Query 004203
Match_columns 768
No_of_seqs 517 out of 3524
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 17:32:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004203.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004203hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 2.1E-25 7.1E-30 257.5 41.4 243 73-324 63-345 (611)
2 4gqb_B Methylosome protein 50; 99.9 1.7E-25 5.9E-30 241.5 32.1 172 80-254 92-276 (344)
3 2aq5_A Coronin-1A; WD40 repeat 99.9 2.5E-25 8.5E-30 241.1 31.7 210 30-253 6-238 (402)
4 1vyh_C Platelet-activating fac 99.9 4.8E-25 1.6E-29 242.0 32.3 244 74-324 113-401 (410)
5 3ow8_A WD repeat-containing pr 99.9 3.7E-25 1.3E-29 235.3 28.9 238 80-324 47-311 (321)
6 4ery_A WD repeat-containing pr 99.9 6.1E-24 2.1E-28 221.5 34.7 240 76-321 30-297 (312)
7 3frx_A Guanine nucleotide-bind 99.9 1.6E-24 5.4E-29 229.3 30.1 185 80-268 29-234 (319)
8 2ynn_A Coatomer subunit beta'; 99.9 3.1E-24 1.1E-28 225.1 31.1 237 75-317 19-284 (304)
9 2xzm_R RACK1; ribosome, transl 99.9 1E-23 3.6E-28 224.6 33.8 240 80-324 38-330 (343)
10 3sfz_A APAF-1, apoptotic pepti 99.9 6.6E-23 2.3E-27 252.8 44.7 249 73-324 619-903 (1249)
11 1got_B GT-beta; complex (GTP-b 99.9 1.7E-23 5.9E-28 223.0 33.2 239 76-323 62-332 (340)
12 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.5E-23 5E-28 224.3 30.7 179 75-255 22-214 (345)
13 2pm7_B Protein transport prote 99.9 3E-23 1E-27 216.9 32.1 223 76-325 16-276 (297)
14 2ynn_A Coatomer subunit beta'; 99.9 1.4E-23 4.7E-28 220.2 29.4 190 76-268 62-266 (304)
15 4g56_B MGC81050 protein; prote 99.9 1.3E-23 4.4E-28 226.7 28.7 172 81-255 105-289 (357)
16 1vyh_C Platelet-activating fac 99.9 3.7E-23 1.3E-27 227.0 31.8 190 76-269 157-377 (410)
17 1got_B GT-beta; complex (GTP-b 99.9 1.3E-23 4.4E-28 223.9 27.0 171 81-255 154-332 (340)
18 2pbi_B Guanine nucleotide-bind 99.9 5E-23 1.7E-27 221.6 31.7 214 76-323 113-346 (354)
19 3ow8_A WD repeat-containing pr 99.9 2.3E-23 7.8E-28 221.5 28.5 187 76-266 87-284 (321)
20 4gqb_B Methylosome protein 50; 99.9 9.8E-24 3.4E-28 227.8 25.9 177 75-255 133-319 (344)
21 3vl1_A 26S proteasome regulato 99.9 4.4E-23 1.5E-27 222.4 30.8 245 76-323 104-408 (420)
22 3iz6_a 40S ribosomal protein R 99.9 1.6E-23 5.6E-28 226.9 23.8 248 75-324 72-365 (380)
23 4e54_B DNA damage-binding prot 99.9 5.1E-23 1.7E-27 226.7 27.3 188 80-268 131-334 (435)
24 2hes_X YDR267CP; beta-propelle 99.9 2.2E-22 7.6E-27 213.8 31.1 176 83-260 26-229 (330)
25 1gxr_A ESG1, transducin-like e 99.9 5.5E-22 1.9E-26 205.3 32.6 218 75-324 103-327 (337)
26 2pbi_B Guanine nucleotide-bind 99.9 1.9E-22 6.4E-27 217.0 29.7 175 77-255 162-346 (354)
27 3ei3_B DNA damage-binding prot 99.9 8.6E-22 2.9E-26 210.9 33.8 242 76-321 80-370 (383)
28 1erj_A Transcriptional repress 99.9 4.3E-22 1.5E-26 216.7 31.3 188 75-263 129-343 (393)
29 1erj_A Transcriptional repress 99.9 2.7E-22 9.2E-27 218.3 29.6 185 75-261 70-287 (393)
30 3dwl_C Actin-related protein 2 99.9 3E-23 1E-27 220.9 21.4 176 79-255 21-225 (377)
31 1nr0_A Actin interacting prote 99.9 9.1E-22 3.1E-26 227.1 35.0 187 76-263 110-357 (611)
32 3dm0_A Maltose-binding peripla 99.9 1.9E-22 6.6E-27 235.4 29.5 181 79-263 393-594 (694)
33 3jrp_A Fusion protein of prote 99.9 9E-22 3.1E-26 207.1 31.8 223 75-324 17-277 (379)
34 3bg1_A Protein SEC13 homolog; 99.9 9.6E-23 3.3E-27 215.3 22.4 178 77-254 21-235 (316)
35 3frx_A Guanine nucleotide-bind 99.9 6.6E-22 2.2E-26 209.2 28.7 175 75-254 71-256 (319)
36 2ymu_A WD-40 repeat protein; u 99.9 1.1E-21 3.9E-26 220.6 32.4 216 75-323 350-569 (577)
37 3zwl_B Eukaryotic translation 99.9 1.5E-21 5E-26 204.2 30.9 243 75-324 38-336 (369)
38 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.4E-21 4.8E-26 208.9 31.2 180 75-255 67-272 (345)
39 1pgu_A Actin interacting prote 99.9 6.6E-21 2.3E-25 214.5 38.0 185 77-268 26-245 (615)
40 3f3f_A Nucleoporin SEH1; struc 99.9 7.3E-22 2.5E-26 203.1 26.8 194 76-270 18-346 (351)
41 3dw8_B Serine/threonine-protei 99.9 1.3E-21 4.5E-26 212.2 28.6 191 76-268 35-323 (447)
42 4ery_A WD repeat-containing pr 99.9 2E-21 6.8E-26 202.5 28.1 150 102-255 18-169 (312)
43 1gxr_A ESG1, transducin-like e 99.9 8E-21 2.7E-25 196.5 32.4 216 75-323 57-285 (337)
44 3k26_A Polycomb protein EED; W 99.9 1.6E-21 5.5E-26 204.1 27.4 242 80-323 33-355 (366)
45 2pm9_A Protein WEB1, protein t 99.9 1.7E-21 5.7E-26 209.0 28.0 194 75-270 73-303 (416)
46 3iz6_a 40S ribosomal protein R 99.9 4.4E-22 1.5E-26 215.6 23.5 175 80-255 169-364 (380)
47 4g56_B MGC81050 protein; prote 99.9 4.6E-22 1.6E-26 214.5 22.8 177 75-255 145-332 (357)
48 4aow_A Guanine nucleotide-bind 99.9 1.1E-20 3.9E-25 196.5 32.2 242 79-324 49-327 (340)
49 3sfz_A APAF-1, apoptotic pepti 99.9 3E-20 1E-24 229.2 41.4 199 102-322 610-817 (1249)
50 2aq5_A Coronin-1A; WD40 repeat 99.9 2.4E-21 8.2E-26 209.8 26.8 178 76-255 88-287 (402)
51 2hes_X YDR267CP; beta-propelle 99.9 3.9E-21 1.3E-25 204.2 27.2 179 75-255 64-269 (330)
52 4gq1_A NUP37; propeller, trans 99.9 3.5E-22 1.2E-26 218.0 17.7 232 80-322 100-378 (393)
53 2xzm_R RACK1; ribosome, transl 99.9 1E-20 3.4E-25 201.5 28.5 183 75-263 82-287 (343)
54 4aez_A CDC20, WD repeat-contai 99.9 1E-20 3.5E-25 205.4 29.1 236 81-323 103-369 (401)
55 1k8k_C P40, ARP2/3 complex 41 99.9 8.1E-21 2.8E-25 200.1 27.3 178 77-255 16-222 (372)
56 2pm7_B Protein transport prote 99.9 3.7E-21 1.3E-25 201.0 24.3 176 80-255 66-274 (297)
57 3i2n_A WD repeat-containing pr 99.9 5.7E-21 1.9E-25 199.7 25.5 227 81-320 80-338 (357)
58 4gga_A P55CDC, cell division c 99.9 3.6E-20 1.2E-24 202.7 32.6 237 81-324 116-385 (420)
59 2ymu_A WD-40 repeat protein; u 99.9 3.5E-20 1.2E-24 208.5 33.1 173 76-255 310-487 (577)
60 1r5m_A SIR4-interacting protei 99.9 1E-20 3.6E-25 201.6 27.3 239 77-323 53-350 (425)
61 3mmy_A MRNA export factor; mRN 99.9 9.9E-21 3.4E-25 197.8 26.2 211 81-324 54-336 (368)
62 4a11_B DNA excision repair pro 99.9 1.2E-19 4.1E-24 192.8 34.9 246 75-324 49-355 (408)
63 4aow_A Guanine nucleotide-bind 99.9 2.5E-20 8.4E-25 193.9 28.7 177 78-255 137-326 (340)
64 3vl1_A 26S proteasome regulato 99.9 9.3E-21 3.2E-25 204.2 26.1 163 79-243 66-234 (420)
65 3dwl_C Actin-related protein 2 99.9 1.3E-21 4.3E-26 208.3 18.9 179 75-254 61-270 (377)
66 4aez_A CDC20, WD repeat-contai 99.9 1.7E-20 5.8E-25 203.7 27.8 182 80-262 185-381 (401)
67 3v7d_B Cell division control p 99.9 4.3E-20 1.5E-24 202.8 31.1 233 80-322 131-410 (464)
68 2j04_B YDR362CP, TAU91; beta p 99.9 2.4E-21 8.3E-26 222.0 21.6 170 81-255 225-417 (524)
69 3zwl_B Eukaryotic translation 99.9 3.8E-20 1.3E-24 193.5 27.8 218 102-324 27-280 (369)
70 1r5m_A SIR4-interacting protei 99.9 3.4E-20 1.2E-24 197.7 27.6 245 74-324 113-415 (425)
71 2pm9_A Protein WEB1, protein t 99.9 1.4E-20 4.7E-25 201.8 24.3 220 80-323 34-283 (416)
72 3jrp_A Fusion protein of prote 99.9 2.6E-20 8.9E-25 195.9 25.6 181 81-261 69-287 (379)
73 3mkq_A Coatomer beta'-subunit; 99.9 3.6E-20 1.2E-24 217.1 29.1 237 75-318 19-285 (814)
74 4ggc_A P55CDC, cell division c 99.9 7.8E-19 2.7E-23 180.8 35.0 234 83-323 38-304 (318)
75 4h5i_A Guanine nucleotide-exch 99.9 1.7E-20 5.8E-25 203.1 23.1 224 74-325 87-334 (365)
76 3f3f_A Nucleoporin SEH1; struc 99.9 2.8E-20 9.6E-25 191.3 23.5 123 102-224 6-146 (351)
77 4e54_B DNA damage-binding prot 99.9 1.7E-20 5.7E-25 206.6 23.3 188 104-323 116-316 (435)
78 2xyi_A Probable histone-bindin 99.9 6.8E-20 2.3E-24 201.7 27.3 174 80-255 140-341 (430)
79 1sq9_A Antiviral protein SKI8; 99.9 5.6E-20 1.9E-24 196.2 25.8 177 82-263 82-324 (397)
80 1k8k_C P40, ARP2/3 complex 41 99.9 3.2E-19 1.1E-23 187.9 31.2 176 74-253 57-262 (372)
81 2j04_B YDR362CP, TAU91; beta p 99.9 7.5E-21 2.6E-25 217.9 20.2 211 82-323 174-417 (524)
82 3bg1_A Protein SEC13 homolog; 99.9 7.1E-21 2.4E-25 201.0 18.4 176 80-255 70-282 (316)
83 1sq9_A Antiviral protein SKI8; 99.9 5.6E-20 1.9E-24 196.2 25.2 164 79-247 135-366 (397)
84 3dm0_A Maltose-binding peripla 99.9 9.5E-20 3.3E-24 212.7 29.2 179 76-255 479-682 (694)
85 1yfq_A Cell cycle arrest prote 99.8 9.2E-20 3.2E-24 190.1 24.4 174 76-255 18-214 (342)
86 3k26_A Polycomb protein EED; W 99.8 2.5E-20 8.5E-25 195.1 20.0 191 81-274 85-332 (366)
87 4h5i_A Guanine nucleotide-exch 99.8 4.4E-20 1.5E-24 199.9 22.6 178 74-255 138-332 (365)
88 3jro_A Fusion protein of prote 99.8 1.4E-19 4.8E-24 214.6 28.8 177 78-255 18-227 (753)
89 3gre_A Serine/threonine-protei 99.8 6E-20 2.1E-24 200.0 22.3 192 74-269 68-300 (437)
90 3lrv_A PRE-mRNA-splicing facto 99.8 7.3E-20 2.5E-24 194.5 22.1 177 80-261 47-244 (343)
91 3lrv_A PRE-mRNA-splicing facto 99.8 5E-20 1.7E-24 195.8 20.8 171 84-255 88-280 (343)
92 3i2n_A WD repeat-containing pr 99.8 8.9E-20 3.1E-24 190.6 21.8 172 79-255 28-232 (357)
93 3mkq_A Coatomer beta'-subunit; 99.8 5.7E-19 1.9E-23 207.0 30.3 190 73-265 59-263 (814)
94 4a11_B DNA excision repair pro 99.8 1.2E-19 4E-24 192.9 22.2 215 91-323 23-265 (408)
95 2hqs_A Protein TOLB; TOLB, PAL 99.8 7.9E-19 2.7E-23 193.7 29.3 232 81-344 143-393 (415)
96 3ei3_B DNA damage-binding prot 99.8 3.4E-19 1.2E-23 190.7 25.3 144 80-225 130-286 (383)
97 3odt_A Protein DOA1; ubiquitin 99.8 2.3E-18 8E-23 176.5 30.2 170 75-255 65-244 (313)
98 3dw8_B Serine/threonine-protei 99.8 1.1E-19 3.6E-24 197.2 21.3 233 82-322 108-435 (447)
99 2ovr_B FBW7, F-BOX/WD repeat p 99.8 2.5E-18 8.7E-23 188.6 31.5 230 80-323 128-380 (445)
100 2j04_A TAU60, YPL007P, hypothe 99.8 9.4E-20 3.2E-24 209.7 20.8 231 72-321 88-348 (588)
101 4gga_A P55CDC, cell division c 99.8 1.7E-18 5.7E-23 189.4 29.7 156 103-261 226-395 (420)
102 2vdu_B TRNA (guanine-N(7)-)-me 99.8 2E-18 6.9E-23 190.5 29.2 160 105-268 100-278 (450)
103 1yfq_A Cell cycle arrest prote 99.8 6.4E-19 2.2E-23 183.8 23.8 176 75-255 62-271 (342)
104 2ovr_B FBW7, F-BOX/WD repeat p 99.8 3.2E-18 1.1E-22 187.8 29.9 244 81-336 169-440 (445)
105 1p22_A F-BOX/WD-repeat protein 99.8 3.3E-18 1.1E-22 187.7 28.7 178 79-268 141-332 (435)
106 3gre_A Serine/threonine-protei 99.8 5.5E-19 1.9E-23 192.5 21.5 194 75-270 117-368 (437)
107 3mmy_A MRNA export factor; mRN 99.8 1.7E-18 5.8E-23 180.9 24.4 176 76-255 93-335 (368)
108 2vdu_B TRNA (guanine-N(7)-)-me 99.8 1.1E-18 3.7E-23 192.7 23.6 175 75-254 108-326 (450)
109 2xyi_A Probable histone-bindin 99.8 1.2E-18 4.3E-23 191.6 23.9 174 82-255 195-398 (430)
110 1pgu_A Actin interacting prote 99.8 3.7E-18 1.3E-22 192.1 26.9 190 73-269 68-291 (615)
111 3v7d_B Cell division control p 99.8 2.8E-18 9.4E-23 188.4 25.2 171 78-255 277-451 (464)
112 3odt_A Protein DOA1; ubiquitin 99.8 2.4E-18 8.3E-23 176.4 23.0 167 80-255 113-285 (313)
113 1l0q_A Surface layer protein; 99.8 1.2E-17 4.1E-22 178.5 28.6 166 82-254 3-176 (391)
114 2oaj_A Protein SNI1; WD40 repe 99.8 1.7E-18 5.7E-23 210.2 24.7 161 79-244 445-690 (902)
115 3bws_A Protein LP49; two-domai 99.8 7.9E-18 2.7E-22 182.4 26.4 171 79-254 132-321 (433)
116 4ggc_A P55CDC, cell division c 99.8 2.7E-17 9.2E-22 169.3 28.0 180 73-255 71-304 (318)
117 3jro_A Fusion protein of prote 99.8 2.3E-18 7.8E-23 204.3 22.6 181 81-261 67-285 (753)
118 2oaj_A Protein SNI1; WD40 repe 99.8 3E-18 1E-22 208.0 24.1 183 73-262 21-243 (902)
119 4gq1_A NUP37; propeller, trans 99.8 1.1E-18 3.6E-23 190.4 16.5 173 80-255 155-379 (393)
120 3vu4_A KMHSV2; beta-propeller 99.8 2.3E-17 7.8E-22 177.4 26.5 182 75-262 25-272 (355)
121 1l0q_A Surface layer protein; 99.8 9.7E-17 3.3E-21 171.4 31.0 174 75-254 37-218 (391)
122 3bws_A Protein LP49; two-domai 99.8 4.5E-17 1.5E-21 176.5 28.0 227 78-322 178-419 (433)
123 2j04_A TAU60, YPL007P, hypothe 99.8 9.1E-18 3.1E-22 193.2 23.0 162 85-254 58-243 (588)
124 2w18_A PALB2, fancn, partner a 99.8 6.1E-18 2.1E-22 184.3 20.0 161 89-255 155-346 (356)
125 3vu4_A KMHSV2; beta-propeller 99.8 2.8E-17 9.6E-22 176.7 20.8 169 85-255 75-325 (355)
126 1p22_A F-BOX/WD-repeat protein 99.7 7.8E-17 2.7E-21 176.8 22.4 167 80-255 222-403 (435)
127 2ojh_A Uncharacterized protein 99.7 3.2E-16 1.1E-20 157.8 23.1 164 87-255 18-192 (297)
128 2hqs_A Protein TOLB; TOLB, PAL 99.7 5.1E-16 1.7E-20 171.2 26.7 173 76-255 185-373 (415)
129 2w18_A PALB2, fancn, partner a 99.7 9.5E-17 3.3E-21 174.9 20.1 140 78-220 190-356 (356)
130 2oit_A Nucleoporin 214KDA; NH2 99.7 7.9E-16 2.7E-20 171.5 24.7 176 75-255 42-260 (434)
131 2ojh_A Uncharacterized protein 99.7 5E-15 1.7E-19 149.0 27.8 233 76-327 48-295 (297)
132 3u4y_A Uncharacterized protein 99.7 4.5E-15 1.5E-19 154.8 26.2 174 79-254 8-194 (331)
133 1xfd_A DIP, dipeptidyl aminope 99.7 1.7E-16 5.7E-21 184.4 16.9 168 80-254 27-273 (723)
134 2ecf_A Dipeptidyl peptidase IV 99.7 1.9E-15 6.5E-20 176.3 23.8 174 75-255 42-305 (741)
135 1nir_A Nitrite reductase; hemo 99.7 2.4E-14 8.1E-19 164.4 30.9 260 74-338 183-514 (543)
136 1nir_A Nitrite reductase; hemo 99.7 1.8E-14 6E-19 165.5 27.6 238 79-321 147-438 (543)
137 1ri6_A Putative isomerase YBHE 99.6 2.3E-14 7.7E-19 148.7 25.4 175 84-260 8-208 (343)
138 1xfd_A DIP, dipeptidyl aminope 99.6 1.2E-14 4E-19 168.8 25.8 228 75-325 66-381 (723)
139 1z68_A Fibroblast activation p 99.6 1.2E-15 4.1E-20 177.8 16.5 165 83-252 28-269 (719)
140 2ecf_A Dipeptidyl peptidase IV 99.6 1.5E-14 5.3E-19 168.6 25.3 226 107-340 36-323 (741)
141 3vgz_A Uncharacterized protein 99.6 1E-13 3.6E-18 144.9 28.6 170 79-254 98-290 (353)
142 2z3z_A Dipeptidyl aminopeptida 99.6 3.5E-14 1.2E-18 164.9 26.9 235 78-340 129-437 (706)
143 3vgz_A Uncharacterized protein 99.6 9.4E-14 3.2E-18 145.2 27.2 176 75-254 46-249 (353)
144 4a5s_A Dipeptidyl peptidase 4 99.6 2.3E-14 7.7E-19 169.2 24.2 170 79-254 26-278 (740)
145 3hfq_A Uncharacterized protein 99.6 8.1E-14 2.8E-18 147.1 25.2 174 79-255 49-259 (347)
146 1pby_B Quinohemoprotein amine 99.6 1E-13 3.5E-18 143.4 25.4 141 82-224 2-166 (337)
147 2oit_A Nucleoporin 214KDA; NH2 99.6 1.4E-14 4.6E-19 161.5 19.8 148 74-223 97-280 (434)
148 3u4y_A Uncharacterized protein 99.6 2.3E-13 7.9E-18 141.8 25.9 178 74-254 44-239 (331)
149 2z3z_A Dipeptidyl aminopeptida 99.6 3.3E-14 1.1E-18 165.1 21.0 168 82-253 93-329 (706)
150 3pe7_A Oligogalacturonate lyas 99.6 5.9E-13 2E-17 141.9 28.8 172 79-255 45-257 (388)
151 1z68_A Fibroblast activation p 99.6 2.6E-14 8.8E-19 166.6 18.4 176 76-253 66-329 (719)
152 1k32_A Tricorn protease; prote 99.6 5.2E-13 1.8E-17 163.6 28.1 169 79-255 306-491 (1045)
153 1jmx_B Amine dehydrogenase; ox 99.5 4.8E-13 1.6E-17 139.3 23.6 143 79-224 9-178 (349)
154 4a5s_A Dipeptidyl peptidase 4 99.5 2.3E-13 7.7E-18 160.7 23.0 225 109-339 18-295 (740)
155 1pby_B Quinohemoprotein amine 99.5 6.5E-13 2.2E-17 137.3 22.9 167 79-254 43-298 (337)
156 1ri6_A Putative isomerase YBHE 99.5 2.2E-12 7.5E-17 133.7 26.6 175 76-254 44-249 (343)
157 1k32_A Tricorn protease; prote 99.5 2.9E-13 1E-17 165.8 23.1 139 80-219 347-500 (1045)
158 3hfq_A Uncharacterized protein 99.5 1.1E-12 3.6E-17 138.5 22.8 148 105-254 37-205 (347)
159 3o4h_A Acylamino-acid-releasin 99.5 3.5E-13 1.2E-17 153.5 19.0 166 77-252 29-211 (582)
160 3pe7_A Oligogalacturonate lyas 99.5 1.9E-12 6.7E-17 137.9 23.1 216 103-342 26-277 (388)
161 1jmx_B Amine dehydrogenase; ox 99.5 1.5E-12 5E-17 135.6 18.7 167 78-254 51-313 (349)
162 3scy_A Hypothetical bacterial 99.4 2E-11 7E-16 129.6 26.1 175 77-255 57-278 (361)
163 1jof_A Carboxy-CIS,CIS-muconat 99.4 6.4E-12 2.2E-16 135.0 22.0 179 75-255 45-274 (365)
164 3scy_A Hypothetical bacterial 99.4 1.7E-11 5.8E-16 130.2 24.5 173 80-255 108-325 (361)
165 3c5m_A Oligogalacturonate lyas 99.4 7.3E-12 2.5E-16 133.0 19.5 160 91-255 60-257 (396)
166 3azo_A Aminopeptidase; POP fam 99.4 6.3E-12 2.2E-16 144.8 20.1 236 79-348 88-379 (662)
167 3o4h_A Acylamino-acid-releasin 99.4 2.5E-12 8.6E-17 146.4 14.9 166 77-255 118-301 (582)
168 3azo_A Aminopeptidase; POP fam 99.4 2.1E-11 7.1E-16 140.5 22.1 172 81-255 35-260 (662)
169 1jof_A Carboxy-CIS,CIS-muconat 99.3 6.2E-11 2.1E-15 127.3 22.3 146 106-254 38-211 (365)
170 2xdw_A Prolyl endopeptidase; a 99.3 2.4E-10 8.3E-15 134.0 27.6 237 77-340 132-416 (710)
171 2bkl_A Prolyl endopeptidase; m 99.3 3.1E-10 1.1E-14 132.9 24.5 239 77-345 128-404 (695)
172 3c5m_A Oligogalacturonate lyas 99.2 4.8E-11 1.7E-15 126.6 14.9 142 108-254 36-207 (396)
173 2dg1_A DRP35, lactonase; beta 99.2 6E-09 2.1E-13 109.0 29.8 174 79-253 54-250 (333)
174 3fvz_A Peptidyl-glycine alpha- 99.2 2.8E-09 9.5E-14 113.0 26.1 155 91-248 69-252 (329)
175 2gop_A Trilobed protease; beta 99.2 1.3E-09 4.4E-14 114.4 22.2 153 90-255 42-234 (347)
176 3e5z_A Putative gluconolactona 99.2 3.2E-09 1.1E-13 109.8 23.4 169 82-253 41-235 (296)
177 1qks_A Cytochrome CD1 nitrite 99.2 3.3E-09 1.1E-13 122.8 25.2 169 81-254 167-407 (567)
178 2xdw_A Prolyl endopeptidase; a 99.1 5.1E-09 1.7E-13 122.8 26.2 146 105-255 122-305 (710)
179 2oiz_A Aromatic amine dehydrog 99.1 1.4E-09 4.8E-14 117.7 18.4 96 89-187 29-146 (361)
180 2gop_A Trilobed protease; beta 99.1 8.3E-09 2.8E-13 108.2 23.6 160 77-253 66-279 (347)
181 2oiz_A Aromatic amine dehydrog 99.1 3.3E-09 1.1E-13 114.8 19.1 170 74-248 54-360 (361)
182 3dsm_A Uncharacterized protein 99.1 3.5E-08 1.2E-12 104.9 26.3 172 79-254 52-243 (328)
183 1xip_A Nucleoporin NUP159; bet 99.1 2.5E-09 8.4E-14 118.4 17.7 170 73-255 41-233 (388)
184 1q7f_A NHL, brain tumor CG1071 99.0 4.8E-08 1.6E-12 100.0 25.3 166 80-252 87-267 (286)
185 3no2_A Uncharacterized protein 99.0 1.9E-08 6.7E-13 105.1 22.0 166 79-254 3-183 (276)
186 1yr2_A Prolyl oligopeptidase; 99.0 1.2E-08 4E-13 120.5 22.7 238 77-344 170-447 (741)
187 2dg1_A DRP35, lactonase; beta 99.0 4.1E-09 1.4E-13 110.3 16.1 147 103-254 40-200 (333)
188 3fvz_A Peptidyl-glycine alpha- 99.0 1.5E-08 5.2E-13 107.3 20.1 174 75-254 96-309 (329)
189 3iuj_A Prolyl endopeptidase; h 99.0 3.3E-08 1.1E-12 116.1 23.3 240 77-345 136-412 (693)
190 1q7f_A NHL, brain tumor CG1071 98.9 8.3E-08 2.8E-12 98.3 22.7 170 77-253 37-224 (286)
191 2bkl_A Prolyl endopeptidase; m 98.9 2E-08 6.8E-13 117.6 19.2 143 105-255 118-289 (695)
192 3g4e_A Regucalcin; six bladed 98.9 4.1E-07 1.4E-11 94.9 26.0 177 74-253 18-216 (297)
193 1rwi_B Serine/threonine-protei 98.9 1.6E-07 5.6E-12 94.6 20.9 168 80-252 77-250 (270)
194 3e5z_A Putative gluconolactona 98.9 1E-07 3.5E-12 98.4 19.8 170 77-255 76-276 (296)
195 3dsm_A Uncharacterized protein 98.8 1.8E-07 6.2E-12 99.4 21.2 169 79-254 93-285 (328)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 1.3E-06 4.4E-11 89.9 26.2 163 87-253 42-243 (314)
197 3iuj_A Prolyl endopeptidase; h 98.8 1.4E-07 4.9E-12 110.7 21.4 208 105-342 126-363 (693)
198 1yr2_A Prolyl oligopeptidase; 98.8 2.7E-07 9.2E-12 108.9 23.1 145 106-255 161-335 (741)
199 2ghs_A AGR_C_1268P; regucalcin 98.7 2.9E-06 9.8E-11 90.0 26.7 168 80-253 60-247 (326)
200 3dr2_A Exported gluconolactona 98.7 6E-07 2.1E-11 93.8 21.1 171 79-252 55-255 (305)
201 1rwi_B Serine/threonine-protei 98.7 4.5E-07 1.6E-11 91.4 19.3 169 79-253 33-209 (270)
202 3no2_A Uncharacterized protein 98.7 1E-06 3.6E-11 92.0 19.8 166 79-253 46-230 (276)
203 2mad_H Methylamine dehydrogena 98.6 4.7E-06 1.6E-10 91.0 24.5 92 92-187 48-162 (373)
204 2z2n_A Virginiamycin B lyase; 98.6 7.8E-06 2.7E-10 82.8 24.5 166 80-253 25-200 (299)
205 1qks_A Cytochrome CD1 nitrite 98.6 3.6E-06 1.2E-10 97.3 24.3 134 117-253 165-315 (567)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 3.3E-06 1.1E-10 86.8 21.4 166 82-254 83-286 (314)
207 2z2n_A Virginiamycin B lyase; 98.6 8.8E-06 3E-10 82.4 24.1 167 80-252 67-241 (299)
208 3g4e_A Regucalcin; six bladed 98.5 1.4E-05 4.8E-10 83.1 23.1 175 77-259 61-265 (297)
209 3c75_H MADH, methylamine dehyd 98.5 1.3E-05 4.4E-10 89.7 23.4 97 91-190 99-218 (426)
210 2qe8_A Uncharacterized protein 98.5 4.8E-05 1.6E-09 81.0 26.3 148 105-252 64-264 (343)
211 2qc5_A Streptogramin B lactona 98.4 4.2E-05 1.4E-09 77.4 24.5 167 80-253 30-205 (300)
212 2ece_A 462AA long hypothetical 98.4 1.4E-05 4.8E-10 89.8 22.6 175 79-255 94-340 (462)
213 1xip_A Nucleoporin NUP159; bet 98.4 1.5E-06 5.2E-11 96.0 14.6 119 80-208 96-230 (388)
214 3hrp_A Uncharacterized protein 98.4 9.3E-06 3.2E-10 89.6 20.8 170 76-252 137-339 (409)
215 2qc5_A Streptogramin B lactona 98.4 5.7E-05 2E-09 76.4 24.6 167 80-253 72-247 (300)
216 3hrp_A Uncharacterized protein 98.4 2.1E-05 7.3E-10 86.7 22.4 169 79-252 180-396 (409)
217 3sjl_D Methylamine dehydrogena 98.4 1.7E-05 5.7E-10 87.7 20.9 177 75-255 83-299 (386)
218 2ghs_A AGR_C_1268P; regucalcin 98.4 3.5E-05 1.2E-09 81.6 22.5 168 80-257 100-293 (326)
219 2mad_H Methylamine dehydrogena 98.3 0.00023 7.9E-09 77.5 27.4 108 114-225 27-160 (373)
220 3sjl_D Methylamine dehydrogena 98.2 1.1E-05 3.7E-10 89.2 14.6 139 112-254 37-206 (386)
221 2qe8_A Uncharacterized protein 98.2 5.3E-05 1.8E-09 80.7 19.5 164 90-256 92-311 (343)
222 2ece_A 462AA long hypothetical 98.2 3.7E-05 1.3E-09 86.3 18.9 164 91-255 164-400 (462)
223 3nok_A Glutaminyl cyclase; bet 98.2 4.7E-05 1.6E-09 80.0 18.3 172 80-258 64-257 (268)
224 3dr2_A Exported gluconolactona 98.2 1.9E-05 6.4E-10 82.4 15.0 139 107-254 44-206 (305)
225 3c75_H MADH, methylamine dehyd 98.2 5.9E-05 2E-09 84.3 19.9 134 117-254 82-246 (426)
226 3nol_A Glutamine cyclotransfer 98.1 4.9E-05 1.7E-09 79.6 16.9 173 80-259 52-248 (262)
227 2hz6_A Endoplasmic reticulum t 98.1 2.6E-07 8.8E-12 100.4 -0.4 140 80-226 8-154 (369)
228 2xe4_A Oligopeptidase B; hydro 98.1 0.00043 1.5E-08 82.2 26.1 225 92-346 202-466 (751)
229 2iwa_A Glutamine cyclotransfer 98.1 0.00011 3.9E-09 77.1 18.3 161 90-258 43-228 (266)
230 1mda_H Methylamine dehydrogena 98.1 4E-05 1.4E-09 84.1 14.8 87 92-181 47-158 (368)
231 3mbr_X Glutamine cyclotransfer 98.0 0.00026 8.8E-09 73.5 19.3 172 80-258 30-226 (243)
232 1fwx_A Nitrous oxide reductase 98.0 0.00015 5.1E-09 83.9 18.4 171 81-254 101-348 (595)
233 1npe_A Nidogen, entactin; glyc 98.0 0.00072 2.5E-08 68.7 21.5 143 109-254 37-185 (267)
234 1kb0_A Quinohemoprotein alcoho 98.0 0.00014 4.9E-09 85.5 18.3 160 92-254 284-538 (677)
235 2fp8_A Strictosidine synthase; 97.9 0.0009 3.1E-08 70.1 21.6 170 81-254 30-247 (322)
236 2xe4_A Oligopeptidase B; hydro 97.9 0.00061 2.1E-08 80.9 21.6 144 105-255 170-338 (751)
237 1yiq_A Quinohemoprotein alcoho 97.8 0.0005 1.7E-08 81.0 20.1 161 92-255 276-537 (689)
238 2hz6_A Endoplasmic reticulum t 97.7 1.5E-05 5E-10 86.5 4.4 127 118-255 8-138 (369)
239 3nol_A Glutamine cyclotransfer 97.7 0.0019 6.4E-08 67.7 19.4 133 110-248 45-183 (262)
240 2p4o_A Hypothetical protein; p 97.6 0.013 4.5E-07 60.9 25.2 162 86-251 48-227 (306)
241 3nok_A Glutaminyl cyclase; bet 97.6 0.0017 6E-08 68.1 17.9 132 110-248 57-192 (268)
242 1kb0_A Quinohemoprotein alcoho 97.6 0.00083 2.9E-08 79.0 17.2 78 111-189 246-354 (677)
243 1npe_A Nidogen, entactin; glyc 97.5 0.019 6.4E-07 58.2 23.9 165 83-253 50-224 (267)
244 3hxj_A Pyrrolo-quinoline quino 97.5 0.0011 3.7E-08 68.4 14.5 159 81-251 107-270 (330)
245 2iwa_A Glutamine cyclotransfer 97.5 0.0016 5.4E-08 68.4 15.4 134 110-248 23-163 (266)
246 3p5b_L Low density lipoprotein 97.5 0.097 3.3E-06 57.3 30.2 165 86-253 87-263 (400)
247 1ijq_A LDL receptor, low-densi 97.5 0.021 7.2E-07 60.2 23.9 162 90-254 9-182 (316)
248 3v65_B Low-density lipoprotein 97.4 0.0091 3.1E-07 65.1 21.5 165 87-254 92-264 (386)
249 1fwx_A Nitrous oxide reductase 97.4 0.00034 1.2E-08 81.0 10.5 163 90-255 174-407 (595)
250 3mbr_X Glutamine cyclotransfer 97.4 0.0092 3.2E-07 61.8 19.7 134 109-248 22-161 (243)
251 3v64_C Agrin; beta propeller, 97.4 0.017 5.9E-07 62.0 22.3 163 89-254 51-221 (349)
252 3hxj_A Pyrrolo-quinoline quino 97.3 0.0025 8.4E-08 65.6 14.0 161 79-251 145-310 (330)
253 2fp8_A Strictosidine synthase; 97.3 0.0054 1.8E-07 64.1 16.5 139 109-253 20-202 (322)
254 4a2l_A BT_4663, two-component 97.3 0.028 9.6E-07 66.5 24.6 177 73-254 359-561 (795)
255 1yiq_A Quinohemoprotein alcoho 97.2 0.0031 1.1E-07 74.3 14.5 81 128-210 454-537 (689)
256 1mda_H Methylamine dehydrogena 97.2 0.00084 2.9E-08 73.5 9.0 89 130-221 47-158 (368)
257 1kv9_A Type II quinohemoprotei 97.1 0.0072 2.5E-07 70.9 17.5 160 92-255 271-520 (668)
258 4a2l_A BT_4663, two-component 97.1 0.068 2.3E-06 63.2 25.5 179 72-253 311-515 (795)
259 3m0c_C LDL receptor, low-densi 97.1 0.19 6.4E-06 60.3 29.0 165 86-253 399-575 (791)
260 3s25_A Hypothetical 7-bladed b 97.0 0.078 2.7E-06 56.2 22.3 187 112-346 57-263 (302)
261 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.0076 2.6E-07 64.0 14.6 139 81-225 53-211 (376)
262 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.0038 1.3E-07 66.4 12.0 132 81-218 239-375 (376)
263 3v64_C Agrin; beta propeller, 97.0 0.1 3.4E-06 55.9 23.0 160 81-243 85-253 (349)
264 3tc9_A Hypothetical hydrolase; 96.9 0.012 4.1E-07 65.2 15.6 141 109-254 138-288 (430)
265 2ad6_A Methanol dehydrogenase 96.9 0.014 4.7E-07 67.2 16.2 137 116-255 310-526 (571)
266 3qqz_A Putative uncharacterize 96.8 0.079 2.7E-06 55.0 20.1 151 102-255 21-192 (255)
267 3v65_B Low-density lipoprotein 96.8 0.079 2.7E-06 57.6 21.0 160 81-243 128-296 (386)
268 1flg_A Protein (quinoprotein e 96.8 0.034 1.2E-06 64.2 19.0 162 91-255 291-548 (582)
269 4hw6_A Hypothetical protein, I 96.8 0.056 1.9E-06 60.0 20.0 139 81-221 152-304 (433)
270 3v9f_A Two-component system se 96.8 0.061 2.1E-06 63.5 21.1 173 73-253 365-556 (781)
271 3tc9_A Hypothetical hydrolase; 96.7 0.034 1.2E-06 61.6 17.5 139 81-221 149-301 (430)
272 1ijq_A LDL receptor, low-densi 96.7 0.29 9.8E-06 51.4 23.9 163 84-253 45-224 (316)
273 3sov_A LRP-6, low-density lipo 96.7 0.059 2E-06 57.2 18.7 163 89-254 11-184 (318)
274 1w6s_A Methanol dehydrogenase 96.6 0.068 2.3E-06 62.1 19.6 136 117-255 318-535 (599)
275 2p4o_A Hypothetical protein; p 96.4 0.13 4.5E-06 53.3 18.8 141 110-255 119-277 (306)
276 4a0p_A LRP6, LRP-6, low-densit 96.4 0.4 1.4E-05 55.9 24.7 162 89-254 13-184 (628)
277 3v9f_A Two-component system se 96.4 0.22 7.5E-06 58.7 22.6 174 73-253 315-512 (781)
278 3p5b_L Low density lipoprotein 96.4 0.45 1.6E-05 51.9 23.5 166 84-254 127-307 (400)
279 3kya_A Putative phosphatase; s 96.3 0.061 2.1E-06 61.2 16.5 144 109-253 140-327 (496)
280 2p9w_A MAL S 1 allergenic prot 96.3 0.069 2.4E-06 57.7 16.0 142 110-254 15-203 (334)
281 3qqz_A Putative uncharacterize 96.3 0.74 2.5E-05 47.7 23.0 145 108-255 70-242 (255)
282 1k3i_A Galactose oxidase precu 96.3 0.093 3.2E-06 60.9 17.9 176 79-255 252-530 (656)
283 2p9w_A MAL S 1 allergenic prot 96.2 0.35 1.2E-05 52.1 20.5 171 81-255 25-253 (334)
284 1n7d_A LDL receptor, low-densi 96.1 0.054 1.9E-06 63.9 15.2 163 89-254 384-558 (699)
285 3sov_A LRP-6, low-density lipo 96.1 0.76 2.6E-05 48.6 22.7 166 82-253 48-224 (318)
286 1flg_A Protein (quinoprotein e 96.1 0.023 7.9E-07 65.6 11.5 82 128-211 465-549 (582)
287 2ad6_A Methanol dehydrogenase 96.0 0.017 6E-07 66.4 10.2 81 128-210 443-525 (571)
288 2xbg_A YCF48-like protein; pho 96.0 0.31 1.1E-05 51.3 19.2 138 105-250 160-307 (327)
289 3amr_A 3-phytase; beta-propell 96.0 0.26 8.7E-06 53.7 18.6 173 82-255 41-251 (355)
290 3m0c_C LDL receptor, low-densi 96.0 0.57 1.9E-05 56.2 23.2 166 83-253 438-618 (791)
291 3sre_A PON1, serum paraoxonase 95.9 0.45 1.5E-05 51.7 20.1 161 89-253 81-284 (355)
292 3s94_A LRP-6, low-density lipo 95.9 0.74 2.5E-05 53.4 23.2 163 88-253 15-188 (619)
293 3kya_A Putative phosphatase; s 95.8 0.28 9.7E-06 55.7 18.4 139 82-221 153-341 (496)
294 2ism_A Putative oxidoreductase 95.7 0.25 8.4E-06 53.0 16.9 141 109-252 32-219 (352)
295 4hw6_A Hypothetical protein, I 95.7 0.12 4E-06 57.4 14.7 144 108-254 139-291 (433)
296 1kv9_A Type II quinohemoprotei 95.6 0.087 3E-06 61.6 13.8 144 81-225 117-337 (668)
297 3a9g_A Putative uncharacterize 95.5 0.25 8.5E-06 53.2 16.1 140 109-251 30-213 (354)
298 3s25_A Hypothetical 7-bladed b 95.5 0.35 1.2E-05 51.1 16.8 181 116-345 22-223 (302)
299 1cru_A Protein (soluble quinop 95.4 0.49 1.7E-05 52.9 18.7 102 109-210 28-162 (454)
300 3das_A Putative oxidoreductase 95.4 0.44 1.5E-05 51.6 17.7 143 109-252 33-218 (347)
301 2g8s_A Glucose/sorbosone dehyd 95.3 0.22 7.4E-06 53.5 14.7 142 109-251 19-213 (353)
302 3amr_A 3-phytase; beta-propell 95.3 0.52 1.8E-05 51.2 17.6 129 90-220 98-262 (355)
303 3s94_A LRP-6, low-density lipo 95.1 3.5 0.00012 47.8 24.9 164 87-253 322-496 (619)
304 2xbg_A YCF48-like protein; pho 95.0 0.91 3.1E-05 47.8 18.2 143 106-253 120-267 (327)
305 1w6s_A Methanol dehydrogenase 94.7 0.33 1.1E-05 56.3 15.0 81 128-210 452-535 (599)
306 4a0p_A LRP6, LRP-6, low-densit 94.6 3.4 0.00012 48.0 23.3 164 84-253 52-223 (628)
307 1k3i_A Galactose oxidase precu 94.2 0.2 6.9E-06 58.0 11.8 112 112-224 190-326 (656)
308 3pbp_A Nucleoporin NUP82; beta 93.5 5.1 0.00017 44.7 20.5 130 78-210 29-198 (452)
309 1tl2_A L10, protein (tachylect 93.3 0.63 2.2E-05 47.7 12.0 138 109-253 42-199 (236)
310 3sre_A PON1, serum paraoxonase 92.5 4.4 0.00015 43.8 18.1 141 109-255 51-240 (355)
311 1n7d_A LDL receptor, low-densi 92.2 0.16 5.3E-06 60.0 6.5 135 88-224 472-617 (699)
312 3ott_A Two-component system se 91.9 20 0.00067 41.8 24.2 168 75-253 67-249 (758)
313 3ii7_A Kelch-like protein 7; p 91.1 10 0.00035 38.4 18.4 128 91-224 70-228 (306)
314 1tl2_A L10, protein (tachylect 91.1 1.4 4.9E-05 45.1 11.3 129 119-253 4-152 (236)
315 3pbp_A Nucleoporin NUP82; beta 91.0 10 0.00035 42.4 18.9 130 118-252 31-196 (452)
316 2ism_A Putative oxidoreductase 91.0 2.5 8.6E-05 45.0 14.0 102 149-254 30-153 (352)
317 3das_A Putative oxidoreductase 90.8 2.6 8.8E-05 45.5 13.9 112 143-255 25-159 (347)
318 2g8s_A Glucose/sorbosone dehyd 90.4 6 0.00021 42.1 16.3 142 111-253 133-340 (353)
319 3a9g_A Putative uncharacterize 89.6 3.5 0.00012 44.1 13.7 103 149-254 28-153 (354)
320 1cru_A Protein (soluble quinop 89.2 5 0.00017 44.6 15.0 106 149-255 26-163 (454)
321 2vpj_A Kelch-like protein 12; 88.4 19 0.00066 36.2 17.8 128 91-224 78-234 (301)
322 2xzh_A Clathrin heavy chain 1; 87.4 18 0.00062 39.2 17.1 119 128-255 48-171 (365)
323 3ii7_A Kelch-like protein 7; p 87.1 14 0.00048 37.5 15.8 131 90-224 23-181 (306)
324 3ott_A Two-component system se 84.4 66 0.0023 37.2 22.6 166 81-253 112-296 (758)
325 2vpj_A Kelch-like protein 12; 83.6 23 0.00078 35.7 15.4 128 91-224 128-281 (301)
326 2xn4_A Kelch-like protein 2; s 83.0 33 0.0011 34.6 16.3 128 91-224 77-232 (302)
327 2xn4_A Kelch-like protein 2; s 82.8 33 0.0011 34.5 16.2 127 92-224 125-279 (302)
328 1zgk_A Kelch-like ECH-associat 82.3 25 0.00085 35.8 15.1 128 91-224 90-243 (308)
329 2wg3_C Hedgehog-interacting pr 82.1 39 0.0013 37.6 17.7 102 110-211 16-158 (463)
330 4asc_A Kelch repeat and BTB do 81.8 29 0.001 35.3 15.5 130 91-224 13-177 (315)
331 1bpo_A Protein (clathrin); cla 81.4 25 0.00086 39.5 15.3 119 128-255 47-170 (494)
332 4asc_A Kelch repeat and BTB do 81.2 40 0.0014 34.3 16.2 103 118-224 98-224 (315)
333 1zgk_A Kelch-like ECH-associat 79.4 25 0.00085 35.8 14.0 128 91-224 137-290 (308)
334 2xzh_A Clathrin heavy chain 1; 78.7 76 0.0026 34.3 17.5 137 90-235 48-199 (365)
335 3ei3_A DNA damage-binding prot 78.7 61 0.0021 40.4 19.4 92 130-223 808-915 (1158)
336 3sbq_A Nitrous-oxide reductase 76.1 7 0.00024 45.1 9.0 101 108-210 323-453 (638)
337 1bpo_A Protein (clathrin); cla 72.5 1.2E+02 0.004 34.2 17.4 140 90-238 47-201 (494)
338 2be1_A Serine/threonine-protei 72.5 2.8 9.6E-05 45.1 4.5 108 119-226 10-135 (339)
339 2uvk_A YJHT; unknown function, 72.4 63 0.0022 33.3 15.0 100 118-219 65-224 (357)
340 2woz_A Kelch repeat and BTB do 71.4 91 0.0031 31.6 18.1 126 93-224 80-234 (318)
341 2zwa_A Leucine carboxyl methyl 67.5 47 0.0016 38.7 13.9 132 92-224 469-638 (695)
342 2wg3_C Hedgehog-interacting pr 67.4 39 0.0013 37.6 12.6 105 150-255 14-158 (463)
343 3ei3_A DNA damage-binding prot 61.5 3.1E+02 0.011 34.1 23.5 110 107-219 513-634 (1158)
344 2uvk_A YJHT; unknown function, 60.8 1.5E+02 0.0052 30.3 17.2 80 129-210 168-260 (357)
345 2zwa_A Leucine carboxyl methyl 59.8 80 0.0027 36.7 13.9 110 112-223 445-579 (695)
346 3b7f_A Glycosyl hydrolase, BNR 56.5 2E+02 0.0067 30.2 18.0 109 107-217 54-204 (394)
347 4gq2_M Nucleoporin NUP120; bet 55.7 42 0.0014 40.9 10.8 38 109-146 237-274 (950)
348 3sbq_A Nitrous-oxide reductase 53.1 45 0.0015 38.5 9.7 103 151-255 324-454 (638)
349 4hvt_A Ritya.17583.B, post-pro 50.2 3.7E+02 0.012 31.5 25.8 238 79-345 140-436 (711)
350 1yph_C Chymotrypsin A, chain B 47.8 13 0.00043 33.6 3.5 17 637-653 29-46 (131)
351 4a9v_A PHOX; hydrolase, beta-p 46.2 2.4E+02 0.0081 32.6 14.3 59 151-210 477-549 (592)
352 4gq2_M Nucleoporin NUP120; bet 45.9 1.4E+02 0.0047 36.3 13.2 38 151-189 237-274 (950)
353 2asu_B Hepatocyte growth facto 45.5 7.7 0.00026 38.6 1.8 76 637-719 26-107 (234)
354 1xi4_A Clathrin heavy chain; a 43.7 6E+02 0.021 32.8 18.3 136 89-225 123-293 (1630)
355 2woz_A Kelch repeat and BTB do 43.7 2.6E+02 0.0091 28.0 17.4 106 115-224 53-187 (318)
356 2be1_A Serine/threonine-protei 42.2 14 0.00047 39.7 3.2 65 126-191 64-140 (339)
357 1xi4_A Clathrin heavy chain; a 41.2 89 0.003 40.1 10.5 119 128-255 47-170 (1630)
358 1gvz_A Kallikrein-1E2; antigen 40.8 13 0.00044 36.9 2.6 67 637-718 28-117 (237)
359 3zwu_A Alkaline phosphatase PH 38.8 3.6E+02 0.012 31.0 14.6 57 152-209 478-548 (592)
360 3q6k_A 43.2 kDa salivary prote 37.8 2.1E+02 0.0073 30.9 11.9 92 130-221 124-253 (381)
361 1vqy_A Hypothetical protein AG 37.4 15 0.0005 33.1 2.2 21 620-640 11-31 (116)
362 4fhn_B Nucleoporin NUP120; pro 36.3 89 0.003 38.7 9.6 37 152-189 240-276 (1139)
363 1euf_A Duodenase; serine prote 35.6 23 0.00077 34.9 3.4 68 637-719 31-110 (227)
364 3gyl_B Prostasin; ENAC, zymoge 35.5 26 0.00089 34.9 3.9 72 637-718 28-111 (261)
365 3mhw_U Urokinase-type plasmino 33.8 26 0.00089 34.5 3.6 72 637-718 33-122 (247)
366 1a7s_A Heparin binding protein 32.8 31 0.0011 33.7 3.9 72 637-718 28-110 (225)
367 3rp2_A RAT MAST cell protease 32.6 28 0.00097 33.8 3.6 68 637-719 32-111 (224)
368 1mza_A Pro-granzyme K; apoptos 32.3 34 0.0012 33.7 4.2 73 637-719 30-114 (240)
369 1cgh_A Cathepsin G; inflammati 31.5 29 0.00098 34.0 3.4 68 637-719 31-110 (224)
370 4fhn_B Nucleoporin NUP120; pro 31.0 36 0.0012 42.1 4.9 38 109-146 239-276 (1139)
371 1si5_H Scatter factor, hepatoc 30.9 18 0.00062 35.9 1.8 74 637-719 27-106 (240)
372 1sqj_A OXG-RCBH, oligoxylogluc 30.1 5.9E+02 0.02 29.8 15.0 143 107-254 14-188 (789)
373 4ag1_A Chymase; hydrolase-de n 29.8 30 0.001 33.7 3.2 67 637-718 32-110 (226)
374 1hj8_A Trypsin I; hydrolase, r 29.3 37 0.0013 33.3 3.7 68 637-719 27-106 (222)
375 1fuj_A PR3, myeloblastin; hydr 29.3 47 0.0016 32.2 4.5 71 637-718 31-112 (221)
376 1elt_A Elastase; serine protei 29.2 21 0.00071 35.3 1.9 70 637-719 32-115 (236)
377 2zch_P Prostate-specific antig 28.8 29 0.001 34.2 2.9 17 637-653 28-45 (237)
378 1iau_A Granzyme B; hydrolase-h 28.1 31 0.0011 33.8 3.0 67 637-718 31-109 (227)
379 1t8o_A Chymotrypsin A; chymotr 28.0 37 0.0013 33.8 3.5 69 637-719 44-124 (245)
380 1gvk_B Elastase 1, peptide inh 28.0 34 0.0012 33.8 3.3 69 637-718 32-114 (240)
381 1orf_A Granzyme A; hydrolase-h 27.9 26 0.00089 34.5 2.4 69 637-719 28-108 (234)
382 1ym0_A Fibrinotic enzyme compo 27.7 21 0.00071 35.2 1.6 71 637-718 30-112 (238)
383 2xw9_A Complement factor D; im 27.6 42 0.0014 32.7 3.8 71 637-718 28-110 (228)
384 3fzz_A Granzyme C; hydrolase, 27.5 49 0.0017 32.1 4.3 67 637-718 32-110 (227)
385 1ao5_A Glandular kallikrein-13 27.5 24 0.00083 34.8 2.1 16 637-652 28-44 (237)
386 1pyt_D TC, PCPA-TC, chymotryps 27.2 45 0.0015 33.2 4.1 70 637-718 45-126 (251)
387 4dgj_A Enteropeptidase catalyt 26.2 20 0.00069 35.2 1.2 74 637-718 28-113 (235)
388 2bz6_H Blood coagulation facto 26.2 32 0.0011 34.3 2.7 72 637-718 28-111 (254)
389 2jde_A Urokinase-type plasmino 26.1 36 0.0012 34.3 3.0 72 637-718 56-145 (276)
390 1ddj_A Plasminogen; catalytic 25.7 38 0.0013 33.7 3.1 72 637-718 46-123 (247)
391 1bru_P Elastase, PPE; serine p 25.3 50 0.0017 32.6 3.9 70 637-719 32-115 (241)
392 3zwu_A Alkaline phosphatase PH 25.1 1.7E+02 0.0057 33.7 8.7 58 109-167 477-547 (592)
393 4i8h_A Cationic trypsin, beta- 25.0 35 0.0012 33.1 2.7 67 637-718 27-105 (223)
394 4a9v_A PHOX; hydrolase, beta-p 24.9 2.3E+02 0.008 32.6 9.7 60 108-168 476-548 (592)
395 2f91_A Hepatopancreas trypsin; 24.7 47 0.0016 32.7 3.6 74 637-719 32-118 (237)
396 1pq7_A Trypsin; ultra-high res 24.6 37 0.0013 33.2 2.7 69 637-719 28-106 (224)
397 2z7f_E Leukocyte elastase; ser 24.6 33 0.0011 33.4 2.3 72 637-719 28-110 (218)
398 1spj_A Kallikrein 1; serine pr 24.4 39 0.0013 33.2 2.9 16 637-652 28-44 (238)
399 3f7f_A Nucleoporin NUP120; nuc 24.3 1E+02 0.0034 36.5 6.7 36 110-147 224-259 (729)
400 2pka_A Kallikrein A; serine pr 23.9 28 0.00094 28.5 1.4 16 637-652 28-44 (80)
401 1lo6_A Kallikrein 6, HK6; seri 23.7 39 0.0013 33.1 2.7 16 637-652 28-44 (223)
402 1rtf_B (TC)-T-PA, two chain ti 23.4 38 0.0013 33.5 2.6 74 637-720 34-123 (252)
403 3ncl_A Suppressor of tumorigen 22.9 46 0.0016 32.6 3.1 75 637-718 29-118 (241)
404 3h7t_A Group 3 allergen smipp- 22.7 41 0.0014 32.6 2.7 69 637-719 28-108 (235)
405 1ton_A Tonin; hydrolase(serine 22.6 42 0.0014 32.9 2.7 16 637-652 26-42 (235)
406 1azz_A Collagenase; complex (s 22.3 25 0.00087 34.5 1.0 70 637-719 28-109 (226)
407 3b7f_A Glycosyl hydrolase, BNR 22.3 6.6E+02 0.023 26.0 20.8 143 109-253 116-296 (394)
408 3f7f_A Nucleoporin NUP120; nuc 22.2 1E+02 0.0035 36.4 6.2 30 161-190 230-259 (729)
409 3rm2_H Thrombin heavy chain; s 21.6 58 0.002 32.1 3.5 74 637-718 30-120 (259)
410 3mfj_A Cationic trypsin; serin 21.5 58 0.002 31.8 3.5 67 637-718 27-105 (223)
411 1fon_A Procarboxypeptidase A-S 20.8 24 0.00084 34.8 0.5 17 637-653 30-47 (240)
412 3h7o_A Group 3 allergen smipp- 20.6 34 0.0011 33.3 1.5 71 637-719 30-112 (228)
413 2cn3_A Xyloglucanase, beta-1,4 20.5 1E+03 0.035 27.4 15.1 101 109-210 24-151 (737)
414 1fxy_A Coagulation factor XA-t 20.4 61 0.0021 31.7 3.4 69 637-718 29-109 (228)
415 2bdy_A Thrombin; thrombin, com 20.1 78 0.0027 32.3 4.2 75 637-719 60-151 (289)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.95 E-value=2.1e-25 Score=257.52 Aligned_cols=243 Identities=14% Similarity=0.143 Sum_probs=185.7
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCEEEEEeCC----CeEEEEeCCCCeEE
Q 004203 73 IFEAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGD----HTVKIIDCQTGSCL 142 (768)
Q Consensus 73 l~~a~~d~g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSPDG~~LaSgS~D----gtVrVWDl~tg~~l 142 (768)
...+...++..|++++.|+.|++||..++ .+.+|.+.|.+++|+|||++|++++.+ +.|++|| +++..
T Consensus 63 ~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~ 140 (611)
T 1nr0_A 63 TVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSN 140 (611)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBC
T ss_pred EEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCc
Confidence 34555678999999999999999998643 356899999999999999999999875 4788887 56677
Q ss_pred EEEecCCCCcEEEEEccCCCC-EEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEECCe-EEEEEc
Q 004203 143 KVLHGHRRTPWVVRFHPLNPT-IIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGHK-LYIWRY 219 (768)
Q Consensus 143 ~~l~gH~g~V~sVafSP~dg~-lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~~LatgSdd~-I~IWDl 219 (768)
..+.+|.+.|++++|+| ++. .|++++.|++|++||..++++...+ +|...|.+++|+|||++|++++.|+ |++||+
T Consensus 141 ~~l~gh~~~v~~v~f~p-~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp BCCCCCSSCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ceecCCCCCceEEEECC-CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC
Confidence 78899999999999999 554 7999999999999999998888776 4889999999999999999999655 999999
Q ss_pred CCCccccCCeEe-------ecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCccc-----------
Q 004203 220 NMREETSSPRIV-------LRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR----------- 276 (768)
Q Consensus 220 ~t~~~~~~~~~l-------~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~----------- 276 (768)
.+++... .+ .+|...|.+++|+|||++|++++. +|++..++....+.....+..
T Consensus 220 ~~g~~~~---~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
T 1nr0_A 220 VDGTKTG---VFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 296 (611)
T ss_dssp TTCCEEE---ECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC
T ss_pred CCCcEee---eeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCE
Confidence 8876533 22 168999999999999998887664 788876554443322111100
Q ss_pred ----CCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecC
Q 004203 277 ----YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 277 ----~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d 324 (768)
.....+.+|+...+. ......+...++...+|+|||++|+....|
T Consensus 297 l~s~s~d~~i~~~~~~~~~---~~~~~~gh~~~v~~l~~spdg~~l~s~s~D 345 (611)
T 1nr0_A 297 LVSISANGFINFVNPELGS---IDQVRYGHNKAITALSSSADGKTLFSADAE 345 (611)
T ss_dssp EEEEETTCCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEeCCCcEEEEeCCCCC---cceEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 012334555543322 122223455677889999999999876443
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.95 E-value=1.7e-25 Score=241.49 Aligned_cols=172 Identities=15% Similarity=0.168 Sum_probs=148.1
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC--------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCC
Q 004203 80 ARRGLASWVEAESLHHLRPKYCP--------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~--------L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~ 151 (768)
....|++++.|+.|++||+.+++ +.+|.+.|++++|+|||++|++|+.|++|++||+++++++..+.+|.+.
T Consensus 92 ~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~ 171 (344)
T 4gqb_B 92 GERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQ 171 (344)
T ss_dssp TTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCc
Confidence 34689999999999999998763 3489999999999999999999999999999999999999999999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec---CCCCeEEEEEcCC-CCEEEEEECC-eEEEEEcCCCcccc
Q 004203 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHAS-GELLAVASGH-KLYIWRYNMREETS 226 (768)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~---h~~~V~svafSPD-G~~LatgSdd-~I~IWDl~t~~~~~ 226 (768)
|++++|+|++..+|++++.|++|+|||++++++...+. +...+.+++|+|+ +++|++++.+ .|++||+++++...
T Consensus 172 V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~ 251 (344)
T 4gqb_B 172 VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVL 251 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCE
T ss_pred eEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEE
Confidence 99999999555789999999999999999999887753 4557899999995 5688888855 59999999887543
Q ss_pred CCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 227 SPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 227 ~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
.+.+|...|++++|+|+|..+++++
T Consensus 252 ---~~~~h~~~v~~v~fsp~g~~~lasg 276 (344)
T 4gqb_B 252 ---SSAVHSQCVTGLVFSPHSVPFLASL 276 (344)
T ss_dssp ---EEECCSSCEEEEEECSSSSCCEEEE
T ss_pred ---EEcCCCCCEEEEEEccCCCeEEEEE
Confidence 6788999999999999996555444
No 3
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=2.5e-25 Score=241.13 Aligned_cols=210 Identities=16% Similarity=0.208 Sum_probs=177.9
Q ss_pred CCCCCcceecccccccccCCCccccceeecCCcceeecCCCCeEEEEEecCCCEEEEEeCCCeEEEEeCCCC--------
Q 004203 30 HRNSRLRNVFGLLAQREVAPRTKHSSKRLLGETARKCSGSFSQIFEAGRDARRGLASWVEAESLHHLRPKYC-------- 101 (768)
Q Consensus 30 ~rssk~rnIf~~~akrEis~~~~kv~k~~wd~s~~~~s~s~~~l~~a~~d~g~~LvSgs~DgsIrlWd~~t~-------- 101 (768)
+|.+|||++|+...+++.++.+.++....|+...+.+++++. ..+++++.|+.|++|++...
T Consensus 6 ~~~sk~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~g~i~v~~~~~~~~~~~~~~ 75 (402)
T 2aq5_A 6 VRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFM----------ALICEASGGGAFLVLPLGKTGRVDKNVP 75 (402)
T ss_dssp --CCTTTTCEEEECCGGGSEESCCBCCCCCSSCSEEECSSEE----------EEEBCCSSSCCEEEEETTCCEECCTTCC
T ss_pred cCCCCCccccCcCCChhhcEecceeecCccCCCcEEECCCeE----------EEEEEEcCCCEEEEEECccCCCCCCCCc
Confidence 689999999999999999999999988888888766653331 12334677899999998542
Q ss_pred CCCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCCCC-------eEEEEEecCCCCcEEEEEccCCC-CEEEEEeCCC
Q 004203 102 PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTG-------SCLKVLHGHRRTPWVVRFHPLNP-TIIASGSLDH 172 (768)
Q Consensus 102 ~L~gH~~~VtslafSP-DG~~LaSgS~DgtVrVWDl~tg-------~~l~~l~gH~g~V~sVafSP~dg-~lLaSgS~Dg 172 (768)
.+.+|...|++++|+| ++++|++++.|++|++||+.++ +.+..+.+|...|.+++|+| ++ ++|++++.|+
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~dg 154 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHP-TAQNVLLSAGCDN 154 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECS-SBTTEEEEEETTS
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECc-CCCCEEEEEcCCC
Confidence 4678999999999999 9999999999999999999988 66889999999999999999 65 7999999999
Q ss_pred eEEEEECCCCcEEEEe---cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEe-ecCCCC-eEEEEEccC
Q 004203 173 EVRLWNASTAECIGSR---DFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIV-LRTRRS-LRAVHFHPH 246 (768)
Q Consensus 173 tVrLWDl~sg~~i~~l---~h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~~~~~~l-~~h~~~-V~sVaFSPD 246 (768)
+|++||+++++.+..+ .|...|.+++|+|++++|++++.+ .|++||+++++... .+ ..|... +..+.|+|+
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVA---EKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE---EEECSSCSSSCCEEEECST
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceee---eeccCCCCCcceEEEEcCC
Confidence 9999999999998887 388899999999999999999955 59999999887543 34 456554 899999999
Q ss_pred CCeEEEE
Q 004203 247 AAPLLLT 253 (768)
Q Consensus 247 G~~LlaS 253 (768)
+++++++
T Consensus 232 ~~~l~~g 238 (402)
T 2aq5_A 232 GKILTTG 238 (402)
T ss_dssp TEEEEEE
T ss_pred CcEEEEe
Confidence 9866665
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.94 E-value=4.8e-25 Score=241.98 Aligned_cols=244 Identities=18% Similarity=0.239 Sum_probs=198.6
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCC
Q 004203 74 FEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR 149 (768)
Q Consensus 74 ~~a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~ 149 (768)
.......+..|++++.|+.|++||..++ .+.+|.+.|.+++|+|++++|++|+.|++|++||+++++++..+.+|.
T Consensus 113 ~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 192 (410)
T 1vyh_C 113 RVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192 (410)
T ss_dssp EEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCS
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC
Confidence 3445567889999999999999999876 467999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccC
Q 004203 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSS 227 (768)
Q Consensus 150 g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~~LatgSdd~-I~IWDl~t~~~~~~ 227 (768)
..|.+++|+| ++++|++++.|++|++||+++++++..+ .|...|.+++|+|++++|++++.++ |++||+++.+...
T Consensus 193 ~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~- 270 (410)
T 1vyh_C 193 HNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA- 270 (410)
T ss_dssp SCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-
T ss_pred CCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceee-
Confidence 9999999999 9999999999999999999999988876 5888999999999999999999654 9999998887543
Q ss_pred CeEeecCCCCeEEEEEccC--------------------CCeEEEEEe-----eCCcCCCCcceeEeecCCccc---C--
Q 004203 228 PRIVLRTRRSLRAVHFHPH--------------------AAPLLLTAE-----VNDLDSSESSLTLATSPGYWR---Y-- 277 (768)
Q Consensus 228 ~~~l~~h~~~V~sVaFSPD--------------------G~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~---~-- 277 (768)
.+..|...|.+++|+|+ |.++++++. +||++.+.....+..+.+... +
T Consensus 271 --~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~ 348 (410)
T 1vyh_C 271 --ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348 (410)
T ss_dssp --EECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred --EecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcC
Confidence 56789999999999997 555666554 788876655444443332211 0
Q ss_pred ---------CCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecC
Q 004203 278 ---------PPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 278 ---------p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d 324 (768)
....+.+|+........... ....++...+|+|++..|+....|
T Consensus 349 ~g~~l~s~s~D~~i~vwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~l~sgs~D 401 (410)
T 1vyh_C 349 GGKFILSCADDKTLRVWDYKNKRCMKTLN---AHEHFVTSLDFHKTAPYVVTGSVD 401 (410)
T ss_dssp SSSCEEEEETTTEEEEECCTTSCCCEEEE---CCSSCEEEEEECSSSSCEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEEc---CCCCcEEEEEEcCCCCEEEEEeCC
Confidence 23557888876655444332 344567789999999998875443
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.94 E-value=3.7e-25 Score=235.31 Aligned_cols=238 Identities=13% Similarity=0.163 Sum_probs=191.6
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcE
Q 004203 80 ARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~ 153 (768)
++..|++++.|++|++|+.... .+.+|...|.+++|++++.++++++.|++|++||+++++.+..+..|...+.
T Consensus 47 ~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~ 126 (321)
T 3ow8_A 47 NSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAW 126 (321)
T ss_dssp --CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCC
T ss_pred CCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEE
Confidence 4678999999999999998754 3789999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCeEe
Q 004203 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIV 231 (768)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSdd~-I~IWDl~t~~~~~~~~~l 231 (768)
+++|+| ++++|++++.|+.|++||+++++....+. +...+.+++|+|+|++|++++.++ |++||+++++... .+
T Consensus 127 ~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~---~~ 202 (321)
T 3ow8_A 127 TLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH---TL 202 (321)
T ss_dssp CEEECT-TSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE---EE
T ss_pred EEEECC-CCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE---EE
Confidence 999999 99999999999999999999998877754 677899999999999999999554 9999999887543 56
Q ss_pred ecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCccc---C-----------CCCeEEEecCCCCCC
Q 004203 232 LRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR---Y-----------PPPVICMAGAHSSSH 292 (768)
Q Consensus 232 ~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~---~-----------p~~~V~l~d~~s~d~ 292 (768)
.+|...|++++|+|++++|++++. +|+++.+.....+..+.+... + ....+.+|+..++..
T Consensus 203 ~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 203 EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 282 (321)
T ss_dssp CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEE
Confidence 778999999999999998777654 778776544433332222110 1 124567777655443
Q ss_pred CCcccccCCCCCCceEEEEecCCCEEEEEecC
Q 004203 293 PGLAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 293 ~~L~~~~~~~slpil~psFSpDG~rIv~~~~d 324 (768)
.... .....+++..+|++|+++|+....|
T Consensus 283 ~~~~---~~h~~~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 283 VHTF---FDHQDQVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp EEEE---CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEE---cCCCCcEEEEEECCCCCEEEEEeCC
Confidence 3322 2345577889999999999875443
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.94 E-value=6.1e-24 Score=221.53 Aligned_cols=240 Identities=20% Similarity=0.289 Sum_probs=192.4
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCC
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~ 151 (768)
....++..|++++.|+.|++|+...+ .+.+|...|.+++|+|++++|++++.|+.|++||+++++++..+.+|...
T Consensus 30 ~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 109 (312)
T 4ery_A 30 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 109 (312)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred EECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCC
Confidence 34467889999999999999999876 46799999999999999999999999999999999999999999999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCe
Q 004203 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPR 229 (768)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~~~~~ 229 (768)
|.++.|+| ++++|++++.|++|++||+++++++..+. |...|.+++|+|++++|++++.+ .|++||+++++... .
T Consensus 110 v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~--~ 186 (312)
T 4ery_A 110 VFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK--T 186 (312)
T ss_dssp EEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--E
T ss_pred EEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceee--E
Confidence 99999999 99999999999999999999999887764 77899999999999999999955 49999998876533 1
Q ss_pred EeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCcc-----------------cCCCCeEEEecC
Q 004203 230 IVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYW-----------------RYPPPVICMAGA 287 (768)
Q Consensus 230 ~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~-----------------~~p~~~V~l~d~ 287 (768)
....+...+..++|+|+++++++++. +|+++.++....+....... ......+.+|+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 187 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL 266 (312)
T ss_dssp ECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEET
T ss_pred EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEEC
Confidence 23345678999999999998888764 77877654333332221110 012345777776
Q ss_pred CCCCCCCcccccCCCCCCceEEEEecCCCEEEEE
Q 004203 288 HSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQ 321 (768)
Q Consensus 288 ~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~ 321 (768)
...... ....+...+++..+|+|++..++..
T Consensus 267 ~~~~~~---~~~~~h~~~v~~~~~~p~~~~l~s~ 297 (312)
T 4ery_A 267 QTKEIV---QKLQGHTDVVISTACHPTENIIASA 297 (312)
T ss_dssp TTCCEE---EEECCCSSCEEEEEECSSSSEEEEE
T ss_pred CCchhh---hhhhccCCcEEEEeecCcCCceEEE
Confidence 654432 2233445567789999999988865
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=1.6e-24 Score=229.33 Aligned_cols=185 Identities=15% Similarity=0.205 Sum_probs=159.9
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC---------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCC
Q 004203 80 ARRGLASWVEAESLHHLRPKYC---------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~---------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g 150 (768)
+...|++++.|++|++|+.... .+.+|...|.+++|+|||++|++++.|++|++||+++++.+..+.+|..
T Consensus 29 ~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~ 108 (319)
T 3frx_A 29 QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKS 108 (319)
T ss_dssp CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCC
Confidence 4578999999999999997632 4679999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCC------CCEEEEEECCe-EEEEEcCCCc
Q 004203 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHAS------GELLAVASGHK-LYIWRYNMRE 223 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPD------G~~LatgSdd~-I~IWDl~t~~ 223 (768)
.|.+++|+| ++.+|++++.|++|++||++.........|...|.+++|+|+ +..|++++.++ |++||+++.+
T Consensus 109 ~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~ 187 (319)
T 3frx_A 109 DVMSVDIDK-KASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ 187 (319)
T ss_dssp CEEEEEECT-TSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE
T ss_pred cEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch
Confidence 999999999 999999999999999999986554455678999999999995 44888888655 9999998876
Q ss_pred cccCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeE
Q 004203 224 ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTL 268 (768)
Q Consensus 224 ~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L 268 (768)
... .+.+|...|.+++|+|+|++|++++. +|++..++....+
T Consensus 188 ~~~---~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 188 IEA---DFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234 (319)
T ss_dssp EEE---EECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred hhe---eecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 533 56789999999999999998887765 7888765444443
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.94 E-value=3.1e-24 Score=225.15 Aligned_cols=237 Identities=11% Similarity=0.119 Sum_probs=183.1
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCC
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g 150 (768)
.+...++..|++++.|+.|++||..++ .+..|...|.+++|+|++++|++++.|++|++||+++++++..+.+|.+
T Consensus 19 ~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~ 98 (304)
T 2ynn_A 19 IDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD 98 (304)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCC
Confidence 344567889999999999999999876 4678999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEE-EEe-cCCCCeEEEEEcC-CCCEEEEEECC-eEEEEEcCCCcccc
Q 004203 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI-GSR-DFYRPIASIAFHA-SGELLAVASGH-KLYIWRYNMREETS 226 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i-~~l-~h~~~V~svafSP-DG~~LatgSdd-~I~IWDl~t~~~~~ 226 (768)
.|.+++|+| ++.+|++++.|++|++||++++... ..+ .|...|.+++|+| ++.+|++++.| .|++||+++.....
T Consensus 99 ~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~ 177 (304)
T 2ynn_A 99 YIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (304)
T ss_dssp CEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSE
T ss_pred cEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccc
Confidence 999999999 9999999999999999999987443 444 5889999999999 67899999955 59999998765422
Q ss_pred CCeEeecCCCCeEEEEEcc--CCCeEEEEEe-----eCCcCCCCcceeEeecCCccc---C-----------CCCeEEEe
Q 004203 227 SPRIVLRTRRSLRAVHFHP--HAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR---Y-----------PPPVICMA 285 (768)
Q Consensus 227 ~~~~l~~h~~~V~sVaFSP--DG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~---~-----------p~~~V~l~ 285 (768)
.....+...+..+.|+| +++++++++. +||++.+.....+..+.+... + ....+.+|
T Consensus 178 --~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iW 255 (304)
T 2ynn_A 178 --TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255 (304)
T ss_dssp --EEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred --eeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEE
Confidence 23345668899999987 6677776654 888876654444433322211 0 12456677
Q ss_pred cCCCCCCCCcccccCCCCCCceEEEEecCCCE
Q 004203 286 GAHSSSHPGLAEEVPLITPPFLRPSFVRDDER 317 (768)
Q Consensus 286 d~~s~d~~~L~~~~~~~slpil~psFSpDG~r 317 (768)
+..+....... ......++..+|+|+++.
T Consensus 256 d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 284 (304)
T 2ynn_A 256 NSSTYKVEKTL---NVGLERSWCIATHPTGRK 284 (304)
T ss_dssp ETTTCCEEEEE---CCSSSSEEEEEECTTCGG
T ss_pred ECCCCceeeec---cCCCccEEEEEECCCCCc
Confidence 75554332222 223345677888888764
No 9
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=1e-23 Score=224.60 Aligned_cols=240 Identities=14% Similarity=0.144 Sum_probs=181.3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-----------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecC
Q 004203 80 ARRGLASWVEAESLHHLRPKYC-----------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH 148 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~-----------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH 148 (768)
++..|++++.|++|++||.... .+.+|...|.+++|+|++.+|++++.|++|++||+++++.+..+.+|
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 6789999999999999998642 36799999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe---cCCCCeEEEEEcCCC----------CEEEEEECC-eE
Q 004203 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR---DFYRPIASIAFHASG----------ELLAVASGH-KL 214 (768)
Q Consensus 149 ~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l---~h~~~V~svafSPDG----------~~LatgSdd-~I 214 (768)
...|.+++|+| ++++|++++.|++|++||+......... .|...|.+++|+|++ .+|++++.+ .|
T Consensus 118 ~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i 196 (343)
T 2xzm_R 118 QSEVYSVAFSP-DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRL 196 (343)
T ss_dssp CSCEEEEEECS-STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEE
T ss_pred CCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEE
Confidence 99999999999 9999999999999999999854333333 477899999999987 689999854 59
Q ss_pred EEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCcc---cC---------
Q 004203 215 YIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYW---RY--------- 277 (768)
Q Consensus 215 ~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~---~~--------- 277 (768)
++||... .. ...+..|...|.+++|+|+|++|++++. +|++................ .+
T Consensus 197 ~iwd~~~-~~---~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~ 272 (343)
T 2xzm_R 197 KVWNTNF-QI---RYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAV 272 (343)
T ss_dssp EEEETTT-EE---EEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEE
T ss_pred EEEcCCC-ce---eEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEE
Confidence 9999432 22 2356779999999999999998888765 78874332221111110000 00
Q ss_pred -CCCeEEEecCCCCCCCCccccc----------CCCCCCceEEEEecCCCEEEEEecC
Q 004203 278 -PPPVICMAGAHSSSHPGLAEEV----------PLITPPFLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 278 -p~~~V~l~d~~s~d~~~L~~~~----------~~~slpil~psFSpDG~rIv~~~~d 324 (768)
....+.+|+........+.... .+....+...+|+|||+.|+....|
T Consensus 273 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D 330 (343)
T 2xzm_R 273 GTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD 330 (343)
T ss_dssp EESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT
T ss_pred ECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCC
Confidence 1234666766554433211111 1233456789999999999986443
No 10
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.93 E-value=6.6e-23 Score=252.83 Aligned_cols=249 Identities=17% Similarity=0.222 Sum_probs=187.8
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecC
Q 004203 73 IFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH 148 (768)
Q Consensus 73 l~~a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH 148 (768)
...+...++..+++++.|+.|++||..++ .+.+|...|.+++|+|||++|++++.|++|++||+.+++.+..+.+|
T Consensus 619 ~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 698 (1249)
T 3sfz_A 619 YHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEH 698 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCC
Confidence 34455678899999999999999999887 47899999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEccC-CCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccc
Q 004203 149 RRTPWVVRFHPL-NPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREET 225 (768)
Q Consensus 149 ~g~V~sVafSP~-dg~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~ 225 (768)
...|.+++|+|+ ++.++++++.|+.|++||++++++...+ .|...|.+++|+|++++|++++.+ .|++||+.++...
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~ 778 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANER 778 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEE
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCccc
Confidence 999999999994 3458999999999999999999988775 588999999999999999999955 5999999887543
Q ss_pred cCCe----------EeecCCCCeEEEEEccCCCeEEEEEe----eCCcCCCCcceeEee-cCCcc--------------c
Q 004203 226 SSPR----------IVLRTRRSLRAVHFHPHAAPLLLTAE----VNDLDSSESSLTLAT-SPGYW--------------R 276 (768)
Q Consensus 226 ~~~~----------~l~~h~~~V~sVaFSPDG~~LlaS~s----vwdl~sg~~~~~L~t-~~G~~--------------~ 276 (768)
.... ........+.+++|+|+|+.+++++. +|++..+.....+.. ..+.. .
T Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 858 (1249)
T 3sfz_A 779 KSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIA 858 (1249)
T ss_dssp EEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEE
T ss_pred ceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEE
Confidence 2100 00112346788888999887777654 666655443333221 11110 0
Q ss_pred CCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecC
Q 004203 277 YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 277 ~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d 324 (768)
.....+.+|+..++... ....+...++....|+|||+.++....+
T Consensus 859 ~~dg~v~vwd~~~~~~~---~~~~~h~~~v~~v~~spdg~~l~s~s~d 903 (1249)
T 3sfz_A 859 LSQYCVELWNIDSRLKV---ADCRGHLSWVHGVMFSPDGSSFLTASDD 903 (1249)
T ss_dssp CSSSCEEEEETTTTEEE---EEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eCCCeEEEEEcCCCcee---eecCCCccceEEEEECCCCCEEEEEeCC
Confidence 12245667775544322 2223445567788899999888876544
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.93 E-value=1.7e-23 Score=222.97 Aligned_cols=239 Identities=15% Similarity=0.153 Sum_probs=189.1
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC----eEEEEEec
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG----SCLKVLHG 147 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg----~~l~~l~g 147 (768)
....++..|++++.|+.|++||..+. .+..|...|.+++|+|+|++|++++.|+.|++||+.++ +....+.+
T Consensus 62 ~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~ 141 (340)
T 1got_B 62 HWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAG 141 (340)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecC
Confidence 34467889999999999999998876 35689999999999999999999999999999999875 35677889
Q ss_pred CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccc
Q 004203 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGH-KLYIWRYNMREET 225 (768)
Q Consensus 148 H~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~ 225 (768)
|.+.|.++.|++ ++ .+++++.|++|++||+++++++..+. |...|.+++|+|++++|++++.+ .|++||++++...
T Consensus 142 h~~~v~~~~~~~-~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~ 219 (340)
T 1got_B 142 HTGYLSCCRFLD-DN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR 219 (340)
T ss_dssp CSSCEEEEEEEE-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEE
T ss_pred CCccEEEEEECC-CC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeE
Confidence 999999999998 55 48899999999999999999888764 88899999999999999999955 5999999988654
Q ss_pred cCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCcc------c-----------CCCCeEE
Q 004203 226 SSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYW------R-----------YPPPVIC 283 (768)
Q Consensus 226 ~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~------~-----------~p~~~V~ 283 (768)
. .+..|...|.+++|+|+++++++++. +||++.......+. ..++. . .....+.
T Consensus 220 ~---~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~ 295 (340)
T 1got_B 220 Q---TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCN 295 (340)
T ss_dssp E---EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CTTCCSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred E---EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc-cCCcccceEEEEECCCCCEEEEECCCCeEE
Confidence 3 56779999999999999998887765 77777543322221 11110 0 1224567
Q ss_pred EecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEec
Q 004203 284 MAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHT 323 (768)
Q Consensus 284 l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~ 323 (768)
+|+......... ..+...++...+|+|||..|+....
T Consensus 296 vwd~~~~~~~~~---~~~h~~~v~~~~~s~dg~~l~s~s~ 332 (340)
T 1got_B 296 VWDALKADRAGV---LAGHDNRVSCLGVTDDGMAVATGSW 332 (340)
T ss_dssp EEETTTCCEEEE---EECCSSCEEEEEECTTSSCEEEEET
T ss_pred EEEcccCcEeeE---eecCCCcEEEEEEcCCCCEEEEEcC
Confidence 777655443322 2345567788999999999987543
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.93 E-value=1.5e-23 Score=224.26 Aligned_cols=179 Identities=22% Similarity=0.256 Sum_probs=154.4
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCC-------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC--eEEEEE
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYCP-------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG--SCLKVL 145 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~~-------L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg--~~l~~l 145 (768)
.+...++..|++++.|+.|++||..... ..+|...|.+++|+|||++|++++.|++|++||+.++ +++..+
T Consensus 22 l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 101 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL 101 (345)
T ss_dssp EEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEc
Confidence 4455678899999999999999987652 3689999999999999999999999999999999876 457889
Q ss_pred ecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE---EEEe-cCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcC
Q 004203 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC---IGSR-DFYRPIASIAFHASGELLAVASGHK-LYIWRYN 220 (768)
Q Consensus 146 ~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~---i~~l-~h~~~V~svafSPDG~~LatgSdd~-I~IWDl~ 220 (768)
.+|.+.|.+++|+| ++++|++++.|++|++||+++++. +..+ .|...|.+++|+|++++|++++.++ |++||++
T Consensus 102 ~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~ 180 (345)
T 3fm0_A 102 EGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE 180 (345)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred cCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEec
Confidence 99999999999999 999999999999999999987643 3333 5888999999999999999999655 9999998
Q ss_pred CCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 221 MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 221 t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
..+... ...+.+|...|++++|+|+|++|++++.
T Consensus 181 ~~~~~~-~~~~~~h~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 181 EDDWVC-CATLEGHESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp TTEEEE-EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCEEE-EEEecCCCCceEEEEECCCCCEEEEEeC
Confidence 765322 2356789999999999999998887765
No 13
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=3e-23 Score=216.92 Aligned_cols=223 Identities=14% Similarity=0.152 Sum_probs=168.3
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEeCCCCe--EEEEE
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTGS--CLKVL 145 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSP--DG~~LaSgS~DgtVrVWDl~tg~--~l~~l 145 (768)
+...++..|++++.|+.|++|+.... ++.+|.+.|.+++|++ ++++|++++.|++|++||+++++ .+..+
T Consensus 16 ~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~ 95 (297)
T 2pm7_B 16 VMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVH 95 (297)
T ss_dssp EECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEE
T ss_pred EECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEe
Confidence 34467889999999999999998642 4789999999999987 48999999999999999999874 56778
Q ss_pred ecCCCCcEEEEEccCC--CCEEEEEeCCCeEEEEECCCCcE---EEEecCCCCeEEEEEcCC-------------CCEEE
Q 004203 146 HGHRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTAEC---IGSRDFYRPIASIAFHAS-------------GELLA 207 (768)
Q Consensus 146 ~gH~g~V~sVafSP~d--g~lLaSgS~DgtVrLWDl~sg~~---i~~l~h~~~V~svafSPD-------------G~~La 207 (768)
.+|...|.+++|+| + +.+|++++.|++|++||++++.. .....|...|.+++|+|+ +++|+
T Consensus 96 ~~h~~~v~~v~~~p-~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~ 174 (297)
T 2pm7_B 96 AVHSASVNSVQWAP-HEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFV 174 (297)
T ss_dssp CCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEE
T ss_pred ecCCCceeEEEeCc-CCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEE
Confidence 89999999999999 5 78999999999999999987632 233468889999999997 57899
Q ss_pred EEECC-eEEEEEcCCCcccc-CCeEeecCCCCeEEEEEccCC---CeEEEEEe-----eCCcCCCCcceeEeecCCcccC
Q 004203 208 VASGH-KLYIWRYNMREETS-SPRIVLRTRRSLRAVHFHPHA---APLLLTAE-----VNDLDSSESSLTLATSPGYWRY 277 (768)
Q Consensus 208 tgSdd-~I~IWDl~t~~~~~-~~~~l~~h~~~V~sVaFSPDG---~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~~ 277 (768)
+++.| .|++||+++..... ....+.+|...|++++|+|++ ++|++++. +|+++........
T Consensus 175 sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~--------- 245 (297)
T 2pm7_B 175 TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKK--------- 245 (297)
T ss_dssp EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEE---------
T ss_pred EEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccce---------
Confidence 99955 59999998765221 122466799999999999996 55555443 3443321100000
Q ss_pred CCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecCC
Q 004203 278 PPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEH 325 (768)
Q Consensus 278 p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d~ 325 (768)
. +. ........++..+|+|||+.|+....|.
T Consensus 246 -----~-----------~~-~~~~~~~~v~~~~~s~~g~~las~~~D~ 276 (297)
T 2pm7_B 246 -----T-----------LL-KEEKFPDVLWRASWSLSGNVLALSGGDN 276 (297)
T ss_dssp -----E-----------ES-SSSCCSSCEEEEEECSSSCCEEEEETTS
T ss_pred -----e-----------ee-ecccCCCcEEEEEECCCCCEEEEEcCCC
Confidence 0 00 0011234567899999999998865543
No 14
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.93 E-value=1.4e-23 Score=220.24 Aligned_cols=190 Identities=17% Similarity=0.243 Sum_probs=162.2
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-eEEEEEecCCC
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG-SCLKVLHGHRR 150 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg-~~l~~l~gH~g 150 (768)
....++..|++++.|+.|++||..++ .+.+|...|.+++|+|++++|++++.|++|++||++++ .....+.+|..
T Consensus 62 ~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~ 141 (304)
T 2ynn_A 62 KFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH 141 (304)
T ss_dssp EEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS
T ss_pred EEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC
Confidence 34457789999999999999999877 46799999999999999999999999999999999887 55678899999
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe--cCCCCeEEEEEcC--CCCEEEEEECCe-EEEEEcCCCccc
Q 004203 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFHA--SGELLAVASGHK-LYIWRYNMREET 225 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l--~h~~~V~svafSP--DG~~LatgSdd~-I~IWDl~t~~~~ 225 (768)
.|.+++|+|.++.+|++++.|++|++||+++++....+ .+...+..++|+| ++++|++++.++ |++||+++++..
T Consensus 142 ~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~ 221 (304)
T 2ynn_A 142 FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (304)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc
Confidence 99999999977899999999999999999887765544 4667899999987 778999999654 999999988754
Q ss_pred cCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeE
Q 004203 226 SSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTL 268 (768)
Q Consensus 226 ~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L 268 (768)
. .+.+|...|.+++|+|++++|++++. +|++..++....+
T Consensus 222 ~---~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 222 A---TLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (304)
T ss_dssp E---EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred e---eeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeec
Confidence 4 67789999999999999998777765 7777765443333
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.92 E-value=1.3e-23 Score=226.65 Aligned_cols=172 Identities=15% Similarity=0.164 Sum_probs=143.3
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC--------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCc
Q 004203 81 RRGLASWVEAESLHHLRPKYCP--------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTP 152 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~--------L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V 152 (768)
...+++++.|+.|++||+.+++ +.+|...|++++|+|||++|++++.|++|++||+++++++..+++|...|
T Consensus 105 d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v 184 (357)
T 4g56_B 105 EKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEV 184 (357)
T ss_dssp TTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE
Confidence 4567788999999999997652 34799999999999999999999999999999999999999999999999
Q ss_pred EEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe---cCCCCeEEEEEcCCC-CEEEEEECC-eEEEEEcCCCccccC
Q 004203 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR---DFYRPIASIAFHASG-ELLAVASGH-KLYIWRYNMREETSS 227 (768)
Q Consensus 153 ~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l---~h~~~V~svafSPDG-~~LatgSdd-~I~IWDl~t~~~~~~ 227 (768)
++++|+|++..++++++.|++|++||++++++...+ .+...+.+++|+|++ .+|++++.+ .|++||+++++...
