W~~~~~~~P~~R~~hs~~~~~~~i~V~GG~~~~~~~~~~~~~v~~yd~~t~~W~~ 302 (769)
... .+.+..|+..+ ++........ .....-.+.++..+.+|+..|...-. ......+.++|..+++...
T Consensus 214 d~~------~~~I~~~~~~~-G~~~~~~~~~--~~~~~~~~~~~~pg~~~~~~g~~~v~--~~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 214 DRE------NGRIQCFKTDT-KEFVREIKHA--SFGRNVFAISYIPGFLFAVNGKPYFG--DQEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp ETT------TTEEEEEETTT-CCEEEEECCT--TTTTCEEEEEEETTEEEEEECCCCTT--CSCCCCEEEEETTTCCEEE
T ss_pred ECC------CCEEEEEECCC-CcEEEEEecc--ccCCCcceeeecCCEEEEeCCCEEec--cCCCcEEEEEEcCCCeEEE
Confidence 642 24577788762 3333332211 11111123444457888877753211 1124579999988876554
Q ss_pred c
Q 004198 303 R 303 (769)
Q Consensus 303 ~ 303 (769)
.
T Consensus 283 ~ 283 (329)
T 3fvz_A 283 V 283 (329)
T ss_dssp E
T ss_pred E
Confidence 3
Done!