T Consensus 185 ~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~- 263 (357)
T 4g56_B 185 NCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQ- 263 (357)
T ss_dssp EEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCE-
T ss_pred EEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeE-
Confidence 999999955568999999999999999998876654 356789999999985 578888855 59999999887543
Q ss_pred CeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 228 PRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 228 ~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
.+..|...|++++|+|++..++++++
T Consensus 264 --~~~~~~~~v~~l~~sp~~~~~lasgs 289 (357)
T 4g56_B 264 --TSAVHSQNITGLAYSYHSSPFLASIS 289 (357)
T ss_dssp --EECCCSSCEEEEEECSSSSCCEEEEE
T ss_pred --EEeccceeEEEEEEcCCCCCEEEEEe
Confidence 67788999999999999865555443
No 16
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.92 E-value=3.7e-23 Score=226.97 Aligned_cols=190 Identities=25% Similarity=0.354 Sum_probs=168.7
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCC
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~ 151 (768)
+...++..|++++.|++|++||..+. .+.+|...|.+++|+|++++|++++.|++|++||+++++++..+.+|...
T Consensus 157 ~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~ 236 (410)
T 1vyh_C 157 SFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236 (410)
T ss_dssp EECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCcc
Confidence 34457789999999999999999875 57899999999999999999999999999999999999999999999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCC--------------------CCEEEEEE
Q 004203 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHAS--------------------GELLAVAS 210 (768)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPD--------------------G~~LatgS 210 (768)
|.++.|+| ++.+|++++.|++|++||++++++...+ .|...|.+++|+|+ |.+|++++
T Consensus 237 v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs 315 (410)
T 1vyh_C 237 VRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315 (410)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE
T ss_pred EEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe
Confidence 99999999 9999999999999999999999888776 58889999999996 67899999
Q ss_pred CCe-EEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEe
Q 004203 211 GHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLA 269 (768)
Q Consensus 211 dd~-I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~ 269 (768)
.++ |++||++++.... .+.+|...|++++|+|+|++|++++. +|++..++....+.
T Consensus 316 ~D~~i~iwd~~~~~~~~---~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~ 377 (410)
T 1vyh_C 316 RDKTIKMWDVSTGMCLM---TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377 (410)
T ss_dssp TTSEEEEEETTTTEEEE---EEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE
T ss_pred CCCeEEEEECCCCceEE---EEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 655 9999999887543 67789999999999999998888765 88887665555554
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.92 E-value=1.3e-23 Score=223.94 Aligned_cols=171 Identities=16% Similarity=0.244 Sum_probs=155.3
Q ss_pred CCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEE
Q 004203 81 RRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVR 156 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVa 156 (768)
...+++++.|+.|++||+.++ .+.+|...|.+++|+|++++|++++.|++|++||+++++++..+.+|...|.+++
T Consensus 154 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~ 233 (340)
T 1got_B 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233 (340)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEE
T ss_pred CCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEE
Confidence 345899999999999999876 4789999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC---CCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCeEee
Q 004203 157 FHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY---RPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVL 232 (768)
Q Consensus 157 fSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~---~~V~svafSPDG~~LatgSdd~-I~IWDl~t~~~~~~~~~l~ 232 (768)
|+| ++++|++++.|++|++||+++++.+..+.+. ..|.+++|+|+|++|+++++++ |++||+.+.+... .+.
T Consensus 234 ~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~---~~~ 309 (340)
T 1got_B 234 FFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG---VLA 309 (340)
T ss_dssp ECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE---EEE
T ss_pred EcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEee---Eee
Confidence 999 9999999999999999999999888777654 3799999999999999999655 9999998877543 677
Q ss_pred cCCCCeEEEEEccCCCeEEEEEe
Q 004203 233 RTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 233 ~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
+|...|.+++|+|+|++|++++.
T Consensus 310 ~h~~~v~~~~~s~dg~~l~s~s~ 332 (340)
T 1got_B 310 GHDNRVSCLGVTDDGMAVATGSW 332 (340)
T ss_dssp CCSSCEEEEEECTTSSCEEEEET
T ss_pred cCCCcEEEEEEcCCCCEEEEEcC
Confidence 89999999999999998887764
No 18
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.92 E-value=5e-23 Score=221.55 Aligned_cols=214 Identities=15% Similarity=0.182 Sum_probs=172.2
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC----------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEE
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYC----------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVL 145 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~----------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l 145 (768)
+...++..+++++.|+.+++|+.... .+.+|...|.+++|+|+++.|++++.|++|++||+++++.+..+
T Consensus 113 ~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~ 192 (354)
T 2pbi_B 113 AYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF 192 (354)
T ss_dssp EECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Confidence 34457788899999999999987543 24579999999999999999999999999999999999999999
Q ss_pred ecCCCCcEEEEEccC-CCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCC
Q 004203 146 HGHRRTPWVVRFHPL-NPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYNMR 222 (768)
Q Consensus 146 ~gH~g~V~sVafSP~-dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSdd~-I~IWDl~t~ 222 (768)
.+|...|.++.|+|. ++++|++++.|++|++||+++++++..+. |...|.+++|+|++.+|++++.|+ |++||++..
T Consensus 193 ~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 193 HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred cCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 999999999999884 46899999999999999999999988864 888999999999999999999655 999999887
Q ss_pred ccccCCeEee--cCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCc
Q 004203 223 EETSSPRIVL--RTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGL 295 (768)
Q Consensus 223 ~~~~~~~~l~--~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L 295 (768)
.... ... .+...+.+++|+|+|+++++++. +|++..+.. +....
T Consensus 273 ~~~~---~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~---~~~l~----------------------- 323 (354)
T 2pbi_B 273 REVA---IYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR---VSILF----------------------- 323 (354)
T ss_dssp EEEE---EECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE---EEEEC-----------------------
T ss_pred cEEE---EEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCce---EEEEE-----------------------
Confidence 6432 222 22357899999999998777664 444443221 11111
Q ss_pred ccccCCCCCCceEEEEecCCCEEEEEec
Q 004203 296 AEEVPLITPPFLRPSFVRDDERISLQHT 323 (768)
Q Consensus 296 ~~~~~~~slpil~psFSpDG~rIv~~~~ 323 (768)
+...++...+|+|||+.|+....
T Consensus 324 -----~h~~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 324 -----GHENRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp -----CCSSCEEEEEECTTSSCEEEEET
T ss_pred -----CCCCcEEEEEECCCCCEEEEEcC
Confidence 22335667899999999987543
No 19
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.92 E-value=2.3e-23 Score=221.48 Aligned_cols=187 Identities=18% Similarity=0.235 Sum_probs=165.5
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCC
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~ 151 (768)
.....+..+++++.|+.|++||+.++ .+..|...+.+++|+||+++|++++.|+.|++||+++++....+..|...
T Consensus 87 ~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~ 166 (321)
T 3ow8_A 87 DISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKF 166 (321)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSC
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCce
Confidence 34456778999999999999999876 35688889999999999999999999999999999999999999999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCe
Q 004203 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPR 229 (768)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSdd~-I~IWDl~t~~~~~~~~ 229 (768)
|.+++|+| ++++|++++.|+.|++||+++++.+..+. |...|.+++|+|++++|++++.++ |++||+++.+...
T Consensus 167 v~~~~~sp-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~--- 242 (321)
T 3ow8_A 167 ILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG--- 242 (321)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEE---
T ss_pred EEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeE---
Confidence 99999999 99999999999999999999999888775 788999999999999999999655 9999999877543
Q ss_pred EeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcce
Q 004203 230 IVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSL 266 (768)
Q Consensus 230 ~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~ 266 (768)
.+.+|...|.+++|+|++++|++++. +|++..++...
T Consensus 243 ~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 243 TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 67789999999999999998887765 77777554333
No 20
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.92 E-value=9.8e-24 Score=227.77 Aligned_cols=177 Identities=15% Similarity=0.153 Sum_probs=151.7
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeCCCCeEEEEEe--c
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGK-TLASTHGDHTVKIIDCQTGSCLKVLH--G 147 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~-~LaSgS~DgtVrVWDl~tg~~l~~l~--g 147 (768)
.+...++..|++++.|+.|++||+.++ .+.+|...|++++|++++. +|++++.|++|++||+++++....+. .
T Consensus 133 v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 212 (344)
T 4gqb_B 133 VSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSA 212 (344)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC---
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecce
Confidence 334567899999999999999999887 4789999999999999885 78999999999999999999887774 4
Q ss_pred CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCC-CEEEEEECC-eEEEEEcCCCcc
Q 004203 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASG-ELLAVASGH-KLYIWRYNMREE 224 (768)
Q Consensus 148 H~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG-~~LatgSdd-~I~IWDl~t~~~ 224 (768)
|...+.+++|+|+++++|++|+.|++|+|||+++++++..+ .|...|.+++|+|++ ++|++++.| .|+|||+.+++.
T Consensus 213 ~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 213 PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp -CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 55678999999977889999999999999999999988776 488999999999998 578889855 599999988764
Q ss_pred ccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 225 TSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 225 ~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
....+|...|++++|+|+++.++++++
T Consensus 293 ----~~~~~H~~~V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 293 ----FRSQAHRDFVRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp ----EEECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred ----EEEcCCCCCEEEEEEeCCCCeEEEEEc
Confidence 346789999999999999998877665
No 21
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=4.4e-23 Score=222.39 Aligned_cols=245 Identities=18% Similarity=0.152 Sum_probs=184.8
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCC
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~ 151 (768)
....++..|++++.|+.|++||+.+. .+.+|...|++++|+|++++|++++.|++|++||+++++.+..+.+|.+.
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~ 183 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRAT 183 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSC
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCc
Confidence 34557889999999999999999876 36799999999999999999999999999999999999999999999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec----CCCCeE---------------------EEEEcCCCCEE
Q 004203 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD----FYRPIA---------------------SIAFHASGELL 206 (768)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~----h~~~V~---------------------svafSPDG~~L 206 (768)
|.+++|+| ++++|++++.|++|++||+++++.+..+. +...+. +++|+|++++|
T Consensus 184 v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 262 (420)
T 3vl1_A 184 VTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYV 262 (420)
T ss_dssp EEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEE
T ss_pred EEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEE
Confidence 99999999 99999999999999999999999888764 333444 45557899999
Q ss_pred EEEECCe-EEEEEcCCCccccCCeEeecCCCCeEEEEEccCCC-eEEEEEe-----eCCcCCCCc-ceeEeecCCc-c--
Q 004203 207 AVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAA-PLLLTAE-----VNDLDSSES-SLTLATSPGY-W-- 275 (768)
Q Consensus 207 atgSdd~-I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~-~LlaS~s-----vwdl~sg~~-~~~L~t~~G~-~-- 275 (768)
++++.++ |++||+++.+... .....|...|.+++|+|+++ ++++++. +|+++.+.. ...+....+. .
T Consensus 263 ~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~ 340 (420)
T 3vl1_A 263 IAGHVSGVITVHNVFSKEQTI--QLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINN 340 (420)
T ss_dssp EEEETTSCEEEEETTTCCEEE--EECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEE
T ss_pred EEEcCCCeEEEEECCCCceeE--EcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceE
Confidence 9999654 9999999876533 22335788999999999999 6666554 888886644 2333321111 0
Q ss_pred --------c---CCCCeEEEecCCCCCCCCcc------cccCCCCCCceEEEEecCCC---EEEEEec
Q 004203 276 --------R---YPPPVICMAGAHSSSHPGLA------EEVPLITPPFLRPSFVRDDE---RISLQHT 323 (768)
Q Consensus 276 --------~---~p~~~V~l~d~~s~d~~~L~------~~~~~~slpil~psFSpDG~---rIv~~~~ 323 (768)
- .....+.+|+...+...... .........+...+|+||++ +|++...
T Consensus 341 ~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~ 408 (420)
T 3vl1_A 341 VYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGK 408 (420)
T ss_dssp EEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEET
T ss_pred EEeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcC
Confidence 0 12345667775543222111 11112234555789999999 7776543
No 22
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.91 E-value=1.6e-23 Score=226.89 Aligned_cols=248 Identities=13% Similarity=0.163 Sum_probs=190.0
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe-------EEE
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS-------CLK 143 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~-------~l~ 143 (768)
.....++..|++++.|++|++||..++ .+..|...|.+++|+|+|++|++++.|+.|++||+.+.. ...
T Consensus 72 ~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~ 151 (380)
T 3iz6_a 72 LDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSR 151 (380)
T ss_dssp EEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCcccee
Confidence 344567889999999999999999876 467899999999999999999999999999999987532 345
Q ss_pred EEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe------cCCCCeEEEEEcC-CCCEEEEEECC-eEE
Q 004203 144 VLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR------DFYRPIASIAFHA-SGELLAVASGH-KLY 215 (768)
Q Consensus 144 ~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l------~h~~~V~svafSP-DG~~LatgSdd-~I~ 215 (768)
.+.+|.+.|.++.|+|+++..|++++.|++|++||+++++.+..+ .|...|.+++|++ ++.+|++++.| .|+
T Consensus 152 ~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~ 231 (380)
T 3iz6_a 152 VLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVR 231 (380)
T ss_dssp BCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEE
T ss_pred eccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEE
Confidence 678999999999999966778999999999999999999988765 4778999999987 88899999955 499
Q ss_pred EEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCC-----------------
Q 004203 216 IWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPG----------------- 273 (768)
Q Consensus 216 IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G----------------- 273 (768)
+||++.... ....+.+|...|++++|+|+|++|++++. +||++.+.....+.....
T Consensus 232 ~wd~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 309 (380)
T 3iz6_a 232 LWDLRITSR--AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSIS 309 (380)
T ss_dssp EEETTTTCC--CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSS
T ss_pred EEECCCCCc--ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCC
Confidence 999985432 23467789999999999999998887765 788876544333322111
Q ss_pred -cc---cCCCCeEEEecCCCCCCCCcc-cccCCCCCCceEEEEecCCCEEEEEecC
Q 004203 274 -YW---RYPPPVICMAGAHSSSHPGLA-EEVPLITPPFLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 274 -~~---~~p~~~V~l~d~~s~d~~~L~-~~~~~~slpil~psFSpDG~rIv~~~~d 324 (768)
.. ......+.+|+...+...... ........++...+|+|||+.|+....|
T Consensus 310 g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 365 (380)
T 3iz6_a 310 GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD 365 (380)
T ss_dssp SSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT
T ss_pred CCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC
Confidence 00 012345667775544332211 1113345567789999999999876443
No 23
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.91 E-value=5.1e-23 Score=226.66 Aligned_cols=188 Identities=17% Similarity=0.152 Sum_probs=154.3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEecC--CC
Q 004203 80 ARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVLHGH--RR 150 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSP-DG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH--~g 150 (768)
+...|++|+.||.|++||+.+. ++.+|.+.|++++|+| |+++|++++.|++|++||++++........+ ..
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~ 210 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINI 210 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSC
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCc
Confidence 5678999999999999999765 3568999999999998 7899999999999999999877654444433 34
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCC-EEEEEECC-eEEEEEcCCCccccCC
Q 004203 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGE-LLAVASGH-KLYIWRYNMREETSSP 228 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~-~LatgSdd-~I~IWDl~t~~~~~~~ 228 (768)
.+.+++|+| ++.+|++|+.|+.|++||++.........|...|.+++|+|++. +|++++.| .|++||+++.+.....
T Consensus 211 ~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~ 289 (435)
T 4e54_B 211 WFCSLDVSA-SSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF 289 (435)
T ss_dssp CCCCEEEET-TTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC
T ss_pred cEEEEEECC-CCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceE
Confidence 577899999 99999999999999999997654444456899999999999987 67788754 5999999987665434
Q ss_pred eEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeE
Q 004203 229 RIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTL 268 (768)
Q Consensus 229 ~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L 268 (768)
.....|...|++++|+|+|++|++++. +|++..++....+
T Consensus 290 ~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 290 LYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGL 334 (435)
T ss_dssp SBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEE
T ss_pred EEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEE
Confidence 445678999999999999998888775 7888776655444
No 24
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.2e-22 Score=213.82 Aligned_cols=176 Identities=20% Similarity=0.265 Sum_probs=142.2
Q ss_pred EEEEEeCCCeEEEEeCCCCC------C-CC-CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-------CeEEEEEec
Q 004203 83 GLASWVEAESLHHLRPKYCP------L-SP-PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT-------GSCLKVLHG 147 (768)
Q Consensus 83 ~LvSgs~DgsIrlWd~~t~~------L-~g-H~~~VtslafSPDG~~LaSgS~DgtVrVWDl~t-------g~~l~~l~g 147 (768)
.|++++.|+.|++|++.... + .+ |...|.+++|+|++++|++++.|++|++||++. .+.+..+.+
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 105 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG 105 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC
Confidence 89999999999999998641 2 34 999999999999999999999999999999853 456788899
Q ss_pred CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCC----cEEEEe-cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCC
Q 004203 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA----ECIGSR-DFYRPIASIAFHASGELLAVASGH-KLYIWRYNM 221 (768)
Q Consensus 148 H~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg----~~i~~l-~h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t 221 (768)
|.+.|.+++|+| ++++|++++.|++|++||++.. +++..+ .|...|.+++|+|++++|++++.| .|++||..+
T Consensus 106 h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 106 HENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp ---CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEET
T ss_pred CCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 999999999999 9999999999999999999532 345554 588899999999999999999955 599999977
Q ss_pred CccccCCeEeecCCCCeEEEEEccC--CCeEEEEEe-----eCCcC
Q 004203 222 REETSSPRIVLRTRRSLRAVHFHPH--AAPLLLTAE-----VNDLD 260 (768)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPD--G~~LlaS~s-----vwdl~ 260 (768)
.... ....+.+|...|.++.|+|+ +.++++++. +|++.
T Consensus 185 ~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 185 DDWE-CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp TEEE-EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred CCee-EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence 6321 12356789999999999999 555666554 66664
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.91 E-value=5.5e-22 Score=205.26 Aligned_cols=218 Identities=18% Similarity=0.182 Sum_probs=178.4
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecC
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH 148 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH 148 (768)
.....++..|++++.|+.|++||....+ +..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+|
T Consensus 103 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~ 182 (337)
T 1gxr_A 103 CKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 182 (337)
T ss_dssp EEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecc
Confidence 3445577889999999999999998763 5689999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCccccC
Q 004203 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG-HKLYIWRYNMREETSS 227 (768)
Q Consensus 149 ~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSd-d~I~IWDl~t~~~~~~ 227 (768)
...|.+++|+| +++++++++.|+.|++||+++++.+..+.+...+.+++|+|++++|++++. +.|++||+++.+.
T Consensus 183 ~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~--- 258 (337)
T 1gxr_A 183 TDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK--- 258 (337)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE---
T ss_pred cCceEEEEECC-CCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe---
Confidence 99999999999 999999999999999999999999998999999999999999999999995 4599999988754
Q ss_pred CeEeecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCce
Q 004203 228 PRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFL 307 (768)
Q Consensus 228 ~~~l~~h~~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil 307 (768)
.....|...|.+++|+|+++++++++... .+.+|+.......... ....++.
T Consensus 259 -~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----------------------~i~~~~~~~~~~~~~~----~~~~~v~ 310 (337)
T 1gxr_A 259 -YQLHLHESCVLSLKFAYCGKWFVSTGKDN-----------------------LLNAWRTPYGASIFQS----KESSSVL 310 (337)
T ss_dssp -EEECCCSSCEEEEEECTTSSEEEEEETTS-----------------------EEEEEETTTCCEEEEE----ECSSCEE
T ss_pred -EEEcCCccceeEEEECCCCCEEEEecCCC-----------------------cEEEEECCCCeEEEEe----cCCCcEE
Confidence 34667889999999999999887765411 1222222221111000 0123466
Q ss_pred EEEEecCCCEEEEEecC
Q 004203 308 RPSFVRDDERISLQHTE 324 (768)
Q Consensus 308 ~psFSpDG~rIv~~~~d 324 (768)
...|++|++.|+....+
T Consensus 311 ~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 311 SCDISVDDKYIVTGSGD 327 (337)
T ss_dssp EEEECTTSCEEEEEETT
T ss_pred EEEECCCCCEEEEecCC
Confidence 78999999998876543
No 26
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.91 E-value=1.9e-22 Score=217.04 Aligned_cols=175 Identities=17% Similarity=0.245 Sum_probs=155.8
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCC
Q 004203 77 GRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (768)
Q Consensus 77 ~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSP--DG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g 150 (768)
...++..|++++.|++|++||++++ .+.+|...|.+++|+| +|++|++++.|++|++||+++++++..+.+|..
T Consensus 162 ~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~ 241 (354)
T 2pbi_B 162 FTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES 241 (354)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC
Confidence 3456778999999999999999877 4679999999999988 578999999999999999999999999999999
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecC---CCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCcccc
Q 004203 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF---YRPIASIAFHASGELLAVASGH-KLYIWRYNMREETS 226 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h---~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~~ 226 (768)
.|.+++|+| ++++|++++.|++|++||+++++.+..+.. ...+.+++|+|+|++|++++.+ .|++||+.+++...
T Consensus 242 ~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~ 320 (354)
T 2pbi_B 242 DVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVS 320 (354)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred CeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEE
Confidence 999999999 999999999999999999999887776643 3478999999999999999965 59999998877543
Q ss_pred CCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 227 SPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 227 ~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
.+.+|...|.+++|+|||++|++++.
T Consensus 321 ---~l~~h~~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 321 ---ILFGHENRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp ---EECCCSSCEEEEEECTTSSCEEEEET
T ss_pred ---EEECCCCcEEEEEECCCCCEEEEEcC
Confidence 56789999999999999998887764
No 27
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.91 E-value=8.6e-22 Score=210.87 Aligned_cols=242 Identities=12% Similarity=0.082 Sum_probs=183.3
Q ss_pred EEecCC-CEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEec
Q 004203 76 AGRDAR-RGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (768)
Q Consensus 76 a~~d~g-~~LvSgs~DgsIrlWd~~t~~------L~gH~~~VtslafSP-DG~~LaSgS~DgtVrVWDl~tg~~l~~l~g 147 (768)
+...++ ..|++++.|+.|++||..+.+ +.+|...|.+++|+| ++++|++++.|+.|++||+++ +.+..+..
T Consensus 80 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~ 158 (383)
T 3ei3_B 80 EWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAK 158 (383)
T ss_dssp EECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEEC
T ss_pred EECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEec
Confidence 334455 899999999999999998662 347999999999999 789999999999999999986 55566654
Q ss_pred CC---CCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE-ecCCCCeEEEEEcCCCC-EEEEEECC-eEEEEEcCC
Q 004203 148 HR---RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-RDFYRPIASIAFHASGE-LLAVASGH-KLYIWRYNM 221 (768)
Q Consensus 148 H~---g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~-l~h~~~V~svafSPDG~-~LatgSdd-~I~IWDl~t 221 (768)
+. ..|.+++|+| ++++|++++.|+.|++||++ ++.+.. ..|...|.+++|+|+++ +|++++.+ .|++||+++
T Consensus 159 ~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 159 TDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp CCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred cCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 44 7899999999 99999999999999999995 555555 45889999999999999 89999855 599999998
Q ss_pred CccccCCeEeecCCCCeEEEEEcc-CCCeEEEEEe-----eCCcCCCCcceeEeecCCcc--------------------
Q 004203 222 REETSSPRIVLRTRRSLRAVHFHP-HAAPLLLTAE-----VNDLDSSESSLTLATSPGYW-------------------- 275 (768)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSP-DG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~-------------------- 275 (768)
.+..........|...|.+++|+| ++++|++++. +|+++.++....+.......
T Consensus 237 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 316 (383)
T 3ei3_B 237 IKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVA 316 (383)
T ss_dssp CCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEE
T ss_pred CCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEE
Confidence 543323344557999999999999 9998887764 88888766655544321100
Q ss_pred cC---------CCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEE
Q 004203 276 RY---------PPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQ 321 (768)
Q Consensus 276 ~~---------p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~ 321 (768)
.+ ....+.+|+..++.......... ....+...+|+||++.|+..
T Consensus 317 ~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~-~~~~~~~~~~s~~g~~l~s~ 370 (383)
T 3ei3_B 317 GRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPN-AAGIISLNKFSPTGDVLASG 370 (383)
T ss_dssp ECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTT-BCSCCCEEEECTTSSEEEEE
T ss_pred EecCCcccccCCCCeEEEEecCCCceeeeecCCC-CCceEEEEEEecCccEEEEe
Confidence 00 23568888876655433332211 11223356999999998875
No 28
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.91 E-value=4.3e-22 Score=216.66 Aligned_cols=188 Identities=21% Similarity=0.262 Sum_probs=157.1
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCC
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g 150 (768)
.+...++..|++++.|+.|++||+.++ .+.+|...|++++|+|++++|++++.|++|++||++++++...+. +..
T Consensus 129 v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~ 207 (393)
T 1erj_A 129 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IED 207 (393)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSS
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCC
Confidence 344567889999999999999999876 478999999999999999999999999999999999999888876 556
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe--------cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCC
Q 004203 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--------DFYRPIASIAFHASGELLAVASGH-KLYIWRYNM 221 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l--------~h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t 221 (768)
.+.+++|+|.++++|++++.|++|++||+++++.+..+ .|...|.+++|+|+|++|++++.+ .|++||+++
T Consensus 208 ~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 208 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 79999999988999999999999999999999877664 477899999999999999999955 599999986
Q ss_pred Ccccc---------CCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCC
Q 004203 222 REETS---------SPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSE 263 (768)
Q Consensus 222 ~~~~~---------~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~ 263 (768)
..... ....+.+|...|.+++|+|++++|++++. +|++..+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 288 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp -------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC
T ss_pred CCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe
Confidence 43211 12345678899999999999998887764 66666543
No 29
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.91 E-value=2.7e-22 Score=218.29 Aligned_cols=185 Identities=21% Similarity=0.302 Sum_probs=153.9
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCC----CCCCC------------------CCeEEEEECCCCCEEEEEeCCCeEE
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYCP----LSPPP------------------RSTIAAAFSPDGKTLASTHGDHTVK 132 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~~----L~gH~------------------~~VtslafSPDG~~LaSgS~DgtVr 132 (768)
.+...++..|++++ ++.+++|+..++. +..|. ..|.+++|+|||++|++++.|++|+
T Consensus 70 v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~ 148 (393)
T 1erj_A 70 VKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIR 148 (393)
T ss_dssp EEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEE
Confidence 34456778888876 6899999998763 33332 2499999999999999999999999
Q ss_pred EEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcC-CCCEEEEEEC
Q 004203 133 IIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHA-SGELLAVASG 211 (768)
Q Consensus 133 VWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSP-DG~~LatgSd 211 (768)
+||+++++.+..+.+|...|.+++|+| ++++|++++.|++|++||++++++...+.+...+.+++|+| ++++|++++.
T Consensus 149 iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 149 IWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEET
T ss_pred EEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcC
Confidence 999999999999999999999999999 99999999999999999999999988888889999999999 8999999995
Q ss_pred Ce-EEEEEcCCCccccCC----eEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCC
Q 004203 212 HK-LYIWRYNMREETSSP----RIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDS 261 (768)
Q Consensus 212 d~-I~IWDl~t~~~~~~~----~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~s 261 (768)
++ |++||++++...... ....+|...|.+++|+|+|++|++++. +|+++.
T Consensus 228 d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 228 DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 55 999999887643310 112468899999999999998877664 666653
No 30
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.91 E-value=3e-23 Score=220.86 Aligned_cols=176 Identities=16% Similarity=0.203 Sum_probs=141.1
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe---EEEEEecCC
Q 004203 79 DARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS---CLKVLHGHR 149 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~---~l~~l~gH~ 149 (768)
.++..|++++.|+.|++||..+. .+.+|...|++++|+|++++|++++.|++|++||+++++ ....+.+|.
T Consensus 21 ~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~ 100 (377)
T 3dwl_C 21 SQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLN 100 (377)
T ss_dssp SSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCS
T ss_pred CCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccC
Confidence 46778999999999999999864 477999999999999999999999999999999999887 677788999
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE---EEEe-c-CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCc
Q 004203 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC---IGSR-D-FYRPIASIAFHASGELLAVASGH-KLYIWRYNMRE 223 (768)
Q Consensus 150 g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~---i~~l-~-h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~ 223 (768)
..|.+++|+| ++++|++++.|+.|++||+++++. ...+ . |...|.+++|+|++++|++++.+ .|++||+....
T Consensus 101 ~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 101 RAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRD 179 (377)
T ss_dssp SCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSS
T ss_pred CceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecc
Confidence 9999999999 999999999999999999998873 4444 3 88999999999999999999965 59999996432
Q ss_pred cc--------------cCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 224 ET--------------SSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 224 ~~--------------~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
.. ........|...|.+++|+|+|++|++++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 225 (377)
T 3dwl_C 180 VDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGH 225 (377)
T ss_dssp CC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEET
T ss_pred cCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeC
Confidence 10 001111278899999999999998887764
No 31
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.91 E-value=9.1e-22 Score=227.11 Aligned_cols=187 Identities=17% Similarity=0.239 Sum_probs=158.9
Q ss_pred EEecCCCEEEEEeCC----CeEEEEeCCCC--CCCCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeCCCCeEEEEEecC
Q 004203 76 AGRDARRGLASWVEA----ESLHHLRPKYC--PLSPPPRSTIAAAFSPDGK-TLASTHGDHTVKIIDCQTGSCLKVLHGH 148 (768)
Q Consensus 76 a~~d~g~~LvSgs~D----gsIrlWd~~t~--~L~gH~~~VtslafSPDG~-~LaSgS~DgtVrVWDl~tg~~l~~l~gH 148 (768)
+...++..|++++.+ +.|++||.... .+.+|...|++++|+|++. +|++++.|++|++||..++++...+.+|
T Consensus 110 ~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H 189 (611)
T 1nr0_A 110 SWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH 189 (611)
T ss_dssp EECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC
T ss_pred EECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccc
Confidence 344567788887765 47999986543 6889999999999999987 5999999999999999999999999999
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe--------cCCCCeEEEEEcCCCCEEEEEECCe-EEEEEc
Q 004203 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--------DFYRPIASIAFHASGELLAVASGHK-LYIWRY 219 (768)
Q Consensus 149 ~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l--------~h~~~V~svafSPDG~~LatgSdd~-I~IWDl 219 (768)
.+.|++++|+| ++++|++++.|++|+|||+.+++++..+ .|.+.|.+++|+|||++|++++.|+ |++||+
T Consensus 190 ~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~ 268 (611)
T 1nr0_A 190 TKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV 268 (611)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 99999999999 9999999999999999999999988776 5889999999999999999999655 999999
Q ss_pred CCCccccC----------------------------------------CeEeecCCCCeEEEEEccCCCeEEEEEe----
Q 004203 220 NMREETSS----------------------------------------PRIVLRTRRSLRAVHFHPHAAPLLLTAE---- 255 (768)
Q Consensus 220 ~t~~~~~~----------------------------------------~~~l~~h~~~V~sVaFSPDG~~LlaS~s---- 255 (768)
.+++.... ...+.+|...|++++|+|||++|++++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v 348 (611)
T 1nr0_A 269 ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHI 348 (611)
T ss_dssp TTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcE
Confidence 87653210 1123468899999999999998887765
Q ss_pred -eCCcCCCC
Q 004203 256 -VNDLDSSE 263 (768)
Q Consensus 256 -vwdl~sg~ 263 (768)
+|++..+.
T Consensus 349 ~~Wd~~~~~ 357 (611)
T 1nr0_A 349 NSWDISTGI 357 (611)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCc
Confidence 77776543
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=1.9e-22 Score=235.41 Aligned_cols=181 Identities=17% Similarity=0.186 Sum_probs=157.0
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC---------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCC
Q 004203 79 DARRGLASWVEAESLHHLRPKYC---------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR 149 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~---------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~ 149 (768)
++...|++++.|++|++|++... .+.+|...|.+++|+|||++|++|+.|++|+|||+.+++.+..+.+|.
T Consensus 393 ~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~ 472 (694)
T 3dm0_A 393 DNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHT 472 (694)
T ss_dssp TCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCC
Confidence 45678999999999999998753 367899999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe----cCCCCeEEEEEcCCC--CEEEEEECC-eEEEEEcCCC
Q 004203 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR----DFYRPIASIAFHASG--ELLAVASGH-KLYIWRYNMR 222 (768)
Q Consensus 150 g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l----~h~~~V~svafSPDG--~~LatgSdd-~I~IWDl~t~ 222 (768)
+.|.+++|+| ++++|++++.|++|+|||+......... .|...|.+++|+|++ ..|++++.+ .|++||+++.
T Consensus 473 ~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~ 551 (694)
T 3dm0_A 473 KDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC 551 (694)
T ss_dssp SCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC
T ss_pred CCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC
Confidence 9999999999 9999999999999999998765443332 477889999999987 578888855 5999999887
Q ss_pred ccccCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCC
Q 004203 223 EETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSE 263 (768)
Q Consensus 223 ~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~ 263 (768)
+... .+.+|...|++++|+|+|++|++++. +||++.++
T Consensus 552 ~~~~---~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 552 KLRS---TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp CEEE---EECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred cEEE---EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 6533 66789999999999999998887765 77877554
No 33
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=9e-22 Score=207.05 Aligned_cols=223 Identities=15% Similarity=0.153 Sum_probs=173.3
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEeCCCCe--EEEE
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS--CLKV 144 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSPD--G~~LaSgS~DgtVrVWDl~tg~--~l~~ 144 (768)
.+...++..|++++.|+.|++|+.... .+.+|...|++++|+++ +++|++++.|+.|++||+++++ .+..
T Consensus 17 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 96 (379)
T 3jrp_A 17 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV 96 (379)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeee
Confidence 344467889999999999999999733 47799999999999987 9999999999999999999987 7788
Q ss_pred EecCCCCcEEEEEccCC--CCEEEEEeCCCeEEEEECCCCcE---EEEecCCCCeEEEEEcC-------------CCCEE
Q 004203 145 LHGHRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTAEC---IGSRDFYRPIASIAFHA-------------SGELL 206 (768)
Q Consensus 145 l~gH~g~V~sVafSP~d--g~lLaSgS~DgtVrLWDl~sg~~---i~~l~h~~~V~svafSP-------------DG~~L 206 (768)
+.+|...|.+++|+| + +.+|++++.|+.|++||++++.. .....|...|.+++|+| ++.+|
T Consensus 97 ~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l 175 (379)
T 3jrp_A 97 HAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 175 (379)
T ss_dssp ECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEE
T ss_pred ecCCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEE
Confidence 889999999999999 7 89999999999999999998743 23346889999999999 69999
Q ss_pred EEEECC-eEEEEEcCCCcccc-CCeEeecCCCCeEEEEEccC---CCeEEEEEe-----eCCcCCCCcceeEeecCCccc
Q 004203 207 AVASGH-KLYIWRYNMREETS-SPRIVLRTRRSLRAVHFHPH---AAPLLLTAE-----VNDLDSSESSLTLATSPGYWR 276 (768)
Q Consensus 207 atgSdd-~I~IWDl~t~~~~~-~~~~l~~h~~~V~sVaFSPD---G~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~ 276 (768)
++++.+ .|++||+++..... ....+..|...|.+++|+|+ ++++++++. +|+++.+.......
T Consensus 176 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------- 248 (379)
T 3jrp_A 176 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKT------- 248 (379)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEE-------
T ss_pred EEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceee-------
Confidence 999955 59999998765432 12345568999999999999 776666653 44443321110000
Q ss_pred CCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecC
Q 004203 277 YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 277 ~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d 324 (768)
+ ........+++.++|+|||+.|+....+
T Consensus 249 -------~------------~~~~~~~~~v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 249 -------L------------LKEEKFPDVLWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp -------E------------SSSSCCSSCEEEEEECSSSCCEEEEESS
T ss_pred -------e------------eccccCCCcEEEEEEcCCCCEEEEecCC
Confidence 0 0011123456688999999999886543
No 34
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.90 E-value=9.6e-23 Score=215.32 Aligned_cols=178 Identities=16% Similarity=0.134 Sum_probs=144.9
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEeCCCC--eEEEEEe
Q 004203 77 GRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTG--SCLKVLH 146 (768)
Q Consensus 77 ~~d~g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSP--DG~~LaSgS~DgtVrVWDl~tg--~~l~~l~ 146 (768)
...++..|++++.|++|++||+..+ .+.+|...|.+++|++ ++++|++++.|++|++||++++ +....+.
T Consensus 21 ~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~ 100 (316)
T 3bg1_A 21 MDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHA 100 (316)
T ss_dssp ECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEEC
T ss_pred EcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEcc
Confidence 3456789999999999999998754 4679999999999986 4899999999999999999987 4667788
Q ss_pred cCCCCcEEEEEccCC-CCEEEEEeCCCeEEEEECCCCcEE---EE-ecCCCCeEEEEEcCC-----------------CC
Q 004203 147 GHRRTPWVVRFHPLN-PTIIASGSLDHEVRLWNASTAECI---GS-RDFYRPIASIAFHAS-----------------GE 204 (768)
Q Consensus 147 gH~g~V~sVafSP~d-g~lLaSgS~DgtVrLWDl~sg~~i---~~-l~h~~~V~svafSPD-----------------G~ 204 (768)
+|...|++++|+|++ +.+|++++.|++|++||++.+... .. ..|...+.+++|+|+ ++
T Consensus 101 ~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (316)
T 3bg1_A 101 GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIK 180 (316)
T ss_dssp CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCC
T ss_pred CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccc
Confidence 999999999999932 789999999999999999876432 22 247788999999998 46
Q ss_pred EEEEEECC-eEEEEEcCCCccccCCeEeecCCCCeEEEEEccCC----CeEEEEE
Q 004203 205 LLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHA----APLLLTA 254 (768)
Q Consensus 205 ~LatgSdd-~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG----~~LlaS~ 254 (768)
+|++++.| .|++||++..........+.+|...|++++|+|++ ++|++++
T Consensus 181 ~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 181 RFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp BEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred eEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 89998855 59999997543211122456799999999999997 5555554
No 35
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.90 E-value=6.6e-22 Score=209.19 Aligned_cols=175 Identities=18% Similarity=0.225 Sum_probs=151.9
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCC
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g 150 (768)
.+...++..|++++.|++|++||+.++ .+.+|...|.+++|+|++++|++++.|++|++||++ ++++..+.+|..
T Consensus 71 ~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~ 149 (319)
T 3frx_A 71 CTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHND 149 (319)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSS
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCC
Confidence 344567889999999999999999887 477999999999999999999999999999999996 567888899999
Q ss_pred CcEEEEEccC-----CCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCc
Q 004203 151 TPWVVRFHPL-----NPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGH-KLYIWRYNMRE 223 (768)
Q Consensus 151 ~V~sVafSP~-----dg~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~ 223 (768)
.|.++.|+|. ++..+++++.|++|++||+++++....+ +|...|.+++|+|+|++|++++.+ .|++||+.+.+
T Consensus 150 ~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 150 WVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp CEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred cEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999983 2348999999999999999998887765 588999999999999999999955 59999999886
Q ss_pred cccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 224 ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 224 ~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
... ...+...|.+++|+|++.+++++.
T Consensus 230 ~~~----~~~~~~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 230 AMY----TLSAQDEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp EEE----EEECCSCEEEEEECSSSSEEEEEE
T ss_pred EEE----EecCCCcEEEEEEcCCCCEEEEEc
Confidence 533 334567899999999999776654
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.90 E-value=1.1e-21 Score=220.63 Aligned_cols=216 Identities=25% Similarity=0.365 Sum_probs=170.5
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC---CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCC
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~---~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~ 151 (768)
.+...++..|++++.|+.|++|+.... .+.+|...|.+++|+|||++|++++.|+.|++||. +++.+..+.+|...
T Consensus 350 ~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~ 428 (577)
T 2ymu_A 350 VAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS 428 (577)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSC
T ss_pred EEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCC
Confidence 344567889999999999999997544 46789999999999999999999999999999995 57888999999999
Q ss_pred cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCeE
Q 004203 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRI 230 (768)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSdd~-I~IWDl~t~~~~~~~~~ 230 (768)
|++++|+| ++++|++++.|++|++||+..........|...|.+++|+||+++|++++.++ |++||.. ++. ...
T Consensus 429 v~~~~~s~-d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~---~~~ 503 (577)
T 2ymu_A 429 VWGVAFSP-DDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQL---LQT 503 (577)
T ss_dssp EEEEEECT-TSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCE---EEE
T ss_pred eEEEEECC-CCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCE---EEE
Confidence 99999999 99999999999999999975443333456899999999999999999999655 9999964 333 235
Q ss_pred eecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceEEE
Q 004203 231 VLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPS 310 (768)
Q Consensus 231 l~~h~~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~ps 310 (768)
+.+|...|++++|+|||++|++++... .+++|+.. +. ......+...+++..+
T Consensus 504 ~~~h~~~v~~l~~s~dg~~l~s~~~dg-----------------------~v~lwd~~-~~---~~~~~~~h~~~v~~~~ 556 (577)
T 2ymu_A 504 LTGHSSSVRGVAFSPDGQTIASASDDK-----------------------TVKLWNRN-GQ---LLQTLTGHSSSVWGVA 556 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTS-----------------------EEEEECTT-SC---EEEEEECCSSCEEEEE
T ss_pred EeCCCCCEEEEEEcCCCCEEEEEECcC-----------------------EEEEEeCC-CC---EEEEEcCCCCCEEEEE
Confidence 778999999999999999888776411 12222210 00 0011112334667889
Q ss_pred EecCCCEEEEEec
Q 004203 311 FVRDDERISLQHT 323 (768)
Q Consensus 311 FSpDG~rIv~~~~ 323 (768)
|+|||++|+....
T Consensus 557 fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 557 FSPDGQTIASASS 569 (577)
T ss_dssp ECTTSSCEEEEET
T ss_pred EcCCCCEEEEEeC
Confidence 9999999987544
No 37
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.5e-21 Score=204.22 Aligned_cols=243 Identities=10% Similarity=0.041 Sum_probs=184.0
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCC
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g 150 (768)
.+...++..|++++.|+.|++||..++ .+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +..
T Consensus 38 ~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~ 116 (369)
T 3zwl_B 38 VKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPV 116 (369)
T ss_dssp EEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSS
T ss_pred EEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCC
Confidence 334457889999999999999999876 477899999999999999999999999999999999999998888 888
Q ss_pred CcEEEEEccCCCCEEEEEeCC-----CeEEEEECCCCcE------------EEEecCCC--CeEEEEEcCCCCEEEEEEC
Q 004203 151 TPWVVRFHPLNPTIIASGSLD-----HEVRLWNASTAEC------------IGSRDFYR--PIASIAFHASGELLAVASG 211 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~D-----gtVrLWDl~sg~~------------i~~l~h~~--~V~svafSPDG~~LatgSd 211 (768)
.|.+++|+| +++++++++.+ +.|++||+..+.. .....+.. .+.+++|+|++++|++++.
T Consensus 117 ~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 195 (369)
T 3zwl_B 117 PVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK 195 (369)
T ss_dssp CEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET
T ss_pred CeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC
Confidence 999999999 99999999999 9999999987542 11123444 8999999999999999985
Q ss_pred C-eEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCccc--C-CC---
Q 004203 212 H-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR--Y-PP--- 279 (768)
Q Consensus 212 d-~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~--~-p~--- 279 (768)
+ .|++||+++... ....+..|...|.+++|+|++++|++++. +|+++.+.....+........ + +.
T Consensus 196 dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (369)
T 3zwl_B 196 DGKISKYDVSNNYE--YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEF 273 (369)
T ss_dssp TSEEEEEETTTTTE--EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSE
T ss_pred CCEEEEEECCCCcE--eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCce
Confidence 4 599999988432 12356678899999999999998887764 788876554443331110000 0 00
Q ss_pred -------C--------------eEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecC
Q 004203 280 -------P--------------VICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 280 -------~--------------~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d 324 (768)
. .+.+|+.......... .....++....|+||++.|+....|
T Consensus 274 l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 274 IILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV---QGHFGPLNTVAISPQGTSYASGGED 336 (369)
T ss_dssp EEEEECCC-------------CEEEEEETTTCCEEEEE---ECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe---ecccCcEEEEEECCCCCEEEEEcCC
Confidence 0 3455554443322222 2334567789999999998876443
No 38
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.90 E-value=1.4e-21 Score=208.92 Aligned_cols=180 Identities=21% Similarity=0.301 Sum_probs=150.4
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC---eEEEEE
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG---SCLKVL 145 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg---~~l~~l 145 (768)
.+...++..|++++.|+.|++|+.... .+.+|...|.+++|+|++++|++++.|++|++||++++ +++..+
T Consensus 67 ~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 67 VAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred EEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe
Confidence 344567889999999999999998754 47799999999999999999999999999999999876 356778
Q ss_pred ecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEE--EEe-cCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCC
Q 004203 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI--GSR-DFYRPIASIAFHASGELLAVASGHK-LYIWRYNM 221 (768)
Q Consensus 146 ~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i--~~l-~h~~~V~svafSPDG~~LatgSdd~-I~IWDl~t 221 (768)
.+|...|.+++|+| ++++|++++.|++|++||+++++.. ..+ +|...|.+++|+|+|++|++++.|+ |++||...
T Consensus 147 ~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 147 NSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp CCCCSCEEEEEECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred cCcCCCeEEEEECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecccc
Confidence 89999999999999 9999999999999999999887643 333 5889999999999999999999655 99999754
Q ss_pred CccccC------------CeEeec-CCCCeEEEEEccCCCeEEEEEe
Q 004203 222 REETSS------------PRIVLR-TRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 222 ~~~~~~------------~~~l~~-h~~~V~sVaFSPDG~~LlaS~s 255 (768)
...... ...+.+ |...|.+++|+|++..+++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~ 272 (345)
T 3fm0_A 226 PGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACG 272 (345)
T ss_dssp TTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEET
T ss_pred CCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeC
Confidence 322110 011222 7789999999999998887765
No 39
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.90 E-value=6.6e-21 Score=214.52 Aligned_cols=185 Identities=11% Similarity=0.035 Sum_probs=153.2
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCC--------CCCCCCCC-eEEEEECC--CCCEEEEEeCCCeEEEEeCCCC------
Q 004203 77 GRDARRGLASWVEAESLHHLRPKYC--------PLSPPPRS-TIAAAFSP--DGKTLASTHGDHTVKIIDCQTG------ 139 (768)
Q Consensus 77 ~~d~g~~LvSgs~DgsIrlWd~~t~--------~L~gH~~~-VtslafSP--DG~~LaSgS~DgtVrVWDl~tg------ 139 (768)
...++..|+.++ ++.|++|+..++ .+.+|... |++++|+| |+++|++++.|+.|++||+.++
T Consensus 26 ~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~ 104 (615)
T 1pgu_A 26 YDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSV 104 (615)
T ss_dssp EETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEE
T ss_pred ECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccc
Confidence 335677777777 789999999865 26789999 99999999 9999999999999999999755
Q ss_pred --eEEEEEecCCCCcEEEEEccCCCCEEEEEeCC----CeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCC-EEEEEEC
Q 004203 140 --SCLKVLHGHRRTPWVVRFHPLNPTIIASGSLD----HEVRLWNASTAECIGSR-DFYRPIASIAFHASGE-LLAVASG 211 (768)
Q Consensus 140 --~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~D----gtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~-~LatgSd 211 (768)
+.+..+.+|...|.+++|+| +++++++++.| +.|++|| .++.+..+ .|...|.+++|+|+++ +|++++.
T Consensus 105 ~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 181 (615)
T 1pgu_A 105 EVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD 181 (615)
T ss_dssp EEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEET
T ss_pred cccccchhhcccccEEEEEEeC-CCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeC
Confidence 67788889999999999999 99999999988 6888888 45555554 5888999999999998 7888885
Q ss_pred -CeEEEEEcCCCccccCCeEeecCCC---CeEEEEEccC-CCeEEEEEe-----eCCcCCCCcceeE
Q 004203 212 -HKLYIWRYNMREETSSPRIVLRTRR---SLRAVHFHPH-AAPLLLTAE-----VNDLDSSESSLTL 268 (768)
Q Consensus 212 -d~I~IWDl~t~~~~~~~~~l~~h~~---~V~sVaFSPD-G~~LlaS~s-----vwdl~sg~~~~~L 268 (768)
+.|++||+.+.+... .+..|.. .|.+++|+|+ ++++++++. +|+++.++....+
T Consensus 182 d~~v~vwd~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 182 DGSVVFYQGPPFKFSA---SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp TTEEEEEETTTBEEEE---EECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEEC
T ss_pred CCcEEEEeCCCcceee---eecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEe
Confidence 459999998876543 5667888 9999999999 998887764 7777765543333
No 40
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.90 E-value=7.3e-22 Score=203.11 Aligned_cols=194 Identities=16% Similarity=0.143 Sum_probs=156.7
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC--------CCCCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEeCCCC------
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYC--------PLSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTG------ 139 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~--------~L~gH~~~VtslafSP--DG~~LaSgS~DgtVrVWDl~tg------ 139 (768)
....++..|++++.|+.|++||.... .+.+|...|++++|+| |+++|++++.|+.|++||++++
T Consensus 18 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~ 97 (351)
T 3f3f_A 18 VYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSG 97 (351)
T ss_dssp EECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSS
T ss_pred EEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccc
Confidence 34457889999999999999999864 2468999999999999 6999999999999999999887
Q ss_pred ---eEEEEEecCCCCcEEEEEccCC--CCEEEEEeCCCeEEEEECCCCcE------------------------------
Q 004203 140 ---SCLKVLHGHRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTAEC------------------------------ 184 (768)
Q Consensus 140 ---~~l~~l~gH~g~V~sVafSP~d--g~lLaSgS~DgtVrLWDl~sg~~------------------------------ 184 (768)
+.+..+.+|.+.|.+++|+| + ++++++++.|+.|++||+++++.
T Consensus 98 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (351)
T 3f3f_A 98 RRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWC 176 (351)
T ss_dssp CSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEEC
T ss_pred cCcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEec
Confidence 66888899999999999999 7 99999999999999999976542
Q ss_pred ------------------------------EEEe-cCCCCeEEEEEcCCC----CEEEEEECCe-EEEEEcCCCccc---
Q 004203 185 ------------------------------IGSR-DFYRPIASIAFHASG----ELLAVASGHK-LYIWRYNMREET--- 225 (768)
Q Consensus 185 ------------------------------i~~l-~h~~~V~svafSPDG----~~LatgSdd~-I~IWDl~t~~~~--- 225 (768)
+..+ .|...|.+++|+|++ ++|++++.++ |++||++.....
T Consensus 177 p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 256 (351)
T 3f3f_A 177 PSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLAS 256 (351)
T ss_dssp CCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----
T ss_pred cCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCcccc
Confidence 1112 377899999999998 7899999554 999999874210
Q ss_pred ----------------------------------------cCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcC
Q 004203 226 ----------------------------------------SSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLD 260 (768)
Q Consensus 226 ----------------------------------------~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~ 260 (768)
.....+.+|...|++++|+|++++|++++. +|++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 257 EESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp ----------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecC
Confidence 112234568899999999999998888764 66666
Q ss_pred CCCcceeEee
Q 004203 261 SSESSLTLAT 270 (768)
Q Consensus 261 sg~~~~~L~t 270 (768)
.+.....+..
T Consensus 337 ~~~~~~~~~~ 346 (351)
T 3f3f_A 337 YSNEFKCMSV 346 (351)
T ss_dssp TTSCEEEEEE
T ss_pred cCcchhheee
Confidence 5544444443
No 41
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.89 E-value=1.3e-21 Score=212.22 Aligned_cols=191 Identities=12% Similarity=0.141 Sum_probs=151.7
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC---------------CCCCCC------------CCeEEEEECCCC--CEEEEEe
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYC---------------PLSPPP------------RSTIAAAFSPDG--KTLASTH 126 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~---------------~L~gH~------------~~VtslafSPDG--~~LaSgS 126 (768)
+...++..|++++.|+.|++|+..+. .+.+|. ..|++++|+|++ .+|++++
T Consensus 35 ~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s 114 (447)
T 3dw8_B 35 EFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLST 114 (447)
T ss_dssp EECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeC
Confidence 34457889999999999999998753 356898 889999999998 8999999
Q ss_pred CCCeEEEEeCCCCeEE---------------------------------------EE-EecCCCCcEEEEEccCCCCEEE
Q 004203 127 GDHTVKIIDCQTGSCL---------------------------------------KV-LHGHRRTPWVVRFHPLNPTIIA 166 (768)
Q Consensus 127 ~DgtVrVWDl~tg~~l---------------------------------------~~-l~gH~g~V~sVafSP~dg~lLa 166 (768)
.|++|++||+.+++.. .. +.+|...|.+++|+| ++++|+
T Consensus 115 ~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~ 193 (447)
T 3dw8_B 115 NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS-DYETYL 193 (447)
T ss_dssp CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT-TSSEEE
T ss_pred CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC-CCCEEE
Confidence 9999999999775432 12 368999999999999 999999
Q ss_pred EEeCCCeEEEEECCC-CcEEEEe--------cCCCCeEEEEEcCCC-CEEEEEECCe-EEEEEcCCCccccC-CeEeecC
Q 004203 167 SGSLDHEVRLWNAST-AECIGSR--------DFYRPIASIAFHASG-ELLAVASGHK-LYIWRYNMREETSS-PRIVLRT 234 (768)
Q Consensus 167 SgS~DgtVrLWDl~s-g~~i~~l--------~h~~~V~svafSPDG-~~LatgSdd~-I~IWDl~t~~~~~~-~~~l~~h 234 (768)
++ .|+.|++||+++ ++....+ .|...|.+++|+|++ ++|++++.++ |++||+++++.... ...+..|
T Consensus 194 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 272 (447)
T 3dw8_B 194 SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEP 272 (447)
T ss_dssp EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC
T ss_pred Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccC
Confidence 98 799999999994 4454432 588899999999999 8999999655 99999998764211 2344555
Q ss_pred CC------------CeEEEEEccCCCeEEEEEe----eCCcCC-CCcceeE
Q 004203 235 RR------------SLRAVHFHPHAAPLLLTAE----VNDLDS-SESSLTL 268 (768)
Q Consensus 235 ~~------------~V~sVaFSPDG~~LlaS~s----vwdl~s-g~~~~~L 268 (768)
.. .|.+++|+|+|++|++++. +|+++. +.....+
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETY 323 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCE
T ss_pred CCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCcccccee
Confidence 54 8999999999998887664 788875 4444333
No 42
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.89 E-value=2e-21 Score=202.52 Aligned_cols=150 Identities=21% Similarity=0.375 Sum_probs=136.7
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC
Q 004203 102 PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST 181 (768)
Q Consensus 102 ~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~s 181 (768)
.+.+|...|++++|+|++++|++++.|+.|++||+.+++....+.+|...|.+++|+| ++++|++++.|+.|++||+++
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTT
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEEECCC
Confidence 4678999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CcEEEEe-cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 182 AECIGSR-DFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 182 g~~i~~l-~h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
++++..+ .|...|.+++|+|++++|++++.+ .|++||+++++... .+..|...|.++.|+|+++++++++.
T Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 97 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK---TLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEE---EecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 9988776 488899999999999999999955 49999999877543 56678899999999999998777664
No 43
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.89 E-value=8e-21 Score=196.52 Aligned_cols=216 Identities=11% Similarity=0.081 Sum_probs=171.2
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCC----C-----CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe--EEE
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYCP----L-----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS--CLK 143 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~~----L-----~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~--~l~ 143 (768)
.+...++..|++++ |+.|++|+..... + .+|...|.+++|+|++++|++++.|+.|++||+++++ ...
T Consensus 57 ~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 135 (337)
T 1gxr_A 57 VTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKA 135 (337)
T ss_dssp EEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEE
T ss_pred EEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceee
Confidence 33446778888888 9999999997652 2 2789999999999999999999999999999999887 667
Q ss_pred EEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCC
Q 004203 144 VLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGH-KLYIWRYNM 221 (768)
Q Consensus 144 ~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t 221 (768)
.+.+|...|.+++|+| +++++++++.|+.|++||+++++.+..+. |...+.+++|+|++++|++++.+ .|++||+++
T Consensus 136 ~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 214 (337)
T 1gxr_A 136 ELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 214 (337)
T ss_dssp EEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCC
Confidence 7889999999999999 99999999999999999999999888765 78899999999999999999955 599999998
Q ss_pred CccccCCeEeecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCC
Q 004203 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPL 301 (768)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~ 301 (768)
.+... ...+...+.+++|+|+++++++++... .+.+++........ ...
T Consensus 215 ~~~~~----~~~~~~~v~~~~~s~~~~~l~~~~~~~-----------------------~i~~~~~~~~~~~~----~~~ 263 (337)
T 1gxr_A 215 GRQLQ----QHDFTSQIFSLGYCPTGEWLAVGMESS-----------------------NVEVLHVNKPDKYQ----LHL 263 (337)
T ss_dssp TEEEE----EEECSSCEEEEEECTTSSEEEEEETTS-----------------------CEEEEETTSSCEEE----ECC
T ss_pred CceEe----eecCCCceEEEEECCCCCEEEEEcCCC-----------------------cEEEEECCCCCeEE----EcC
Confidence 86533 345788999999999999888776311 12222221111100 111
Q ss_pred CCCCceEEEEecCCCEEEEEec
Q 004203 302 ITPPFLRPSFVRDDERISLQHT 323 (768)
Q Consensus 302 ~slpil~psFSpDG~rIv~~~~ 323 (768)
...++....|++|++.++....
T Consensus 264 ~~~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 264 HESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEET
T ss_pred CccceeEEEECCCCCEEEEecC
Confidence 2335668899999999887644
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.89 E-value=1.6e-21 Score=204.13 Aligned_cols=242 Identities=17% Similarity=0.173 Sum_probs=181.3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC----C-----CCCCCCeEEEEECCC----CCEEEEEeCCCeEEEEeCCCCeEEEEEe
Q 004203 80 ARRGLASWVEAESLHHLRPKYCP----L-----SPPPRSTIAAAFSPD----GKTLASTHGDHTVKIIDCQTGSCLKVLH 146 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~----L-----~gH~~~VtslafSPD----G~~LaSgS~DgtVrVWDl~tg~~l~~l~ 146 (768)
+...++++..++.|++|+..+.. + ..|...|++++|+|+ |++|++++.|+.|++||+++++.+..+.
T Consensus 33 ~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 112 (366)
T 3k26_A 33 GDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV 112 (366)
T ss_dssp TSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE
T ss_pred CCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec
Confidence 45667777777799999998652 1 237789999999998 6799999999999999999999999999
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe----cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCC
Q 004203 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR----DFYRPIASIAFHASGELLAVASGH-KLYIWRYNM 221 (768)
Q Consensus 147 gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l----~h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t 221 (768)
+|...|.+++|+|+++++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++++|++++.+ .|++||+++
T Consensus 113 ~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 113 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 999999999999978899999999999999999999988886 588999999999999999999955 599999987
Q ss_pred CccccC-------------------------CeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCc-------
Q 004203 222 REETSS-------------------------PRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSES------- 264 (768)
Q Consensus 222 ~~~~~~-------------------------~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~------- 264 (768)
.+.... ......|...|.+++|+ ++++++++. +|+++....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 270 (366)
T 3k26_A 193 KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKP 270 (366)
T ss_dssp HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCT
T ss_pred CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccccccccc
Confidence 654220 01112288899999999 666666554 777665432
Q ss_pred ----ceeEeecCCc----------------c---cCCCCeEEEecCCCCCCCC-cccccCCC--CCCceEEEEecCCCEE
Q 004203 265 ----SLTLATSPGY----------------W---RYPPPVICMAGAHSSSHPG-LAEEVPLI--TPPFLRPSFVRDDERI 318 (768)
Q Consensus 265 ----~~~L~t~~G~----------------~---~~p~~~V~l~d~~s~d~~~-L~~~~~~~--slpil~psFSpDG~rI 318 (768)
...+....++ . ......+.+|+...+.... ........ ..++....|++|++.|
T Consensus 271 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 350 (366)
T 3k26_A 271 SESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSIL 350 (366)
T ss_dssp TCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred CCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeE
Confidence 0111111111 0 0123567778876654332 11122222 4677789999999999
Q ss_pred EEEec
Q 004203 319 SLQHT 323 (768)
Q Consensus 319 v~~~~ 323 (768)
+....
T Consensus 351 ~s~~~ 355 (366)
T 3k26_A 351 IAVCD 355 (366)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 87544
No 45
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.7e-21 Score=209.00 Aligned_cols=194 Identities=12% Similarity=0.166 Sum_probs=160.9
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCC----C----CCCCCCCCeEEEEECCC-CCEEEEEeCCCeEEEEeCCCCe-----
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKY----C----PLSPPPRSTIAAAFSPD-GKTLASTHGDHTVKIIDCQTGS----- 140 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t----~----~L~gH~~~VtslafSPD-G~~LaSgS~DgtVrVWDl~tg~----- 140 (768)
.+...++..|++++.|+.|++|+... . .+.+|...|++++|+|+ +++|++++.|+.|++||+++++
T Consensus 73 ~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 152 (416)
T 2pm9_A 73 LDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN 152 (416)
T ss_dssp EEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT
T ss_pred EEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc
Confidence 34456788999999999999999987 1 47789999999999998 8999999999999999999886
Q ss_pred -EEE---EEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-------CCCeEEEEEcCCC-CEEEE
Q 004203 141 -CLK---VLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-------YRPIASIAFHASG-ELLAV 208 (768)
Q Consensus 141 -~l~---~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h-------~~~V~svafSPDG-~~Lat 208 (768)
... .+.+|...|.+++|+|+++.++++++.|+.|++||+++++.+..+.. ...+.+++|+|++ .+|++
T Consensus 153 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 153 YTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred ccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 332 34679999999999994489999999999999999999998887753 6789999999997 58888
Q ss_pred EECC----eEEEEEcCCCccccCCeEee-cCCCCeEEEEEcc-CCCeEEEEEe-----eCCcCCCCcceeEee
Q 004203 209 ASGH----KLYIWRYNMREETSSPRIVL-RTRRSLRAVHFHP-HAAPLLLTAE-----VNDLDSSESSLTLAT 270 (768)
Q Consensus 209 gSdd----~I~IWDl~t~~~~~~~~~l~-~h~~~V~sVaFSP-DG~~LlaS~s-----vwdl~sg~~~~~L~t 270 (768)
++++ .|++||+++.... ...+. .|...|.+++|+| ++++|++++. +|+++.++....+..
T Consensus 233 ~~~d~~~~~i~~~d~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 233 ATGSDNDPSILIWDLRNANTP--LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp EECCSSSCCCCEEETTSTTSC--SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC
T ss_pred EECCCCCceEEEEeCCCCCCC--cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC
Confidence 8854 7999999986431 22344 6889999999999 8888887764 788877655555443
No 46
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.89 E-value=4.4e-22 Score=215.63 Aligned_cols=175 Identities=18% Similarity=0.231 Sum_probs=149.1
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC---------CCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCC-CCeEEEEEecC
Q 004203 80 ARRGLASWVEAESLHHLRPKYCP---------LSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQ-TGSCLKVLHGH 148 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~---------L~gH~~~VtslafSP-DG~~LaSgS~DgtVrVWDl~-tg~~l~~l~gH 148 (768)
.+..|++++.|++|++||+.+++ ..+|...|.+++|++ ++++|++|+.|++|++||++ +++.+..+.+|
T Consensus 169 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h 248 (380)
T 3iz6_a 169 QETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH 248 (380)
T ss_dssp SSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC
T ss_pred CCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCc
Confidence 35579999999999999998763 168999999999987 89999999999999999998 45778899999
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC--------CCeEEEEEcCCCCEEEEEECCe-EEEEEc
Q 004203 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY--------RPIASIAFHASGELLAVASGHK-LYIWRY 219 (768)
Q Consensus 149 ~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~--------~~V~svafSPDG~~LatgSdd~-I~IWDl 219 (768)
.+.|++++|+| ++++|++++.|++|++||+++++.+..+... ..|.+++|+|+|++|++++.++ |++||+
T Consensus 249 ~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~ 327 (380)
T 3iz6_a 249 EGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDT 327 (380)
T ss_dssp SSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEET
T ss_pred CCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEEC
Confidence 99999999999 9999999999999999999999988776421 2488999999999999998554 999999
Q ss_pred CCCccccCC-eEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 220 NMREETSSP-RIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 220 ~t~~~~~~~-~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
.+++..... ....+|...|.+++|+|||++|++++.
T Consensus 328 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 328 LLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp TTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred CCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC
Confidence 887653311 011468899999999999998777654
No 47
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.89 E-value=4.6e-22 Score=214.54 Aligned_cols=177 Identities=15% Similarity=0.112 Sum_probs=151.5
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeCCCCeEEEEEe--c
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGK-TLASTHGDHTVKIIDCQTGSCLKVLH--G 147 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~-~LaSgS~DgtVrVWDl~tg~~l~~l~--g 147 (768)
.+...++..|++++.|+.|++||..++ .+.+|...|++++|+++++ +|++++.|++|++||+++++....+. .
T Consensus 145 v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~ 224 (357)
T 4g56_B 145 LSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCA 224 (357)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTT
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecc
Confidence 345567889999999999999999877 4789999999999999875 78999999999999999988765543 5
Q ss_pred CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCC-CEEEEEECC-eEEEEEcCCCcc
Q 004203 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASG-ELLAVASGH-KLYIWRYNMREE 224 (768)
Q Consensus 148 H~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG-~~LatgSdd-~I~IWDl~t~~~ 224 (768)
|...+.+++|+|+++.+|++|+.|+.|++||+++++++..+. |...|.+++|+|++ ++|++++.| .|+|||+++++.
T Consensus 225 ~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 225 SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV 304 (357)
T ss_dssp CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE
T ss_pred ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 667899999999667899999999999999999998887764 78899999999997 578888855 599999988765
Q ss_pred ccCCeEeecCCCCeEEEEEcc-CCCeEEEEEe
Q 004203 225 TSSPRIVLRTRRSLRAVHFHP-HAAPLLLTAE 255 (768)
Q Consensus 225 ~~~~~~l~~h~~~V~sVaFSP-DG~~LlaS~s 255 (768)
. ...+|...|++|+|+| |+++|++++.
T Consensus 305 ~----~~~~H~~~V~~vafsP~d~~~l~s~s~ 332 (357)
T 4g56_B 305 F----RDLSHRDFVTGVAWSPLDHSKFTTVGW 332 (357)
T ss_dssp E----EECCCSSCEEEEEECSSSTTEEEEEET
T ss_pred e----EECCCCCCEEEEEEeCCCCCEEEEEcC
Confidence 3 3568999999999999 7786666653
No 48
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.89 E-value=1.1e-20 Score=196.45 Aligned_cols=242 Identities=16% Similarity=0.182 Sum_probs=183.4
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC---------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCC
Q 004203 79 DARRGLASWVEAESLHHLRPKYC---------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR 149 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~---------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~ 149 (768)
+.+..|++++.|++|++||+... .+.+|...|.+++|+|||++|++++.|+.|++|+............+.
T Consensus 49 ~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~ 128 (340)
T 4aow_A 49 QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT 128 (340)
T ss_dssp TCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCC
Confidence 34678999999999999998753 367899999999999999999999999999999999999988888899
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE--ecCCCCeEEEEEcCCC--CEEEEEECC-eEEEEEcCCCcc
Q 004203 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--RDFYRPIASIAFHASG--ELLAVASGH-KLYIWRYNMREE 224 (768)
Q Consensus 150 g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~--l~h~~~V~svafSPDG--~~LatgSdd-~I~IWDl~t~~~ 224 (768)
..+..+.+++ ++.+|++++.|+.+++||+........ ..|...+..++|++++ .++++++.+ .|++||+++.+.
T Consensus 129 ~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~ 207 (340)
T 4aow_A 129 KDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL 207 (340)
T ss_dssp SCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE
T ss_pred CceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce
Confidence 9999999999 899999999999999999987665443 3578899999999876 467777754 599999998876
Q ss_pred ccCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCc----------cc--CCCCeEEEecC
Q 004203 225 TSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGY----------WR--YPPPVICMAGA 287 (768)
Q Consensus 225 ~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~----------~~--~p~~~V~l~d~ 287 (768)
.. .+.+|...|++++|+|++++|++++. +|+++.......+...... +- .....+.+|+.
T Consensus 208 ~~---~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~ 284 (340)
T 4aow_A 208 KT---NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDL 284 (340)
T ss_dssp EE---EECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEET
T ss_pred ee---EecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEEC
Confidence 44 66789999999999999998887664 7777755443333221110 00 01244566665
Q ss_pred CCCCCCC------cccccCCCCCCceEEEEecCCCEEEEEecC
Q 004203 288 HSSSHPG------LAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 288 ~s~d~~~------L~~~~~~~slpil~psFSpDG~rIv~~~~d 324 (768)
....... ...........+...+|+|||+.|+....|
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 285 EGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD 327 (340)
T ss_dssp TTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT
T ss_pred CCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC
Confidence 4322111 111122345567789999999999876544
No 49
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.89 E-value=3e-20 Score=229.21 Aligned_cols=199 Identities=20% Similarity=0.323 Sum_probs=158.4
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC
Q 004203 102 PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST 181 (768)
Q Consensus 102 ~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~s 181 (768)
.+.+|.+.|++++|+|||++|++++.|++|++||+.+++.+..+.+|.+.|.+++|+| +++++++++.|++|++||+.+
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSS-DDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTT
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEECCC
Confidence 3568999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CcEEEEe-cCCCCeEEEEEcCC--CCEEEEEECCe-EEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe--
Q 004203 182 AECIGSR-DFYRPIASIAFHAS--GELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-- 255 (768)
Q Consensus 182 g~~i~~l-~h~~~V~svafSPD--G~~LatgSdd~-I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-- 255 (768)
++.+..+ .|...|.+++|+|+ +.++++++.++ |++||+++++... .+.+|...|.+++|+|+++++++++.
T Consensus 689 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~---~~~~h~~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN---TMFGHTNSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE---EECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh---eecCCCCCEEEEEEecCCCEEEEEECCC
Confidence 9988886 58889999999994 55888888654 9999999887543 66789999999999999998887765
Q ss_pred ---eCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEe
Q 004203 256 ---VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQH 322 (768)
Q Consensus 256 ---vwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~ 322 (768)
+|++..+.....+........ ...........+...+|++||+.+++..
T Consensus 766 ~v~vwd~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~v~~~~~s~dg~~l~~~~ 817 (1249)
T 3sfz_A 766 TLRLWDVRSANERKSINVKRFFLS------------------SEDPPEDVEVIVKCCSWSADGDKIIVAA 817 (1249)
T ss_dssp EEEEEEGGGTEEEEEEECCCCC--------------------------CCCCCBCCCCBCTTSSEEEEEE
T ss_pred eEEEEeCCCCcccceecccccccc------------------cCCccccccceEEEEEECCCCCEEEEEc
Confidence 666664433222221111000 0000111222344678999999999854
No 50
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.89 E-value=2.4e-21 Score=209.82 Aligned_cols=178 Identities=18% Similarity=0.221 Sum_probs=153.1
Q ss_pred EEec-CCCEEEEEeCCCeEEEEeCCCC-----------CCCCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeCCCCeEE
Q 004203 76 AGRD-ARRGLASWVEAESLHHLRPKYC-----------PLSPPPRSTIAAAFSPDG-KTLASTHGDHTVKIIDCQTGSCL 142 (768)
Q Consensus 76 a~~d-~g~~LvSgs~DgsIrlWd~~t~-----------~L~gH~~~VtslafSPDG-~~LaSgS~DgtVrVWDl~tg~~l 142 (768)
+... ++..|++++.|+.|++|++.+. .+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.+
T Consensus 88 ~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 167 (402)
T 2aq5_A 88 AWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV 167 (402)
T ss_dssp EECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE
T ss_pred EeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc
Confidence 3444 7889999999999999999865 245899999999999998 69999999999999999999999
Q ss_pred EEE--ecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe--cCCCC-eEEEEEcCCCCEEEEE---E-CCe
Q 004203 143 KVL--HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRP-IASIAFHASGELLAVA---S-GHK 213 (768)
Q Consensus 143 ~~l--~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l--~h~~~-V~svafSPDG~~Latg---S-dd~ 213 (768)
..+ .+|.+.|.+++|+| ++++|++++.|+.|++||+++++.+..+ .|.+. +..++|+|++++|+++ + ++.
T Consensus 168 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~ 246 (402)
T 2aq5_A 168 LTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQ 246 (402)
T ss_dssp EEECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEE
T ss_pred EEEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCce
Confidence 999 88999999999999 9999999999999999999999988876 46554 8999999999999998 4 445
Q ss_pred EEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 214 LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 214 I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
|++||+++.+... ......+...+.++.|+|+++++++++.
T Consensus 247 i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~g~ 287 (402)
T 2aq5_A 247 VALWDTKHLEEPL-SLQELDTSSGVLLPFFDPDTNIVYLCGK 287 (402)
T ss_dssp EEEEETTBCSSCS-EEEECCCCSSCEEEEEETTTTEEEEEET
T ss_pred EEEEcCccccCCc-eEEeccCCCceeEEEEcCCCCEEEEEEc
Confidence 9999998876422 1223357788999999999998876663
No 51
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.88 E-value=3.9e-21 Score=204.22 Aligned_cols=179 Identities=22% Similarity=0.286 Sum_probs=141.5
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC-----------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC----C
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC-----------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT----G 139 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~-----------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~t----g 139 (768)
.+...++..|++++.|+.|++|+.... .+.+|...|.+++|+|+|++|++++.|++|++||++. .
T Consensus 64 v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~ 143 (330)
T 2hes_X 64 VAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY 143 (330)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCe
Confidence 344567889999999999999998421 3679999999999999999999999999999999943 3
Q ss_pred eEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCC--cEEEEe-cCCCCeEEEEEcCC--CCEEEEEECCe-
Q 004203 140 SCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA--ECIGSR-DFYRPIASIAFHAS--GELLAVASGHK- 213 (768)
Q Consensus 140 ~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg--~~i~~l-~h~~~V~svafSPD--G~~LatgSdd~- 213 (768)
+++..+.+|...|.+++|+| ++.+|++++.|++|++||+.++ +++..+ +|...|.+++|+|+ +.+|++++.|+
T Consensus 144 ~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 144 ECISVLQEHSQDVKHVIWHP-SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp EEEEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred EEEEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe
Confidence 56788999999999999999 9999999999999999999876 455555 58899999999999 67899999655
Q ss_pred EEEEEcCCCccc-----cCCeEeec-CCCCeEEEEEccCCCeEEEEEe
Q 004203 214 LYIWRYNMREET-----SSPRIVLR-TRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 214 I~IWDl~t~~~~-----~~~~~l~~-h~~~V~sVaFSPDG~~LlaS~s 255 (768)
|++||++..... .....+.. |...|.+++|++++ +|++++.
T Consensus 223 v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~ 269 (330)
T 2hes_X 223 VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGA 269 (330)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEET
T ss_pred EEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeC
Confidence 999999764211 00112223 78899999999776 4666554
No 52
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=3.5e-22 Score=217.97 Aligned_cols=232 Identities=11% Similarity=0.105 Sum_probs=156.6
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC---------CCCCCCCCeEEEEECC--------CCCEEEEEeCCCeEEEEeCCCCeEE
Q 004203 80 ARRGLASWVEAESLHHLRPKYC---------PLSPPPRSTIAAAFSP--------DGKTLASTHGDHTVKIIDCQTGSCL 142 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~---------~L~gH~~~VtslafSP--------DG~~LaSgS~DgtVrVWDl~tg~~l 142 (768)
.+..|++++.|++|++||...+ .+.+|.+.|++++|+| ||++|++++.|++|+|||++++.++
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 4567999999999999998765 4789999999999998 8999999999999999999999888
Q ss_pred EEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE--------------------------ecCCCCeEE
Q 004203 143 KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--------------------------RDFYRPIAS 196 (768)
Q Consensus 143 ~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~--------------------------l~h~~~V~s 196 (768)
..+.+|...|.+++|+|++..+|++++.|++|++||+++++.... ..|...+.+
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~ 259 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLAN 259 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSE
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccccee
Confidence 888889999999999995556899999999999999998764322 135567888
Q ss_pred EEEc-CCCCEEEEEECCe-EEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEeeCCcC-C-CCcceeEeecC
Q 004203 197 IAFH-ASGELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLD-S-SESSLTLATSP 272 (768)
Q Consensus 197 vafS-PDG~~LatgSdd~-I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~svwdl~-s-g~~~~~L~t~~ 272 (768)
+.|+ ||++.|++++.++ +++||+....... .+..+...+..+.+.|+++.+.......... . ......+...
T Consensus 260 v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg- 335 (393)
T 4gq1_A 260 VRWIGSDGSGILAMCKSGAWLRWNLFANNDYN---EISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH- 335 (393)
T ss_dssp EEEETTTTCEEEEECTTSEEEEEEC----------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE-
T ss_pred eeeecCCCCEEEEEeCCCCEEEEECccCCCCc---eEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE-
Confidence 8886 8999999999554 9999998876533 4455666777777777654322111100000 0 0000111110
Q ss_pred CcccCCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEe
Q 004203 273 GYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQH 322 (768)
Q Consensus 273 G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~ 322 (768)
+ ....|.+|+..++........ ...++...+|+|||+.|++.-
T Consensus 336 s----~Dg~V~lwd~~~~~~~~~~~~---~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 336 S----QHGLIQLINTYEKDSNSIPIQ---LGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp T----TTTEEEEEETTCTTCCEEEEE---CSSCEEEEEECTTSSEEEEEE
T ss_pred C----CCCEEEEEECCCCcEEEEecC---CCCcEEEEEEcCCCCEEEEEe
Confidence 0 124688888776655443332 344788999999999999853
No 53
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.88 E-value=1e-20 Score=201.51 Aligned_cols=183 Identities=16% Similarity=0.214 Sum_probs=147.5
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEe---c
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH---G 147 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~---g 147 (768)
.+...++..+++++.|+.|++||+.++ .+.+|...|.+++|+||+++|++++.|++|++||+.. +....+. +
T Consensus 82 ~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~ 160 (343)
T 2xzm_R 82 LALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKEN 160 (343)
T ss_dssp EEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTS
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccC
Confidence 334567889999999999999999876 4679999999999999999999999999999999984 3343333 7
Q ss_pred CCCCcEEEEEccCCC----------CEEEEEeCCCeEEEEECCCCcEEEE-ecCCCCeEEEEEcCCCCEEEEEECC-eEE
Q 004203 148 HRRTPWVVRFHPLNP----------TIIASGSLDHEVRLWNASTAECIGS-RDFYRPIASIAFHASGELLAVASGH-KLY 215 (768)
Q Consensus 148 H~g~V~sVafSP~dg----------~lLaSgS~DgtVrLWDl~sg~~i~~-l~h~~~V~svafSPDG~~LatgSdd-~I~ 215 (768)
|...|.+++|+| ++ .++++++.|++|++||.. .+.... ..|...|.+++|+|+|++|++++.+ .|+
T Consensus 161 ~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 161 HSDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp CSSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred CCceeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEE
Confidence 889999999999 54 789999999999999954 444444 4688999999999999999999955 599
Q ss_pred EEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe----eCCcCCCC
Q 004203 216 IWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE----VNDLDSSE 263 (768)
Q Consensus 216 IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s----vwdl~sg~ 263 (768)
+||+...... .....+...|.+++|+|++++++++.. +|++....
T Consensus 239 iwd~~~~~~~---~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 239 IWDILNLTYP---QREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQS 287 (343)
T ss_dssp EEESSCCSSC---SEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCC
T ss_pred EEECCCCccc---ceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCC
Confidence 9999654432 233445667999999999986654432 67766543
No 54
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.88 E-value=1e-20 Score=205.41 Aligned_cols=236 Identities=15% Similarity=0.212 Sum_probs=182.6
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEE
Q 004203 81 RRGLASWVEAESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~L-----~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sV 155 (768)
+..+++++.|+.|++|+..+++. ..|...|++++|+|++++|++++.|+.|++||+++++.+..+.+|...|.++
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 182 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCL 182 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEE
Confidence 45688899999999999988732 2489999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCEEEEEeCCCeEEEEECCC-CcEEEEe-cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEee
Q 004203 156 RFHPLNPTIIASGSLDHEVRLWNAST-AECIGSR-DFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIVL 232 (768)
Q Consensus 156 afSP~dg~lLaSgS~DgtVrLWDl~s-g~~i~~l-~h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~~~~~~l~ 232 (768)
.|++ +++++++.|+.|++||++. +..+..+ .|...|.+++|+|++++|++++.+ .|++||+++..... .+.
T Consensus 183 ~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~---~~~ 256 (401)
T 4aez_A 183 SWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKF---TKT 256 (401)
T ss_dssp EEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEE---EEC
T ss_pred EECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccE---Eec
Confidence 9954 7999999999999999994 4445444 588999999999999999999965 59999999876533 566
Q ss_pred cCCCCeEEEEEccCCCeEEEEEe--------eCCcCCCCcceeEeecC----------Ccc-----cCCCCeEEEecCCC
Q 004203 233 RTRRSLRAVHFHPHAAPLLLTAE--------VNDLDSSESSLTLATSP----------GYW-----RYPPPVICMAGAHS 289 (768)
Q Consensus 233 ~h~~~V~sVaFSPDG~~LlaS~s--------vwdl~sg~~~~~L~t~~----------G~~-----~~p~~~V~l~d~~s 289 (768)
.|...|.+++|+|++..+++++. +|+++.+.....+.... +.. .+....+.+|+..+
T Consensus 257 ~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 257 NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 78999999999999887777642 77877665443332111 100 11235566666554
Q ss_pred CCCCCcccccCCCCCCceEEEEecCCCEEEEEec
Q 004203 290 SSHPGLAEEVPLITPPFLRPSFVRDDERISLQHT 323 (768)
Q Consensus 290 ~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~ 323 (768)
+....... ......++....|+|||+.|+....
T Consensus 337 ~~~~~~~~-~~~h~~~v~~~~~s~dg~~l~s~~~ 369 (401)
T 4aez_A 337 SGLTKQVD-IPAHDTRVLYSALSPDGRILSTAAS 369 (401)
T ss_dssp TEEEEEEE-EECCSSCCCEEEECTTSSEEEEECT
T ss_pred ccceeEEE-ecCCCCCEEEEEECCCCCEEEEEeC
Confidence 33222221 2234456778899999999987544
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.88 E-value=8.1e-21 Score=200.11 Aligned_cols=178 Identities=15% Similarity=0.150 Sum_probs=147.5
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEE--EecC
Q 004203 77 GRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV--LHGH 148 (768)
Q Consensus 77 ~~d~g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~--l~gH 148 (768)
...++..|++++.|+.|++||..+. .+.+|...|.+++|+|++++|++++.|+.|++||+++++.... +..|
T Consensus 16 ~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 95 (372)
T 1k8k_C 16 WNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRI 95 (372)
T ss_dssp ECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCC
T ss_pred ECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecC
Confidence 3457788999999999999999876 3568999999999999999999999999999999999875544 3678
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE---EEE--ecCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCC
Q 004203 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC---IGS--RDFYRPIASIAFHASGELLAVASGH-KLYIWRYNMR 222 (768)
Q Consensus 149 ~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~---i~~--l~h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~ 222 (768)
...|.+++|+| ++++|++++.|+.|++||++.++. ... ..|...|.+++|+|++++|++++.+ .|++||++..
T Consensus 96 ~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 174 (372)
T 1k8k_C 96 NRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIK 174 (372)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCT
T ss_pred CCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccc
Confidence 99999999999 899999999999999999998763 222 3478899999999999999999954 5999997521
Q ss_pred c---------------cccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 223 E---------------ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 223 ~---------------~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
. .......+..|...|.+++|+|+++++++++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 222 (372)
T 1k8k_C 175 EVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH 222 (372)
T ss_dssp TTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET
T ss_pred cccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC
Confidence 1 00112234478889999999999998877664
No 56
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.88 E-value=3.7e-21 Score=201.04 Aligned_cols=176 Identities=13% Similarity=0.177 Sum_probs=145.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEeCCCCe--EEEEEecCC
Q 004203 80 ARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS--CLKVLHGHR 149 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~------L~gH~~~VtslafSPD--G~~LaSgS~DgtVrVWDl~tg~--~l~~l~gH~ 149 (768)
.+..|++++.|++|++||+.++. +.+|...|.+++|+|+ |++|++++.|++|++||++++. ....+.+|.
T Consensus 66 ~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~ 145 (297)
T 2pm7_B 66 FGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHA 145 (297)
T ss_dssp GCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCS
T ss_pred cCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeeccc
Confidence 37899999999999999998652 4679999999999997 8999999999999999998763 246778999
Q ss_pred CCcEEEEEccCC------------CCEEEEEeCCCeEEEEECCCCc----EEEEe-cCCCCeEEEEEcCCC---CEEEEE
Q 004203 150 RTPWVVRFHPLN------------PTIIASGSLDHEVRLWNASTAE----CIGSR-DFYRPIASIAFHASG---ELLAVA 209 (768)
Q Consensus 150 g~V~sVafSP~d------------g~lLaSgS~DgtVrLWDl~sg~----~i~~l-~h~~~V~svafSPDG---~~Latg 209 (768)
..|.+++|+|+. +++|++++.|++|+|||+++++ ....+ .|...|.+++|+|++ ++|+++
T Consensus 146 ~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp SCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEE
Confidence 999999999931 5799999999999999998865 34444 588999999999995 789999
Q ss_pred ECC-eEEEEEcCCCccccCCeEe--ecCCCCeEEEEEccCCCeEEEEEe
Q 004203 210 SGH-KLYIWRYNMREETSSPRIV--LRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 210 Sdd-~I~IWDl~t~~~~~~~~~l--~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
+.| .|++||++..........+ ..|...|.+++|+|+|++|++++.
T Consensus 226 s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 226 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (297)
T ss_dssp ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET
T ss_pred ECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC
Confidence 955 4999999875321101112 356788999999999998887765
No 57
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.88 E-value=5.7e-21 Score=199.71 Aligned_cols=227 Identities=15% Similarity=0.152 Sum_probs=169.0
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC-----CCCCCCCeEEEE------ECCCCCEEEEEeCCCeEEEEeCCCCe-EEEEEecC
Q 004203 81 RRGLASWVEAESLHHLRPKYCP-----LSPPPRSTIAAA------FSPDGKTLASTHGDHTVKIIDCQTGS-CLKVLHGH 148 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~-----L~gH~~~Vtsla------fSPDG~~LaSgS~DgtVrVWDl~tg~-~l~~l~gH 148 (768)
+..|++++.|+.|++||....+ +.+|...|.+++ |+|++++|++++.|+.|++||+++++ .+..+..|
T Consensus 80 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 80 QRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp TCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC
T ss_pred CceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc
Confidence 6889999999999999998653 678999999995 57899999999999999999999987 67888766
Q ss_pred CC----CcEEEE----EccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcC---CCCEEEEEEC-CeEEE
Q 004203 149 RR----TPWVVR----FHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHA---SGELLAVASG-HKLYI 216 (768)
Q Consensus 149 ~g----~V~sVa----fSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSP---DG~~LatgSd-d~I~I 216 (768)
.+ .++++. |+| +++++++++.|+.|++||+++++......+...|.+++|+| ++.+|++++. +.|++
T Consensus 160 ~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 238 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHV 238 (357)
T ss_dssp TTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEE
T ss_pred CCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEE
Confidence 55 788888 678 99999999999999999999999888888999999999999 9999999985 55999
Q ss_pred EEcCCCccccCCe--EeecCCCCeEEEEEccCCCe-EEEEEe-----eCCcCCCCcceeEeecCCcccCCCCeEEEecCC
Q 004203 217 WRYNMREETSSPR--IVLRTRRSLRAVHFHPHAAP-LLLTAE-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAH 288 (768)
Q Consensus 217 WDl~t~~~~~~~~--~l~~h~~~V~sVaFSPDG~~-LlaS~s-----vwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~ 288 (768)
||+++.+...... ....|...|.+++|+|+++. +++++. +|+++......... ..+.........
T Consensus 239 ~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~g~~~~~~~~~------ 311 (357)
T 3i2n_A 239 FDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKD-SEGIEMGVAGSV------ 311 (357)
T ss_dssp EEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CC-TTSCCCCCCCEE------
T ss_pred EeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccccc-CCCCcccccccc------
Confidence 9998876533111 22378999999999999994 555443 56665433221110 111100000000
Q ss_pred CCCCCCcccccCCCCCCceEEEEecCCCEEEE
Q 004203 289 SSSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (768)
Q Consensus 289 s~d~~~L~~~~~~~slpil~psFSpDG~rIv~ 320 (768)
...........++...+|+||++.+++
T Consensus 312 -----~~~~~~~~~~~~v~~~~~s~~~~~l~~ 338 (357)
T 3i2n_A 312 -----SLLQNVTLSTQPISSLDWSPDKRGLCV 338 (357)
T ss_dssp -----EEEEEEECCSSCEEEEEECSSSTTEEE
T ss_pred -----ceeeccccCCCCeeEEEEcCCCCeEEE
Confidence 011112223446778999999999985
No 58
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.88 E-value=3.6e-20 Score=202.65 Aligned_cols=237 Identities=14% Similarity=0.175 Sum_probs=182.8
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEE
Q 004203 81 RRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~s 154 (768)
+..|+.+ .|++|++||..+++ +.+|...|++++|+|||++|++|+.|++|+|||+++++++..+.+|...+.+
T Consensus 116 ~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~ 194 (420)
T 4gga_A 116 GNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGS 194 (420)
T ss_dssp TSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred CCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEE
Confidence 3455544 59999999999873 4578899999999999999999999999999999999999999999999988
Q ss_pred EEEccCCCCEEEEEeCCCeEEEEECCCCcE-EEE-ecCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCcccc-CCeE
Q 004203 155 VRFHPLNPTIIASGSLDHEVRLWNASTAEC-IGS-RDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETS-SPRI 230 (768)
Q Consensus 155 VafSP~dg~lLaSgS~DgtVrLWDl~sg~~-i~~-l~h~~~V~svafSPDG~~LatgSdd~-I~IWDl~t~~~~~-~~~~ 230 (768)
+.|+ +.++++|+.|+.+++||...... +.. ..|...+..+.|+|++++|++++.++ +++||..+++... ....
T Consensus 195 ~s~~---~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~ 271 (420)
T 4gga_A 195 LSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQT 271 (420)
T ss_dssp EEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEE
T ss_pred EeeC---CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeee
Confidence 8775 58999999999999999987543 333 45889999999999999999999655 9999998876432 2334
Q ss_pred eecCCCCeEEEEEccCCCeEEEEEe--------eCCcCCCCcceeEeecCCcc---------------cCCCCeEEEecC
Q 004203 231 VLRTRRSLRAVHFHPHAAPLLLTAE--------VNDLDSSESSLTLATSPGYW---------------RYPPPVICMAGA 287 (768)
Q Consensus 231 l~~h~~~V~sVaFSPDG~~LlaS~s--------vwdl~sg~~~~~L~t~~G~~---------------~~p~~~V~l~d~ 287 (768)
...|...|.+++|+|++..+++++. +|++..+.....+....... .+....|.+|+.
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~ 351 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKY 351 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEET
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEEC
Confidence 5668899999999999887776542 77777654433332211110 113456888887
Q ss_pred CCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecC
Q 004203 288 HSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 288 ~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d 324 (768)
.+...... ..+...+++..+|+|||+.|+..-.|
T Consensus 352 ~~~~~v~~---l~gH~~~V~~l~~spdg~~l~S~s~D 385 (420)
T 4gga_A 352 PTMAKVAE---LKGHTSRVLSLTMSPDGATVASAAAD 385 (420)
T ss_dssp TTCCEEEE---ECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred CCCcEEEE---EcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 66544332 34456688899999999999875443
No 59
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.88 E-value=3.5e-20 Score=208.47 Aligned_cols=173 Identities=28% Similarity=0.405 Sum_probs=150.5
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC---CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCc
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTP 152 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~---~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V 152 (768)
+...++..+++++.|+.|++||.... .+.+|...|.+++|+|||++|++++.|+.|++||. +++.+..+.+|...|
T Consensus 310 ~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v 388 (577)
T 2ymu_A 310 AFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV 388 (577)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCE
T ss_pred EECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCe
Confidence 34557889999999999999998765 46789999999999999999999999999999995 678889999999999
Q ss_pred EEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE-ecCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCeE
Q 004203 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-RDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRI 230 (768)
Q Consensus 153 ~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~-l~h~~~V~svafSPDG~~LatgSdd~-I~IWDl~t~~~~~~~~~ 230 (768)
.+++|+| ++++|++++.|+.|++||.. ++.+.. ..|...|.+++|+||+++|++++.++ |++||.... . ...
T Consensus 389 ~~~~~s~-dg~~l~~~~~d~~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~-~---~~~ 462 (577)
T 2ymu_A 389 RGVAFSP-DGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQ-L---LQT 462 (577)
T ss_dssp EEEEECT-TSSCEEEEETTSEEEEECTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC-E---EEE
T ss_pred EEEEECC-CCCEEEEEeCCCEEEEEeCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCC-E---EEE
Confidence 9999999 99999999999999999964 455554 56889999999999999999999655 999997543 2 235
Q ss_pred eecCCCCeEEEEEccCCCeEEEEEe
Q 004203 231 VLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 231 l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
+..|...|++++|+||+++|++++.
T Consensus 463 ~~~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEET
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 6789999999999999998877654
No 60
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1e-20 Score=201.63 Aligned_cols=239 Identities=12% Similarity=0.154 Sum_probs=179.2
Q ss_pred EecCCC-EEEEEeCCCeEEEEeC----CCCC--------------CCC------CCCCeEEEEECCCCCEEEEEeCCCeE
Q 004203 77 GRDARR-GLASWVEAESLHHLRP----KYCP--------------LSP------PPRSTIAAAFSPDGKTLASTHGDHTV 131 (768)
Q Consensus 77 ~~d~g~-~LvSgs~DgsIrlWd~----~t~~--------------L~g------H~~~VtslafSPDG~~LaSgS~DgtV 131 (768)
...++. .|++++.|+.|++|++ .+++ +.+ |...|++++|+|++++|++++.|+.|
T Consensus 53 ~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 132 (425)
T 1r5m_A 53 WNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGEL 132 (425)
T ss_dssp ECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCE
T ss_pred ECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeE
Confidence 345566 9999999999999999 6443 122 67899999999999999999999999
Q ss_pred EEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCC---------------eE
Q 004203 132 KIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-YRP---------------IA 195 (768)
Q Consensus 132 rVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h-~~~---------------V~ 195 (768)
++|| .+++.+..+.+|...|.+++|+| ++++|++++.|+.|++||+++++.+..+.. ... +.
T Consensus 133 ~i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (425)
T 1r5m_A 133 RLWN-KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGV 210 (425)
T ss_dssp EEEE-TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBS
T ss_pred EEEe-CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceee
Confidence 9999 67888999999999999999999 999999999999999999999998887653 333 89
Q ss_pred EEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEee
Q 004203 196 SIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLAT 270 (768)
Q Consensus 196 svafSPDG~~LatgSdd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t 270 (768)
+++|+|++.+++.+.++.|++||+++.+.. ..+..|...|.+++|+|+++++++++. +|+++.++....+..
T Consensus 211 ~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 287 (425)
T 1r5m_A 211 DVEWVDDDKFVIPGPKGAIFVYQITEKTPT---GKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG 287 (425)
T ss_dssp CCEEEETTEEEEECGGGCEEEEETTCSSCS---EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECC
T ss_pred EEEEcCCCEEEEEcCCCeEEEEEcCCCcee---eeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecC
Confidence 999999876444444666999999987643 356678999999999999998887764 777776554444432
Q ss_pred cCCccc-------------CCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEec
Q 004203 271 SPGYWR-------------YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHT 323 (768)
Q Consensus 271 ~~G~~~-------------~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~ 323 (768)
+.+... .....+.+|+.......... .....++....|+||++.|+....
T Consensus 288 ~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 288 HSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALS---IVDGVPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp CSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEE---ECTTCCEEEEEECTTSSEEEEEET
T ss_pred CCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEec---ccCCccEEEEEEcCCCCEEEEEEC
Confidence 222110 01245666665544332222 223456778999999999887654
No 61
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.87 E-value=9.9e-21 Score=197.85 Aligned_cols=211 Identities=16% Similarity=0.213 Sum_probs=160.3
Q ss_pred CCEEEEEeCCCeEEEEeCCC-C-----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEE
Q 004203 81 RRGLASWVEAESLHHLRPKY-C-----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t-~-----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~s 154 (768)
+..|++++.|+.|++||..+ + .+.+|...|++++|+|++++|++++.|+.|++||+++++.+. +.+|...|.+
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~ 132 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKT 132 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEE
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEE
Confidence 58999999999999999986 2 466899999999999999999999999999999999998766 5679999999
Q ss_pred EEE--ccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC----------------------------------------
Q 004203 155 VRF--HPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYR---------------------------------------- 192 (768)
Q Consensus 155 Vaf--SP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~---------------------------------------- 192 (768)
++| +| ++.+|++++.|+.|++||+++++.+..+....
T Consensus 133 ~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 211 (368)
T 3mmy_A 133 IHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPL 211 (368)
T ss_dssp EEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSC
T ss_pred EEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccc
Confidence 999 88 88999999999999999999887655544322
Q ss_pred --CeEEEEEcCCCCE----EEEEECC-eEEEEEcCCCccccCCeEeecCCC------------CeEEEEEccCCCeEEEE
Q 004203 193 --PIASIAFHASGEL----LAVASGH-KLYIWRYNMREETSSPRIVLRTRR------------SLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 193 --~V~svafSPDG~~----LatgSdd-~I~IWDl~t~~~~~~~~~l~~h~~------------~V~sVaFSPDG~~LlaS 253 (768)
.+.++++.++... +++++.+ .|++||++..........+..|.. .|.+++|+|++++|+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 291 (368)
T 3mmy_A 212 KHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATV 291 (368)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEE
T ss_pred cCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEE
Confidence 3344455444433 7777754 599999988754222334555544 79999999999988877
Q ss_pred Ee-----eCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecC
Q 004203 254 AE-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 254 ~s-----vwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d 324 (768)
+. +|++..+. .+... .....++...+|+|||+.|+....+
T Consensus 292 ~~dg~i~iwd~~~~~---~~~~~----------------------------~~~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 292 GSDGRFSFWDKDART---KLKTS----------------------------EQLDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp ETTSCEEEEETTTTE---EEEEC----------------------------CCCSSCEEEEEECTTSSCEEEEECC
T ss_pred ccCCeEEEEECCCCc---EEEEe----------------------------cCCCCCceEEEECCCCCeEEEEecc
Confidence 64 44443221 11111 1223456789999999999986543
No 62
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.87 E-value=1.2e-19 Score=192.79 Aligned_cols=246 Identities=13% Similarity=0.110 Sum_probs=184.8
Q ss_pred EEEec-CCCEEEEEeCCCeEEEEeCCCCCC-----------------CCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEe
Q 004203 75 EAGRD-ARRGLASWVEAESLHHLRPKYCPL-----------------SPPPRSTIAAAFSP-DGKTLASTHGDHTVKIID 135 (768)
Q Consensus 75 ~a~~d-~g~~LvSgs~DgsIrlWd~~t~~L-----------------~gH~~~VtslafSP-DG~~LaSgS~DgtVrVWD 135 (768)
.+... ++..|++++.|+.|++||..+... .+|...|.+++|+| ++++|++++.|+.|++||
T Consensus 49 ~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 128 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWD 128 (408)
T ss_dssp EEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEE
T ss_pred EEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEee
Confidence 33445 788999999999999999986521 25999999999999 888999999999999999
Q ss_pred CCCCeEEEEEecCCCCcEEEEEccC--CCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCC-EEEEEEC
Q 004203 136 CQTGSCLKVLHGHRRTPWVVRFHPL--NPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGE-LLAVASG 211 (768)
Q Consensus 136 l~tg~~l~~l~gH~g~V~sVafSP~--dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~-~LatgSd 211 (768)
+++++....+. +...+.++.|+|. ++.++++++.|+.|++||+++++.+..+. |...|.+++|+|+++ +|++++.
T Consensus 129 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~ 207 (408)
T 4a11_B 129 TNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASA 207 (408)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEET
T ss_pred CCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcC
Confidence 99999888886 6778999999984 23399999999999999999998877765 888999999999998 5888885
Q ss_pred C-eEEEEEcCCCcccc-------------CCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecC
Q 004203 212 H-KLYIWRYNMREETS-------------SPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSP 272 (768)
Q Consensus 212 d-~I~IWDl~t~~~~~-------------~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~ 272 (768)
+ .|++||+++..... .......|...|.+++|+|+++++++++. +|++..++.........
T Consensus 208 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 287 (408)
T 4a11_B 208 DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKV 287 (408)
T ss_dssp TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCC
T ss_pred CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccc
Confidence 4 59999998765211 00111467889999999999998888765 77777654322211100
Q ss_pred Cc-----------------c--cCCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecC
Q 004203 273 GY-----------------W--RYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 273 G~-----------------~--~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d 324 (768)
.. . ......+.+|+...+...... .....++....|+||++.|+....|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s~~~d 355 (408)
T 4a11_B 288 CNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML---KGHYKTVDCCVFQSNFQELYSGSRD 355 (408)
T ss_dssp CCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE---CCCSSCEEEEEEETTTTEEEEEETT
T ss_pred cccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee---ccCCCeEEEEEEcCCCCEEEEECCC
Confidence 00 0 001245677776655433332 3345577789999999999875443
No 63
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.87 E-value=2.5e-20 Score=193.93 Aligned_cols=177 Identities=16% Similarity=0.177 Sum_probs=153.9
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCC-----CCCCCCCCeEEEEECCCC--CEEEEEeCCCeEEEEeCCCCeEEEEEecCCC
Q 004203 78 RDARRGLASWVEAESLHHLRPKYC-----PLSPPPRSTIAAAFSPDG--KTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (768)
Q Consensus 78 ~d~g~~LvSgs~DgsIrlWd~~t~-----~L~gH~~~VtslafSPDG--~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g 150 (768)
...+..+++++.|+.+++||.... .+.+|...|..++|++++ .++++++.|+.|++||+++++.+..+.+|.+
T Consensus 137 ~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~ 216 (340)
T 4aow_A 137 SSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG 216 (340)
T ss_dssp CTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred eecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCC
Confidence 345678999999999999998754 467899999999999865 5788999999999999999999999999999
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccC---
Q 004203 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSS--- 227 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSdd~I~IWDl~t~~~~~~--- 227 (768)
.|++++|+| ++++|++++.|++|++||+++++++..+.+...+.+++|+|++.+++.+.++.|++||+++......
T Consensus 217 ~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~ 295 (340)
T 4aow_A 217 YLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQ 295 (340)
T ss_dssp CEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECC
T ss_pred cEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccc
Confidence 999999999 9999999999999999999999999999888999999999999988888888899999987654220
Q ss_pred ---CeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 228 ---PRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 228 ---~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
......|...|++++|+|||++|++++.
T Consensus 296 ~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 326 (340)
T 4aow_A 296 EVISTSSKAEPPQCTSLAWSADGQTLFAGYT 326 (340)
T ss_dssp C-------CCCCCEEEEEECTTSSEEEEEET
T ss_pred cceeeeccCCCCCEEEEEECCCCCEEEEEeC
Confidence 1123457889999999999998887664
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.87 E-value=9.3e-21 Score=204.21 Aligned_cols=163 Identities=11% Similarity=0.106 Sum_probs=134.9
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEE
Q 004203 79 DARRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~~----L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~s 154 (768)
.++..|++++.|+.|++||..+.+ +..| ..+....|++++++|++++.|+.|++||+++++....+.+|.+.|.+
T Consensus 66 ~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 144 (420)
T 3vl1_A 66 KVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITK 144 (420)
T ss_dssp EEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEE
T ss_pred ecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEE
Confidence 467789999999999999998762 3344 44556678999999999999999999999999998888999999999
Q ss_pred EEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCeEee
Q 004203 155 VRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVL 232 (768)
Q Consensus 155 VafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSdd~-I~IWDl~t~~~~~~~~~l~ 232 (768)
++|+| ++++|++++.|++|++||+++++.+..+. |...|.+++|+|++++|++++.++ |++||+++++.........
T Consensus 145 ~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~ 223 (420)
T 3vl1_A 145 LKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKE 223 (420)
T ss_dssp EEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTT
T ss_pred EEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCC
Confidence 99999 89999999999999999999998877764 889999999999999999999655 9999999887543111111
Q ss_pred cCCCCeEEEEE
Q 004203 233 RTRRSLRAVHF 243 (768)
Q Consensus 233 ~h~~~V~sVaF 243 (768)
.+...|.++.|
T Consensus 224 ~~~~~v~~~~~ 234 (420)
T 3vl1_A 224 NPHDGVNSIAL 234 (420)
T ss_dssp BTTCCEEEEEE
T ss_pred CCCCCccEEEE
Confidence 23445555554
No 65
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.87 E-value=1.3e-21 Score=208.33 Aligned_cols=179 Identities=16% Similarity=0.152 Sum_probs=144.4
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCC-------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe---EEEE
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYCP-------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS---CLKV 144 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~~-------L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~---~l~~ 144 (768)
.+...++..|++++.|+.|++||..+.. +.+|...|.+++|+|++++|++++.|+.|++||+++++ ....
T Consensus 61 ~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 140 (377)
T 3dwl_C 61 VDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKH 140 (377)
T ss_dssp EEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEE
T ss_pred EEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeE
Confidence 3445577899999999999999998753 66899999999999999999999999999999999887 4678
Q ss_pred Eec-CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC------------------CcEEEEecCCCCeEEEEEcCCCCE
Q 004203 145 LHG-HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST------------------AECIGSRDFYRPIASIAFHASGEL 205 (768)
Q Consensus 145 l~g-H~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~s------------------g~~i~~l~h~~~V~svafSPDG~~ 205 (768)
+.+ |...|.+++|+| ++++|++++.|++|++||++. ++++..+.|...|.+++|+|++++
T Consensus 141 ~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 141 LKRPLRSTILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNA 219 (377)
T ss_dssp ECSSCCSCEEEEEECT-TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSC
T ss_pred eecccCCCeEEEEEcC-CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCE
Confidence 887 999999999999 999999999999999999952 445555678889999999999999
Q ss_pred EEEEECC-eEEEEEcCCCcccc-CCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 206 LAVASGH-KLYIWRYNMREETS-SPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 206 LatgSdd-~I~IWDl~t~~~~~-~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
|++++.+ .|++||+.+++... ....+..|...|.+++|+|+|++|++++
T Consensus 220 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 220 LAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp EEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEES
T ss_pred EEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEc
Confidence 9999955 59999999887511 0235677889999999999999766553
No 66
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.87 E-value=1.7e-20 Score=203.75 Aligned_cols=182 Identities=20% Similarity=0.288 Sum_probs=156.7
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEE
Q 004203 80 ARRGLASWVEAESLHHLRPKYC-----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~-----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~s 154 (768)
++..+++++.|+.|++||+... .+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+|...|.+
T Consensus 185 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~ 264 (401)
T 4aez_A 185 NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKA 264 (401)
T ss_dssp ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCE
T ss_pred CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEE
Confidence 3567888899999999998743 46789999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCCEEEEEe--CCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE---CCeEEEEEcCCCccccCCe
Q 004203 155 VRFHPLNPTIIASGS--LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS---GHKLYIWRYNMREETSSPR 229 (768)
Q Consensus 155 VafSP~dg~lLaSgS--~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgS---dd~I~IWDl~t~~~~~~~~ 229 (768)
++|+|++..++++++ .|+.|++||+++++++..+.+...+.+++|+|++++|++++ ++.|++||+.++.... ..
T Consensus 265 ~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~-~~ 343 (401)
T 4aez_A 265 VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTK-QV 343 (401)
T ss_dssp EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEE-EE
T ss_pred EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcccee-EE
Confidence 999996667888876 79999999999999999999999999999999999999965 4569999998865433 23
Q ss_pred EeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCC
Q 004203 230 IVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSS 262 (768)
Q Consensus 230 ~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg 262 (768)
.+..|...|.+++|+|+|++|++++. +|++..+
T Consensus 344 ~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 344 DIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp EEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred EecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 45678999999999999998877654 5666544
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.87 E-value=4.3e-20 Score=202.76 Aligned_cols=233 Identities=17% Similarity=0.205 Sum_probs=178.6
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEE
Q 004203 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sV 155 (768)
++..+++++.|+.|++||..++ .+.+|.+.|.+++|++++ +|++++.|++|++||+++++++..+.+|.+.|.++
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l 209 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL 209 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEE
Confidence 4679999999999999999877 477999999999999988 99999999999999999999999999999999999
Q ss_pred EEcc-CCCCEEEEEeCCCeEEEEECCCCcEE-----------------------EE-ecCCCCeEEEEEcCCCCEEEEEE
Q 004203 156 RFHP-LNPTIIASGSLDHEVRLWNASTAECI-----------------------GS-RDFYRPIASIAFHASGELLAVAS 210 (768)
Q Consensus 156 afSP-~dg~lLaSgS~DgtVrLWDl~sg~~i-----------------------~~-l~h~~~V~svafSPDG~~LatgS 210 (768)
+|++ .++.++++++.|++|++||+++++.. .. ..|...+.++ ++++++|++++
T Consensus 210 ~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~ 287 (464)
T 3v7d_B 210 DIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGS 287 (464)
T ss_dssp EEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEE
T ss_pred EEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEe
Confidence 9984 26789999999999999999987532 12 2466666665 67899999999
Q ss_pred CC-eEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCccc--------
Q 004203 211 GH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR-------- 276 (768)
Q Consensus 211 dd-~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~-------- 276 (768)
.+ .|++||+++.+... .+..|...|.+++|+|+++++++++. +|+++.++....+..+.+...
T Consensus 288 ~d~~i~vwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 364 (464)
T 3v7d_B 288 YDNTLIVWDVAQMKCLY---ILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKF 364 (464)
T ss_dssp TTSCEEEEETTTTEEEE---EECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSE
T ss_pred CCCeEEEEECCCCcEEE---EecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCE
Confidence 55 59999999887543 56678999999999999998887765 778776544433332222110
Q ss_pred ----CCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEe
Q 004203 277 ----YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQH 322 (768)
Q Consensus 277 ----~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~ 322 (768)
.....+.+|+........... .........|++|++.++...
T Consensus 365 l~s~s~dg~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 365 LVSAAADGSIRGWDANDYSRKFSYH----HTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEE----CTTCCCEEEEEECSSEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCceeeeec----CCCCccEEEEEeCCCEEEEec
Confidence 123456667765533221111 122344678999999888754
No 68
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.4e-21 Score=221.96 Aligned_cols=170 Identities=10% Similarity=0.033 Sum_probs=144.0
Q ss_pred CCEEEEEeCCCeEEEEeCCCC---------------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe-EEEE
Q 004203 81 RRGLASWVEAESLHHLRPKYC---------------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS-CLKV 144 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~---------------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~-~l~~ 144 (768)
+..|++++.|++|++||+... .+.+|...|++++|+++ ..|++|+.||+|++||+++++ ....
T Consensus 225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~ 303 (524)
T 2j04_B 225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFY 303 (524)
T ss_dssp SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEE
T ss_pred CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEE
Confidence 578999999999999998754 34679999999999986 489999999999999999774 4567
Q ss_pred EecCCCCcEEE--EEccCCC-CEEEEEeCCCeEEEEECCCCcEEEEe-cCC--CCeEEEEEcCCCCEEEEEECC-eEEEE
Q 004203 145 LHGHRRTPWVV--RFHPLNP-TIIASGSLDHEVRLWNASTAECIGSR-DFY--RPIASIAFHASGELLAVASGH-KLYIW 217 (768)
Q Consensus 145 l~gH~g~V~sV--afSP~dg-~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~--~~V~svafSPDG~~LatgSdd-~I~IW 217 (768)
+.+|.+.|++| .|+| ++ .+|++++.|++|+|||++++++...+ .|. ..|.+++|+|+++.|++++++ .|++|
T Consensus 304 ~~~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lw 382 (524)
T 2j04_B 304 DQVHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAV 382 (524)
T ss_dssp EECSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEE
T ss_pred eecccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEE
Confidence 89999999999 5677 76 89999999999999999988765554 343 357899999999999988855 59999
Q ss_pred EcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 218 RYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 218 Dl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
|+++.... ..+.+|...|++|+|+|+|++|++++.
T Consensus 383 d~~~~~~~---~~l~gH~~~V~sva~Sp~g~~l~Sgs~ 417 (524)
T 2j04_B 383 PSRAAFAV---HPLVSRETTITAIGVSRLHPMVLAGSA 417 (524)
T ss_dssp ETTCTTCC---EEEEECSSCEEEEECCSSCCBCEEEET
T ss_pred ECcccccc---eeeecCCCceEEEEeCCCCCeEEEEEC
Confidence 99987643 356789999999999999998887765
No 69
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.87 E-value=3.8e-20 Score=193.50 Aligned_cols=218 Identities=15% Similarity=0.212 Sum_probs=170.1
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC
Q 004203 102 PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST 181 (768)
Q Consensus 102 ~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~s 181 (768)
++.+|.+.|++++|+||+++|++++.|+.|++||+.+++.+..+.+|.+.|.+++|+| ++++|++++.|+.|++||+.+
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTT
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC
Confidence 3578999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CcEEEEecCCCCeEEEEEcCCCCEEEEEECC------eEEEEEcCCCcccc--------CCeEeecCCC--CeEEEEEcc
Q 004203 182 AECIGSRDFYRPIASIAFHASGELLAVASGH------KLYIWRYNMREETS--------SPRIVLRTRR--SLRAVHFHP 245 (768)
Q Consensus 182 g~~i~~l~h~~~V~svafSPDG~~LatgSdd------~I~IWDl~t~~~~~--------~~~~l~~h~~--~V~sVaFSP 245 (768)
++.+..+.+...+.+++|+|++++|++++++ .|++||+....... ....+..+.. .+.+++|+|
T Consensus 106 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (369)
T 3zwl_B 106 GQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWST 185 (369)
T ss_dssp CCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECG
T ss_pred CcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcC
Confidence 9999998899999999999999999999865 59999998765322 1223344444 899999999
Q ss_pred CCCeEEEEEe-----eCCcCC-CCcceeEeecCCccc--------------CCCCeEEEecCCCCCCCCcccccCCCCCC
Q 004203 246 HAAPLLLTAE-----VNDLDS-SESSLTLATSPGYWR--------------YPPPVICMAGAHSSSHPGLAEEVPLITPP 305 (768)
Q Consensus 246 DG~~LlaS~s-----vwdl~s-g~~~~~L~t~~G~~~--------------~p~~~V~l~d~~s~d~~~L~~~~~~~slp 305 (768)
+++++++++. +|+++. ......+....+... .....+.+|+........... ...+
T Consensus 186 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~ 261 (369)
T 3zwl_B 186 KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE----TDCP 261 (369)
T ss_dssp GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----CSSC
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec----CCCC
Confidence 9998887654 777765 222223322221110 012456666655544333222 3445
Q ss_pred ceEEEEecCCCEEEEEecC
Q 004203 306 FLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 306 il~psFSpDG~rIv~~~~d 324 (768)
+....|+++++.+++...+
T Consensus 262 ~~~~~~~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 262 LNTAVITPLKEFIILGGGQ 280 (369)
T ss_dssp EEEEEECSSSSEEEEEECC
T ss_pred ceeEEecCCCceEEEeecC
Confidence 6688999999999986543
No 70
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.87 E-value=3.4e-20 Score=197.71 Aligned_cols=245 Identities=11% Similarity=0.082 Sum_probs=184.3
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeCCCC---CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCC
Q 004203 74 FEAGRDARRGLASWVEAESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (768)
Q Consensus 74 ~~a~~d~g~~LvSgs~DgsIrlWd~~t~---~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g 150 (768)
..+...++..|++++.|+.|++||.... .+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..+..
T Consensus 113 ~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 192 (425)
T 1r5m_A 113 CLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKET 192 (425)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecccc
Confidence 3344567889999999999999995433 4778999999999999999999999999999999999999999988877
Q ss_pred C---------------cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEECC-e
Q 004203 151 T---------------PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGH-K 213 (768)
Q Consensus 151 ~---------------V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~~LatgSdd-~ 213 (768)
. +.++.|+| + ..+++++.|+.|++||+++++.+..+ .|...|.+++|+|++++|++++.+ .
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 270 (425)
T 1r5m_A 193 GGSSINAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGT 270 (425)
T ss_dssp -------------CCCBSCCEEEE-T-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred CccceeeccccCCcceeeEEEEcC-C-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCE
Confidence 7 99999999 5 56889999999999999998887766 588899999999999999999955 5
Q ss_pred EEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCccc------------
Q 004203 214 LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR------------ 276 (768)
Q Consensus 214 I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~------------ 276 (768)
|++||+++.+.. ..+..|...|.++.|+|++ .+++++. +|+++.+.....+....+...
T Consensus 271 i~i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 346 (425)
T 1r5m_A 271 LRIWHGGNGNSQ---NCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYA 346 (425)
T ss_dssp EEEECSSSBSCS---EEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEE
T ss_pred EEEEECCCCccc---eEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEE
Confidence 999999887643 3566788999999999999 6666554 777766544433332221110
Q ss_pred --CCCCeEEEecCCCCCC-----------------CCcccccCCCCC--CceEEEEecCCCEEEEEecC
Q 004203 277 --YPPPVICMAGAHSSSH-----------------PGLAEEVPLITP--PFLRPSFVRDDERISLQHTE 324 (768)
Q Consensus 277 --~p~~~V~l~d~~s~d~-----------------~~L~~~~~~~sl--pil~psFSpDG~rIv~~~~d 324 (768)
.....+.+|+...... ..+......... ++....|++|++.|+....+
T Consensus 347 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 415 (425)
T 1r5m_A 347 VAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL 415 (425)
T ss_dssp EEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS
T ss_pred EEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC
Confidence 0123455666543220 002222233333 67789999999998876543
No 71
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.4e-20 Score=201.83 Aligned_cols=220 Identities=16% Similarity=0.197 Sum_probs=163.3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC----CeEEEEEecCC
Q 004203 80 ARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT----GSCLKVLHGHR 149 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~t----g~~l~~l~gH~ 149 (768)
.+..+++++.|+.|++||..+.. ...|...|++++|+|++++|++++.|+.|++||+.+ .+.+..+.+|.
T Consensus 34 ~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~ 113 (416)
T 2pm9_A 34 SGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHS 113 (416)
T ss_dssp SSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSS
T ss_pred CcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCc
Confidence 33344444899999999998652 246899999999999999999999999999999988 45788899999
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCc------EEEE----ecCCCCeEEEEEcCC-CCEEEEEECC-eEEEE
Q 004203 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAE------CIGS----RDFYRPIASIAFHAS-GELLAVASGH-KLYIW 217 (768)
Q Consensus 150 g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~------~i~~----l~h~~~V~svafSPD-G~~LatgSdd-~I~IW 217 (768)
+.|.+++|+|+++++|++++.|+.|++||+++++ .... ..|...|.+++|+|+ +.+|++++.+ .|++|
T Consensus 114 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iw 193 (416)
T 2pm9_A 114 SSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIW 193 (416)
T ss_dssp SCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEE
T ss_pred cceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEE
Confidence 9999999999448999999999999999999886 3332 357889999999999 6888988855 49999
Q ss_pred EcCCCccccCCeEeecC------CCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCC
Q 004203 218 RYNMREETSSPRIVLRT------RRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSS 291 (768)
Q Consensus 218 Dl~t~~~~~~~~~l~~h------~~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d 291 (768)
|+++.+... .+..+ ...|.+++|+|++..+++++..+... ..+.+|+.....
T Consensus 194 d~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~-------------------~~i~~~d~~~~~ 251 (416)
T 2pm9_A 194 DLKAKKEVI---HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND-------------------PSILIWDLRNAN 251 (416)
T ss_dssp ETTTTEEEE---EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS-------------------CCCCEEETTSTT
T ss_pred ECCCCCcce---EEeccccccccCCceEEEEECCCCCCEEEEEECCCCC-------------------ceEEEEeCCCCC
Confidence 999876533 33333 78899999999986555554422100 123334433221
Q ss_pred -CCCcccccCCCCCCceEEEEec-CCCEEEEEec
Q 004203 292 -HPGLAEEVPLITPPFLRPSFVR-DDERISLQHT 323 (768)
Q Consensus 292 -~~~L~~~~~~~slpil~psFSp-DG~rIv~~~~ 323 (768)
...... .....++....|+| |++.|+....
T Consensus 252 ~~~~~~~--~~~~~~v~~~~~s~~~~~~l~s~~~ 283 (416)
T 2pm9_A 252 TPLQTLN--QGHQKGILSLDWCHQDEHLLLSSGR 283 (416)
T ss_dssp SCSBCCC--SCCSSCEEEEEECSSCSSCEEEEES
T ss_pred CCcEEee--cCccCceeEEEeCCCCCCeEEEEeC
Confidence 111111 02344677899999 7877776543
No 72
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2.6e-20 Score=195.90 Aligned_cols=181 Identities=13% Similarity=0.159 Sum_probs=150.7
Q ss_pred CCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEeCCCCe--EEEEEecCCC
Q 004203 81 RRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS--CLKVLHGHRR 150 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSPD--G~~LaSgS~DgtVrVWDl~tg~--~l~~l~gH~g 150 (768)
+..|++++.|+.|++||.... .+..|...|.+++|+|+ +++|++++.|+.|++||++++. ....+.+|..
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 148 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 148 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC
Confidence 789999999999999999876 35689999999999999 9999999999999999998873 4556788999
Q ss_pred CcEEEEEccC------------CCCEEEEEeCCCeEEEEECCCCcEE----EEe-cCCCCeEEEEEcCC---CCEEEEEE
Q 004203 151 TPWVVRFHPL------------NPTIIASGSLDHEVRLWNASTAECI----GSR-DFYRPIASIAFHAS---GELLAVAS 210 (768)
Q Consensus 151 ~V~sVafSP~------------dg~lLaSgS~DgtVrLWDl~sg~~i----~~l-~h~~~V~svafSPD---G~~LatgS 210 (768)
.|.+++|+|. ++.++++++.|+.|++||+++++.. ..+ .|...|.+++|+|+ +++|++++
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 9999999995 5899999999999999999876532 333 47889999999999 89999999
Q ss_pred CC-eEEEEEcCCCccccCCe--EeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCC
Q 004203 211 GH-KLYIWRYNMREETSSPR--IVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDS 261 (768)
Q Consensus 211 dd-~I~IWDl~t~~~~~~~~--~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~s 261 (768)
.+ .|++||+++........ ....|...|.+++|+|+|++|++++. +|++..
T Consensus 229 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 229 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp TTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 55 59999999874321111 12237789999999999998888765 666653
No 73
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.86 E-value=3.6e-20 Score=217.13 Aligned_cols=237 Identities=11% Similarity=0.116 Sum_probs=184.5
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCC
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g 150 (768)
.+...++..|++++.|+.|++||..++ .+.+|...|++++|+||+++|++++.|+.|++||+++++.+..+.+|.+
T Consensus 19 i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 98 (814)
T 3mkq_A 19 IDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD 98 (814)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCC
Confidence 445567889999999999999999876 4678999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCC-cEEEEe-cCCCCeEEEEEcC-CCCEEEEEECC-eEEEEEcCCCcccc
Q 004203 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTA-ECIGSR-DFYRPIASIAFHA-SGELLAVASGH-KLYIWRYNMREETS 226 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg-~~i~~l-~h~~~V~svafSP-DG~~LatgSdd-~I~IWDl~t~~~~~ 226 (768)
.|++++|+| ++.+|++++.|++|++||++++ .....+ .|...|.+++|+| ++..|++++.+ .|++||+.+.....
T Consensus 99 ~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~ 177 (814)
T 3mkq_A 99 YIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (814)
T ss_dssp CEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE
T ss_pred CEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee
Confidence 999999999 9999999999999999999987 444444 5888999999999 88899999854 59999998776422
Q ss_pred CCeEeec-CCCCeEEEEEcc--CCCeEEEEEe-----eCCcCCCCcceeEeecCCccc---C-----------CCCeEEE
Q 004203 227 SPRIVLR-TRRSLRAVHFHP--HAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR---Y-----------PPPVICM 284 (768)
Q Consensus 227 ~~~~l~~-h~~~V~sVaFSP--DG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~---~-----------p~~~V~l 284 (768)
.... +...+..++|+| ++.++++++. +|++..+.....+..+.+... + ....+.+
T Consensus 178 ---~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~v 254 (814)
T 3mkq_A 178 ---TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKI 254 (814)
T ss_dssp ---EEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred ---EEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 3433 458899999999 9998777664 777766544444432222111 0 1244566
Q ss_pred ecCCCCCCCCcccccCCCCCCceEEEEecCCCEE
Q 004203 285 AGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERI 318 (768)
Q Consensus 285 ~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rI 318 (768)
|+..+..... .......+++..+|+|+++.+
T Consensus 255 wd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 255 WNSSTYKVEK---TLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp EETTTCSEEE---EECCSSSSEEEEEECTTCGGG
T ss_pred EECCCCcEEE---EeecCCCcEEEEEEccCCCce
Confidence 6655433222 222234467788999999854
No 74
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.86 E-value=7.8e-19 Score=180.84 Aligned_cols=234 Identities=15% Similarity=0.172 Sum_probs=175.7
Q ss_pred EEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEE
Q 004203 83 GLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVR 156 (768)
Q Consensus 83 ~LvSgs~DgsIrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVa 156 (768)
.|+. +.|++|++||..+++ +.+|...|++++|+|++++|++|+.|++|++||+++++++..+.+|...+.++.
T Consensus 38 ~lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~ 116 (318)
T 4ggc_A 38 VLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS 116 (318)
T ss_dssp EEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEee
Confidence 4444 459999999999873 457889999999999999999999999999999999999999999999887655
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCCCcEE-EE-ecCCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccC-CeEee
Q 004203 157 FHPLNPTIIASGSLDHEVRLWNASTAECI-GS-RDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSS-PRIVL 232 (768)
Q Consensus 157 fSP~dg~lLaSgS~DgtVrLWDl~sg~~i-~~-l~h~~~V~svafSPDG~~LatgSdd~-I~IWDl~t~~~~~~-~~~l~ 232 (768)
+ ++.++++++.++.+++|+...+... .. ..|...+..+.|++++++|++++.++ |++||+++++.... .....
T Consensus 117 ~---~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 193 (318)
T 4ggc_A 117 W---NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFT 193 (318)
T ss_dssp E---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEEC
T ss_pred c---CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeec
Confidence 5 5689999999999999999876443 33 46889999999999999999999655 99999988764332 23445
Q ss_pred cCCCCeEEEEEccCCCeEEEEEe--------eCCcCCCCcceeEeecCC-----------cc----cCCCCeEEEecCCC
Q 004203 233 RTRRSLRAVHFHPHAAPLLLTAE--------VNDLDSSESSLTLATSPG-----------YW----RYPPPVICMAGAHS 289 (768)
Q Consensus 233 ~h~~~V~sVaFSPDG~~LlaS~s--------vwdl~sg~~~~~L~t~~G-----------~~----~~p~~~V~l~d~~s 289 (768)
.+...|..+.++|++..++..+. +|+............... .. ......+.+|+..+
T Consensus 194 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~ 273 (318)
T 4ggc_A 194 QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 273 (318)
T ss_dssp CCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred ccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC
Confidence 57789999999999887765432 566554433222111110 00 01235677888766
Q ss_pred CCCCCcccccCCCCCCceEEEEecCCCEEEEEec
Q 004203 290 SSHPGLAEEVPLITPPFLRPSFVRDDERISLQHT 323 (768)
Q Consensus 290 ~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~ 323 (768)
+..... ..+...++...+|+|||+.|+....
T Consensus 274 ~~~~~~---l~gH~~~V~~l~~spdg~~l~S~s~ 304 (318)
T 4ggc_A 274 MAKVAE---LKGHTSRVLSLTMSPDGATVASAAA 304 (318)
T ss_dssp CCEEEE---ECCCSSCEEEEEECTTSSCEEEEET
T ss_pred CcEEEE---EcCCCCCEEEEEEcCCCCEEEEEec
Confidence 544333 3345667889999999999987543
No 75
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.86 E-value=1.7e-20 Score=203.10 Aligned_cols=224 Identities=13% Similarity=0.078 Sum_probs=160.8
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeCCCC-------------CCCCCCCCeEEEEECCCCCEEEEEe--CCCeEEEEeCCC
Q 004203 74 FEAGRDARRGLASWVEAESLHHLRPKYC-------------PLSPPPRSTIAAAFSPDGKTLASTH--GDHTVKIIDCQT 138 (768)
Q Consensus 74 ~~a~~d~g~~LvSgs~DgsIrlWd~~t~-------------~L~gH~~~VtslafSPDG~~LaSgS--~DgtVrVWDl~t 138 (768)
+....+....|++++.|+.+++|+.... ....+...+.+++|||||++|++++ .|++|+|||+++
T Consensus 87 ~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~ 166 (365)
T 4h5i_A 87 LVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD 166 (365)
T ss_dssp EEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT
T ss_pred EEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC
Confidence 3333444555666677889999987643 1234566799999999999987654 689999999999
Q ss_pred CeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE---ecCCCCeEEEEEcCCCCEEEEEEC-C--
Q 004203 139 GSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS---RDFYRPIASIAFHASGELLAVASG-H-- 212 (768)
Q Consensus 139 g~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~---l~h~~~V~svafSPDG~~LatgSd-d-- 212 (768)
++++..+. |.+.|++++|+| +++++++++.| .+++|+..+++.+.. ..|...|.+++|+|+++++++++. +
T Consensus 167 ~~~~~~~~-~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~ 243 (365)
T 4h5i_A 167 LTEKFEIE-TRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGK 243 (365)
T ss_dssp TEEEEEEE-CSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSC
T ss_pred CcEEEEeC-CCCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc
Confidence 99988886 778899999999 99999999865 567777777766543 246778999999999999999883 3
Q ss_pred --eEEEEEcCCCcccc-CCeEeecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecCCC
Q 004203 213 --KLYIWRYNMREETS-SPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHS 289 (768)
Q Consensus 213 --~I~IWDl~t~~~~~-~~~~l~~h~~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s 289 (768)
.+++||+....... ....+.+|...|++++|+|||++|++++... .|.+|+..+
T Consensus 244 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~-----------------------~V~iwd~~~ 300 (365)
T 4h5i_A 244 GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN-----------------------SIALVKLKD 300 (365)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS-----------------------CEEEEETTT
T ss_pred eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC-----------------------EEEEEECCC
Confidence 27888887665422 1234567889999999999999887766411 122233222
Q ss_pred CCCCCcccccCCCCCCceEEEEecCCCEEEEEecCC
Q 004203 290 SSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEH 325 (768)
Q Consensus 290 ~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d~ 325 (768)
+.. +.....+...++...+|||||++|+..-.|.
T Consensus 301 ~~~--~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 301 LSM--SKIFKQAHSFAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp TEE--EEEETTSSSSCEEEEEECTTSCEEEEEETTS
T ss_pred CcE--EEEecCcccCCEEEEEECCCCCEEEEEeCCC
Confidence 111 1111122344677899999999999865544
No 76
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.86 E-value=2.8e-20 Score=191.29 Aligned_cols=123 Identities=18% Similarity=0.221 Sum_probs=108.3
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC----eEEEEEecCCCCcEEEEEccC-CCCEEEEEeCCCeEEE
Q 004203 102 PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG----SCLKVLHGHRRTPWVVRFHPL-NPTIIASGSLDHEVRL 176 (768)
Q Consensus 102 ~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg----~~l~~l~gH~g~V~sVafSP~-dg~lLaSgS~DgtVrL 176 (768)
.+.+|.+.|++++|+|++++|++++.|+.|++||+.++ +....+.+|...|.+++|+|. ++++|++++.|++|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 35789999999999999999999999999999999876 467788899999999999994 4899999999999999
Q ss_pred EECCCC---------cEEEEe-cCCCCeEEEEEcCC--CCEEEEEECC-eEEEEEcCCCcc
Q 004203 177 WNASTA---------ECIGSR-DFYRPIASIAFHAS--GELLAVASGH-KLYIWRYNMREE 224 (768)
Q Consensus 177 WDl~sg---------~~i~~l-~h~~~V~svafSPD--G~~LatgSdd-~I~IWDl~t~~~ 224 (768)
||++++ +.+..+ .|...|.+++|+|+ +++|++++.+ .|++||+++.+.
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 146 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSD 146 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTC
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHH
Confidence 999987 334444 58899999999999 9999999955 599999987653
No 77
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.86 E-value=1.7e-20 Score=206.57 Aligned_cols=188 Identities=15% Similarity=0.129 Sum_probs=144.8
Q ss_pred CCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCCCCeEE--EEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECC
Q 004203 104 SPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCL--KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS 180 (768)
Q Consensus 104 ~gH~~~VtslafSP-DG~~LaSgS~DgtVrVWDl~tg~~l--~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~ 180 (768)
.+|...|++++|+| ++++||+|+.||+|+|||+.+++.. ..+.+|.+.|++++|+|.++++|++++.|++|+|||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 46888999999999 6789999999999999999887643 44568999999999999788999999999999999998
Q ss_pred CCcEEEEec---CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe-
Q 004203 181 TAECIGSRD---FYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE- 255 (768)
Q Consensus 181 sg~~i~~l~---h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s- 255 (768)
++....... +...+.+++|+|++++|++++.+ .|++||++.... ..+..|...|.+++|+|++..++++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~----~~~~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL----WNLRMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC----CCSBCCSSCEEEEEECTTCSSEEEEEET
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCccee----EEEecccceEEeeeecCCCceEEEEecC
Confidence 765544433 33467899999999999999955 499999976432 246678999999999999987776654
Q ss_pred -----eCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEec
Q 004203 256 -----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHT 323 (768)
Q Consensus 256 -----vwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~ 323 (768)
+||++..+.... .........++...+|+|||++|+....
T Consensus 272 d~~v~iwd~~~~~~~~~----------------------------~~~~~~h~~~v~~~~~spdg~~l~s~~~ 316 (435)
T 4e54_B 272 DQTVKIWDLRQVRGKAS----------------------------FLYSLPHRHPVNAACFSPDGARLLTTDQ 316 (435)
T ss_dssp TSBCCEEETTTCCSSSC----------------------------CSBCCBCSSCEEECCBCTTSSEEEEEES
T ss_pred cceeeEEecccccccce----------------------------EEEeeeccccccceeECCCCCeeEEEcC
Confidence 444443222111 1111223345667899999999987543
No 78
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.86 E-value=6.8e-20 Score=201.67 Aligned_cols=174 Identities=16% Similarity=0.274 Sum_probs=146.7
Q ss_pred CCCEEEEEeCCCeEEEEeCCC----------C----CCCCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeCCCCeE---
Q 004203 80 ARRGLASWVEAESLHHLRPKY----------C----PLSPPPRSTIAAAFSPDGK-TLASTHGDHTVKIIDCQTGSC--- 141 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t----------~----~L~gH~~~VtslafSPDG~-~LaSgS~DgtVrVWDl~tg~~--- 141 (768)
++..|++++.++.|++|++.. . .+.+|...|++++|+|+++ +|++++.||.|++||+.++..
T Consensus 140 ~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 219 (430)
T 2xyi_A 140 NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHR 219 (430)
T ss_dssp EEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGG
T ss_pred CCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCc
Confidence 367899999999999999875 2 3568999999999999988 999999999999999987432
Q ss_pred ----EEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCC---cEEEEe-cCCCCeEEEEEcCCCC-EEEEEEC-
Q 004203 142 ----LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA---ECIGSR-DFYRPIASIAFHASGE-LLAVASG- 211 (768)
Q Consensus 142 ----l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg---~~i~~l-~h~~~V~svafSPDG~-~LatgSd- 211 (768)
...+.+|...|.+++|+|+++.+|++++.|+.|++||++++ +.+..+ .|...|.+++|+|+++ +|++++.
T Consensus 220 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d 299 (430)
T 2xyi_A 220 VIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD 299 (430)
T ss_dssp EEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT
T ss_pred eeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC
Confidence 46778999999999999977889999999999999999987 444444 6889999999999998 6888885
Q ss_pred CeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 212 HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 212 d~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
+.|++||+++... ....+..|...|.+++|+|+++.+++++.
T Consensus 300 g~v~vwd~~~~~~--~~~~~~~h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 300 KTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp SEEEEEETTCTTS--CSEEEECCSSCEEEEEECSSCTTEEEEEE
T ss_pred CeEEEEeCCCCCC--CeEEeecCCCCEEEEEECCCCCCEEEEEe
Confidence 4599999988543 23456678999999999999987666554
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.86 E-value=5.6e-20 Score=196.20 Aligned_cols=177 Identities=18% Similarity=0.122 Sum_probs=149.3
Q ss_pred CEEEEEeCCCeEEEEeCCCCC---------CCCC-----CCCeEEEEEC----CCCCE-EEEEeCCCeEEEEeCCC----
Q 004203 82 RGLASWVEAESLHHLRPKYCP---------LSPP-----PRSTIAAAFS----PDGKT-LASTHGDHTVKIIDCQT---- 138 (768)
Q Consensus 82 ~~LvSgs~DgsIrlWd~~t~~---------L~gH-----~~~VtslafS----PDG~~-LaSgS~DgtVrVWDl~t---- 138 (768)
..|++++.|+.|++|++.... +..| ...|.+++|+ |++++ |++++.|+.|++||+++
T Consensus 82 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred cEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 899999999999999987653 4567 5999999999 99999 99999999999999998
Q ss_pred --CeEEE-----EEe-------cCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec----C---CCCeEEE
Q 004203 139 --GSCLK-----VLH-------GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD----F---YRPIASI 197 (768)
Q Consensus 139 --g~~l~-----~l~-------gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~----h---~~~V~sv 197 (768)
++.+. .+. .|...|.+++|+| ++ ++++++.|+.|++||+++++.+..+. | ...|.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceE
Confidence 66655 774 4889999999999 77 99999999999999999999888765 5 8899999
Q ss_pred EEcCCCCEEEEEECC----eEEEEEcCCCccccCCeEeec-------------CCCCeEEEEEccCCCeEEEEEe-----
Q 004203 198 AFHASGELLAVASGH----KLYIWRYNMREETSSPRIVLR-------------TRRSLRAVHFHPHAAPLLLTAE----- 255 (768)
Q Consensus 198 afSPDG~~LatgSdd----~I~IWDl~t~~~~~~~~~l~~-------------h~~~V~sVaFSPDG~~LlaS~s----- 255 (768)
+|+|++++|++++.+ .|++||+++.+... .+.. |...|.+++|+|++++|++++.
T Consensus 240 ~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 240 KFSPQGSLLAIAHDSNSFGCITLYETEFGERIG---SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp EECSSTTEEEEEEEETTEEEEEEEETTTCCEEE---EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred EECCCCCEEEEEecCCCCceEEEEECCCCcccc---eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 999999999999865 59999999876543 4555 8899999999999998887764
Q ss_pred eCCcCCCC
Q 004203 256 VNDLDSSE 263 (768)
Q Consensus 256 vwdl~sg~ 263 (768)
+|+++.++
T Consensus 317 iwd~~~~~ 324 (397)
T 1sq9_A 317 FWDVKTKE 324 (397)
T ss_dssp EEETTTTE
T ss_pred EEEcCCCc
Confidence 67776543
No 80
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.86 E-value=3.2e-19 Score=187.89 Aligned_cols=176 Identities=16% Similarity=0.156 Sum_probs=150.6
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeE----EE
Q 004203 74 FEAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC----LK 143 (768)
Q Consensus 74 ~~a~~d~g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~----l~ 143 (768)
......++..|++++.|+.|++||.... .+..|...|.+++|+|++++|++++.|+.|++||+++++. ..
T Consensus 57 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~ 136 (372)
T 1k8k_C 57 GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH 136 (372)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeee
Confidence 3444567889999999999999999776 2478999999999999999999999999999999988762 33
Q ss_pred EEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECC------------------CCcEEEEe-cCCCCeEEEEEcCCCC
Q 004203 144 VLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS------------------TAECIGSR-DFYRPIASIAFHASGE 204 (768)
Q Consensus 144 ~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~------------------sg~~i~~l-~h~~~V~svafSPDG~ 204 (768)
...+|...|.+++|+| ++++|++++.|+.|++||++ .++.+..+ .|...|.+++|+|+++
T Consensus 137 ~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 215 (372)
T 1k8k_C 137 IKKPIRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS 215 (372)
T ss_dssp ECTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS
T ss_pred eecccCCCeeEEEEcC-CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC
Confidence 3367899999999999 99999999999999999954 56777776 5888999999999999
Q ss_pred EEEEEECC-eEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEE
Q 004203 205 LLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 205 ~LatgSdd-~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
+|++++.+ .|++||+++++... .+..|...|.+++|+|++++++++
T Consensus 216 ~l~~~~~d~~i~i~d~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 216 RVAWVSHDSTVCLADADKKMAVA---TLASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp EEEEEETTTEEEEEEGGGTTEEE---EEECSSCCEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCceeE---EEccCCCCeEEEEEecCCCEEEEE
Confidence 99999955 59999999887543 566788899999999999966655
No 81
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.86 E-value=7.5e-21 Score=217.87 Aligned_cols=211 Identities=9% Similarity=0.018 Sum_probs=152.0
Q ss_pred CEEEEEeCCCeEEEEeCCCCC--------CCCCCCCeEEEEECCC------CCEEEEEeCCCeEEEEeCCCCeE------
Q 004203 82 RGLASWVEAESLHHLRPKYCP--------LSPPPRSTIAAAFSPD------GKTLASTHGDHTVKIIDCQTGSC------ 141 (768)
Q Consensus 82 ~~LvSgs~DgsIrlWd~~t~~--------L~gH~~~VtslafSPD------G~~LaSgS~DgtVrVWDl~tg~~------ 141 (768)
..+++++.|++|++|+..+++ +..|.+.|.+++|+|+ +.+||+++.|++|++||+.+++.
T Consensus 174 ~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~ 253 (524)
T 2j04_B 174 EMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK 253 (524)
T ss_dssp --------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE
T ss_pred hhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce
Confidence 357888999999999987664 3467889999999997 57999999999999999987642
Q ss_pred -----EEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE-EEE-ecCCCCeEEE--EEcCCC-CEEEEEEC
Q 004203 142 -----LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC-IGS-RDFYRPIASI--AFHASG-ELLAVASG 211 (768)
Q Consensus 142 -----l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~-i~~-l~h~~~V~sv--afSPDG-~~LatgSd 211 (768)
...+.+|...|.+++|++ + ..|++|+.||+|++||+++++. ... ..|...|.++ +|+|++ .+|++++.
T Consensus 254 ~~~~p~~~l~~h~~~v~sv~~s~-~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 254 MCEKPSLTLSLADSLITTFDFLS-P-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp CCCSCSEEECCTTTCEEEEEESS-S-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred eecCceEEEEcCCCCEEEEEecC-C-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 247889999999999998 4 4899999999999999997643 333 4688999999 578888 89999995
Q ss_pred C-eEEEEEcCCCccccCCeEeecCC--CCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecCC
Q 004203 212 H-KLYIWRYNMREETSSPRIVLRTR--RSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAH 288 (768)
Q Consensus 212 d-~I~IWDl~t~~~~~~~~~l~~h~--~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~ 288 (768)
| .|+|||+++.+... .+.+|. ..|.+++|+|+++.+++++... .+.+|+..
T Consensus 332 D~tvklWD~~~~~~~~---~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~-----------------------tv~lwd~~ 385 (524)
T 2j04_B 332 DGYFYIFNPKDIATTK---TTVSRFRGSNLVPVVYCPQIYSYIYSDGAS-----------------------SLRAVPSR 385 (524)
T ss_dssp TSEEEEECGGGHHHHC---EEEEECSCCSCCCEEEETTTTEEEEECSSS-----------------------EEEEEETT
T ss_pred CCeEEEEECCCCCccc---ccccccccCcccceEeCCCcCeEEEeCCCC-----------------------cEEEEECc
Confidence 5 59999998876543 344453 3588999999999777654311 12333322
Q ss_pred CCCCCCcccccCCCCCCceEEEEecCCCEEEEEec
Q 004203 289 SSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHT 323 (768)
Q Consensus 289 s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~ 323 (768)
.+....... +...+++..+|||||+.|+..-.
T Consensus 386 ~~~~~~~l~---gH~~~V~sva~Sp~g~~l~Sgs~ 417 (524)
T 2j04_B 386 AAFAVHPLV---SRETTITAIGVSRLHPMVLAGSA 417 (524)
T ss_dssp CTTCCEEEE---ECSSCEEEEECCSSCCBCEEEET
T ss_pred ccccceeee---cCCCceEEEEeCCCCCeEEEEEC
Confidence 222211111 12336678899999998886543
No 82
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.86 E-value=7.1e-21 Score=201.00 Aligned_cols=176 Identities=18% Similarity=0.215 Sum_probs=144.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEeCCCCeE---EEEEecC
Q 004203 80 ARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGSC---LKVLHGH 148 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSPD--G~~LaSgS~DgtVrVWDl~tg~~---l~~l~gH 148 (768)
.+..|++++.|++|++||..++ .+.+|...|.+++|+|+ +.+|++++.|++|++||++++.. ...+.+|
T Consensus 70 ~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h 149 (316)
T 3bg1_A 70 YGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAH 149 (316)
T ss_dssp GSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSS
T ss_pred CCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccc
Confidence 3788999999999999999875 25689999999999997 88999999999999999987632 3456789
Q ss_pred CCCcEEEEEccCC----------------CCEEEEEeCCCeEEEEECCCC---cEEEEe-cCCCCeEEEEEcCCC----C
Q 004203 149 RRTPWVVRFHPLN----------------PTIIASGSLDHEVRLWNASTA---ECIGSR-DFYRPIASIAFHASG----E 204 (768)
Q Consensus 149 ~g~V~sVafSP~d----------------g~lLaSgS~DgtVrLWDl~sg---~~i~~l-~h~~~V~svafSPDG----~ 204 (768)
...|.++.|+|+. +++|++++.|++|+|||++.+ +++..+ .|...|.+++|+|++ +
T Consensus 150 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~ 229 (316)
T 3bg1_A 150 TIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS 229 (316)
T ss_dssp SSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCC
T ss_pred cCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCc
Confidence 9999999999931 468999999999999999865 344444 588899999999987 7
Q ss_pred EEEEEECC-eEEEEEcCCCcc-ccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 205 LLAVASGH-KLYIWRYNMREE-TSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 205 ~LatgSdd-~I~IWDl~t~~~-~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
+|++++.| .|++||+++... ......+..|...|.+++|+|+|++|++++.
T Consensus 230 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 230 TIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp EEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES
T ss_pred eEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC
Confidence 89999955 599999986321 1112345568899999999999998888775
No 83
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.85 E-value=5.6e-20 Score=196.23 Aligned_cols=164 Identities=20% Similarity=0.219 Sum_probs=144.0
Q ss_pred cCCCE-EEEEeCCCeEEEEeCCC------CC---------C-------CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Q 004203 79 DARRG-LASWVEAESLHHLRPKY------CP---------L-------SPPPRSTIAAAFSPDGKTLASTHGDHTVKIID 135 (768)
Q Consensus 79 d~g~~-LvSgs~DgsIrlWd~~t------~~---------L-------~gH~~~VtslafSPDG~~LaSgS~DgtVrVWD 135 (768)
.++.. |++++.|+.|++||+.. .. + ..|...|.+++|+|++ +|++++.|+.|++||
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISE 213 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEE
Confidence 56777 99999999999999987 32 2 3488999999999999 999999999999999
Q ss_pred CCCCeEEEEEec---C---CCCcEEEEEccCCCCEEEEEeCC---CeEEEEECCCCcEEEEec--------------CCC
Q 004203 136 CQTGSCLKVLHG---H---RRTPWVVRFHPLNPTIIASGSLD---HEVRLWNASTAECIGSRD--------------FYR 192 (768)
Q Consensus 136 l~tg~~l~~l~g---H---~g~V~sVafSP~dg~lLaSgS~D---gtVrLWDl~sg~~i~~l~--------------h~~ 192 (768)
+++++.+..+.. | ...|.+++|+| ++++|++++.| +.|++||+++++.+..+. |..
T Consensus 214 ~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 214 LSTLRPLYNFESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp TTTTEEEEEEECCC---CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred CCCCceeEEEeccccccccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 999999999999 9 99999999999 89999999999 999999999998887764 788
Q ss_pred CeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEee------cC---------------CCCeEEEEEccCC
Q 004203 193 PIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIVL------RT---------------RRSLRAVHFHPHA 247 (768)
Q Consensus 193 ~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~~~~~~l~------~h---------------~~~V~sVaFSPDG 247 (768)
.|.+++|+|++++|++++.+ .|++||+++.+... .+. .| ...|.+++|+|+|
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERIT---TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE---EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeE---EEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 99999999999999999955 59999999887544 444 56 8999999999998
No 84
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.85 E-value=9.5e-20 Score=212.66 Aligned_cols=179 Identities=19% Similarity=0.199 Sum_probs=152.5
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC-------CCCCCCCCeEEEEECCCC--CEEEEEeCCCeEEEEeCCCCeEEEEEe
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYC-------PLSPPPRSTIAAAFSPDG--KTLASTHGDHTVKIIDCQTGSCLKVLH 146 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~-------~L~gH~~~VtslafSPDG--~~LaSgS~DgtVrVWDl~tg~~l~~l~ 146 (768)
+...++..|++++.|++|++||.... ...+|...|.+++|+|++ ..|++++.|++|++||+++++....+.
T Consensus 479 ~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~ 558 (694)
T 3dm0_A 479 AFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA 558 (694)
T ss_dssp EECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 34457788999999999999998643 235799999999999987 589999999999999999999999999
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCcccc
Q 004203 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETS 226 (768)
Q Consensus 147 gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSdd~I~IWDl~t~~~~~ 226 (768)
+|.+.|++++|+| ++++|++++.|++|+|||+++++++..+.+...+.+++|+|++.+|+++++++|++||++++....
T Consensus 559 ~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 559 GHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVE 637 (694)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEE
T ss_pred CCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChh
Confidence 9999999999999 999999999999999999999999988888889999999999999999999999999999876432
Q ss_pred CCe----------------EeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 227 SPR----------------IVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 227 ~~~----------------~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
... ....+...+.+++|+|||++|++++.
T Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~ 682 (694)
T 3dm0_A 638 DLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT 682 (694)
T ss_dssp EECCCCC----------------CCCCEEEEEECTTSSEEEEEET
T ss_pred hhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC
Confidence 100 00011224789999999998887764
No 85
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.85 E-value=9.2e-20 Score=190.15 Aligned_cols=174 Identities=10% Similarity=0.016 Sum_probs=147.9
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCCC-------CCCCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeC-CCCeEEEEEe
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYCP-------LSPPPRSTIAAAFSPDGK-TLASTHGDHTVKIIDC-QTGSCLKVLH 146 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~~-------L~gH~~~VtslafSPDG~-~LaSgS~DgtVrVWDl-~tg~~l~~l~ 146 (768)
+...++..|++++.|+.|++|+..... +.+|...|++++|+|+++ +|++++.|+.|++||+ ++++. ..+.
T Consensus 18 ~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~ 96 (342)
T 1yfq_A 18 KIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALT 96 (342)
T ss_dssp EEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECB
T ss_pred EEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-Eecc
Confidence 344567889999999999999987653 458999999999999999 9999999999999999 87764 7778
Q ss_pred c--CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC---------CcEEEEecCCCCeEEEEEcCCCCEEEEEE-CCeE
Q 004203 147 G--HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST---------AECIGSRDFYRPIASIAFHASGELLAVAS-GHKL 214 (768)
Q Consensus 147 g--H~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~s---------g~~i~~l~h~~~V~svafSPDG~~LatgS-dd~I 214 (768)
+ |...|.+++|+| ++++++++.|+.|++||+++ ++++..+.+...+.+++|+|++ |++++ ++.|
T Consensus 97 ~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i 172 (342)
T 1yfq_A 97 NNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQV 172 (342)
T ss_dssp SCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEE
T ss_pred ccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeE
Confidence 8 999999999999 88999999999999999998 7777777889999999999988 66666 5569
Q ss_pred EEEEcCC-CccccCCeEeecCCCCeEEEEEcc-CCCeEEEEEe
Q 004203 215 YIWRYNM-REETSSPRIVLRTRRSLRAVHFHP-HAAPLLLTAE 255 (768)
Q Consensus 215 ~IWDl~t-~~~~~~~~~l~~h~~~V~sVaFSP-DG~~LlaS~s 255 (768)
++||+++ ..... ......+...|.+++|+| +++++++++.
T Consensus 173 ~i~d~~~~~~~~~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 173 QWFRLPLCEDDNG-TIEESGLKYQIRDVALLPKEQEGYACSSI 214 (342)
T ss_dssp EEEESSCCTTCCC-EEEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred EEEECCccccccc-eeeecCCCCceeEEEECCCCCCEEEEEec
Confidence 9999988 54321 224456788999999999 9998877764
No 86
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.85 E-value=2.5e-20 Score=195.10 Aligned_cols=191 Identities=17% Similarity=0.235 Sum_probs=157.7
Q ss_pred CCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEE---ecCCCCc
Q 004203 81 RRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVL---HGHRRTP 152 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSP-DG~~LaSgS~DgtVrVWDl~tg~~l~~l---~gH~g~V 152 (768)
+..|++++.|+.|++||..+. .+.+|...|.+++|+| ++++|++++.|+.|++||+++++.+..+ .+|...|
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v 164 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV 164 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCE
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCce
Confidence 568999999999999999876 3668999999999999 9999999999999999999999999888 7899999
Q ss_pred EEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-----------------------------CCCCeEEEEEcCCC
Q 004203 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-----------------------------FYRPIASIAFHASG 203 (768)
Q Consensus 153 ~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-----------------------------h~~~V~svafSPDG 203 (768)
.+++|+| ++++|++++.|+.|++||+++++....+. |...|.+++|+ +
T Consensus 165 ~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 241 (366)
T 3k26_A 165 LSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G 241 (366)
T ss_dssp EEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T
T ss_pred eEEEECC-CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C
Confidence 9999999 99999999999999999999876543322 88899999999 7
Q ss_pred CEEEEEEC-CeEEEEEcCCCccc-----------cCCeEeecCCCCeEEEEEccC--CCeEEEEEe-----eCCcCCCCc
Q 004203 204 ELLAVASG-HKLYIWRYNMREET-----------SSPRIVLRTRRSLRAVHFHPH--AAPLLLTAE-----VNDLDSSES 264 (768)
Q Consensus 204 ~~LatgSd-d~I~IWDl~t~~~~-----------~~~~~l~~h~~~V~sVaFSPD--G~~LlaS~s-----vwdl~sg~~ 264 (768)
++|++++. +.|++||+++.... .....+..|...|.+++|+|+ +++|++++. +|++..++.
T Consensus 242 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 242 DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSG
T ss_pred CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCC
Confidence 78998885 55999999876531 112345567889999999999 998777764 788876654
Q ss_pred ce-eEeecCCc
Q 004203 265 SL-TLATSPGY 274 (768)
Q Consensus 265 ~~-~L~t~~G~ 274 (768)
.. .+....++
T Consensus 322 ~~~~~~~~~~~ 332 (366)
T 3k26_A 322 HKAKCTTLTHH 332 (366)
T ss_dssp GGCEEEEECCT
T ss_pred ccccceEEccc
Confidence 32 33334444
No 87
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.85 E-value=4.4e-20 Score=199.85 Aligned_cols=178 Identities=16% Similarity=0.178 Sum_probs=142.2
Q ss_pred EEEEecCCCEEE--EEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEE--EEe
Q 004203 74 FEAGRDARRGLA--SWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK--VLH 146 (768)
Q Consensus 74 ~~a~~d~g~~Lv--Sgs~DgsIrlWd~~t~~---L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~--~l~ 146 (768)
.++...+++.++ +++.|++|++||..+.+ ...|...|.+++|+|||++|++++.| .+++|+..+++.+. ...
T Consensus 138 ~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~ 216 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDF 216 (365)
T ss_dssp EEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCC
T ss_pred EEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecC
Confidence 345556677665 45579999999998873 22588899999999999999999865 56677767776553 345
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCC----eEEEEECCCCcEEE-----EecCCCCeEEEEEcCCCCEEEEEECCe-EEE
Q 004203 147 GHRRTPWVVRFHPLNPTIIASGSLDH----EVRLWNASTAECIG-----SRDFYRPIASIAFHASGELLAVASGHK-LYI 216 (768)
Q Consensus 147 gH~g~V~sVafSP~dg~lLaSgS~Dg----tVrLWDl~sg~~i~-----~l~h~~~V~svafSPDG~~LatgSdd~-I~I 216 (768)
+|...|.+++|+| ++.++++++.|+ .+++||+....... ...|...|.+++|+|||++||+++.|+ |+|
T Consensus 217 ~~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~i 295 (365)
T 4h5i_A 217 DKNWSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIAL 295 (365)
T ss_dssp CTTEEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CCCCCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEE
Confidence 7888999999999 999999999887 68999988765422 235788999999999999999999655 999
Q ss_pred EEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 217 WRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 217 WDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
||+++++... ....+|...|++|+|||||++|++++.
T Consensus 296 wd~~~~~~~~--~~~~gH~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 296 VKLKDLSMSK--IFKQAHSFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp EETTTTEEEE--EETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred EECCCCcEEE--EecCcccCCEEEEEECCCCCEEEEEeC
Confidence 9999887533 123579999999999999998887664
No 88
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.4e-19 Score=214.64 Aligned_cols=177 Identities=16% Similarity=0.170 Sum_probs=150.8
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEeCCCCe--EEEEEec
Q 004203 78 RDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS--CLKVLHG 147 (768)
Q Consensus 78 ~d~g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSPD--G~~LaSgS~DgtVrVWDl~tg~--~l~~l~g 147 (768)
..++..|++++.|+.|++||.... .+.+|.+.|++++|+++ +++|++++.||.|++||+++++ .+..+.+
T Consensus 18 s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~ 97 (753)
T 3jro_A 18 DYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAV 97 (753)
T ss_dssp CSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECC
T ss_pred CCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccC
Confidence 356778999999999999998733 57899999999999998 9999999999999999999987 7788889
Q ss_pred CCCCcEEEEEccCC--CCEEEEEeCCCeEEEEECCCCcE---EEEecCCCCeEEEEEcC-------------CCCEEEEE
Q 004203 148 HRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTAEC---IGSRDFYRPIASIAFHA-------------SGELLAVA 209 (768)
Q Consensus 148 H~g~V~sVafSP~d--g~lLaSgS~DgtVrLWDl~sg~~---i~~l~h~~~V~svafSP-------------DG~~Latg 209 (768)
|...|.+++|+| + ++++++++.|++|++||++++.. .....|...|.+++|+| ++++|+++
T Consensus 98 h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg 176 (753)
T 3jro_A 98 HSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 176 (753)
T ss_dssp CSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEE
T ss_pred CCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEE
Confidence 999999999999 7 89999999999999999998733 33346889999999999 58899999
Q ss_pred ECC-eEEEEEcCCCcccc-CCeEeecCCCCeEEEEEccC---CCeEEEEEe
Q 004203 210 SGH-KLYIWRYNMREETS-SPRIVLRTRRSLRAVHFHPH---AAPLLLTAE 255 (768)
Q Consensus 210 Sdd-~I~IWDl~t~~~~~-~~~~l~~h~~~V~sVaFSPD---G~~LlaS~s 255 (768)
+.+ .|++||+++..... ....+..|...|.+++|+|+ ++++++++.
T Consensus 177 s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 177 GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 955 59999998875321 12345678999999999999 787776654
No 89
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.84 E-value=6e-20 Score=200.04 Aligned_cols=192 Identities=10% Similarity=0.102 Sum_probs=151.3
Q ss_pred EEEEec-CCCEEEEEeCCCeEEEEeCCC---C-----CCC-CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC---CCe
Q 004203 74 FEAGRD-ARRGLASWVEAESLHHLRPKY---C-----PLS-PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQ---TGS 140 (768)
Q Consensus 74 ~~a~~d-~g~~LvSgs~DgsIrlWd~~t---~-----~L~-gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~---tg~ 140 (768)
..+... ++..|++++.|+.|++||... . .+. +|...|++++|+|++++|++++.|++|++||++ +++
T Consensus 68 ~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~ 147 (437)
T 3gre_A 68 SSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQES 147 (437)
T ss_dssp EEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETT
T ss_pred EEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCc
Confidence 344455 788999999999999999876 2 222 699999999999999999999999999999994 565
Q ss_pred EEEEEec------------CCCCcEEEE--EccCCCCEEEEEeCCCeEEEEECCCCcEEEEec---CCCCeEEEEEcCCC
Q 004203 141 CLKVLHG------------HRRTPWVVR--FHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHASG 203 (768)
Q Consensus 141 ~l~~l~g------------H~g~V~sVa--fSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~---h~~~V~svafSPDG 203 (768)
....+.+ +...+.++. +++ ++.++++++.|+.|++||+++++++..+. |...|.+++|+|++
T Consensus 148 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 226 (437)
T 3gre_A 148 EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEEC 226 (437)
T ss_dssp EEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTS
T ss_pred eeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCC
Confidence 5554443 344555555 556 78999999999999999999999888764 67899999999999
Q ss_pred CEEEEEECCe-EEEEEcCCCccccCCeEe-ecCCCCeEEEEEcc----CCCeEEEEEe-----eCCcCCCCcceeEe
Q 004203 204 ELLAVASGHK-LYIWRYNMREETSSPRIV-LRTRRSLRAVHFHP----HAAPLLLTAE-----VNDLDSSESSLTLA 269 (768)
Q Consensus 204 ~~LatgSdd~-I~IWDl~t~~~~~~~~~l-~~h~~~V~sVaFSP----DG~~LlaS~s-----vwdl~sg~~~~~L~ 269 (768)
++|++++.++ |++||+++++... .+ ..|...|.+++|+| +++++++++. +|+++.+.....+.
T Consensus 227 ~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 227 CVLILGTTRGIIDIWDIRFNVLIR---SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEE---EEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEE
T ss_pred CEEEEEcCCCeEEEEEcCCccEEE---EEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEE
Confidence 9999999655 9999999876533 23 26777999996664 5766666543 78887665544444
No 90
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=7.3e-20 Score=194.54 Aligned_cols=177 Identities=12% Similarity=0.058 Sum_probs=141.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCCC--CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC---------CCeEEEEEe-c
Q 004203 80 ARRGLASWVEAESLHHLRPKYCPLS--PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQ---------TGSCLKVLH-G 147 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~L~--gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~---------tg~~l~~l~-g 147 (768)
++..+++++.|+.|++||+.+++.. -....|.++.|+|+ +++++.|++|++|+.. +++.+..+. +
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 123 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD 123 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecC
Confidence 5678999999999999999876421 11466788889988 9999999999999655 555555554 6
Q ss_pred CCCCcEEEEEcc-CCCCEEEEEeCCCeEEEEECCCCcEEEEe--cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCc
Q 004203 148 HRRTPWVVRFHP-LNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASGH-KLYIWRYNMRE 223 (768)
Q Consensus 148 H~g~V~sVafSP-~dg~lLaSgS~DgtVrLWDl~sg~~i~~l--~h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~ 223 (768)
|.+.|.+++|+| .+++++++++.|++|++||++++++.... .+...+.+++|+|+|.+|++|+.+ .|++||+++++
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT
T ss_pred CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC
Confidence 778899999998 25789999999999999999999987665 355689999999999999998855 59999999887
Q ss_pred cccCCeEeec-CCCCeEEEEEccCCCeEEEEEe----eCCcCC
Q 004203 224 ETSSPRIVLR-TRRSLRAVHFHPHAAPLLLTAE----VNDLDS 261 (768)
Q Consensus 224 ~~~~~~~l~~-h~~~V~sVaFSPDG~~LlaS~s----vwdl~s 261 (768)
.. ...+.. |...|++++|+|+|.+|++++. +||++.
T Consensus 204 ~~--~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~ 244 (343)
T 3lrv_A 204 QA--SSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRK 244 (343)
T ss_dssp SC--CEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTS
T ss_pred CC--ccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCC
Confidence 53 124555 8999999999999998877764 455543
No 91
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=5e-20 Score=195.79 Aligned_cols=171 Identities=11% Similarity=0.010 Sum_probs=138.0
Q ss_pred EEEEeCCCeEEEEeCC---------CCC-----CCCCCCCeEEEEECC--CCCEEEEEeCCCeEEEEeCCCCeEEEEEe-
Q 004203 84 LASWVEAESLHHLRPK---------YCP-----LSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTGSCLKVLH- 146 (768)
Q Consensus 84 LvSgs~DgsIrlWd~~---------t~~-----L~gH~~~VtslafSP--DG~~LaSgS~DgtVrVWDl~tg~~l~~l~- 146 (768)
+++++.|+.|++|+.. +.+ ..+|.+.|.+++|+| ++++|++++.|++|++||+++++....+.
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence 8899999999999765 322 236678999999999 99999999999999999999999877664
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEE-EEe-c-CCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCc
Q 004203 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI-GSR-D-FYRPIASIAFHASGELLAVASGHKLYIWRYNMRE 223 (768)
Q Consensus 147 gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i-~~l-~-h~~~V~svafSPDG~~LatgSdd~I~IWDl~t~~ 223 (768)
.|...|.+++|+| ++.+|++|+.|+.|++||+++++.. ..+ . |...|.+++|+|+|.+|++++++.|++||+++.+
T Consensus 168 ~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 168 KSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp CSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred CCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 4555899999999 9999999999999999999999876 444 3 7899999999999999999998899999999886
Q ss_pred cccCCeEeecCCCCe--EEEEEccCCCeEEEEEe
Q 004203 224 ETSSPRIVLRTRRSL--RAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 224 ~~~~~~~l~~h~~~V--~sVaFSPDG~~LlaS~s 255 (768)
..........+...+ .+++|+|+|+++++++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 247 GTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp TCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred cceeecccccccccccceEEEECCCCCEEEEecC
Confidence 543222222232333 46999999998887553
No 92
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.84 E-value=8.9e-20 Score=190.60 Aligned_cols=172 Identities=10% Similarity=0.144 Sum_probs=142.2
Q ss_pred cCC-CEEEEEeC---CCeEEEEeCCCCCC-----CCCCCCeEEEEECCC---CCEEEEEeCCCeEEEEeCCCCe-EEEEE
Q 004203 79 DAR-RGLASWVE---AESLHHLRPKYCPL-----SPPPRSTIAAAFSPD---GKTLASTHGDHTVKIIDCQTGS-CLKVL 145 (768)
Q Consensus 79 d~g-~~LvSgs~---DgsIrlWd~~t~~L-----~gH~~~VtslafSPD---G~~LaSgS~DgtVrVWDl~tg~-~l~~l 145 (768)
.++ ..+++++. |+.|++||..+++. .+|...|.+++|+|+ |++|++++.|+.|++||+++++ .+..+
T Consensus 28 p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 107 (357)
T 3i2n_A 28 PCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSV 107 (357)
T ss_dssp TTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEE
T ss_pred CCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEE
Confidence 444 44556665 99999999987642 379999999999998 7999999999999999999988 88999
Q ss_pred ecCCCCcEEEEE------ccCCCCEEEEEeCCCeEEEEECCCCc-EEEEec-C----CCCeEEEE----EcCCCCEEEEE
Q 004203 146 HGHRRTPWVVRF------HPLNPTIIASGSLDHEVRLWNASTAE-CIGSRD-F----YRPIASIA----FHASGELLAVA 209 (768)
Q Consensus 146 ~gH~g~V~sVaf------SP~dg~lLaSgS~DgtVrLWDl~sg~-~i~~l~-h----~~~V~sva----fSPDG~~Latg 209 (768)
.+|...|.++.| +| ++++|++++.|+.|++||+++++ .+..+. + ...+.+++ |+|++++|+++
T Consensus 108 ~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 186 (357)
T 3i2n_A 108 KGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAG 186 (357)
T ss_dssp CCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEE
T ss_pred EecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEE
Confidence 999999999965 67 88999999999999999999886 555543 2 33788888 78999999999
Q ss_pred ECC-eEEEEEcCCCccccCCeEeecCCCCeEEEEEcc---CCCeEEEEEe
Q 004203 210 SGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHP---HAAPLLLTAE 255 (768)
Q Consensus 210 Sdd-~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSP---DG~~LlaS~s 255 (768)
+.+ .|++||+++.+.. ....|...|.+++|+| ++.++++++.
T Consensus 187 ~~d~~i~i~d~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~l~~~~~ 232 (357)
T 3i2n_A 187 YDNGDIKLFDLRNMALR----WETNIKNGVCSLEFDRKDISMNKLVATSL 232 (357)
T ss_dssp ETTSEEEEEETTTTEEE----EEEECSSCEEEEEESCSSSSCCEEEEEES
T ss_pred ccCCeEEEEECccCcee----eecCCCCceEEEEcCCCCCCCCEEEEECC
Confidence 964 5999999988652 3567889999999999 8998877764
No 93
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.84 E-value=5.7e-19 Score=207.02 Aligned_cols=190 Identities=16% Similarity=0.229 Sum_probs=163.0
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-eEEEEEec
Q 004203 73 IFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG-SCLKVLHG 147 (768)
Q Consensus 73 l~~a~~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg-~~l~~l~g 147 (768)
.......++..|++++.|+.|++||..++ .+.+|...|++++|+|++++|++++.|+.|++||++++ .....+.+
T Consensus 59 ~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~ 138 (814)
T 3mkq_A 59 RAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG 138 (814)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC
Confidence 33445567889999999999999999876 46789999999999999999999999999999999987 77788999
Q ss_pred CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec--CCCCeEEEEEcC--CCCEEEEEECC-eEEEEEcCCC
Q 004203 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD--FYRPIASIAFHA--SGELLAVASGH-KLYIWRYNMR 222 (768)
Q Consensus 148 H~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~--h~~~V~svafSP--DG~~LatgSdd-~I~IWDl~t~ 222 (768)
|...|.+++|+|.++..+++++.|++|++||+.+++....+. +...+..++|+| ++.+|++++.+ .|++||+.++
T Consensus 139 ~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 218 (814)
T 3mkq_A 139 HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (814)
T ss_dssp CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT
T ss_pred CCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 999999999999778899999999999999999887766543 448899999999 99999999965 4999999887
Q ss_pred ccccCCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcc
Q 004203 223 EETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESS 265 (768)
Q Consensus 223 ~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~ 265 (768)
+... .+..|...|.+++|+|+++++++++. +|++..+...
T Consensus 219 ~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 219 SCVA---TLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp EEEE---EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEE
T ss_pred cEEE---EEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 7533 56678899999999999998887764 7777655433
No 94
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.84 E-value=1.2e-19 Score=192.89 Aligned_cols=215 Identities=16% Similarity=0.185 Sum_probs=162.2
Q ss_pred CeEEEEeCCCC----CCCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEe-------------cCCCCc
Q 004203 91 ESLHHLRPKYC----PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVLH-------------GHRRTP 152 (768)
Q Consensus 91 gsIrlWd~~t~----~L~gH~~~VtslafSP-DG~~LaSgS~DgtVrVWDl~tg~~l~~l~-------------gH~g~V 152 (768)
..+++|+.+.. .+.+|.+.|++++|+| ++++|++++.|+.|++||+++++....+. +|...|
T Consensus 23 ~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 102 (408)
T 4a11_B 23 STRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSV 102 (408)
T ss_dssp HHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCE
T ss_pred CcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcE
Confidence 44556665543 3678999999999999 99999999999999999999876554443 599999
Q ss_pred EEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCC---CEEEEEECC-eEEEEEcCCCccccCC
Q 004203 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASG---ELLAVASGH-KLYIWRYNMREETSSP 228 (768)
Q Consensus 153 ~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG---~~LatgSdd-~I~IWDl~t~~~~~~~ 228 (768)
.+++|+|+++.+|++++.|+.|++||+.+++....+.+...+.++.|+|.+ .++++++.+ .|++||+++++..
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~--- 179 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS--- 179 (408)
T ss_dssp EEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC---
T ss_pred EEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee---
Confidence 999999977889999999999999999999999999999999999999954 488888855 4999999887653
Q ss_pred eEeecCCCCeEEEEEccCCCeEEEEEe------eCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCCC
Q 004203 229 RIVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLI 302 (768)
Q Consensus 229 ~~l~~h~~~V~sVaFSPDG~~LlaS~s------vwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~ 302 (768)
..+..|...|.+++|+|+++++++++. +|+++........ ...+ .......+.......
T Consensus 180 ~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~--~~~~-------------~~~~~~~~~~~~~~~ 244 (408)
T 4a11_B 180 HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLIT--LDQH-------------NGKKSQAVESANTAH 244 (408)
T ss_dssp EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEE--CCTT-------------TTCSCCCTTTSSCSC
T ss_pred eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccc--cccc-------------ccccceeeccccccc
Confidence 366779999999999999997554443 6666543321111 1111 000111111122234
Q ss_pred CCCceEEEEecCCCEEEEEec
Q 004203 303 TPPFLRPSFVRDDERISLQHT 323 (768)
Q Consensus 303 slpil~psFSpDG~rIv~~~~ 323 (768)
..++....|+||++.|+....
T Consensus 245 ~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 245 NGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp SSCEEEEEECTTSSEEEEEET
T ss_pred cCceeEEEEcCCCCEEEEecC
Confidence 456778999999999997544
No 95
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=7.9e-19 Score=193.70 Aligned_cols=232 Identities=14% Similarity=0.119 Sum_probs=172.0
Q ss_pred CCEEEEEeCC------CeEEEEeCCCC---CCCCCCCCeEEEEECCCCCEEEEEeCCC---eEEEEeCCCCeEEEEEecC
Q 004203 81 RRGLASWVEA------ESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDH---TVKIIDCQTGSCLKVLHGH 148 (768)
Q Consensus 81 g~~LvSgs~D------gsIrlWd~~t~---~L~gH~~~VtslafSPDG~~LaSgS~Dg---tVrVWDl~tg~~l~~l~gH 148 (768)
+.+++..+.+ +.|++||.... .+.+|...|.+++|+|||++|++++.|+ .|++||+++++.. .+..|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~ 221 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASF 221 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecC
Confidence 4566666554 79999999754 3668999999999999999999999885 9999999999875 56678
Q ss_pred CCCcEEEEEccCCCCEEE-EEeCCC--eEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEC-C---eEEEEEcCC
Q 004203 149 RRTPWVVRFHPLNPTIIA-SGSLDH--EVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG-H---KLYIWRYNM 221 (768)
Q Consensus 149 ~g~V~sVafSP~dg~lLa-SgS~Dg--tVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSd-d---~I~IWDl~t 221 (768)
.+.+.+++|+| |++.|+ +++.|+ .|++||+.+++......+...+.+++|+|||++|+++++ + .|++||+.+
T Consensus 222 ~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 222 PRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp SSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred CCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 88899999999 888776 666665 499999999988666678889999999999999998885 3 388889887
Q ss_pred CccccCCeEeecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCC
Q 004203 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPL 301 (768)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~ 301 (768)
++. ..+..+...+..++|+|||++|++++.... ...+.+++..++....+...
T Consensus 301 ~~~----~~l~~~~~~~~~~~~spdG~~l~~~~~~~g--------------------~~~i~~~d~~~~~~~~l~~~--- 353 (415)
T 2hqs_A 301 GAP----QRITWEGSQNQDADVSSDGKFMVMVSSNGG--------------------QQHIAKQDLATGGVQVLSST--- 353 (415)
T ss_dssp SCC----EECCCSSSEEEEEEECTTSSEEEEEEECSS--------------------CEEEEEEETTTCCEEECCCS---
T ss_pred CCE----EEEecCCCcccCeEECCCCCEEEEEECcCC--------------------ceEEEEEECCCCCEEEecCC---
Confidence 653 234456678999999999998887764311 01355555444333222111
Q ss_pred CCCCceEEEEecCCCEEEEEecCCCCCcceEEeccCCCceeee
Q 004203 302 ITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRL 344 (768)
Q Consensus 302 ~slpil~psFSpDG~rIv~~~~d~~~Gs~~~~~~~~ss~~~rl 344 (768)
. ....++|+|||+.|++...+.. ...++..+..+....+|
T Consensus 354 -~-~~~~~~~spdg~~l~~~s~~~~-~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 354 -F-LDETPSLAPNGTMVIYSSSQGM-GSVLNLVSTDGRFKARL 393 (415)
T ss_dssp -S-SCEEEEECTTSSEEEEEEEETT-EEEEEEEETTSCCEEEC
T ss_pred -C-CcCCeEEcCCCCEEEEEEcCCC-ccEEEEEECCCCcEEEe
Confidence 1 4568999999999998755442 23456666665554433
No 96
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.83 E-value=3.4e-19 Score=190.67 Aligned_cols=144 Identities=13% Similarity=0.118 Sum_probs=129.2
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcE
Q 004203 80 ARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~ 153 (768)
++..|++++.|+.|++||+.... ..+|...|.+++|+|++++|++++.|+.|++||+ +++.+..+.+|.+.|.
T Consensus 130 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~ 208 (383)
T 3ei3_B 130 NTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVT 208 (383)
T ss_dssp EEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEE
Confidence 56889999999999999998652 2355688999999999999999999999999999 5788899999999999
Q ss_pred EEEEccCCCC-EEEEEeCCCeEEEEECCC----CcEEEEecCCCCeEEEEEcC-CCCEEEEEEC-CeEEEEEcCCCccc
Q 004203 154 VVRFHPLNPT-IIASGSLDHEVRLWNAST----AECIGSRDFYRPIASIAFHA-SGELLAVASG-HKLYIWRYNMREET 225 (768)
Q Consensus 154 sVafSP~dg~-lLaSgS~DgtVrLWDl~s----g~~i~~l~h~~~V~svafSP-DG~~LatgSd-d~I~IWDl~t~~~~ 225 (768)
+++|+| +++ ++++++.|++|++||+++ ++++..+.|...|.+++|+| ++++|++++. +.|++||+++.+..
T Consensus 209 ~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~ 286 (383)
T 3ei3_B 209 HAEFNP-RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKP 286 (383)
T ss_dssp EEEECS-SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSC
T ss_pred EEEECC-CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 999999 666 999999999999999998 67788888999999999999 9999999995 45999999887653
No 97
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.83 E-value=2.3e-18 Score=176.47 Aligned_cols=170 Identities=13% Similarity=0.161 Sum_probs=144.2
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC-------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEec
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC-------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~-------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~g 147 (768)
.....++..+++++.|+.|++|++... .+.+|...|.++.| ++++|++++.|+.|++|| .++....+..
T Consensus 65 ~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~ 140 (313)
T 3odt_A 65 VCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQA 140 (313)
T ss_dssp EEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEEC
T ss_pred EEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEeccc
Confidence 445567889999999999999998753 36689999999999 688999999999999999 6788899999
Q ss_pred CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec--CCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCcc
Q 004203 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREE 224 (768)
Q Consensus 148 H~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~--h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~ 224 (768)
|...+.++.|+|.+++++++++.|+.|++||. ++....+. +...+.+++|+|++. |++++ ++.|++||+++++.
T Consensus 141 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~ 217 (313)
T 3odt_A 141 HNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDV 217 (313)
T ss_dssp CSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCE
T ss_pred CCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhh
Confidence 99999999999878999999999999999994 44444443 888999999999999 66777 45599999998875
Q ss_pred ccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 225 TSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 225 ~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
.. .+..|...|.+++|+|++. +++++.
T Consensus 218 ~~---~~~~~~~~i~~~~~~~~~~-l~~~~~ 244 (313)
T 3odt_A 218 LR---TYEGHESFVYCIKLLPNGD-IVSCGE 244 (313)
T ss_dssp EE---EEECCSSCEEEEEECTTSC-EEEEET
T ss_pred hh---hhhcCCceEEEEEEecCCC-EEEEec
Confidence 43 5667899999999999995 666553
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.83 E-value=1.1e-19 Score=197.20 Aligned_cols=233 Identities=12% Similarity=0.160 Sum_probs=167.6
Q ss_pred CEEEEEeCCCeEEEEeCCCCC--------------------------------------------CCCCCCCeEEEEECC
Q 004203 82 RGLASWVEAESLHHLRPKYCP--------------------------------------------LSPPPRSTIAAAFSP 117 (768)
Q Consensus 82 ~~LvSgs~DgsIrlWd~~t~~--------------------------------------------L~gH~~~VtslafSP 117 (768)
..+++++.|+.|++|++.... +.+|...|++++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 689999999999999987521 368999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCC-CeEEEE-------EecCCCCcEEEEEccCCC-CEEEEEeCCCeEEEEECCCCcE----
Q 004203 118 DGKTLASTHGDHTVKIIDCQT-GSCLKV-------LHGHRRTPWVVRFHPLNP-TIIASGSLDHEVRLWNASTAEC---- 184 (768)
Q Consensus 118 DG~~LaSgS~DgtVrVWDl~t-g~~l~~-------l~gH~g~V~sVafSP~dg-~lLaSgS~DgtVrLWDl~sg~~---- 184 (768)
++++|+++ .|+.|++||+++ ++.+.. +.+|...|.+++|+| ++ ++|++++.|++|++||+++++.
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 99999998 899999999984 444442 568999999999999 66 9999999999999999999886
Q ss_pred EEEec-CCC------------CeEEEEEcCCCCEEEEEECCeEEEEEcCC-CccccCCeEeecCCC--------------
Q 004203 185 IGSRD-FYR------------PIASIAFHASGELLAVASGHKLYIWRYNM-REETSSPRIVLRTRR-------------- 236 (768)
Q Consensus 185 i~~l~-h~~------------~V~svafSPDG~~LatgSdd~I~IWDl~t-~~~~~~~~~l~~h~~-------------- 236 (768)
...+. +.. .|.+++|+|+|++|++++++.|++||+++ ++... .+..|..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVE---TYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSC---CEESCGGGTTTHHHHHHTSGG
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccc---eeecccccccccccccccccc
Confidence 55554 443 89999999999999999996699999987 44322 3444432
Q ss_pred -CeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCccc----CCCCeEEEecCCCCCCCCcccccCCCCCCc
Q 004203 237 -SLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR----YPPPVICMAGAHSSSHPGLAEEVPLITPPF 306 (768)
Q Consensus 237 -~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~----~p~~~V~l~d~~s~d~~~L~~~~~~~slpi 306 (768)
.+..++|+|++++|++++. +|++..++.. .+........ .+...+.... ......+.........++
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i 419 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASG--KRKKDEISVDSLDFNKKI 419 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSS--CCCTTCEEGGGCCTTSCC
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccC--CcccccccccccccCCce
Confidence 1334999999998877654 7888765432 2222211110 1111111111 111122222233445567
Q ss_pred eEEEEecCCCEEEEEe
Q 004203 307 LRPSFVRDDERISLQH 322 (768)
Q Consensus 307 l~psFSpDG~rIv~~~ 322 (768)
+..+|+|++..|++..
T Consensus 420 ~~~~~~p~~~~la~~~ 435 (447)
T 3dw8_B 420 LHTAWHPKENIIAVAT 435 (447)
T ss_dssp CEEEECSSSSEEEEEC
T ss_pred eEEEECCCCCEEEEEe
Confidence 7899999999998753
No 99
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.83 E-value=2.5e-18 Score=188.58 Aligned_cols=230 Identities=13% Similarity=0.219 Sum_probs=177.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEE
Q 004203 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sV 155 (768)
++..|++++.|+.|++||..++ .+.+|...|.+++|+ +++|++++.|++|++||+++++.+..+.+|...|.++
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~ 205 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM 205 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEE
Confidence 4789999999999999999876 478999999999998 6799999999999999999999999999999999999
Q ss_pred EEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEeec
Q 004203 156 RFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIVLR 233 (768)
Q Consensus 156 afSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~~~~~~l~~ 233 (768)
.|++ +.+++++.|++|++||+++++.+..+ .|...|.+++| ++++|++++.+ .|++||+++++... .+..
T Consensus 206 ~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~ 277 (445)
T 2ovr_B 206 HLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLH---TLQG 277 (445)
T ss_dssp EEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEE---EECC
T ss_pred EecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeE---EecC
Confidence 9964 78999999999999999999988776 58889999999 78889999855 49999999887543 5667
Q ss_pred CCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCccc------------CCCCeEEEecCCCCCCCCcc
Q 004203 234 TRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR------------YPPPVICMAGAHSSSHPGLA 296 (768)
Q Consensus 234 h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~------------~p~~~V~l~d~~s~d~~~L~ 296 (768)
|...|.++.| ++.++++++. +|+++.++....+..+.+... .....+.+|+..++......
T Consensus 278 ~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 355 (445)
T 2ovr_B 278 HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTL 355 (445)
T ss_dssp CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 8899999999 7887777764 778776654443332221110 12345677776555443333
Q ss_pred cccCCCCCCceEEEEecCCCEEEEEec
Q 004203 297 EEVPLITPPFLRPSFVRDDERISLQHT 323 (768)
Q Consensus 297 ~~~~~~slpil~psFSpDG~rIv~~~~ 323 (768)
........++....| +++.|+....
T Consensus 356 ~~~~~~~~~v~~~~~--~~~~l~s~~~ 380 (445)
T 2ovr_B 356 QGPNKHQSAVTCLQF--NKNFVITSSD 380 (445)
T ss_dssp CSTTSCSSCEEEEEE--CSSEEEEEET
T ss_pred ccCCCCCCCEEEEEE--CCCEEEEEeC
Confidence 332233445555555 4566666443
No 100
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.83 E-value=9.4e-20 Score=209.68 Aligned_cols=231 Identities=10% Similarity=0.013 Sum_probs=169.7
Q ss_pred eEEEEEecCCCEEEEEeCCCeEEEEeCCCC--CCCCCCC-----CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe----
Q 004203 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC--PLSPPPR-----STIAAAFSPDGKTLASTHGDHTVKIIDCQTGS---- 140 (768)
Q Consensus 72 ~l~~a~~d~g~~LvSgs~DgsIrlWd~~t~--~L~gH~~-----~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~---- 140 (768)
....+.+.++..|++++.|+.|++||.+.. .+. |.. .|.+++|||||++||+|+.||+|+|||+++++
T Consensus 88 V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~ 166 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTP 166 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCC
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccc
Confidence 455666789999999999999999996543 345 554 59999999999999999999999999999885
Q ss_pred ---EEEEE----ecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEE---EEe--cCCCCeEEEEEcCCCCEEEE
Q 004203 141 ---CLKVL----HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI---GSR--DFYRPIASIAFHASGELLAV 208 (768)
Q Consensus 141 ---~l~~l----~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i---~~l--~h~~~V~svafSPDG~~Lat 208 (768)
.+..+ .+|...|.+++|+| ++ +++++.|++|++||+.+++.. .++ .|...|.+++|+ |+.|++
T Consensus 167 ~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LAS 241 (588)
T 2j04_A 167 EFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVL 241 (588)
T ss_dssp CCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEE
T ss_pred cceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEE
Confidence 35776 67778999999999 77 888899999999999987742 344 477899999999 689999
Q ss_pred EECCeEEEEEcCCCccccCCeEeecCCCCeEEEEE--ccCCCeEEEEEe----eCCcCCCCcceeEeecCCcc-cCCCCe
Q 004203 209 ASGHKLYIWRYNMREETSSPRIVLRTRRSLRAVHF--HPHAAPLLLTAE----VNDLDSSESSLTLATSPGYW-RYPPPV 281 (768)
Q Consensus 209 gSdd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaF--SPDG~~LlaS~s----vwdl~sg~~~~~L~t~~G~~-~~p~~~ 281 (768)
+++++|++||+.++.... ...+|...|..+.| +||+..++++.+ +|..+. .. ...++.. ......
T Consensus 242 a~~~tIkLWd~~~~~~~~---~~~gh~~~V~~va~~~s~d~~~La~a~edG~klw~~d~----~~-~spd~~l~a~~d~~ 313 (588)
T 2j04_A 242 TCPGYVHKIDLKNYSISS---LKTGSLENFHIIPLNHEKESTILLMSNKTSYKVLLEDE----LH-VTADNIIAPYLEKK 313 (588)
T ss_dssp ECSSEEEEEETTTTEEEE---EECSCCSCCCEEEETTCSSCEEEEECSSCEEEEEESSS----EE-EECCCSSHHHHHHH
T ss_pred EeCCeEEEEECCCCeEEE---EEcCCCceEEEEEeeeCCCCCEEEEEcCCCCEEEeecc----EE-ECCCceEEEEcCCE
Confidence 998889999998876522 34489999999999 999987666542 444431 11 1111110 001233
Q ss_pred EEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEE
Q 004203 282 ICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQ 321 (768)
Q Consensus 282 V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~ 321 (768)
+.+|+..... .... .. ...+...+|||||+.++..
T Consensus 314 v~lW~~~g~~-l~~~---~~-~~~I~~va~SPdG~~lA~~ 348 (588)
T 2j04_A 314 FKKWSTIWNE-FNNY---ET-TLVIHGISLSPDGYSIAIV 348 (588)
T ss_dssp HHHTTTTTTS-SSSS---CC-EEEEEEEEECTTSSEEEEE
T ss_pred EEEEECCCCc-eeee---cc-ceEEEEEEECCCCCEEEEE
Confidence 4555533222 1111 11 2234579999999999873
No 101
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.83 E-value=1.7e-18 Score=189.44 Aligned_cols=156 Identities=21% Similarity=0.388 Sum_probs=134.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe----EEEEEecCCCCcEEEEEccCCCCEEEEE--eCCCeEEE
Q 004203 103 LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS----CLKVLHGHRRTPWVVRFHPLNPTIIASG--SLDHEVRL 176 (768)
Q Consensus 103 L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~----~l~~l~gH~g~V~sVafSP~dg~lLaSg--S~DgtVrL 176 (768)
+.+|...+..+.|+|++++|++++.|+.|++||..+++ .+..+..|.+.|.+++|+|.+..+++++ +.|++|++
T Consensus 226 ~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~i 305 (420)
T 4gga_A 226 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 305 (420)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEE
T ss_pred ecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEE
Confidence 35788889999999999999999999999999998765 3567788999999999999777887764 57999999
Q ss_pred EECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE---CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEE
Q 004203 177 WNASTAECIGSRDFYRPIASIAFHASGELLAVAS---GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 177 WDl~sg~~i~~l~h~~~V~svafSPDG~~LatgS---dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
||+.++++...+.+...+.++.|+|+++.|++++ ++.|+|||+.+++... .+.+|...|++++|+|||++|+++
T Consensus 306 wd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~---~l~gH~~~V~~l~~spdg~~l~S~ 382 (420)
T 4gga_A 306 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA---ELKGHTSRVLSLTMSPDGATVASA 382 (420)
T ss_dssp EETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSSCEEEE
T ss_pred EeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEE---EEcCCCCCEEEEEEcCCCCEEEEE
Confidence 9999999999998889999999999999998876 3459999999887644 677899999999999999988887
Q ss_pred Ee-----eCCcCC
Q 004203 254 AE-----VNDLDS 261 (768)
Q Consensus 254 ~s-----vwdl~s 261 (768)
+. +|++..
T Consensus 383 s~D~tvriWdv~~ 395 (420)
T 4gga_A 383 AADETLRLWRCFE 395 (420)
T ss_dssp ETTTEEEEECCSC
T ss_pred ecCCeEEEEECCC
Confidence 65 666653
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.82 E-value=2e-18 Score=190.52 Aligned_cols=160 Identities=11% Similarity=0.116 Sum_probs=135.0
Q ss_pred CCCCCeEEEEECCCCCEE-EEEeCCCeEEEEeCC--CCeEEEEEe--cCCCCcEEEEEccCCCCEEEEEeCCCeEEEEEC
Q 004203 105 PPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQ--TGSCLKVLH--GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNA 179 (768)
Q Consensus 105 gH~~~VtslafSPDG~~L-aSgS~DgtVrVWDl~--tg~~l~~l~--gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl 179 (768)
+|...|++++|+|||++| ++++.|+.|++||+. +++.+..+. .|...|.+++|+| ++++|++++.|+.|++||+
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEEEEET
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CCCEEEEEeCCCcEEEEec
Confidence 456689999999999996 899999999999999 888888886 5678899999999 9999999999999999999
Q ss_pred CCCcEEE----E-ecCCCCeEEEEEcCC---CCEEEEEECC-eEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeE
Q 004203 180 STAECIG----S-RDFYRPIASIAFHAS---GELLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPL 250 (768)
Q Consensus 180 ~sg~~i~----~-l~h~~~V~svafSPD---G~~LatgSdd-~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~L 250 (768)
.+++... . ..|...|.+++|+|+ +++|++++.+ .|++||++++.... ....+|...|.+++|+ ++++|
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVD--KWLFGHKHFVSSICCG-KDYLL 255 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEE--EECCCCSSCEEEEEEC-STTEE
T ss_pred CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceee--eeecCCCCceEEEEEC-CCCEE
Confidence 9877553 3 458899999999999 9999999965 59999998876533 1245789999999999 99988
Q ss_pred EEEEe-----eCCcCCCCcceeE
Q 004203 251 LLTAE-----VNDLDSSESSLTL 268 (768)
Q Consensus 251 laS~s-----vwdl~sg~~~~~L 268 (768)
++++. +|++..++....+
T Consensus 256 ~s~~~d~~v~vwd~~~~~~~~~~ 278 (450)
T 2vdu_B 256 LSAGGDDKIFAWDWKTGKNLSTF 278 (450)
T ss_dssp EEEESSSEEEEEETTTCCEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEeeee
Confidence 87765 8888877654444
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.82 E-value=6.4e-19 Score=183.76 Aligned_cols=176 Identities=10% Similarity=0.048 Sum_probs=144.8
Q ss_pred EEEecCCC-EEEEEeCCCeEEEEeC-CCC---CCCC--CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC---------
Q 004203 75 EAGRDARR-GLASWVEAESLHHLRP-KYC---PLSP--PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT--------- 138 (768)
Q Consensus 75 ~a~~d~g~-~LvSgs~DgsIrlWd~-~t~---~L~g--H~~~VtslafSPDG~~LaSgS~DgtVrVWDl~t--------- 138 (768)
.....++. .|++++.|+.|++||+ ... .+.+ |...|.+++|+| +++|++++.|+.|++||+++
T Consensus 62 ~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 140 (342)
T 1yfq_A 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVK 140 (342)
T ss_dssp EEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEE
T ss_pred EEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccccccccc
Confidence 33444677 8999999999999999 766 4677 999999999999 99999999999999999987
Q ss_pred CeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC-CcEE---EEecCCCCeEEEEEcC-CCCEEEEEECC-
Q 004203 139 GSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST-AECI---GSRDFYRPIASIAFHA-SGELLAVASGH- 212 (768)
Q Consensus 139 g~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~s-g~~i---~~l~h~~~V~svafSP-DG~~LatgSdd- 212 (768)
++++..+. |...|.+++|+| ++ +++++.|+.|++||+++ +... ....+...+.+++|+| ++++|++++.+
T Consensus 141 ~~~~~~~~-~~~~v~~~~~~~-~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg 216 (342)
T 1yfq_A 141 NLNSNNTK-VKNKIFTMDTNS-SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG 216 (342)
T ss_dssp ESCSSSSS-SCCCEEEEEECS-SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS
T ss_pred CCeeeEEe-eCCceEEEEecC-Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCC
Confidence 76666666 889999999999 54 99999999999999998 5532 3345788999999999 99999999965
Q ss_pred eEEEEEcCCC--cc-ccCCeEeecCCC---------CeEEEEEccCCCeEEEEEe
Q 004203 213 KLYIWRYNMR--EE-TSSPRIVLRTRR---------SLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 213 ~I~IWDl~t~--~~-~~~~~~l~~h~~---------~V~sVaFSPDG~~LlaS~s 255 (768)
.|++||++.. .. ......+..|.. .|.+++|+|++++|++++.
T Consensus 217 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 271 (342)
T 1yfq_A 217 RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS 271 (342)
T ss_dssp EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET
T ss_pred cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC
Confidence 5999999876 10 012334555644 9999999999998887764
No 104
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.82 E-value=3.2e-18 Score=187.76 Aligned_cols=244 Identities=14% Similarity=0.163 Sum_probs=186.6
Q ss_pred CCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEE
Q 004203 81 RRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVR 156 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVa 156 (768)
+..+++++.|+.|++||..++ .+.+|...|.++.|+ +++|++++.|++|++||+++++.+..+.+|...|.++.
T Consensus 169 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 246 (445)
T 2ovr_B 169 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ 246 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEE
Confidence 568999999999999999876 477999999999995 67899999999999999999999999999999999999
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCccccCCeEeecC
Q 004203 157 FHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG-HKLYIWRYNMREETSSPRIVLRT 234 (768)
Q Consensus 157 fSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSd-d~I~IWDl~t~~~~~~~~~l~~h 234 (768)
| +++++++++.|+.|++||+++++++..+. |...|.+++| ++.+|++++. +.|++||+++++... .+..|
T Consensus 247 ~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~---~~~~~ 318 (445)
T 2ovr_B 247 Y---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIH---TLTGH 318 (445)
T ss_dssp E---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEE---EECCC
T ss_pred E---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEE---EEcCC
Confidence 8 56889999999999999999999888875 7889999999 7899999995 459999999887543 56678
Q ss_pred CCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCccc---------------CCCCeEEEecCCCCCCCC
Q 004203 235 RRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR---------------YPPPVICMAGAHSSSHPG 294 (768)
Q Consensus 235 ~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~t~~G~~~---------------~p~~~V~l~d~~s~d~~~ 294 (768)
...+.++.++ ++++++++. +|+++.+.....+....++.. .....+.+|+..++....
T Consensus 319 ~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 319 QSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp CSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred cccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceee
Confidence 8889888874 566666654 778776655444443222211 123567778766655433
Q ss_pred ccc--ccCCCCCCceEEEEecCCCEEEEEecCCCCCcceEEecc
Q 004203 295 LAE--EVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSL 336 (768)
Q Consensus 295 L~~--~~~~~slpil~psFSpDG~rIv~~~~d~~~Gs~~~~~~~ 336 (768)
... .......+++..+|+||+..+++...+........+.+.
T Consensus 397 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 397 NLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp EEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred eeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 321 112334467789999999888886555443333444443
No 105
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.82 E-value=3.3e-18 Score=187.74 Aligned_cols=178 Identities=16% Similarity=0.293 Sum_probs=151.7
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEE
Q 004203 79 DARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~s 154 (768)
-++..+++++.|+.|++||..++ .+.+|...|.+++| ++++|++|+.||+|++||+++++.+..+.+|...|.+
T Consensus 141 ~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 218 (435)
T 1p22_A 141 YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLH 218 (435)
T ss_dssp CCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEE
T ss_pred ECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEE
Confidence 47889999999999999999876 47799999999999 7899999999999999999999999999999999999
Q ss_pred EEEccCCCCEEEEEeCCCeEEEEECCCCcEE---EE-ecCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCe
Q 004203 155 VRFHPLNPTIIASGSLDHEVRLWNASTAECI---GS-RDFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPR 229 (768)
Q Consensus 155 VafSP~dg~lLaSgS~DgtVrLWDl~sg~~i---~~-l~h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~~~~~ 229 (768)
+.|++ +.+++++.|++|++||+++++.. .. ..|...|.+++| ++++|++++.+ .|++||+++++...
T Consensus 219 l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~--- 290 (435)
T 1p22_A 219 LRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVR--- 290 (435)
T ss_dssp EECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEE---
T ss_pred EEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEE---
Confidence 99975 59999999999999999987754 22 358889999999 78899999955 59999999887544
Q ss_pred EeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeE
Q 004203 230 IVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTL 268 (768)
Q Consensus 230 ~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L 268 (768)
.+..|...|.++.|+ ++++++++. +||++.+.....+
T Consensus 291 ~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~ 332 (435)
T 1p22_A 291 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL 332 (435)
T ss_dssp EEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 567789999999994 566776654 7788766544444
No 106
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.81 E-value=5.5e-19 Score=192.45 Aligned_cols=194 Identities=13% Similarity=0.116 Sum_probs=155.1
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCC---CCC--------------CCC--CCCCeEEEE--ECCCCCEEEEEeCCCeEEE
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPK---YCP--------------LSP--PPRSTIAAA--FSPDGKTLASTHGDHTVKI 133 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~---t~~--------------L~g--H~~~Vtsla--fSPDG~~LaSgS~DgtVrV 133 (768)
.+...++..|++++.|+.|++||+. .++ +.. +...+.++. +++++++|++++.|+.|++
T Consensus 117 ~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i 196 (437)
T 3gre_A 117 ITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVII 196 (437)
T ss_dssp EEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEE
T ss_pred EEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 3445678899999999999999984 221 112 667788887 6689999999999999999
Q ss_pred EeCCCCeEEEEEec--CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe--cCCCCeEEEEEcC----CCCE
Q 004203 134 IDCQTGSCLKVLHG--HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFHA----SGEL 205 (768)
Q Consensus 134 WDl~tg~~l~~l~g--H~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l--~h~~~V~svafSP----DG~~ 205 (768)
||+++++++..+.+ |.+.|.+++|+| ++++|++++.|++|++||+++++++..+ .+...|.+++|+| ++.+
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~ 275 (437)
T 3gre_A 197 FDIRTLERLQIIENSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVI 275 (437)
T ss_dssp EETTTCCEEEEEECCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEE
T ss_pred EeCCCCeeeEEEccCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccE
Confidence 99999999999998 889999999999 8999999999999999999999998876 5777899996664 6779
Q ss_pred EEEEECCe-EEEEEcCCCccccCCe---------------------Eeec--CCCCeEEEEEccCCCeEEEEEe-----e
Q 004203 206 LAVASGHK-LYIWRYNMREETSSPR---------------------IVLR--TRRSLRAVHFHPHAAPLLLTAE-----V 256 (768)
Q Consensus 206 LatgSdd~-I~IWDl~t~~~~~~~~---------------------~l~~--h~~~V~sVaFSPDG~~LlaS~s-----v 256 (768)
|++++.++ |++||+++++...... .+.+ |...|++++|+ ++++|++++. +
T Consensus 276 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~ 354 (437)
T 3gre_A 276 VVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVM 354 (437)
T ss_dssp EEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEE
T ss_pred EEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEE
Confidence 99998666 9999999876432000 0111 56678999999 7776666654 8
Q ss_pred CCcCCCCcceeEee
Q 004203 257 NDLDSSESSLTLAT 270 (768)
Q Consensus 257 wdl~sg~~~~~L~t 270 (768)
|++..++....+..
T Consensus 355 wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 355 FSLNELSSSKAVIS 368 (437)
T ss_dssp EETTCGGGCEEEEC
T ss_pred EECCCcccceEEec
Confidence 88887766655554
No 107
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.81 E-value=1.7e-18 Score=180.87 Aligned_cols=176 Identities=13% Similarity=0.143 Sum_probs=142.2
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCC---CCCCCCCCeEEEEE--CCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCC-
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYC---PLSPPPRSTIAAAF--SPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR- 149 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~---~L~gH~~~Vtslaf--SPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~- 149 (768)
....++..|++++.|+.|++||..+. .+.+|...|.+++| ++++++|++++.|+.|++||+++++.+..+..+.
T Consensus 93 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 172 (368)
T 3mmy_A 93 CWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER 172 (368)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC
T ss_pred EECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC
Confidence 34457889999999999999999877 35689999999999 9999999999999999999999988777766543
Q ss_pred ----------------------------------------CCcEEEEEccCCCC----EEEEEeCCCeEEEEECCCC---
Q 004203 150 ----------------------------------------RTPWVVRFHPLNPT----IIASGSLDHEVRLWNASTA--- 182 (768)
Q Consensus 150 ----------------------------------------g~V~sVafSP~dg~----lLaSgS~DgtVrLWDl~sg--- 182 (768)
..+.++.+.+ +.. .+++++.|+.|++||++..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~~~~~~~~ 251 (368)
T 3mmy_A 173 CYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-DKQNKPTGFALGSIEGRVAIHYINPPNPA 251 (368)
T ss_dssp EEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-CTTSCEEEEEEEETTSEEEEEESSCSCHH
T ss_pred ceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcc-cCCCCCCeEEEecCCCcEEEEecCCCCcc
Confidence 2233444444 333 2899999999999999886
Q ss_pred cEEEEec-CCC------------CeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCC
Q 004203 183 ECIGSRD-FYR------------PIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAA 248 (768)
Q Consensus 183 ~~i~~l~-h~~------------~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~ 248 (768)
+....+. |.. .|.+++|+|++++|++++.+ .|++||+.+++... .+..|...|++++|+|+|+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~~v~~~~~s~~g~ 328 (368)
T 3mmy_A 252 KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK---TSEQLDQPISACCFNHNGN 328 (368)
T ss_dssp HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE---ECCCCSSCEEEEEECTTSS
T ss_pred ccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE---EecCCCCCceEEEECCCCC
Confidence 3333332 332 69999999999999999955 49999999887644 5667899999999999999
Q ss_pred eEEEEEe
Q 004203 249 PLLLTAE 255 (768)
Q Consensus 249 ~LlaS~s 255 (768)
+|++++.
T Consensus 329 ~l~~~s~ 335 (368)
T 3mmy_A 329 IFAYASS 335 (368)
T ss_dssp CEEEEEC
T ss_pred eEEEEec
Confidence 8888876
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.81 E-value=1.1e-18 Score=192.70 Aligned_cols=175 Identities=14% Similarity=0.072 Sum_probs=148.3
Q ss_pred EEEecCCCEE-EEEeCCCeEEEEeCC--CCC----CC--CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEE--
Q 004203 75 EAGRDARRGL-ASWVEAESLHHLRPK--YCP----LS--PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK-- 143 (768)
Q Consensus 75 ~a~~d~g~~L-vSgs~DgsIrlWd~~--t~~----L~--gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~-- 143 (768)
.+...++..| ++++.|+.|++||+. .+. +. .|...|++++|+|++++|++++.|+.|++||+.+++...
T Consensus 108 ~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 108 LRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCC
T ss_pred EEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccccc
Confidence 3445567775 899999999999998 542 32 677899999999999999999999999999998877544
Q ss_pred --EEecCCCCcEEEEEccCC---CCEEEEEeCCCeEEEEECCCCcEEEE-e-cCCCCeEEEEEcCCCCEEEEEECC-eEE
Q 004203 144 --VLHGHRRTPWVVRFHPLN---PTIIASGSLDHEVRLWNASTAECIGS-R-DFYRPIASIAFHASGELLAVASGH-KLY 215 (768)
Q Consensus 144 --~l~gH~g~V~sVafSP~d---g~lLaSgS~DgtVrLWDl~sg~~i~~-l-~h~~~V~svafSPDG~~LatgSdd-~I~ 215 (768)
.+.+|...|.+++|+| + +++|++++.|++|++||+++++.+.. + +|...|.+++|+ ++++|++++.+ .|+
T Consensus 188 ~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~ 265 (450)
T 2vdu_B 188 QEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIF 265 (450)
T ss_dssp CCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEE
T ss_pred ceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEE
Confidence 7788999999999999 7 88999999999999999999988776 3 588999999999 99999999955 599
Q ss_pred EEEcCCCccccCCeEee-------------------------cCCCCeEEEEEccCCCeEEEEE
Q 004203 216 IWRYNMREETSSPRIVL-------------------------RTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 216 IWDl~t~~~~~~~~~l~-------------------------~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
+||+++++... .+. .....|..+.|+|+++++++++
T Consensus 266 vwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 266 AWDWKTGKNLS---TFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp EEETTTCCEEE---EEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred EEECCCCcEee---eecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 99999887533 111 2346799999999999888877
No 109
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.81 E-value=1.2e-18 Score=191.60 Aligned_cols=174 Identities=16% Similarity=0.209 Sum_probs=143.5
Q ss_pred CEEEEEeCCCeEEEEeCCCC-----------CCCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCCCC---eEEEEEe
Q 004203 82 RGLASWVEAESLHHLRPKYC-----------PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTG---SCLKVLH 146 (768)
Q Consensus 82 ~~LvSgs~DgsIrlWd~~t~-----------~L~gH~~~VtslafSP-DG~~LaSgS~DgtVrVWDl~tg---~~l~~l~ 146 (768)
..|++++.|+.|++|++... .+.+|...|.+++|+| ++.+|++++.|+.|++||++++ +.+..+.
T Consensus 195 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~ 274 (430)
T 2xyi_A 195 GYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD 274 (430)
T ss_dssp TEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee
Confidence 38999999999999999862 3568999999999999 7889999999999999999987 5778888
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC-CcEEEEe-cCCCCeEEEEEcCCCC-EEEEEEC-CeEEEEEcCCC
Q 004203 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST-AECIGSR-DFYRPIASIAFHASGE-LLAVASG-HKLYIWRYNMR 222 (768)
Q Consensus 147 gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~s-g~~i~~l-~h~~~V~svafSPDG~-~LatgSd-d~I~IWDl~t~ 222 (768)
.|...|++++|+|++..++++++.|++|++||+++ ++++..+ .|...|.+++|+|+++ +|++++. +.|++||+...
T Consensus 275 ~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 275 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 99999999999994445899999999999999998 4555555 4889999999999996 6778874 55999999873
Q ss_pred ccc-----------cCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 223 EET-----------SSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 223 ~~~-----------~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
... .......+|...|++++|+|+++++++++.
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE
T ss_pred ccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE
Confidence 321 112334567889999999999995555544
No 110
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.81 E-value=3.7e-18 Score=192.13 Aligned_cols=190 Identities=12% Similarity=0.089 Sum_probs=160.2
Q ss_pred EEEEEec--CCCEEEEEeCCCeEEEEeCCCC------------CCCCCCCCeEEEEECCCCCEEEEEeCC----CeEEEE
Q 004203 73 IFEAGRD--ARRGLASWVEAESLHHLRPKYC------------PLSPPPRSTIAAAFSPDGKTLASTHGD----HTVKII 134 (768)
Q Consensus 73 l~~a~~d--~g~~LvSgs~DgsIrlWd~~t~------------~L~gH~~~VtslafSPDG~~LaSgS~D----gtVrVW 134 (768)
...+... ++..|++++.|+.|++||..++ .+..|...|.+++|+||+++|++++.| +.|++|
T Consensus 68 ~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~ 147 (615)
T 1pgu_A 68 TTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISW 147 (615)
T ss_dssp EEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEET
T ss_pred EEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEE
Confidence 3444556 7889999999999999999632 466899999999999999999999988 788888
Q ss_pred eCCCCeEEEEEecCCCCcEEEEEccCCCC-EEEEEeCCCeEEEEECCCCcEEEEec-CCC---CeEEEEEcCC-CCEEEE
Q 004203 135 DCQTGSCLKVLHGHRRTPWVVRFHPLNPT-IIASGSLDHEVRLWNASTAECIGSRD-FYR---PIASIAFHAS-GELLAV 208 (768)
Q Consensus 135 Dl~tg~~l~~l~gH~g~V~sVafSP~dg~-lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~---~V~svafSPD-G~~Lat 208 (768)
| +++.+..+.+|...|.+++|+| ++. ++++++.|+.|++||+.+++.+..+. |.. .|.+++|+|+ +++|++
T Consensus 148 d--~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 224 (615)
T 1pgu_A 148 D--SGNSLGEVSGHSQRINACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT 224 (615)
T ss_dssp T--TCCEEEECCSCSSCEEEEEECS-SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEE
T ss_pred E--CCCcceeeecCCccEEEEEECC-CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEE
Confidence 8 6778899999999999999999 665 89999999999999999999888875 777 8999999999 999999
Q ss_pred EECC-eEEEEEcCCCccccCCeEe-e---cCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEe
Q 004203 209 ASGH-KLYIWRYNMREETSSPRIV-L---RTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLA 269 (768)
Q Consensus 209 gSdd-~I~IWDl~t~~~~~~~~~l-~---~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg~~~~~L~ 269 (768)
++.+ .|++||+++++... .+ . .|...|.++.|+ +++++++++. +|+++.++....+.
T Consensus 225 ~~~dg~i~vwd~~~~~~~~---~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 225 VGSDRKISCFDGKSGEFLK---YIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp EETTCCEEEEETTTCCEEE---ECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EeCCCeEEEEECCCCCEeE---EecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 9954 59999998887543 33 3 789999999999 9998887764 77877654444433
No 111
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.81 E-value=2.8e-18 Score=188.39 Aligned_cols=171 Identities=19% Similarity=0.213 Sum_probs=152.4
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcE
Q 004203 78 RDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (768)
Q Consensus 78 ~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~ 153 (768)
...+..+++++.|+.|++||+.+. .+.+|...|.+++|+|++++|++++.|+.|++||+++++++..+.+|...|.
T Consensus 277 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~ 356 (464)
T 3v7d_B 277 SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVG 356 (464)
T ss_dssp EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEE
Confidence 346788999999999999999876 4778999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEeec
Q 004203 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLR 233 (768)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSdd~I~IWDl~t~~~~~~~~~l~~ 233 (768)
++.|++ +++++++.|++|++||+++++......+...+..++|++++++|++++++.|++||+.+++... .....
T Consensus 357 ~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~--~~~~~ 431 (464)
T 3v7d_B 357 LLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVH--ANILK 431 (464)
T ss_dssp EEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEE--SCTTT
T ss_pred EEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEe--hhhcc
Confidence 999964 8999999999999999999988888888888999999999999999998889999999987643 12456
Q ss_pred CCCCeEEEEEccCCCeEEEEEe
Q 004203 234 TRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 234 h~~~V~sVaFSPDG~~LlaS~s 255 (768)
|...|.+++|+ ++.+++++.
T Consensus 432 ~~~~v~~v~~~--~~~l~~~~~ 451 (464)
T 3v7d_B 432 DADQIWSVNFK--GKTLVAAVE 451 (464)
T ss_dssp TCSEEEEEEEE--TTEEEEEEE
T ss_pred CCCcEEEEEec--CCEEEEEEE
Confidence 78899999997 566666665
No 112
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.80 E-value=2.4e-18 Score=176.36 Aligned_cols=167 Identities=13% Similarity=0.162 Sum_probs=143.4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC--CCCCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEec-CCCCcEEE
Q 004203 80 ARRGLASWVEAESLHHLRPKYC--PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVLHG-HRRTPWVV 155 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~--~L~gH~~~VtslafSP-DG~~LaSgS~DgtVrVWDl~tg~~l~~l~g-H~g~V~sV 155 (768)
.+..+++++.|+.|++||.... .+..|...|.++.|+| ++++|++++.|+.|++|| .++....+.. |...+.++
T Consensus 113 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~ 190 (313)
T 3odt_A 113 QDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHL 190 (313)
T ss_dssp ETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEE
T ss_pred cCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEE
Confidence 4678999999999999994332 4678999999999999 999999999999999999 5667777877 89999999
Q ss_pred EEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEeec
Q 004203 156 RFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLR 233 (768)
Q Consensus 156 afSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l~~ 233 (768)
+|+| ++. +++++.|+.|++||+++++.+..+. |...|.+++|+|++. |++++ ++.|++||+++++... .+..
T Consensus 191 ~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~---~~~~ 264 (313)
T 3odt_A 191 AVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGD-IVSCGEDRTVRIWSKENGSLKQ---VITL 264 (313)
T ss_dssp EEEE-TTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSC-EEEEETTSEEEEECTTTCCEEE---EEEC
T ss_pred EEcC-CCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCC-EEEEecCCEEEEEECCCCceeE---EEec
Confidence 9999 776 9999999999999999999888765 889999999999995 66666 5569999999887544 5667
Q ss_pred CCCCeEEEEEccCCCeEEEEEe
Q 004203 234 TRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 234 h~~~V~sVaFSPDG~~LlaS~s 255 (768)
|...|.+++|+|+++ +++++.
T Consensus 265 ~~~~i~~~~~~~~~~-~~~~~~ 285 (313)
T 3odt_A 265 PAISIWSVDCMSNGD-IIVGSS 285 (313)
T ss_dssp SSSCEEEEEECTTSC-EEEEET
T ss_pred cCceEEEEEEccCCC-EEEEeC
Confidence 888999999999998 555443
No 113
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.80 E-value=1.2e-17 Score=178.49 Aligned_cols=166 Identities=13% Similarity=0.222 Sum_probs=136.5
Q ss_pred CEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEE
Q 004203 82 RGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVR 156 (768)
Q Consensus 82 ~~LvSgs~DgsIrlWd~~t~~----L~gH~~~VtslafSPDG~~L-aSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVa 156 (768)
..+++++.|+.|++||..+++ +..| ..+.+++|+|||++| ++++.|++|++||+++++.+..+..+. .+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 457788899999999998773 3344 459999999999987 567789999999999999998888665 799999
Q ss_pred EccCCCCEE-EEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEE-EEE-CCeEEEEEcCCCccccCCeEeec
Q 004203 157 FHPLNPTII-ASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLA-VAS-GHKLYIWRYNMREETSSPRIVLR 233 (768)
Q Consensus 157 fSP~dg~lL-aSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~La-tgS-dd~I~IWDl~t~~~~~~~~~l~~ 233 (768)
|+| +++++ ++++.|+.|++||+.+++.+..+.+...+.+++|+|++++|+ +++ ++.|++||+.+++... ...
T Consensus 81 ~sp-dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~----~~~ 155 (391)
T 1l0q_A 81 VSP-DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN----TVS 155 (391)
T ss_dssp ECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE----EEE
T ss_pred ECC-CCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE----EEe
Confidence 999 77766 455677999999999999988888888899999999999884 554 4559999998876533 333
Q ss_pred CCCCeEEEEEccCCCeEEEEE
Q 004203 234 TRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 234 h~~~V~sVaFSPDG~~LlaS~ 254 (768)
....+..++|+|+|+++++++
T Consensus 156 ~~~~~~~~~~~~dg~~l~~~~ 176 (391)
T 1l0q_A 156 VGRSPKGIAVTPDGTKVYVAN 176 (391)
T ss_dssp CCSSEEEEEECTTSSEEEEEE
T ss_pred cCCCcceEEECCCCCEEEEEe
Confidence 446789999999999886654
No 114
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.7e-18 Score=210.24 Aligned_cols=161 Identities=8% Similarity=0.075 Sum_probs=134.2
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCCCC---------------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC----
Q 004203 79 DARRGLASWVEAESLHHLRPKYCPLS---------------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG---- 139 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~~L~---------------gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg---- 139 (768)
.++..|++++.|++|++||+.++.+. +|...|++++|+|||++||+|+.|++|+|||+.++
T Consensus 445 pdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~ 524 (902)
T 2oaj_A 445 EYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYS 524 (902)
T ss_dssp SEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--
T ss_pred ccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccC
Confidence 35678999999999999999876432 78999999999999999999999999999999876
Q ss_pred -----------------------------------------eEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEE
Q 004203 140 -----------------------------------------SCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWN 178 (768)
Q Consensus 140 -----------------------------------------~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWD 178 (768)
+++..+.+|.+.|++++|+| +| +||+|+.|++|+|||
T Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp-dG-~lAsgs~D~tv~lwd 602 (902)
T 2oaj_A 525 VENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN-IG-FVGIAYAAGSLMLID 602 (902)
T ss_dssp -------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB-TS-EEEEEETTSEEEEEE
T ss_pred ccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC-Cc-EEEEEeCCCcEEEEE
Confidence 24678889999999999999 88 999999999999999
Q ss_pred CCCCcEEEE-----e--cCCCCeEEEEEc-----CCC---CEEEEEECCe-EEEEEc---CCCccccCCeEeec-----C
Q 004203 179 ASTAECIGS-----R--DFYRPIASIAFH-----ASG---ELLAVASGHK-LYIWRY---NMREETSSPRIVLR-----T 234 (768)
Q Consensus 179 l~sg~~i~~-----l--~h~~~V~svafS-----PDG---~~LatgSdd~-I~IWDl---~t~~~~~~~~~l~~-----h 234 (768)
++++..+.. + +|...|++++|+ ||| ++|++++.|+ |++||+ .+++... .+.+ +
T Consensus 603 ~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~---~~~~~~~~~~ 679 (902)
T 2oaj_A 603 RRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDV---QLMDITNVTS 679 (902)
T ss_dssp TTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEE---EEEEEEECCS
T ss_pred CCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEE---EecCceecCC
Confidence 988876542 2 578889999999 886 7999999654 999999 5554322 2333 3
Q ss_pred CCCeEEEE-Ec
Q 004203 235 RRSLRAVH-FH 244 (768)
Q Consensus 235 ~~~V~sVa-FS 244 (768)
...|..+. |+
T Consensus 680 ~~~v~~i~~~~ 690 (902)
T 2oaj_A 680 KGPIHKIDAFS 690 (902)
T ss_dssp SCCCCEEEEEE
T ss_pred CCceEEEEeEe
Confidence 56777776 76
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.80 E-value=7.9e-18 Score=182.38 Aligned_cols=171 Identities=12% Similarity=0.124 Sum_probs=145.7
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCC---------CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCC
Q 004203 79 DARRGLASWVEAESLHHLRPKYCP---------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR 149 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~~---------L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~ 149 (768)
.++..++++..++.|++||..+++ +.+|...|.+++|+++++++++++.|+.|++||+++++.+..+..|.
T Consensus 132 ~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~ 211 (433)
T 3bws_A 132 DNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG 211 (433)
T ss_dssp SSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS
T ss_pred CCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC
Confidence 355667777788899999998762 33788999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEccCCCCEE-EEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE---------CCeEEEEEc
Q 004203 150 RTPWVVRFHPLNPTII-ASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS---------GHKLYIWRY 219 (768)
Q Consensus 150 g~V~sVafSP~dg~lL-aSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgS---------dd~I~IWDl 219 (768)
..+.+++|+| +++.+ ++++.|+.|++||+++++.+..+.....+.+++|+|+|++|++++ ++.|++||+
T Consensus 212 ~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~ 290 (433)
T 3bws_A 212 KWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSM 290 (433)
T ss_dssp SSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEET
T ss_pred CCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEEC
Confidence 9999999999 77766 555589999999999999988888777899999999999998887 345999999
Q ss_pred CCCccccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 220 NMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 220 ~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
++++... ...+...+..++|+|+++++++++
T Consensus 291 ~~~~~~~----~~~~~~~~~~~~~~~~g~~l~~~~ 321 (433)
T 3bws_A 291 DKEKLID----TIGPPGNKRHIVSGNTENKIYVSD 321 (433)
T ss_dssp TTTEEEE----EEEEEECEEEEEECSSTTEEEEEE
T ss_pred CCCcEEe----eccCCCCcceEEECCCCCEEEEEe
Confidence 8876533 344556899999999999777765
No 116
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.79 E-value=2.7e-17 Score=169.31 Aligned_cols=180 Identities=20% Similarity=0.320 Sum_probs=149.8
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCC---------------------------------------------CCCCCC
Q 004203 73 IFEAGRDARRGLASWVEAESLHHLRPKYC---------------------------------------------PLSPPP 107 (768)
Q Consensus 73 l~~a~~d~g~~LvSgs~DgsIrlWd~~t~---------------------------------------------~L~gH~ 107 (768)
...+...++..|++++.|+.|++|+..++ .+.+|.
T Consensus 71 ~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (318)
T 4ggc_A 71 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS 150 (318)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS
T ss_pred EEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCcc
Confidence 34556667788888888888888887643 134688
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe----EEEEEecCCCCcEEEEEccCCCCEEE--EEeCCCeEEEEECCC
Q 004203 108 RSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS----CLKVLHGHRRTPWVVRFHPLNPTIIA--SGSLDHEVRLWNAST 181 (768)
Q Consensus 108 ~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~----~l~~l~gH~g~V~sVafSP~dg~lLa--SgS~DgtVrLWDl~s 181 (768)
..+..+.|++++++|++++.|++|++||+++++ .......|.+.|..+.++|.+..++. +++.+++|++||.+.
T Consensus 151 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~ 230 (318)
T 4ggc_A 151 QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS 230 (318)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT
T ss_pred CceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc
Confidence 899999999999999999999999999998865 34566778889999999996666554 567789999999999
Q ss_pred CcEEEEecCCCCeEEEEEcCCCCEEEEEE---CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 182 AECIGSRDFYRPIASIAFHASGELLAVAS---GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 182 g~~i~~l~h~~~V~svafSPDG~~LatgS---dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
........+...+..+.|+|+++.+++++ ++.|++||+++++... .+.+|...|++++|+|||++|++++.
T Consensus 231 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~---~l~gH~~~V~~l~~spdg~~l~S~s~ 304 (318)
T 4ggc_A 231 GACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA---ELKGHTSRVLSLTMSPDGATVASAAA 304 (318)
T ss_dssp CCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSSCEEEEET
T ss_pred ccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEE---EEcCCCCCEEEEEEcCCCCEEEEEec
Confidence 99988888999999999999999888776 3459999999887644 67789999999999999998887764
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.79 E-value=2.3e-18 Score=204.27 Aligned_cols=181 Identities=13% Similarity=0.154 Sum_probs=151.6
Q ss_pred CCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCEEEEEeCCCeEEEEeCCCC--eEEEEEecCCC
Q 004203 81 RRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTG--SCLKVLHGHRR 150 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~------~L~gH~~~VtslafSPD--G~~LaSgS~DgtVrVWDl~tg--~~l~~l~gH~g 150 (768)
+..|++++.|+.|++||..++ .+.+|...|++++|+|+ +++|++++.|+.|++||++++ .....+.+|..
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~ 146 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 146 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC
Confidence 789999999999999999876 36689999999999999 999999999999999999887 34566788999
Q ss_pred CcEEEEEccC------------CCCEEEEEeCCCeEEEEECCCCc----EEEEe-cCCCCeEEEEEcCC---CCEEEEEE
Q 004203 151 TPWVVRFHPL------------NPTIIASGSLDHEVRLWNASTAE----CIGSR-DFYRPIASIAFHAS---GELLAVAS 210 (768)
Q Consensus 151 ~V~sVafSP~------------dg~lLaSgS~DgtVrLWDl~sg~----~i~~l-~h~~~V~svafSPD---G~~LatgS 210 (768)
.|.++.|+|. ++.++++++.||+|++||++++. ....+ .|...|.+++|+|+ +++|++++
T Consensus 147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 9999999994 48899999999999999998873 33333 48899999999999 89999999
Q ss_pred CC-eEEEEEcCCCcccc--CCeEeecCCCCeEEEEEccCCCeEEEEEe-----eCCcCC
Q 004203 211 GH-KLYIWRYNMREETS--SPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDS 261 (768)
Q Consensus 211 dd-~I~IWDl~t~~~~~--~~~~l~~h~~~V~sVaFSPDG~~LlaS~s-----vwdl~s 261 (768)
.+ .|++||++++.... .......|...|.+++|+|+|+++++++. +|++..
T Consensus 227 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred cCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 55 49999998864221 11223447889999999999998888765 677663
No 118
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.79 E-value=3e-18 Score=207.97 Aligned_cols=183 Identities=13% Similarity=0.082 Sum_probs=151.5
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCC
Q 004203 73 IFEAGRDARRGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR 149 (768)
Q Consensus 73 l~~a~~d~g~~LvSgs~DgsIrlWd~~t~~---L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~ 149 (768)
...+...++..|++++.|+.|++|+....+ ...|...|.+++|+| |++|++++.|++|++||+++++++..+. |.
T Consensus 21 ~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~ 98 (902)
T 2oaj_A 21 IAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VP 98 (902)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CS
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CC
Confidence 345556788999999999999999987653 235888999999999 8899999999999999999999988886 66
Q ss_pred CCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEE-----------E-ecCCCCeEEEEEcCC-CCEEEEEECCe-EE
Q 004203 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIG-----------S-RDFYRPIASIAFHAS-GELLAVASGHK-LY 215 (768)
Q Consensus 150 g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~-----------~-l~h~~~V~svafSPD-G~~LatgSdd~-I~ 215 (768)
+.|++++|+| +++++++|+.||+|++||++++++.. . ..|.+.|.+++|+|+ +..|+++++++ |
T Consensus 99 ~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v- 176 (902)
T 2oaj_A 99 GKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL- 176 (902)
T ss_dssp SCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-
T ss_pred CCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-
Confidence 8899999999 99999999999999999999987641 1 237789999999996 46788887655 8
Q ss_pred EEEcCCCccccCCeEeec------------------CCCCeEEEEEccCCCeEEEEEe-----eCCcCCC
Q 004203 216 IWRYNMREETSSPRIVLR------------------TRRSLRAVHFHPHAAPLLLTAE-----VNDLDSS 262 (768)
Q Consensus 216 IWDl~t~~~~~~~~~l~~------------------h~~~V~sVaFSPDG~~LlaS~s-----vwdl~sg 262 (768)
+||+++.+... .+.. |...|++++|+|||++|++++. +||++.+
T Consensus 177 lWd~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 177 TYSLVENEIKQ---SFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp EEETTTTEEEE---EECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred EEECCCCceEE---EEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 99999876533 2222 3577999999999998887765 6777654
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.78 E-value=1.1e-18 Score=190.41 Aligned_cols=173 Identities=14% Similarity=0.098 Sum_probs=125.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeCCCCeEEEE----------
Q 004203 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDG-KTLASTHGDHTVKIIDCQTGSCLKV---------- 144 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG-~~LaSgS~DgtVrVWDl~tg~~l~~---------- 144 (768)
++..|++++.|++|++||+... .+.+|...|.+++|+|++ .+|++++.|++|++||+++++....
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 5678999999999999998765 466899999999999987 4899999999999999988764332
Q ss_pred ---------------EecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCC---------------
Q 004203 145 ---------------LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRP--------------- 193 (768)
Q Consensus 145 ---------------l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~--------------- 193 (768)
..+|...+.++.|++.+++.+++++.|+++++||+.+++....+. +...
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 314 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL 314 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECS
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc
Confidence 246778899999984499999999999999999998876544321 2111
Q ss_pred ---eEEEEEcC-CCC-EEEEEE-CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 194 ---IASIAFHA-SGE-LLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 194 ---V~svafSP-DG~-~LatgS-dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
.....|+| .+. ++++++ ++.|++||+.+++... ....|...|++++|||||++|++++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~---~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 315 FPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS---IPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp SCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE---EEEECSSCEEEEEECTTSSEEEEEES
T ss_pred cCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE---EecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 22234444 233 556666 4559999999887533 56778899999999999998877653
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.78 E-value=2.3e-17 Score=177.43 Aligned_cols=182 Identities=8% Similarity=0.018 Sum_probs=139.0
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCC--CCCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEeCCCCeEEEEEecCCCC
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYCP--LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~~--L~gH~~~VtslafSPDG~~L-aSgS~DgtVrVWDl~tg~~l~~l~gH~g~ 151 (768)
.+...++..|++++.+ .+++|+....+ +..+...+..++|.++++.+ ++++.|++|++||+.+++++..+. +...
T Consensus 25 v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~ 102 (355)
T 3vu4_A 25 YEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAP 102 (355)
T ss_dssp EEECTTSSEEEEECSS-EEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSC
T ss_pred EEECCCCCEEEEEcCC-EEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCc
Confidence 3344677788888766 47899987653 22233358889999988887 467788999999999999998887 5668
Q ss_pred cEEEEEccCCC-----------------------------------CEEEE--EeCCCeEEEEECCCCc-----------
Q 004203 152 PWVVRFHPLNP-----------------------------------TIIAS--GSLDHEVRLWNASTAE----------- 183 (768)
Q Consensus 152 V~sVafSP~dg-----------------------------------~lLaS--gS~DgtVrLWDl~sg~----------- 183 (768)
|.++.|++ +. .++++ |+.||.|++||+++++
T Consensus 103 v~~v~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~ 181 (355)
T 3vu4_A 103 VKDLFLSR-EFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQ 181 (355)
T ss_dssp EEEEEECS-SEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-------------
T ss_pred eEEEEEcC-CEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccc
Confidence 99998887 32 23343 5788899999998765
Q ss_pred ------EEEEecCCCCeEEEEEcCCCCEEEEEE-CCe-EEEEEcCCCccccCCeEee-c-CCCCeEEEEEccCCCeEEEE
Q 004203 184 ------CIGSRDFYRPIASIAFHASGELLAVAS-GHK-LYIWRYNMREETSSPRIVL-R-TRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 184 ------~i~~l~h~~~V~svafSPDG~~LatgS-dd~-I~IWDl~t~~~~~~~~~l~-~-h~~~V~sVaFSPDG~~LlaS 253 (768)
......|...|.+++|+|+|++|++++ |+. |++||+++++... .+. + |...|.+++|+|||++|+++
T Consensus 182 ~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~---~~~~g~h~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 182 KAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVR---EFRRGLDRADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp -----CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEE---EEECTTCCSCEEEEEECTTSCEEEEE
T ss_pred cccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE---EEEcCCCCCcEEEEEECCCCCEEEEE
Confidence 223346899999999999999999999 555 9999999887644 444 4 89999999999999988877
Q ss_pred Ee-----eCCcCCC
Q 004203 254 AE-----VNDLDSS 262 (768)
Q Consensus 254 ~s-----vwdl~sg 262 (768)
+. +|++...
T Consensus 259 s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 259 SDKWTLHVFEIFND 272 (355)
T ss_dssp ETTCEEEEEESSCC
T ss_pred ECCCEEEEEEccCC
Confidence 65 7777643
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.78 E-value=9.7e-17 Score=171.42 Aligned_cols=174 Identities=16% Similarity=0.211 Sum_probs=140.4
Q ss_pred EEEecCCCEE-EEEeCCCeEEEEeCCCCCC---CCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEeCCCCeEEEEEecCC
Q 004203 75 EAGRDARRGL-ASWVEAESLHHLRPKYCPL---SPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHR 149 (768)
Q Consensus 75 ~a~~d~g~~L-vSgs~DgsIrlWd~~t~~L---~gH~~~VtslafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~ 149 (768)
.+...++..+ ++++.|+.|++||..++++ ..+...+.+++|+||+++|+.+ +.|+.|++||+++++.+..+..+.
T Consensus 37 ~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~ 116 (391)
T 1l0q_A 37 AVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK 116 (391)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred EEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC
Confidence 3444556655 6777999999999987732 1233499999999999988655 467999999999999988887654
Q ss_pred CCcEEEEEccCCCCEE-EEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE-C-CeEEEEEcCCCcccc
Q 004203 150 RTPWVVRFHPLNPTII-ASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS-G-HKLYIWRYNMREETS 226 (768)
Q Consensus 150 g~V~sVafSP~dg~lL-aSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgS-d-d~I~IWDl~t~~~~~ 226 (768)
.+.+++|+| +++.+ ++++.|+.|++||+.+++.+..+.....+..++|+|++++|++++ . +.|++||+++++...
T Consensus 117 -~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 117 -SPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp -SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -CcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 589999999 77765 788889999999999999988888778889999999999885544 3 459999998876533
Q ss_pred CCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 227 SPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 227 ~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
...+...+.+++|+|+|+++++++
T Consensus 195 ----~~~~~~~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 195 ----TVKVEAAPSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp ----EEECSSEEEEEEECTTSSEEEEEE
T ss_pred ----EEecCCCccceEECCCCCEEEEEe
Confidence 344667899999999999888776
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.78 E-value=4.5e-17 Score=176.46 Aligned_cols=227 Identities=8% Similarity=0.063 Sum_probs=170.4
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCCCCeEEEEEecCCCCc
Q 004203 78 RDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQTGSCLKVLHGHRRTP 152 (768)
Q Consensus 78 ~d~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS-~DgtVrVWDl~tg~~l~~l~gH~g~V 152 (768)
..++..+++++.|+.|++||..+. ++..|...+.+++|+|+++++++++ .|+.|++||+++++.+..+..+ ..+
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~ 256 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLP 256 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEE
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCc
Confidence 456778899999999999999876 3557899999999999999886554 7999999999999988888765 458
Q ss_pred EEEEEccCCCCEEEEEe--------CCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEE-E-CCeEEEEEcCCC
Q 004203 153 WVVRFHPLNPTIIASGS--------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVA-S-GHKLYIWRYNMR 222 (768)
Q Consensus 153 ~sVafSP~dg~lLaSgS--------~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~Latg-S-dd~I~IWDl~t~ 222 (768)
..++|+| +++.+++++ .|+.|++||+++++.+..+.+...+..++|+|+++.|++. + ++.|++||+.++
T Consensus 257 ~~~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 257 RGLLLSK-DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp EEEEECT-TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT
T ss_pred eEEEEcC-CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC
Confidence 9999999 888888887 5889999999999988888777889999999999876555 4 455999999977
Q ss_pred ccccCCeEeecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCCC
Q 004203 223 EETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLI 302 (768)
Q Consensus 223 ~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~ 302 (768)
+... ...+...+.+++|+|+|++++++....+.... . .+ ..|. ....+.+|+..+.........
T Consensus 336 ~~~~----~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~--~-~~--~~g~---~dg~v~~~d~~~~~~~~~~~~---- 399 (433)
T 3bws_A 336 KVQK----SIPVFDKPNTIALSPDGKYLYVSCRGPNHPTE--G-YL--KKGL---VLGKVYVIDTTTDTVKEFWEA---- 399 (433)
T ss_dssp EEEE----EEECSSSEEEEEECTTSSEEEEEECCCCCTTT--C-TT--SCCS---SCCEEEEEETTTTEEEEEEEC----
T ss_pred cEEE----EecCCCCCCeEEEcCCCCEEEEEecCCCcccc--c-cc--cccc---cceEEEEEECCCCcEEEEecC----
Confidence 6433 34467889999999999988777653221100 0 00 0010 123567777555433322221
Q ss_pred CCCceEEEEecCCCEEEEEe
Q 004203 303 TPPFLRPSFVRDDERISLQH 322 (768)
Q Consensus 303 slpil~psFSpDG~rIv~~~ 322 (768)
.......+|+|||+.|++..
T Consensus 400 ~~~~~~~~~s~dg~~l~~~~ 419 (433)
T 3bws_A 400 GNQPTGLDVSPDNRYLVISD 419 (433)
T ss_dssp SSSEEEEEECTTSCEEEEEE
T ss_pred CCCCceEEEcCCCCEEEEEE
Confidence 22356789999999998753
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.78 E-value=9.1e-18 Score=193.22 Aligned_cols=162 Identities=15% Similarity=0.155 Sum_probs=125.0
Q ss_pred EEEeCCCeEEEEeCCCC----CCC-CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCC-----CcEE
Q 004203 85 ASWVEAESLHHLRPKYC----PLS-PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR-----TPWV 154 (768)
Q Consensus 85 vSgs~DgsIrlWd~~t~----~L~-gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g-----~V~s 154 (768)
+.-+.||.++.|+..+. .+. .|...|.+++|||||++||+++.||.|++||.++ ++..+. |.. .|.+
T Consensus 58 V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~s 134 (588)
T 2j04_A 58 VKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHC 134 (588)
T ss_dssp EEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEE
T ss_pred EEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEE
Confidence 44455555555666543 233 6788999999999999999999999999999654 667777 665 4999
Q ss_pred EEEccCCCCEEEEEeCCCeEEEEECCCCcE-------EEEe-----cCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCC
Q 004203 155 VRFHPLNPTIIASGSLDHEVRLWNASTAEC-------IGSR-----DFYRPIASIAFHASGELLAVAS-GHKLYIWRYNM 221 (768)
Q Consensus 155 VafSP~dg~lLaSgS~DgtVrLWDl~sg~~-------i~~l-----~h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t 221 (768)
++||| |+++|++|+.||+|+|||+.+++. +.++ +|...|.+++|+||| |++++ |+.|++||+..
T Consensus 135 vafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~ 211 (588)
T 2j04_A 135 FEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSA 211 (588)
T ss_dssp EEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCS
T ss_pred EEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCC
Confidence 99999 999999999999999999998853 4443 366799999999999 55555 56699999988
Q ss_pred CccccCCeEe-ecCCCCeEEEEEccCCCeEEEEE
Q 004203 222 REETSSPRIV-LRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 222 ~~~~~~~~~l-~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
.........+ ..|...|.+++|+ |+.+++++
T Consensus 212 ~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~ 243 (588)
T 2j04_A 212 SSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC 243 (588)
T ss_dssp SSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC
T ss_pred CccccceeeecccccCcEEEEEEE--CCEEEEEe
Confidence 7632111233 3678899999999 56666654
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.77 E-value=6.1e-18 Score=184.28 Aligned_cols=161 Identities=13% Similarity=0.073 Sum_probs=124.7
Q ss_pred CCCeEEEEeCCC-C----CCCCCCCCeEEEEECC---CCCEEEEEeCCCeEEEEeCCCCeEEEEEecCC---CCcEEEEE
Q 004203 89 EAESLHHLRPKY-C----PLSPPPRSTIAAAFSP---DGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR---RTPWVVRF 157 (768)
Q Consensus 89 ~DgsIrlWd~~t-~----~L~gH~~~VtslafSP---DG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~---g~V~sVaf 157 (768)
.|+.|++|++.. + .+.+|...++.++|++ |+.+|++++.|++|+|||+++|+++++|.+|. ..+.+++|
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 499999999944 4 3457888999999999 77999999999999999999999999998754 35777899
Q ss_pred ccCCCCEE------------EEEeCCCeEEEEECCCCcEEEEe------cCCCCeEEEEEcCCCCEEEEEEC-CeEEEEE
Q 004203 158 HPLNPTII------------ASGSLDHEVRLWNASTAECIGSR------DFYRPIASIAFHASGELLAVASG-HKLYIWR 218 (768)
Q Consensus 158 SP~dg~lL------------aSgS~DgtVrLWDl~sg~~i~~l------~h~~~V~svafSPDG~~LatgSd-d~I~IWD 218 (768)
+| ++.++ ++|+.|++|++||..+++.+..+ +|...+.+..+ ++.++++++. ++|+|||
T Consensus 235 Sp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWD 311 (356)
T 2w18_A 235 SE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWD 311 (356)
T ss_dssp EE-TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEE
T ss_pred CC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEE
Confidence 99 88776 66889999999999999987664 34444444444 4888999984 5599999
Q ss_pred cCCCccccCCeEeecCCCCeE-EEEEccCCCeEEEEEe
Q 004203 219 YNMREETSSPRIVLRTRRSLR-AVHFHPHAAPLLLTAE 255 (768)
Q Consensus 219 l~t~~~~~~~~~l~~h~~~V~-sVaFSPDG~~LlaS~s 255 (768)
+.+++... .+.+|...+. .++|||||++|++++.
T Consensus 312 l~tGk~l~---tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 312 LLLGQCTA---LLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TTTCSEEE---EECCC--CCCCEEEECSSSSEEEEECT
T ss_pred CCCCcEEE---EecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 99998654 5666766554 6899999998777654
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.75 E-value=2.8e-17 Score=176.73 Aligned_cols=169 Identities=11% Similarity=0.077 Sum_probs=126.6
Q ss_pred EEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCC-----------------------------------CEEEE--
Q 004203 85 ASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDG-----------------------------------KTLAS-- 124 (768)
Q Consensus 85 vSgs~DgsIrlWd~~t~~---L~gH~~~VtslafSPDG-----------------------------------~~LaS-- 124 (768)
++++.|+.|++||..+++ ...|...|.+++|+++. .++++
T Consensus 75 ~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~s 154 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSN 154 (355)
T ss_dssp EECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEE
T ss_pred EEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeC
Confidence 456666777777776552 11255567777776542 34444
Q ss_pred EeCCCeEEEEeCCCCe----------------EEEEEecCCCCcEEEEEccCCCCEEEEEeCCCe-EEEEECCCCcEEEE
Q 004203 125 THGDHTVKIIDCQTGS----------------CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHE-VRLWNASTAECIGS 187 (768)
Q Consensus 125 gS~DgtVrVWDl~tg~----------------~l~~l~gH~g~V~sVafSP~dg~lLaSgS~Dgt-VrLWDl~sg~~i~~ 187 (768)
++.||.|++||+++++ ++..+.+|.+.|.+++|+| ++++|++++.|++ |+|||+++++++..
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 4779999999998865 2688899999999999999 9999999999998 99999999999988
Q ss_pred ec---CCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCeEe---------------------ecCCCCeEEEE
Q 004203 188 RD---FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIV---------------------LRTRRSLRAVH 242 (768)
Q Consensus 188 l~---h~~~V~svafSPDG~~LatgSdd~-I~IWDl~t~~~~~~~~~l---------------------~~h~~~V~sVa 242 (768)
+. |...|.+++|+|+|++|++++.++ |++||++...... ...+ .........++
T Consensus 234 ~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 312 (355)
T 3vu4_A 234 FRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNK-RHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIA 312 (355)
T ss_dssp EECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCC-SEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEE
T ss_pred EEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcc-cccccceeeccccccccceeEEEeccCCCCCceEEE
Confidence 75 889999999999999999999654 9999997654211 0000 00112346789
Q ss_pred EccCCCeEEEEEe
Q 004203 243 FHPHAAPLLLTAE 255 (768)
Q Consensus 243 FSPDG~~LlaS~s 255 (768)
|++||+++++.+.
T Consensus 313 ~~~d~~~l~~~~~ 325 (355)
T 3vu4_A 313 WISESSLVVVWPH 325 (355)
T ss_dssp ESSSSEEEEEETT
T ss_pred EeCCCCEEEEEeC
Confidence 9999997777653
No 126
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.74 E-value=7.8e-17 Score=176.78 Aligned_cols=167 Identities=17% Similarity=0.326 Sum_probs=142.1
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCc
Q 004203 80 ARRGLASWVEAESLHHLRPKYC-------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTP 152 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~-------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V 152 (768)
.+..+++++.|+.|++||..+. .+.+|...|.+++| ++++|++++.|+.|++||+++++.+..+.+|...|
T Consensus 222 ~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v 299 (435)
T 1p22_A 222 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI 299 (435)
T ss_dssp CTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred cCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcE
Confidence 3568899999999999998765 25689999999999 78999999999999999999999999999999999
Q ss_pred EEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCcccc----
Q 004203 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETS---- 226 (768)
Q Consensus 153 ~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~~---- 226 (768)
.++.|+ ++++++|+.|++|++||+++++++..+. |...|.+++| ++++|++++.+ .|++||+.+.....
T Consensus 300 ~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 374 (435)
T 1p22_A 300 ACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAG 374 (435)
T ss_dssp EEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTT
T ss_pred EEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcccccc
Confidence 999984 5899999999999999999999988875 8889999999 78899999955 59999997654210
Q ss_pred --CCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 227 --SPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 227 --~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
....+..|...|.+++| +++++++++.
T Consensus 375 ~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~ 403 (435)
T 1p22_A 375 TLCLRTLVEHSGRVFRLQF--DEFQIVSSSH 403 (435)
T ss_dssp TTEEEEECCCSSCCCCEEE--CSSCEEECCS
T ss_pred chheeeccCCCCCeEEEEe--CCCEEEEEeC
Confidence 12345678899999999 7777776653
No 127
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=3.2e-16 Score=157.79 Aligned_cols=164 Identities=12% Similarity=0.063 Sum_probs=126.5
Q ss_pred EeCCCeEEEEeCCCC---CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-CeEEEEEecCC-CCcEEEEEccCC
Q 004203 87 WVEAESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT-GSCLKVLHGHR-RTPWVVRFHPLN 161 (768)
Q Consensus 87 gs~DgsIrlWd~~t~---~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~t-g~~l~~l~gH~-g~V~sVafSP~d 161 (768)
.+.++.|++||..++ .+..|...|.+++|+|||++|++++ ++.|++||+++ ++....+.++. ..+.+++|+| +
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-d 95 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP-D 95 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT-T
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC-C
Confidence 356889999999877 3567899999999999999999987 78999999999 88777776663 6788999999 9
Q ss_pred CCEEEEEeC--C--CeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEE-EE-CCeEEEEEcCCCccccCCeEeecCC
Q 004203 162 PTIIASGSL--D--HEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAV-AS-GHKLYIWRYNMREETSSPRIVLRTR 235 (768)
Q Consensus 162 g~lLaSgS~--D--gtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~Lat-gS-dd~I~IWDl~t~~~~~~~~~l~~h~ 235 (768)
+++|++++. + ..|++||+.+++. ..+.....+..++|+||+++|++ +. ++.+++|+++.... ....+..+.
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~ 172 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG--VETRLTHGE 172 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCCC-EECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC--CEEECCCSS
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCce-EEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCC--cceEcccCC
Confidence 999999883 3 3555566666653 34444455899999999998874 44 56688888754322 123455677
Q ss_pred CCeEEEEEccCCCeEEEEEe
Q 004203 236 RSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 236 ~~V~sVaFSPDG~~LlaS~s 255 (768)
..+.++.|+|+|+++++++.
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSS 192 (297)
T ss_dssp SCEEEEEECTTSSEEEEEEC
T ss_pred CccccceECCCCCEEEEEec
Confidence 88999999999998887764
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.73 E-value=5.1e-16 Score=171.24 Aligned_cols=173 Identities=16% Similarity=0.103 Sum_probs=140.2
Q ss_pred EEecCCCEEEEEeCCC---eEEEEeCCCC---CCCCCCCCeEEEEECCCCCEEE-EEeCCC--eEEEEeCCCCeEEEEEe
Q 004203 76 AGRDARRGLASWVEAE---SLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLA-STHGDH--TVKIIDCQTGSCLKVLH 146 (768)
Q Consensus 76 a~~d~g~~LvSgs~Dg---sIrlWd~~t~---~L~gH~~~VtslafSPDG~~La-SgS~Dg--tVrVWDl~tg~~l~~l~ 146 (768)
+...+++.|+.++.++ .|++||+.++ .+..|...+.+++|+|||++|+ +++.|+ .|++||+++++. ..+.
T Consensus 185 ~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~ 263 (415)
T 2hqs_A 185 AWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVT 263 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECC
T ss_pred EEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCc
Confidence 3455788899888875 8999999877 3567888999999999999888 666555 499999998875 5677
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeC-CC--eEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEECC----eEEEEEc
Q 004203 147 GHRRTPWVVRFHPLNPTIIASGSL-DH--EVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH----KLYIWRY 219 (768)
Q Consensus 147 gH~g~V~sVafSP~dg~lLaSgS~-Dg--tVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSdd----~I~IWDl 219 (768)
.|...+..++|+| +++.|++++. ++ .|++||+.+++......+...+..++|+|||++|++++.+ .|++||+
T Consensus 264 ~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 264 DGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred CCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 8888999999999 8888888776 44 7888899988766555566788899999999999988742 4999999
Q ss_pred CCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 220 NMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 220 ~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
.+++.. .+..+. .+.+++|+|||++|++++.
T Consensus 343 ~~~~~~----~l~~~~-~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 343 ATGGVQ----VLSSTF-LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp TTCCEE----ECCCSS-SCEEEEECTTSSEEEEEEE
T ss_pred CCCCEE----EecCCC-CcCCeEEcCCCCEEEEEEc
Confidence 887642 233443 8999999999998887765
No 129
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.73 E-value=9.5e-17 Score=174.89 Aligned_cols=140 Identities=11% Similarity=0.130 Sum_probs=111.6
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCCC----CCCC---CCCeEEEEECCCCCEE------------EEEeCCCeEEEEeCCC
Q 004203 78 RDARRGLASWVEAESLHHLRPKYCP----LSPP---PRSTIAAAFSPDGKTL------------ASTHGDHTVKIIDCQT 138 (768)
Q Consensus 78 ~d~g~~LvSgs~DgsIrlWd~~t~~----L~gH---~~~VtslafSPDG~~L------------aSgS~DgtVrVWDl~t 138 (768)
.+++..|++++.|++|++||+.+++ +.+| ...|.+++|+|||+++ ++|+.|++|++||.++
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 4577899999999999999999874 4444 3478889999999987 5678899999999999
Q ss_pred CeEEEEE-----ecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCe-EEEEEcCCCCEEEEEEC
Q 004203 139 GSCLKVL-----HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPI-ASIAFHASGELLAVASG 211 (768)
Q Consensus 139 g~~l~~l-----~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V-~svafSPDG~~LatgSd 211 (768)
++.+..+ .+|...+.+..+ ++.++++++.|++|+|||+.+++++.++. |...+ ..++|+|||++|++|+.
T Consensus 270 gk~l~v~~~~~p~Gh~~~~lsg~~---sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 270 TLSVGVMLYCLPPGQAGRFLEGDV---KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TEEEEEEEECCCTTCCCCEEEEEE---ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT
T ss_pred CEEEEEEEeeccCCCcceeEcccc---CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 9988766 377666544333 47899999999999999999999999985 65544 46899999999999996
Q ss_pred Ce-EEEEEcC
Q 004203 212 HK-LYIWRYN 220 (768)
Q Consensus 212 d~-I~IWDl~ 220 (768)
|+ |+|||+.
T Consensus 347 D~TIklWd~~ 356 (356)
T 2w18_A 347 DGNIFVYHYS 356 (356)
T ss_dssp TSCEEEEEEC
T ss_pred CCcEEEecCC
Confidence 55 9999963
No 130
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.71 E-value=7.9e-16 Score=171.52 Aligned_cols=176 Identities=15% Similarity=0.111 Sum_probs=135.3
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC-----------C--------CCCCCCCeEEEEECCCCCEEE----EEeCCCeE
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC-----------P--------LSPPPRSTIAAAFSPDGKTLA----STHGDHTV 131 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~-----------~--------L~gH~~~VtslafSPDG~~La----SgS~DgtV 131 (768)
.+....+..++.++.++ +++|+.... . ...|...|++++|+|||++|+ +++.|++|
T Consensus 42 lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v 120 (434)
T 2oit_A 42 LAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSII 120 (434)
T ss_dssp EEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEE
T ss_pred EEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCceE
Confidence 33445677788888877 888764311 0 113556799999999999999 78889999
Q ss_pred EEEeCCCC--------e---EEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE-ecCCCCeEEEEE
Q 004203 132 KIIDCQTG--------S---CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-RDFYRPIASIAF 199 (768)
Q Consensus 132 rVWDl~tg--------~---~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~-l~h~~~V~svaf 199 (768)
+|||++++ + .+..+.+|...|.+++|+|+++.+|++++.|++|++||+++++.... ..|...|.+++|
T Consensus 121 ~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~w 200 (434)
T 2oit_A 121 AFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCW 200 (434)
T ss_dssp EEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEE
T ss_pred EEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEE
Confidence 99998764 2 24566789999999999995589999999999999999999866543 457889999999
Q ss_pred cCCCCEEEEEECC-eEEEEEcCCCccccCCeEeec-------CCCCeEEEEEccCCCeEEEEEe
Q 004203 200 HASGELLAVASGH-KLYIWRYNMREETSSPRIVLR-------TRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 200 SPDG~~LatgSdd-~I~IWDl~t~~~~~~~~~l~~-------h~~~V~sVaFSPDG~~LlaS~s 255 (768)
+|+|++|++++.+ .|++||++ ++... .+.. |...|.++.|++++.++++...
T Consensus 201 spdg~~lasgs~dg~v~iwd~~-~~~~~---~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~ 260 (434)
T 2oit_A 201 SPKGKQLAVGKQNGTVVQYLPT-LQEKK---VIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAA 260 (434)
T ss_dssp CTTSSCEEEEETTSCEEEECTT-CCEEE---EECCCTTCCTTSCEEEEEEEEEETTEEEEEEEE
T ss_pred cCCCCEEEEEcCCCcEEEEccC-Ccccc---cccCCcccCCCCceeEEEEEEecCceEEEEEcc
Confidence 9999999999955 59999998 32211 1111 2337999999999887665543
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=5e-15 Score=149.03 Aligned_cols=233 Identities=11% Similarity=0.047 Sum_probs=156.1
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCC-CC----CCCC-CCCeEEEEECCCCCEEEEEeC--C--CeEEEEeCCCCeEEEEE
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKY-CP----LSPP-PRSTIAAAFSPDGKTLASTHG--D--HTVKIIDCQTGSCLKVL 145 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t-~~----L~gH-~~~VtslafSPDG~~LaSgS~--D--gtVrVWDl~tg~~l~~l 145 (768)
....++..|+.+. ++.|.+||..+ ++ +..| ...|.+++|+|||++|++++. + ..|.+||+.+++ ...+
T Consensus 48 ~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~ 125 (297)
T 2ojh_A 48 NWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLM 125 (297)
T ss_dssp EECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEEC
T ss_pred EECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEe
Confidence 3445677777765 78999999988 63 3344 467899999999999999993 3 455555666655 4445
Q ss_pred ecCCCCcEEEEEccCCCCEEE-EEeCCCeEEEEEC--CCCcEEEEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcC
Q 004203 146 HGHRRTPWVVRFHPLNPTIIA-SGSLDHEVRLWNA--STAECIGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYN 220 (768)
Q Consensus 146 ~gH~g~V~sVafSP~dg~lLa-SgS~DgtVrLWDl--~sg~~i~~l~h~~~V~svafSPDG~~LatgS--dd~I~IWDl~ 220 (768)
..+. .+..++|+| +++.|+ ++..|+.++||++ .+++......+...+.+++|+|+|++|++++ ++.+++|+++
T Consensus 126 ~~~~-~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 126 TKNL-PSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp CSSS-SEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ecCC-CccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 4444 488899999 777666 7888998899885 4566555566778999999999999888776 3458888886
Q ss_pred CCccccCCeEeecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccC
Q 004203 221 MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVP 300 (768)
Q Consensus 221 t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~ 300 (768)
.... ....+..+...+..+.|+|+|++|++++........ ..+....+.+++...+....+... .
T Consensus 204 ~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~------------~~~~~~~l~~~d~~~~~~~~~~~~-~ 268 (297)
T 2ojh_A 204 VDGS--SVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDH------------PRDLDVRVQLMDMDGGNVETLFDL-F 268 (297)
T ss_dssp TTSS--CEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSC------------CSSEEEEEEEEETTSCSCEEEEEE-E
T ss_pred CCCC--CcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcc------------cccCceEEEEEecCCCCceeeecc-C
Confidence 3322 123455567789999999999988887654321100 000112455555544333222211 1
Q ss_pred CCCCCceEEEEecCCCEEEEEecCCCC
Q 004203 301 LITPPFLRPSFVRDDERISLQHTEHDS 327 (768)
Q Consensus 301 ~~slpil~psFSpDG~rIv~~~~d~~~ 327 (768)
.....+..+.|+|||++|++..+++..
T Consensus 269 ~~~~~~~~~~~spdg~~l~~~~~~~~~ 295 (297)
T 2ojh_A 269 GGQGTMNSPNWSPDGDEFAYVRYFPVE 295 (297)
T ss_dssp ESTTTSCSCCBCTTSSEEEEEEECCC-
T ss_pred CCCcccccceECCCCCEEEEEEeccCC
Confidence 112345568999999999997666543
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.69 E-value=4.5e-15 Score=154.85 Aligned_cols=174 Identities=9% Similarity=0.074 Sum_probs=134.6
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEeCCCCeE-EEEEecCCCCc
Q 004203 79 DARRGLASWVEAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTGSC-LKVLHGHRRTP 152 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~~L----~gH~~~VtslafSPDG~~LaSgS~-DgtVrVWDl~tg~~-l~~l~gH~g~V 152 (768)
+.+..+++...++.|.+||..++++ ..+...+ .++|+|||++|++++. ++.|++||+++++. ...+..+....
T Consensus 8 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 86 (331)
T 3u4y_A 8 TSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM 86 (331)
T ss_dssp CCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC
T ss_pred CCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc
Confidence 3455677888899999999987742 3455566 9999999997777766 89999999999987 77777776666
Q ss_pred EEEEEccCCCCEEEEEeCCC---eEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE--CCe-EEEEEcCCCcccc
Q 004203 153 WVVRFHPLNPTIIASGSLDH---EVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS--GHK-LYIWRYNMREETS 226 (768)
Q Consensus 153 ~sVafSP~dg~lLaSgS~Dg---tVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgS--dd~-I~IWDl~t~~~~~ 226 (768)
.+++|+| ++++++++..++ .|++||+.+++.+..+........++|+|||++|++++ ++. |++|++.......
T Consensus 87 ~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 87 ADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp CCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 5599999 888888555443 89999999999988888777889999999998666654 367 9999998654321
Q ss_pred CC-eEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 227 SP-RIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 227 ~~-~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
.. .........+..++|+|||++++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 194 (331)
T 3u4y_A 166 DTGQEFISGGTRPFNITFTPDGNFAFVAN 194 (331)
T ss_dssp EEEEEEECSSSSEEEEEECTTSSEEEEEE
T ss_pred ecCCccccCCCCccceEECCCCCEEEEEe
Confidence 11 12234456789999999999777665
No 133
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.69 E-value=1.7e-16 Score=184.41 Aligned_cols=168 Identities=9% Similarity=-0.027 Sum_probs=126.9
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC----CCCCCC---CeEEEEECCCCCEEEEEeCC---------CeEEEEeCCCCeEEE
Q 004203 80 ARRGLASWVEAESLHHLRPKYCP----LSPPPR---STIAAAFSPDGKTLASTHGD---------HTVKIIDCQTGSCLK 143 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~----L~gH~~---~VtslafSPDG~~LaSgS~D---------gtVrVWDl~tg~~l~ 143 (768)
++..+++ +.|+.|++||..+++ +..|.. .|.+++|||||++|++++.+ +.|++||+++++. .
T Consensus 27 dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~ 104 (723)
T 1xfd_A 27 DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-Q 104 (723)
T ss_dssp SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-E
T ss_pred CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-E
Confidence 3444444 678899999998773 344554 49999999999999999874 7889999999876 3
Q ss_pred EEe---cCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCC------------------eEEEEEcC
Q 004203 144 VLH---GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-YRP------------------IASIAFHA 201 (768)
Q Consensus 144 ~l~---gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h-~~~------------------V~svafSP 201 (768)
.+. +|...+..++||| |++.|++++. +.|++||+.+++....... ... +..++|+|
T Consensus 105 ~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp 182 (723)
T 1xfd_A 105 SLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP 182 (723)
T ss_dssp ECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT
T ss_pred eccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC
Confidence 343 3444588899999 9999999886 7899999999887665432 222 37899999
Q ss_pred CCCEEEEEECC-----------------------------------eEEEEEcCCCccccCCeEeec------CCCCeEE
Q 004203 202 SGELLAVASGH-----------------------------------KLYIWRYNMREETSSPRIVLR------TRRSLRA 240 (768)
Q Consensus 202 DG~~LatgSdd-----------------------------------~I~IWDl~t~~~~~~~~~l~~------h~~~V~s 240 (768)
||++|++++.+ .|++||+.+++... .+.. +...+..
T Consensus 183 Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~---~l~~~~~~~~~~~~~~~ 259 (723)
T 1xfd_A 183 DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDL---EMMPPDDPRMREYYITM 259 (723)
T ss_dssp TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCE---ECCCCCCGGGSSEEEEE
T ss_pred CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeE---EeeCCccCCCccceeEE
Confidence 99999988732 58999998776311 2222 2567899
Q ss_pred EEEccCCCeEEEEE
Q 004203 241 VHFHPHAAPLLLTA 254 (768)
Q Consensus 241 VaFSPDG~~LlaS~ 254 (768)
++|||||+++++..
T Consensus 260 ~~~SpDg~~l~~~~ 273 (723)
T 1xfd_A 260 VKWATSTKVAVTWL 273 (723)
T ss_dssp EEESSSSEEEEEEE
T ss_pred EEEeCCCeEEEEEE
Confidence 99999999765554
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.68 E-value=1.9e-15 Score=176.25 Aligned_cols=174 Identities=10% Similarity=0.045 Sum_probs=134.0
Q ss_pred EEEecCCCEEEEEeC-CC-----eEEEEeCCCCC----CCCCC------------------------CCeEEEEECCCCC
Q 004203 75 EAGRDARRGLASWVE-AE-----SLHHLRPKYCP----LSPPP------------------------RSTIAAAFSPDGK 120 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~-Dg-----sIrlWd~~t~~----L~gH~------------------------~~VtslafSPDG~ 120 (768)
.+.+.+++.|++.+. |+ .|.+||+.+++ +..+. ..|.+++|||||+
T Consensus 42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~ 121 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ 121 (741)
T ss_dssp EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred ceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence 334467788888887 77 89999998763 22222 2388999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCe--EEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC-----
Q 004203 121 TLASTHGDHTVKIIDCQTGS--CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRP----- 193 (768)
Q Consensus 121 ~LaSgS~DgtVrVWDl~tg~--~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~----- 193 (768)
+|++++. +.|++||+.+++ ....+..|...+..++|+| |+++|++++. +.|++||+.+++..........
T Consensus 122 ~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~g 198 (741)
T 2ecf_A 122 RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGNG 198 (741)
T ss_dssp EEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEES
T ss_pred EEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEeC-CcEEEEecCCCCEEEeccCCccceecc
Confidence 9999987 899999999883 3455677888899999999 9999999874 5899999999887665432221
Q ss_pred ------------eEEEEEcCCCCEEEEEE-CC---------------------------------eEEEEEcCC-Ccccc
Q 004203 194 ------------IASIAFHASGELLAVAS-GH---------------------------------KLYIWRYNM-REETS 226 (768)
Q Consensus 194 ------------V~svafSPDG~~LatgS-dd---------------------------------~I~IWDl~t-~~~~~ 226 (768)
+..++|+|||++|++++ ++ .|++||+.+ ++...
T Consensus 199 ~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~ 278 (741)
T 2ecf_A 199 IAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQW 278 (741)
T ss_dssp CCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEE
T ss_pred ccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEE
Confidence 47799999999998886 32 588889887 65322
Q ss_pred CCeEee--cCCCCeEEEEEccCCCeEEEEEe
Q 004203 227 SPRIVL--RTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 227 ~~~~l~--~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
... .+...+..++| |||++|+++..
T Consensus 279 ---~~~~~~~~~~~~~~~~-pDg~~l~~~~~ 305 (741)
T 2ecf_A 279 ---IDLGKEQDIYLARVNW-RDPQHLSFQRQ 305 (741)
T ss_dssp ---ECCCSCSSEEEEEEEE-EETTEEEEEEE
T ss_pred ---ecCCCCcceEEEEEEe-CCCCEEEEEEe
Confidence 111 36678999999 99998887764
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.67 E-value=2.4e-14 Score=164.37 Aligned_cols=260 Identities=10% Similarity=0.042 Sum_probs=179.1
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeC--CCCC----CCCCCCCeEEEEECC----CCCEEEEEeC-CCeEEEEeCCCCeEE
Q 004203 74 FEAGRDARRGLASWVEAESLHHLRP--KYCP----LSPPPRSTIAAAFSP----DGKTLASTHG-DHTVKIIDCQTGSCL 142 (768)
Q Consensus 74 ~~a~~d~g~~LvSgs~DgsIrlWd~--~t~~----L~gH~~~VtslafSP----DG~~LaSgS~-DgtVrVWDl~tg~~l 142 (768)
..+...+++.|++++.|+.|.+||+ .+.+ +. +...+..++|+| ||++|++++. +++|.+||..+++++
T Consensus 183 ~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~ 261 (543)
T 1nir_A 183 ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK 261 (543)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEE
T ss_pred eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccc
Confidence 4446678899999999999999999 5552 33 455689999999 9999999985 899999999999999
Q ss_pred EEEecC-----------CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEE--EecCCCCeEEEEEcCCCCEEEEE
Q 004203 143 KVLHGH-----------RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIG--SRDFYRPIASIAFHASGELLAVA 209 (768)
Q Consensus 143 ~~l~gH-----------~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~--~l~h~~~V~svafSPDG~~Latg 209 (768)
..+..+ ...+..+.++|++..++++...+++|.+||+.+.+.+. .+.+...+..++|+|||++|+++
T Consensus 262 ~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va 341 (543)
T 1nir_A 262 QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTA 341 (543)
T ss_dssp EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEE
T ss_pred eeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEE
Confidence 888653 22688999999666677888889999999999876544 45666778889999999988777
Q ss_pred E--CCeEEEEEcCCCccccCCeEeec----CCCCeEEEEEccCCCeEEEEEe-------eCCcCC-------CCcceeEe
Q 004203 210 S--GHKLYIWRYNMREETSSPRIVLR----TRRSLRAVHFHPHAAPLLLTAE-------VNDLDS-------SESSLTLA 269 (768)
Q Consensus 210 S--dd~I~IWDl~t~~~~~~~~~l~~----h~~~V~sVaFSPDG~~LlaS~s-------vwdl~s-------g~~~~~L~ 269 (768)
+ +++|.+||+.+++... .+.. |......+ ++|++..+++++. +|++.. ++....+.
T Consensus 342 ~~~~~~v~v~D~~tg~l~~---~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 342 ANNSNKVAVIDSKDRRLSA---LVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp EGGGTEEEEEETTTTEEEE---EEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred ecCCCeEEEEECCCCeEEE---eeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE
Confidence 6 4679999999987643 2221 43333333 5788555555542 677766 44444444
Q ss_pred ecCCc---ccCC------------------CCeEEEecCCCCCCC-Ccc-c----ccCCCCCCceEEEEecCCCEEEEE-
Q 004203 270 TSPGY---WRYP------------------PPVICMAGAHSSSHP-GLA-E----EVPLITPPFLRPSFVRDDERISLQ- 321 (768)
Q Consensus 270 t~~G~---~~~p------------------~~~V~l~d~~s~d~~-~L~-~----~~~~~slpil~psFSpDG~rIv~~- 321 (768)
...+. ..+. ...|.+++..+.+.. ... . .........+.+.|++||+.+.+.
T Consensus 418 ~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~ 497 (543)
T 1nir_A 418 GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSV 497 (543)
T ss_dssp CSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEE
T ss_pred cCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEe
Confidence 33221 1110 226777776665543 211 0 012223456689999999999986
Q ss_pred ecCCCCCcceEEeccCC
Q 004203 322 HTEHDSGATRTQQSLRS 338 (768)
Q Consensus 322 ~~d~~~Gs~~~~~~~~s 338 (768)
|+..+..+...+.+..+
T Consensus 498 ~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 498 WNGKNDSSALVVVDDKT 514 (543)
T ss_dssp ECCTTSCCEEEEEETTT
T ss_pred ecCCCCCCeEEEEECCC
Confidence 76544333444444443
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.65 E-value=1.8e-14 Score=165.46 Aligned_cols=238 Identities=12% Similarity=0.049 Sum_probs=168.1
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCC----CC-CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC--CCCeEEEEEecCCCC
Q 004203 79 DARRGLASWVEAESLHHLRPKYCP----LS-PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDC--QTGSCLKVLHGHRRT 151 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~~----L~-gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl--~tg~~l~~l~gH~g~ 151 (768)
.++..+++...|++|.+||..+++ +. ++. +.+++|+|||++|++++.|++|++||+ .+++++..+.. ...
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~ 223 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIE 223 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCC
Confidence 356778888999999999998874 33 333 899999999999999999999999999 89999888874 556
Q ss_pred cEEEEEccC---CCCEEEEEe-CCCeEEEEECCCCcEEEEecC------------CCCeEEEEEcCCCCEEEEEE--CCe
Q 004203 152 PWVVRFHPL---NPTIIASGS-LDHEVRLWNASTAECIGSRDF------------YRPIASIAFHASGELLAVAS--GHK 213 (768)
Q Consensus 152 V~sVafSP~---dg~lLaSgS-~DgtVrLWDl~sg~~i~~l~h------------~~~V~svafSPDG~~LatgS--dd~ 213 (768)
++.++|+|. +++++++++ .+++|.+||..+++++..+.. ...+..+.++|++..+++.. ++.
T Consensus 224 p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~ 303 (543)
T 1nir_A 224 ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 303 (543)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCe
Confidence 899999982 456666665 589999999999998887642 22788999999988776665 355
Q ss_pred EEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe------eCCcCCCCcceeEee----cCCcc-c------
Q 004203 214 LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLDSSESSLTLAT----SPGYW-R------ 276 (768)
Q Consensus 214 I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s------vwdl~sg~~~~~L~t----~~G~~-~------ 276 (768)
|.+||+.+.+... .....+...+..+.|+|||+++++++. +||+.+++....+.. +.+.. .
T Consensus 304 i~vvd~~~~~~l~--~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~ 381 (543)
T 1nir_A 304 VLLVNYKDIDNLT--VTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKY 381 (543)
T ss_dssp EEEEECTTSSSCE--EEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTT
T ss_pred EEEEEecCCCcce--eEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCC
Confidence 9999998765422 123346677899999999998887664 677776544443332 11100 0
Q ss_pred ---C-----CCCeEEEecCCCCCC----CCcccccCCCCCCceEEEEecCCCEEEEE
Q 004203 277 ---Y-----PPPVICMAGAHSSSH----PGLAEEVPLITPPFLRPSFVRDDERISLQ 321 (768)
Q Consensus 277 ---~-----p~~~V~l~d~~s~d~----~~L~~~~~~~slpil~psFSpDG~rIv~~ 321 (768)
| -...|.+++..+... ..+...........+...|+|||++|++.
T Consensus 382 g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~ 438 (543)
T 1nir_A 382 GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVD 438 (543)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEEC
T ss_pred ccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEe
Confidence 0 123455565544211 11222222222345678899999999974
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.65 E-value=2.3e-14 Score=148.69 Aligned_cols=175 Identities=13% Similarity=0.075 Sum_probs=128.1
Q ss_pred EEEEeCCCeEEEEeCC-CCC-----CCCCCCCeEEEEECCCCCEEEEEeCC-CeEEEEeCC--CCe--EEEEEecCCCCc
Q 004203 84 LASWVEAESLHHLRPK-YCP-----LSPPPRSTIAAAFSPDGKTLASTHGD-HTVKIIDCQ--TGS--CLKVLHGHRRTP 152 (768)
Q Consensus 84 LvSgs~DgsIrlWd~~-t~~-----L~gH~~~VtslafSPDG~~LaSgS~D-gtVrVWDl~--tg~--~l~~l~gH~g~V 152 (768)
+++...++.|++|++. .++ ...|...+.+++|+|||++|++++.+ +.|++|+++ +++ .+..+..+. .+
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~ 86 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SL 86 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CC
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CC
Confidence 3344678999999885 221 23577789999999999999988886 999999997 555 344555444 78
Q ss_pred EEEEEccCCCCEEEEEe-CCCeEEEEECC---CCcEEEEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcCC-Cccc
Q 004203 153 WVVRFHPLNPTIIASGS-LDHEVRLWNAS---TAECIGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYNM-REET 225 (768)
Q Consensus 153 ~sVafSP~dg~lLaSgS-~DgtVrLWDl~---sg~~i~~l~h~~~V~svafSPDG~~LatgS--dd~I~IWDl~t-~~~~ 225 (768)
..++|+| +++++++++ .++.|++||+. +.+....+.....+.+++|+|+|++|++++ ++.|++||+.+ ++..
T Consensus 87 ~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 87 THISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp SEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred cEEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 8999999 888776655 48899999994 444555566666789999999999888876 45699999987 4322
Q ss_pred cCC--eEeecCCCCeEEEEEccCCCeEEEEEe------eCCcC
Q 004203 226 SSP--RIVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLD 260 (768)
Q Consensus 226 ~~~--~~l~~h~~~V~sVaFSPDG~~LlaS~s------vwdl~ 260 (768)
... .........+..++|+|+|++++++.. +|+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 100 112223457899999999998877653 66664
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.65 E-value=1.2e-14 Score=168.83 Aligned_cols=228 Identities=10% Similarity=0.003 Sum_probs=153.4
Q ss_pred EEEecCCCEEEEEeCC---------CeEEEEeCCCCC---CC---CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Q 004203 75 EAGRDARRGLASWVEA---------ESLHHLRPKYCP---LS---PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG 139 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~D---------gsIrlWd~~t~~---L~---gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg 139 (768)
.+.+.+++.|+..+.+ +.|.+||+.+++ +. +|...+..++|||||++|++++. +.|++||+.++
T Consensus 66 ~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g 144 (723)
T 1xfd_A 66 YEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGK 144 (723)
T ss_dssp EEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSS
T ss_pred EEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCC
Confidence 3444567777777654 788899998774 33 45556899999999999999987 79999999999
Q ss_pred eEEEEEecCCCCc------------------EEEEEccCCCCEEEEEeCCC-----------------------------
Q 004203 140 SCLKVLHGHRRTP------------------WVVRFHPLNPTIIASGSLDH----------------------------- 172 (768)
Q Consensus 140 ~~l~~l~gH~g~V------------------~sVafSP~dg~lLaSgS~Dg----------------------------- 172 (768)
+.......+...+ ..+.|+| |++.|++++.|+
T Consensus 145 ~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 223 (723)
T 1xfd_A 145 QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGS 223 (723)
T ss_dssp CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTS
T ss_pred ceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCC
Confidence 8777666544434 7899999 999999887553
Q ss_pred -----eEEEEECCCCcEEEEec-C------CCCeEEEEEcCCCCEEEEEEC---C--eEEEEEcCCCccccCCeEeecCC
Q 004203 173 -----EVRLWNASTAECIGSRD-F------YRPIASIAFHASGELLAVASG---H--KLYIWRYNMREETSSPRIVLRTR 235 (768)
Q Consensus 173 -----tVrLWDl~sg~~i~~l~-h------~~~V~svafSPDG~~LatgSd---d--~I~IWDl~t~~~~~~~~~l~~h~ 235 (768)
+|++||+.+++....+. + ...+..++|+|||++|++.++ + .|++||+.+++... .....+.
T Consensus 224 ~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~--~~~~~~~ 301 (723)
T 1xfd_A 224 ENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK--KHEDESE 301 (723)
T ss_dssp CCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE--EEEEECS
T ss_pred CCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE--EEEeccC
Confidence 79999999987644443 2 457889999999999877752 1 29999998876432 1112233
Q ss_pred CCe----EEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEec-CCCCC---CCCcccccCCCCCCce
Q 004203 236 RSL----RAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAG-AHSSS---HPGLAEEVPLITPPFL 307 (768)
Q Consensus 236 ~~V----~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d-~~s~d---~~~L~~~~~~~slpil 307 (768)
..+ ..+.|+|||+.|++.+...+-... ....+.+++ ...+. ...+... .....
T Consensus 302 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~---------------~~~~l~~~d~~~~~~~~~~~~l~~~----~~~~~ 362 (723)
T 1xfd_A 302 AWLHRQNEEPVFSKDGRKFFFIRAIPQGGRG---------------KFYHITVSSSQPNSSNDNIQSITSG----DWDVT 362 (723)
T ss_dssp SCCCCCCCCCEECTTSCSEEEEEEECCSSSS---------------CEEEEEEECSSCCSSSCCCCBSCCS----SSCEE
T ss_pred CEEeccCCCceEcCCCCeEEEEEecccCCCc---------------ceeEEEEEeccCCCCccceeEeecC----CeEEE
Confidence 333 378999999988876332211000 001244444 22222 1122111 12233
Q ss_pred -EEEEecCCCEEEEEecCC
Q 004203 308 -RPSFVRDDERISLQHTEH 325 (768)
Q Consensus 308 -~psFSpDG~rIv~~~~d~ 325 (768)
.++|||||++|++...++
T Consensus 363 ~~~~~spdg~~l~~~~~~~ 381 (723)
T 1xfd_A 363 KILAYDEKGNKIYFLSTED 381 (723)
T ss_dssp EEEEEETTTTEEEEEESSS
T ss_pred eeeEEcCCCCEEEEEEcCC
Confidence 479999999999876554
No 139
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.64 E-value=1.2e-15 Score=177.82 Aligned_cols=165 Identities=13% Similarity=0.088 Sum_probs=121.7
Q ss_pred EEEEEeCCCeEEEEeCCCCC---C-CCCCC---CeEEEEECCCCCEEEEEeC---------CCeEEEEeCCCCeEE--EE
Q 004203 83 GLASWVEAESLHHLRPKYCP---L-SPPPR---STIAAAFSPDGKTLASTHG---------DHTVKIIDCQTGSCL--KV 144 (768)
Q Consensus 83 ~LvSgs~DgsIrlWd~~t~~---L-~gH~~---~VtslafSPDG~~LaSgS~---------DgtVrVWDl~tg~~l--~~ 144 (768)
.++..+.|+.|++||..+++ + ..|.. .|.+++|||||++|++++. |++|++||+++++.+ ..
T Consensus 28 ~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~ 107 (719)
T 1z68_A 28 EYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE 107 (719)
T ss_dssp EEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred eEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee
Confidence 34444568999999998773 2 22322 4899999999999999877 789999999999862 22
Q ss_pred EecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec--CCCCe-----------------EEEEEcCCCCE
Q 004203 145 LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD--FYRPI-----------------ASIAFHASGEL 205 (768)
Q Consensus 145 l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~--h~~~V-----------------~svafSPDG~~ 205 (768)
+ ...+..++||| ||+.|+++. |+.|++||+.+++...... +...+ ..++|+|||++
T Consensus 108 l---~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~ 182 (719)
T 1z68_A 108 L---PRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF 182 (719)
T ss_dssp C---CSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE
T ss_pred c---CcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCE
Confidence 2 24588899999 999899886 7899999999987765432 22222 48999999999
Q ss_pred EEEEECC-----------------------------------eEEEEEcCCCccc---c--CCeEeecCCCCeEEEEEcc
Q 004203 206 LAVASGH-----------------------------------KLYIWRYNMREET---S--SPRIVLRTRRSLRAVHFHP 245 (768)
Q Consensus 206 LatgSdd-----------------------------------~I~IWDl~t~~~~---~--~~~~l~~h~~~V~sVaFSP 245 (768)
|++++.+ .|++||+.+++.. . .+..+..+...+..++|||
T Consensus 183 la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp 262 (719)
T 1z68_A 183 LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT 262 (719)
T ss_dssp EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS
T ss_pred EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeC
Confidence 9998732 5889999887642 1 0011235677899999999
Q ss_pred CCCeEEE
Q 004203 246 HAAPLLL 252 (768)
Q Consensus 246 DG~~Lla 252 (768)
|++.+++
T Consensus 263 D~~~~~~ 269 (719)
T 1z68_A 263 DERVCLQ 269 (719)
T ss_dssp SSEEEEE
T ss_pred CCeEEEE
Confidence 9764443
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.64 E-value=1.5e-14 Score=168.60 Aligned_cols=226 Identities=10% Similarity=0.100 Sum_probs=152.2
Q ss_pred CCCeEEEEECCCCCEEEEEeC-CC-----eEEEEeCCCCeEEEEEecCCCC------------------------cEEEE
Q 004203 107 PRSTIAAAFSPDGKTLASTHG-DH-----TVKIIDCQTGSCLKVLHGHRRT------------------------PWVVR 156 (768)
Q Consensus 107 ~~~VtslafSPDG~~LaSgS~-Dg-----tVrVWDl~tg~~l~~l~gH~g~------------------------V~sVa 156 (768)
...|.+++|||||++|++++. |+ +|++||+++++....+..+... |..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 557999999999999999998 88 9999999999988777665433 78899
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCCC---cEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEeec
Q 004203 157 FHPLNPTIIASGSLDHEVRLWNASTA---ECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLR 233 (768)
Q Consensus 157 fSP~dg~lLaSgS~DgtVrLWDl~sg---~~i~~l~h~~~V~svafSPDG~~LatgSdd~I~IWDl~t~~~~~~~~~l~~ 233 (768)
|+| |+++|++++. +.|++||+.++ +......+...+..++|+|||++|++++++.|++||+.+++... ....
T Consensus 116 ~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~---~~~~ 190 (741)
T 2ecf_A 116 WSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQ---LTAD 190 (741)
T ss_dssp ECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEE---CCCC
T ss_pred ECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEE---eccC
Confidence 999 9999999886 89999999998 66555667788999999999999999999899999998876432 1112
Q ss_pred CCC----------------CeEEEEEccCCCeEEEEEeeCCcCC-C-------Cc--ceeE-eecCCcccCCCCeEEEec
Q 004203 234 TRR----------------SLRAVHFHPHAAPLLLTAEVNDLDS-S-------ES--SLTL-ATSPGYWRYPPPVICMAG 286 (768)
Q Consensus 234 h~~----------------~V~sVaFSPDG~~LlaS~svwdl~s-g-------~~--~~~L-~t~~G~~~~p~~~V~l~d 286 (768)
+.. .+..+.|||||++|+++........ . +. ...+ ....|. ......+.+++
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~-~~~~~~l~~~d 269 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGD-ANVQVKLGVIS 269 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTS-CCCEEEEEEEC
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCC-CCCeeEEEEEE
Confidence 222 1478999999999888765321100 0 00 0000 000111 00112566666
Q ss_pred CCC-CCCCCcccccCCCCCCceEEEEecCCCEEEEEec-CCCCCcceEEeccCCCc
Q 004203 287 AHS-SSHPGLAEEVPLITPPFLRPSFVRDDERISLQHT-EHDSGATRTQQSLRSSS 340 (768)
Q Consensus 287 ~~s-~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~-d~~~Gs~~~~~~~~ss~ 340 (768)
... +....+... ......+..+.| |||++|++... ...........+..+..
T Consensus 270 ~~~~~~~~~~~~~-~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 270 PAEQAQTQWIDLG-KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ 323 (741)
T ss_dssp SSTTCCCEEECCC-SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC
T ss_pred CCCCCceEEecCC-CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc
Confidence 555 443222211 112233457999 99999998744 22222344444444443
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.63 E-value=1e-13 Score=144.90 Aligned_cols=170 Identities=8% Similarity=0.037 Sum_probs=132.4
Q ss_pred cCCC-EEEEEeCCCeEEEEeCCCCCC----CCCCC---------CeEEEEECCCCCEEEEEe--CCCeEEEEeCCCCeEE
Q 004203 79 DARR-GLASWVEAESLHHLRPKYCPL----SPPPR---------STIAAAFSPDGKTLASTH--GDHTVKIIDCQTGSCL 142 (768)
Q Consensus 79 d~g~-~LvSgs~DgsIrlWd~~t~~L----~gH~~---------~VtslafSPDG~~LaSgS--~DgtVrVWDl~tg~~l 142 (768)
.+++ .+++...++.|.+||..+++. ..+.. .+.+++|+|||+++++++ .++.|++||.++++.+
T Consensus 98 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~ 177 (353)
T 3vgz_A 98 NTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLK 177 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEE
T ss_pred CCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceE
Confidence 4455 445556678999999987642 22221 278999999999888776 4889999999999999
Q ss_pred EEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-----CCCCeEEEEEcCCCCEEEEEEC--CeEE
Q 004203 143 KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-----FYRPIASIAFHASGELLAVASG--HKLY 215 (768)
Q Consensus 143 ~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-----h~~~V~svafSPDG~~LatgSd--d~I~ 215 (768)
..+..+...+..++|+| +++.+++++.++.|.+||+.+++....+. +...+..++|+|+|++|++++. +.|.
T Consensus 178 ~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 256 (353)
T 3vgz_A 178 TAIQNTGKMSTGLALDS-EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVL 256 (353)
T ss_dssp EEECCCCTTCCCCEEET-TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEE
T ss_pred EEecCCCCccceEEECC-CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEE
Confidence 88876667788999999 89999999999999999999998877754 3446788999999998888774 4599
Q ss_pred EEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 216 IWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 216 IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
+||+.+++... .+... . ...+.|+|||++++++.
T Consensus 257 ~~d~~~~~~~~---~~~~~-~-~~~~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 257 VVDTRNGNILA---KVAAP-E-SLAVLFNPARNEAYVTH 290 (353)
T ss_dssp EEETTTCCEEE---EEECS-S-CCCEEEETTTTEEEEEE
T ss_pred EEECCCCcEEE---EEEcC-C-CceEEECCCCCEEEEEE
Confidence 99998876533 22222 2 25799999999777665
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.63 E-value=3.5e-14 Score=164.88 Aligned_cols=235 Identities=14% Similarity=0.119 Sum_probs=161.5
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCC-----CC----CCCCCCC--------------eEEEEECCCCCEEEEEe--------
Q 004203 78 RDARRGLASWVEAESLHHLRPKY-----CP----LSPPPRS--------------TIAAAFSPDGKTLASTH-------- 126 (768)
Q Consensus 78 ~d~g~~LvSgs~DgsIrlWd~~t-----~~----L~gH~~~--------------VtslafSPDG~~LaSgS-------- 126 (768)
+.+++.|+. ..++.|.+|++.+ ++ ...+... +.++.|||||++|++++
T Consensus 129 SpdG~~la~-~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~ 207 (706)
T 2z3z_A 129 SPVGDRVAY-VRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKP 207 (706)
T ss_dssp CTTSSEEEE-EETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCC
T ss_pred CCCCCEEEE-EECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCce
Confidence 346667776 4678999999987 53 2223332 48999999999999998
Q ss_pred -------------------------CCCeEEEEeCCCCeEEEEEe--cCCCCcEEEEEccCCCCEEEEEeCCC-----eE
Q 004203 127 -------------------------GDHTVKIIDCQTGSCLKVLH--GHRRTPWVVRFHPLNPTIIASGSLDH-----EV 174 (768)
Q Consensus 127 -------------------------~DgtVrVWDl~tg~~l~~l~--gH~g~V~sVafSP~dg~lLaSgS~Dg-----tV 174 (768)
.+..|++||+++++...... .|...+..++|+| |++.|++++.|+ .|
T Consensus 208 ~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v 286 (706)
T 2z3z_A 208 TPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKV 286 (706)
T ss_dssp EEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEE
T ss_pred EEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEE
Confidence 45789999999988655443 4667789999999 999898887775 89
Q ss_pred EEEECCCC-cEEEEec--CCC---CeEEEEEcC--CCCEEEEEECC-eEEEEEcC-CCccccCCeEeecCCCCeEE-EEE
Q 004203 175 RLWNASTA-ECIGSRD--FYR---PIASIAFHA--SGELLAVASGH-KLYIWRYN-MREETSSPRIVLRTRRSLRA-VHF 243 (768)
Q Consensus 175 rLWDl~sg-~~i~~l~--h~~---~V~svafSP--DG~~LatgSdd-~I~IWDl~-t~~~~~~~~~l~~h~~~V~s-VaF 243 (768)
++||+.++ +...... ... .+..++|+| ||++|+++..+ .+++|+++ +++. ...+..+...+.. +.|
T Consensus 287 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~---~~~l~~~~~~v~~~~~~ 363 (706)
T 2z3z_A 287 NAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRL---IRQVTKGEWEVTNFAGF 363 (706)
T ss_dssp EEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCE---EEECCCSSSCEEEEEEE
T ss_pred EEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCE---EEecCCCCeEEEeeeEE
Confidence 99999998 4333322 222 346789999 99988887754 48888776 3332 2245556777877 899
Q ss_pred ccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEec
Q 004203 244 HPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHT 323 (768)
Q Consensus 244 SPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~ 323 (768)
+|||+.|++++....-. ...+..++...+....+. ....+..+.|||||++|++...
T Consensus 364 spdg~~l~~~~~~~~~~------------------~~~l~~~d~~~~~~~~l~-----~~~~~~~~~~spdg~~l~~~~~ 420 (706)
T 2z3z_A 364 DPKGTRLYFESTEASPL------------------ERHFYCIDIKGGKTKDLT-----PESGMHRTQLSPDGSAIIDIFQ 420 (706)
T ss_dssp CTTSSEEEEEESSSCTT------------------CBEEEEEETTCCCCEESC-----CSSSEEEEEECTTSSEEEEEEE
T ss_pred cCCCCEEEEEecCCCCc------------------eEEEEEEEcCCCCceecc-----CCCceEEEEECCCCCEEEEEec
Confidence 99999888776532100 012333333332211111 1123457999999999999877
Q ss_pred CCCCCcceEEeccCCCc
Q 004203 324 EHDSGATRTQQSLRSSS 340 (768)
Q Consensus 324 d~~~Gs~~~~~~~~ss~ 340 (768)
+...+...+..+..+..
T Consensus 421 ~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 421 SPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CSSCSCEEEEEESSSCE
T ss_pred CCCCCcEEEEEECCCCe
Confidence 77777777777776554
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.62 E-value=9.4e-14 Score=145.24 Aligned_cols=176 Identities=12% Similarity=0.049 Sum_probs=134.1
Q ss_pred EEEecCCCEEEEEeC-------CCeEEEEeCCCCCCC---CCCCCeEEEEECCCCCEEEEE-eCCCeEEEEeCCCCeEEE
Q 004203 75 EAGRDARRGLASWVE-------AESLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLK 143 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~-------DgsIrlWd~~t~~L~---gH~~~VtslafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~ 143 (768)
.+...++..++.... ++.|.+||..+.+.. .....+.+++|+|||++++.+ ..++.|.+||.++++.+.
T Consensus 46 ~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 125 (353)
T 3vgz_A 46 MAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKG 125 (353)
T ss_dssp EEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEE
T ss_pred eEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEE
Confidence 344456666666553 568999999877421 233457889999999966655 557999999999999888
Q ss_pred EEecCCCC---------cEEEEEccCCCCEEEEEe--CCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEC
Q 004203 144 VLHGHRRT---------PWVVRFHPLNPTIIASGS--LDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG 211 (768)
Q Consensus 144 ~l~gH~g~---------V~sVafSP~dg~lLaSgS--~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSd 211 (768)
.+..+... +..+.|+| ++++++.+. .++.|++||+.+++.+..+. +...+..++|+|+|++|++++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 204 (353)
T 3vgz_A 126 RLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA 204 (353)
T ss_dssp EEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT
T ss_pred EEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC
Confidence 88765432 68899999 777666655 47899999999999988887 5566889999999999988885
Q ss_pred -CeEEEEEcCCCccccCCeEee----cCCCCeEEEEEccCCCeEEEEE
Q 004203 212 -HKLYIWRYNMREETSSPRIVL----RTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 212 -d~I~IWDl~t~~~~~~~~~l~----~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
+.|.+||+.+++... .+. ++...+..++|+|+|++++++.
T Consensus 205 ~~~i~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 205 DGELITIDTADNKILS---RKKLLDDGKEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp TSEEEEEETTTTEEEE---EEECCCSSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCeEEE---EEEcCCCCCCcccceEEECCCCCEEEEEe
Confidence 459999999887543 222 2455688999999999877665
No 144
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.62 E-value=2.3e-14 Score=169.21 Aligned_cols=170 Identities=13% Similarity=0.076 Sum_probs=123.4
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCC----CCCCCC-----CeEEEEECCCCCEEEEEeCC---------CeEEEEeCCCCe
Q 004203 79 DARRGLASWVEAESLHHLRPKYCP----LSPPPR-----STIAAAFSPDGKTLASTHGD---------HTVKIIDCQTGS 140 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~~----L~gH~~-----~VtslafSPDG~~LaSgS~D---------gtVrVWDl~tg~ 140 (768)
.++..+++. |+.|++||..+++ +.+|.. ...++.|||||++|++++.+ +.+++||+++++
T Consensus 26 ~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~ 103 (740)
T 4a5s_A 26 SDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ 103 (740)
T ss_dssp SSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred CCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc
Confidence 345666665 8999999998773 344443 23458999999999999886 567799999998
Q ss_pred EEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec--CCCCe-----------------EEEEEcC
Q 004203 141 CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD--FYRPI-----------------ASIAFHA 201 (768)
Q Consensus 141 ~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~--h~~~V-----------------~svafSP 201 (768)
.. .+..|.+.+..++||| ||+.||++. |+.|++||+.+++..+... +...+ ..+.|+|
T Consensus 104 ~~-~l~~~~~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp 180 (740)
T 4a5s_A 104 LI-TEERIPNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP 180 (740)
T ss_dssp EC-CSSCCCTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT
T ss_pred EE-EcccCCCcceeeEECC-CCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECC
Confidence 54 4667778899999999 999898885 6899999999887655432 22222 3589999
Q ss_pred CCCEEEEEE-C-C-----------------------------------eEEEEEcCC---CccccCCeEee------cCC
Q 004203 202 SGELLAVAS-G-H-----------------------------------KLYIWRYNM---REETSSPRIVL------RTR 235 (768)
Q Consensus 202 DG~~LatgS-d-d-----------------------------------~I~IWDl~t---~~~~~~~~~l~------~h~ 235 (768)
||+.|++.+ + . +|++||+.+ ++... ...+. ++.
T Consensus 181 Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~-~~~l~~~~~~~~~~ 259 (740)
T 4a5s_A 181 NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT-SIQITAPASMLIGD 259 (740)
T ss_dssp TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC-EEEECCCHHHHTSC
T ss_pred CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce-EEEecCCccCCCCC
Confidence 999999875 1 1 377888877 52111 11222 266
Q ss_pred CCeEEEEEccCCCeEEEEE
Q 004203 236 RSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 236 ~~V~sVaFSPDG~~LlaS~ 254 (768)
..+..++|+|||+.++...
T Consensus 260 ~~~~~~~wspdg~~~~~~~ 278 (740)
T 4a5s_A 260 HYLCDVTWATQERISLQWL 278 (740)
T ss_dssp EEEEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEeCCCeEEEEEe
Confidence 7799999999999665443
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.61 E-value=8.1e-14 Score=147.08 Aligned_cols=174 Identities=11% Similarity=0.098 Sum_probs=120.2
Q ss_pred cCCCEEEEEeC---CCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCC-CCe--EEEEE
Q 004203 79 DARRGLASWVE---AESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQ-TGS--CLKVL 145 (768)
Q Consensus 79 d~g~~LvSgs~---DgsIrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS-~DgtVrVWDl~-tg~--~l~~l 145 (768)
.+++ |+..+. ++.|.+|++..++ +..+...+..++|+|||++|++++ .++.|++||+. +++ .+..+
T Consensus 49 pdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~ 127 (347)
T 3hfq_A 49 AKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTV 127 (347)
T ss_dssp TTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEE
T ss_pred cCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeeccee
Confidence 3444 554443 5889999987553 234677889999999999999888 68999999995 333 33333
Q ss_pred ecC---------CCCcEEEEEccCCCCEEEEEeCCCeEEEEECC-CCcEEEE--e--cCCCCeEEEEEcCCCCEEEEEE-
Q 004203 146 HGH---------RRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS-TAECIGS--R--DFYRPIASIAFHASGELLAVAS- 210 (768)
Q Consensus 146 ~gH---------~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~-sg~~i~~--l--~h~~~V~svafSPDG~~LatgS- 210 (768)
... ...+..++|+| +++++++...++.|++||+. +++.... + ........++|+|||++|++++
T Consensus 128 ~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 206 (347)
T 3hfq_A 128 QHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE 206 (347)
T ss_dssp ECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred ecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC
Confidence 221 12478899999 77777777778899999998 5554322 1 2334678899999999888776
Q ss_pred -CCeEEEEEcCC--CccccCCeEeecCC------CCeEEEEEccCCCeEEEEEe
Q 004203 211 -GHKLYIWRYNM--REETSSPRIVLRTR------RSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 211 -dd~I~IWDl~t--~~~~~~~~~l~~h~------~~V~sVaFSPDG~~LlaS~s 255 (768)
++.|++|+++. ++... ........ ..+..++|+|||++|+++..
T Consensus 207 ~~~~v~v~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 207 LSSQIASLKYDTQTGAFTQ-LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp TTTEEEEEEEETTTTEEEE-EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEEEecCCCCceEE-eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC
Confidence 34599999985 32211 11111111 45889999999998866554
No 146
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.61 E-value=1e-13 Score=143.42 Aligned_cols=141 Identities=15% Similarity=0.167 Sum_probs=113.5
Q ss_pred CEEEEEeCCCeEEEEeCCCCCC----C-CCCC-CeEEEEECCCCCEEE-EEeCCCeEEEEeCCCCeEEEEEecC-----C
Q 004203 82 RGLASWVEAESLHHLRPKYCPL----S-PPPR-STIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHGH-----R 149 (768)
Q Consensus 82 ~~LvSgs~DgsIrlWd~~t~~L----~-gH~~-~VtslafSPDG~~La-SgS~DgtVrVWDl~tg~~l~~l~gH-----~ 149 (768)
..+++...++.|.+||..+++. . ++.. .+..++|+|||++++ ++..++.|++||+.+++.+..+... .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4678889999999999987632 1 2222 588999999998765 4556889999999999988777532 1
Q ss_pred CCcEEEEEccCCCCEEEEEe------------CCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEE
Q 004203 150 RTPWVVRFHPLNPTIIASGS------------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIW 217 (768)
Q Consensus 150 g~V~sVafSP~dg~lLaSgS------------~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSdd~I~IW 217 (768)
..+..++|+| ++++++++. .++.|++||+.+++.+..+.....+..++|+|||++|+++ ++.|++|
T Consensus 82 ~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~~~ 159 (337)
T 1pby_B 82 KSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLHVM 159 (337)
T ss_dssp ECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEEEE
T ss_pred ccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEEEE
Confidence 2577899999 888888876 5799999999999888887766778889999999988887 6679999
Q ss_pred EcCCCcc
Q 004203 218 RYNMREE 224 (768)
Q Consensus 218 Dl~t~~~ 224 (768)
|+.+++.
T Consensus 160 d~~~~~~ 166 (337)
T 1pby_B 160 DPEAGTL 166 (337)
T ss_dssp ETTTTEE
T ss_pred ECCCCcE
Confidence 9988764
No 147
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.61 E-value=1.4e-14 Score=161.53 Aligned_cols=148 Identities=10% Similarity=0.009 Sum_probs=121.6
Q ss_pred EEEEecCCCEEE----EEeCCCeEEEEeCCCC---------------CCCCCCCCeEEEEECCC-CCEEEEEeCCCeEEE
Q 004203 74 FEAGRDARRGLA----SWVEAESLHHLRPKYC---------------PLSPPPRSTIAAAFSPD-GKTLASTHGDHTVKI 133 (768)
Q Consensus 74 ~~a~~d~g~~Lv----Sgs~DgsIrlWd~~t~---------------~L~gH~~~VtslafSPD-G~~LaSgS~DgtVrV 133 (768)
..+...++..|+ +++.|+.|++||+.+. .+.+|...|.+++|+|+ +++|++++.|++|++
T Consensus 97 ~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~i 176 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAV 176 (434)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred EEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEE
Confidence 344556677888 7889999999997532 35579999999999997 899999999999999
Q ss_pred EeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-C-------CCCeEEEEEcCCCCE
Q 004203 134 IDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-F-------YRPIASIAFHASGEL 205 (768)
Q Consensus 134 WDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h-------~~~V~svafSPDG~~ 205 (768)
||++++..+....+|...|.+++|+| ++++|++|+.|++|++||++ ++....+. + ...+.+++|++++.+
T Consensus 177 wD~~~~~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 177 LQVTETVKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp EEESSSEEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred EEcCCCcceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceE
Confidence 99999987777788999999999999 89999999999999999998 55554432 1 237899999999988
Q ss_pred EEEEE--CC------eEEEEEcCCCc
Q 004203 206 LAVAS--GH------KLYIWRYNMRE 223 (768)
Q Consensus 206 LatgS--dd------~I~IWDl~t~~ 223 (768)
+++.+ +| .+++||+++.+
T Consensus 255 l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 255 AIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEEEccCCCccCCCCceEEEEeccCC
Confidence 76554 22 29999998764
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.59 E-value=2.3e-13 Score=141.82 Aligned_cols=178 Identities=12% Similarity=0.101 Sum_probs=128.5
Q ss_pred EEEEecCCCEEEEEeC-CCeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCEEEEEeCCC---eEEEEeCCCCeEEEE
Q 004203 74 FEAGRDARRGLASWVE-AESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLASTHGDH---TVKIIDCQTGSCLKV 144 (768)
Q Consensus 74 ~~a~~d~g~~LvSgs~-DgsIrlWd~~t~~L-----~gH~~~VtslafSPDG~~LaSgS~Dg---tVrVWDl~tg~~l~~ 144 (768)
..+...++..++.... ++.|.+||..++++ ..+...+.+++|+|||++|+++..++ .|++||+++++.+..
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE
Confidence 3444455665555544 88999999987754 24455555599999999999555553 999999999998888
Q ss_pred EecCCCCcEEEEEccCCCC-EEEEEeCCCe-EEEEECCCCcEE-----EEecCCCCeEEEEEcCCCCEEEEEE--CCeEE
Q 004203 145 LHGHRRTPWVVRFHPLNPT-IIASGSLDHE-VRLWNASTAECI-----GSRDFYRPIASIAFHASGELLAVAS--GHKLY 215 (768)
Q Consensus 145 l~gH~g~V~sVafSP~dg~-lLaSgS~Dgt-VrLWDl~sg~~i-----~~l~h~~~V~svafSPDG~~LatgS--dd~I~ 215 (768)
+..+ ..+..++|+| +++ ++++...++. |++|++.....+ ..+........++|+|||++|++++ ++.|+
T Consensus 124 ~~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 201 (331)
T 3u4y_A 124 IPIP-YDAVGIAISP-NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIG 201 (331)
T ss_dssp EECC-TTEEEEEECT-TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EECC-CCccceEECC-CCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEE
Confidence 7754 4578999999 766 5555566688 999999864332 2234456688999999999877776 34599
Q ss_pred EEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 216 IWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 216 IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
+||+.+++... ..........+..++|+|||++++++.
T Consensus 202 v~d~~~~~~~~-~~~~~~~~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 202 ILETQNPENIT-LLNAVGTNNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp EEECSSTTSCE-EEEEEECSSCCCCEEECTTSSEEEEEC
T ss_pred EEECCCCcccc-eeeeccCCCCCceEEECCCCCEEEEEE
Confidence 99998776511 012333457788999999999777654
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.59 E-value=3.3e-14 Score=165.11 Aligned_cols=168 Identities=14% Similarity=0.143 Sum_probs=124.3
Q ss_pred CEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-----CeEEEEEecCCCC--
Q 004203 82 RGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT-----GSCLKVLHGHRRT-- 151 (768)
Q Consensus 82 ~~LvSgs~DgsIrlWd~~t~~---L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~t-----g~~l~~l~gH~g~-- 151 (768)
+.++.. .++.|++||+.+++ +..+...+.+++|||||++|+++ .|+.|++||+.+ ++.......+...
T Consensus 93 ~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~ 170 (706)
T 2z3z_A 93 GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLV 170 (706)
T ss_dssp TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEE
T ss_pred CeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeE
Confidence 444433 35999999998773 45677889999999999999985 679999999998 8766555444332
Q ss_pred ------------cEEEEEccCCCCEEEEEe---------------------------------CCCeEEEEECCCCcEEE
Q 004203 152 ------------PWVVRFHPLNPTIIASGS---------------------------------LDHEVRLWNASTAECIG 186 (768)
Q Consensus 152 ------------V~sVafSP~dg~lLaSgS---------------------------------~DgtVrLWDl~sg~~i~ 186 (768)
+..+.|+| |+++|++++ .+..|++||+.+++...
T Consensus 171 ~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~ 249 (706)
T 2z3z_A 171 YGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY 249 (706)
T ss_dssp ESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE
T ss_pred cccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe
Confidence 47899999 999999987 44689999999988765
Q ss_pred Ee---cCCCCeEEEEEcCCCCEEEEEE-CC-----eEEEEEcCCCccccCCeEeecCCC---CeEEEEEcc--CCCeEEE
Q 004203 187 SR---DFYRPIASIAFHASGELLAVAS-GH-----KLYIWRYNMREETSSPRIVLRTRR---SLRAVHFHP--HAAPLLL 252 (768)
Q Consensus 187 ~l---~h~~~V~svafSPDG~~LatgS-dd-----~I~IWDl~t~~~~~~~~~l~~h~~---~V~sVaFSP--DG~~Lla 252 (768)
.. .+...+..++|+|||++|++++ +. .|++||+.+++... ......+.. .+..+.|+| ||+++++
T Consensus 250 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~-~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~ 328 (706)
T 2z3z_A 250 LQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVR-TLFVETDKHYVEPLHPLTFLPGSNNQFIWQ 328 (706)
T ss_dssp CCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEE-EEEEEECSSCCCCCSCCEECTTCSSEEEEE
T ss_pred eccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceee-EEEEccCCCeECccCCceeecCCCCEEEEE
Confidence 54 3556789999999999888876 33 59999998873322 111112222 346789999 9985544
Q ss_pred E
Q 004203 253 T 253 (768)
Q Consensus 253 S 253 (768)
+
T Consensus 329 ~ 329 (706)
T 2z3z_A 329 S 329 (706)
T ss_dssp E
T ss_pred E
Confidence 3
No 150
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.58 E-value=5.9e-13 Score=141.89 Aligned_cols=172 Identities=10% Similarity=-0.019 Sum_probs=127.5
Q ss_pred cCCCEEEEEeC-CC--eEEEEeCCCCC----CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCC
Q 004203 79 DARRGLASWVE-AE--SLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT 151 (768)
Q Consensus 79 d~g~~LvSgs~-Dg--sIrlWd~~t~~----L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~ 151 (768)
.+++.|+..+. ++ .|.+||+.+++ ..++...+..+.|+|||++|++++.++.|++||+.+++....+..+.+.
T Consensus 45 pDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~ 124 (388)
T 3pe7_A 45 RDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEW 124 (388)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTE
T ss_pred CCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhc
Confidence 35555555555 55 47888887762 3345555557889999999999999999999999999988777777665
Q ss_pred cEEEEE--ccCCCCEEEEEe----------------------CCCeEEEEECCCCcEEEEecCCCCeEEEEEcC-CCCEE
Q 004203 152 PWVVRF--HPLNPTIIASGS----------------------LDHEVRLWNASTAECIGSRDFYRPIASIAFHA-SGELL 206 (768)
Q Consensus 152 V~sVaf--SP~dg~lLaSgS----------------------~DgtVrLWDl~sg~~i~~l~h~~~V~svafSP-DG~~L 206 (768)
+....| +| ++.+++... .+..|++||+.+++......+...+..++|+| ||+.|
T Consensus 125 ~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l 203 (388)
T 3pe7_A 125 VGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTV 203 (388)
T ss_dssp EEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEE
T ss_pred ccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEE
Confidence 544444 78 888877432 34689999999998877777778899999999 99999
Q ss_pred EEEECC-------eEEEEEcCCCccccCCeEeecCC--CCeEEEEEccCCCeEEEEEe
Q 004203 207 AVASGH-------KLYIWRYNMREETSSPRIVLRTR--RSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 207 atgSdd-------~I~IWDl~t~~~~~~~~~l~~h~--~~V~sVaFSPDG~~LlaS~s 255 (768)
++.+.+ .|+++|+...... .+..+. ..+..+.|+|||+.|++.+.
T Consensus 204 ~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 204 AFCHEGPHDLVDARMWLINEDGTNMR----KVKTHAEGESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp EEEECSCTTTSSCSEEEEETTSCCCE----ESCCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred EEEEecCCCCCcceEEEEeCCCCceE----EeeeCCCCcccccceECCCCCEEEEEec
Confidence 887742 3888887665432 233333 35788999999998876543
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.57 E-value=2.6e-14 Score=166.61 Aligned_cols=176 Identities=10% Similarity=0.073 Sum_probs=126.8
Q ss_pred EEecCCCEEEEEeC---------CCeEEEEeCCCCCC---CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEE
Q 004203 76 AGRDARRGLASWVE---------AESLHHLRPKYCPL---SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK 143 (768)
Q Consensus 76 a~~d~g~~LvSgs~---------DgsIrlWd~~t~~L---~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~ 143 (768)
+.+.+++.|+..+. ++.|++||+.+++. ......+..++|||||++|+++. |++|++||+.+++...
T Consensus 66 ~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~ 144 (719)
T 1z68_A 66 GLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQ 144 (719)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEE
T ss_pred EECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEE
Confidence 34456777776655 68999999988765 44556799999999999999886 7899999999887654
Q ss_pred EE-ecCCCCc-----------------EEEEEccCCCCEEEEEeCCC---------------------------------
Q 004203 144 VL-HGHRRTP-----------------WVVRFHPLNPTIIASGSLDH--------------------------------- 172 (768)
Q Consensus 144 ~l-~gH~g~V-----------------~sVafSP~dg~lLaSgS~Dg--------------------------------- 172 (768)
.. .++...| ..+.||| |++.|++++.|.
T Consensus 145 l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~ 223 (719)
T 1z68_A 145 ITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPV 223 (719)
T ss_dssp CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCE
T ss_pred EecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCe
Confidence 33 2322222 4799999 999999987652
Q ss_pred -eEEEEECCCCcEE---EE------ecCCCCeEEEEEcCCCCEEEEEECC-----eEEEEE----cCCCccccCCe-Eee
Q 004203 173 -EVRLWNASTAECI---GS------RDFYRPIASIAFHASGELLAVASGH-----KLYIWR----YNMREETSSPR-IVL 232 (768)
Q Consensus 173 -tVrLWDl~sg~~i---~~------l~h~~~V~svafSPDG~~LatgSdd-----~I~IWD----l~t~~~~~~~~-~l~ 232 (768)
+|++||+.+++.. .. ..+...+..++|+||++++++..+. .|++|| +.+++...... ...
T Consensus 224 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~ 303 (719)
T 1z68_A 224 VRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEE 303 (719)
T ss_dssp EEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEE
T ss_pred eEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccc
Confidence 7899999988752 21 1366678999999998877775421 288999 66665432110 003
Q ss_pred cCCCCeE-----EEEEccCCCeEEEE
Q 004203 233 RTRRSLR-----AVHFHPHAAPLLLT 253 (768)
Q Consensus 233 ~h~~~V~-----sVaFSPDG~~LlaS 253 (768)
.+...+. .+.|+|||+.+++.
T Consensus 304 ~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 304 SRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp CSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred cCCceEccccCCccEECCCCCeEEEE
Confidence 5566666 88999999977663
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.55 E-value=5.2e-13 Score=163.60 Aligned_cols=169 Identities=10% Similarity=0.012 Sum_probs=142.9
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC---CCCCCCC-CeEEEEECCCCCEEEEEeCCCeEE-EEeCCCCeEEEEEecCCCCcE
Q 004203 79 DARRGLASWVEAESLHHLRPKYC---PLSPPPR-STIAAAFSPDGKTLASTHGDHTVK-IIDCQTGSCLKVLHGHRRTPW 153 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~---~L~gH~~-~VtslafSPDG~~LaSgS~DgtVr-VWDl~tg~~l~~l~gH~g~V~ 153 (768)
.++..|+..+ ++.|.+|+...+ .+..|.. .+..++|+ ||+.|++++.+..++ +||+.+++... +.+|...+.
T Consensus 306 pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~ 382 (1045)
T 1k32_A 306 LDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVF 382 (1045)
T ss_dssp CGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEE
T ss_pred CCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCcccee
Confidence 5566666666 788999998866 3667887 89999999 999999999998999 99998877544 448888899
Q ss_pred EEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEC-C----------eEEEEEcCC
Q 004203 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG-H----------KLYIWRYNM 221 (768)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~~LatgSd-d----------~I~IWDl~t 221 (768)
.++|+| |+++|++++.++.|++||+.+++..... .+...+..++|+|||++|++++. + .|++||+.+
T Consensus 383 ~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 383 AMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred eeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 999999 9999999999999999999999888776 68888999999999999988763 3 499999988
Q ss_pred CccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
++. ..+..+...+..+.|+|||++|++.+.
T Consensus 462 g~~----~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 462 RKI----FAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TEE----EECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CcE----EEeeCCCcccCCceEcCCCCEEEEEec
Confidence 752 245667788999999999998888765
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.55 E-value=4.8e-13 Score=139.34 Aligned_cols=143 Identities=13% Similarity=0.078 Sum_probs=110.7
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCC----CCCCC-CCeEEEEECCCCCEEE-EEeCCCeEEEEeCCCCeEEEEEecCC---
Q 004203 79 DARRGLASWVEAESLHHLRPKYCP----LSPPP-RSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHGHR--- 149 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~~----L~gH~-~~VtslafSPDG~~La-SgS~DgtVrVWDl~tg~~l~~l~gH~--- 149 (768)
.++..+++...++.|.+||..+++ +..+. ..+..++|+|||++++ +...++.|++||+++++.+..+..+.
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence 466778889999999999998763 22222 2578999999998765 44568999999999999887776432
Q ss_pred ---CCcEEEEEccCCCCEEEEEeCC------------CeEEEEECCCCcE---EEEecCCCCeEEEEEcCCCCEEEEEEC
Q 004203 150 ---RTPWVVRFHPLNPTIIASGSLD------------HEVRLWNASTAEC---IGSRDFYRPIASIAFHASGELLAVASG 211 (768)
Q Consensus 150 ---g~V~sVafSP~dg~lLaSgS~D------------gtVrLWDl~sg~~---i~~l~h~~~V~svafSPDG~~LatgSd 211 (768)
..+..++|+| +++++++++.+ +.|++||+.+++. +..+.+...+.+++|+|||+ ++++ +
T Consensus 89 ~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~-~ 165 (349)
T 1jmx_B 89 EVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVA-G 165 (349)
T ss_dssp EEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEE-S
T ss_pred cccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEc-c
Confidence 2378899999 88888888865 8999999998543 34455666788999999999 5554 4
Q ss_pred CeEEEEEcCCCcc
Q 004203 212 HKLYIWRYNMREE 224 (768)
Q Consensus 212 d~I~IWDl~t~~~ 224 (768)
+.|++||+.+++.
T Consensus 166 ~~i~~~d~~~~~~ 178 (349)
T 1jmx_B 166 PDIYKMDVKTGKY 178 (349)
T ss_dssp SSEEEECTTTCCE
T ss_pred CcEEEEeCCCCce
Confidence 4599999987764
No 154
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.54 E-value=2.3e-13 Score=160.69 Aligned_cols=225 Identities=8% Similarity=0.042 Sum_probs=146.7
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCc-----EEEEEccCCCCEEEEEeCC---------CeE
Q 004203 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTP-----WVVRFHPLNPTIIASGSLD---------HEV 174 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V-----~sVafSP~dg~lLaSgS~D---------gtV 174 (768)
....+.|+|||++|+++ |++|++||+.++++...+.+|.... ..+.||| |++.|++++.+ +.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEEccceEE
Confidence 35588999999999886 9999999999999988888876432 3478999 99999998876 567
Q ss_pred EEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEeecCCCCe----------------
Q 004203 175 RLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLRTRRSL---------------- 238 (768)
Q Consensus 175 rLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSdd~I~IWDl~t~~~~~~~~~l~~h~~~V---------------- 238 (768)
++||+.+++......+...+...+|+|||+.||++.++.|++||+.+++.... ...++...+
T Consensus 95 ~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~l--t~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 95 DIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRI--TWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEEC--CSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEE--cCCCCccceecCcccccccchhcCC
Confidence 79999999877666677889999999999999999999999999987764321 111222222
Q ss_pred -EEEEEccCCCeEEEEEeeCC-cCCC----------CcceeEe---ecCCcccCCCCeEEEecCCC---CCCCCcccccC
Q 004203 239 -RAVHFHPHAAPLLLTAEVND-LDSS----------ESSLTLA---TSPGYWRYPPPVICMAGAHS---SSHPGLAEEVP 300 (768)
Q Consensus 239 -~sVaFSPDG~~LlaS~svwd-l~sg----------~~~~~L~---t~~G~~~~p~~~V~l~d~~s---~d~~~L~~~~~ 300 (768)
..+.|||||++|++...... ++.+ ....... ...|. ..+...+.+++... +..........
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~-~~~~~~l~v~d~~~~~~~~~~~~~~l~~ 251 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGA-VNPTVKFFVVNTDSLSSVTNATSIQITA 251 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTS-CCCEEEEEEEETTSCCSSSCCCEEEECC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcC-cCCeeEEEEEECCCCCCCCcceEEEecC
Confidence 35899999998888764221 1100 0000000 01111 01112466777666 42211111111
Q ss_pred -----CCCCCceEEEEecCCCEEEEEecCCCCCcceEEeccCCC
Q 004203 301 -----LITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSS 339 (768)
Q Consensus 301 -----~~slpil~psFSpDG~rIv~~~~d~~~Gs~~~~~~~~ss 339 (768)
+...-+..++|||||+.+++..+.......+...+..+.
T Consensus 252 ~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg 295 (740)
T 4a5s_A 252 PASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDES 295 (740)
T ss_dssp CHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETT
T ss_pred CccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCC
Confidence 112224479999999977776554433334555555443
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.53 E-value=6.5e-13 Score=137.34 Aligned_cols=167 Identities=17% Similarity=0.125 Sum_probs=120.8
Q ss_pred cCCCE-EEEEeCCCeEEEEeCCCCCCC-----CC----CCCeEEEEECCCCCEEEEEe------------CCCeEEEEeC
Q 004203 79 DARRG-LASWVEAESLHHLRPKYCPLS-----PP----PRSTIAAAFSPDGKTLASTH------------GDHTVKIIDC 136 (768)
Q Consensus 79 d~g~~-LvSgs~DgsIrlWd~~t~~L~-----gH----~~~VtslafSPDG~~LaSgS------------~DgtVrVWDl 136 (768)
.++.. +++...++.|.+||..+++.. ++ ...+.+++|+|||++|+++. .++.|++||+
T Consensus 43 ~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~ 122 (337)
T 1pby_B 43 PGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDA 122 (337)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEET
T ss_pred CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEEC
Confidence 34444 456666889999999876321 11 22677899999999999886 5799999999
Q ss_pred CCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-------------------------
Q 004203 137 QTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY------------------------- 191 (768)
Q Consensus 137 ~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~------------------------- 191 (768)
++++.+..+.. ...+..++|+| ++++++++ ++.|++||+.+++....+...
T Consensus 123 ~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 198 (337)
T 1pby_B 123 ETLSRRKAFEA-PRQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVM 198 (337)
T ss_dssp TTTEEEEEEEC-CSSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEE
T ss_pred CCCcEEEEEeC-CCCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCce
Confidence 99998887765 45578899999 88877776 688999999988776544211
Q ss_pred ------------------------------------------CCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCe
Q 004203 192 ------------------------------------------RPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPR 229 (768)
Q Consensus 192 ------------------------------------------~~V~svafSPDG~~LatgSdd~I~IWDl~t~~~~~~~~ 229 (768)
..+..++|+|||++|+++ ++.|++||+.+++...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~--- 274 (337)
T 1pby_B 199 ATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIK--- 274 (337)
T ss_dssp EEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEE---
T ss_pred eeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcc---
Confidence 123357888888887777 5668888887765432
Q ss_pred EeecCCCCeEEEEEccCCCeEEEEE
Q 004203 230 IVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 230 ~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
.......+.+++|+|||+++++++
T Consensus 275 -~~~~~~~~~~~~~s~dg~~l~~~~ 298 (337)
T 1pby_B 275 -RVPLPHSYYSVNVSTDGSTVWLGG 298 (337)
T ss_dssp -EEECSSCCCEEEECTTSCEEEEES
T ss_pred -eecCCCceeeEEECCCCCEEEEEc
Confidence 222335677888888888776653
No 156
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.53 E-value=2.2e-12 Score=133.69 Aligned_cols=175 Identities=11% Similarity=0.091 Sum_probs=124.4
Q ss_pred EEecCCCEEEEEeCC-CeEEEEeCC--CCC------CCCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEeCC---CCeEE
Q 004203 76 AGRDARRGLASWVEA-ESLHHLRPK--YCP------LSPPPRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQ---TGSCL 142 (768)
Q Consensus 76 a~~d~g~~LvSgs~D-gsIrlWd~~--t~~------L~gH~~~VtslafSPDG~~LaSgS~-DgtVrVWDl~---tg~~l 142 (768)
+...++..|+.+..+ +.|.+|++. +++ +..+ ..+..++|+|||++|++++. ++.|++||+. +++.+
T Consensus 44 ~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~ 122 (343)
T 1ri6_A 44 VVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV 122 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEE
T ss_pred EECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccc
Confidence 344567777777766 899999987 432 2223 37899999999998877765 8899999994 44455
Q ss_pred EEEecCCCCcEEEEEccCCCCEEEEEe-CCCeEEEEECCC-CcEEE----E--ecCCCCeEEEEEcCCCCEEEEEE--CC
Q 004203 143 KVLHGHRRTPWVVRFHPLNPTIIASGS-LDHEVRLWNAST-AECIG----S--RDFYRPIASIAFHASGELLAVAS--GH 212 (768)
Q Consensus 143 ~~l~gH~g~V~sVafSP~dg~lLaSgS-~DgtVrLWDl~s-g~~i~----~--l~h~~~V~svafSPDG~~LatgS--dd 212 (768)
..+..+ ..+..++|+| +++++++++ .|+.|++||+.+ ++... . ......+..++|+|+|++|++++ ++
T Consensus 123 ~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 123 DVVEGL-DGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp EEECCC-TTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred ccccCC-CCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence 555544 4588899999 888777776 899999999987 65432 1 22345788999999999887766 45
Q ss_pred eEEEEEcCC--CccccCCeEee------cCCCCeEEEEEccCCCeEEEEE
Q 004203 213 KLYIWRYNM--REETSSPRIVL------RTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 213 ~I~IWDl~t--~~~~~~~~~l~------~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
.|++||++. ++... ..... .....+..++|+|+|++++++.
T Consensus 201 ~i~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~ 249 (343)
T 1ri6_A 201 SVDVWELKDPHGNIEC-VQTLDMMPENFSDTRWAADIHITPDGRHLYACD 249 (343)
T ss_dssp EEEEEESSCTTSCCEE-EEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE
T ss_pred EEEEEEecCCCCcEEE-EeeccccCccccccCCccceEECCCCCEEEEEe
Confidence 599999964 22110 00111 1134677899999999887665
No 157
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.53 E-value=2.9e-13 Score=165.80 Aligned_cols=139 Identities=11% Similarity=0.011 Sum_probs=116.7
Q ss_pred CCCEEEEEeCCCeEE-EEeCCCC---CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEE
Q 004203 80 ARRGLASWVEAESLH-HLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (768)
Q Consensus 80 ~g~~LvSgs~DgsIr-lWd~~t~---~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sV 155 (768)
++..|+..+.+..+. +|+...+ .+.+|...+..++|||||++|++++.++.|++||+++++....+.+|.+.+..+
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~ 426 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDF 426 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCE
T ss_pred CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccce
Confidence 445677777777788 8898765 355788899999999999999999999999999999999888888899999999
Q ss_pred EEccCCCCEEEEEeCCC----------eEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEECC-eEEEEEc
Q 004203 156 RFHPLNPTIIASGSLDH----------EVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH-KLYIWRY 219 (768)
Q Consensus 156 afSP~dg~lLaSgS~Dg----------tVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSdd-~I~IWDl 219 (768)
+|+| |+++|++++.++ .|++||+.+++......+...+..++|+|||++|++.+++ ...+|+.
T Consensus 427 ~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 427 TISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp EECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred EECC-CCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 9999 999888877654 8999999998855555677788899999999999998853 3555553
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.51 E-value=1.1e-12 Score=138.50 Aligned_cols=148 Identities=11% Similarity=0.143 Sum_probs=104.0
Q ss_pred CCCCCeEEEEECCCCCEEEEEeC---CCeEEEEeCCCCe--EEEEEecCCCCcEEEEEccCCCCEEEEEe-CCCeEEEEE
Q 004203 105 PPPRSTIAAAFSPDGKTLASTHG---DHTVKIIDCQTGS--CLKVLHGHRRTPWVVRFHPLNPTIIASGS-LDHEVRLWN 178 (768)
Q Consensus 105 gH~~~VtslafSPDG~~LaSgS~---DgtVrVWDl~tg~--~l~~l~gH~g~V~sVafSP~dg~lLaSgS-~DgtVrLWD 178 (768)
.+...+..++|+|||+ |++++. ++.|++||+.+++ .+..+..+...+..++|+| ++++|++++ .+++|.+||
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE-ARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET-TTTEEEEEETTTTEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC-CCCEEEEEeCCCCEEEEEE
Confidence 4556788899999999 665554 6899999998776 3445556777889999999 888888877 688999999
Q ss_pred CC-CCcE--EEEecCC----------CCeEEEEEcCCCCEEEEEE-CCeEEEEEcC-CCccccCCeEeecCCCCeEEEEE
Q 004203 179 AS-TAEC--IGSRDFY----------RPIASIAFHASGELLAVAS-GHKLYIWRYN-MREETSSPRIVLRTRRSLRAVHF 243 (768)
Q Consensus 179 l~-sg~~--i~~l~h~----------~~V~svafSPDG~~LatgS-dd~I~IWDl~-t~~~~~~~~~l~~h~~~V~sVaF 243 (768)
+. +++. +..+.+. ..+.+++|+|||+++++.. ++.|++||+. +++..............+..++|
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 96 3332 3333222 2478899999999444433 3459999998 33321101111223346889999
Q ss_pred ccCCCeEEEEE
Q 004203 244 HPHAAPLLLTA 254 (768)
Q Consensus 244 SPDG~~LlaS~ 254 (768)
+|||++++++.
T Consensus 195 spdg~~l~v~~ 205 (347)
T 3hfq_A 195 SPDGQYAFLAG 205 (347)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEe
Confidence 99999777765
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.50 E-value=3.5e-13 Score=153.46 Aligned_cols=166 Identities=11% Similarity=0.061 Sum_probs=119.3
Q ss_pred EecCCCEEEEEeC-CCeEEEEeCCCC---CCCCCC-CCeEEEEECCCCCEEEEEeC---CCeEEEEeCCC---CeEEEEE
Q 004203 77 GRDARRGLASWVE-AESLHHLRPKYC---PLSPPP-RSTIAAAFSPDGKTLASTHG---DHTVKIIDCQT---GSCLKVL 145 (768)
Q Consensus 77 ~~d~g~~LvSgs~-DgsIrlWd~~t~---~L~gH~-~~VtslafSPDG~~LaSgS~---DgtVrVWDl~t---g~~l~~l 145 (768)
...+++.|+..+. |+++++|++..+ ++..|. ..+..++|||| +++++++. +...++|.++. +... .+
T Consensus 29 ~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l 106 (582)
T 3o4h_A 29 GVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RL 106 (582)
T ss_dssp EEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-EC
T ss_pred cCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cc
Confidence 3457778887776 999999998765 455666 68999999999 78887765 45455554432 3323 44
Q ss_pred ecCCCCcEEEEEccCCCC-EEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEECC-----eEEEEEc
Q 004203 146 HGHRRTPWVVRFHPLNPT-IIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH-----KLYIWRY 219 (768)
Q Consensus 146 ~gH~g~V~sVafSP~dg~-lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSdd-----~I~IWDl 219 (768)
.... .+...+|+| +++ ++++...++.+.|||+.+++......+.. .+++|+|||++|++++.+ .|++||+
T Consensus 107 ~~~~-~~~~~~~s~-dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~ 182 (582)
T 3o4h_A 107 EAVK-PMRILSGVD-TGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNL 182 (582)
T ss_dssp TTSC-SBEEEEEEE-CSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEET
T ss_pred cCCC-CceeeeeCC-CCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcC
Confidence 3332 355678999 554 44444444455699999998776665544 889999999999977743 3999999
Q ss_pred CCCccccCCeEeecCCCCeEEEEEccCCCeEEE
Q 004203 220 NMREETSSPRIVLRTRRSLRAVHFHPHAAPLLL 252 (768)
Q Consensus 220 ~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~Lla 252 (768)
.+++. ..+..+...+..++|||||++|+.
T Consensus 183 ~~g~~----~~l~~~~~~~~~~~~SpDG~~l~~ 211 (582)
T 3o4h_A 183 SSGGL----RVFDSGEGSFSSASISPGMKVTAG 211 (582)
T ss_dssp TTCCC----EEECCSSCEEEEEEECTTSCEEEE
T ss_pred CCCCc----eEeecCCCccccceECCCCCEEEE
Confidence 88764 246677888999999999998873
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.49 E-value=1.9e-12 Score=137.86 Aligned_cols=216 Identities=12% Similarity=0.073 Sum_probs=143.3
Q ss_pred CCCCCCCeEE-----EEECCCCCEEEEEeC-CC--eEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeE
Q 004203 103 LSPPPRSTIA-----AAFSPDGKTLASTHG-DH--TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEV 174 (768)
Q Consensus 103 L~gH~~~Vts-----lafSPDG~~LaSgS~-Dg--tVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtV 174 (768)
+..|...... .+|||||++|+.++. ++ .|++||+++++......++...+..+.|+| |++.|++++.++.|
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp-dg~~l~~~~~~~~l 104 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP-DDDALFYVKDGRNL 104 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT-TSSEEEEEETTTEE
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC-CCCEEEEEeCCCeE
Confidence 4556655555 889999999999887 66 499999999998877777776666678999 99999999999999
Q ss_pred EEEECCCCcEEEEecCCC-CeEEE--EEcCCCCEEEEEE-----------------------CCeEEEEEcCCCccccCC
Q 004203 175 RLWNASTAECIGSRDFYR-PIASI--AFHASGELLAVAS-----------------------GHKLYIWRYNMREETSSP 228 (768)
Q Consensus 175 rLWDl~sg~~i~~l~h~~-~V~sv--afSPDG~~LatgS-----------------------dd~I~IWDl~t~~~~~~~ 228 (768)
++||+.+++....+.... .+... .++||+++++... +..|++||+.+++..
T Consensus 105 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~--- 181 (388)
T 3pe7_A 105 MRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST--- 181 (388)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE---
T ss_pred EEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE---
Confidence 999999998876655433 33333 3489999887432 134999999887542
Q ss_pred eEeecCCCCeEEEEEcc-CCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCce
Q 004203 229 RIVLRTRRSLRAVHFHP-HAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFL 307 (768)
Q Consensus 229 ~~l~~h~~~V~sVaFSP-DG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil 307 (768)
.+..+...+..+.|+| ||+.|++..... -... ...+.+.+........+..... ...+.
T Consensus 182 -~l~~~~~~~~~~~~sp~dg~~l~~~~~~~-~~~~----------------~~~l~~~d~~~~~~~~l~~~~~--~~~~~ 241 (388)
T 3pe7_A 182 -VILQENQWLGHPIYRPYDDSTVAFCHEGP-HDLV----------------DARMWLINEDGTNMRKVKTHAE--GESCT 241 (388)
T ss_dssp -EEEEESSCEEEEEEETTEEEEEEEEECSC-TTTS----------------SCSEEEEETTSCCCEESCCCCT--TEEEE
T ss_pred -EeecCCccccccEECCCCCCEEEEEEecC-CCCC----------------cceEEEEeCCCCceEEeeeCCC--Ccccc
Confidence 3556677899999999 999887776411 0000 1123333332222222211100 01234
Q ss_pred EEEEecCCCEEEEEecCCCCC-cceEEeccCCCcee
Q 004203 308 RPSFVRDDERISLQHTEHDSG-ATRTQQSLRSSSSV 342 (768)
Q Consensus 308 ~psFSpDG~rIv~~~~d~~~G-s~~~~~~~~ss~~~ 342 (768)
.|.|||||++|++........ ..++..+..+...+
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR 277 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCCCceE
Confidence 789999999998864432211 12555555544433
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.46 E-value=1.5e-12 Score=135.65 Aligned_cols=167 Identities=13% Similarity=0.117 Sum_probs=121.3
Q ss_pred ecCCCE-EEEEeCCCeEEEEeCCCCCC----C-CC-----CCCeEEEEECCCCCEEEEEeCC------------CeEEEE
Q 004203 78 RDARRG-LASWVEAESLHHLRPKYCPL----S-PP-----PRSTIAAAFSPDGKTLASTHGD------------HTVKII 134 (768)
Q Consensus 78 ~d~g~~-LvSgs~DgsIrlWd~~t~~L----~-gH-----~~~VtslafSPDG~~LaSgS~D------------gtVrVW 134 (768)
..+++. +++...++.|.+||..+++. . .+ ...+.+++|+|||++|++++.+ +.|++|
T Consensus 51 s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~ 130 (349)
T 1jmx_B 51 APDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVF 130 (349)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEE
T ss_pred CCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEE
Confidence 344554 45556788999999987632 1 22 2337899999999999999865 899999
Q ss_pred eCCCCe---EEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-------------------
Q 004203 135 DCQTGS---CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYR------------------- 192 (768)
Q Consensus 135 Dl~tg~---~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~------------------- 192 (768)
|+++++ .+..+..+. .+.+++|+| +++ ++.++ +.|++||+.+++.+..+....
T Consensus 131 d~~~~~~~~~~~~~~~~~-~~~~~~~s~-dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (349)
T 1jmx_B 131 STADGLEAKPVRTFPMPR-QVYLMRAAD-DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQS 205 (349)
T ss_dssp EGGGGGGBCCSEEEECCS-SCCCEEECT-TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCC
T ss_pred ECCCccccceeeeccCCC-cccceeECC-CCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCC
Confidence 998854 334555443 588899999 777 44444 349999999988776653221
Q ss_pred --------------------------------------------------CeEEEEEcC-CCCEEEEEECCeEEEEEcCC
Q 004203 193 --------------------------------------------------PIASIAFHA-SGELLAVASGHKLYIWRYNM 221 (768)
Q Consensus 193 --------------------------------------------------~V~svafSP-DG~~LatgSdd~I~IWDl~t 221 (768)
.+..++|+| ||++|+++ ++.|++||+.+
T Consensus 206 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~ 284 (349)
T 1jmx_B 206 PRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQ 284 (349)
T ss_dssp TTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTT
T ss_pred cceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECcc
Confidence 345677889 99999988 77799999988
Q ss_pred CccccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
++... .......+.+++|+|||++|++++
T Consensus 285 ~~~~~----~~~~~~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 285 RKLIK----AANLDHTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp TEEEE----EEECSSCCCEEEECSSSSCEEEES
T ss_pred CeEEE----EEcCCCCccceEECCCCCEEEEec
Confidence 76533 222345678999999999888754
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.44 E-value=2e-11 Score=129.60 Aligned_cols=175 Identities=11% Similarity=0.126 Sum_probs=118.4
Q ss_pred EecCCCEEEEEeCC----CeEEEEeCCC--CC------CCCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCCCCeEEE
Q 004203 77 GRDARRGLASWVEA----ESLHHLRPKY--CP------LSPPPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQTGSCLK 143 (768)
Q Consensus 77 ~~d~g~~LvSgs~D----gsIrlWd~~t--~~------L~gH~~~VtslafSPDG~~LaSgS-~DgtVrVWDl~tg~~l~ 143 (768)
...+++.|++.+.+ +.|.+|++.. ++ +..+......+++ |+++|++++ .++.|.+|++.+...+.
T Consensus 57 ~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~ 134 (361)
T 3scy_A 57 PSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALL 134 (361)
T ss_dssp ECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBC
T ss_pred ECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCc
Confidence 34566777777765 7899998764 32 2235567788888 888888777 58899999997543221
Q ss_pred ----EE--ecC--------CCCcEEEEEccCCCCEEEEEe-CCCeEEEEECCCCc-------E-------EEEecCCCCe
Q 004203 144 ----VL--HGH--------RRTPWVVRFHPLNPTIIASGS-LDHEVRLWNASTAE-------C-------IGSRDFYRPI 194 (768)
Q Consensus 144 ----~l--~gH--------~g~V~sVafSP~dg~lLaSgS-~DgtVrLWDl~sg~-------~-------i~~l~h~~~V 194 (768)
.+ .+. ...+.+++|+| ++++++.++ .++.|++|++.... . ..........
T Consensus 135 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 213 (361)
T 3scy_A 135 PASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGP 213 (361)
T ss_dssp SCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCE
T ss_pred ccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCC
Confidence 11 111 22347899999 887655544 58899999887543 1 2223445677
Q ss_pred EEEEEcCCCCEEEEEE--CCeEEEEEcCCCccccCCeEe---ecCCCCeEEEEEccCCCeEEEEEe
Q 004203 195 ASIAFHASGELLAVAS--GHKLYIWRYNMREETSSPRIV---LRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 195 ~svafSPDG~~LatgS--dd~I~IWDl~t~~~~~~~~~l---~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
..++|+|||++|++++ ++.|.+||+.++.... ...+ ..+...+..++|+|||++|+++..
T Consensus 214 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~-~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 214 RHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDE-IQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp EEEEECTTSSEEEEEETTTCEEEEEEEETTEEEE-EEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred eEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEE-eEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 8999999999988887 4559999998664321 1111 123355789999999998876653
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.43 E-value=6.4e-12 Score=135.02 Aligned_cols=179 Identities=12% Similarity=0.055 Sum_probs=123.2
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCC-CCCCC---CCC--CCeEEEEECCCCCE--EEEEe-------------CCCeEEE
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPK-YCPLS---PPP--RSTIAAAFSPDGKT--LASTH-------------GDHTVKI 133 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~-t~~L~---gH~--~~VtslafSPDG~~--LaSgS-------------~DgtVrV 133 (768)
.+...+++.|++.+.+ .|.+|++. ++++. .+. +.+..++|+|||++ ++++. .++++++
T Consensus 45 ~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 45 MTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence 4445567778888777 89999986 54321 111 23566899999994 45553 6899999
Q ss_pred EeCC-CCeEEEEEe----cCCCCcEEEEEccCCCCEEEEEeC-CCeEEEEECC-CCcEEE--Eec---CCCCeEEEEEcC
Q 004203 134 IDCQ-TGSCLKVLH----GHRRTPWVVRFHPLNPTIIASGSL-DHEVRLWNAS-TAECIG--SRD---FYRPIASIAFHA 201 (768)
Q Consensus 134 WDl~-tg~~l~~l~----gH~g~V~sVafSP~dg~lLaSgS~-DgtVrLWDl~-sg~~i~--~l~---h~~~V~svafSP 201 (768)
|+++ +++....+. .+...+..++|+| ++++++++.. ++.|++||+. +++... .+. +...+..++|+|
T Consensus 124 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp 202 (365)
T 1jof_A 124 FSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP 202 (365)
T ss_dssp EEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT
T ss_pred EccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC
Confidence 9997 466554443 2456789999999 8887777654 6799999998 776532 232 356789999999
Q ss_pred CCCEEEEEEC--CeEEEEEcCC--CccccCCeEee-------cCCC------CeEEEE-EccCCCeEEEEEe
Q 004203 202 SGELLAVASG--HKLYIWRYNM--REETSSPRIVL-------RTRR------SLRAVH-FHPHAAPLLLTAE 255 (768)
Q Consensus 202 DG~~LatgSd--d~I~IWDl~t--~~~~~~~~~l~-------~h~~------~V~sVa-FSPDG~~LlaS~s 255 (768)
||++|++++. +.|.+|+++. ++.......+. ++.. .+..++ |+|||++|+++..
T Consensus 203 dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 203 TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 9999988873 4599998864 33210000111 1122 588999 9999998876654
No 164
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.43 E-value=1.7e-11 Score=130.25 Aligned_cols=173 Identities=13% Similarity=0.094 Sum_probs=119.0
Q ss_pred CCCEEEEEe-CCCeEEEEeCCCC-CCC-----------------CCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCCCC
Q 004203 80 ARRGLASWV-EAESLHHLRPKYC-PLS-----------------PPPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQTG 139 (768)
Q Consensus 80 ~g~~LvSgs-~DgsIrlWd~~t~-~L~-----------------gH~~~VtslafSPDG~~LaSgS-~DgtVrVWDl~tg 139 (768)
+++.|+... .++.|.+|++... .+. .+...+.+++|+|||++|++++ .++.|++|+++..
T Consensus 108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~ 187 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPN 187 (361)
T ss_dssp CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence 445555444 6889999998643 111 1223468899999999776655 4889999988754
Q ss_pred e-------E------EEEEecCCCCcEEEEEccCCCCEEEEEe-CCCeEEEEECCCCcEEEE--ec----CCCCeEEEEE
Q 004203 140 S-------C------LKVLHGHRRTPWVVRFHPLNPTIIASGS-LDHEVRLWNASTAECIGS--RD----FYRPIASIAF 199 (768)
Q Consensus 140 ~-------~------l~~l~gH~g~V~sVafSP~dg~lLaSgS-~DgtVrLWDl~sg~~i~~--l~----h~~~V~svaf 199 (768)
. . ......+...+..++|+| ++++++.++ .++.|++||+.+++.... +. +......++|
T Consensus 188 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~ 266 (361)
T 3scy_A 188 ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHL 266 (361)
T ss_dssp CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEE
T ss_pred CCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEE
Confidence 3 1 122233455688999999 888777766 689999999998765322 21 2345679999
Q ss_pred cCCCCEEEEEECC---eEEEEEcCC--CccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 200 HASGELLAVASGH---KLYIWRYNM--REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 200 SPDG~~LatgSdd---~I~IWDl~t--~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
+|||++|+++..+ .|.+|+++. ++... ...+. ....++.++|+|||++|+++..
T Consensus 267 spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~-~~~~~-~g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 267 SPDGKYLYASNRLKADGVAIFKVDETNGTLTK-VGYQL-TGIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp CTTSSEEEEEECSSSCEEEEEEECTTTCCEEE-EEEEE-CSSCCCEEEECTTSCEEEEEET
T ss_pred CCCCCEEEEECCCCCCEEEEEEEcCCCCcEEE-eeEec-CCCCCceEEECCCCCEEEEEEC
Confidence 9999999877643 499999963 33211 11222 2567889999999998887763
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.40 E-value=7.3e-12 Score=132.99 Aligned_cols=160 Identities=8% Similarity=0.006 Sum_probs=114.5
Q ss_pred CeEEEEeCCCC---CCCCCCCC-eEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEE------------
Q 004203 91 ESLHHLRPKYC---PLSPPPRS-TIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV------------ 154 (768)
Q Consensus 91 gsIrlWd~~t~---~L~gH~~~-VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~s------------ 154 (768)
..|.+|+..++ ++..+... ...+.|+|||++|+..+.++.|++||+.+++....+..+......
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 139 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKL 139 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEE
T ss_pred ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCcc
Confidence 36777887765 23333333 334789999999999999999999999999877666655542222
Q ss_pred -------EEEccCCCCEEEEE-----eCCCeEEEEECCCCcEEEEecCCCCeEEEEEcC-CCCEEEEEEC-------CeE
Q 004203 155 -------VRFHPLNPTIIASG-----SLDHEVRLWNASTAECIGSRDFYRPIASIAFHA-SGELLAVASG-------HKL 214 (768)
Q Consensus 155 -------VafSP~dg~lLaSg-----S~DgtVrLWDl~sg~~i~~l~h~~~V~svafSP-DG~~LatgSd-------d~I 214 (768)
+.|+| +++.++.. ..+..|++||+.+++......+...+..+.|+| +++.|++.++ ..|
T Consensus 140 ~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l 218 (396)
T 3c5m_A 140 VGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARM 218 (396)
T ss_dssp EEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCC
T ss_pred ccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceE
Confidence 24566 55555443 356689999999998877777778899999999 8887877763 248
Q ss_pred EEEEcCCCccccCCeEeecC--CCCeEEEEEccCCCeEEEEEe
Q 004203 215 YIWRYNMREETSSPRIVLRT--RRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 215 ~IWDl~t~~~~~~~~~l~~h--~~~V~sVaFSPDG~~LlaS~s 255 (768)
++||+..++.. .+..+ ...+..+.|+|||++|++.+.
T Consensus 219 ~~~d~~~~~~~----~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 219 WLVNEDGSNVR----KIKEHAEGESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp EEEETTSCCCE----ESSCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred EEEECCCCcee----EeeccCCCccccceEECCCCCEEEEEec
Confidence 88888665422 22222 235888999999998887754
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.40 E-value=6.3e-12 Score=144.79 Aligned_cols=236 Identities=11% Similarity=0.037 Sum_probs=147.4
Q ss_pred cCCCE-EEEEe-CCCeEEEEeCC--C-C---CCCC-----CCCCeEEEEECCCCCEEEEEeCC----------CeEEEEe
Q 004203 79 DARRG-LASWV-EAESLHHLRPK--Y-C---PLSP-----PPRSTIAAAFSPDGKTLASTHGD----------HTVKIID 135 (768)
Q Consensus 79 d~g~~-LvSgs-~DgsIrlWd~~--t-~---~L~g-----H~~~VtslafSPDG~~LaSgS~D----------gtVrVWD 135 (768)
.+++. |+... .+..|.+|+.. . + ++.. |...+.+++|||||++|++++.| .+|++||
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 34555 44333 35667777776 2 3 3555 67789999999999999999887 6899999
Q ss_pred CCC------CeEEEEEe-cCCCCcEEEEEccCCCCEEEEEeCC--------CeEEEEECC-CC---cEEEEec-CCCCeE
Q 004203 136 CQT------GSCLKVLH-GHRRTPWVVRFHPLNPTIIASGSLD--------HEVRLWNAS-TA---ECIGSRD-FYRPIA 195 (768)
Q Consensus 136 l~t------g~~l~~l~-gH~g~V~sVafSP~dg~lLaSgS~D--------gtVrLWDl~-sg---~~i~~l~-h~~~V~ 195 (768)
+.+ ++. ..+. .+...+..++||| |+++|++++.+ ..|++||+. ++ +...... +...+.
T Consensus 168 ~~~~~~~~~~~~-~~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~ 245 (662)
T 3azo_A 168 LDGSAAADRSAV-RELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIA 245 (662)
T ss_dssp TTSTTTTCGGGS-EESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEE
T ss_pred CCCCccccCCce-eEEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEc
Confidence 988 554 4454 5556677889999 99999887755 379999999 57 4444444 467899
Q ss_pred EEEEcCCCCEEEEEEC-C--eEEEEEcCCCccccCCeEeecCCC---------CeEEEEEccCCCeEEEEEeeCCcCCCC
Q 004203 196 SIAFHASGELLAVASG-H--KLYIWRYNMREETSSPRIVLRTRR---------SLRAVHFHPHAAPLLLTAEVNDLDSSE 263 (768)
Q Consensus 196 svafSPDG~~LatgSd-d--~I~IWDl~t~~~~~~~~~l~~h~~---------~V~sVaFSPDG~~LlaS~svwdl~sg~ 263 (768)
.++|+|||++++++.. + +|++||+.+++... +..+.. .+..++|+|+++.++++.. ...
T Consensus 246 ~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~----l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~---- 316 (662)
T 3azo_A 246 QAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQ----LCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAA---- 316 (662)
T ss_dssp EEEECTTSCEEEEECTTSSCEEEEECTTTCCEEE----SSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSC----
T ss_pred ceEECCCCeEEEEECCCCCeEEEEEECCCCceee----cccccccccCccccccCceEeEeCCCEEEEEEEc-Ccc----
Confidence 9999999996655553 3 37777765554322 222211 1567899999985554432 110
Q ss_pred cceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceEEEE-ecCCCEEEEEecCCCCCcceEEeccCCCcee
Q 004203 264 SSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSF-VRDDERISLQHTEHDSGATRTQQSLRSSSSV 342 (768)
Q Consensus 264 ~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psF-SpDG~rIv~~~~d~~~Gs~~~~~~~~ss~~~ 342 (768)
.+...+...+....+... .. ....+ ++|++.+++...+.+.....+..+..+...+
T Consensus 317 -----------------~l~~~d~~~~~~~~l~~~-----~~-~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 317 -----------------VLGILDPESGELVDAAGP-----WT-EWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp -----------------EEEEEETTTTEEEECCSS-----CC-EEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred -----------------EEEEEECCCCcEEEecCC-----CC-eEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence 111111111110000000 01 12233 7889999888776666666777776666655
Q ss_pred eeeccc
Q 004203 343 RLLTYS 348 (768)
Q Consensus 343 rl~~~~ 348 (768)
+++...
T Consensus 374 ~l~~~~ 379 (662)
T 3azo_A 374 TIGARH 379 (662)
T ss_dssp EEESCC
T ss_pred EeecCC
Confidence 554433
No 167
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.38 E-value=2.5e-12 Score=146.44 Aligned_cols=166 Identities=9% Similarity=-0.003 Sum_probs=124.4
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCC----CeEEEEeCCCCeEEEEEecCC
Q 004203 77 GRDARRGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGD----HTVKIIDCQTGSCLKVLHGHR 149 (768)
Q Consensus 77 ~~d~g~~LvSgs~DgsIrlWd~~t~~---L~gH~~~VtslafSPDG~~LaSgS~D----gtVrVWDl~tg~~l~~l~gH~ 149 (768)
..+++..++....++.+.+||+.+++ +..+.. .+++|||||++|++++.| ..|++||+++++.. .+.+|.
T Consensus 118 s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~ 194 (582)
T 3o4h_A 118 VDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGE 194 (582)
T ss_dssp EECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSS
T ss_pred CCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCC
Confidence 33444444444444455599998763 333333 789999999999988887 88999999988854 667888
Q ss_pred CCcEEEEEccCCCCEEEEEeCCC--eEEEEECCCCcEEEEecCCCCeEEEE--------EcCCCCEEEEEE-CCeEEEEE
Q 004203 150 RTPWVVRFHPLNPTIIASGSLDH--EVRLWNASTAECIGSRDFYRPIASIA--------FHASGELLAVAS-GHKLYIWR 218 (768)
Q Consensus 150 g~V~sVafSP~dg~lLaSgS~Dg--tVrLWDl~sg~~i~~l~h~~~V~sva--------fSPDG~~LatgS-dd~I~IWD 218 (768)
+.+..++|+| ||+.|+++..++ .|++||+.+++......+...+..++ |+|||.++++++ ++.+++|+
T Consensus 195 ~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 195 GSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI 273 (582)
T ss_dssp CEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE
T ss_pred CccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEE
Confidence 8899999999 999999888888 89999999998873234555566666 999998777777 55699999
Q ss_pred cCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 219 YNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 219 l~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
+ ++... .....|.+++|+ ||+.+++.+.
T Consensus 274 ~--g~~~~------~~~~~v~~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 274 D--GERVE------APQGNHGRVVLW-RGKLVTSHTS 301 (582)
T ss_dssp T--TEEEC------CCSSEEEEEEEE-TTEEEEEEEE
T ss_pred E--CCeec------cCCCceEEEEec-CCEEEEEEcC
Confidence 9 43211 234678999999 9887665543
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.37 E-value=2.1e-11 Score=140.49 Aligned_cols=172 Identities=13% Similarity=0.054 Sum_probs=121.8
Q ss_pred CCEEEEE--eCCCeEEEEeCCC-C---CCCCCCCCeE---------EEEEC--CCCCE-EEEEeC-CCeEEEEeCC--C-
Q 004203 81 RRGLASW--VEAESLHHLRPKY-C---PLSPPPRSTI---------AAAFS--PDGKT-LASTHG-DHTVKIIDCQ--T- 138 (768)
Q Consensus 81 g~~LvSg--s~DgsIrlWd~~t-~---~L~gH~~~Vt---------slafS--PDG~~-LaSgS~-DgtVrVWDl~--t- 138 (768)
+..+++. ..++...+|.... + ++..|...+. ...|+ |||++ |+..+. +..|++||+. +
T Consensus 35 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~ 114 (662)
T 3azo_A 35 EVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGG 114 (662)
T ss_dssp EEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTC
T ss_pred eEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCC
Confidence 3334444 4467788887532 2 4666776666 66665 99998 776655 6678888876 3
Q ss_pred CeEEEEEec-----CCCCcEEEEEccCCCCEEEEEeCC----------CeEEEEECCC------CcEEEEe-cCCCCeEE
Q 004203 139 GSCLKVLHG-----HRRTPWVVRFHPLNPTIIASGSLD----------HEVRLWNAST------AECIGSR-DFYRPIAS 196 (768)
Q Consensus 139 g~~l~~l~g-----H~g~V~sVafSP~dg~lLaSgS~D----------gtVrLWDl~s------g~~i~~l-~h~~~V~s 196 (768)
++ ...+.. |...+..++|+| |++.|++++.| .+|++||+.+ ++..... .+...+..
T Consensus 115 ~~-~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 192 (662)
T 3azo_A 115 AV-PRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTG 192 (662)
T ss_dssp CC-CEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECC
T ss_pred CC-CEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccC
Confidence 44 455555 566788999999 99999988877 5899999998 6666555 55667888
Q ss_pred EEEcCCCCEEEEEE-CC--------eEEEEEcC-CCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 197 IAFHASGELLAVAS-GH--------KLYIWRYN-MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 197 vafSPDG~~LatgS-dd--------~I~IWDl~-t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
++|+|||++|++.+ ++ .|++||+. ++...........+...+..+.|+|||+ +++++.
T Consensus 193 ~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~ 260 (662)
T 3azo_A 193 PRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATD 260 (662)
T ss_dssp CEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEEC
T ss_pred ceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEEC
Confidence 99999999998877 32 39999998 4521111112334568899999999999 555554
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.34 E-value=6.2e-11 Score=127.31 Aligned_cols=146 Identities=14% Similarity=0.072 Sum_probs=106.3
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeEEEEEecC-CCCcEEEEEccCCCCE--EEEEe------------
Q 004203 106 PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQ-TGSCLKVLHGH-RRTPWVVRFHPLNPTI--IASGS------------ 169 (768)
Q Consensus 106 H~~~VtslafSPDG~~LaSgS~DgtVrVWDl~-tg~~l~~l~gH-~g~V~sVafSP~dg~l--LaSgS------------ 169 (768)
....+..++|+|||++|++++.+ .|.+||++ +++........ .+.+..++|+| ++++ ++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT-NTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC-CCCEEEEEEecCCcceeccceee
Confidence 33468899999999999999988 99999997 78765443311 13366689999 8874 44543
Q ss_pred -CCCeEEEEECC-CCcEEEEec-----CCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcC-CCccccCCeEee--cCCCC
Q 004203 170 -LDHEVRLWNAS-TAECIGSRD-----FYRPIASIAFHASGELLAVAS--GHKLYIWRYN-MREETSSPRIVL--RTRRS 237 (768)
Q Consensus 170 -~DgtVrLWDl~-sg~~i~~l~-----h~~~V~svafSPDG~~LatgS--dd~I~IWDl~-t~~~~~~~~~l~--~h~~~ 237 (768)
.++++.+|++. +++....+. +...+..++|+|||++|+++. ++.|++||++ +++... ...+. .+...
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~g~~ 194 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL-VGSVDAPDPGDH 194 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE-EEEEECSSTTCC
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEE-eeeEecCCCCCC
Confidence 68999999997 466544332 456789999999999988876 3569999998 554321 11121 23567
Q ss_pred eEEEEEccCCCeEEEEE
Q 004203 238 LRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 238 V~sVaFSPDG~~LlaS~ 254 (768)
++.++|+|||++++++.
T Consensus 195 p~~~~~spdg~~l~v~~ 211 (365)
T 1jof_A 195 PRWVAMHPTGNYLYALM 211 (365)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred CCEeEECCCCCEEEEEE
Confidence 99999999999877665
No 170
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.32 E-value=2.4e-10 Score=134.03 Aligned_cols=237 Identities=10% Similarity=0.001 Sum_probs=151.0
Q ss_pred EecCCCEEEEEeCCC-----eEEEEeCCCCCCC---CCCCCeEEEEECCCCCEEEEEeCCCe----------------EE
Q 004203 77 GRDARRGLASWVEAE-----SLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLASTHGDHT----------------VK 132 (768)
Q Consensus 77 ~~d~g~~LvSgs~Dg-----sIrlWd~~t~~L~---gH~~~VtslafSPDG~~LaSgS~Dgt----------------Vr 132 (768)
.+.+++.|+....++ .|++||+.+++.. .....+..++|+|||+.|+.++.+.. |+
T Consensus 132 ~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~ 211 (710)
T 2xdw_A 132 FSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLY 211 (710)
T ss_dssp ECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEE
T ss_pred ECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEE
Confidence 345666666444332 8999999887422 11223678999999999999988766 99
Q ss_pred EEeCCCCeE--EEEEec--CCCCcEEEEEccCCCCEEEEEeC-----CCeEEEEECCC------C--cEEEEecCCCCeE
Q 004203 133 IIDCQTGSC--LKVLHG--HRRTPWVVRFHPLNPTIIASGSL-----DHEVRLWNAST------A--ECIGSRDFYRPIA 195 (768)
Q Consensus 133 VWDl~tg~~--l~~l~g--H~g~V~sVafSP~dg~lLaSgS~-----DgtVrLWDl~s------g--~~i~~l~h~~~V~ 195 (768)
+|++.+++. ...+.. |...+..+.|+| |+++|+..+. +..|++||+.+ + +......+...+.
T Consensus 212 ~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~ 290 (710)
T 2xdw_A 212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY 290 (710)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE
T ss_pred EEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE
Confidence 999988763 233333 445577899999 8888877664 56899999987 5 3333444555554
Q ss_pred EEEEcCCCCEEEEEEC-C----eEEEEEcCCCccccCCeEeecCCC--CeEEEEEccCCCeEEEEEeeCCcCCCCcceeE
Q 004203 196 SIAFHASGELLAVASG-H----KLYIWRYNMREETSSPRIVLRTRR--SLRAVHFHPHAAPLLLTAEVNDLDSSESSLTL 268 (768)
Q Consensus 196 svafSPDG~~LatgSd-d----~I~IWDl~t~~~~~~~~~l~~h~~--~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L 268 (768)
. .|+|+|+.|++.++ + +|.+||+.++.... ...+..+.. .+..+.|++++. ++++.......
T Consensus 291 ~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~~g~~-------- 359 (710)
T 2xdw_A 291 D-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESK-WKVLVPEHEKDVLEWVACVRSNF-LVLCYLHDVKN-------- 359 (710)
T ss_dssp E-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGG-CEEEECCCSSCEEEEEEEETTTE-EEEEEEETTEE--------
T ss_pred E-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccc-ceeccCCCCCCeEEEEEEEcCCE-EEEEEEECCEE--------
Confidence 4 58999998887774 2 39999998764211 223444433 688899996655 55554322110
Q ss_pred eecCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecCCCCCcceEEeccCCCc
Q 004203 269 ATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSS 340 (768)
Q Consensus 269 ~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d~~~Gs~~~~~~~~ss~ 340 (768)
.+.+++...+........ ....+...++++|++.+++...+...+...+..+..+..
T Consensus 360 ------------~l~~~~~~~g~~~~~l~~---~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 360 ------------TLQLHDLATGALLKIFPL---EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ------------EEEEEETTTCCEEEEECC---CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ------------EEEEEECCCCCEEEecCC---CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 112222111110000000 011233578899999999998888888888888886655
No 171
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.27 E-value=3.1e-10 Score=132.93 Aligned_cols=239 Identities=11% Similarity=-0.011 Sum_probs=151.3
Q ss_pred EecCCCEEE-----EEeCCCeEEEEeCCCCCCC--CCCCCe--EEEEECCCCCEEEEEeCCCe-------------EEEE
Q 004203 77 GRDARRGLA-----SWVEAESLHHLRPKYCPLS--PPPRST--IAAAFSPDGKTLASTHGDHT-------------VKII 134 (768)
Q Consensus 77 ~~d~g~~Lv-----Sgs~DgsIrlWd~~t~~L~--gH~~~V--tslafSPDG~~LaSgS~Dgt-------------VrVW 134 (768)
.+.+++.|+ +++++..|++||+.++++. .+...+ ..++|+|||+.|+.++.|.. |++|
T Consensus 128 ~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~ 207 (695)
T 2bkl_A 128 VSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYH 207 (695)
T ss_dssp ECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEE
T ss_pred ECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEE
Confidence 345666665 3445578999999988543 233333 78999999999999998776 9999
Q ss_pred eCCCCeE--EEEEe--cCCCCcEEEEEccCCCCEEEEEeCCC----eEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEE
Q 004203 135 DCQTGSC--LKVLH--GHRRTPWVVRFHPLNPTIIASGSLDH----EVRLWNASTAECIGSRDFYRPIASIAFHASGELL 206 (768)
Q Consensus 135 Dl~tg~~--l~~l~--gH~g~V~sVafSP~dg~lLaSgS~Dg----tVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~L 206 (768)
++.+++. ...+. .|...+..+.|+| |+++|+.++.++ .|++||..+++......+...+....| ++|+ |
T Consensus 208 ~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l 284 (695)
T 2bkl_A 208 TLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-F 284 (695)
T ss_dssp ETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-E
T ss_pred ECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-E
Confidence 9998762 23333 3556788999999 888887777665 788888777766665666666666667 6777 6
Q ss_pred EEEEC-----CeEEEEEcCCCccccCCeEeecC--CCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCC
Q 004203 207 AVASG-----HKLYIWRYNMREETSSPRIVLRT--RRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPP 279 (768)
Q Consensus 207 atgSd-----d~I~IWDl~t~~~~~~~~~l~~h--~~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~ 279 (768)
++.++ .+|.+||+.+++... ...+..+ ...+..+.|+ ++. ++++...+...
T Consensus 285 ~~~s~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~l~~~~~~-~~~-lv~~~~~dg~~------------------- 342 (695)
T 2bkl_A 285 YVLTDEGAPRQRVFEVDPAKPARAS-WKEIVPEDSSASLLSVSIV-GGH-LSLEYLKDATS------------------- 342 (695)
T ss_dssp EEEECTTCTTCEEEEEBTTBCSGGG-CEEEECCCSSCEEEEEEEE-TTE-EEEEEEETTEE-------------------
T ss_pred EEEECCCCCCCEEEEEeCCCCCccC-CeEEecCCCCCeEEEEEEE-CCE-EEEEEEECCEE-------------------
Confidence 55553 349999997764311 1233333 4568888988 444 55554322110
Q ss_pred CeEEEecCCCCCCCCcccccCCC-CCCceEEEEecCCCEEEEEecCCCCCcceEEeccCCCceeeee
Q 004203 280 PVICMAGAHSSSHPGLAEEVPLI-TPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLL 345 (768)
Q Consensus 280 ~~V~l~d~~s~d~~~L~~~~~~~-slpil~psFSpDG~rIv~~~~d~~~Gs~~~~~~~~ss~~~rl~ 345 (768)
.+.+.+.. +.. + ...... ...+...+|++|++.+++...+...+...+..+..+...+.|.
T Consensus 343 -~l~~~~~~-g~~--~-~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 343 -EVRVATLK-GKP--V-RTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp -EEEEEETT-CCE--E-EECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred -EEEEEeCC-CCe--e-EEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 01111100 000 0 000000 0112256788999999998888888888888888766655444
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.25 E-value=4.8e-11 Score=126.63 Aligned_cols=142 Identities=10% Similarity=0.030 Sum_probs=102.4
Q ss_pred CCeEEEEECCCCCEEEEEeCC---CeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcE
Q 004203 108 RSTIAAAFSPDGKTLASTHGD---HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC 184 (768)
Q Consensus 108 ~~VtslafSPDG~~LaSgS~D---gtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~ 184 (768)
..+..++|||||++|+....+ ..|++||+.+++......++......+.|+| |++.|++++.++.|++||+.+++.
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIST-DERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECT-TSSEEEEEETTTEEEEEETTTCCE
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECC-CCCEEEEEEcCCcEEEEECCCCCc
Confidence 347788999999998877553 4799999999886554444333333478999 999999999999999999999887
Q ss_pred EEEecCCCC-eEE-------------------EEEcCCCCEEEEEE------CCeEEEEEcCCCccccCCeEeecCCCCe
Q 004203 185 IGSRDFYRP-IAS-------------------IAFHASGELLAVAS------GHKLYIWRYNMREETSSPRIVLRTRRSL 238 (768)
Q Consensus 185 i~~l~h~~~-V~s-------------------vafSPDG~~LatgS------dd~I~IWDl~t~~~~~~~~~l~~h~~~V 238 (768)
......... ... +.|+|+++.+++.. +..|++||+.+++.. .+..+...+
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~----~~~~~~~~~ 190 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELE----VIHQDTAWL 190 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEE----EEEEESSCE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEE----eeccCCccc
Confidence 665542222 222 35677777666542 234999999887542 244567789
Q ss_pred EEEEEcc-CCCeEEEEE
Q 004203 239 RAVHFHP-HAAPLLLTA 254 (768)
Q Consensus 239 ~sVaFSP-DG~~LlaS~ 254 (768)
..+.|+| |++.|++..
T Consensus 191 ~~~~~sp~dg~~l~~~~ 207 (396)
T 3c5m_A 191 GHPIYRPFDDSTVGFCH 207 (396)
T ss_dssp EEEEEETTEEEEEEEEE
T ss_pred ccceECCCCCCEEEEEe
Confidence 9999999 888777665
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.23 E-value=6e-09 Score=109.01 Aligned_cols=174 Identities=9% Similarity=-0.010 Sum_probs=122.3
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCCCC----CCCCCeEEEEECCCCCEEEEEeCC----CeEEEEeCCCCeEEEEEe--cC
Q 004203 79 DARRGLASWVEAESLHHLRPKYCPLS----PPPRSTIAAAFSPDGKTLASTHGD----HTVKIIDCQTGSCLKVLH--GH 148 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~~L~----gH~~~VtslafSPDG~~LaSgS~D----gtVrVWDl~tg~~l~~l~--gH 148 (768)
.++..+++...++.|.+||..++++. .+...+.+++|++||+++++...+ +.|.+||.++++....+. .+
T Consensus 54 ~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 133 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST 133 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS
T ss_pred CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc
Confidence 44555557778899999999876422 466789999999999988877766 789999998887654443 24
Q ss_pred CCCcEEEEEccCCCCEEEEEeC------CCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcC
Q 004203 149 RRTPWVVRFHPLNPTIIASGSL------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYN 220 (768)
Q Consensus 149 ~g~V~sVafSP~dg~lLaSgS~------DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgS--dd~I~IWDl~ 220 (768)
...+..+.++| +++++++... .+.|+.||..+++..........+..++|+|||+.|+++. ++.|++||++
T Consensus 134 ~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 134 AYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp CCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 45789999999 8888777654 3567777777666554444445678999999999776665 4569999996
Q ss_pred CC-ccccCC--eEeec--CCCCeEEEEEccCCCeEEEE
Q 004203 221 MR-EETSSP--RIVLR--TRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 221 t~-~~~~~~--~~l~~--h~~~V~sVaFSPDG~~LlaS 253 (768)
+. ...... ..... ....+..++++++|+.++++
T Consensus 213 ~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~ 250 (333)
T 2dg1_A 213 DDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAM 250 (333)
T ss_dssp TTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEE
T ss_pred CCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEE
Confidence 42 211100 01111 11467889999999866554
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.21 E-value=2.8e-09 Score=113.05 Aligned_cols=155 Identities=14% Similarity=0.158 Sum_probs=112.9
Q ss_pred CeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe-EEEEE---------ecCCCCcEEE
Q 004203 91 ESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS-CLKVL---------HGHRRTPWVV 155 (768)
Q Consensus 91 gsIrlWd~~t~~L-----~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~-~l~~l---------~gH~g~V~sV 155 (768)
+.|.+||..++++ .++-....+++++++|+++++...++.|++||.+... .+..+ .++...+..+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~i 148 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDV 148 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEE
Confidence 4799999887643 2455678999999999988888889999999986542 45555 2344568899
Q ss_pred EEccCCCCEEEEEe-CCCeEEEEECCCCcEEEEecCC-----------CCeEEEEEcCCCCEEEEEE--CCeEEEEEcCC
Q 004203 156 RFHPLNPTIIASGS-LDHEVRLWNASTAECIGSRDFY-----------RPIASIAFHASGELLAVAS--GHKLYIWRYNM 221 (768)
Q Consensus 156 afSP~dg~lLaSgS-~DgtVrLWDl~sg~~i~~l~h~-----------~~V~svafSPDG~~LatgS--dd~I~IWDl~t 221 (768)
+++|+++.++++.+ .++.|++|| .+++.+..+... .....++++|++..|+++. +++|++||..+
T Consensus 149 a~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~ 227 (329)
T 3fvz_A 149 AVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT 227 (329)
T ss_dssp EECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred EEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC
Confidence 99996788888876 689999999 567777666421 2378999999955455444 44599999986
Q ss_pred CccccCCeEeecCCCCeEEEEEccCCC
Q 004203 222 REETSSPRIVLRTRRSLRAVHFHPHAA 248 (768)
Q Consensus 222 ~~~~~~~~~l~~h~~~V~sVaFSPDG~ 248 (768)
++... ......+...+..++|+| +.
T Consensus 228 G~~~~-~~~~~~~~~~~~~~~~~p-g~ 252 (329)
T 3fvz_A 228 KEFVR-EIKHASFGRNVFAISYIP-GF 252 (329)
T ss_dssp CCEEE-EECCTTTTTCEEEEEEET-TE
T ss_pred CcEEE-EEeccccCCCcceeeecC-CE
Confidence 65433 111123556789999999 54
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.19 E-value=1.3e-09 Score=114.39 Aligned_cols=153 Identities=15% Similarity=0.176 Sum_probs=107.0
Q ss_pred CCeEEEEeCCCCCCCCCCCCeEEEEECCCCCEEEEEeCC---C--eEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCE
Q 004203 90 AESLHHLRPKYCPLSPPPRSTIAAAFSPDGKTLASTHGD---H--TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTI 164 (768)
Q Consensus 90 DgsIrlWd~~t~~L~gH~~~VtslafSPDG~~LaSgS~D---g--tVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~l 164 (768)
+..|.+|+..+++...- ..+..+.|||||++|+..+.+ + .|++||+.+++.......+ . +..+.|+| |++.
T Consensus 42 ~~~l~~~d~~~~~~~~l-~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wsp-dg~~ 117 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNE-DSRK 117 (347)
T ss_dssp EEEEEEEETTTCCEEEE-ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECT-TSSE
T ss_pred cceEEEEeCCCCceEEc-ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECC-CCCE
Confidence 56788888876632111 568899999999999988754 2 4888899988876655544 3 89999999 8888
Q ss_pred EEEEeCC---------------------------CeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEECC-----
Q 004203 165 IASGSLD---------------------------HEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH----- 212 (768)
Q Consensus 165 LaSgS~D---------------------------gtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSdd----- 212 (768)
|++++.+ ..|++||+.+++.+..+... .+..++|+||| +++++..+
T Consensus 118 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~ 195 (347)
T 2gop_A 118 LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQ 195 (347)
T ss_dssp EEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCC
T ss_pred EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEeccccccc
Confidence 8877642 57999999998873333224 78899999999 77766532
Q ss_pred ---eEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 213 ---KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 213 ---~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
...||.+++++. ..+..+ ..+..+ +|||++|++.+.
T Consensus 196 ~~~~~~l~~~d~~~~----~~l~~~-~~~~~~--spdg~~l~~~~~ 234 (347)
T 2gop_A 196 YFKFWDIYIWEDGKE----EKMFEK-VSFYAV--DSDGERILLYGK 234 (347)
T ss_dssp SSCCEEEEEEETTEE----EEEEEE-ESEEEE--EECSSCEEEEEC
T ss_pred ccccccEEEeCCCce----EEeccC-cceeeE--CCCCCEEEEEEc
Confidence 334444443332 123334 455544 999998887765
No 176
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.17 E-value=3.2e-09 Score=109.77 Aligned_cols=169 Identities=13% Similarity=0.041 Sum_probs=120.5
Q ss_pred CEEEEEeCCCeEEEEeCCCC--CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecC----CCCcEEE
Q 004203 82 RGLASWVEAESLHHLRPKYC--PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH----RRTPWVV 155 (768)
Q Consensus 82 ~~LvSgs~DgsIrlWd~~t~--~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH----~g~V~sV 155 (768)
..+++...++.|..|+..++ .+..+...+.+++|+++|+++++...++.|.+||.++++........ ...++.+
T Consensus 41 ~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i 120 (296)
T 3e5z_A 41 AVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDV 120 (296)
T ss_dssp EEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCE
T ss_pred EEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCE
Confidence 36777888899999998865 23456778999999999998888777899999999888865443322 2346779
Q ss_pred EEccCCCCEEEEE----e-------------CCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEE
Q 004203 156 RFHPLNPTIIASG----S-------------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS-GHKLYIW 217 (768)
Q Consensus 156 afSP~dg~lLaSg----S-------------~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgS-dd~I~IW 217 (768)
+++| +++++++. . ..+.|+.+|.. ++.............++|+|||+.|++.+ ++.|++|
T Consensus 121 ~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~ 198 (296)
T 3e5z_A 121 CLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRY 198 (296)
T ss_dssp EECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEE
Confidence 9999 88888873 2 13467777765 55555555666778999999999984444 3569999
Q ss_pred EcC-CCcc-ccCCeEeecCCCCeEEEEEccCCCeEEEE
Q 004203 218 RYN-MREE-TSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 218 Dl~-t~~~-~~~~~~l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
|+. .+.. .. ...+..+...+..++++++|+.++++
T Consensus 199 ~~~~~g~~~~~-~~~~~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 199 CLNARGETEYQ-GVHFTVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp EECSSSCEEEE-EEEECCSSSCCCSEEEBTTSCEEEEE
T ss_pred EECCCCcCcCC-CeEeeCCCCCCCeEEECCCCCEEEEc
Confidence 997 3322 11 11222244567789999999865554
No 177
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.16 E-value=3.3e-09 Score=122.79 Aligned_cols=169 Identities=12% Similarity=0.060 Sum_probs=120.3
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC---CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC--CCeEEEEEecCCCCcEEE
Q 004203 81 RRGLASWVEAESLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQ--TGSCLKVLHGHRRTPWVV 155 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~L~---gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~--tg~~l~~l~gH~g~V~sV 155 (768)
+..+++...++.|.++|..+.++. .....+..+.|+|||+++++++.|+.|.+||+. +++.+..+... .....+
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~i 245 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSI 245 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCcee
Confidence 345667778899999999887432 233467899999999999999999999999995 88888888753 346789
Q ss_pred EEc----cCCCCEEEEEe-CCCeEEEEECCCCcEEEEecCC---------------------------------------
Q 004203 156 RFH----PLNPTIIASGS-LDHEVRLWNASTAECIGSRDFY--------------------------------------- 191 (768)
Q Consensus 156 afS----P~dg~lLaSgS-~DgtVrLWDl~sg~~i~~l~h~--------------------------------------- 191 (768)
+|+ | |+++++.+. .+++|.++|..+.+.+..+...
T Consensus 246 a~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 246 ETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp EECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEccccCC-CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 999 7 777666655 4689999999888776653210
Q ss_pred -----------------CCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCccccCCeEe---ecCCC-CeEEEEEccCCC
Q 004203 192 -----------------RPIASIAFHASGELLAVAS--GHKLYIWRYNMREETSSPRIV---LRTRR-SLRAVHFHPHAA 248 (768)
Q Consensus 192 -----------------~~V~svafSPDG~~LatgS--dd~I~IWDl~t~~~~~~~~~l---~~h~~-~V~sVaFSPDG~ 248 (768)
.....+.|+|||++++++. +++|.++|+.+++... ...+ ..|.. .+. -++|++.
T Consensus 325 vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~-~i~vgg~~Phpg~g~~--~~~p~~g 401 (567)
T 1qks_A 325 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVA-IEDTGGQTPHPGRGAN--FVHPTFG 401 (567)
T ss_dssp EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE-EEECSSSSBCCTTCEE--EEETTTE
T ss_pred EecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEE-EEeccCcCCCCcccee--eECCCCC
Confidence 0122568999999998887 4669999999887543 1111 11221 222 2688866
Q ss_pred eEEEEE
Q 004203 249 PLLLTA 254 (768)
Q Consensus 249 ~LlaS~ 254 (768)
.+.+++
T Consensus 402 ~v~~t~ 407 (567)
T 1qks_A 402 PVWATS 407 (567)
T ss_dssp EEEEEE
T ss_pred cEEEeC
Confidence 565554
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.14 E-value=5.1e-09 Score=122.80 Aligned_cols=146 Identities=8% Similarity=0.016 Sum_probs=107.9
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCC-----eEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCe------
Q 004203 105 PPPRSTIAAAFSPDGKTLASTHGDH-----TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHE------ 173 (768)
Q Consensus 105 gH~~~VtslafSPDG~~LaSgS~Dg-----tVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~Dgt------ 173 (768)
+|...+..++|||||++|+.++.++ +|++||+++++.+.....+. .+..++|+| |++.|++++.|+.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTH-DGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECT-TSSEEEEEECCCCSSCCSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEe-CCCEEEEEEECCccccccc
Confidence 3545689999999999999776643 89999999998765433222 367799999 9999999888766
Q ss_pred ----------EEEEECCCCcEE--EEec---CCCCeEEEEEcCCCCEEEEEEC------CeEEEEEcCC------Ccccc
Q 004203 174 ----------VRLWNASTAECI--GSRD---FYRPIASIAFHASGELLAVASG------HKLYIWRYNM------REETS 226 (768)
Q Consensus 174 ----------VrLWDl~sg~~i--~~l~---h~~~V~svafSPDG~~LatgSd------d~I~IWDl~t------~~~~~ 226 (768)
|++|++.+++.. ..+. +...+..+.|+|||++|++.+. ..|++||+.+ +..
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-- 277 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-- 277 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC--
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc--
Confidence 999999987632 2222 3456789999999999888762 2499999976 321
Q ss_pred CCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 227 SPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 227 ~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
....+..+...+.. .|+|+|+.|++.+.
T Consensus 278 ~~~~l~~~~~~~~~-~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 278 KWVKLIDNFEGEYD-YVTNEGTVFTFKTN 305 (710)
T ss_dssp CCEEEECSSSSCEE-EEEEETTEEEEEEC
T ss_pred ceEEeeCCCCcEEE-EEeccCCEEEEEEC
Confidence 13345556556655 58999998887764
No 179
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.11 E-value=1.4e-09 Score=117.72 Aligned_cols=96 Identities=10% Similarity=0.095 Sum_probs=74.6
Q ss_pred CCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCEEEEEeC----------CCeEEEEeCCCCeEEEEEecC------
Q 004203 89 EAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTHG----------DHTVKIIDCQTGSCLKVLHGH------ 148 (768)
Q Consensus 89 ~DgsIrlWd~~t~~L----~gH~~~VtslafSPDG~~LaSgS~----------DgtVrVWDl~tg~~l~~l~gH------ 148 (768)
.|+.|.+||..++++ ..+..+ .++|+|||++|+++.. ++.|.+||+.+++.+..+...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 367899999877642 334333 8999999999999863 678999999999988877632
Q ss_pred CCCcEEEEEccCCCCEEEEEeC--CCeEEEEECCCCcEEEE
Q 004203 149 RRTPWVVRFHPLNPTIIASGSL--DHEVRLWNASTAECIGS 187 (768)
Q Consensus 149 ~g~V~sVafSP~dg~lLaSgS~--DgtVrLWDl~sg~~i~~ 187 (768)
......++|+| ++++|+++.. +++|.+||+.+++.+..
T Consensus 107 g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 107 LNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 34577899999 8888888764 57899999988766554
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.11 E-value=8.3e-09 Score=108.17 Aligned_cols=160 Identities=11% Similarity=0.101 Sum_probs=104.6
Q ss_pred EecCCCEEEEEeCC---C--eEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCC--------------------
Q 004203 77 GRDARRGLASWVEA---E--SLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGD-------------------- 128 (768)
Q Consensus 77 ~~d~g~~LvSgs~D---g--sIrlWd~~t~~---L~gH~~~VtslafSPDG~~LaSgS~D-------------------- 128 (768)
.+.+++.|+..+.+ + .|.+|++.+++ +..+.. +..++|+|||+.|+.++.+
T Consensus 66 ~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~ 144 (347)
T 2gop_A 66 ISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDL 144 (347)
T ss_dssp ECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC----
T ss_pred ECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCc
Confidence 33456666655433 2 37777877652 333344 9999999999999988743
Q ss_pred -------CeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCC---------eEEEEECCCCcEEEEecCCC
Q 004203 129 -------HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDH---------EVRLWNASTAECIGSRDFYR 192 (768)
Q Consensus 129 -------gtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~Dg---------tVrLWDl~sg~~i~~l~h~~ 192 (768)
..|++||+.+++.+..+.. . .+..+.|+| ++ +++++..+. .|+++| +++......+ .
T Consensus 145 ~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~ 217 (347)
T 2gop_A 145 GFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-V 217 (347)
T ss_dssp -----CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-E
T ss_pred ccccCccceEEEEECCCCeEEeeecC-C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeC--CCceEEeccC-c
Confidence 5799999999987455554 3 788999999 77 777776542 455556 6655444444 4
Q ss_pred CeEEEEEcCCCCEEEEEEC-C--------eEEEEEcCCCccccCCeEeecCCCCeEE-EEEccCCCeEEEE
Q 004203 193 PIASIAFHASGELLAVASG-H--------KLYIWRYNMREETSSPRIVLRTRRSLRA-VHFHPHAAPLLLT 253 (768)
Q Consensus 193 ~V~svafSPDG~~LatgSd-d--------~I~IWDl~t~~~~~~~~~l~~h~~~V~s-VaFSPDG~~LlaS 253 (768)
.+.. ++|||++|++.+. + .|++|| +++... ....+...+.. +.|+ || .++++
T Consensus 218 ~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~---l~~~~~~~~~~~~~~s-dg-~~~~~ 279 (347)
T 2gop_A 218 SFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMG---ILDEVDRGVGQAKIKD-GK-VYFTL 279 (347)
T ss_dssp SEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEE---SSTTCCSEEEEEEEET-TE-EEEEE
T ss_pred ceee--ECCCCCEEEEEEccccCCccccceEEEEC--CCceEe---ccccCCcccCCccEEc-Cc-EEEEE
Confidence 4444 4999998888773 2 377777 333211 12334567886 9999 88 44443
No 181
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.07 E-value=3.3e-09 Score=114.84 Aligned_cols=170 Identities=11% Similarity=0.101 Sum_probs=122.9
Q ss_pred EEEEecCCCEEEEEe----------CCCeEEEEeCCCCCC----CC------CCCCeEEEEECCCCCEEEEEeC--CCeE
Q 004203 74 FEAGRDARRGLASWV----------EAESLHHLRPKYCPL----SP------PPRSTIAAAFSPDGKTLASTHG--DHTV 131 (768)
Q Consensus 74 ~~a~~d~g~~LvSgs----------~DgsIrlWd~~t~~L----~g------H~~~VtslafSPDG~~LaSgS~--DgtV 131 (768)
-.+...+++.++... .++.|.+||..+.+. .. +......++|+|||++|+++.. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 445566777777765 356799999886532 11 2345678999999999998874 6789
Q ss_pred EEEeCCCCeEEEE-EecC-------------------------------CCCcE--------------------------
Q 004203 132 KIIDCQTGSCLKV-LHGH-------------------------------RRTPW-------------------------- 153 (768)
Q Consensus 132 rVWDl~tg~~l~~-l~gH-------------------------------~g~V~-------------------------- 153 (768)
.+||+++++.+.. +... .+.+.
T Consensus 134 ~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 213 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDK 213 (361)
T ss_dssp EEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSE
T ss_pred EEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCE
Confidence 9999988776655 2100 00000
Q ss_pred --------------------------------------------EEEEccCCCCEEEEEeC-----------CCeEEEEE
Q 004203 154 --------------------------------------------VVRFHPLNPTIIASGSL-----------DHEVRLWN 178 (768)
Q Consensus 154 --------------------------------------------sVafSP~dg~lLaSgS~-----------DgtVrLWD 178 (768)
.++|+| +++.++.+.. +++|.+||
T Consensus 214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD 292 (361)
T 2oiz_A 214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMD 292 (361)
T ss_dssp EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEE
T ss_pred EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec-CCCeEEEEEccCCCcccccCCCceEEEEE
Confidence 156777 5555544432 34899999
Q ss_pred CCCCcEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCC--ccccCCeEeecCCCCeEEEEEccCCC
Q 004203 179 ASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMR--EETSSPRIVLRTRRSLRAVHFHPHAA 248 (768)
Q Consensus 179 l~sg~~i~~l~h~~~V~svafSPDG~~LatgSdd~I~IWDl~t~--~~~~~~~~l~~h~~~V~sVaFSPDG~ 248 (768)
+.+++.+..+.... +..++|+|||++|++++.+.|.+||..++ +... .+.......+.+.|+|||+
T Consensus 293 ~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~---~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 293 TKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLR---TIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTTTEEEEEEECTT-CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEE---EETTSCSSEEEEEECCCSC
T ss_pred CCCCcEEEEEecCC-eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeE---EeccCCCCcEEEEecCCCC
Confidence 99999999887656 99999999999999888867999999998 6533 3345677889999999996
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.06 E-value=3.5e-08 Score=104.91 Aligned_cols=172 Identities=9% Similarity=0.010 Sum_probs=124.9
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCCCC---CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCC-----C
Q 004203 79 DARRGLASWVEAESLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR-----R 150 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~~L~---gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~-----g 150 (768)
+++...++...++.|.+||..+.++. ........++++++++.+++...++.|.+||.++++....+.... .
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~ 131 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESG 131 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCC
Confidence 34555555566789999999877432 245678999999998544444489999999999999887776433 1
Q ss_pred CcEEEEEccCCCCEEEEEe-CCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEC-----------CeEEEEE
Q 004203 151 TPWVVRFHPLNPTIIASGS-LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG-----------HKLYIWR 218 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS-~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSd-----------d~I~IWD 218 (768)
....+++ . ++.++++.. .+++|.+||+.+++.+..+........++++|+|+++++... +.|.+||
T Consensus 132 ~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id 209 (328)
T 3dsm_A 132 STEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRID 209 (328)
T ss_dssp BCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEE
T ss_pred CcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEE
Confidence 4556777 4 566666554 488999999999998888776666778999999997666654 3599999
Q ss_pred cCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 219 YNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 219 l~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
..+.+... ............++|+||++++.++.
T Consensus 210 ~~t~~v~~--~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 210 AETFTVEK--QFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp TTTTEEEE--EEECCTTCCCEEEEECTTSCEEEEES
T ss_pred CCCCeEEE--EEecCCCCCceeEEEecCCCEEEEEc
Confidence 98876532 11111234789999999999777653
No 183
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.06 E-value=2.5e-09 Score=118.39 Aligned_cols=170 Identities=11% Similarity=0.028 Sum_probs=126.3
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCC--------------CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q 004203 73 IFEAGRDARRGLASWVEAESLHHLRPKYC--------------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT 138 (768)
Q Consensus 73 l~~a~~d~g~~LvSgs~DgsIrlWd~~t~--------------~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~t 138 (768)
.+.+....++.+++++.+ .+.+|+.+.- ....+.. |+.++| |+++|+++ .++.|++||+.+
T Consensus 41 nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~s 115 (388)
T 1xip_A 41 QNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEE 115 (388)
T ss_dssp BCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSS
T ss_pred cEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchh
Confidence 334455677788888887 5555875421 1224566 999999 99999999 889999999988
Q ss_pred CeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEE
Q 004203 139 GSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS-GHKLYIW 217 (768)
Q Consensus 139 g~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgS-dd~I~IW 217 (768)
......+..|...+..+.+.+ . .++.+..||+|.+||+.++.... +...|.+++|+|+| ++.+. ++++++|
T Consensus 116 l~~~~~~~~~~~~v~~i~~~~-p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~ 187 (388)
T 1xip_A 116 LSEFRTVTSFEKPVFQLKNVN-N--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQSF 187 (388)
T ss_dssp TTCEEEEEECSSCEEEEEECS-S--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSCEEEE
T ss_pred hhccCccceeecceeeEEecC-C--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCcEEEE
Confidence 776667777888888888776 2 38889999999999999887654 34689999999999 45555 6679999
Q ss_pred EcCCCcc--cc---CCeEee---cCCCCeEEEEEccCCCeEEEEEe
Q 004203 218 RYNMREE--TS---SPRIVL---RTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 218 Dl~t~~~--~~---~~~~l~---~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
+...... .. .+..+. +|...|.+|.|.+++.++++=..
T Consensus 188 ~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~ 233 (388)
T 1xip_A 188 AWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGN 233 (388)
T ss_dssp EEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEEC
T ss_pred cCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcC
Confidence 8877663 11 111112 36788999999999997765443
No 184
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.04 E-value=4.8e-08 Score=100.04 Aligned_cols=166 Identities=13% Similarity=0.110 Sum_probs=119.1
Q ss_pred CCCEEEEEeC--CCeEEEEeCCCCC---C-CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEe--cCCCC
Q 004203 80 ARRGLASWVE--AESLHHLRPKYCP---L-SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH--GHRRT 151 (768)
Q Consensus 80 ~g~~LvSgs~--DgsIrlWd~~t~~---L-~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~--gH~g~ 151 (768)
....++.... ++.|.+|+..... + ..+...+.+++++++|+++++...++.|++||.+ ++.+..+. ++...
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~ 165 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEF 165 (286)
T ss_dssp TTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSS
T ss_pred CCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCC
Confidence 3444444442 7899999954331 2 2345678999999999988888888999999964 66666664 34456
Q ss_pred cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC---CCeEEEEEcCCCCEEEEEEC-C-eEEEEEcCCCcccc
Q 004203 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY---RPIASIAFHASGELLAVASG-H-KLYIWRYNMREETS 226 (768)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~---~~V~svafSPDG~~LatgSd-d-~I~IWDl~t~~~~~ 226 (768)
+..++++| +++++++...++.|++||. +++.+..+... ..+..++++++|+++++... + .|++||.... ...
T Consensus 166 p~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~-~~~ 242 (286)
T 1q7f_A 166 PNGVVVND-KQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ-LIS 242 (286)
T ss_dssp EEEEEECS-SSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC-EEE
T ss_pred cEEEEECC-CCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC-EEE
Confidence 88999999 8888888888999999997 45566665433 57889999999998877764 3 7999996433 222
Q ss_pred CCeEeecC--CCCeEEEEEccCCCeEEE
Q 004203 227 SPRIVLRT--RRSLRAVHFHPHAAPLLL 252 (768)
Q Consensus 227 ~~~~l~~h--~~~V~sVaFSPDG~~Lla 252 (768)
.+..+ ...+.+++|+|+|+.+++
T Consensus 243 ---~~~~~~~~~~~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 243 ---ALESKVKHAQCFDVALMDDGSVVLA 267 (286)
T ss_dssp ---EEEESSCCSCEEEEEEETTTEEEEE
T ss_pred ---EEcccCCCCcceeEEECCCCcEEEE
Confidence 22222 235789999999984444
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.03 E-value=1.9e-08 Score=105.15 Aligned_cols=166 Identities=11% Similarity=0.038 Sum_probs=126.2
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCC----CCCCC-CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCC-CCc
Q 004203 79 DARRGLASWVEAESLHHLRPKYCP----LSPPP-RSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR-RTP 152 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~~----L~gH~-~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~-g~V 152 (768)
+.+..|++++.++.|.+||.++++ +..+. ..+.++.++|+|++|+ +.++.|+.||. +|+.+..+..+. ..+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 356778888999999999997773 44444 4789999999999988 45788999998 899999988653 468
Q ss_pred EEEEEccCCCCEEEEEeC-CCeEEEEECCCCcEEEEecCC-------CCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCc
Q 004203 153 WVVRFHPLNPTIIASGSL-DHEVRLWNASTAECIGSRDFY-------RPIASIAFHASGELLAVASG-HKLYIWRYNMRE 223 (768)
Q Consensus 153 ~sVafSP~dg~lLaSgS~-DgtVrLWDl~sg~~i~~l~h~-------~~V~svafSPDG~~LatgSd-d~I~IWDl~t~~ 223 (768)
.++.+.+ +++++++.+. ++.|..+|. +|+.+..+... .....+++.++|++|++..+ +.|..||.. ++
T Consensus 80 ~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 80 QTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 8889999 9999998887 778888886 67776665321 23455678999999988874 559999987 65
Q ss_pred cccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 224 ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 224 ~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
... . ......+.++.+.++|+.+++..
T Consensus 157 ~~w---~-~~~~~~~~~~~~~~~g~~~v~~~ 183 (276)
T 3no2_A 157 LLN---S-VKLSGTPFSSAFLDNGDCLVACG 183 (276)
T ss_dssp EEE---E-EECSSCCCEEEECTTSCEEEECB
T ss_pred EEE---E-EECCCCccceeEcCCCCEEEEeC
Confidence 533 2 22234567788899999776544
No 186
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.03 E-value=1.2e-08 Score=120.54 Aligned_cols=238 Identities=12% Similarity=0.014 Sum_probs=144.7
Q ss_pred EecCCCEEEEEeCC-----CeEEEEeCCCCCCC-CCCCC--eEEEEECCCCCEEEEEeCCCe--------------EEEE
Q 004203 77 GRDARRGLASWVEA-----ESLHHLRPKYCPLS-PPPRS--TIAAAFSPDGKTLASTHGDHT--------------VKII 134 (768)
Q Consensus 77 ~~d~g~~LvSgs~D-----gsIrlWd~~t~~L~-gH~~~--VtslafSPDG~~LaSgS~Dgt--------------VrVW 134 (768)
.+.+++.|+....+ ..|++||+.+++.. .+... +..++|+|| +.|+.++.|.. |++|
T Consensus 170 ~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~ 248 (741)
T 1yr2_A 170 ASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLH 248 (741)
T ss_dssp ECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEE
T ss_pred ECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEE
Confidence 34556666554432 46999999987532 11122 357899999 99998887654 9999
Q ss_pred eCCCCeE--EEEEecC--CCCcEEEEEccCCCCEEEEEeCCC-----eEEEEECCCC--c-EEEEecCCCCeEEEEEcCC
Q 004203 135 DCQTGSC--LKVLHGH--RRTPWVVRFHPLNPTIIASGSLDH-----EVRLWNASTA--E-CIGSRDFYRPIASIAFHAS 202 (768)
Q Consensus 135 Dl~tg~~--l~~l~gH--~g~V~sVafSP~dg~lLaSgS~Dg-----tVrLWDl~sg--~-~i~~l~h~~~V~svafSPD 202 (768)
++.++.. ...+... ...+..+.|+| |+++|+..+.++ .|++||+.++ + ......+...+... ++|+
T Consensus 249 ~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~d 326 (741)
T 1yr2_A 249 RLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGV 326 (741)
T ss_dssp ETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEE
T ss_pred ECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-Eecc
Confidence 9988752 3344332 23578899999 888888776543 8999999887 4 44444444444444 3489
Q ss_pred CCEEEEEECC-----eEEEEEcCCCc-cccCCeEeecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCccc
Q 004203 203 GELLAVASGH-----KLYIWRYNMRE-ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWR 276 (768)
Q Consensus 203 G~~LatgSdd-----~I~IWDl~t~~-~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~ 276 (768)
|+.|++.++. +|.+||+.+.. .. ...+..+...+..+.|+ +..++++...+...
T Consensus 327 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~--~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~---------------- 386 (741)
T 1yr2_A 327 GDQLWFVSGDGAPLKKIVRVDLSGSTPRF--DTVVPESKDNLESVGIA--GNRLFASYIHDAKS---------------- 386 (741)
T ss_dssp TTEEEEEECTTCTTCEEEEEECSSSSCEE--EEEECCCSSEEEEEEEE--BTEEEEEEEETTEE----------------
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCcccc--EEEecCCCCeEEEEEEE--CCEEEEEEEECCEE----------------
Confidence 9988888742 29999987742 11 11233344456677777 44466555422110
Q ss_pred CCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecCCCCCcceEEeccCCCceeee
Q 004203 277 YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRL 344 (768)
Q Consensus 277 ~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d~~~Gs~~~~~~~~ss~~~rl 344 (768)
.+.+.+.. +........ + ....+..+++++|++.|++...+...+...+..+..+...+.|
T Consensus 387 ----~l~~~~~~-g~~~~~l~~-~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 387 ----QVLAFDLD-GKPAGAVSL-P-GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp ----EEEEEETT-SCEEEECBC-S-SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred ----EEEEEeCC-CCceeeccC-C-CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 11111100 000000000 0 0112336788999999999888888888888888876654433
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.01 E-value=4.1e-09 Score=110.31 Aligned_cols=147 Identities=12% Similarity=0.106 Sum_probs=110.0
Q ss_pred CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCC----CeEEEEE
Q 004203 103 LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLD----HEVRLWN 178 (768)
Q Consensus 103 L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~D----gtVrLWD 178 (768)
+..+...+.+++|+++|++++++..++.|++||.++++....+..+...+..++|+| +++++++...+ +.|++||
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEEC
T ss_pred EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEe
Confidence 345666789999999999888888899999999998887665545667899999999 88888877766 6899999
Q ss_pred CCCCcEEEEec---CCCCeEEEEEcCCCCEEEEEEC-------CeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCC
Q 004203 179 ASTAECIGSRD---FYRPIASIAFHASGELLAVASG-------HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAA 248 (768)
Q Consensus 179 l~sg~~i~~l~---h~~~V~svafSPDG~~LatgSd-------d~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~ 248 (768)
..+++....+. ....+..++++|+|+++++... +.|+.||..+++.. .+......+..++|+|||+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT----PIIQNISVANGIALSTDEK 194 (333)
T ss_dssp TTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE----EEEEEESSEEEEEECTTSS
T ss_pred CCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE----EeecCCCcccceEECCCCC
Confidence 98887653332 3457899999999998776653 23666665543321 2223344688999999998
Q ss_pred eEEEEE
Q 004203 249 PLLLTA 254 (768)
Q Consensus 249 ~LlaS~ 254 (768)
.++++.
T Consensus 195 ~l~v~~ 200 (333)
T 2dg1_A 195 VLWVTE 200 (333)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 666554
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.00 E-value=1.5e-08 Score=107.31 Aligned_cols=174 Identities=13% Similarity=0.165 Sum_probs=126.9
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCC--CC------------CCCCCCeEEEEECC-CCCEEEEEe-CCCeEEEEeCCC
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYC--PL------------SPPPRSTIAAAFSP-DGKTLASTH-GDHTVKIIDCQT 138 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~--~L------------~gH~~~VtslafSP-DG~~LaSgS-~DgtVrVWDl~t 138 (768)
.+...++..+++...++.|++|+.... .+ .++-....+++|+| +|+++++.+ .++.|++|| .+
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~ 174 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PS 174 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TT
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CC
Confidence 334445667777777899999998654 11 34455789999999 788888876 699999999 56
Q ss_pred CeEEEEEecCC----------CCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec---CCCCeEEEEEcCCCCE
Q 004203 139 GSCLKVLHGHR----------RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHASGEL 205 (768)
Q Consensus 139 g~~l~~l~gH~----------g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~---h~~~V~svafSPDG~~ 205 (768)
++.+..+.... ..+..++++|+.+.++++...++.|++||..+++.+..+. +...+..++|+| +..
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~ 253 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFL 253 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEE
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEE
Confidence 77777774322 3388999999338888888889999999999898888764 456788999999 433
Q ss_pred EEEEE--------CCeEEEEEcCCCccccCCeEe---ecCCCCeEEEEEccCCCeEEEEE
Q 004203 206 LAVAS--------GHKLYIWRYNMREETSSPRIV---LRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 206 LatgS--------dd~I~IWDl~t~~~~~~~~~l---~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
++..+ ...|++||+.+++... .+ ..+...+..|+|+|+|. ++++.
T Consensus 254 ~~~~g~~~v~~~~~~~v~~~~~~~g~~~~---~~~~~~~~~~~p~~ia~~~dG~-lyvad 309 (329)
T 3fvz_A 254 FAVNGKPYFGDQEPVQGFVMNFSSGEIID---VFKPVRKHFDMPHDIVASEDGT-VYIGD 309 (329)
T ss_dssp EEEECCCCTTCSCCCCEEEEETTTCCEEE---EECCSSSCCSSEEEEEECTTSE-EEEEE
T ss_pred EEeCCCEEeccCCCcEEEEEEcCCCeEEE---EEcCCCCccCCeeEEEECCCCC-EEEEE
Confidence 33222 1249999998886543 22 24567799999999995 44443
No 189
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.97 E-value=3.3e-08 Score=116.11 Aligned_cols=240 Identities=11% Similarity=0.007 Sum_probs=148.4
Q ss_pred EecCCCEEE-EE----eCCCeEEEEeCCCCCC-CCCCCCe--EEEEECCCCCEEEEEeCCC-------------eEEEEe
Q 004203 77 GRDARRGLA-SW----VEAESLHHLRPKYCPL-SPPPRST--IAAAFSPDGKTLASTHGDH-------------TVKIID 135 (768)
Q Consensus 77 ~~d~g~~Lv-Sg----s~DgsIrlWd~~t~~L-~gH~~~V--tslafSPDG~~LaSgS~Dg-------------tVrVWD 135 (768)
.+.+++.|+ +. ++...|++||+.+++. ..+...+ ..++|+ ||+.|+.++.+. .|++|+
T Consensus 136 ~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~ 214 (693)
T 3iuj_A 136 FSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHR 214 (693)
T ss_dssp ECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEE
T ss_pred ECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEE
Confidence 345565555 22 2335799999998853 2232333 578999 999999998874 499999
Q ss_pred CCCCeE--EEEEec---CCCCcEEEEEccCCCCEEEEEe-C---CCeEEEEECCCC--cEEEEecCCCCeEEEEEcCCCC
Q 004203 136 CQTGSC--LKVLHG---HRRTPWVVRFHPLNPTIIASGS-L---DHEVRLWNASTA--ECIGSRDFYRPIASIAFHASGE 204 (768)
Q Consensus 136 l~tg~~--l~~l~g---H~g~V~sVafSP~dg~lLaSgS-~---DgtVrLWDl~sg--~~i~~l~h~~~V~svafSPDG~ 204 (768)
+.++.. ...+.. |...+..+.|+| |+++|+... . +..|++||+.++ +......+....... |+++|.
T Consensus 215 lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~ 292 (693)
T 3iuj_A 215 LGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGS 292 (693)
T ss_dssp TTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETT
T ss_pred CCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCC
Confidence 987643 333433 344567889999 777665433 2 358999999876 344444444444444 778888
Q ss_pred EEEEEEC-----CeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCC
Q 004203 205 LLAVASG-----HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPP 279 (768)
Q Consensus 205 ~LatgSd-----d~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~ 279 (768)
.|+..++ .+|.++|+.+..... ...+..+...+. .|++++++|++........
T Consensus 293 ~l~~~t~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~------------------- 350 (693)
T 3iuj_A 293 TLYLLTNRDAPNRRLVTVDAANPGPAH-WRDLIPERQQVL--TVHSGSGYLFAEYMVDATA------------------- 350 (693)
T ss_dssp EEEEEECTTCTTCEEEEEETTSCCGGG-CEEEECCCSSCE--EEEEETTEEEEEEEETTEE-------------------
T ss_pred EEEEEECCCCCCCEEEEEeCCCCCccc-cEEEecCCCCEE--EEEEECCEEEEEEEECCee-------------------
Confidence 7776663 239999998765422 234555655555 8999999888776533211
Q ss_pred CeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecCCCCCcceEEeccCCCceeeee
Q 004203 280 PVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLL 345 (768)
Q Consensus 280 ~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d~~~Gs~~~~~~~~ss~~~rl~ 345 (768)
.+.+++........+. . + ....+..+++++|++.|++...+...+...+..+..+...+.|.
T Consensus 351 -~l~~~d~~g~~~~~l~-~-p-~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 351 -RVEQFDYEGKRVREVA-L-P-GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp -EEEEECTTSCEEEEEC-C-S-SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred -EEEEEECCCCeeEEee-c-C-CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 1122221110000000 0 0 00112255678899999999888888888888888766655444
No 190
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.95 E-value=8.3e-08 Score=98.25 Aligned_cols=170 Identities=9% Similarity=0.092 Sum_probs=121.1
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCCC---C------CCCCCCeEEEEE-CCCCCEEEEEeC-CCeEEEEeCCCCeEEEEE
Q 004203 77 GRDARRGLASWVEAESLHHLRPKYCP---L------SPPPRSTIAAAF-SPDGKTLASTHG-DHTVKIIDCQTGSCLKVL 145 (768)
Q Consensus 77 ~~d~g~~LvSgs~DgsIrlWd~~t~~---L------~gH~~~Vtslaf-SPDG~~LaSgS~-DgtVrVWDl~tg~~l~~l 145 (768)
...++..+++...++.|.+||..... + .+|...+.++++ .++++++++... ++.|++|| .+++.+..+
T Consensus 37 ~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~ 115 (286)
T 1q7f_A 37 VNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKF 115 (286)
T ss_dssp ECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEE
T ss_pred ECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEe
Confidence 33445566666778889999877431 1 234567899999 567777666643 88999999 667777766
Q ss_pred ec-CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec---CCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcC
Q 004203 146 HG-HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHASGELLAVAS-GHKLYIWRYN 220 (768)
Q Consensus 146 ~g-H~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~---h~~~V~svafSPDG~~LatgS-dd~I~IWDl~ 220 (768)
.. +...+..++++| +++++++...++.|++||.. ++.+..+. +...+..++++++|+++++.. ++.|++||..
T Consensus 116 ~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 193 (286)
T 1q7f_A 116 GATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE 193 (286)
T ss_dssp CTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred cCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC
Confidence 43 345688999999 88888888888999999964 56655553 335688999999998666655 5669999975
Q ss_pred CCccccCCeEeec--CCCCeEEEEEccCCCeEEEE
Q 004203 221 MREETSSPRIVLR--TRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 221 t~~~~~~~~~l~~--h~~~V~sVaFSPDG~~LlaS 253 (768)
.... . .+.. +...+..++++++|+.+++.
T Consensus 194 g~~~-~---~~~~~g~~~~p~~i~~d~~G~l~v~~ 224 (286)
T 1q7f_A 194 GQYL-R---QIGGEGITNYPIGVGINSNGEILIAD 224 (286)
T ss_dssp CCEE-E---EESCTTTSCSEEEEEECTTCCEEEEE
T ss_pred CCEE-E---EEccCCccCCCcEEEECCCCCEEEEe
Confidence 4321 1 2222 23678999999999855554
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.92 E-value=2e-08 Score=117.59 Aligned_cols=143 Identities=15% Similarity=0.118 Sum_probs=100.8
Q ss_pred CCCCCeEEEEECCCCCEEEE-----EeCCCeEEEEeCCCCeEE-EEEecCCCCcEEEEEccCCCCEEEEEeCCCe-----
Q 004203 105 PPPRSTIAAAFSPDGKTLAS-----THGDHTVKIIDCQTGSCL-KVLHGHRRTPWVVRFHPLNPTIIASGSLDHE----- 173 (768)
Q Consensus 105 gH~~~VtslafSPDG~~LaS-----gS~DgtVrVWDl~tg~~l-~~l~gH~g~V~sVafSP~dg~lLaSgS~Dgt----- 173 (768)
+|...+.+++|||||++|+. |+.+.+|++||+++++.+ .... .......++|+| |++.|++++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~~~~~~~~wsp-Dg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI-EGGKYATPKWTP-DSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB-SCCTTCCCEECT-TSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc-CcccccceEEec-CCCEEEEEEecCCCCCcc
Confidence 56667999999999999994 444679999999999864 1111 111226789999 9999999988776
Q ss_pred --------EEEEECCCCcE--EEEec---CCCCeEEEEEcCCCCEEEEEE-CC--e--EEEEEcCCCccccCCeEeecCC
Q 004203 174 --------VRLWNASTAEC--IGSRD---FYRPIASIAFHASGELLAVAS-GH--K--LYIWRYNMREETSSPRIVLRTR 235 (768)
Q Consensus 174 --------VrLWDl~sg~~--i~~l~---h~~~V~svafSPDG~~LatgS-dd--~--I~IWDl~t~~~~~~~~~l~~h~ 235 (768)
|++|++.+++. ...+. +...+..+.|+|||++|++.+ ++ . |++||..+++ ...+..+.
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~----~~~l~~~~ 271 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD----FRLLVKGV 271 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS----CEEEEECS
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc----eEEeecCC
Confidence 99999998763 22222 345788999999999888776 33 3 7777554432 33455566
Q ss_pred CCeEEEEEccCCCeEEEEEe
Q 004203 236 RSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 236 ~~V~sVaFSPDG~~LlaS~s 255 (768)
..+....| ++|. +++.+.
T Consensus 272 ~~~~~~~~-~~g~-l~~~s~ 289 (695)
T 2bkl_A 272 GAKYEVHA-WKDR-FYVLTD 289 (695)
T ss_dssp SCCEEEEE-ETTE-EEEEEC
T ss_pred CceEEEEe-cCCc-EEEEEC
Confidence 66677767 6777 665543
No 192
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.90 E-value=4.1e-07 Score=94.88 Aligned_cols=177 Identities=7% Similarity=-0.014 Sum_probs=113.0
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEeCCCCCC--CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecC---
Q 004203 74 FEAGRDARRGLASWVEAESLHHLRPKYCPL--SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH--- 148 (768)
Q Consensus 74 ~~a~~d~g~~LvSgs~DgsIrlWd~~t~~L--~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH--- 148 (768)
..+..+.+..+++...++.|..||..++++ ......+.++++++||+++++ . +..|.+||.++++........
T Consensus 18 p~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~ 95 (297)
T 3g4e_A 18 PVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDK 95 (297)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTC
T ss_pred CeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCC
Confidence 333333455566666788899999876632 234567999999999995554 4 568999999988754443321
Q ss_pred -CCCcEEEEEccCCCCEEEEEeCC---------CeEEEEECC-CCcEEEEecCCCCeEEEEEcCCCCEEEEEE--CCeEE
Q 004203 149 -RRTPWVVRFHPLNPTIIASGSLD---------HEVRLWNAS-TAECIGSRDFYRPIASIAFHASGELLAVAS--GHKLY 215 (768)
Q Consensus 149 -~g~V~sVafSP~dg~lLaSgS~D---------gtVrLWDl~-sg~~i~~l~h~~~V~svafSPDG~~LatgS--dd~I~ 215 (768)
...++.++++| +++++++...+ ..-.||.+. .++...........+.++|+||++.|+++. .++|.
T Consensus 96 ~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~ 174 (297)
T 3g4e_A 96 KNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVD 174 (297)
T ss_dssp SSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEE
T ss_pred CCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEE
Confidence 23477899999 88877764321 223444443 244443344444567899999999887766 45699
Q ss_pred EEEcC--CCccccC--CeEeecCCCCeEEEEEccCCCeEEEE
Q 004203 216 IWRYN--MREETSS--PRIVLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 216 IWDl~--t~~~~~~--~~~l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
+||++ ++..... ...+......+..++++++|+.+++.
T Consensus 175 ~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 175 AFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp EEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEE
T ss_pred EEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 99984 3332110 01111233568899999999855544
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.86 E-value=1.6e-07 Score=94.64 Aligned_cols=168 Identities=10% Similarity=0.002 Sum_probs=117.6
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCC---C-CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEE
Q 004203 80 ARRGLASWVEAESLHHLRPKYCPL---S-PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~L---~-gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sV 155 (768)
++. ++....++.|..||.....+ . .....+.+++++++|+++++...++.|.+||..+.............+..+
T Consensus 77 ~g~-l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i 155 (270)
T 1rwi_B 77 AGT-VYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGV 155 (270)
T ss_dssp TCC-EEEEETTTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCE
T ss_pred CCC-EEEEcCCCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeE
Confidence 344 44444488999999876532 2 233678999999999987777788999999876655433323333467889
Q ss_pred EEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEeec
Q 004203 156 RFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLR 233 (768)
Q Consensus 156 afSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l~~ 233 (768)
++++ +++++++...++.|.+||...+...... .....+..++++++|.++++.. ++.|.+||........ ....
T Consensus 156 ~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~---~~~~ 231 (270)
T 1rwi_B 156 AVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV---LPFT 231 (270)
T ss_dssp EECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE---CCCC
T ss_pred EEeC-CCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee---eccC
Confidence 9999 8888877777889999999876654432 2336788999999996665554 4569999986654211 1122
Q ss_pred CCCCeEEEEEccCCCeEEE
Q 004203 234 TRRSLRAVHFHPHAAPLLL 252 (768)
Q Consensus 234 h~~~V~sVaFSPDG~~Lla 252 (768)
+...+.+++++++|+.+++
T Consensus 232 ~~~~p~~i~~~~~g~l~v~ 250 (270)
T 1rwi_B 232 GLNTPLAVAVDSDRTVYVA 250 (270)
T ss_dssp SCSCEEEEEECTTCCEEEE
T ss_pred CCCCceeEEECCCCCEEEE
Confidence 3367899999999984444
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.86 E-value=1e-07 Score=98.39 Aligned_cols=170 Identities=17% Similarity=0.123 Sum_probs=117.3
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCCCCC-------C-CCCCeEEEEECCCCCEEEEE----e-------------CCCeE
Q 004203 77 GRDARRGLASWVEAESLHHLRPKYCPLS-------P-PPRSTIAAAFSPDGKTLAST----H-------------GDHTV 131 (768)
Q Consensus 77 ~~d~g~~LvSgs~DgsIrlWd~~t~~L~-------g-H~~~VtslafSPDG~~LaSg----S-------------~DgtV 131 (768)
...++..+++...++.|.+||..++++. + ....+.+++++|+|+++++. + ..+.|
T Consensus 76 ~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l 155 (296)
T 3e5z_A 76 LNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWV 155 (296)
T ss_dssp ECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEE
T ss_pred ECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEE
Confidence 3344555555555688999998766422 1 12356789999999988873 2 13467
Q ss_pred EEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECC-CCcE---EEEe-cCCCCeEEEEEcCCCCEE
Q 004203 132 KIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS-TAEC---IGSR-DFYRPIASIAFHASGELL 206 (768)
Q Consensus 132 rVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~-sg~~---i~~l-~h~~~V~svafSPDG~~L 206 (768)
..+|.. ++. ..+..+...+..++|+| +++++++.+.++.|++||+. +++. ...+ .....+..++++++|+++
T Consensus 156 ~~~~~~-g~~-~~~~~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~ 232 (296)
T 3e5z_A 156 FRLAPD-GTL-SAPIRDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIW 232 (296)
T ss_dssp EEECTT-SCE-EEEECCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEE
T ss_pred EEECCC-CCE-EEeecCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEE
Confidence 777766 553 44455666788999999 88877777788999999997 5554 2233 133456789999999976
Q ss_pred EEEECCeEEEEEcCCCccccCCeEeecCCCCeEEEEE-ccCCCeEEEEEe
Q 004203 207 AVASGHKLYIWRYNMREETSSPRIVLRTRRSLRAVHF-HPHAAPLLLTAE 255 (768)
Q Consensus 207 atgSdd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaF-SPDG~~LlaS~s 255 (768)
++. +++|.+||.. ++... .+..+.. +.+++| +|+++.|.+++.
T Consensus 233 v~~-~~~v~~~~~~-g~~~~---~~~~~~~-~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 233 ASA-GDGVHVLTPD-GDELG---RVLTPQT-TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp EEE-TTEEEEECTT-SCEEE---EEECSSC-CCEEEEESTTSCEEEEEET
T ss_pred EEc-CCeEEEECCC-CCEEE---EEECCCC-ceeEEEECCCCCEEEEEcC
Confidence 666 7789999986 33222 3344445 899999 689987777664
No 195
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.84 E-value=1.8e-07 Score=99.38 Aligned_cols=169 Identities=11% Similarity=0.044 Sum_probs=120.3
Q ss_pred cCCCEEEEEe-CCCeEEEEeCCCCCCC----CC-----CCCeEEEEECCCCCEEEEEe--CCCeEEEEeCCCCeEEEEEe
Q 004203 79 DARRGLASWV-EAESLHHLRPKYCPLS----PP-----PRSTIAAAFSPDGKTLASTH--GDHTVKIIDCQTGSCLKVLH 146 (768)
Q Consensus 79 d~g~~LvSgs-~DgsIrlWd~~t~~L~----gH-----~~~VtslafSPDG~~LaSgS--~DgtVrVWDl~tg~~l~~l~ 146 (768)
.++ .++... .++.|.+||..+.++. .. ......+++ +++.|+.+. .++.|.+||+++++.+..+.
T Consensus 93 ~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 93 SDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp ETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred CCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 344 454444 7899999999876321 11 114556777 455555555 48899999999999888876
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCC----------CeEEEEECCCCcEEEEecC--CCCeEEEEEcCCCCEEEEEECCeE
Q 004203 147 GHRRTPWVVRFHPLNPTIIASGSLD----------HEVRLWNASTAECIGSRDF--YRPIASIAFHASGELLAVASGHKL 214 (768)
Q Consensus 147 gH~g~V~sVafSP~dg~lLaSgS~D----------gtVrLWDl~sg~~i~~l~h--~~~V~svafSPDG~~LatgSdd~I 214 (768)
.. .....+.++| +++++++...+ +.|.+||..+++....+.. ......++|+||+++|+++.. .|
T Consensus 170 ~g-~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v 246 (328)
T 3dsm_A 170 IG-IQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DI 246 (328)
T ss_dssp CS-SCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SE
T ss_pred cC-CCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EE
Confidence 53 3467789999 88877776654 7899999999988777654 346889999999999988765 89
Q ss_pred EEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 215 YIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 215 ~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
.+||..+++..... .+.........++++|++..+.++.
T Consensus 247 ~~~d~~t~~~~~~~-~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 247 WRMPVEADRVPVRP-FLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp EEEETTCSSCCSSC-SBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred EEEECCCCceeeee-eecCCCCceEEEEEcCCCCeEEEEc
Confidence 99999887653211 1111246789999999655555554
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.82 E-value=1.3e-06 Score=89.91 Aligned_cols=163 Identities=10% Similarity=0.061 Sum_probs=108.7
Q ss_pred EeCCCeEEEEeCCCCCCC--------CCCCCeEEEEECCC-CCEEEEEeCCCeEEEEeCCCCeEEEE-Eec----CCCCc
Q 004203 87 WVEAESLHHLRPKYCPLS--------PPPRSTIAAAFSPD-GKTLASTHGDHTVKIIDCQTGSCLKV-LHG----HRRTP 152 (768)
Q Consensus 87 gs~DgsIrlWd~~t~~L~--------gH~~~VtslafSPD-G~~LaSgS~DgtVrVWDl~tg~~l~~-l~g----H~g~V 152 (768)
...++.|..|+..++++. ++...+.+++++++ |+++++. ....|.+||.+ ++.... ... ....+
T Consensus 42 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 119 (314)
T 1pjx_A 42 GKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGC 119 (314)
T ss_dssp TEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCC
T ss_pred CCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCC
Confidence 356788999987665321 25567999999999 6655544 44479999998 765433 221 12357
Q ss_pred EEEEEccCCCCEEEEEeCC---------------CeEEEEECCCCcEEEEecCCCCeEEEEEc----CCCCEEEEEE--C
Q 004203 153 WVVRFHPLNPTIIASGSLD---------------HEVRLWNASTAECIGSRDFYRPIASIAFH----ASGELLAVAS--G 211 (768)
Q Consensus 153 ~sVafSP~dg~lLaSgS~D---------------gtVrLWDl~sg~~i~~l~h~~~V~svafS----PDG~~LatgS--d 211 (768)
..+++++ +++++++...+ +.|..||.. ++.............++|+ |+++.|+++. +
T Consensus 120 ~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~ 197 (314)
T 1pjx_A 120 NDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPT 197 (314)
T ss_dssp CEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTT
T ss_pred cCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCC
Confidence 8999999 88888777655 578888876 6655444444556889999 9998776665 4
Q ss_pred CeEEEEEcC-CCccccC-C-eEeecCC-CCeEEEEEccCCCeEEEE
Q 004203 212 HKLYIWRYN-MREETSS-P-RIVLRTR-RSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 212 d~I~IWDl~-t~~~~~~-~-~~l~~h~-~~V~sVaFSPDG~~LlaS 253 (768)
++|++||++ .+..... . ..+..+. ..+..++++++|+.+++.
T Consensus 198 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 198 KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEE
Confidence 569999986 3321110 0 1111222 568899999999866554
No 197
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.82 E-value=1.4e-07 Score=110.70 Aligned_cols=208 Identities=12% Similarity=0.082 Sum_probs=127.0
Q ss_pred CCCCCeEEEEECCCCCEEEEEe-----CCCeEEEEeCCCCeEEEE-EecCCCCcEEEEEccCCCCEEEEEeCCC------
Q 004203 105 PPPRSTIAAAFSPDGKTLASTH-----GDHTVKIIDCQTGSCLKV-LHGHRRTPWVVRFHPLNPTIIASGSLDH------ 172 (768)
Q Consensus 105 gH~~~VtslafSPDG~~LaSgS-----~DgtVrVWDl~tg~~l~~-l~gH~g~V~sVafSP~dg~lLaSgS~Dg------ 172 (768)
+|...+.+++|||||++|+.+. .+.+|++||+++|+.+.. +.+. ....++|+ |++.|+.++.|.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws--Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL--GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE--TTTEEEEEESSCCC----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe--CCCEEEEEEecCcccccc
Confidence 4666899999999999998543 346899999999986543 2221 13457898 567777777663
Q ss_pred -------eEEEEECCCCcE--EEEec----CCCCeEEEEEcCCCCEEEEEEC-----CeEEEEEcCCCccccCCeEeecC
Q 004203 173 -------EVRLWNASTAEC--IGSRD----FYRPIASIAFHASGELLAVASG-----HKLYIWRYNMREETSSPRIVLRT 234 (768)
Q Consensus 173 -------tVrLWDl~sg~~--i~~l~----h~~~V~svafSPDG~~LatgSd-----d~I~IWDl~t~~~~~~~~~l~~h 234 (768)
.|++|++.++.. ...+. +...+..+.|+|||++|+.... ..|++||+.++.. ....+..+
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~--~~~~l~~~ 279 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA--PLLTVQGD 279 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC--CCEEEECS
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC--ceEEEeCC
Confidence 499999988653 22222 2345788999999998876552 2499999987643 23345555
Q ss_pred CCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecC
Q 004203 235 RRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRD 314 (768)
Q Consensus 235 ~~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpD 314 (768)
....... |+++|..|++.++... +...|..++...+.........+... .. . .|+++
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~-------------------~~~~l~~~d~~~~~~~~~~~l~~~~~-~~-~-~~s~~ 336 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDA-------------------PNRRLVTVDAANPGPAHWRDLIPERQ-QV-L-TVHSG 336 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTC-------------------TTCEEEEEETTSCCGGGCEEEECCCS-SC-E-EEEEE
T ss_pred CCceEEE-EeccCCEEEEEECCCC-------------------CCCEEEEEeCCCCCccccEEEecCCC-CE-E-EEEEE
Confidence 5555555 7788887877664211 11234444433332211111111111 12 2 89999
Q ss_pred CCEEEEEecCCCCCcceEEeccCCCcee
Q 004203 315 DERISLQHTEHDSGATRTQQSLRSSSSV 342 (768)
Q Consensus 315 G~rIv~~~~d~~~Gs~~~~~~~~ss~~~ 342 (768)
+++|++...++... .+...+.++....
T Consensus 337 g~~lv~~~~~~g~~-~l~~~d~~g~~~~ 363 (693)
T 3iuj_A 337 SGYLFAEYMVDATA-RVEQFDYEGKRVR 363 (693)
T ss_dssp TTEEEEEEEETTEE-EEEEECTTSCEEE
T ss_pred CCEEEEEEEECCee-EEEEEECCCCeeE
Confidence 99999875544332 3344455544433
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.80 E-value=2.7e-07 Score=108.94 Aligned_cols=145 Identities=14% Similarity=0.069 Sum_probs=101.0
Q ss_pred CCCCeEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCe-------
Q 004203 106 PPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHE------- 173 (768)
Q Consensus 106 H~~~VtslafSPDG~~LaSgS~D-----gtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~Dgt------- 173 (768)
|...+..++|||||++|+.++.+ .+|++||+++++.+.... +...+..++|+| | +.|++++.|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLG-N-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEEST-T-SEEEEEECCCC-------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEEC-C-CEEEEEEecCcccccccc
Confidence 44468899999999999987654 579999999998755421 222235689999 7 88888776654
Q ss_pred -------EEEEECCCCcE--EEEec---CCCCeEEEEEcCCCCEEEEEE-CC-----eEEEEEcCCCccccCCeEeecCC
Q 004203 174 -------VRLWNASTAEC--IGSRD---FYRPIASIAFHASGELLAVAS-GH-----KLYIWRYNMREETSSPRIVLRTR 235 (768)
Q Consensus 174 -------VrLWDl~sg~~--i~~l~---h~~~V~svafSPDG~~LatgS-dd-----~I~IWDl~t~~~~~~~~~l~~h~ 235 (768)
|++|++.+++. ...+. +...+..+.|+|||++|++.+ ++ .|++||+.++... ....+..+.
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~ 316 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIG-PVTALIPDL 316 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEEC-CCEEEECSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCc-ccEEecCCC
Confidence 99999988763 22232 223588999999999888776 32 4999999876321 023444555
Q ss_pred CCeEEEEEccCCCeEEEEEe
Q 004203 236 RSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 236 ~~V~sVaFSPDG~~LlaS~s 255 (768)
..+.... +|+|+.|++.+.
T Consensus 317 ~~~~~~~-~~dg~~l~~~s~ 335 (741)
T 1yr2_A 317 KAQWDFV-DGVGDQLWFVSG 335 (741)
T ss_dssp SSCEEEE-EEETTEEEEEEC
T ss_pred CceEEEE-eccCCEEEEEEC
Confidence 5555553 489998887764
No 199
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.74 E-value=2.9e-06 Score=90.00 Aligned_cols=168 Identities=13% Similarity=0.011 Sum_probs=110.6
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCCC--CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecC----CCCcE
Q 004203 80 ARRGLASWVEAESLHHLRPKYCPLS--PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH----RRTPW 153 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~L~--gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH----~g~V~ 153 (768)
++..+++...++.|..|+..++++. .....+.+++|++||+++++. .+ .|++||.++++........ ...++
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~ 137 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSN 137 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCC
Confidence 3455556666778888887765321 234679999999999887754 44 5999999888754433211 13478
Q ss_pred EEEEccCCCCEEEEEeC------CCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcC--CC-
Q 004203 154 VVRFHPLNPTIIASGSL------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYN--MR- 222 (768)
Q Consensus 154 sVafSP~dg~lLaSgS~------DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgS--dd~I~IWDl~--t~- 222 (768)
.+.++| +++++++... .+.|+.+| +++.............++|+|||+.|+++. ++.|.+||++ ++
T Consensus 138 ~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl 214 (326)
T 2ghs_A 138 DGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGL 214 (326)
T ss_dssp EEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCC
T ss_pred CEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCC
Confidence 899999 8887766542 24566666 565544333334567899999999887766 3459999986 44
Q ss_pred ccccCCeEee---cCCCCeEEEEEccCCCeEEEE
Q 004203 223 EETSSPRIVL---RTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 223 ~~~~~~~~l~---~h~~~V~sVaFSPDG~~LlaS 253 (768)
.... ...+. .....+..++++++|..++++
T Consensus 215 ~~~~-~~~~~~~~~~~~~p~gi~~d~~G~lwva~ 247 (326)
T 2ghs_A 215 PTGK-AEVFIDSTGIKGGMDGSVCDAEGHIWNAR 247 (326)
T ss_dssp BSSC-CEEEEECTTSSSEEEEEEECTTSCEEEEE
T ss_pred cccC-ceEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 2211 11111 133567889999999865554
No 200
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.74 E-value=6e-07 Score=93.81 Aligned_cols=171 Identities=11% Similarity=0.013 Sum_probs=114.0
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC--CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecC----CCCc
Q 004203 79 DARRGLASWVEAESLHHLRPKYC--PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH----RRTP 152 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~--~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH----~g~V 152 (768)
+++..+++...++.|..|+.... .+..+...+.+++++++|+++++...++.|.+||.+ ++........ ...+
T Consensus 55 ~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~ 133 (305)
T 3dr2_A 55 AQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSP 133 (305)
T ss_dssp GGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCC
T ss_pred CCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCC
Confidence 33445677777888888887422 233456779999999999977766667899999986 6543322211 1346
Q ss_pred EEEEEccCCCCEEEE----EeC-------------CCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEC----
Q 004203 153 WVVRFHPLNPTIIAS----GSL-------------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG---- 211 (768)
Q Consensus 153 ~sVafSP~dg~lLaS----gS~-------------DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSd---- 211 (768)
+.+.++| +++++++ |.. .+.|+.||..+++..... .....+.++|+||++.|+++..
T Consensus 134 ~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~ 211 (305)
T 3dr2_A 134 NDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQG 211 (305)
T ss_dssp CCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC--
T ss_pred CCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcC
Confidence 7899999 8888886 332 256888888777665544 4456678999999998877764
Q ss_pred ---CeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEE
Q 004203 212 ---HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLL 252 (768)
Q Consensus 212 ---d~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~Lla 252 (768)
+.|++||+..................+..++++++|+.+++
T Consensus 212 ~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~ 255 (305)
T 3dr2_A 212 HGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS 255 (305)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC
T ss_pred CCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe
Confidence 35999998765421101111112344567899999984443
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.74 E-value=4.5e-07 Score=91.36 Aligned_cols=169 Identities=8% Similarity=0.003 Sum_probs=112.7
Q ss_pred cCCCEEE-EEeCCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEe-cCCCCc
Q 004203 79 DARRGLA-SWVEAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH-GHRRTP 152 (768)
Q Consensus 79 d~g~~Lv-Sgs~DgsIrlWd~~t~~L----~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~-gH~g~V 152 (768)
.++...+ +...++.|..|+...... ..+...+.+++++++|+++++.. ++.|++||.++... ..+. .....+
T Consensus 33 ~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p 110 (270)
T 1rwi_B 33 SAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYP 110 (270)
T ss_dssp TTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSE
T ss_pred CCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCC
Confidence 3444444 335678898998765421 23345688999999999666555 88999999876554 3332 233568
Q ss_pred EEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeE
Q 004203 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRI 230 (768)
Q Consensus 153 ~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~ 230 (768)
..+++++ +++++++...++.|.+||..+....... .....+..++++++|+++++.. ++.|.+||........ .
T Consensus 111 ~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~---~ 186 (270)
T 1rwi_B 111 EGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV---L 186 (270)
T ss_dssp EEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE---C
T ss_pred cceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe---e
Confidence 8999999 8888887777889999987665443322 2234678899999998665554 4569999987654322 1
Q ss_pred eecCCCCeEEEEEccCCCeEEEE
Q 004203 231 VLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 231 l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
...+...+..++++++|..+++.
T Consensus 187 ~~~~~~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 187 PFTDITAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp CCSSCCSEEEEEECTTCCEEEEE
T ss_pred cccCCCCceEEEECCCCCEEEEE
Confidence 12233678999999999644443
No 202
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.66 E-value=1e-06 Score=91.97 Aligned_cols=166 Identities=13% Similarity=0.062 Sum_probs=123.3
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCC----CCCC-CCCeEEEEECCCCCEEEEEeC-CCeEEEEeCCCCeEEEEEec-----
Q 004203 79 DARRGLASWVEAESLHHLRPKYCP----LSPP-PRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTGSCLKVLHG----- 147 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~~----L~gH-~~~VtslafSPDG~~LaSgS~-DgtVrVWDl~tg~~l~~l~g----- 147 (768)
.++..++ +.++.|..||. +++ +..+ ...+.++.+.+||+++++.+. ++.|..+|. +|+.+..+..
T Consensus 46 pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~ 121 (276)
T 3no2_A 46 KAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIE 121 (276)
T ss_dssp TTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCS
T ss_pred CCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCC
Confidence 4555555 34667777777 442 2333 346889999999999999888 888888886 6887766642
Q ss_pred -CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEECC-eEEEEEcCCCccc
Q 004203 148 -HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREET 225 (768)
Q Consensus 148 -H~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSdd-~I~IWDl~t~~~~ 225 (768)
+......+.+.+ +++++++...++.|..||.+ |+.+..+........+.+.++|..++++.++ +|..+|..+++..
T Consensus 122 ~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 122 RPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp SGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred cccccccCceECC-CCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 112345567888 99999999999999999998 9999888766667788899999999888865 5999999888764
Q ss_pred cCCeEeecC------CCCeEEEEEccCCCeEEEE
Q 004203 226 SSPRIVLRT------RRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 226 ~~~~~l~~h------~~~V~sVaFSPDG~~LlaS 253 (768)
. .+... -..+..+...++|..+++.
T Consensus 200 w---~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 200 R---RVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp E---EEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred E---EecCCCCCCccccccccceEcCCCCEEEEe
Confidence 4 22211 2347888999999866554
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.62 E-value=4.7e-06 Score=91.02 Aligned_cols=92 Identities=12% Similarity=0.001 Sum_probs=69.2
Q ss_pred eEEEEeCCCCCC----CCCCCCeEEEEECCCCCEEEEEe----------CCCeEEEEeCCCCeEEEEEecC-------CC
Q 004203 92 SLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTH----------GDHTVKIIDCQTGSCLKVLHGH-------RR 150 (768)
Q Consensus 92 sIrlWd~~t~~L----~gH~~~VtslafSPDG~~LaSgS----------~DgtVrVWDl~tg~~l~~l~gH-------~g 150 (768)
.|.++|..+.++ ..-..+ .++|||||++|+++. .++.|.+||..+.+.+..+.-. ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 778888876632 222223 999999999999886 3678999999998887766432 12
Q ss_pred CcEEEEEccCCCCEEEEEeC--CCeEEEEECCCCcEEEE
Q 004203 151 TPWVVRFHPLNPTIIASGSL--DHEVRLWNASTAECIGS 187 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~--DgtVrLWDl~sg~~i~~ 187 (768)
....+.|+| |+++|+.+.. ++.|.++| .+++.+..
T Consensus 126 ~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 126 YSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred CccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 355789999 8888888764 47899999 88877655
No 204
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.62 E-value=7.8e-06 Score=82.84 Aligned_cols=166 Identities=10% Similarity=0.039 Sum_probs=116.3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEe--cCCCCc
Q 004203 80 ARRGLASWVEAESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH--GHRRTP 152 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~L-----~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~--gH~g~V 152 (768)
++...++...++.|..||.. +.+ ..+...+.+++++++|+++++...++.|.+||.+ ++. ..+. .....+
T Consensus 25 ~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~ 101 (299)
T 2z2n_A 25 KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAP 101 (299)
T ss_dssp TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCE
T ss_pred CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCc
Confidence 33433333346788888877 422 2345779999999999988887778999999986 443 3332 345578
Q ss_pred EEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-c-CCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCe
Q 004203 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-D-FYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPR 229 (768)
Q Consensus 153 ~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l-~-h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~ 229 (768)
..+.+.+ ++.++++...++.|.+||. +++..... . ....+..++++++|+++++.. .+.|.+||. +++... .
T Consensus 102 ~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~--~ 176 (299)
T 2z2n_A 102 YGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE--F 176 (299)
T ss_dssp EEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE--E
T ss_pred eeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE--e
Confidence 8999999 8888888777889999999 66554332 2 345789999999998776665 356999998 544321 1
Q ss_pred EeecCCCCeEEEEEccCCCeEEEE
Q 004203 230 IVLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 230 ~l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
........+..++++++|+.+++.
T Consensus 177 ~~~~~~~~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 177 KIPTPASGPVGITKGNDDALWFVE 200 (299)
T ss_dssp ECSSTTCCEEEEEECTTSSEEEEE
T ss_pred eCCCCCCcceeEEECCCCCEEEEc
Confidence 122345678999999999855543
No 205
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.61 E-value=3.6e-06 Score=97.31 Aligned_cols=134 Identities=10% Similarity=0.016 Sum_probs=104.4
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECC--CCcEEEEecCCCCe
Q 004203 117 PDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS--TAECIGSRDFYRPI 194 (768)
Q Consensus 117 PDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~--sg~~i~~l~h~~~V 194 (768)
+++.++++...++.|.++|..+++.+..+.. ...+..+.|+| |++++++++.|+.|.+||+. +++.+..+......
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEA 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCC
Confidence 4455677778899999999999999988874 34577899999 99999999999999999996 78888777766667
Q ss_pred EEEEEc----CCCCEEEEEE--CCeEEEEEcCCCccccCCeEeec--------C-CCCeEEEEEccCCCeEEEE
Q 004203 195 ASIAFH----ASGELLAVAS--GHKLYIWRYNMREETSSPRIVLR--------T-RRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 195 ~svafS----PDG~~LatgS--dd~I~IWDl~t~~~~~~~~~l~~--------h-~~~V~sVaFSPDG~~LlaS 253 (768)
..++|+ |||+++++++ .+.+.++|..+.+.... ....+ | ...+..+.+++++..+++.
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~-i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKI-QSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEE-EECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEE-EeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 889999 7999999888 45699999888765431 11111 1 2267889999988766554
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.61 E-value=3.3e-06 Score=86.84 Aligned_cols=166 Identities=11% Similarity=0.122 Sum_probs=112.6
Q ss_pred CEEEEEeCCCeEEEEeCCCCCC----CC-----CCCCeEEEEECCCCCEEEEEeCC---------------CeEEEEeCC
Q 004203 82 RGLASWVEAESLHHLRPKYCPL----SP-----PPRSTIAAAFSPDGKTLASTHGD---------------HTVKIIDCQ 137 (768)
Q Consensus 82 ~~LvSgs~DgsIrlWd~~t~~L----~g-----H~~~VtslafSPDG~~LaSgS~D---------------gtVrVWDl~ 137 (768)
..|+.+.....|.+||.. +++ .. +...+.+++++++|+++++...+ +.|.+||.+
T Consensus 83 g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 83 NQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp SEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred CcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 455555555578888877 432 11 12358899999999888877665 678888876
Q ss_pred CCeEEEEEecCCCCcEEEEEc----cCCCCEE-EEEeCCCeEEEEECC-CCcEE-----EEec-CC-CCeEEEEEcCCCC
Q 004203 138 TGSCLKVLHGHRRTPWVVRFH----PLNPTII-ASGSLDHEVRLWNAS-TAECI-----GSRD-FY-RPIASIAFHASGE 204 (768)
Q Consensus 138 tg~~l~~l~gH~g~V~sVafS----P~dg~lL-aSgS~DgtVrLWDl~-sg~~i-----~~l~-h~-~~V~svafSPDG~ 204 (768)
++..... .+......++|+ | +++.+ ++...++.|++||+. +++.. ..+. +. .....++++++|+
T Consensus 162 -g~~~~~~-~~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 238 (314)
T 1pjx_A 162 -GQMIQVD-TAFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN 238 (314)
T ss_dssp -SCEEEEE-EEESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC
T ss_pred -CCEEEec-cCCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC
Confidence 6544433 334456889999 9 77554 445567899999986 45421 1222 22 5578899999998
Q ss_pred EEEEEE-CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 205 LLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 205 ~LatgS-dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
++++.. +++|.+||.++++... .+..+...+.+++|+|+|+.|.++.
T Consensus 239 l~v~~~~~~~i~~~d~~~g~~~~---~~~~~~~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 239 LLVANWGSSHIEVFGPDGGQPKM---RIRCPFEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp EEEEEETTTEEEEECTTCBSCSE---EEECSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEcCCCEEEEEcCCCCcEeE---EEeCCCCCceeEEECCCCCEEEEEe
Confidence 777765 5669999987554322 3334457899999999999665554
No 207
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.60 E-value=8.8e-06 Score=82.43 Aligned_cols=167 Identities=11% Similarity=0.033 Sum_probs=116.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEE-EecCCCCcEE
Q 004203 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV-LHGHRRTPWV 154 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~-l~gH~g~V~s 154 (768)
++...++...++.|..|+.... .+......+.+++++++|+++++...++.|.+||. +++.... +..+...+..
T Consensus 67 ~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~ 145 (299)
T 2z2n_A 67 DGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSF 145 (299)
T ss_dssp TSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred CCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCce
Confidence 4444444444678888887522 12234567999999999988888778899999998 6654433 2334567889
Q ss_pred EEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE-ec-CCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEe
Q 004203 155 VRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-RD-FYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIV 231 (768)
Q Consensus 155 VafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~-l~-h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l 231 (768)
+++.+ +++++++...++.|..||. +++.... .. ....+..++++++|+++++.. ++.|.+||. ++.... ...
T Consensus 146 i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~~ 220 (299)
T 2z2n_A 146 ITLGS-DNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE--FKI 220 (299)
T ss_dssp EEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE--EEC
T ss_pred EEEcC-CCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE--EEC
Confidence 99999 7888887777889999999 7665543 22 345688999999998665554 456999998 544321 112
Q ss_pred ecCCCCeEEEEEccCCCeEEE
Q 004203 232 LRTRRSLRAVHFHPHAAPLLL 252 (768)
Q Consensus 232 ~~h~~~V~sVaFSPDG~~Lla 252 (768)
......+.+++++++|+.+++
T Consensus 221 ~~~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 221 PTPNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp SSTTCCEEEEEECSTTCEEEE
T ss_pred CCCCCCceeEEECCCCCEEEe
Confidence 234567999999999985544
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.50 E-value=1.4e-05 Score=83.13 Aligned_cols=175 Identities=11% Similarity=0.053 Sum_probs=114.3
Q ss_pred EecCCCEEEEEeCCCeEEEEeCCCCCCC---C-----CCCCeEEEEECCCCCEEEEEeC-----------CCeEEEEeCC
Q 004203 77 GRDARRGLASWVEAESLHHLRPKYCPLS---P-----PPRSTIAAAFSPDGKTLASTHG-----------DHTVKIIDCQ 137 (768)
Q Consensus 77 ~~d~g~~LvSgs~DgsIrlWd~~t~~L~---g-----H~~~VtslafSPDG~~LaSgS~-----------DgtVrVWDl~ 137 (768)
...++. ++.+. +..|.+||.+++++. . ....+++++++|+|+++++... .+.|+.+|..
T Consensus 61 ~~~dG~-l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~ 138 (297)
T 3g4e_A 61 LRQSGG-YVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD 138 (297)
T ss_dssp EBTTSS-EEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT
T ss_pred ECCCCC-EEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC
Confidence 334444 44444 567889998766321 1 1234889999999997665432 2345555543
Q ss_pred CCeEEEEEecCCCCcEEEEEccCCCCEE-EEEeCCCeEEEEEC--CCCcEE--EEe---c-CCCCeEEEEEcCCCCEEEE
Q 004203 138 TGSCLKVLHGHRRTPWVVRFHPLNPTII-ASGSLDHEVRLWNA--STAECI--GSR---D-FYRPIASIAFHASGELLAV 208 (768)
Q Consensus 138 tg~~l~~l~gH~g~V~sVafSP~dg~lL-aSgS~DgtVrLWDl--~sg~~i--~~l---~-h~~~V~svafSPDG~~Lat 208 (768)
++... +..+....+.++|+| +++.+ ++.+.++.|.+||+ .+++.. +.+ . .......++++++|.+.++
T Consensus 139 -g~~~~-~~~~~~~pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva 215 (297)
T 3g4e_A 139 -HHVKK-YFDQVDISNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVA 215 (297)
T ss_dssp -SCEEE-EEEEESBEEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEE
T ss_pred -CCEEE-EeeccccccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEE
Confidence 44333 333344567899999 77655 55666789999997 456542 112 1 2356788999999987666
Q ss_pred EEC-CeEEEEEcCCCccccCCeEeecCCCCeEEEEEc-cCCCeEEEEEeeCCc
Q 004203 209 ASG-HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFH-PHAAPLLLTAEVNDL 259 (768)
Q Consensus 209 gSd-d~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFS-PDG~~LlaS~svwdl 259 (768)
... +.|.+||..+++... .+..+...+++++|. ||++.|.+++....+
T Consensus 216 ~~~~~~v~~~d~~tG~~~~---~i~~p~~~~t~~~f~g~d~~~L~vt~~~~~~ 265 (297)
T 3g4e_A 216 CYNGGRVIRLDPVTGKRLQ---TVKLPVDKTTSCCFGGKNYSEMYVTCARDGM 265 (297)
T ss_dssp EETTTEEEEECTTTCCEEE---EEECSSSBEEEEEEESGGGCEEEEEEBCTTC
T ss_pred EcCCCEEEEEcCCCceEEE---EEECCCCCceEEEEeCCCCCEEEEEcCCcCC
Confidence 654 459999998776533 344455789999998 899988777764443
No 209
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.48 E-value=1.3e-05 Score=89.66 Aligned_cols=97 Identities=10% Similarity=0.019 Sum_probs=75.4
Q ss_pred CeEEEEeCCCCCC----CCCCCCeEEEEECCCCCEEEEEe----------CCCeEEEEeCCCCeEEEEEecC-------C
Q 004203 91 ESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTH----------GDHTVKIIDCQTGSCLKVLHGH-------R 149 (768)
Q Consensus 91 gsIrlWd~~t~~L----~gH~~~VtslafSPDG~~LaSgS----------~DgtVrVWDl~tg~~l~~l~gH-------~ 149 (768)
+.|.++|..+.++ ..-..+ .++++|||++|+++. .++.|.++|..+++.+..+.-. .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 6899999887732 212234 899999999999886 4678999999999988877522 2
Q ss_pred CCcEEEEEccCCCCEEEEEeC--CCeEEEEECCCCcEEEEecC
Q 004203 150 RTPWVVRFHPLNPTIIASGSL--DHEVRLWNASTAECIGSRDF 190 (768)
Q Consensus 150 g~V~sVafSP~dg~lLaSgS~--DgtVrLWDl~sg~~i~~l~h 190 (768)
.....+.|+| |+++++.+.. ++.|.+.|+.+++.+..+..
T Consensus 177 ~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 177 TYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp CCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 3456789999 8888888764 57899999999998877654
No 210
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.46 E-value=4.8e-05 Score=81.01 Aligned_cols=148 Identities=9% Similarity=-0.019 Sum_probs=101.2
Q ss_pred CCCCCeEEEEECCCCCEEEEEeC-----CCeEEEEeCCCCeEEEEEecC------CCCcEEEEEccCCCCEEEEEe---C
Q 004203 105 PPPRSTIAAAFSPDGKTLASTHG-----DHTVKIIDCQTGSCLKVLHGH------RRTPWVVRFHPLNPTIIASGS---L 170 (768)
Q Consensus 105 gH~~~VtslafSPDG~~LaSgS~-----DgtVrVWDl~tg~~l~~l~gH------~g~V~sVafSP~dg~lLaSgS---~ 170 (768)
+|-..+.+++|+++|+++++-.. +..|.+||+++++.+..+... ...+..++++++++..+++-. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 46678999999999887665544 579999999999977766532 234688999984455556655 6
Q ss_pred CCeEEEEECCCCcEEEEecC------------------------------CCCeEEEEEcCCCCEEEEEECC--eEEEEE
Q 004203 171 DHEVRLWNASTAECIGSRDF------------------------------YRPIASIAFHASGELLAVASGH--KLYIWR 218 (768)
Q Consensus 171 DgtVrLWDl~sg~~i~~l~h------------------------------~~~V~svafSPDG~~LatgSdd--~I~IWD 218 (768)
++.|.+||+.+++..+.+.. ...+..++|+|||+.|+++... +++.++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 78999999998876665421 0235789999999999888743 366665
Q ss_pred cCC---Cc----cccCCeEeecCCCCeEEEEEccCCCeEEE
Q 004203 219 YNM---RE----ETSSPRIVLRTRRSLRAVHFHPHAAPLLL 252 (768)
Q Consensus 219 l~t---~~----~~~~~~~l~~h~~~V~sVaFSPDG~~Lla 252 (768)
... .. .....+...++......++++++|..+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va 264 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVG 264 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEE
T ss_pred HHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEE
Confidence 431 11 00001122334456678999999985554
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.45 E-value=4.2e-05 Score=77.39 Aligned_cols=167 Identities=10% Similarity=0.013 Sum_probs=115.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC-----CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEE-EEecCCCCcE
Q 004203 80 ARRGLASWVEAESLHHLRPKYCP-----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK-VLHGHRRTPW 153 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~-----L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~-~l~gH~g~V~ 153 (768)
++...++...++.|..|+.. ++ +..+...+.+++++++|+++++...++.|.+||.+ ++... .+......+.
T Consensus 30 ~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~ 107 (300)
T 2qc5_A 30 DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPY 107 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEE
T ss_pred CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCc
Confidence 34444444457788888877 42 22344679999999999988877778999999988 65432 2222346688
Q ss_pred EEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE-ec-CCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeE
Q 004203 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-RD-FYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRI 230 (768)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~-l~-h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~ 230 (768)
.+++.+ +++++++...++.|..||.. ++.... +. ....+..++++++|++.++.. ++.|.+||. +++... ..
T Consensus 108 ~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~ 182 (300)
T 2qc5_A 108 GITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE--YP 182 (300)
T ss_dssp EEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE--EE
T ss_pred cceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE--ee
Confidence 999998 88888877778899999987 655433 22 345788999999999555544 456999998 443221 12
Q ss_pred eecCCCCeEEEEEccCCCeEEEE
Q 004203 231 VLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 231 l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
.......+..++++++|..+++.
T Consensus 183 ~~~~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 183 LPTNAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp CSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCCCCCCcceEEECCCCCEEEEc
Confidence 22344678999999999855543
No 212
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.45 E-value=1.4e-05 Score=89.77 Aligned_cols=175 Identities=11% Similarity=0.097 Sum_probs=117.9
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCCC--CCC-------------CCCeEEEEECCCCCEEEEEeCC------CeEEEEeCC
Q 004203 79 DARRGLASWVEAESLHHLRPKYCPL--SPP-------------PRSTIAAAFSPDGKTLASTHGD------HTVKIIDCQ 137 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~~L--~gH-------------~~~VtslafSPDG~~LaSgS~D------gtVrVWDl~ 137 (768)
+.+..++.+..+..|.++|..+... +-+ ...-..+..+||| +++++..+ +.|.++|.+
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 4455566777888999999865411 100 1123556789999 77777666 789999999
Q ss_pred CCeEEEEEecCCC---CcEEEEEccCCCCEEEEEe-------------------CCCeEEEEECCCCcEEEEecCC---C
Q 004203 138 TGSCLKVLHGHRR---TPWVVRFHPLNPTIIASGS-------------------LDHEVRLWNASTAECIGSRDFY---R 192 (768)
Q Consensus 138 tg~~l~~l~gH~g---~V~sVafSP~dg~lLaSgS-------------------~DgtVrLWDl~sg~~i~~l~h~---~ 192 (768)
+++.+..+....+ --+.+-|+| +++.+++.. .+.+|.+||+.+++.+.++... .
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCeEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 9999988863322 244578899 888888874 3679999999999888877653 2
Q ss_pred CeEEEEE--cCCCCEEEEEEC-----C--eEEEEEcCCCccccCCe------Eeec-----------CCCCeEEEEEccC
Q 004203 193 PIASIAF--HASGELLAVASG-----H--KLYIWRYNMREETSSPR------IVLR-----------TRRSLRAVHFHPH 246 (768)
Q Consensus 193 ~V~svaf--SPDG~~LatgSd-----d--~I~IWDl~t~~~~~~~~------~l~~-----------h~~~V~sVaFSPD 246 (768)
....+.| +|+++++++++. . .|.+|..+.+....... .... .......|.+|||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 2334545 999998887774 3 37776665432111000 0000 0245788999999
Q ss_pred CCeEEEEEe
Q 004203 247 AAPLLLTAE 255 (768)
Q Consensus 247 G~~LlaS~s 255 (768)
|++|.++..
T Consensus 332 GrfLYVSnr 340 (462)
T 2ece_A 332 DKFLYLSLW 340 (462)
T ss_dssp SCEEEEEET
T ss_pred CCEEEEEeC
Confidence 998887764
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.44 E-value=1.5e-06 Score=96.03 Aligned_cols=119 Identities=12% Similarity=0.001 Sum_probs=96.3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEE
Q 004203 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~----~L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sV 155 (768)
++..|+.+ .++.|++||.... .+..|...|.++.+.+. .+++++.||.|.+||+++++... +...|.++
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v 168 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSF 168 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEE
T ss_pred CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEE
Confidence 66777777 8899999998654 24467778999888764 38899999999999999887654 33579999
Q ss_pred EEccCCCCEEEEEeCCCeEEEEECCCCcE--EEEe----------cCCCCeEEEEEcCCCCEEEE
Q 004203 156 RFHPLNPTIIASGSLDHEVRLWNASTAEC--IGSR----------DFYRPIASIAFHASGELLAV 208 (768)
Q Consensus 156 afSP~dg~lLaSgS~DgtVrLWDl~sg~~--i~~l----------~h~~~V~svafSPDG~~Lat 208 (768)
+||| +| ++.|..||++++|+...++. .+++ +|...|.++.|.+++.+|++
T Consensus 169 ~WSp-kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 169 DVTN-SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EECS-SE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcC-Cc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9999 66 67899999999999988775 5555 25678999999999988875
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.44 E-value=9.3e-06 Score=89.61 Aligned_cols=170 Identities=9% Similarity=-0.027 Sum_probs=112.2
Q ss_pred EEecCCCEEEEEeCCCeEEEEeCCCCCCC---CCCCCeEEEEECCCCCEEEEEeCCC--eEEEEeCCCCeEEEEE----e
Q 004203 76 AGRDARRGLASWVEAESLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLASTHGDH--TVKIIDCQTGSCLKVL----H 146 (768)
Q Consensus 76 a~~d~g~~LvSgs~DgsIrlWd~~t~~L~---gH~~~VtslafSPDG~~LaSgS~Dg--tVrVWDl~tg~~l~~l----~ 146 (768)
+...++..+++...++.|+.||..++.+. ....... ++|+++++.|+++..++ .|.+||..++.....+ .
T Consensus 137 a~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~ 215 (409)
T 3hrp_A 137 AAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGS 215 (409)
T ss_dssp EECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCT
T ss_pred EEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccc
Confidence 33344555555556789999999876321 1122233 99999999999998866 8999998776554444 2
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE----e-cCCCC--eEEEEEcCCCCEEEEEE--CCeEEEE
Q 004203 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS----R-DFYRP--IASIAFHASGELLAVAS--GHKLYIW 217 (768)
Q Consensus 147 gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~----l-~h~~~--V~svafSPDG~~LatgS--dd~I~IW 217 (768)
.....++.++++|+++. |+.+..++.|+.||..++..... . ..... ...++|+|++..|+++. .+.|++|
T Consensus 216 ~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~ 294 (409)
T 3hrp_A 216 TFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKI 294 (409)
T ss_dssp TSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred hhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEE
Confidence 24566888999994454 44477788999999988764332 1 11111 23899999766666665 3459999
Q ss_pred EcCCCccccCCeEeecC---------------CCCeEEEEEccCCCeEEE
Q 004203 218 RYNMREETSSPRIVLRT---------------RRSLRAVHFHPHAAPLLL 252 (768)
Q Consensus 218 Dl~t~~~~~~~~~l~~h---------------~~~V~sVaFSPDG~~Lla 252 (768)
|.+.... .+.++ -.....++|+|+|+.+++
T Consensus 295 ~~~g~~~-----~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 295 TPDGECE-----WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp CTTCCEE-----EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred ecCCCEE-----EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 8765421 22222 245889999999995544
No 215
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.42 E-value=5.7e-05 Score=76.41 Aligned_cols=167 Identities=10% Similarity=0.027 Sum_probs=115.3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC-----CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEE-EecCCCCcE
Q 004203 80 ARRGLASWVEAESLHHLRPKYCP-----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV-LHGHRRTPW 153 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~-----L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~-l~gH~g~V~ 153 (768)
++...++...++.|..+|.. ++ +......+.+++++++|+++++...++.|.+||.+ ++.... +......+.
T Consensus 72 ~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~ 149 (300)
T 2qc5_A 72 LGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPA 149 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEE
T ss_pred CCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCce
Confidence 34444444446788888877 42 22244679999999999988877778899999987 655432 333456788
Q ss_pred EEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe--cCCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCccccCCeE
Q 004203 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASG-HKLYIWRYNMREETSSPRI 230 (768)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l--~h~~~V~svafSPDG~~LatgSd-d~I~IWDl~t~~~~~~~~~ 230 (768)
.+++.+ +++++++...++.|..||. +++..... .....+..++++++|.+.++... +.|.+||. +++... ..
T Consensus 150 ~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~--~~ 224 (300)
T 2qc5_A 150 FITLGS-DNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE--YD 224 (300)
T ss_dssp EEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE--EE
T ss_pred eEEECC-CCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE--EE
Confidence 999999 8887777666789999998 56554422 23356889999999986665544 45999998 333211 11
Q ss_pred eecCCCCeEEEEEccCCCeEEEE
Q 004203 231 VLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 231 l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
.......+.+++++++|+.+++.
T Consensus 225 ~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 225 IPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp CSSTTCCEEEEEECSTTCEEEEE
T ss_pred CCCCCCCceEEEECCCCCEEEec
Confidence 22345678999999999855443
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.40 E-value=2.1e-05 Score=86.70 Aligned_cols=169 Identities=9% Similarity=-0.048 Sum_probs=112.1
Q ss_pred cCCCEEEEEeCCC--eEEEEeCCCCC----C----CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEE----
Q 004203 79 DARRGLASWVEAE--SLHHLRPKYCP----L----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV---- 144 (768)
Q Consensus 79 d~g~~LvSgs~Dg--sIrlWd~~t~~----L----~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~---- 144 (768)
..+..|+....++ .|..|+..... + ..+...+.+++++|++..|+.+..++.|++||.+++.....
T Consensus 180 ~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~ 259 (409)
T 3hrp_A 180 KDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLE 259 (409)
T ss_dssp TTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECC
T ss_pred cCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEeccc
Confidence 4455666666655 78888776432 1 22456788999999666666677789999999988764333
Q ss_pred EecCCCCc-E-EEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC---------------CCeEEEEEcCCCCEEE
Q 004203 145 LHGHRRTP-W-VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY---------------RPIASIAFHASGELLA 207 (768)
Q Consensus 145 l~gH~g~V-~-sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~---------------~~V~svafSPDG~~La 207 (768)
..++.+.- . .++|+|+++.++++-..++.|+.||.... .....++. .....++|+|+|++++
T Consensus 260 ~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyv 338 (409)
T 3hrp_A 260 LSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYI 338 (409)
T ss_dssp CCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEE
T ss_pred ccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEE
Confidence 22333322 3 89999955777777777889999998643 32222221 3467899999999655
Q ss_pred EEE-C-CeEEEEEcCCCccccCCeEeecC---------------CCCeEEEEEccCCCeEEE
Q 004203 208 VAS-G-HKLYIWRYNMREETSSPRIVLRT---------------RRSLRAVHFHPHAAPLLL 252 (768)
Q Consensus 208 tgS-d-d~I~IWDl~t~~~~~~~~~l~~h---------------~~~V~sVaFSPDG~~Lla 252 (768)
+-+ . +.|++||+.++... .+.++ -.....++++++|..+++
T Consensus 339 ad~~~~~~I~~~~~~~G~v~----~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVa 396 (409)
T 3hrp_A 339 VDGFKGYCLRKLDILDGYVS----TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIA 396 (409)
T ss_dssp EETTTTCEEEEEETTTTEEE----EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEE
T ss_pred EeCCCCCEEEEEECCCCEEE----EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEE
Confidence 554 3 34999997666432 22222 246899999999764443
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.38 E-value=1.7e-05 Score=87.66 Aligned_cols=177 Identities=14% Similarity=0.091 Sum_probs=112.9
Q ss_pred EEEecCCCEEEEEe----------CCCeEEEEeCCCCCCCC-----C------CCCeEEEEECCCCCEEEEEeC--CCeE
Q 004203 75 EAGRDARRGLASWV----------EAESLHHLRPKYCPLSP-----P------PRSTIAAAFSPDGKTLASTHG--DHTV 131 (768)
Q Consensus 75 ~a~~d~g~~LvSgs----------~DgsIrlWd~~t~~L~g-----H------~~~VtslafSPDG~~LaSgS~--DgtV 131 (768)
.+...+++.++... .++.|.+||..+.+... . ...-..++|+|||++++++.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 44445565555443 46789999998874221 1 124567999999999998864 6899
Q ss_pred EEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCC-CcEEEEe-cC----CCCe-EEEEEc-CCC
Q 004203 132 KIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST-AECIGSR-DF----YRPI-ASIAFH-ASG 203 (768)
Q Consensus 132 rVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~s-g~~i~~l-~h----~~~V-~svafS-PDG 203 (768)
.++|+.+++.+..+.-.. . ..+.|.+.+.+++.+.||.+.+.++.+ ++..... .. ..++ ....|. ++|
T Consensus 163 sVID~~t~~vv~tI~v~g--~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPD--C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred EEEECCCCcEEEEEECCC--c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 999999999998886432 1 223343667788889999999999986 5543321 11 1122 124664 688
Q ss_pred CEEEEEECCeEEEEEcCCCccc-cCCeEeec--------CCCCeEEEEEccCCCeEEEEEe
Q 004203 204 ELLAVASGHKLYIWRYNMREET-SSPRIVLR--------TRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 204 ~~LatgSdd~I~IWDl~t~~~~-~~~~~l~~--------h~~~V~sVaFSPDG~~LlaS~s 255 (768)
+++++..++.+++.|+.+.... ..+..+.. .......+.++|+++.+.....
T Consensus 239 ~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~ 299 (386)
T 3sjl_D 239 RLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVD 299 (386)
T ss_dssp EEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEE
T ss_pred cEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEec
Confidence 7666555677999999766421 11111000 1223445778999987776643
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.37 E-value=3.5e-05 Score=81.62 Aligned_cols=168 Identities=13% Similarity=0.114 Sum_probs=108.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCCC---C----C-CCCeEEEEECCCCCEEEEEeC------CCeEEEEeCCCCeEEEEE
Q 004203 80 ARRGLASWVEAESLHHLRPKYCPLS---P----P-PRSTIAAAFSPDGKTLASTHG------DHTVKIIDCQTGSCLKVL 145 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~L~---g----H-~~~VtslafSPDG~~LaSgS~------DgtVrVWDl~tg~~l~~l 145 (768)
++..++ +.. ..|.+||..++++. . . ...+.+++++|+|+++++... .+.|+.+| +++.....
T Consensus 100 dg~l~v-~~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~ 175 (326)
T 2ghs_A 100 DSKQLI-ASD-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF 175 (326)
T ss_dssp TTEEEE-EET-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE
T ss_pred CCeEEE-EEC-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee
Confidence 444444 444 34888998766421 1 1 235899999999997765543 25677777 56544332
Q ss_pred ecCCCCcEEEEEccCCCCEEE-EEeCCCeEEEEECC--CC-cE-----EEEec-CCCCeEEEEEcCCCCEEEEEE-CCeE
Q 004203 146 HGHRRTPWVVRFHPLNPTIIA-SGSLDHEVRLWNAS--TA-EC-----IGSRD-FYRPIASIAFHASGELLAVAS-GHKL 214 (768)
Q Consensus 146 ~gH~g~V~sVafSP~dg~lLa-SgS~DgtVrLWDl~--sg-~~-----i~~l~-h~~~V~svafSPDG~~LatgS-dd~I 214 (768)
.+......++|+| +++.++ +.+.++.|++||+. ++ +. ...+. .......++++++|.+.++.. +++|
T Consensus 176 -~~~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v 253 (326)
T 2ghs_A 176 -ADISIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAV 253 (326)
T ss_dssp -EEESSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEE
T ss_pred -CCCcccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEE
Confidence 3334577899999 776554 44567899999986 55 32 21222 234567899999998766655 4669
Q ss_pred EEEEcCCCccccCCeEeecCCCCeEEEEEc-cCCCeEEEEEeeC
Q 004203 215 YIWRYNMREETSSPRIVLRTRRSLRAVHFH-PHAAPLLLTAEVN 257 (768)
Q Consensus 215 ~IWDl~t~~~~~~~~~l~~h~~~V~sVaFS-PDG~~LlaS~svw 257 (768)
.+||.. ++... .+..+...+.+++|+ |+++.|+++....
T Consensus 254 ~~~d~~-g~~~~---~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 254 DRYDTD-GNHIA---RYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEECTT-CCEEE---EEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred EEECCC-CCEEE---EEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 999983 43322 333445679999998 8988777666533
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.30 E-value=0.00023 Score=77.54 Aligned_cols=108 Identities=14% Similarity=-0.033 Sum_probs=82.9
Q ss_pred EECCCCCEEEEEeC--CC---eEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEe----------CCCeEEEEE
Q 004203 114 AFSPDGKTLASTHG--DH---TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS----------LDHEVRLWN 178 (768)
Q Consensus 114 afSPDG~~LaSgS~--Dg---tVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS----------~DgtVrLWD 178 (768)
...|+++++++... .. +|.+||..+++.+..+.....+ .+.++| |+++++.+. .++.|.+||
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECC-CCCEEEEEeccccccccCCCCCeEEEEE
Confidence 44578888887764 22 8999999999988888654443 899999 888877765 367899999
Q ss_pred CCCCcEEEEecCC--------CCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccc
Q 004203 179 ASTAECIGSRDFY--------RPIASIAFHASGELLAVASG---HKLYIWRYNMREET 225 (768)
Q Consensus 179 l~sg~~i~~l~h~--------~~V~svafSPDG~~LatgSd---d~I~IWDl~t~~~~ 225 (768)
..+.+.+..+... .....++|+|||++|++++. +.|.++| .+++..
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD 160 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE
Confidence 9998887765432 23457899999999998873 4499999 887653
No 220
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.22 E-value=1.1e-05 Score=89.22 Aligned_cols=139 Identities=11% Similarity=-0.000 Sum_probs=99.9
Q ss_pred EEEECCCCCEEEEEeC-----CCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEe----------CCCeEEE
Q 004203 112 AAAFSPDGKTLASTHG-----DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS----------LDHEVRL 176 (768)
Q Consensus 112 slafSPDG~~LaSgS~-----DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS----------~DgtVrL 176 (768)
.....||++.+++... ++.|.++|..+++.+..+..-..+ . +.++| |+++++.+. .++.|.+
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~sp-DG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVAD-DGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECT-TSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECC-CCCEEEEEcccccccccCCCCCEEEE
Confidence 3556789999998866 679999999999999988754444 4 99999 777666654 4678999
Q ss_pred EECCCCcEEEEecCC--------CCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEeecC-----CCCeEE
Q 004203 177 WNASTAECIGSRDFY--------RPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRT-----RRSLRA 240 (768)
Q Consensus 177 WDl~sg~~i~~l~h~--------~~V~svafSPDG~~LatgSd---d~I~IWDl~t~~~~~~~~~l~~h-----~~~V~s 240 (768)
||..+.+.+..+... .....++|+|||++|+++.. +.|.++|+.+.+..... .+.+. ...-..
T Consensus 114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI-~v~g~~~~~P~g~~~~ 192 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML-DVPDCYHIFPTAPDTF 192 (386)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE-ECCSEEEEEEEETTEE
T ss_pred EECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE-ECCCcceeecCCCcee
Confidence 999999988876432 24557999999999998862 45999999998764411 11000 011122
Q ss_pred EEEccCCCeEEEEE
Q 004203 241 VHFHPHAAPLLLTA 254 (768)
Q Consensus 241 VaFSPDG~~LlaS~ 254 (768)
+..++||+.++...
T Consensus 193 ~~~~~DG~~~~v~~ 206 (386)
T 3sjl_D 193 FMHCRDGSLAKVAF 206 (386)
T ss_dssp EEEETTSCEEEEEC
T ss_pred EEECCCCCEEEEEC
Confidence 46778887655543
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.21 E-value=5.3e-05 Score=80.68 Aligned_cols=164 Identities=9% Similarity=-0.028 Sum_probs=105.7
Q ss_pred CCeEEEEeCCCCCC----------CCCCCCeEEEEECCCCCEEE-EEe---CCCeEEEEeCCCCeEEEEEecCC------
Q 004203 90 AESLHHLRPKYCPL----------SPPPRSTIAAAFSPDGKTLA-STH---GDHTVKIIDCQTGSCLKVLHGHR------ 149 (768)
Q Consensus 90 DgsIrlWd~~t~~L----------~gH~~~VtslafSPDG~~La-SgS---~DgtVrVWDl~tg~~l~~l~gH~------ 149 (768)
+..|.+||..++++ ..+...+..+++++++..++ +-. .++.|++||+.+++..+.+.+|.
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence 46788888776531 12334578999998655554 444 67899999999888777664431
Q ss_pred -----------------------CCcEEEEEccCCCCEEEEEeCCC-eEEEEECC---CCc--------EEEEecCCCCe
Q 004203 150 -----------------------RTPWVVRFHPLNPTIIASGSLDH-EVRLWNAS---TAE--------CIGSRDFYRPI 194 (768)
Q Consensus 150 -----------------------g~V~sVafSP~dg~lLaSgS~Dg-tVrLWDl~---sg~--------~i~~l~h~~~V 194 (768)
..+..++|+| +++.|+++..++ .|+.+|.. .+. .+...++....
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~p 250 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPIC 250 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSC
T ss_pred cceeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCC
Confidence 1257799999 888888877666 55555432 111 01122334456
Q ss_pred EEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEee
Q 004203 195 ASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEV 256 (768)
Q Consensus 195 ~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~sv 256 (768)
..++++++|.++++.. ++.|.+||..+++... .........+.+++|.++|+.++++...
T Consensus 251 dgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~--~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 251 DGISIDKDHNIYVGDLAHSAIGVITSADRAYKL--LVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp SCEEECTTCCEEEEEGGGTEEEEEETTTTEEEE--EEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred ceEEECCCCCEEEEccCCCeEEEEECCCCCEEE--EEECCceecCCeeEECCCCcEEEEeCcc
Confidence 6799999998777666 4569999984443211 1111124568999999999866665543
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.21 E-value=3.7e-05 Score=86.35 Aligned_cols=164 Identities=9% Similarity=0.005 Sum_probs=109.5
Q ss_pred CeEEEEeCCCCCCC------CCC-CCeEEEEECCCCCEEEEEe-------------------CCCeEEEEeCCCCeEEEE
Q 004203 91 ESLHHLRPKYCPLS------PPP-RSTIAAAFSPDGKTLASTH-------------------GDHTVKIIDCQTGSCLKV 144 (768)
Q Consensus 91 gsIrlWd~~t~~L~------gH~-~~VtslafSPDG~~LaSgS-------------------~DgtVrVWDl~tg~~l~~ 144 (768)
+.|.+.|.++.++. ... .--..+-|+|+++.+++.. .+.+|.+||+.+++.+..
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~t 243 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHS 243 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeE
Confidence 67888998866322 122 2245688999999998885 368999999999988887
Q ss_pred EecC--CCCcEEEEE--ccCCCCEEEEEe------CCCeEEEEECCCCcEE--EEe--cC-----------------CCC
Q 004203 145 LHGH--RRTPWVVRF--HPLNPTIIASGS------LDHEVRLWNASTAECI--GSR--DF-----------------YRP 193 (768)
Q Consensus 145 l~gH--~g~V~sVaf--SP~dg~lLaSgS------~DgtVrLWDl~sg~~i--~~l--~h-----------------~~~ 193 (768)
+.-- ......+.| +| ++++++.++ .+++|.+|....++.. ..+ .. ...
T Consensus 244 I~vg~~g~~P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~ 322 (462)
T 2ece_A 244 LTLGEENRMALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPL 322 (462)
T ss_dssp EESCTTEEEEEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCC
T ss_pred EecCCCCCccceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCc
Confidence 7642 123455666 99 777776665 5668888776554321 111 10 245
Q ss_pred eEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCeEeecC-C-------------CCeEEEEEccCCCeEEEEEe
Q 004203 194 IASIAFHASGELLAVASG--HKLYIWRYNMREETSSPRIVLRT-R-------------RSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 194 V~svafSPDG~~LatgSd--d~I~IWDl~t~~~~~~~~~l~~h-~-------------~~V~sVaFSPDG~~LlaS~s 255 (768)
...+.+++||++|+++.. +.|.+||+...........+... . ...+.+.++|||++|+++.+
T Consensus 323 pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNs 400 (462)
T 2ece_A 323 VTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNS 400 (462)
T ss_dssp CCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECC
T ss_pred eeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcC
Confidence 678999999999999984 45999998643221101111111 0 13688999999999888875
No 223
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.20 E-value=4.7e-05 Score=80.00 Aligned_cols=172 Identities=8% Similarity=0.012 Sum_probs=118.6
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCCCC--CCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCCCCeEEEEEecCCCCcEEEE
Q 004203 80 ARRGLASWVEAESLHHLRPKYCPLSP--PPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQTGSCLKVLHGHRRTPWVVR 156 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~L~g--H~~~VtslafSPDG~~LaSgS-~DgtVrVWDl~tg~~l~~l~gH~g~V~sVa 156 (768)
++...++.+.++.|+.+|++++++.. -..........++++.|+... .++.+.+||.++.+.+..+... ..-+.++
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt 142 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGLC 142 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCEE
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEEe
Confidence 46666777888899999999885432 122333322233455555554 5889999999999999998753 2234455
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC------CCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCccccCC
Q 004203 157 FHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY------RPIASIAFHASGELLAVAS--GHKLYIWRYNMREETSSP 228 (768)
Q Consensus 157 fSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~------~~V~svafSPDG~~LatgS--dd~I~IWDl~t~~~~~~~ 228 (768)
+ +++.|+.+..++.|+++|.++.+.+..+... ..++.+.|. +|+ |.+.. .+.|.+.|.++++....
T Consensus 143 --~-Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~I~vIDp~TG~V~~~- 216 (268)
T 3nok_A 143 --Y-WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-IYANIWHSSDVLEIDPATGTVVGV- 216 (268)
T ss_dssp --E-ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTCSEEEEECTTTCBEEEE-
T ss_pred --c-CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEECCCCeEEEEeCCCCcEEEE-
Confidence 4 5666666667889999999999988876421 245678887 775 44444 45699999999876441
Q ss_pred eEee-----------cCCCCeEEEEEccCCCeEEEEEeeCC
Q 004203 229 RIVL-----------RTRRSLRAVHFHPHAAPLLLTAEVND 258 (768)
Q Consensus 229 ~~l~-----------~h~~~V~sVaFSPDG~~LlaS~svwd 258 (768)
..+. ....-.+.|+|+|+++.|++++..|.
T Consensus 217 Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp 257 (268)
T 3nok_A 217 IDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWP 257 (268)
T ss_dssp EECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCS
T ss_pred EECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCC
Confidence 1111 11246799999999999999998774
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.19 E-value=1.9e-05 Score=82.40 Aligned_cols=139 Identities=9% Similarity=0.019 Sum_probs=98.8
Q ss_pred CCCeEEEEECCCCC-EEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEE
Q 004203 107 PRSTIAAAFSPDGK-TLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI 185 (768)
Q Consensus 107 ~~~VtslafSPDG~-~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i 185 (768)
.....+..|+|+|+ ++++...++.|.+|+. +++ ...+..+...+..+.+++ +++++++...++.|.+||.. ++..
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQAH 119 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-CCEE
Confidence 34567899999998 5666677899999998 455 455555667789999999 88877766667889999986 5543
Q ss_pred EEecC-----CCCeEEEEEcCCCCEEEE----EE--------------CCeEEEEEcCCCccccCCeEeecCCCCeEEEE
Q 004203 186 GSRDF-----YRPIASIAFHASGELLAV----AS--------------GHKLYIWRYNMREETSSPRIVLRTRRSLRAVH 242 (768)
Q Consensus 186 ~~l~h-----~~~V~svafSPDG~~Lat----gS--------------dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVa 242 (768)
..... ...++.++++|+|+++++ +. .+.|+.||..+++... +. .....+.++
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~----~~-~~~~p~gl~ 194 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR----MA-DLDHPNGLA 194 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE----EE-EESSEEEEE
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE----Ee-cCCCCcceE
Confidence 33221 234678999999998775 32 1347777776655322 22 345678999
Q ss_pred EccCCCeEEEEE
Q 004203 243 FHPHAAPLLLTA 254 (768)
Q Consensus 243 FSPDG~~LlaS~ 254 (768)
|+|||+.|+++.
T Consensus 195 ~spdg~~lyv~~ 206 (305)
T 3dr2_A 195 FSPDEQTLYVSQ 206 (305)
T ss_dssp ECTTSSEEEEEE
T ss_pred EcCCCCEEEEEe
Confidence 999999776654
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.18 E-value=5.9e-05 Score=84.33 Aligned_cols=134 Identities=12% Similarity=-0.030 Sum_probs=97.2
Q ss_pred CCCCEEEEEeCC-----CeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEe----------CCCeEEEEECCC
Q 004203 117 PDGKTLASTHGD-----HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS----------LDHEVRLWNAST 181 (768)
Q Consensus 117 PDG~~LaSgS~D-----gtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS----------~DgtVrLWDl~s 181 (768)
++++++++.... +.|.++|..+++.+..+..-..+ .+.++| |+++++.+. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~Sp-Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAE-DGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECC-CCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 588888777653 69999999999999988754444 799999 777666654 467899999999
Q ss_pred CcEEEEecCC--------CCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEeec-----CCCCeEEEEEcc
Q 004203 182 AECIGSRDFY--------RPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLR-----TRRSLRAVHFHP 245 (768)
Q Consensus 182 g~~i~~l~h~--------~~V~svafSPDG~~LatgSd---d~I~IWDl~t~~~~~~~~~l~~-----h~~~V~sVaFSP 245 (768)
++.+..+... .....++|+|||++|+++.. +.|.++|+.+.+.... ..+.+ ....-..+.+++
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~-I~v~g~~~~~p~g~~~~v~~~~ 237 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRM-LDVPDCYHIFPASPTVFYMNCR 237 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEE-EECCSEEEEEEEETTEEEEEET
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEE-EEcCCceeeccCCCcEEEEEcC
Confidence 9998876532 23457899999999999873 3599999999876441 11100 001123467888
Q ss_pred CCCeEEEEE
Q 004203 246 HAAPLLLTA 254 (768)
Q Consensus 246 DG~~LlaS~ 254 (768)
||+.+++..
T Consensus 238 dG~~~~V~~ 246 (426)
T 3c75_H 238 DGSLARVDF 246 (426)
T ss_dssp TSSEEEEEC
T ss_pred CCCEEEEEC
Confidence 998666554
No 226
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.14 E-value=4.9e-05 Score=79.64 Aligned_cols=173 Identities=8% Similarity=-0.002 Sum_probs=115.1
Q ss_pred CCCEEEEEeCCC--eEEEEeCCCCCCCC---CCCCeEEEEECCCCCEEEEEeC-CCeEEEEeCCCCeEEEEEecCCCCcE
Q 004203 80 ARRGLASWVEAE--SLHHLRPKYCPLSP---PPRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTGSCLKVLHGHRRTPW 153 (768)
Q Consensus 80 ~g~~LvSgs~Dg--sIrlWd~~t~~L~g---H~~~VtslafSPDG~~LaSgS~-DgtVrVWDl~tg~~l~~l~gH~g~V~ 153 (768)
++...++.+.++ .|+.+|++++++.. -..........++++.|+.... ++.+.+||.++.+.+..+.... .-+
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-eG~ 130 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-EGW 130 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CCC
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC-Cce
Confidence 345555666655 89999999884221 1223333333334667766654 8899999999999999887533 223
Q ss_pred EEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC------CCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCccc
Q 004203 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY------RPIASIAFHASGELLAVAS--GHKLYIWRYNMREET 225 (768)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~------~~V~svafSPDG~~LatgS--dd~I~IWDl~t~~~~ 225 (768)
.++ + +++.|+.+..++.|+++|..+.+.+..+... ..++.+.|. +|+ |.+.. ++.|.+.|..+++..
T Consensus 131 glt--~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 131 GLT--H-NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVT 205 (262)
T ss_dssp CEE--E-CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEE
T ss_pred EEe--c-CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEE
Confidence 344 4 5555555555788999999999888876431 345567887 675 44444 456999999998764
Q ss_pred cCCeEee----------cCCCCeEEEEEccCCCeEEEEEeeCCc
Q 004203 226 SSPRIVL----------RTRRSLRAVHFHPHAAPLLLTAEVNDL 259 (768)
Q Consensus 226 ~~~~~l~----------~h~~~V~sVaFSPDG~~LlaS~svwdl 259 (768)
... .+. ....-.+.|+|+|+++.|++++..|.-
T Consensus 206 ~~I-d~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~ 248 (262)
T 3nol_A 206 GII-DLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPK 248 (262)
T ss_dssp EEE-ECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSE
T ss_pred EEE-ECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCc
Confidence 411 110 112456999999999999999987753
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.14 E-value=2.6e-07 Score=100.41 Aligned_cols=140 Identities=11% Similarity=0.006 Sum_probs=75.7
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCC-cE-
Q 004203 80 ARRGLASWVEAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT-PW- 153 (768)
Q Consensus 80 ~g~~LvSgs~DgsIrlWd~~t~~L----~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~-V~- 153 (768)
.+..++.++.|+.|..||..++++ .. +.+.+..+..+++.+++++.|+.|+.||.++|+.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 467788889999999999988742 22 45555556668888888889999999999999887766543211 10
Q ss_pred EEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCcccc
Q 004203 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG-HKLYIWRYNMREETS 226 (768)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSd-d~I~IWDl~t~~~~~ 226 (768)
...+. ++..+++++.|+.|+.||.++|+.+..+..... ..++|++..|++++. +.|+.||.++++...
T Consensus 86 sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 86 SPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp CSCC-------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred CceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 00111 345677888899999999999998877654332 345678888888774 559999999887543
No 228
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.10 E-value=0.00043 Score=82.24 Aligned_cols=225 Identities=11% Similarity=0.034 Sum_probs=126.6
Q ss_pred eEEEEeCCCC-CCC-CCC-CCeEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCeE--EEEEec-CCCCcEEEEEccC
Q 004203 92 SLHHLRPKYC-PLS-PPP-RSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSC--LKVLHG-HRRTPWVVRFHPL 160 (768)
Q Consensus 92 sIrlWd~~t~-~L~-gH~-~~VtslafSPDG~~LaSgS~D-----gtVrVWDl~tg~~--l~~l~g-H~g~V~sVafSP~ 160 (768)
.|.++|+.++ +.. .+- .....++|+|||+.|+....| ..|+++++.+++. ...+.. .......+.|+|
T Consensus 202 ~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp- 280 (751)
T 2xe4_A 202 TIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA- 280 (751)
T ss_dssp EEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT-
T ss_pred EEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC-
Confidence 5999999887 532 111 123468999999988887765 3799999988742 334432 223456789999
Q ss_pred CCCEEEEEeC---CCeEEEEECCCCc--E--EEEec-CCCCeEEEEEcCCCCEEEEEE-CC-----eEEEEEcCCCcccc
Q 004203 161 NPTIIASGSL---DHEVRLWNASTAE--C--IGSRD-FYRPIASIAFHASGELLAVAS-GH-----KLYIWRYNMREETS 226 (768)
Q Consensus 161 dg~lLaSgS~---DgtVrLWDl~sg~--~--i~~l~-h~~~V~svafSPDG~~LatgS-dd-----~I~IWDl~t~~~~~ 226 (768)
|+++|+..+. ...|+++|+.+++ . ..... ......++.|+. |+.|+..+ .+ +|.++|+.+...
T Consensus 281 Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~-- 357 (751)
T 2xe4_A 281 DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSD-- 357 (751)
T ss_dssp TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTC--
T ss_pred CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCccc--
Confidence 8887776553 3479999998762 3 22222 234445555543 56555554 32 277777764311
Q ss_pred CCeE-eecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecC-------CCCC-CCCccc
Q 004203 227 SPRI-VLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGA-------HSSS-HPGLAE 297 (768)
Q Consensus 227 ~~~~-l~~h~~~V~sVaFSPDG~~LlaS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~-------~s~d-~~~L~~ 297 (768)
... +..+...+.--.|++++..|+++....... .+.+.+. ..+. ...+.
T Consensus 358 -~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~--------------------~l~~~dl~~~~~~~~~g~~~~~l~- 415 (751)
T 2xe4_A 358 -WSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLT--------------------RIWTMMADSQDGVFKAGTGLREVV- 415 (751)
T ss_dssp -CCCEEECCCSSEEEEEEEECSSEEEEEEEETTEE--------------------EEEEEECCTTTSCCCTTTCCEECC-
T ss_pred -ceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEE--------------------EEEEEecccccccccCCccceEEC-
Confidence 112 334444333233444566777666432211 1111111 0000 00000
Q ss_pred ccCCCCCCceEEEE------ecCCCEEEEEecCCCCCcceEEeccCCCceeeeec
Q 004203 298 EVPLITPPFLRPSF------VRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLT 346 (768)
Q Consensus 298 ~~~~~slpil~psF------SpDG~rIv~~~~d~~~Gs~~~~~~~~ss~~~rl~~ 346 (768)
. +-......| +.|++.+++...+...+...+..+..+...++|..
T Consensus 416 l----~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~~ 466 (751)
T 2xe4_A 416 M----EEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVKV 466 (751)
T ss_dssp C----CCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEEE
T ss_pred C----CCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEec
Confidence 0 001112233 56888999988888888888888877666555553
No 229
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.08 E-value=0.00011 Score=77.07 Aligned_cols=161 Identities=8% Similarity=-0.010 Sum_probs=108.9
Q ss_pred CCeEEEEeCCCCCCC-----CCCCCeEEEEECCCCCEEEEEeC-CCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCC
Q 004203 90 AESLHHLRPKYCPLS-----PPPRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPT 163 (768)
Q Consensus 90 DgsIrlWd~~t~~L~-----gH~~~VtslafSPDG~~LaSgS~-DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~ 163 (768)
+..|...|..+++.. +.......+++. ++.|+.+.. ++.|.++|.++++.+..+...... ...+++ |++
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~-Dg~ 117 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLAT-DGK 117 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEE-CSS
T ss_pred CCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEE-CCC
Confidence 578999999987422 111222345554 556665554 889999999999999888632122 234556 555
Q ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCC------CCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCccccCCeEeec--
Q 004203 164 IIASGSLDHEVRLWNASTAECIGSRDFY------RPIASIAFHASGELLAVAS--GHKLYIWRYNMREETSSPRIVLR-- 233 (768)
Q Consensus 164 lLaSgS~DgtVrLWDl~sg~~i~~l~h~------~~V~svafSPDG~~LatgS--dd~I~IWDl~t~~~~~~~~~l~~-- 233 (768)
.++.+..++.|.++|..+.+.+..+... ...+.+.|. +| .|++.. ++.|.+.|..+++.... ..+.+
T Consensus 118 ~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~~~-I~~~g~~ 194 (266)
T 2iwa_A 118 ILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLLGW-ILLPNLR 194 (266)
T ss_dssp SEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEEEE-EECHHHH
T ss_pred EEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEEEE-EECCCcc
Confidence 5555557889999999999888776522 246788888 67 455544 45699999999876441 11111
Q ss_pred ---------CCCCeEEEEEccCCCeEEEEEeeCC
Q 004203 234 ---------TRRSLRAVHFHPHAAPLLLTAEVND 258 (768)
Q Consensus 234 ---------h~~~V~sVaFSPDG~~LlaS~svwd 258 (768)
.....+.|+|+|+++.+++++..|+
T Consensus 195 ~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 195 KKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp HHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred cccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 1146799999999999999887553
No 230
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.05 E-value=4e-05 Score=84.05 Aligned_cols=87 Identities=11% Similarity=-0.101 Sum_probs=65.2
Q ss_pred eEEEEeCCCCC----CCCCCCCeEEEEECCCCCEEEEEe----------CCCeEEEEeCCCCeEEEEEecC-------CC
Q 004203 92 SLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTH----------GDHTVKIIDCQTGSCLKVLHGH-------RR 150 (768)
Q Consensus 92 sIrlWd~~t~~----L~gH~~~VtslafSPDG~~LaSgS----------~DgtVrVWDl~tg~~l~~l~gH-------~g 150 (768)
.|.++|..+.+ +..-..+ .+.|+|||++++++. .++.|.+||+.+++.+..+.-. ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 77788887763 2222234 799999999999886 3789999999999999888643 13
Q ss_pred CcEEEEEccCCCCEEEEEeC--CCeEEE--EECCC
Q 004203 151 TPWVVRFHPLNPTIIASGSL--DHEVRL--WNAST 181 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~--DgtVrL--WDl~s 181 (768)
....+.++| |+++++.+.. +..|.+ +|+.+
T Consensus 125 ~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 125 RVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhh
Confidence 466789999 8887777764 356878 87743
No 231
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.02 E-value=0.00026 Score=73.45 Aligned_cols=172 Identities=13% Similarity=0.091 Sum_probs=113.5
Q ss_pred CCCEEEEEeCC--CeEEEEeCCCCCCCC---CCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCCCCeEEEEEecCCCCcE
Q 004203 80 ARRGLASWVEA--ESLHHLRPKYCPLSP---PPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (768)
Q Consensus 80 ~g~~LvSgs~D--gsIrlWd~~t~~L~g---H~~~VtslafSPDG~~LaSgS-~DgtVrVWDl~tg~~l~~l~gH~g~V~ 153 (768)
++....+.+.. ..|+.+|++++++.. -...........+++.|+... .++.+.+||.++.+.+..+.... .-+
T Consensus 30 ~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gw 108 (243)
T 3mbr_X 30 RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGW 108 (243)
T ss_dssp TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCC
T ss_pred CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-Cce
Confidence 34445555554 489999999885321 112233333333456666554 48999999999999999987543 334
Q ss_pred EEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC------CCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCccc
Q 004203 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY------RPIASIAFHASGELLAVAS--GHKLYIWRYNMREET 225 (768)
Q Consensus 154 sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~------~~V~svafSPDG~~LatgS--dd~I~IWDl~t~~~~ 225 (768)
.++ + +++.|+.+..++.|.++|..+.+.+..+... ..++.+.|. +|+.. +.. .+.|.+.|..+++..
T Consensus 109 glt--~-dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ly-anvw~s~~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 109 ALT--S-DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELL-ANVWLTSRIARIDPASGKVV 183 (243)
T ss_dssp EEE--E-CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE-EEETTTTEEEEECTTTCBEE
T ss_pred EEe--e-CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEE-EEECCCCeEEEEECCCCCEE
Confidence 555 4 4555555556889999999999888776532 355677776 66543 443 566999999998764
Q ss_pred cCCeEee-----------cCCCCeEEEEEccCCCeEEEEEeeCC
Q 004203 226 SSPRIVL-----------RTRRSLRAVHFHPHAAPLLLTAEVND 258 (768)
Q Consensus 226 ~~~~~l~-----------~h~~~V~sVaFSPDG~~LlaS~svwd 258 (768)
.. ..+. ....-.+.|+|+|+++.|++++..|.
T Consensus 184 ~~-idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp 226 (243)
T 3mbr_X 184 AW-IDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWP 226 (243)
T ss_dssp EE-EECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCS
T ss_pred EE-EECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCC
Confidence 41 1111 11235799999999999999998774
No 232
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.98 E-value=0.00015 Score=83.94 Aligned_cols=171 Identities=8% Similarity=-0.063 Sum_probs=121.1
Q ss_pred CCEEE-EEeCCCeEEEEeCCCCCC-----CCCCCCeEEEEE-C-CCCCEEEEEe------------------CCCeEEEE
Q 004203 81 RRGLA-SWVEAESLHHLRPKYCPL-----SPPPRSTIAAAF-S-PDGKTLASTH------------------GDHTVKII 134 (768)
Q Consensus 81 g~~Lv-Sgs~DgsIrlWd~~t~~L-----~gH~~~Vtslaf-S-PDG~~LaSgS------------------~DgtVrVW 134 (768)
+++++ +-..+..|.+.|+.+.+. .........+++ + |++++++.++ .++.+.++
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvI 180 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 180 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEE
Confidence 44444 444566799999988641 123456889998 5 9999999885 35689999
Q ss_pred eCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCC--------------------------------------eEEE
Q 004203 135 DCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDH--------------------------------------EVRL 176 (768)
Q Consensus 135 Dl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~Dg--------------------------------------tVrL 176 (768)
|.++.+....+.--. ....++++| +++++++.+.+. .|.+
T Consensus 181 D~~t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 181 DADKWEVAWQVLVSG-NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp ETTTTEEEEEEEESS-CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred ECCCCeEEEEEEeCC-CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 999999888876433 456689999 888888877543 4777
Q ss_pred EECCC--CcE-EEEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCccc--------cCCeEeecCCCCeEEEEE
Q 004203 177 WNAST--AEC-IGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYNMREET--------SSPRIVLRTRRSLRAVHF 243 (768)
Q Consensus 177 WDl~s--g~~-i~~l~h~~~V~svafSPDG~~LatgS--dd~I~IWDl~t~~~~--------~~~~~l~~h~~~V~sVaF 243 (768)
.|.++ ++. +..+.......++.++|||++++++. ++.|.++|+.+.+.. ........-....+.++|
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF 338 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAF 338 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEE
T ss_pred EeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEE
Confidence 88877 444 55555555667899999999999988 455999999865310 001112233467899999
Q ss_pred ccCCCeEEEEE
Q 004203 244 HPHAAPLLLTA 254 (768)
Q Consensus 244 SPDG~~LlaS~ 254 (768)
+||| ++.++.
T Consensus 339 ~~dG-~aY~t~ 348 (595)
T 1fwx_A 339 DGRG-NAYTSL 348 (595)
T ss_dssp CTTS-EEEEEE
T ss_pred CCCC-eEEEEE
Confidence 9999 555544
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.97 E-value=0.00072 Score=68.75 Aligned_cols=143 Identities=12% Similarity=0.016 Sum_probs=95.9
Q ss_pred CeEEEEECCCCCEEEEEe-CCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE
Q 004203 109 STIAAAFSPDGKTLASTH-GDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS 187 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS-~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~ 187 (768)
.+.+++|+++++.|+.+. .++.|.++|++++.....+.........++++++++.++++-...+.|.++|+........
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 467999999766666554 5789999999876554444333356789999994455555556677999999875433322
Q ss_pred ecCC-CCeEEEEEcCCCCEEEEEEC----CeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 188 RDFY-RPIASIAFHASGELLAVASG----HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 188 l~h~-~~V~svafSPDG~~LatgSd----d~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
.... .....++++|++..|+.+.. +.|.+++++..... ............++|+|++..|.++.
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~---~~~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR---ILAQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE---EEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE---EEEECCCCCCcEEEEcCCCCEEEEEE
Confidence 3222 45688999998777766653 35888887653321 11112335689999999988776654
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.96 E-value=0.00014 Score=85.48 Aligned_cols=160 Identities=13% Similarity=0.141 Sum_probs=109.1
Q ss_pred eEEEEeCCCCCC------CCCC-------CCeEEEEECCCC---CEEEEEeCCCeEEEEeCCCCeEEEEEecCC------
Q 004203 92 SLHHLRPKYCPL------SPPP-------RSTIAAAFSPDG---KTLASTHGDHTVKIIDCQTGSCLKVLHGHR------ 149 (768)
Q Consensus 92 sIrlWd~~t~~L------~gH~-------~~VtslafSPDG---~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~------ 149 (768)
.|..+|.+++++ ..|. .....+....|| +.++.++.+|.|+++|.++|+.+..++...
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 477788877632 2231 223334444578 689999999999999999999887664221
Q ss_pred ----CC-c------------------------EEEEEccCCCCEEEEEeC------------------------------
Q 004203 150 ----RT-P------------------------WVVRFHPLNPTIIASGSL------------------------------ 170 (768)
Q Consensus 150 ----g~-V------------------------~sVafSP~dg~lLaSgS~------------------------------ 170 (768)
+. + ..++++| +..+++....
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 442 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP-QTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT 442 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET-TTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC-CCCEEEEeChhcceeeeccccccccccccccccccccccc
Confidence 00 0 1468889 6666666432
Q ss_pred -------------CCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEeecCCC
Q 004203 171 -------------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRR 236 (768)
Q Consensus 171 -------------DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l~~h~~ 236 (768)
.+.|..||+.+++.+..+.+..++....+..++.++++++ ++.+++||.++++... .....+..
T Consensus 443 g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw--~~~~~~~~ 520 (677)
T 1kb0_A 443 AKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW--EAPTGTGV 520 (677)
T ss_dssp CEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE--EEECSSCC
T ss_pred ccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceee--eeeCCCCc
Confidence 2789999999999988887766666666777888888887 4569999999998754 12223333
Q ss_pred CeEEEEEccCCCeEEEEE
Q 004203 237 SLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 237 ~V~sVaFSPDG~~LlaS~ 254 (768)
.-.-+.|..+|+.+++..
T Consensus 521 ~~~p~~y~~~G~~~v~~~ 538 (677)
T 1kb0_A 521 VAAPSTYMVDGRQYVSVA 538 (677)
T ss_dssp CSCCEEEEETTEEEEEEE
T ss_pred ccCCEEEEeCCEEEEEEe
Confidence 334567788998666543
No 235
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.91 E-value=0.0009 Score=70.11 Aligned_cols=170 Identities=8% Similarity=0.068 Sum_probs=104.2
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCCC-----------------------CCCCeEEEEECC-CCCEEEEEeCCCeEEEEeC
Q 004203 81 RRGLASWVEAESLHHLRPKYCPLSP-----------------------PPRSTIAAAFSP-DGKTLASTHGDHTVKIIDC 136 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~L~g-----------------------H~~~VtslafSP-DG~~LaSgS~DgtVrVWDl 136 (768)
+..+++...++.|..|+.....+.. ....+.++++.+ +| .|+.+...+.|.++|.
T Consensus 30 g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~d~~~~i~~~d~ 108 (322)
T 2fp8_A 30 NKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIVDCYYHLSVVGS 108 (322)
T ss_dssp CSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEEETTTEEEEECT
T ss_pred CCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEEECCCCEEEEeC
Confidence 3335556666777777765542210 013578999998 55 4555555566899998
Q ss_pred CCCeEEEEEec-----CCCCcEEEEEccCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEecCCCCe
Q 004203 137 QTGSCLKVLHG-----HRRTPWVVRFHPLNPTIIASGSL-----------------DHEVRLWNASTAECIGSRDFYRPI 194 (768)
Q Consensus 137 ~tg~~l~~l~g-----H~g~V~sVafSP~dg~lLaSgS~-----------------DgtVrLWDl~sg~~i~~l~h~~~V 194 (768)
++++. ..+.. .......+++.+.++++.++-.. ++.|..||..+++.......-...
T Consensus 109 ~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p 187 (322)
T 2fp8_A 109 EGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP 187 (322)
T ss_dssp TCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC
T ss_pred CCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC
Confidence 76643 22221 11346778898744566655322 367999998877654433322345
Q ss_pred EEEEEcCCCCEEEEEE--CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 195 ASIAFHASGELLAVAS--GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 195 ~svafSPDG~~LatgS--dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
..++|+|+|++|+++. .++|++||+....... ...+..... ...++++++|+.+++..
T Consensus 188 ~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~-~~~~~~~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 188 GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGT-AEVLVKIPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp CEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTC-EEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred cceEECCCCCEEEEEeCCCCeEEEEECCCCcCCc-cceEEeCCC-CCCeEECCCCCEEEEec
Confidence 6799999999877775 3569999987532111 111112223 78899999998665554
No 236
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.87 E-value=0.00061 Score=80.90 Aligned_cols=144 Identities=13% Similarity=0.077 Sum_probs=92.0
Q ss_pred CCCC-CeEEEEEC-CCCCEEEEEeC-C----CeEEEEeCCCC-eEEE-EEecCCCCcEEEEEccCCCCEEEEEeCC----
Q 004203 105 PPPR-STIAAAFS-PDGKTLASTHG-D----HTVKIIDCQTG-SCLK-VLHGHRRTPWVVRFHPLNPTIIASGSLD---- 171 (768)
Q Consensus 105 gH~~-~VtslafS-PDG~~LaSgS~-D----gtVrVWDl~tg-~~l~-~l~gH~g~V~sVafSP~dg~lLaSgS~D---- 171 (768)
+|.- .+...+|| |||++|+.... + .+|+++|++++ +.+. .+.. ....+.|+| |++.|+....|
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~Wsp-Dg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGP-DHTSLFYVTKDETLR 245 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECS-STTEEEEEEECTTCC
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEec-CCCEEEEEEECCCCC
Confidence 4443 68899999 99999886543 2 36999999998 6321 1221 134578999 88777776665
Q ss_pred -CeEEEEECCCCcE--EEEe--cCCCCeEEEEEcCCCCEEEEEEC---C-eEEEEEcCCCccccCC--eEeec-CCCCeE
Q 004203 172 -HEVRLWNASTAEC--IGSR--DFYRPIASIAFHASGELLAVASG---H-KLYIWRYNMREETSSP--RIVLR-TRRSLR 239 (768)
Q Consensus 172 -gtVrLWDl~sg~~--i~~l--~h~~~V~svafSPDG~~LatgSd---d-~I~IWDl~t~~~~~~~--~~l~~-h~~~V~ 239 (768)
..|+++++.+++. ...+ ........+.|+|||++|+..+. . .|+++|+.++.. .. ..+.. ......
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~--~~~~~~l~~~~~~~~~ 323 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA--HNTLEIVRPREKGVRY 323 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT--CCCEEESSCCCTTCCE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC--CceeEEeecCCCCceE
Confidence 3689999988652 2222 23345678899999998887762 1 299999987531 11 12222 234455
Q ss_pred EEEEccCCCeEEEEEe
Q 004203 240 AVHFHPHAAPLLLTAE 255 (768)
Q Consensus 240 sVaFSPDG~~LlaS~s 255 (768)
++.|+. |+.|++.++
T Consensus 324 s~~~~~-g~~l~~~t~ 338 (751)
T 2xe4_A 324 DVQMHG-TSHLVILTN 338 (751)
T ss_dssp EEEEET-TTEEEEEEC
T ss_pred EEeeee-CCEEEEEeC
Confidence 555543 665665554
No 237
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.84 E-value=0.0005 Score=81.04 Aligned_cols=161 Identities=12% Similarity=0.136 Sum_probs=105.8
Q ss_pred eEEEEeCCCCCC------CCCC-------CCeEEEEECCCCC---EEEEEeCCCeEEEEeCCCCeEEEEEecCC------
Q 004203 92 SLHHLRPKYCPL------SPPP-------RSTIAAAFSPDGK---TLASTHGDHTVKIIDCQTGSCLKVLHGHR------ 149 (768)
Q Consensus 92 sIrlWd~~t~~L------~gH~-------~~VtslafSPDG~---~LaSgS~DgtVrVWDl~tg~~l~~l~gH~------ 149 (768)
.|..||.++++. ..|. ..+.......+|+ .++.++.+|.++++|.++|+.+...+...
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 388888887732 2221 2222233333675 78899999999999999999874332110
Q ss_pred --------------------------------C-CcEEEEEccCCCCEEEEEeC--------------------------
Q 004203 150 --------------------------------R-TPWVVRFHPLNPTIIASGSL-------------------------- 170 (768)
Q Consensus 150 --------------------------------g-~V~sVafSP~dg~lLaSgS~-------------------------- 170 (768)
+ .-..++|+| +..+++....
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 434 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP-DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL 434 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET-TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSS
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC-CCCEEEEeccccceeeeeccccccccccccccccCc
Confidence 0 011268888 6666665422
Q ss_pred -------------------CCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCccccCCeE
Q 004203 171 -------------------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG-HKLYIWRYNMREETSSPRI 230 (768)
Q Consensus 171 -------------------DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSd-d~I~IWDl~t~~~~~~~~~ 230 (768)
++.|+.||+.+|+.+..+.+..+...-.+...+.++++++. +.++.||.++++... ..
T Consensus 435 ~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw--~~ 512 (689)
T 1yiq_A 435 RTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLW--EQ 512 (689)
T ss_dssp EECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE--EE
T ss_pred cccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccce--ee
Confidence 37899999999999888776655555566777888888884 559999999998754 11
Q ss_pred eecCCCCeEEEEEccCCCeEEEEEe
Q 004203 231 VLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 231 l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
...+...-.-+.|..||+.+++...
T Consensus 513 ~~~~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 513 PAASGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp ECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred eCCCCcccCceEEEECCEEEEEEEe
Confidence 2223223345777899987766543
No 238
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.74 E-value=1.5e-05 Score=86.54 Aligned_cols=127 Identities=16% Similarity=0.102 Sum_probs=66.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC--CeE
Q 004203 118 DGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYR--PIA 195 (768)
Q Consensus 118 DG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~--~V~ 195 (768)
++..+++++.|+.|+.||.++|+.+..+.. +.+.+..+.. ++.++++++.|+.|+.||.++|+.+..+.... .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 678999999999999999999999988876 4555555556 67778888899999999999998776654221 110
Q ss_pred -EEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 196 -SIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 196 -svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
...+. ++..|++++ ++.|+.||..+++... ....+. .+.++|++..+++++.
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w---~~~~~~----~~~~~p~~~~v~~~~~ 138 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQ---TLSSAF----ADSLSPSTSLLYLGRT 138 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC-----------------------------EEEEEE
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEE---EecCCC----cccccccCCEEEEEec
Confidence 11111 334566665 5569999999887644 111121 2456677776766543
No 239
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.70 E-value=0.0019 Score=67.70 Aligned_cols=133 Identities=11% Similarity=0.105 Sum_probs=90.3
Q ss_pred eEEEEECCCCCEEEEEeCCC--eEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE
Q 004203 110 TIAAAFSPDGKTLASTHGDH--TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS 187 (768)
Q Consensus 110 VtslafSPDG~~LaSgS~Dg--tVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~ 187 (768)
...+.|+ ++.++.+.+.++ .|+++|+++++.+..+.-.. ........++++++.+..-.++.+.+||.++.+.+.+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 4789999 776666777766 89999999999988886443 3433333442345555555688999999999999999
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEeecCC---CCeEEEEEccCCC
Q 004203 188 RDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTR---RSLRAVHFHPHAA 248 (768)
Q Consensus 188 l~h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l~~h~---~~V~sVaFSPDG~ 248 (768)
+..... ...+++|++.|+.+. +++|+++|..+.+... ...+.... ..++.+.|. +|+
T Consensus 123 i~~~~e--G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~-~I~V~~~g~~~~~lNELe~~-~G~ 183 (262)
T 3nol_A 123 FNYDGE--GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVR-TITVTAHGEELPELNELEWV-DGE 183 (262)
T ss_dssp EECSSC--CCCEEECSSCEEECCSSSEEEEECTTTCSEEE-EEECEETTEECCCEEEEEEE-TTE
T ss_pred EECCCC--ceEEecCCCEEEEECCCCeEEEEcCCCCeEEE-EEEeccCCccccccceeEEE-CCE
Confidence 876542 234456788777665 4459999998877644 11222112 445667886 675
No 240
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.64 E-value=0.013 Score=60.94 Aligned_cols=162 Identities=12% Similarity=0.105 Sum_probs=93.4
Q ss_pred EEeCCCeEEEEeCCCCC--CCCCCCCeEEEEECCCCCEEEEEeCC--CeEEEEeCCCCeEEEEEec-CCCCcEEEEEccC
Q 004203 86 SWVEAESLHHLRPKYCP--LSPPPRSTIAAAFSPDGKTLASTHGD--HTVKIIDCQTGSCLKVLHG-HRRTPWVVRFHPL 160 (768)
Q Consensus 86 Sgs~DgsIrlWd~~t~~--L~gH~~~VtslafSPDG~~LaSgS~D--gtVrVWDl~tg~~l~~l~g-H~g~V~sVafSP~ 160 (768)
+-...+.|..||..... +........+++++++|+++++.... ..|..+|..+++....... .......++..+
T Consensus 48 ~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~- 126 (306)
T 2p4o_A 48 TNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLS- 126 (306)
T ss_dssp EETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESS-
T ss_pred EeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccC-
Confidence 33355666666654331 11123468899999999966555432 3577788888875443332 122334555555
Q ss_pred CCCEEEEEeCCCeEEEEECCCCcE-EE-Ee---------cCCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccC
Q 004203 161 NPTIIASGSLDHEVRLWNASTAEC-IG-SR---------DFYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSS 227 (768)
Q Consensus 161 dg~lLaSgS~DgtVrLWDl~sg~~-i~-~l---------~h~~~V~svafSPDG~~LatgSd--d~I~IWDl~t~~~~~~ 227 (768)
++..+++-..++.|+.+|..+++. +. .. ..-...+.+ +||++.|+++.. +.|++||+........
T Consensus 127 ~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~ 204 (306)
T 2p4o_A 127 DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGE 204 (306)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCC
T ss_pred CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCc
Confidence 555555555688999999876532 11 10 011233455 889998888773 4599999975211111
Q ss_pred CeEeecCCCCeEEEEEccCCCeEE
Q 004203 228 PRIVLRTRRSLRAVHFHPHAAPLL 251 (768)
Q Consensus 228 ~~~l~~h~~~V~sVaFSPDG~~Ll 251 (768)
...+ ........++++++|+.++
T Consensus 205 ~~~~-~~~~~P~gi~vd~dG~l~v 227 (306)
T 2p4o_A 205 PEIF-VEQTNIDDFAFDVEGNLYG 227 (306)
T ss_dssp CEEE-EESCCCSSEEEBTTCCEEE
T ss_pred cEEE-eccCCCCCeEECCCCCEEE
Confidence 1111 1124567789999997544
No 241
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.63 E-value=0.0017 Score=68.07 Aligned_cols=132 Identities=8% Similarity=0.005 Sum_probs=90.5
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Q 004203 110 TIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD 189 (768)
Q Consensus 110 VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~ 189 (768)
...+.|+ ++.++.+.+.++.|+++|+++++.+..+ - ..........++++++....-.++.+.+||.++.+.+.++.
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 5788998 4666677778899999999999988776 2 23343322333345666666678899999999999999987
Q ss_pred CCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEeecCC---CCeEEEEEccCCC
Q 004203 190 FYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTR---RSLRAVHFHPHAA 248 (768)
Q Consensus 190 h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l~~h~---~~V~sVaFSPDG~ 248 (768)
....-..+ ++|++.|+.+. +++|+++|..+.+... ...+.... ..++.+.|. +|+
T Consensus 134 ~~~eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~-~I~V~~~g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 134 YSGEGWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVG-AVQVKLRGQPVELINELECA-NGV 192 (268)
T ss_dssp CSSCCCCE--EEETTEEEEECSSSEEEEECTTTCCEEE-EEECEETTEECCCEEEEEEE-TTE
T ss_pred CCCceeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEE-EEEeCCCCcccccccccEEe-CCE
Confidence 65433334 46788887776 4559999998877644 11222222 345777887 775
No 242
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.62 E-value=0.00083 Score=79.00 Aligned_cols=78 Identities=10% Similarity=0.132 Sum_probs=59.7
Q ss_pred EEEEECCCCCEEEEEeCCC-------------------eEEEEeCCCCeEEEEEecCC---------CCcEEEEEccCCC
Q 004203 111 IAAAFSPDGKTLASTHGDH-------------------TVKIIDCQTGSCLKVLHGHR---------RTPWVVRFHPLNP 162 (768)
Q Consensus 111 tslafSPDG~~LaSgS~Dg-------------------tVrVWDl~tg~~l~~l~gH~---------g~V~sVafSP~dg 162 (768)
..++++|++.+|+.+..++ .|..+|.++|+.+..++... .....+.... ++
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~-dG 324 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI-AG 324 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE-TT
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc-CC
Confidence 3578999999999888764 59999999999988876421 1222334444 56
Q ss_pred ---CEEEEEeCCCeEEEEECCCCcEEEEec
Q 004203 163 ---TIIASGSLDHEVRLWNASTAECIGSRD 189 (768)
Q Consensus 163 ---~lLaSgS~DgtVrLWDl~sg~~i~~l~ 189 (768)
..++.++.+|.|+++|.++|+.+..+.
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence 688999999999999999999876653
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.54 E-value=0.019 Score=58.15 Aligned_cols=165 Identities=12% Similarity=-0.025 Sum_probs=100.3
Q ss_pred EEEEEeCCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEeCCCCeEEEEEecCCCCcEEEEE
Q 004203 83 GLASWVEAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRF 157 (768)
Q Consensus 83 ~LvSgs~DgsIrlWd~~t~~L----~gH~~~VtslafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~g~V~sVaf 157 (768)
..++-...+.|..++...... ........++++++++..|+.+ ...+.|.++|++.......+.........+++
T Consensus 50 ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~v 129 (267)
T 1npe_A 50 VYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVT 129 (267)
T ss_dssp EEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE
T ss_pred EEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEE
Confidence 333444567788888765421 1223568899999976666655 45789999998754433333322246788999
Q ss_pred ccCCCCEEEEEeC--CCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCeEee
Q 004203 158 HPLNPTIIASGSL--DHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSSPRIVL 232 (768)
Q Consensus 158 SP~dg~lLaSgS~--DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~~LatgSd--d~I~IWDl~t~~~~~~~~~l~ 232 (768)
+|+++.++++... .+.|..+++......... ..-.....++|++++..|+++.. +.|.++|++..... .+.
T Consensus 130 d~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~----~~~ 205 (267)
T 1npe_A 130 DPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRR----KVL 205 (267)
T ss_dssp ETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEE----EEE
T ss_pred eeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceE----EEe
Confidence 9934444444333 468888888643322222 22345788999999988887774 45999998754321 122
Q ss_pred cCCCCeEEEEEccCCCeEEEE
Q 004203 233 RTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 233 ~h~~~V~sVaFSPDG~~LlaS 253 (768)
........+++. +..+..+
T Consensus 206 ~~~~~P~gi~~d--~~~lyva 224 (267)
T 1npe_A 206 EGLQYPFAVTSY--GKNLYYT 224 (267)
T ss_dssp ECCCSEEEEEEE--TTEEEEE
T ss_pred cCCCCceEEEEe--CCEEEEE
Confidence 223445666653 4445544
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.52 E-value=0.0011 Score=68.37 Aligned_cols=159 Identities=12% Similarity=0.023 Sum_probs=105.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEE
Q 004203 81 RRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVR 156 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~----L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVa 156 (768)
+..|+.+..++.|..+|.. ++ +..+...+.++...++|. |+.++.++.|..||.+ ++.+..+......+.++.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 5667778888889889887 42 223344566677777776 5667888999999998 887777766566677777
Q ss_pred EccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEeecCC
Q 004203 157 FHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLRTR 235 (768)
Q Consensus 157 fSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSdd~I~IWDl~t~~~~~~~~~l~~h~ 235 (768)
+.+ ++.+++.. +.|..+| .+++...... ....+.++..+++|.+.+...+++|..+|.. ++... ......
T Consensus 184 ~d~-~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~-g~~~~---~~~~~~ 254 (330)
T 3hxj_A 184 IGK-DGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPD-GTEKW---RFKTGK 254 (330)
T ss_dssp ECT-TCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTT-SCEEE---EEECSS
T ss_pred EcC-CCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCC-CCEeE---EeeCCC
Confidence 766 66655443 7799999 7777666554 3356778888988876655556778888743 33211 222223
Q ss_pred CCeEEEEEccCCCeEE
Q 004203 236 RSLRAVHFHPHAAPLL 251 (768)
Q Consensus 236 ~~V~sVaFSPDG~~Ll 251 (768)
..+..+.+.++|..++
T Consensus 255 ~~~~~~~~~~~g~l~v 270 (330)
T 3hxj_A 255 RIESSPVIGNTDTIYF 270 (330)
T ss_dssp CCCSCCEECTTSCEEE
T ss_pred CccccceEcCCCeEEE
Confidence 3344556666776443
No 245
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.49 E-value=0.0016 Score=68.37 Aligned_cols=134 Identities=13% Similarity=0.053 Sum_probs=89.1
Q ss_pred eEEEEECCCCCEEEEEeC--CCeEEEEeCCCCeEEEEEecCCC-CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEE
Q 004203 110 TIAAAFSPDGKTLASTHG--DHTVKIIDCQTGSCLKVLHGHRR-TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIG 186 (768)
Q Consensus 110 VtslafSPDG~~LaSgS~--DgtVrVWDl~tg~~l~~l~gH~g-~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~ 186 (768)
...++|++|+.++++.+. +..|.++|+.+++.+..+.-... ....+++. ++.+.++.-.++.+.++|..+.+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 589999998744444443 68999999999999888753222 12234443 34555556668899999999999988
Q ss_pred EecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEeecC---CCCeEEEEEccCCC
Q 004203 187 SRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRT---RRSLRAVHFHPHAA 248 (768)
Q Consensus 187 ~l~h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l~~h---~~~V~sVaFSPDG~ 248 (768)
.+... .-....+++||+.|+++. ++.|.++|..+.+... ...+... -..++.+.|. +|+
T Consensus 101 ~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~-~I~Vg~~~~p~~~~nele~~-dg~ 163 (266)
T 2iwa_A 101 NFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIK-KHNVKYNGHRVIRLNELEYI-NGE 163 (266)
T ss_dssp EEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEE-EEECEETTEECCCEEEEEEE-TTE
T ss_pred EEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEE-EEEECCCCcccccceeEEEE-CCE
Confidence 87654 112344667888777665 3459999998876543 1111111 1247788888 674
No 246
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.47 E-value=0.097 Score=57.26 Aligned_cols=165 Identities=10% Similarity=-0.001 Sum_probs=110.0
Q ss_pred EEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEeCCCC----eEEEEEecCCCCcEEEEE
Q 004203 86 SWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTG----SCLKVLHGHRRTPWVVRF 157 (768)
Q Consensus 86 Sgs~DgsIrlWd~~t~~---L~gH~~~VtslafSPDG~~LaSg-S~DgtVrVWDl~tg----~~l~~l~gH~g~V~sVaf 157 (768)
..+....|+..++.... +......+.+++|++.+..|+.. ...+.|+.++++.. .....+.........+++
T Consensus 87 l~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 166 (400)
T 3p5b_L 87 FFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 166 (400)
T ss_dssp EEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEE
T ss_pred EEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEE
Confidence 34445678888876552 23445678999999966666655 45789999998752 233444434456788999
Q ss_pred ccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEeec
Q 004203 158 HPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLR 233 (768)
Q Consensus 158 SP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSd---d~I~IWDl~t~~~~~~~~~l~~ 233 (768)
.+.+++++++-...+.|.+.|+........+. .-.....++++|.+.+|+.... ++|...+++...... ....
T Consensus 167 D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~---~~~~ 243 (400)
T 3p5b_L 167 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTE 243 (400)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE---EECS
T ss_pred EecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE---EEEC
Confidence 87556666666677899999998665444433 3345789999998877776662 348888886543211 2223
Q ss_pred CCCCeEEEEEccCCCeEEEE
Q 004203 234 TRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 234 h~~~V~sVaFSPDG~~LlaS 253 (768)
.-...+.|++++++..|..+
T Consensus 244 ~l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 244 NIQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEE
T ss_pred CCCceEEEEEEeCCCEEEEE
Confidence 34678999999988877665
No 247
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.46 E-value=0.021 Score=60.17 Aligned_cols=162 Identities=10% Similarity=-0.005 Sum_probs=102.9
Q ss_pred CCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEeCCC----CeEEEEEecCCCCcEEEEEccCC
Q 004203 90 AESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQT----GSCLKVLHGHRRTPWVVRFHPLN 161 (768)
Q Consensus 90 DgsIrlWd~~t~~---L~gH~~~VtslafSPDG~~LaSg-S~DgtVrVWDl~t----g~~l~~l~gH~g~V~sVafSP~d 161 (768)
...|+..++.... +...-....+++|+++++.|+.+ ...+.|+.+|+++ ......+......+..+++.+.+
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 3456777766542 22334567899999976655554 4578999999876 22233343333456789998745
Q ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEeecCCCC
Q 004203 162 PTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRS 237 (768)
Q Consensus 162 g~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSd---d~I~IWDl~t~~~~~~~~~l~~h~~~ 237 (768)
++++++-..++.|.+.|+.......... .-.....++++|++..|+.+.. ++|..++++...... .....-..
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~---~~~~~~~~ 165 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTENIQW 165 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE---EECSSCSC
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE---EEECCCCC
Confidence 6666666677899999987654433332 3356789999998777766653 458888876543211 12223457
Q ss_pred eEEEEEccCCCeEEEEE
Q 004203 238 LRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 238 V~sVaFSPDG~~LlaS~ 254 (768)
.+.++|+|++..|..+-
T Consensus 166 P~gla~d~~~~~lY~~D 182 (316)
T 1ijq_A 166 PNGITLDLLSGRLYWVD 182 (316)
T ss_dssp EEEEEEETTTTEEEEEE
T ss_pred ceEEEEeccCCEEEEEE
Confidence 88999999888776653
No 248
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.45 E-value=0.0091 Score=65.07 Aligned_cols=165 Identities=9% Similarity=-0.027 Sum_probs=109.5
Q ss_pred EeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCC
Q 004203 87 WVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNP 162 (768)
Q Consensus 87 gs~DgsIrlWd~~t~~---L~gH~~~VtslafSPDG~~La-SgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg 162 (768)
.+....|+.+++.... +......+.+++|++.+..|+ +-...+.|+.++++.+.....+.........+++.+.++
T Consensus 92 ~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g 171 (386)
T 3v65_B 92 FANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD 171 (386)
T ss_dssp EECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTT
T ss_pred eecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCC
Confidence 3445678888876553 223345688999998655555 445678999999987765555543334566789988556
Q ss_pred CEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEeecCCCCe
Q 004203 163 TIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRSL 238 (768)
Q Consensus 163 ~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSd---d~I~IWDl~t~~~~~~~~~l~~h~~~V 238 (768)
.++++-...+.|.+.++........+. .-.....++++|++..|+.... ++|+.++++...... .....-...
T Consensus 172 ~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~~~~~~~~P 248 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI---IADTHLFWP 248 (386)
T ss_dssp EEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---EECSSCSCE
T ss_pred eEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE---EEECCCCCe
Confidence 666666667889999987554333332 2356789999998887777663 348888876543211 222334568
Q ss_pred EEEEEccCCCeEEEEE
Q 004203 239 RAVHFHPHAAPLLLTA 254 (768)
Q Consensus 239 ~sVaFSPDG~~LlaS~ 254 (768)
+.|+|+|++..|..+-
T Consensus 249 nGlavd~~~~~lY~aD 264 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVD 264 (386)
T ss_dssp EEEEEEGGGTEEEEEE
T ss_pred eeEEEeCCCCEEEEEE
Confidence 9999999887776653
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.45 E-value=0.00034 Score=81.03 Aligned_cols=163 Identities=10% Similarity=0.088 Sum_probs=105.6
Q ss_pred CCeEEEEeCCCCCCCCC---CCCeEEEEECCCCCEEEEEeCCC-------------------------------------
Q 004203 90 AESLHHLRPKYCPLSPP---PRSTIAAAFSPDGKTLASTHGDH------------------------------------- 129 (768)
Q Consensus 90 DgsIrlWd~~t~~L~gH---~~~VtslafSPDG~~LaSgS~Dg------------------------------------- 129 (768)
++.+.++|.++.+.... .+.-..++++|||+++++++.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred CceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 44688888887531100 11345678999999999888543
Q ss_pred -eEEEEeCCC--CeE-EEEEecCCCCcEEEEEccCCCCEEEEE-eCCCeEEEEECCCCc------------EEEEecCCC
Q 004203 130 -TVKIIDCQT--GSC-LKVLHGHRRTPWVVRFHPLNPTIIASG-SLDHEVRLWNASTAE------------CIGSRDFYR 192 (768)
Q Consensus 130 -tVrVWDl~t--g~~-l~~l~gH~g~V~sVafSP~dg~lLaSg-S~DgtVrLWDl~sg~------------~i~~l~h~~ 192 (768)
.|.|.|..+ ++. +..+... ....++.++| ||++++.+ ..+.+|.++|+.+.+ .........
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~ 331 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL 331 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS
T ss_pred CcEEEEeCcccCCceeEEEEecC-CCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC
Confidence 477888777 544 4555432 3466789999 77765554 467899999999653 344455556
Q ss_pred CeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCc------c-ccCCeEeecCCCC-----eEEEEEccCCCeEEEEEe
Q 004203 193 PIASIAFHASGELLAVAS--GHKLYIWRYNMRE------E-TSSPRIVLRTRRS-----LRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 193 ~V~svafSPDG~~LatgS--dd~I~IWDl~t~~------~-~~~~~~l~~h~~~-----V~sVaFSPDG~~LlaS~s 255 (768)
...-++|+||| ++++.. ++.|.+||+.+.. . ......+..|..+ -..+.++|||++|++...
T Consensus 332 gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 332 GPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp CEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 77889999999 777776 5669999998721 1 1111122223221 122356899998887765
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.41 E-value=0.0092 Score=61.76 Aligned_cols=134 Identities=12% Similarity=0.055 Sum_probs=88.7
Q ss_pred CeEEEEECCCCCEEEEEeCC--CeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEE
Q 004203 109 STIAAAFSPDGKTLASTHGD--HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIG 186 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS~D--gtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~ 186 (768)
-...+.|+. +.++.+.+.+ ..|+++|+++++.+..+.-... .......+.++++....-.++.+.+||.++.+.+.
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRA 99 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEE
Confidence 367999985 5555555554 4899999999999888764433 33333333245555566678899999999999999
Q ss_pred EecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEeecCC---CCeEEEEEccCCC
Q 004203 187 SRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTR---RSLRAVHFHPHAA 248 (768)
Q Consensus 187 ~l~h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l~~h~---~~V~sVaFSPDG~ 248 (768)
++.....-..+ ++|++.|+.+. +++|.++|..+.+... ...+..+. ..++.+.|. +|+
T Consensus 100 ti~~~~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~-~I~V~~~g~~~~~lNeLe~~-~G~ 161 (243)
T 3mbr_X 100 RFRYPGEGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVG-SIKVTAGGRPLDNLNELEWV-NGE 161 (243)
T ss_dssp EEECSSCCCEE--EECSSCEEEECSSSEEEEECTTTCCEEE-EEECEETTEECCCEEEEEEE-TTE
T ss_pred EEeCCCCceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEE-EEEEccCCcccccceeeEEe-CCE
Confidence 98765533344 46677666655 4459999998876544 11222221 355667766 665
No 251
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.38 E-value=0.017 Score=61.98 Aligned_cols=163 Identities=9% Similarity=-0.043 Sum_probs=106.8
Q ss_pred CCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCE
Q 004203 89 EAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTI 164 (768)
Q Consensus 89 ~DgsIrlWd~~t~~---L~gH~~~VtslafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~l 164 (768)
....|+..++.... +......+.+++|++.+..|+.. ...+.|+.++++.+.....+.........+++.+.++.+
T Consensus 51 ~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 130 (349)
T 3v64_C 51 NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 130 (349)
T ss_dssp CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE
T ss_pred cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeE
Confidence 34456666665432 22233457899999866665544 467899999998776555444334456788998856666
Q ss_pred EEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEeecCCCCeEE
Q 004203 165 IASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRSLRA 240 (768)
Q Consensus 165 LaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSd---d~I~IWDl~t~~~~~~~~~l~~h~~~V~s 240 (768)
+++-...+.|.+.++........+. .-.....++++|++..|+.... ++|..++++...... .....-...+.
T Consensus 131 y~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~~~~~~~~PnG 207 (349)
T 3v64_C 131 YWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI---IADTHLFWPNG 207 (349)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---SCCSSCSCEEE
T ss_pred EEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE---EEECCCCCcce
Confidence 6666667899999987654333332 2346789999998877776663 448888876543211 11223456799
Q ss_pred EEEccCCCeEEEEE
Q 004203 241 VHFHPHAAPLLLTA 254 (768)
Q Consensus 241 VaFSPDG~~LlaS~ 254 (768)
|+|+|++..|..+-
T Consensus 208 la~d~~~~~lY~aD 221 (349)
T 3v64_C 208 LTIDYAGRRMYWVD 221 (349)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEeCCCCEEEEEE
Confidence 99999887776653
No 252
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.30 E-value=0.0025 Score=65.64 Aligned_cols=161 Identities=14% Similarity=-0.008 Sum_probs=104.2
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEE
Q 004203 79 DARRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (768)
Q Consensus 79 d~g~~LvSgs~DgsIrlWd~~t~~----L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~s 154 (768)
+.+..++.+..++.|..+|.. ++ +......+.++.+.++|.+++ ++ +.|..|| .+++....+......+.+
T Consensus 145 ~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~ 219 (330)
T 3hxj_A 145 SEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTR 219 (330)
T ss_dssp CTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSC
T ss_pred cCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceec
Confidence 335567778888889999987 42 223345567777877877554 44 8899999 788877777666666888
Q ss_pred EEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEeec
Q 004203 155 VRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY-RPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLR 233 (768)
Q Consensus 155 VafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~-~~V~svafSPDG~~LatgSdd~I~IWDl~t~~~~~~~~~l~~ 233 (768)
+...+ ++. +..++.++.|..+|. +++.+..+... ..+..+.+.+++.+.+...+++|..+|. +++... ....
T Consensus 220 ~~~~~-~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~---~~~~ 292 (330)
T 3hxj_A 220 PAISE-DGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKW---NFET 292 (330)
T ss_dssp CEECT-TSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEE---EEEC
T ss_pred eEECC-CCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEE---EEEc
Confidence 88877 555 455667788888884 55555554432 3344566666776544433557999985 443322 2222
Q ss_pred CCCCeEEEEEccCCCeEE
Q 004203 234 TRRSLRAVHFHPHAAPLL 251 (768)
Q Consensus 234 h~~~V~sVaFSPDG~~Ll 251 (768)
....+.++...++|+.++
T Consensus 293 ~~~~~~~~~~d~~g~l~~ 310 (330)
T 3hxj_A 293 GSWIIATPVIDENGTIYF 310 (330)
T ss_dssp SSCCCSCCEECTTCCEEE
T ss_pred CCccccceEEcCCCEEEE
Confidence 345567777878887444
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.28 E-value=0.0054 Score=64.11 Aligned_cols=139 Identities=8% Similarity=0.074 Sum_probs=90.8
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecC--------------------CCCcEEEEEccCCCCEEEEE
Q 004203 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH--------------------RRTPWVVRFHPLNPTIIASG 168 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH--------------------~g~V~sVafSP~dg~lLaSg 168 (768)
...+++|+++|++++++..++.|..||.++++.. .+... ...+..+++.+++++ |+.+
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 3467889999998888989999999998876543 23210 134778999873444 4555
Q ss_pred eCCCeEEEEECCCCcEEEEec-----CCCCeEEEEEcC-CCCEEEEEEC------------------CeEEEEEcCCCcc
Q 004203 169 SLDHEVRLWNASTAECIGSRD-----FYRPIASIAFHA-SGELLAVASG------------------HKLYIWRYNMREE 224 (768)
Q Consensus 169 S~DgtVrLWDl~sg~~i~~l~-----h~~~V~svafSP-DG~~LatgSd------------------d~I~IWDl~t~~~ 224 (768)
...+.|..+|..+++...... .......+++++ +|.+.++-.. +.|..||..+++.
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 555568899987654322211 113568899999 9986665432 3488888766643
Q ss_pred ccCCeEeecCCCCeEEEEEccCCCeEEEE
Q 004203 225 TSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 225 ~~~~~~l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
.. +.........|+|+|+|+.+.++
T Consensus 178 ~~----~~~~~~~p~gia~~~dg~~lyv~ 202 (322)
T 2fp8_A 178 TL----LLKELHVPGGAEVSADSSFVLVA 202 (322)
T ss_dssp EE----EEEEESCCCEEEECTTSSEEEEE
T ss_pred EE----eccCCccCcceEECCCCCEEEEE
Confidence 21 22222445789999999866555
No 254
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.27 E-value=0.028 Score=66.53 Aligned_cols=177 Identities=8% Similarity=-0.002 Sum_probs=121.4
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCCCCC------------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe
Q 004203 73 IFEAGRDARRGLASWVEAESLHHLRPKYCPLS------------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS 140 (768)
Q Consensus 73 l~~a~~d~g~~LvSgs~DgsIrlWd~~t~~L~------------gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~ 140 (768)
+.....+....|+.+..++-|..|+..+.++. -....|.++...++|+.|..|+.++-|.+||.++++
T Consensus 359 V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred eEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 44445566778889998888999998765321 123579999999888867778887789999998877
Q ss_pred EEEEEe----cCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-------CCCCeEEEEEcCCCCEEEEE
Q 004203 141 CLKVLH----GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-------FYRPIASIAFHASGELLAVA 209 (768)
Q Consensus 141 ~l~~l~----gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-------h~~~V~svafSPDG~~Latg 209 (768)
...... .....|.++...+ ++.+.+.. .+ -|.+||..+++...... ....|.++..+++|.+.+..
T Consensus 439 ~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 439 VENFNQRNSQLVNENVYAILPDG-EGNLWLGT-LS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp EEEECTTTSCCSCSCEEEEEECS-SSCEEEEE-SS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred EEEeecCCCCcCCCeeEEEEECC-CCCEEEEe-cC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 543321 1245688888877 67655544 44 58999998876544321 13578999999999866655
Q ss_pred ECCeEEEEEcCCCccccCC---eEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 210 SGHKLYIWRYNMREETSSP---RIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 210 Sdd~I~IWDl~t~~~~~~~---~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
. ++|.+||..+... ... ....-....|.++...++|...+.+.
T Consensus 516 ~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~ 561 (795)
T 4a2l_A 516 E-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR 561 (795)
T ss_dssp S-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES
T ss_pred C-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC
Confidence 4 7799999877643 100 00011245799999999999666553
No 255
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.15 E-value=0.0031 Score=74.26 Aligned_cols=81 Identities=14% Similarity=0.045 Sum_probs=60.8
Q ss_pred CCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC--CeEEEEEcCCCC-
Q 004203 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYR--PIASIAFHASGE- 204 (768)
Q Consensus 128 DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~--~V~svafSPDG~- 204 (768)
++.|+.||+.||+.+..++.+.. +....+.. .+.+++.++.|+.|+.||.++|+.+..+.... ...-+.|..+|+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~q 531 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTI-FNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQ 531 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSS-CCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ceeEEEEECCCCCeEeEccCCCC-ccCccceE-CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEE
Confidence 37899999999999988875543 33335566 67889999999999999999999998875433 234477788887
Q ss_pred EEEEEE
Q 004203 205 LLAVAS 210 (768)
Q Consensus 205 ~LatgS 210 (768)
++++.+
T Consensus 532 yv~~~~ 537 (689)
T 1yiq_A 532 YVTFMA 537 (689)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 444444
No 256
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.15 E-value=0.00084 Score=73.48 Aligned_cols=89 Identities=13% Similarity=-0.081 Sum_probs=71.9
Q ss_pred eEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEe----------CCCeEEEEECCCCcEEEEecCC--------
Q 004203 130 TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS----------LDHEVRLWNASTAECIGSRDFY-------- 191 (768)
Q Consensus 130 tVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS----------~DgtVrLWDl~sg~~i~~l~h~-------- 191 (768)
+|.++|..+++.+..+.....+ .+.++| |+++++.+. .+++|.+||+.+++.+.++...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 8999999999999998755555 799999 777777665 4789999999999999887533
Q ss_pred CCeEEEEEcCCCCEEEEEEC---CeEEE--EEcCC
Q 004203 192 RPIASIAFHASGELLAVASG---HKLYI--WRYNM 221 (768)
Q Consensus 192 ~~V~svafSPDG~~LatgSd---d~I~I--WDl~t 221 (768)
.....++|+|||++|+++.. +.+.+ +|..+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 23567999999999998873 34888 88866
No 257
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.15 E-value=0.0072 Score=70.85 Aligned_cols=160 Identities=12% Similarity=0.153 Sum_probs=99.5
Q ss_pred eEEEEeCCCCCC------CCCC-------CCeEEEEECCCCC---EEEEEeCCCeEEEEeCCCCeEEEEEecCC------
Q 004203 92 SLHHLRPKYCPL------SPPP-------RSTIAAAFSPDGK---TLASTHGDHTVKIIDCQTGSCLKVLHGHR------ 149 (768)
Q Consensus 92 sIrlWd~~t~~L------~gH~-------~~VtslafSPDG~---~LaSgS~DgtVrVWDl~tg~~l~~l~gH~------ 149 (768)
.|..+|.+++++ ..|. .......+..||+ .++.++.+|.++++|.++|+.+..++...
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 350 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK 350 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence 377788777632 2232 2333333344675 68899999999999999999874443211
Q ss_pred -----CC-------------------------cEEEEEccCCCCEEEEE-------------------------------
Q 004203 150 -----RT-------------------------PWVVRFHPLNPTIIASG------------------------------- 168 (768)
Q Consensus 150 -----g~-------------------------V~sVafSP~dg~lLaSg------------------------------- 168 (768)
+. -..++++| +..+++..
T Consensus 351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 429 (668)
T 1kv9_A 351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNP-GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADAT 429 (668)
T ss_dssp ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEET-TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCC
T ss_pred cccccCCccccccccccCCeeEECCCCccccCCCcceECC-CCCEEEEeccccceEeeeeccccccccccccCccccccC
Confidence 00 01257788 44444331
Q ss_pred -----eCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCccccCCeEeecCC-CCeEEE
Q 004203 169 -----SLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG-HKLYIWRYNMREETSSPRIVLRTR-RSLRAV 241 (768)
Q Consensus 169 -----S~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSd-d~I~IWDl~t~~~~~~~~~l~~h~-~~V~sV 241 (768)
..++.|+.||+.+++.+.............+...+.++++++. +.++.||.++++... ...... -.-.-+
T Consensus 430 ~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~---~~~~~~~~~~~p~ 506 (668)
T 1kv9_A 430 DVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALW---QFEAQSGIVAAPM 506 (668)
T ss_dssp CCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE---EEECSSCCCSCCE
T ss_pred CCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhhe---EecCCCCcccCce
Confidence 1247899999999999887765555544455667888888874 559999999987644 121111 111234
Q ss_pred EEccCCCeEEEEEe
Q 004203 242 HFHPHAAPLLLTAE 255 (768)
Q Consensus 242 aFSPDG~~LlaS~s 255 (768)
.+..+|+..++.+.
T Consensus 507 ~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 507 TFELAGRQYVAIMA 520 (668)
T ss_dssp EEEETTEEEEEEEE
T ss_pred EEEECCEEEEEEEe
Confidence 55668886665554
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.10 E-value=0.068 Score=63.21 Aligned_cols=179 Identities=9% Similarity=0.006 Sum_probs=122.2
Q ss_pred eEEEEEecCCCEEEEEeCCCeEEEEeCCCCCCC----------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeE
Q 004203 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCPLS----------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC 141 (768)
Q Consensus 72 ~l~~a~~d~g~~LvSgs~DgsIrlWd~~t~~L~----------gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~ 141 (768)
.+.....|....|+.+..++-|..++.....+. -....|.++...++|++. .|+.++-|.+||..+++.
T Consensus 311 ~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~ 389 (795)
T 4a2l_A 311 SVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRF 389 (795)
T ss_dssp CEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCE
T ss_pred cEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcE
Confidence 344445667788888998888888987654321 123469999999888654 577777799999887765
Q ss_pred EEEEec--------CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-----CCCCeEEEEEcCCCCEEEE
Q 004203 142 LKVLHG--------HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-----FYRPIASIAFHASGELLAV 208 (768)
Q Consensus 142 l~~l~g--------H~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-----h~~~V~svafSPDG~~Lat 208 (768)
...... ....|.++...+ ++++|..|+.++-|.+||..+++...... ....|.++...++|.+.+.
T Consensus 390 ~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig 468 (795)
T 4a2l_A 390 TSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLG 468 (795)
T ss_dssp EEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEE
T ss_pred EEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEE
Confidence 433211 135688888877 77746667777789999999877554322 2457899999998886655
Q ss_pred EECCeEEEEEcCCCccccCCeE---eecCCCCeEEEEEccCCCeEEEE
Q 004203 209 ASGHKLYIWRYNMREETSSPRI---VLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 209 gSdd~I~IWDl~t~~~~~~~~~---l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
. .+++.+||..+++....... ..-....|.++...++|+..+.+
T Consensus 469 t-~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 469 T-LSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp E-SSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred e-cCceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 4 47799999877654221000 00123679999999999866554
No 259
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.08 E-value=0.19 Score=60.32 Aligned_cols=165 Identities=10% Similarity=0.008 Sum_probs=108.2
Q ss_pred EEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEeCCCC----eEEEEEecCCCCcEEEEE
Q 004203 86 SWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTG----SCLKVLHGHRRTPWVVRF 157 (768)
Q Consensus 86 Sgs~DgsIrlWd~~t~~---L~gH~~~VtslafSPDG~~La-SgS~DgtVrVWDl~tg----~~l~~l~gH~g~V~sVaf 157 (768)
-......|+..++.... +......+.+++|++....|+ +-...+.|+.+++... .....+.........|++
T Consensus 399 l~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv 478 (791)
T 3m0c_C 399 FFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 478 (791)
T ss_dssp EEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred ccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeee
Confidence 34455667777776442 334456788999999555555 5455788999998753 334444434556778999
Q ss_pred ccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEeec
Q 004203 158 HPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLR 233 (768)
Q Consensus 158 SP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSd---d~I~IWDl~t~~~~~~~~~l~~ 233 (768)
.+.+++++++-...+.|.+.++........+. .-.....|+++|.+.+|+.+.. ++|.+.+++...... .+..
T Consensus 479 D~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~---lv~~ 555 (791)
T 3m0c_C 479 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTE 555 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE---EECS
T ss_pred eecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE---EEeC
Confidence 98455666666677899999998654433332 3346789999998877777663 348888886554311 2223
Q ss_pred CCCCeEEEEEccCCCeEEEE
Q 004203 234 TRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 234 h~~~V~sVaFSPDG~~LlaS 253 (768)
.-...+.|++++.+..|..+
T Consensus 556 ~l~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp SCSCEEEEEEETTTTEEEEE
T ss_pred CCCCceEEEEecCCCeEEEE
Confidence 34678999999888767665
No 260
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.01 E-value=0.078 Score=56.17 Aligned_cols=187 Identities=9% Similarity=-0.012 Sum_probs=113.2
Q ss_pred EEEECCCCCEEEEEeCC--------------CeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEe----CCCe
Q 004203 112 AAAFSPDGKTLASTHGD--------------HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS----LDHE 173 (768)
Q Consensus 112 slafSPDG~~LaSgS~D--------------gtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS----~Dgt 173 (768)
+--++++|++|+.+... +.|+..+++.++....... . ...|++ +++.|+... .+..
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~---~--~~~~s~-~g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD---P--CIYASL-IGNYIYYLHYDTQTATS 130 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS---C--EEEEEE-ETTEEEEEEESSSSCEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC---C--ccEEEE-eCCEEEEEeecCCCCce
Confidence 34567899999887653 5788899887764443322 1 236788 777777765 3446
Q ss_pred EEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEECCe--EEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEE
Q 004203 174 VRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHK--LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLL 251 (768)
Q Consensus 174 VrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSdd~--I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~Ll 251 (768)
|+..++......+...+.. .+|+++++.|+..+++. |++.++...... .+.. .... ..++|++.+|+
T Consensus 131 Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~----~l~~--~~~~-~~~~P~g~~iy 199 (302)
T 3s25_A 131 LYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA----LFYD--CNCY-KPVVLDDTNVY 199 (302)
T ss_dssp EEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE----EEEC--SCEE-EEEEEETTEEE
T ss_pred EEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE----EEeC--CCcc-ceeeecCCEEE
Confidence 7777777555444444432 45788999999887643 888888766532 2222 2222 34679999888
Q ss_pred EEEeeCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecCCCCCcce
Q 004203 252 LTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATR 331 (768)
Q Consensus 252 aS~svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d~~~Gs~~ 331 (768)
.+..... ..|...+........|... ..+.|++++++|++..+. -+..+
T Consensus 200 ~t~~~~~---------------------~~I~~~~ldG~~~~~Lt~~--------~~~~~~~~g~~Iy~~~~~--~~~~i 248 (302)
T 3s25_A 200 YMDVNRD---------------------NAIVHVNINNPNPVVLTEA--------NIEHYNVYGSLIFYQRGG--DNPAL 248 (302)
T ss_dssp EEEGGGT---------------------TEEEEECSSSCCCEECSCS--------CEEEEEEETTEEEEEECS--SSCEE
T ss_pred EEEcCCC---------------------cEEEEEECCCCCeEEEeCC--------CcceEEECCCEEEEEECC--CCcEE
Confidence 7643110 0222222222222222111 126699999999764222 24788
Q ss_pred EEeccCCCceeeeec
Q 004203 332 TQQSLRSSSSVRLLT 346 (768)
Q Consensus 332 ~~~~~~ss~~~rl~~ 346 (768)
....++++.+++|+.
T Consensus 249 ~~~~~DG~~r~~l~~ 263 (302)
T 3s25_A 249 CVVKNDGTGFKELAK 263 (302)
T ss_dssp EEEETTSCCCEEEEE
T ss_pred EEEECCCCccEEeeC
Confidence 888999988887765
No 261
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.00 E-value=0.0076 Score=63.99 Aligned_cols=139 Identities=6% Similarity=-0.057 Sum_probs=89.6
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC------CC-------CCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEec
Q 004203 81 RRGLASWVEAESLHHLRPKYCPLS------PP-------PRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~L~------gH-------~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~g 147 (768)
+..++....++.|..+|.+++++. .. ...+.+ ....++..++.++.++.|+.+|.++|+.+..+..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 456666677778888887766321 10 122322 1222467888899999999999999998877765
Q ss_pred CCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCe------EEEEEcCCCCEEEEEE-CCeEEEEEcC
Q 004203 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPI------ASIAFHASGELLAVAS-GHKLYIWRYN 220 (768)
Q Consensus 148 H~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V------~svafSPDG~~LatgS-dd~I~IWDl~ 220 (768)
........... +..++.++.++.|+.+|.++|+.+........+ ...... +..+++++ ++.+..+|..
T Consensus 132 ~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 132 AGEALSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp SSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETT
T ss_pred CCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECC
Confidence 43322222332 356777888999999999999988776543332 112222 34566666 4569999998
Q ss_pred CCccc
Q 004203 221 MREET 225 (768)
Q Consensus 221 t~~~~ 225 (768)
+++..
T Consensus 207 tG~~~ 211 (376)
T 3q7m_A 207 QGQMI 211 (376)
T ss_dssp TCCEE
T ss_pred CCcEE
Confidence 87653
No 262
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.98 E-value=0.0038 Score=66.37 Aligned_cols=132 Identities=11% Similarity=0.045 Sum_probs=87.0
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC--CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecC-CCCcEEEEE
Q 004203 81 RRGLASWVEAESLHHLRPKYCPLS--PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH-RRTPWVVRF 157 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~L~--gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH-~g~V~sVaf 157 (768)
+..++.+..++.+..+|..++++. ........+.. ++..|+.++.++.|..+|.++|+.+...... ...+.....
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~ 316 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL 316 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE
Confidence 456677778888999998876422 11223444444 4678888999999999999999988776522 222323333
Q ss_pred ccCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCCeEEEEEcCCCCEEEEEE-CCeEEEEE
Q 004203 158 HPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-YRPIASIAFHASGELLAVAS-GHKLYIWR 218 (768)
Q Consensus 158 SP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h-~~~V~svafSPDG~~LatgS-dd~I~IWD 218 (768)
.+..++.++.++.|+++|.++|+.+..... ...+....... +..|++++ ++.|+.||
T Consensus 317 ---~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~-~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 317 ---YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAA-DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ---ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEE-TTEEEEEBTTSCEEEEE
T ss_pred ---ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEE-CCEEEEEeCCCEEEEEe
Confidence 246788888999999999999998877654 23332211112 44566666 45688886
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.96 E-value=0.1 Score=55.92 Aligned_cols=160 Identities=11% Similarity=0.011 Sum_probs=101.9
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEE
Q 004203 81 RRGLASWVEAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~L----~gH~~~VtslafSPDG~~L-aSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sV 155 (768)
+...++-...+.|..++...... ........++++.+.+..| ++-...+.|.+.+++.......+.........+
T Consensus 85 ~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~i 164 (349)
T 3v64_C 85 ELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAI 164 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEE
T ss_pred cEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceE
Confidence 33334445667888888765421 1223456789999855555 455567899999987655444444444568899
Q ss_pred EEccCCCCEEEEEeCC-CeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCeEe
Q 004203 156 RFHPLNPTIIASGSLD-HEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSSPRIV 231 (768)
Q Consensus 156 afSP~dg~lLaSgS~D-gtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSd--d~I~IWDl~t~~~~~~~~~l 231 (768)
+++|.++.++.+-..+ +.|..+++.......... .-...+.++|+|++..|+.+.. +.|..+|++..... ..+
T Consensus 165 avdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~---~~~ 241 (349)
T 3v64_C 165 ALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK---AVI 241 (349)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EEE
T ss_pred EEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE---EEE
Confidence 9999555555555555 789999887543332222 2335688999999888888773 44999998754321 122
Q ss_pred ecCCCCeEEEEE
Q 004203 232 LRTRRSLRAVHF 243 (768)
Q Consensus 232 ~~h~~~V~sVaF 243 (768)
.........+++
T Consensus 242 ~~~~~~P~giav 253 (349)
T 3v64_C 242 SQGLPHPFAITV 253 (349)
T ss_dssp CSSCSSEEEEEE
T ss_pred eCCCCCceEEEE
Confidence 233456678888
No 264
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.91 E-value=0.012 Score=65.25 Aligned_cols=141 Identities=11% Similarity=0.130 Sum_probs=88.4
Q ss_pred CeEEEEECC-CCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeC-CC----eEEEEECCCC
Q 004203 109 STIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSL-DH----EVRLWNASTA 182 (768)
Q Consensus 109 ~VtslafSP-DG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~-Dg----tVrLWDl~sg 182 (768)
....++|+| ++..|+.+...+.|+++|+++++...... .......++|++ +++.|+.+.. ++ .+..++. .+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 457899998 46677777666899999998877554443 455688999999 7875555443 22 3444443 33
Q ss_pred cEE--EEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 183 ECI--GSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 183 ~~i--~~l~h~~~V~svafSPDG~~LatgS--dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
... ..+........++++|++..|+++. .++|+.+|........ ..........+.++|+|+|++|.++.
T Consensus 215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~--~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTP--LFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEE--EEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEE--EEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 222 2232233456788999443444444 4569999987664311 11122234678999999999666553
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.87 E-value=0.014 Score=67.25 Aligned_cols=137 Identities=10% Similarity=0.048 Sum_probs=88.1
Q ss_pred CCCCC---EEEEEeCCCeEEEEeCCCCeEEEEEecCC-------------CCc--------------------------E
Q 004203 116 SPDGK---TLASTHGDHTVKIIDCQTGSCLKVLHGHR-------------RTP--------------------------W 153 (768)
Q Consensus 116 SPDG~---~LaSgS~DgtVrVWDl~tg~~l~~l~gH~-------------g~V--------------------------~ 153 (768)
..||+ .++.++.+|.++++|.++|+.+..++-.. .++ .
T Consensus 310 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~ 389 (571)
T 2ad6_A 310 PVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQG 389 (571)
T ss_dssp EETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSC
T ss_pred ccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCC
Confidence 34784 67788899999999999999887664221 111 2
Q ss_pred EEEEccCCCCEEEEEe-------------------------------------CCCeEEEEECCCCcEEEEecCCCCeEE
Q 004203 154 VVRFHPLNPTIIASGS-------------------------------------LDHEVRLWNASTAECIGSRDFYRPIAS 196 (768)
Q Consensus 154 sVafSP~dg~lLaSgS-------------------------------------~DgtVrLWDl~sg~~i~~l~h~~~V~s 196 (768)
.++++| +..+++... .++.|..||+.+++.+..+.....+..
T Consensus 390 ~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~ 468 (571)
T 2ad6_A 390 VDSYDP-ESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWG 468 (571)
T ss_dssp BCEEET-TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCS
T ss_pred CceECC-CCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccc
Confidence 357788 555555432 357899999999998887765544443
Q ss_pred EEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 197 IAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 197 vafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
..+...+..+++++ ++.|+.||.++++... .........-..+.+..+|+.++....
T Consensus 469 ~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw--~~~~~~~~~~~p~~~~~~G~~yv~~~~ 526 (571)
T 2ad6_A 469 GTLYTKGGLVWYATLDGYLKALDNKDGKELW--NFKMPSGGIGSPMTYSFKGKQYIGSMY 526 (571)
T ss_dssp BCEEETTTEEEEECTTSEEEEEETTTCCEEE--EEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred eeEEECCCEEEEEcCCCeEEEEECCCCCEEE--EEeCCCCcEeeeEEEEECCEEEEEEEC
Confidence 33344566677776 4569999999988754 111122111223446688886665544
No 266
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.83 E-value=0.079 Score=55.01 Aligned_cols=151 Identities=9% Similarity=0.107 Sum_probs=99.7
Q ss_pred CCCCCCCCeEEEEECCCCCEEEE-EeCCCeEEEEeCCCCeEEEEEecC-CCCcEEEEEccCCCCEEEEEeCCCeEEEEEC
Q 004203 102 PLSPPPRSTIAAAFSPDGKTLAS-THGDHTVKIIDCQTGSCLKVLHGH-RRTPWVVRFHPLNPTIIASGSLDHEVRLWNA 179 (768)
Q Consensus 102 ~L~gH~~~VtslafSPDG~~LaS-gS~DgtVrVWDl~tg~~l~~l~gH-~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl 179 (768)
.+.+-...+.+++|+|+++.|++ ...++.|...|.. ++.++.+.-. ......|++.+ ++.++++.-.++.+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEc
Confidence 45566678999999998766654 6668899999998 8888777422 24577889988 7777777667889999988
Q ss_pred CCCcE---EEEe--c-----CCCCeEEEEEcCCCCEEEEEECCe-EEEEEcCCCccccCCeEee--------cCCCCeEE
Q 004203 180 STAEC---IGSR--D-----FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVL--------RTRRSLRA 240 (768)
Q Consensus 180 ~sg~~---i~~l--~-----h~~~V~svafSPDG~~LatgSdd~-I~IWDl~t~~~~~~~~~l~--------~h~~~V~s 240 (768)
..... +... . .+.....++|+|+++.|+++.... ..+|.++...... ...+. .....+.+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~-~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSN-ELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSS-CCEEEECHHHHHTCCSSCCCE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCC-ceeeecchhhccccccCCcee
Confidence 75442 1222 1 234568999999998888877543 4444443110000 01111 12346799
Q ss_pred EEEccCCCeEEEEEe
Q 004203 241 VHFHPHAAPLLLTAE 255 (768)
Q Consensus 241 VaFSPDG~~LlaS~s 255 (768)
++|+|....+++.+.
T Consensus 178 l~~dp~tg~lliLS~ 192 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSH 192 (255)
T ss_dssp EEEETTTTEEEEEET
T ss_pred EEEcCCCCeEEEEEC
Confidence 999998766665553
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.82 E-value=0.079 Score=57.57 Aligned_cols=160 Identities=11% Similarity=0.014 Sum_probs=100.6
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEeCCCCeEEEEEecCCCCcEEE
Q 004203 81 RRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~----L~gH~~~VtslafSPDG~~La-SgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sV 155 (768)
+...++-...+.|..++..... +.........+++++.+..|+ +-...+.|.+.+++.......+.........+
T Consensus 128 ~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~gi 207 (386)
T 3v65_B 128 ELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAI 207 (386)
T ss_dssp TEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEE
T ss_pred CeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEE
Confidence 3334444566778888876542 112223456788988555554 55557899999987655444454444668899
Q ss_pred EEccCCCCEEEEEeCC-CeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCeEe
Q 004203 156 RFHPLNPTIIASGSLD-HEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSSPRIV 231 (768)
Q Consensus 156 afSP~dg~lLaSgS~D-gtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSd--d~I~IWDl~t~~~~~~~~~l 231 (768)
+++|.++.++.+-..+ +.|..+++.......... .-...+.++|+|++..|+.+.. +.|..+|++..... ..+
T Consensus 208 avdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~---~~~ 284 (386)
T 3v65_B 208 ALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK---AVI 284 (386)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE---EEE
T ss_pred EEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE---EEE
Confidence 9999455555554444 689989887544333332 2335688999999888888773 44999998654321 122
Q ss_pred ecCCCCeEEEEE
Q 004203 232 LRTRRSLRAVHF 243 (768)
Q Consensus 232 ~~h~~~V~sVaF 243 (768)
.........|++
T Consensus 285 ~~~~~~P~giav 296 (386)
T 3v65_B 285 SQGLPHPFAITV 296 (386)
T ss_dssp CSSCSSEEEEEE
T ss_pred ECCCCCceEEEE
Confidence 233456678888
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.82 E-value=0.034 Score=64.20 Aligned_cols=162 Identities=9% Similarity=0.056 Sum_probs=97.3
Q ss_pred CeEEEEeCCCCC------CCCCC--------CCeEEEEEC-CCCC---EEEEEeCCCeEEEEeCCCCeEEEEEecCC---
Q 004203 91 ESLHHLRPKYCP------LSPPP--------RSTIAAAFS-PDGK---TLASTHGDHTVKIIDCQTGSCLKVLHGHR--- 149 (768)
Q Consensus 91 gsIrlWd~~t~~------L~gH~--------~~VtslafS-PDG~---~LaSgS~DgtVrVWDl~tg~~l~~l~gH~--- 149 (768)
+.|.-+|..+++ +..|. ..+. +... .+|+ .++.++.+|.++++|.++|+.+..+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 467777777663 22232 2222 2332 4774 78889999999999999999887665331
Q ss_pred ---------CC---------------------------------cEEEEEccCCCCEEEEEe------------------
Q 004203 150 ---------RT---------------------------------PWVVRFHPLNPTIIASGS------------------ 169 (768)
Q Consensus 150 ---------g~---------------------------------V~sVafSP~dg~lLaSgS------------------ 169 (768)
+. -..++++|+.+.+++...
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 00 012466773333333221
Q ss_pred --------------CCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEeecC
Q 004203 170 --------------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRT 234 (768)
Q Consensus 170 --------------~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l~~h 234 (768)
.++.|+.||+.+++.+.......++..-.....+.++++++ ++.++.||.++++.... .....
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~--~~~~~ 527 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWK--FQTGS 527 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEE--EECSS
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEE--ecCCC
Confidence 25789999999999887765443332222223466777777 45699999999987541 11111
Q ss_pred CCCeEEEEEccCCCeEEEEEe
Q 004203 235 RRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 235 ~~~V~sVaFSPDG~~LlaS~s 255 (768)
...-.-+.|..+|+.+++...
T Consensus 528 g~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 528 GIVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp CCCSCCEEEEETTEEEEEEEE
T ss_pred CcccCceEEEECCEEEEEEEc
Confidence 111223667789986665543
No 269
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.82 E-value=0.056 Score=60.00 Aligned_cols=139 Identities=14% Similarity=0.131 Sum_probs=86.9
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCC----C-eEEEEeCCCCeE-EEEEecCCCC
Q 004203 81 RRGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGD----H-TVKIIDCQTGSC-LKVLHGHRRT 151 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~---L~gH~~~VtslafSPDG~~LaSgS~D----g-tVrVWDl~tg~~-l~~l~gH~g~ 151 (768)
...|+.....+.|+.++...++ +........+++|+++|+ |+.+... . .+..++...+.. ...+. ....
T Consensus 152 ~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~ 229 (433)
T 4hw6_A 152 YDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARG 229 (433)
T ss_dssp TCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSS
T ss_pred CCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCC
Confidence 3455544444788889886653 334455689999999999 5554432 1 244444332211 11222 2334
Q ss_pred cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE-ec--CCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCC
Q 004203 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-RD--FYRPIASIAFHASGELLAVASG--HKLYIWRYNM 221 (768)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~-l~--h~~~V~svafSPDG~~LatgSd--d~I~IWDl~t 221 (768)
...++++|.++.++++-..++.|+.+|..+++.... +. ....-..++|+|+|++|+++.. +.|+.+|++.
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 566889986677666666778999999987776322 22 2222346999999997777763 4599988763
No 270
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.77 E-value=0.061 Score=63.46 Aligned_cols=173 Identities=12% Similarity=0.019 Sum_probs=116.2
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCCCCC-------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEE
Q 004203 73 IFEAGRDARRGLASWVEAESLHHLRPKYCPLS-------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVL 145 (768)
Q Consensus 73 l~~a~~d~g~~LvSgs~DgsIrlWd~~t~~L~-------gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l 145 (768)
+.....+....|+.+..++-|..++..+.++. .....|.++...++|.+.+ |+.++-|.+||.++++.....
T Consensus 365 v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~ 443 (781)
T 3v9f_A 365 VSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIE 443 (781)
T ss_dssp EEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECC
T ss_pred eEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEec
Confidence 33444566677888887777888887654221 2345799999988876554 677677999998887643322
Q ss_pred e--cCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecC------CCCeEEEEEcCCCCEEEEEECCeEEEE
Q 004203 146 H--GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF------YRPIASIAFHASGELLAVASGHKLYIW 217 (768)
Q Consensus 146 ~--gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h------~~~V~svafSPDG~~LatgSdd~I~IW 217 (768)
. -....|.++...+ ++.+.+ |+. +-|..||..+++....... ...|.++...++|.+.+...++++..|
T Consensus 444 ~~~~~~~~v~~i~~d~-~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~ 520 (781)
T 3v9f_A 444 LEKNELLDVRVFYEDK-NKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIY 520 (781)
T ss_dssp STTTCCCCEEEEEECT-TSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEE
T ss_pred cCCCCCCeEEEEEECC-CCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEE
Confidence 1 1345688888777 565444 444 5699999988765443221 357899999999987665545779999
Q ss_pred EcCCCccccCCeEee-c---CCCCeEEEEEccCCCeEEEE
Q 004203 218 RYNMREETSSPRIVL-R---TRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 218 Dl~t~~~~~~~~~l~-~---h~~~V~sVaFSPDG~~LlaS 253 (768)
|..+.+... .. . ....|.++...++|...+.+
T Consensus 521 ~~~~~~~~~----~~~~~~l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 521 TPDMQLVRK----FNQYEGFCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp CTTCCEEEE----ECTTTTCSCSCEEEEEECTTSCEEEEE
T ss_pred eCCCCeEEE----ccCCCCCCCCeeEEEEECCCCCEEEEE
Confidence 887654321 11 1 24578999999999966654
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.74 E-value=0.034 Score=61.58 Aligned_cols=139 Identities=13% Similarity=0.040 Sum_probs=91.1
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCeEE--EEEecCCC
Q 004203 81 RRGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCL--KVLHGHRR 150 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~---L~gH~~~VtslafSPDG~~LaSgS~D-----gtVrVWDl~tg~~l--~~l~gH~g 150 (768)
+..|+.....+.|+.+|..... +.........++|+++|++|+.+... ..+.+++.+ +... ..+.. ..
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~-~~ 226 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTK-GQ 226 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEE-CS
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeecc-CC
Confidence 3445555444788888887652 23345568899999999977766541 234445533 3221 23322 23
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec--CCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcCC
Q 004203 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVAS--GHKLYIWRYNM 221 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~--h~~~V~svafSPDG~~LatgS--dd~I~IWDl~t 221 (768)
....++++|+++.++++-..++.|+.+|...+....... .......++|+|+|++|++.. .+.|++++++.
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 456789999667777776677899999998776533322 223467899999999777776 34599988764
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.73 E-value=0.29 Score=51.38 Aligned_cols=163 Identities=10% Similarity=-0.009 Sum_probs=98.5
Q ss_pred EEEEeCCCeEEEEeCCC----CC----CCCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEeCCCCeEEEEEecCCCCcEE
Q 004203 84 LASWVEAESLHHLRPKY----CP----LSPPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (768)
Q Consensus 84 LvSgs~DgsIrlWd~~t----~~----L~gH~~~VtslafSPDG~~La-SgS~DgtVrVWDl~tg~~l~~l~gH~g~V~s 154 (768)
.++-...+.|..++... .. +...-....++++++.+..|+ +-...+.|.++|++.......+.........
T Consensus 45 y~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~ 124 (316)
T 1ijq_A 45 YWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRA 124 (316)
T ss_dssp EEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEE
T ss_pred EEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcce
Confidence 33444556777777654 11 112224567899987555555 4466889999998765544444444456889
Q ss_pred EEEccCCCCEEEEEeCC-CeEEEEECCCCcEEEEe--cCCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCe
Q 004203 155 VRFHPLNPTIIASGSLD-HEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSSPR 229 (768)
Q Consensus 155 VafSP~dg~lLaSgS~D-gtVrLWDl~sg~~i~~l--~h~~~V~svafSPDG~~LatgSd--d~I~IWDl~t~~~~~~~~ 229 (768)
++++|.++.++.+.... +.|...++... ....+ ..-...+.++|++++..|+.+.. +.|..+|++.... .
T Consensus 125 iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~----~ 199 (316)
T 1ijq_A 125 IVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR----K 199 (316)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----E
T ss_pred EEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCce----E
Confidence 99999455444444333 68888888643 33332 22345779999999988888774 4599999875332 1
Q ss_pred Eeec---CCCCeEEEEEccCCCeEEEE
Q 004203 230 IVLR---TRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 230 ~l~~---h~~~V~sVaFSPDG~~LlaS 253 (768)
.+.. .......+++. +..+..+
T Consensus 200 ~~~~~~~~~~~P~giav~--~~~ly~~ 224 (316)
T 1ijq_A 200 TILEDEKRLAHPFSLAVF--EDKVFWT 224 (316)
T ss_dssp EEEECTTTTSSEEEEEEE--TTEEEEE
T ss_pred EEeecCCccCCcEEEEEE--CCEEEEE
Confidence 2221 23456778874 3345444
No 273
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.73 E-value=0.059 Score=57.20 Aligned_cols=163 Identities=10% Similarity=-0.032 Sum_probs=103.8
Q ss_pred CCCeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCEEE-EEeCCCeEEEEeCCCCeE-EEEEecCCCCcEEEEEccCC
Q 004203 89 EAESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSC-LKVLHGHRRTPWVVRFHPLN 161 (768)
Q Consensus 89 ~DgsIrlWd~~t~~L-----~gH~~~VtslafSPDG~~La-SgS~DgtVrVWDl~tg~~-l~~l~gH~g~V~sVafSP~d 161 (768)
....|+.+++..... ......+.+++|++.+..|+ +-...+.|+.++++.+.. ...+...-.....+++.+.+
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 345677777765420 11123467899998555554 545678999999887642 22333233456778998756
Q ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEeecCCCC
Q 004203 162 PTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRS 237 (768)
Q Consensus 162 g~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~~LatgSd---d~I~IWDl~t~~~~~~~~~l~~h~~~ 237 (768)
+.++++-...+.|.++++......... ........++++|.+..|+.+.. ++|...+++..... ......-..
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~---~~~~~~l~~ 167 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF---IIINSEIYW 167 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCSC
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE---EEEECCCCC
Confidence 666666667789999998764433333 33456789999998777777662 34888887654321 122233456
Q ss_pred eEEEEEccCCCeEEEEE
Q 004203 238 LRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 238 V~sVaFSPDG~~LlaS~ 254 (768)
.+.|+|+|++..|..+-
T Consensus 168 Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp EEEEEEETTTTEEEEEE
T ss_pred ccEEEEeccCCEEEEEE
Confidence 79999999887776653
No 274
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.61 E-value=0.068 Score=62.07 Aligned_cols=136 Identities=11% Similarity=0.063 Sum_probs=85.5
Q ss_pred CCC---CEEEEEeCCCeEEEEeCCCCeEEEEEecCC------------C-Cc--------------------------EE
Q 004203 117 PDG---KTLASTHGDHTVKIIDCQTGSCLKVLHGHR------------R-TP--------------------------WV 154 (768)
Q Consensus 117 PDG---~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~------------g-~V--------------------------~s 154 (768)
.+| +.++.++.+|.++++|.++|+.+....... + ++ ..
T Consensus 318 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 397 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGH 397 (599)
T ss_dssp TTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCC
Confidence 578 567888999999999999999887654211 1 11 13
Q ss_pred EEEccCCCCEEEEE---------------------------------e------CCCeEEEEECCCCcEEEEecCCCCeE
Q 004203 155 VRFHPLNPTIIASG---------------------------------S------LDHEVRLWNASTAECIGSRDFYRPIA 195 (768)
Q Consensus 155 VafSP~dg~lLaSg---------------------------------S------~DgtVrLWDl~sg~~i~~l~h~~~V~ 195 (768)
++++| +..+++.. + .++.|.-||+.+++.+....+..+..
T Consensus 398 ~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~ 476 (599)
T 1w6s_A 398 DSYDP-KRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVW 476 (599)
T ss_dssp CEEET-TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCC
T ss_pred ccCCC-CCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCcc
Confidence 56777 44444332 1 34789999999999887765443322
Q ss_pred EEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 196 SIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 196 svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
.-.....+.++++++ ++.++.||.++++.... ..........-+.|..+|+.+++...
T Consensus 477 ~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~--~~l~~g~~~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 477 GGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK--FKIPSGAIGYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp SBCEEETTTEEEEECTTSEEEEEETTTCCEEEE--EECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CcceEecCCEEEEECCCCeEEEEECCCCCEEEE--eeCCCCcEeccEEEEeCCEEEEEEEc
Confidence 212233566677777 45699999999987541 11222222233566788986665544
No 275
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.45 E-value=0.13 Score=53.26 Aligned_cols=141 Identities=12% Similarity=-0.008 Sum_probs=83.1
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCCeE-EEEEec---------CCCCcEEEEEccCCCC-EEEEEeCCCeEEEEE
Q 004203 110 TIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC-LKVLHG---------HRRTPWVVRFHPLNPT-IIASGSLDHEVRLWN 178 (768)
Q Consensus 110 VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~-l~~l~g---------H~g~V~sVafSP~dg~-lLaSgS~DgtVrLWD 178 (768)
...++..+++..+++-..++.|+++|..+++. +....+ .-...+.+ +| +++ ++++-...+.|+.+|
T Consensus 119 ~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~-dg~~lyv~d~~~~~I~~~~ 195 (306)
T 2p4o_A 119 LNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR-FGNFLYVSNTEKMLLLRIP 195 (306)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE-ETTEEEEEETTTTEEEEEE
T ss_pred cCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc-CCCEEEEEeCCCCEEEEEE
Confidence 45666666555555555689999999876532 221111 11224445 78 555 445555677999999
Q ss_pred CCC-CcE--EEEecCCCCeEEEEEcCCCCEEEEEE-CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEc---cCCCeEE
Q 004203 179 AST-AEC--IGSRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFH---PHAAPLL 251 (768)
Q Consensus 179 l~s-g~~--i~~l~h~~~V~svafSPDG~~LatgS-dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFS---PDG~~Ll 251 (768)
+.. ++. ...+........++++++|+++++.. .+.|.++|.. ++... ...+......+.+++|. ||++.|+
T Consensus 196 ~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~-~~~~~~~~~~p~~~a~~g~~~d~~~Ly 273 (306)
T 2p4o_A 196 VDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTI-IAQAEQGVIGSTAVAFGQTEGDCTAIY 273 (306)
T ss_dssp BCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEE-EECGGGTCTTEEEEEECCSTTTTTEEE
T ss_pred eCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEE-EeecccccCCceEEEEecccCCCCEEE
Confidence 875 332 12222123456789999998655544 4569999865 32211 00111223678999999 8988777
Q ss_pred EEEe
Q 004203 252 LTAE 255 (768)
Q Consensus 252 aS~s 255 (768)
++..
T Consensus 274 Vt~~ 277 (306)
T 2p4o_A 274 VVTN 277 (306)
T ss_dssp EEEC
T ss_pred EECC
Confidence 7665
No 276
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.44 E-value=0.4 Score=55.88 Aligned_cols=162 Identities=7% Similarity=-0.055 Sum_probs=109.7
Q ss_pred CCCeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCC
Q 004203 89 EAESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNP 162 (768)
Q Consensus 89 ~DgsIrlWd~~t~~L-----~gH~~~VtslafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg 162 (768)
....|+..+++.... ...-..+.+++|++++..|+.+ ..++.|+.++++.......+......+..+++.+.++
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 566788888775421 1233568899999966666544 5578999999886655455543334577899987456
Q ss_pred CEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEeecCCCCe
Q 004203 163 TIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRSL 238 (768)
Q Consensus 163 ~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~~LatgSd---d~I~IWDl~t~~~~~~~~~l~~h~~~V 238 (768)
+++.+-...+.|.+.|+......... ..-.....++++|....|+.... ++|...+++.... ..+...-...
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~----~~l~~~~~~P 168 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER----TTLVPNVGRA 168 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC----EEEECSCSSE
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce----EEEECCCCCc
Confidence 66666666789999999765433322 33345689999997777776652 3488888766543 2233455678
Q ss_pred EEEEEccCCCeEEEEE
Q 004203 239 RAVHFHPHAAPLLLTA 254 (768)
Q Consensus 239 ~sVaFSPDG~~LlaS~ 254 (768)
..|+++++++.|..+-
T Consensus 169 ~GlalD~~~~~LY~aD 184 (628)
T 4a0p_A 169 NGLTIDYAKRRLYWTD 184 (628)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred ceEEEccccCEEEEEE
Confidence 9999999887776653
No 277
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.41 E-value=0.22 Score=58.73 Aligned_cols=174 Identities=4% Similarity=-0.072 Sum_probs=115.5
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEeCCCCCCC-------------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Q 004203 73 IFEAGRDARRGLASWVEAESLHHLRPKYCPLS-------------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG 139 (768)
Q Consensus 73 l~~a~~d~g~~LvSgs~DgsIrlWd~~t~~L~-------------gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg 139 (768)
+.....|....|+.+..++-|..++.....+. -....|.++...++|++ ..|+.++-|.+||..++
T Consensus 315 v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~ 393 (781)
T 3v9f_A 315 ARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINVFENGKR 393 (781)
T ss_dssp EEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEEEETTEE
T ss_pred EEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEEEECCCC
Confidence 44445566778888988888888887755321 12356999999888765 45666666899998765
Q ss_pred eEEEEE---ecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec---CCCCeEEEEEcCCCCEEEEEECCe
Q 004203 140 SCLKVL---HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHASGELLAVASGHK 213 (768)
Q Consensus 140 ~~l~~l---~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~---h~~~V~svafSPDG~~LatgSdd~ 213 (768)
+..... ......|.++...+ ++.+.+ |+.++-|..+|..+++...... ....|.++...++|.+.+ ++.++
T Consensus 394 ~~~~~~~~~~~~~~~v~~i~~d~-~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~~G 470 (781)
T 3v9f_A 394 VAIYNKENRELLSNSVLCSLKDS-EGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTHAG 470 (781)
T ss_dssp EEECC-----CCCSBEEEEEECT-TSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EETTE
T ss_pred eEEEccCCCCCCCcceEEEEECC-CCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EECCc
Confidence 432211 12235688888776 566554 6666779999998876544321 245788998888887544 45578
Q ss_pred EEEEEcCCCccccCCeEeecC-----CCCeEEEEEccCCCeEEEE
Q 004203 214 LYIWRYNMREETSSPRIVLRT-----RRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 214 I~IWDl~t~~~~~~~~~l~~h-----~~~V~sVaFSPDG~~LlaS 253 (768)
|.+||..+++... ..... ...|.++...++|...+.+
T Consensus 471 l~~~~~~~~~~~~---~~~~~~~~~~~~~i~~i~~d~~g~lWigt 512 (781)
T 3v9f_A 471 VFVIDLASKKVIH---HYDTSNSQLLENFVRSIAQDSEGRFWIGT 512 (781)
T ss_dssp EEEEESSSSSCCE---EECTTTSSCSCSCEEEEEECTTCCEEEEE
T ss_pred eEEEeCCCCeEEe---cccCcccccccceeEEEEEcCCCCEEEEE
Confidence 9999987765322 11111 3679999999999866655
No 278
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.39 E-value=0.45 Score=51.89 Aligned_cols=166 Identities=8% Similarity=-0.028 Sum_probs=101.7
Q ss_pred EEEEeCCCeEEEEeCCCC-------C-CCCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEeCCCCeEEEEEecCCCCcEE
Q 004203 84 LASWVEAESLHHLRPKYC-------P-LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (768)
Q Consensus 84 LvSgs~DgsIrlWd~~t~-------~-L~gH~~~VtslafSPDG~~L-aSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~s 154 (768)
.++-...+.|..+++... . +........++++.+.++.| ++-...+.|.+.|++.......+.........
T Consensus 127 ywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~ 206 (400)
T 3p5b_L 127 YWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRA 206 (400)
T ss_dssp EEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEE
T ss_pred EEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcce
Confidence 334445677877777541 1 12234567899999854444 45556789999999876655555545556889
Q ss_pred EEEccCCCCEEEEEeC-CCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCeE
Q 004203 155 VRFHPLNPTIIASGSL-DHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSSPRI 230 (768)
Q Consensus 155 VafSP~dg~lLaSgS~-DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSd--d~I~IWDl~t~~~~~~~~~ 230 (768)
|++.|.++.++.+-.. .+.|...++.......... .-...+.+++++++..|+.+.. +.|..+|++...... .
T Consensus 207 iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~---~ 283 (400)
T 3p5b_L 207 IVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT---I 283 (400)
T ss_dssp EEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEE---E
T ss_pred EEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEE---E
Confidence 9999944444444322 3689999987544333332 2246789999999998888873 459999987543211 1
Q ss_pred eec--CCCCeEEEEEccCCCeEEEEE
Q 004203 231 VLR--TRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 231 l~~--h~~~V~sVaFSPDG~~LlaS~ 254 (768)
... .......|++ ++..++.+.
T Consensus 284 ~~~~~~l~~P~gl~v--~~~~lywtd 307 (400)
T 3p5b_L 284 LEDEKRLAHPFSLAV--FEDKVFWTD 307 (400)
T ss_dssp EECSSTTSSEEEEEE--ETTEEEEEE
T ss_pred EeCCCCCCCCEEEEE--eCCEEEEec
Confidence 221 1234566776 334455443
No 279
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.34 E-value=0.061 Score=61.16 Aligned_cols=144 Identities=10% Similarity=0.060 Sum_probs=89.4
Q ss_pred CeEEEEECC-CCCEEEEEeC-CCeEEEEeCCCCeEEEEEecCC---CCcEEEEE-------ccCCCCEEEEEeCCC----
Q 004203 109 STIAAAFSP-DGKTLASTHG-DHTVKIIDCQTGSCLKVLHGHR---RTPWVVRF-------HPLNPTIIASGSLDH---- 172 (768)
Q Consensus 109 ~VtslafSP-DG~~LaSgS~-DgtVrVWDl~tg~~l~~l~gH~---g~V~sVaf-------SP~dg~lLaSgS~Dg---- 172 (768)
....|+|+| ++..|+.+.. .+.|++.|++++.....+.... .....++| ++ +++.|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCCCcc
Confidence 467999999 4555555554 4789999999887665554322 24788999 99 777555555443
Q ss_pred ---eEEEEECCC-CcEE-----EEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcC-------CCccc-----c---
Q 004203 173 ---EVRLWNAST-AECI-----GSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYN-------MREET-----S--- 226 (768)
Q Consensus 173 ---tVrLWDl~s-g~~i-----~~l~h~~~V~svafSPDG~~LatgS--dd~I~IWDl~-------t~~~~-----~--- 226 (768)
.|.+++... ++.. ..+........++.+|++..|+++. .+.|+.+|+. ++... .
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 366776443 2221 2222222345678899777666666 3459999997 44430 0
Q ss_pred --CCeEeecCCCCeEEEEEccCCCeEEEE
Q 004203 227 --SPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 227 --~~~~l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
............+.|+|+|+|++|.++
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYva 327 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFG 327 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEE
Confidence 011112234557899999999965544
No 280
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.32 E-value=0.069 Score=57.68 Aligned_cols=142 Identities=11% Similarity=0.089 Sum_probs=93.5
Q ss_pred eEEEEECCCCCEEEEEe-CCCeEEEEeCCCCeEEEEEecC-----CC--CcEEEEE---ccCCCCEEEEEe---------
Q 004203 110 TIAAAFSPDGKTLASTH-GDHTVKIIDCQTGSCLKVLHGH-----RR--TPWVVRF---HPLNPTIIASGS--------- 169 (768)
Q Consensus 110 VtslafSPDG~~LaSgS-~DgtVrVWDl~tg~~l~~l~gH-----~g--~V~sVaf---SP~dg~lLaSgS--------- 169 (768)
-.+++|.+....|+.++ ..++|..||...+......... .. .+..+.| .| ++++++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETTTTCTTS
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEcccccccccc
Confidence 35788988666666666 6999999999866544332211 11 2568999 68 677777544
Q ss_pred ----CCCeEEEEECC---CCcEEEEecC--------------CCCeEEEEEcCCCCEEEEEE-C-CeEEEEEcCCCcccc
Q 004203 170 ----LDHEVRLWNAS---TAECIGSRDF--------------YRPIASIAFHASGELLAVAS-G-HKLYIWRYNMREETS 226 (768)
Q Consensus 170 ----~DgtVrLWDl~---sg~~i~~l~h--------------~~~V~svafSPDG~~LatgS-d-d~I~IWDl~t~~~~~ 226 (768)
.+..|..||+. +++.+..... ......++..++|+.-++.+ . +.|..++.+.....
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~- 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVS- 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEE-
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEe-
Confidence 26789999999 7877655431 12478999999999888777 4 45777766544221
Q ss_pred CCeEee----cCCCCeEEEEEccCCCeEEEEE
Q 004203 227 SPRIVL----RTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 227 ~~~~l~----~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
..... ......+.|+++|||+.|++..
T Consensus 173 -~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~ 203 (334)
T 2p9w_A 173 -TFAWESGNGGQRPGYSGITFDPHSNKLIAFG 203 (334)
T ss_dssp -EEEECCCCSSSCCSCSEEEEETTTTEEEEES
T ss_pred -eeeecCCCcccccCcceEEEeCCCCEEEEEc
Confidence 11111 1123467999999999777653
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.27 E-value=0.74 Score=47.67 Aligned_cols=145 Identities=12% Similarity=0.073 Sum_probs=87.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeE---EEEEe------cCCCCcEEEEEccCCCCEEEEEeCCC-eEEEE
Q 004203 108 RSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC---LKVLH------GHRRTPWVVRFHPLNPTIIASGSLDH-EVRLW 177 (768)
Q Consensus 108 ~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~---l~~l~------gH~g~V~sVafSP~dg~lLaSgS~Dg-tVrLW 177 (768)
....++++.+++.++++.-.++.+.++++..... +.... ........++|+|.++.++++...+. .|+.|
T Consensus 70 ~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 70 KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 5678999999998777766788999998765432 22222 12334688999994334555444444 55555
Q ss_pred EC-CCCcEEEEec--------CCCCeEEEEEcCCCCEEEEEECCe--EEEEEcCCCccccCCeEeec-------CCCCeE
Q 004203 178 NA-STAECIGSRD--------FYRPIASIAFHASGELLAVASGHK--LYIWRYNMREETSSPRIVLR-------TRRSLR 239 (768)
Q Consensus 178 Dl-~sg~~i~~l~--------h~~~V~svafSPDG~~LatgSdd~--I~IWDl~t~~~~~~~~~l~~-------h~~~V~ 239 (768)
+- .....+.... .-..+..++++|....|.+-++.. +.++|.... ... ...+.. .-....
T Consensus 150 ~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~-~~~L~~g~~~l~~~~~qpE 227 (255)
T 3qqz_A 150 NGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIG-EMSLTKGSRGLSHNIKQAE 227 (255)
T ss_dssp ESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEE-EEECSTTGGGCSSCCCSEE
T ss_pred cccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEE-EEEcCCccCCcccccCCCC
Confidence 51 1111112111 234678999999887777777543 888887654 221 112221 124678
Q ss_pred EEEEccCCCeEEEEEe
Q 004203 240 AVHFHPHAAPLLLTAE 255 (768)
Q Consensus 240 sVaFSPDG~~LlaS~s 255 (768)
.|+|.++|+ +.++++
T Consensus 228 Gia~d~~G~-lyIvsE 242 (255)
T 3qqz_A 228 GVAMDASGN-IYIVSE 242 (255)
T ss_dssp EEEECTTCC-EEEEET
T ss_pred eeEECCCCC-EEEEcC
Confidence 999999998 444443
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.25 E-value=0.093 Score=60.93 Aligned_cols=176 Identities=9% Similarity=-0.010 Sum_probs=104.1
Q ss_pred cCCCEEEEEe-CCCeEEEEeCCCCC---CC--CCCCCeEEEEECCCCCEEEEEe-CC-----CeEEEEeCCCCeEEEE--
Q 004203 79 DARRGLASWV-EAESLHHLRPKYCP---LS--PPPRSTIAAAFSPDGKTLASTH-GD-----HTVKIIDCQTGSCLKV-- 144 (768)
Q Consensus 79 d~g~~LvSgs-~DgsIrlWd~~t~~---L~--gH~~~VtslafSPDG~~LaSgS-~D-----gtVrVWDl~tg~~l~~-- 144 (768)
.++..++.|+ .+..+.+||..+.+ +. ...+.-.+++..+||++++.|+ .+ ..+.+||..+.+-...
T Consensus 252 ~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~ 331 (656)
T 1k3i_A 252 GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPN 331 (656)
T ss_dssp TTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETT
T ss_pred CCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCC
Confidence 3455556665 45689999988652 11 1122234566667999999888 34 5799999987653221
Q ss_pred -----------------------EecCCC---------------------------------------CcEEEEEccCCC
Q 004203 145 -----------------------LHGHRR---------------------------------------TPWVVRFHPLNP 162 (768)
Q Consensus 145 -----------------------l~gH~g---------------------------------------~V~sVafSP~dg 162 (768)
+-+..+ .-..+.|...++
T Consensus 332 ~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~ 411 (656)
T 1k3i_A 332 AKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKG 411 (656)
T ss_dssp SCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTT
T ss_pred ccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCC
Confidence 000000 012223323367
Q ss_pred CEEEEEeCCC-----------eEEEEECCCCcEEEEe----cCCCCeEEEEEcCCCCEEEEEEC------------CeEE
Q 004203 163 TIIASGSLDH-----------EVRLWNASTAECIGSR----DFYRPIASIAFHASGELLAVASG------------HKLY 215 (768)
Q Consensus 163 ~lLaSgS~Dg-----------tVrLWDl~sg~~i~~l----~h~~~V~svafSPDG~~LatgSd------------d~I~ 215 (768)
++++.|+.++ .|.+||..+.+..... .......+++..|+|+++++|+. ..+.
T Consensus 412 ~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~ 491 (656)
T 1k3i_A 412 KILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPE 491 (656)
T ss_dssp EEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCE
T ss_pred eEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceE
Confidence 7888877532 6888888877654433 22223345677889999999872 2389
Q ss_pred EEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 216 IWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 216 IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
+||..+.+.... ......+.......+.|||+.+++++.
T Consensus 492 ~ydp~t~~W~~~-~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 492 IYVPEQDTFYKQ-NPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEGGGTEEEEC-CCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred EEcCCCCceeec-CCCCCccccccHhhcCCCcEEEecCCC
Confidence 999987653221 111122333455667899997777664
No 283
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.17 E-value=0.35 Score=52.14 Aligned_cols=171 Identities=10% Similarity=0.028 Sum_probs=106.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC-----CCC----C--CCCeEEEEE---CCCCCEEEEEe-------------CCCeEEE
Q 004203 81 RRGLASWVEAESLHHLRPKYCP-----LSP----P--PRSTIAAAF---SPDGKTLASTH-------------GDHTVKI 133 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~-----L~g----H--~~~Vtslaf---SPDG~~LaSgS-------------~DgtVrV 133 (768)
+..+++-...+.|..|+...+. +.+ . ...+.++.| .|+++++++.. .+..|..
T Consensus 25 g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~ 104 (334)
T 2p9w_A 25 QVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHS 104 (334)
T ss_dssp TEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEE
T ss_pred CEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEE
Confidence 3444444467777777776331 111 1 113689999 68888877543 2678999
Q ss_pred EeCC---CCeEEEEEe--cC-----------CCCcEEEEEccCCCCEEEEEeCC-CeEEEEECCCCcEEEEec--C----
Q 004203 134 IDCQ---TGSCLKVLH--GH-----------RRTPWVVRFHPLNPTIIASGSLD-HEVRLWNASTAECIGSRD--F---- 190 (768)
Q Consensus 134 WDl~---tg~~l~~l~--gH-----------~g~V~sVafSP~dg~lLaSgS~D-gtVrLWDl~sg~~i~~l~--h---- 190 (768)
||+. +++.+.... .. ......++..+ +|+..++++.- +.|...|.... ....+. .
T Consensus 105 ~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~ 182 (334)
T 2p9w_A 105 FNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGG 182 (334)
T ss_dssp EESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSS
T ss_pred EcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcc
Confidence 9999 887765543 11 12377899999 89999988888 88777776544 222221 1
Q ss_pred -CCCeEEEEEcCCCCEEEEEEC-CeEEEEEcCCCccccCCeEee--c---CCCCeEEE-EEccCCCeEEEEEe
Q 004203 191 -YRPIASIAFHASGELLAVASG-HKLYIWRYNMREETSSPRIVL--R---TRRSLRAV-HFHPHAAPLLLTAE 255 (768)
Q Consensus 191 -~~~V~svafSPDG~~LatgSd-d~I~IWDl~t~~~~~~~~~l~--~---h~~~V~sV-aFSPDG~~LlaS~s 255 (768)
....+.++++|+|+.|++... ++|..+|+.+... .+..+. + .-.....+ .---+|+.++++..
T Consensus 183 ~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~--~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~ 253 (334)
T 2p9w_A 183 QRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYA--WPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR 253 (334)
T ss_dssp SCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSC--CCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE
T ss_pred cccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcc--eeecccccCCcccccCcccccccccCCEEEEEEcC
Confidence 123679999999998887764 4599999884322 012222 2 12234443 33347776566654
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.12 E-value=0.054 Score=63.89 Aligned_cols=163 Identities=9% Similarity=-0.005 Sum_probs=99.3
Q ss_pred CCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCEEEEEe-CCCeEEEEeCCC----CeEEEEEecCCCCcEEEEEccC
Q 004203 89 EAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQT----GSCLKVLHGHRRTPWVVRFHPL 160 (768)
Q Consensus 89 ~DgsIrlWd~~t~~---L~gH~~~VtslafSPDG~~LaSgS-~DgtVrVWDl~t----g~~l~~l~gH~g~V~sVafSP~ 160 (768)
....|+..++.... +......+.+++|++++..|+.+. ..+.|+++++.+ ......+.........|++.+.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 34567777776542 233345677899999777766554 467899999875 2222222222233556788764
Q ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEeecCCC
Q 004203 161 NPTIIASGSLDHEVRLWNASTAECIGSRDF-YRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRR 236 (768)
Q Consensus 161 dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h-~~~V~svafSPDG~~LatgSd---d~I~IWDl~t~~~~~~~~~l~~h~~ 236 (768)
+++++++-...+.|.++|+........+.. ......++++|++.+|+.+.. ++|++++++..... ..+...-.
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~---~l~~~~l~ 540 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY---SLVTENIQ 540 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC---EESCSSCS
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee---EEEeCCCC
Confidence 566666656678899999876544433332 234577899997776665542 45888877644321 11222335
Q ss_pred CeEEEEEccCCCeEEEEE
Q 004203 237 SLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 237 ~V~sVaFSPDG~~LlaS~ 254 (768)
..+.|+|+|++..|.++-
T Consensus 541 ~PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVD 558 (699)
T ss_dssp SCCCEEECTTTCCEEEEE
T ss_pred CccEEEEeccCCEEEEEe
Confidence 678899999877676654
No 285
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.10 E-value=0.76 Score=48.57 Aligned_cols=166 Identities=9% Similarity=-0.055 Sum_probs=100.4
Q ss_pred CEEEEEeCCCeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEE
Q 004203 82 RGLASWVEAESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (768)
Q Consensus 82 ~~LvSgs~DgsIrlWd~~t~~L-----~gH~~~VtslafSPDG~~L-aSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sV 155 (768)
...++-...+.|..++...... ...-....++++.+.+..| ++-...+.|.+++++.......+.........+
T Consensus 48 ~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~gi 127 (318)
T 3sov_A 48 LIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAI 127 (318)
T ss_dssp EEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred EEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEE
Confidence 3334444566777777765421 1122356689998755544 455567899999987654444444445668899
Q ss_pred EEccCCCCEEEEEe--CCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCeE
Q 004203 156 RFHPLNPTIIASGS--LDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSSPRI 230 (768)
Q Consensus 156 afSP~dg~lLaSgS--~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSd--d~I~IWDl~t~~~~~~~~~ 230 (768)
++.| .+..|+.+. ..+.|...++.......... .-..-+.++|++++..|+.+.. +.|..+|++..... ..
T Consensus 128 avdp-~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~---~~ 203 (318)
T 3sov_A 128 ALDP-SSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ---AV 203 (318)
T ss_dssp EEEG-GGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EE
T ss_pred EEeC-CCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceE---EE
Confidence 9999 444444444 25788888886433222222 2235678999999888888773 45999998754321 12
Q ss_pred eecCCCCeEEEEEccCCCeEEEE
Q 004203 231 VLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 231 l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
..........+++.. ..++.+
T Consensus 204 ~~~~~~~P~glav~~--~~lywt 224 (318)
T 3sov_A 204 VKGSLPHPFALTLFE--DILYWT 224 (318)
T ss_dssp ECSCCSCEEEEEEET--TEEEEE
T ss_pred ecCCCCCceEEEEeC--CEEEEE
Confidence 222345567777753 334444
No 286
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.08 E-value=0.023 Score=65.60 Aligned_cols=82 Identities=17% Similarity=0.255 Sum_probs=57.9
Q ss_pred CCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeE--EEEEcCCCC-
Q 004203 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIA--SIAFHASGE- 204 (768)
Q Consensus 128 DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~--svafSPDG~- 204 (768)
++.|+.||+.+|+.+..+.... .+..-.... .+.+++.++.|+.|+.||.++|+.+..+.....+. -+.|..+|+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~t-agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEe-CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 5889999999999887765432 222212222 46678889999999999999999998876554443 366777887
Q ss_pred EEEEEEC
Q 004203 205 LLAVASG 211 (768)
Q Consensus 205 ~LatgSd 211 (768)
++++.+.
T Consensus 543 Yv~~~~G 549 (582)
T 1flg_A 543 YLGVTVG 549 (582)
T ss_dssp EEEEEEC
T ss_pred EEEEEcc
Confidence 4444443
No 287
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.03 E-value=0.017 Score=66.39 Aligned_cols=81 Identities=9% Similarity=0.074 Sum_probs=56.3
Q ss_pred CCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCe--EEEEEcCCCCE
Q 004203 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPI--ASIAFHASGEL 205 (768)
Q Consensus 128 DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V--~svafSPDG~~ 205 (768)
++.|..||+.+|+.+..+... ..+....+.. .+.+++.++.|+.|+.||.++|+.+..+.....+ ..+.+..+|+.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~ 520 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ 520 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCeEEEEECCCCCEEEEecCC-CCccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEE
Confidence 578999999999988877633 2233323333 4567777999999999999999999887644332 22445677875
Q ss_pred EEEEE
Q 004203 206 LAVAS 210 (768)
Q Consensus 206 LatgS 210 (768)
++...
T Consensus 521 yv~~~ 525 (571)
T 2ad6_A 521 YIGSM 525 (571)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55444
No 288
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.03 E-value=0.31 Score=51.35 Aligned_cols=138 Identities=9% Similarity=0.046 Sum_probs=84.4
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC--CCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCC
Q 004203 105 PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDC--QTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA 182 (768)
Q Consensus 105 gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl--~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg 182 (768)
++...+..+++.+++++++.+......+-+|- .+.+.+. ......+..+.+.+ ++.++ .++.+|.+++++...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~-~g~~~-~~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTP-DGRLW-MIVNGGKIAFSDPDNS 235 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECT-TSCEE-EEETTTEEEEEETTEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECC-CCCEE-EEeCCceEEEecCCCC
Confidence 45668999999999888876654444444442 2333332 23456788899988 66655 4556788887753334
Q ss_pred cEEEEec-----CCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEee---cCCCCeEEEEEccCCCeE
Q 004203 183 ECIGSRD-----FYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVL---RTRRSLRAVHFHPHAAPL 250 (768)
Q Consensus 183 ~~i~~l~-----h~~~V~svafSPDG~~LatgSdd~I~IWDl~t~~~~~~~~~l~---~h~~~V~sVaFSPDG~~L 250 (768)
+....+. ....+..++|.+++.+++++.++.| ++..+.++.-. .+. .....+..+.|.++++.+
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~---~~~~~~~~~~~~~~v~~~~~~~~~ 307 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQ---QDVDVKKVPSNFYKILFFSPDQGF 307 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCE---ECGGGTTSSSCCCEEEEEETTEEE
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccE---EcCccCCCCCCeEEEEEECCCceE
Confidence 4333222 2235889999999888888777767 34444443211 222 123567888888666533
No 289
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.02 E-value=0.26 Score=53.68 Aligned_cols=173 Identities=10% Similarity=0.093 Sum_probs=108.1
Q ss_pred CEEEEEeCCCeEEEEeCCCCCCCCCC-CCeEEEEECCC----CCE--EE--EEeC--CCeEEEEeC--CCCeEEEEEec-
Q 004203 82 RGLASWVEAESLHHLRPKYCPLSPPP-RSTIAAAFSPD----GKT--LA--STHG--DHTVKIIDC--QTGSCLKVLHG- 147 (768)
Q Consensus 82 ~~LvSgs~DgsIrlWd~~t~~L~gH~-~~VtslafSPD----G~~--La--SgS~--DgtVrVWDl--~tg~~l~~l~g- 147 (768)
..++.-.+++-+.++|+.-..+.... +.++.+..-|+ |+. |+ +.-. +.+|.+|++ .+++ +..+..
T Consensus 41 s~ii~t~k~~gL~Vydl~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~ 119 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLDGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDP 119 (355)
T ss_dssp CEEEEEETTTEEEEEETTSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCT
T ss_pred cEEEEEcCCCCEEEEcCCCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecccc
Confidence 44555556677888888444332222 56777777662 322 33 3333 578999966 4444 444421
Q ss_pred -----CC-CCcEEEEE--ccCCCC-EEEEEeCCCeEEEEECC-------CCcEEEEecCCCCeEEEEEcCCCCEEEEEEC
Q 004203 148 -----HR-RTPWVVRF--HPLNPT-IIASGSLDHEVRLWNAS-------TAECIGSRDFYRPIASIAFHASGELLAVASG 211 (768)
Q Consensus 148 -----H~-g~V~sVaf--SP~dg~-lLaSgS~DgtVrLWDl~-------sg~~i~~l~h~~~V~svafSPDG~~LatgSd 211 (768)
.. ..++.+++ +|.++. +++....++.+..|++. +.+.++++...+.+..+..++....|+++-.
T Consensus 120 ~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eE 199 (355)
T 3amr_A 120 DHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEE 199 (355)
T ss_dssp TSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEET
T ss_pred ccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecc
Confidence 11 45677887 674454 57777888999999883 3356777888889999999999999999986
Q ss_pred Ce-EEEEEcCCCcccc-CCeEeec--C-CCCeEEEEE--ccCCC-eEEEEEe
Q 004203 212 HK-LYIWRYNMREETS-SPRIVLR--T-RRSLRAVHF--HPHAA-PLLLTAE 255 (768)
Q Consensus 212 d~-I~IWDl~t~~~~~-~~~~l~~--h-~~~V~sVaF--SPDG~-~LlaS~s 255 (768)
+. |..+|.+...... ....... + ...+..|++ .++|+ +|++++.
T Consensus 200 d~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 200 DEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ 251 (355)
T ss_dssp TTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG
T ss_pred cceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC
Confidence 54 7777755322100 0111222 2 247888888 56777 6777764
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.98 E-value=0.57 Score=56.19 Aligned_cols=166 Identities=9% Similarity=-0.037 Sum_probs=101.5
Q ss_pred EEEEEeCCCeEEEEeCCCC-------C-CCCCCCCeEEEEECCCCCEEEEE-eCCCeEEEEeCCCCeEEEEEecCCCCcE
Q 004203 83 GLASWVEAESLHHLRPKYC-------P-LSPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (768)
Q Consensus 83 ~LvSgs~DgsIrlWd~~t~-------~-L~gH~~~VtslafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~g~V~ 153 (768)
..++-...+.|+.+++... . +........+|++.+.++.|+.+ ...+.|.+.+++.......+.......+
T Consensus 438 lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~ 517 (791)
T 3m0c_C 438 IYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPR 517 (791)
T ss_dssp EEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEE
T ss_pred eEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcc
Confidence 3334445567777776532 1 12234556789999877655544 5578999999986655555554556688
Q ss_pred EEEEccCCCCEEEEEeCC-CeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCe
Q 004203 154 VVRFHPLNPTIIASGSLD-HEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSSPR 229 (768)
Q Consensus 154 sVafSP~dg~lLaSgS~D-gtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSd--d~I~IWDl~t~~~~~~~~ 229 (768)
.|++.|..+.++++-..+ +.|...++........+. .-.....|++++.+..|+.+.. ++|..+|++......
T Consensus 518 gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~--- 594 (791)
T 3m0c_C 518 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT--- 594 (791)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---
T ss_pred eEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEE---
Confidence 999999445555443333 689999987544433333 2246789999998888888763 449999986554321
Q ss_pred Eeec--CCCCeEEEEEccCCCeEEEE
Q 004203 230 IVLR--TRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 230 ~l~~--h~~~V~sVaFSPDG~~LlaS 253 (768)
.+.. .-....+|++. +.+|..+
T Consensus 595 v~~~~~~l~~P~glav~--~~~lYwt 618 (791)
T 3m0c_C 595 ILEDEKRLAHPFSLAVF--EDKVFWT 618 (791)
T ss_dssp EEECTTTTSSEEEEEEE--TTEEEEE
T ss_pred EecCCCccCCCCEEEEe--CCEEEEE
Confidence 2222 12344566663 3345544
No 291
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.90 E-value=0.45 Score=51.66 Aligned_cols=161 Identities=12% Similarity=0.074 Sum_probs=97.8
Q ss_pred CCCeEEEEeCCCC--C-----CCC-----CCCCeEEEEECC--CCC--EEEEEeC--CCeEEEEeCCCC--e--EEEEEe
Q 004203 89 EAESLHHLRPKYC--P-----LSP-----PPRSTIAAAFSP--DGK--TLASTHG--DHTVKIIDCQTG--S--CLKVLH 146 (768)
Q Consensus 89 ~DgsIrlWd~~t~--~-----L~g-----H~~~VtslafSP--DG~--~LaSgS~--DgtVrVWDl~tg--~--~l~~l~ 146 (768)
.+|.|.++|.... + +.+ ..-....+.+.+ ||. ++++-.. +.+|.+|+++.+ . .+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6888888887632 1 112 234677888765 454 3444343 567888876553 2 223444
Q ss_pred cCC-CCcEEEEEccCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEE
Q 004203 147 GHR-RTPWVVRFHPLNPTIIASGSL-----------------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAV 208 (768)
Q Consensus 147 gH~-g~V~sVafSP~dg~lLaSgS~-----------------DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~Lat 208 (768)
+.. ...+.+.+.+ ++.+.++... .+.|+-+|. ++.......-..-+.++|+||++.|++
T Consensus 161 g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEE
Confidence 322 3578899999 8887776541 244555554 333333333345688999999999988
Q ss_pred EE--CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEcc-CCCeEEEE
Q 004203 209 AS--GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHP-HAAPLLLT 253 (768)
Q Consensus 209 gS--dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSP-DG~~LlaS 253 (768)
+. .++|+.||++........ .........-.+++.+ +|+..++.
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~-~~~~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPL-RVLSFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEE-EEEECSSEEEEEEECTTTCCEEEEE
T ss_pred EeCCCCeEEEEEECCCCcEecC-EEEeCCCCCceEEEeCCCCcEEEEe
Confidence 87 355999999743222211 1223356678899999 59865544
No 292
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.89 E-value=0.74 Score=53.45 Aligned_cols=163 Identities=9% Similarity=-0.036 Sum_probs=103.1
Q ss_pred eCCCeEEEEeCCCC-----CCCCCCCCeEEEEECCCCCEEEEEeC-CCeEEEEeCCCCeE-EEEEecCCCCcEEEEEccC
Q 004203 88 VEAESLHHLRPKYC-----PLSPPPRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTGSC-LKVLHGHRRTPWVVRFHPL 160 (768)
Q Consensus 88 s~DgsIrlWd~~t~-----~L~gH~~~VtslafSPDG~~LaSgS~-DgtVrVWDl~tg~~-l~~l~gH~g~V~sVafSP~ 160 (768)
.....|+..++... .+...-+...+++|++.+..|+.+.. .+.|+.++++.... ...+...-.....+++.+.
T Consensus 15 ~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 15 ANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 94 (619)
T ss_dssp ECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETT
T ss_pred eccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEec
Confidence 34566777776543 12334556889999997776665544 68899999876542 3344433356889999985
Q ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEeecCCC
Q 004203 161 NPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRR 236 (768)
Q Consensus 161 dg~lLaSgS~DgtVrLWDl~sg~~i~~l-~h~~~V~svafSPDG~~LatgSd---d~I~IWDl~t~~~~~~~~~l~~h~~ 236 (768)
+++++++-...+.|.+.|+......... ..-.....++++|.+.+|+.+.. .+|...+++...... .....-.
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~---l~~~~~~ 171 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI---IINSEIY 171 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---EECSSCS
T ss_pred CCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEE---EEeCCCC
Confidence 5666666667789999999765433333 23345678999998777776663 347777776543211 2223456
Q ss_pred CeEEEEEccCCCeEEEE
Q 004203 237 SLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 237 ~V~sVaFSPDG~~LlaS 253 (768)
..+.|+++++++.|..+
T Consensus 172 ~P~Glald~~~~~LY~a 188 (619)
T 3s94_A 172 WPNGLTLDYEEQKLYWA 188 (619)
T ss_dssp SEEEEEEETTTTEEEEE
T ss_pred CCcEEEEEccCCEEEEE
Confidence 78999999987767665
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.76 E-value=0.28 Score=55.67 Aligned_cols=139 Identities=14% Similarity=0.099 Sum_probs=89.1
Q ss_pred CEEEEEeCCCeEEEEeCCCCCCC-------CCCCCeEEEEE-------CCCCCEEEEEeCCC-------eEEEEeCCC-C
Q 004203 82 RGLASWVEAESLHHLRPKYCPLS-------PPPRSTIAAAF-------SPDGKTLASTHGDH-------TVKIIDCQT-G 139 (768)
Q Consensus 82 ~~LvSgs~DgsIrlWd~~t~~L~-------gH~~~Vtslaf-------SPDG~~LaSgS~Dg-------tVrVWDl~t-g 139 (768)
...++......|++.|++.+.+. ........++| +++|++|+++...+ .|.+++... +
T Consensus 153 ~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G 232 (496)
T 3kya_A 153 HLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADG 232 (496)
T ss_dssp EEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTS
T ss_pred EEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCC
Confidence 33444444567888998876321 12235899999 99999777776653 377776443 2
Q ss_pred eEE-----EEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECC-------CCcE--------------EEEecCCCC
Q 004203 140 SCL-----KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS-------TAEC--------------IGSRDFYRP 193 (768)
Q Consensus 140 ~~l-----~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~-------sg~~--------------i~~l~h~~~ 193 (768)
+.. ..+... .....++++|+++.++++-..++.|+.+|+. +++. +........
T Consensus 233 ~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~ 311 (496)
T 3kya_A 233 TFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSW 311 (496)
T ss_dssp CCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSC
T ss_pred ceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCC
Confidence 221 222221 2345678999667777777788899999997 5543 112223344
Q ss_pred eEEEEEcCCCCEEEEEE--CCeEEEEEcCC
Q 004203 194 IASIAFHASGELLAVAS--GHKLYIWRYNM 221 (768)
Q Consensus 194 V~svafSPDG~~LatgS--dd~I~IWDl~t 221 (768)
...++|+|+|++|+++. .+.|+.+|++.
T Consensus 312 p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 312 EFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 57899999999777765 34598877654
No 294
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.71 E-value=0.25 Score=53.00 Aligned_cols=141 Identities=17% Similarity=0.212 Sum_probs=79.9
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEE--Ee---cCCCCcEEEEEccC---CCCEEEEEeCC-----CeEE
Q 004203 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV--LH---GHRRTPWVVRFHPL---NPTIIASGSLD-----HEVR 175 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~--l~---gH~g~V~sVafSP~---dg~lLaSgS~D-----gtVr 175 (768)
.-..++|.|||++++ +..++.|++++ +++.... +. ........|+|+|+ ++.++++-..+ ..|.
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 467999999998554 55669999999 4543221 11 12345788999993 25555554432 5788
Q ss_pred EEECCCCcE-----E-EEecC----CCCeEEEEEcCCCCEEEEEEC--------------CeEEEEEcCCCccc------
Q 004203 176 LWNASTAEC-----I-GSRDF----YRPIASIAFHASGELLAVASG--------------HKLYIWRYNMREET------ 225 (768)
Q Consensus 176 LWDl~sg~~-----i-~~l~h----~~~V~svafSPDG~~LatgSd--------------d~I~IWDl~t~~~~------ 225 (768)
.|+...++. + ..+.. ......++|.|||.+.++.++ ++|..+|.+..-..
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~ 188 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG 188 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC
Confidence 888775421 1 11221 123468999999975555332 24666665431000
Q ss_pred ---cCCeEeecCCCCeEEEEEcc-CCCeEEE
Q 004203 226 ---SSPRIVLRTRRSLRAVHFHP-HAAPLLL 252 (768)
Q Consensus 226 ---~~~~~l~~h~~~V~sVaFSP-DG~~Lla 252 (768)
.........-.....++|+| +|..+++
T Consensus 189 ~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~ 219 (352)
T 2ism_A 189 RRGARPEVYSLGHRNPQGLAWHPKTGELFSS 219 (352)
T ss_dssp CTTSCTTEEEECCSEECCCEECTTTCCEEEE
T ss_pred CCCCCccEEEEcCCCcccEEEECCCCCEEEE
Confidence 00111222224567899999 6664444
No 295
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.68 E-value=0.12 Score=57.35 Aligned_cols=144 Identities=12% Similarity=0.041 Sum_probs=84.7
Q ss_pred CCeEEEEECCC--CCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCC---C-eEEEEECCC
Q 004203 108 RSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLD---H-EVRLWNAST 181 (768)
Q Consensus 108 ~~VtslafSPD--G~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~D---g-tVrLWDl~s 181 (768)
....+++|+|+ +..|+.+...+.|+++|.++++..... ........++|++ +++++++-... . .+...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEECCC
Confidence 34678999995 455666655589999999888765544 3445688999999 77755544321 1 233333322
Q ss_pred CcE-EEEecCCCCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 182 AEC-IGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 182 g~~-i~~l~h~~~V~svafSPDG~~LatgS--dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
+.. ...+........++++|++..|+++. .+.|+.+|..++.... ..........-..++|+|+|++|.++-
T Consensus 217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~-~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTE-EEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEE-EEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEE-EEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 211 11222234456788999444444444 3459999987654311 011112223345799999999666554
No 296
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.59 E-value=0.087 Score=61.64 Aligned_cols=144 Identities=13% Similarity=0.054 Sum_probs=90.9
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC----C-CCCCeEEEEECC--CCCEEEEEeC------CCeEEEEeCCCCeEEEEEec
Q 004203 81 RRGLASWVEAESLHHLRPKYCPLS----P-PPRSTIAAAFSP--DGKTLASTHG------DHTVKIIDCQTGSCLKVLHG 147 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~L~----g-H~~~VtslafSP--DG~~LaSgS~------DgtVrVWDl~tg~~l~~l~g 147 (768)
+..|+.+..|+.|..+|.+++++. . .......+..+| .+..++.+.. ++.|+.+|.++|+.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 456777788899999998877421 1 000000111112 2335555543 58999999999999887753
Q ss_pred CCC-------------------------------CcEEEEEccCCCCEEEEEeCCC-------------------eEEEE
Q 004203 148 HRR-------------------------------TPWVVRFHPLNPTIIASGSLDH-------------------EVRLW 177 (768)
Q Consensus 148 H~g-------------------------------~V~sVafSP~dg~lLaSgS~Dg-------------------tVrLW 177 (768)
..+ ....+++.| +..+++.++.++ .|..+
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 110 112367888 667787777665 49999
Q ss_pred ECCCCcEEEEecCC----------CCeEEEEEcCCCC---EEEEEEC-CeEEEEEcCCCccc
Q 004203 178 NASTAECIGSRDFY----------RPIASIAFHASGE---LLAVASG-HKLYIWRYNMREET 225 (768)
Q Consensus 178 Dl~sg~~i~~l~h~----------~~V~svafSPDG~---~LatgSd-d~I~IWDl~t~~~~ 225 (768)
|.++|+.+..+... .+.....+..+|+ .|++++. +.++++|..+++..
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 99999998776421 2233333444675 5666664 45999999998764
No 297
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.51 E-value=0.25 Score=53.16 Aligned_cols=140 Identities=14% Similarity=0.137 Sum_probs=79.5
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe-EEEEEe---cCCCCcEEEEEccC---CCCEEEEEeC---C----CeE
Q 004203 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGS-CLKVLH---GHRRTPWVVRFHPL---NPTIIASGSL---D----HEV 174 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~-~l~~l~---gH~g~V~sVafSP~---dg~lLaSgS~---D----gtV 174 (768)
...+++|.|||++++ +..++.|+++| .+++ .+..+. ........|+|+|+ ++.++++-+. + ..|
T Consensus 30 ~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 467899999998554 55669999998 4565 222211 12245788999993 3555555442 3 567
Q ss_pred EEEECCCC--c---E--E-EEec--CCCCeEEEEEcCCCCEEEEEEC--------------CeEEEEEcCCCccc-----
Q 004203 175 RLWNASTA--E---C--I-GSRD--FYRPIASIAFHASGELLAVASG--------------HKLYIWRYNMREET----- 225 (768)
Q Consensus 175 rLWDl~sg--~---~--i-~~l~--h~~~V~svafSPDG~~LatgSd--------------d~I~IWDl~t~~~~----- 225 (768)
..|+...+ . . + ..+. .......++|.|||.+.++.++ ++|..+|.+..-..
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 77887654 1 1 1 1122 1123467999999986655432 24555555432100
Q ss_pred cCCeEeecCCCCeEEEEEcc-CCCeEE
Q 004203 226 SSPRIVLRTRRSLRAVHFHP-HAAPLL 251 (768)
Q Consensus 226 ~~~~~l~~h~~~V~sVaFSP-DG~~Ll 251 (768)
.......++ .....++|+| +|+.++
T Consensus 188 ~~~i~a~G~-rnp~Gla~d~~~g~l~v 213 (354)
T 3a9g_A 188 NSPIWSYGH-RNPQGIDWHRASGVMVA 213 (354)
T ss_dssp TCCEEEECC-SCCCEEEECTTTCCEEE
T ss_pred CCcEEEEcc-CCcceEEEeCCCCCEEE
Confidence 001122233 4567899999 666443
No 298
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.46 E-value=0.35 Score=51.06 Aligned_cols=181 Identities=9% Similarity=0.076 Sum_probs=103.7
Q ss_pred CCCCCEEEEEe--CCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCC--------------CeEEEEEC
Q 004203 116 SPDGKTLASTH--GDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLD--------------HEVRLWNA 179 (768)
Q Consensus 116 SPDG~~LaSgS--~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~D--------------gtVrLWDl 179 (768)
+.+|.+|+... .++.|+..+.+... ...+... . +--+++ ++++|+..... ..|+..++
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~--~--~~~i~~-~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND--T--AMYINA-DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE--E--EEEEEE-CSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC--c--eeeEEE-cCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 34677777664 36778888876544 3333322 1 234578 77777776543 36888888
Q ss_pred CCCcEEEEecCCCCeEEEEEcCCCCEEEEEE---CCe--EEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEEE
Q 004203 180 STAECIGSRDFYRPIASIAFHASGELLAVAS---GHK--LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 180 ~sg~~i~~l~h~~~V~svafSPDG~~LatgS---dd~--I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
..++....... . ...|++++++|+... ++. |+..+++.... ..+..+.. ..|+++|+.|..+.
T Consensus 96 dg~~~~~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~----~~lt~~~~----~~~~~~g~~iy~t~ 163 (302)
T 3s25_A 96 NGHGSTVLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK----KKIKNHYL----FTCNTSDRYFYYNN 163 (302)
T ss_dssp TSCCCEEEECS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC----EEEESSCC----CCSEEETTEEEEEC
T ss_pred CCCcceEeecC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe----EEEeCCCc----eEeeEECCEEEEEe
Confidence 87764443322 1 237888999999876 333 77777765432 23444432 45788999888764
Q ss_pred eeCCcCCCCcceeEeecCCcccCCCCeEEEecCCCCCCCCcccccCCCCCCceEEEEecCCCEEEEEecCCCCCcceEEe
Q 004203 255 EVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQ 334 (768)
Q Consensus 255 svwdl~sg~~~~~L~t~~G~~~~p~~~V~l~d~~s~d~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d~~~Gs~~~~~ 334 (768)
. +..........|. ....+... +...| +.|+++.|++.... .+..+...
T Consensus 164 ~------g~~~Iy~~~l~g~----------------~~~~l~~~------~~~~~-~~P~g~~iy~t~~~--~~~~I~~~ 212 (302)
T 3s25_A 164 P------KNGQLYRYDTASQ----------------SEALFYDC------NCYKP-VVLDDTNVYYMDVN--RDNAIVHV 212 (302)
T ss_dssp T------TTCCEEEEETTTT----------------EEEEEECS------CEEEE-EEEETTEEEEEEGG--GTTEEEEE
T ss_pred C------CCceEEEEECCCC----------------CEEEEeCC------Cccce-eeecCCEEEEEEcC--CCcEEEEE
Confidence 3 1111111111221 11111111 11233 56999999986322 23678888
Q ss_pred ccCCCceeeee
Q 004203 335 SLRSSSSVRLL 345 (768)
Q Consensus 335 ~~~ss~~~rl~ 345 (768)
.++++..++|+
T Consensus 213 ~ldG~~~~~Lt 223 (302)
T 3s25_A 213 NINNPNPVVLT 223 (302)
T ss_dssp CSSSCCCEECS
T ss_pred ECCCCCeEEEe
Confidence 99988877665
No 299
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.44 E-value=0.49 Score=52.87 Aligned_cols=102 Identities=14% Similarity=0.186 Sum_probs=61.8
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEE--EEec------CCCCcEEEEEccC---CCCEEEEEeC-------
Q 004203 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK--VLHG------HRRTPWVVRFHPL---NPTIIASGSL------- 170 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~--~l~g------H~g~V~sVafSP~---dg~lLaSgS~------- 170 (768)
...+++|.|||+++++-...+.|++++..+++... .+.. ..+....|+|+|+ ++.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 45799999999977765554579999876665432 2221 1344668999994 4555554432
Q ss_pred -----CCeEEEEECCCC--cE-----EE-Eec--CCCCeEEEEEcCCCCEEEEEE
Q 004203 171 -----DHEVRLWNASTA--EC-----IG-SRD--FYRPIASIAFHASGELLAVAS 210 (768)
Q Consensus 171 -----DgtVrLWDl~sg--~~-----i~-~l~--h~~~V~svafSPDG~~LatgS 210 (768)
...|.-|++..+ +. +. .+. .......++|.|||++.++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666665432 11 11 122 123568899999998666554
No 300
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.43 E-value=0.44 Score=51.62 Aligned_cols=143 Identities=15% Similarity=0.129 Sum_probs=83.6
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEE--E----ecCCCCcEEEEEccC---CCCEEEEEe--CCCeEEEE
Q 004203 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV--L----HGHRRTPWVVRFHPL---NPTIIASGS--LDHEVRLW 177 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~--l----~gH~g~V~sVafSP~---dg~lLaSgS--~DgtVrLW 177 (768)
.-..++|.|||+++++--..|.|++++.++++.... + ....+....|+++|+ ++.+.++-+ .++.|.-|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 467999999999877766689999998776654322 1 122345788999993 355544322 34456666
Q ss_pred ECCCC----------cEEE-Eec--CCCCeEEEEEcCCCCEEEEEEC--------------CeEEEEEcCCCccc-----
Q 004203 178 NASTA----------ECIG-SRD--FYRPIASIAFHASGELLAVASG--------------HKLYIWRYNMREET----- 225 (768)
Q Consensus 178 Dl~sg----------~~i~-~l~--h~~~V~svafSPDG~~LatgSd--------------d~I~IWDl~t~~~~----- 225 (768)
.+..+ +.+. .+. ....-..++|.|||.+.++.++ ++|..++.+..-..
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~ 192 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFP 192 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSST
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCC
Confidence 65541 1111 121 1223457999999986666432 34555565432100
Q ss_pred cCCeEeecCCCCeEEEEEccCCCeEEE
Q 004203 226 SSPRIVLRTRRSLRAVHFHPHAAPLLL 252 (768)
Q Consensus 226 ~~~~~l~~h~~~V~sVaFSPDG~~Lla 252 (768)
.......++ .....++|+|+|..+++
T Consensus 193 ~~~i~a~G~-RNp~Gla~dp~G~L~~~ 218 (347)
T 3das_A 193 GSPVYSYGH-RNVQGLAWDDKQRLFAS 218 (347)
T ss_dssp TCCEEEBCC-SBCCEEEECTTCCEEEE
T ss_pred CCeEEeeCC-CCcceEEECCCCCEEEE
Confidence 011122333 45678999999874433
No 301
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.30 E-value=0.22 Score=53.52 Aligned_cols=142 Identities=17% Similarity=0.042 Sum_probs=78.8
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEe-------cCCCCcEEEEEccC---CCCEEEEEeC-------C
Q 004203 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH-------GHRRTPWVVRFHPL---NPTIIASGSL-------D 171 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~-------gH~g~V~sVafSP~---dg~lLaSgS~-------D 171 (768)
....++|.|||++|+.+...+.|++++.+ ++....+. ...+....++|+|+ ++.+.++-+. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 35789999999945556678999999853 43221111 11234678999994 3555555332 2
Q ss_pred CeEEEEECCCC--c--EEEE-e---c----CCCCeEEEEEcCCCCEEEEEEC--------------CeEEEEEcCCCccc
Q 004203 172 HEVRLWNASTA--E--CIGS-R---D----FYRPIASIAFHASGELLAVASG--------------HKLYIWRYNMREET 225 (768)
Q Consensus 172 gtVrLWDl~sg--~--~i~~-l---~----h~~~V~svafSPDG~~LatgSd--------------d~I~IWDl~t~~~~ 225 (768)
..|..|++..+ + ..+. + . ....-..++|.|||.+.++.++ ++|..+|.+..-..
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35666776543 1 1111 1 1 1112357999999965444433 25777776543100
Q ss_pred c---------CCeEeecCCCCeEEEEEcc-CCCeEE
Q 004203 226 S---------SPRIVLRTRRSLRAVHFHP-HAAPLL 251 (768)
Q Consensus 226 ~---------~~~~l~~h~~~V~sVaFSP-DG~~Ll 251 (768)
. ........-.....++|+| +|+.++
T Consensus 178 ~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~ 213 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWL 213 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEE
T ss_pred CCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEE
Confidence 0 0112222235678999999 665333
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.29 E-value=0.52 Score=51.23 Aligned_cols=129 Identities=14% Similarity=0.139 Sum_probs=90.6
Q ss_pred CCeEEEEeC--CCCCCC---C------CC-CCeEEEEE--CCC-CC-EEEEEeCCCeEEEEeCC-------CCeEEEEEe
Q 004203 90 AESLHHLRP--KYCPLS---P------PP-RSTIAAAF--SPD-GK-TLASTHGDHTVKIIDCQ-------TGSCLKVLH 146 (768)
Q Consensus 90 DgsIrlWd~--~t~~L~---g------H~-~~Vtslaf--SPD-G~-~LaSgS~DgtVrVWDl~-------tg~~l~~l~ 146 (768)
+++|.++++ .+.++. . .. ..+..+++ +|+ ++ ++++...++.+..|++. +++.++.|.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 578999955 343321 1 11 56777888 774 54 67888889999999882 335667776
Q ss_pred cCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECC-----CCcEEEEecC---CCCeEEEEE--cCCCC-EEEEEE--CCe
Q 004203 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS-----TAECIGSRDF---YRPIASIAF--HASGE-LLAVAS--GHK 213 (768)
Q Consensus 147 gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~-----sg~~i~~l~h---~~~V~svaf--SPDG~-~LatgS--dd~ 213 (768)
- .+.+..+...+ ....|+.+-.|.-|..+|.+ +++.+..+.. ...+..|+. .++++ +|++++ ++.
T Consensus 178 l-gsq~EgcvvDd-~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 178 M-NSQTEGMAADD-EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp C-SSCEEEEEEET-TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred C-CCCcceEEEcC-CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 4 45688888888 77888888998888888865 3455655532 247888888 56777 787777 445
Q ss_pred EEEEEcC
Q 004203 214 LYIWRYN 220 (768)
Q Consensus 214 I~IWDl~ 220 (768)
..+||..
T Consensus 256 ~~Vydr~ 262 (355)
T 3amr_A 256 YAIYDRQ 262 (355)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 9999986
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.05 E-value=3.5 Score=47.82 Aligned_cols=164 Identities=7% Similarity=-0.051 Sum_probs=106.5
Q ss_pred EeCCCeEEEEeCCCCCC-----C-CCCCCeEEEEECCCCCEEEEE-eCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEcc
Q 004203 87 WVEAESLHHLRPKYCPL-----S-PPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHP 159 (768)
Q Consensus 87 gs~DgsIrlWd~~t~~L-----~-gH~~~VtslafSPDG~~LaSg-S~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP 159 (768)
.+..+.|+..++..... . ..-..+.+++|++.+..|+.+ ...+.|+.++++.......+...-..+..+++.+
T Consensus 322 ~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~ 401 (619)
T 3s94_A 322 LARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDW 401 (619)
T ss_dssp EEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEET
T ss_pred EEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEec
Confidence 34456777777765421 1 123467899999965555554 4578999999886555455544445677899987
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEEC---CeEEEEEcCCCccccCCeEeecCC
Q 004203 160 LNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTR 235 (768)
Q Consensus 160 ~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSd---d~I~IWDl~t~~~~~~~~~l~~h~ 235 (768)
.+++++.+-+..+.|.+.++.......... .-.....++++|....|+.+.. .+|...+++..... ......-
T Consensus 402 ~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~---~l~~~~l 478 (619)
T 3s94_A 402 VARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRV---VLVNTSL 478 (619)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---EEECSSC
T ss_pred ccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccE---EEEeCCC
Confidence 466666666667899999987654322222 2346789999998666666652 34777777544321 1223335
Q ss_pred CCeEEEEEccCCCeEEEE
Q 004203 236 RSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 236 ~~V~sVaFSPDG~~LlaS 253 (768)
...+.|++++++..|..+
T Consensus 479 ~~P~GlalD~~~~~LY~a 496 (619)
T 3s94_A 479 GWPNGLALDYDEGKIYWG 496 (619)
T ss_dssp SCEEEEEEETTTTEEEEE
T ss_pred CCCeeeEEcccCCEEEEE
Confidence 678999999977766655
No 304
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.97 E-value=0.91 Score=47.76 Aligned_cols=143 Identities=14% Similarity=0.121 Sum_probs=84.0
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEE-EecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEEC--CCC
Q 004203 106 PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV-LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNA--STA 182 (768)
Q Consensus 106 H~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~-l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl--~sg 182 (768)
+...+..+.+.++++.++.+ .++.|+.- .+.|+.-.. ..++...+..+.+.+ ++.+++.+...+..+-+|- .+.
T Consensus 120 ~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~-~~~~~~~g~~G~~~~S~d~gG~tW 196 (327)
T 2xbg_A 120 LPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSP-SGEYVAVSSRGSFYSTWEPGQTAW 196 (327)
T ss_dssp CSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECT-TSCEEEEETTSSEEEEECTTCSSC
T ss_pred CCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEEcC-CCcEEEEECCCcEEEEeCCCCCce
Confidence 44568888888777766655 45655332 233443322 234556788999999 7777776654444444442 233
Q ss_pred cEEEEecCCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccccCCeEee--cCCCCeEEEEEccCCCeEEEE
Q 004203 183 ECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVL--RTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 183 ~~i~~l~h~~~V~svafSPDG~~LatgSdd~I~IWDl~t~~~~~~~~~l~--~h~~~V~sVaFSPDG~~LlaS 253 (768)
+.+ .......+..+++.++++.++++.++.+++.+.+.++.-. ..... .....+..+.|.+++..++++
T Consensus 197 ~~~-~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~-~~~~~~~~~~~~~~~v~~~~~~~~~~~g 267 (327)
T 2xbg_A 197 EPH-NRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWG-ELLSPLRRNSVGFLDLAYRTPNEVWLAG 267 (327)
T ss_dssp EEE-ECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEEC-CCBCTTSSCCSCEEEEEESSSSCEEEEE
T ss_pred eEC-CCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeE-eccCCcccCCcceEEEEecCCCEEEEEe
Confidence 333 2234567889999999988777666667776432222111 00111 123458899999888755543
No 305
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.72 E-value=0.33 Score=56.31 Aligned_cols=81 Identities=12% Similarity=0.114 Sum_probs=54.6
Q ss_pred CCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC--eEEEEEcCCCC-
Q 004203 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRP--IASIAFHASGE- 204 (768)
Q Consensus 128 DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~--V~svafSPDG~- 204 (768)
++.|..||+.+|+.+...+.. ..+..-.... .+.+++.++.|+.|+.||.++|+.+..+..... ..-+.|..+|+
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~t-agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMER-FAVWGGTMAT-AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cCeEEEEECCCCCEEeEecCC-CCccCcceEe-cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEE
Confidence 478999999999988776522 2222111222 467777799999999999999999888754332 23355667777
Q ss_pred EEEEEE
Q 004203 205 LLAVAS 210 (768)
Q Consensus 205 ~LatgS 210 (768)
++++.+
T Consensus 530 yv~~~~ 535 (599)
T 1w6s_A 530 YVAIYY 535 (599)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 444444
No 306
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.60 E-value=3.4 Score=48.00 Aligned_cols=164 Identities=6% Similarity=-0.077 Sum_probs=103.3
Q ss_pred EEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEEEE-EeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEc
Q 004203 84 LASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLAS-THGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFH 158 (768)
Q Consensus 84 LvSgs~DgsIrlWd~~t~~----L~gH~~~VtslafSPDG~~LaS-gS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafS 158 (768)
.++-..++.|..+++.... +..-.....++++.+.++.|+. -...+.|.+.+++.......+...-...+.+++.
T Consensus 52 ywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavd 131 (628)
T 4a0p_A 52 YWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALD 131 (628)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEE
T ss_pred EEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEc
Confidence 3344456677777765431 1112245678999886665554 4557899999987655444443445568899999
Q ss_pred cCCCCEEEEE-eCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEEEEEC--CeEEEEEcCCCccccCCeEeecCC
Q 004203 159 PLNPTIIASG-SLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSSPRIVLRTR 235 (768)
Q Consensus 159 P~dg~lLaSg-S~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~LatgSd--d~I~IWDl~t~~~~~~~~~l~~h~ 235 (768)
|..+.++.+- +..+.|...++...........-.....++++++++.|+.+.. +.|..+|++.... ..+....
T Consensus 132 p~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~----~v~~~~l 207 (628)
T 4a0p_A 132 PAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR----EVIADDL 207 (628)
T ss_dssp TTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEEECC
T ss_pred cCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce----EEeeccC
Confidence 9445444443 1256788888876554444444456789999999998888874 4599999976543 1233334
Q ss_pred CCeEEEEEccCCCeEEEE
Q 004203 236 RSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 236 ~~V~sVaFSPDG~~LlaS 253 (768)
.....+++.. ..+..+
T Consensus 208 ~~P~glav~~--~~ly~t 223 (628)
T 4a0p_A 208 PHPFGLTQYQ--DYIYWT 223 (628)
T ss_dssp SCEEEEEEET--TEEEEE
T ss_pred CCceEEEEEC--CEEEEe
Confidence 4566788765 345444
No 307
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.22 E-value=0.2 Score=58.05 Aligned_cols=112 Identities=19% Similarity=0.179 Sum_probs=77.0
Q ss_pred EEEECC-CCCEEEEEeCCC-----------eEEEEeCCCCeE--EEEEec-CCCCcEEEEEccCCCCEEEEEeC-CCeEE
Q 004203 112 AAAFSP-DGKTLASTHGDH-----------TVKIIDCQTGSC--LKVLHG-HRRTPWVVRFHPLNPTIIASGSL-DHEVR 175 (768)
Q Consensus 112 slafSP-DG~~LaSgS~Dg-----------tVrVWDl~tg~~--l~~l~g-H~g~V~sVafSP~dg~lLaSgS~-DgtVr 175 (768)
.+++.+ +|+.++.|+.+. .+.+||..+++- +..+.. +......+++.. ++++++.|+. +..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT-TSCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC-CCCEEEeCCCCCCceE
Confidence 566777 888888887643 689999988753 233322 223334567777 8899999884 45899
Q ss_pred EEECCCCcEEEE--ecCCCCeEEEEEcCCCCEEEEEE-C------CeEEEEEcCCCcc
Q 004203 176 LWNASTAECIGS--RDFYRPIASIAFHASGELLAVAS-G------HKLYIWRYNMREE 224 (768)
Q Consensus 176 LWDl~sg~~i~~--l~h~~~V~svafSPDG~~LatgS-d------d~I~IWDl~t~~~ 224 (768)
+||..+.+.... +.......+++..++|+++++|+ . +.+.+||..+.+.
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 999988765443 22333445667778999998887 2 2399999887653
No 308
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.50 E-value=5.1 Score=44.74 Aligned_cols=130 Identities=15% Similarity=0.120 Sum_probs=84.4
Q ss_pred ecCCCEEEEEeCCCeEEEEeCCCC----CC--CC--CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe---------
Q 004203 78 RDARRGLASWVEAESLHHLRPKYC----PL--SP--PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS--------- 140 (768)
Q Consensus 78 ~d~g~~LvSgs~DgsIrlWd~~t~----~L--~g--H~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~--------- 140 (768)
..++..++... ++.||.-++... .+ .. .-..|..+..||+|++||..+ +..|.|..+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 34555555543 366776666522 11 11 123578899999999999875 4589998886321
Q ss_pred ---EEEEEec------CCCCcEEEEEccCC--CCEEEEEeCCCeEEEEECCCC--cEEEEec----------CCCCeEEE
Q 004203 141 ---CLKVLHG------HRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTA--ECIGSRD----------FYRPIASI 197 (768)
Q Consensus 141 ---~l~~l~g------H~g~V~sVafSP~d--g~lLaSgS~DgtVrLWDl~sg--~~i~~l~----------h~~~V~sv 197 (768)
..+.+.- ....|..+.|||.. +..|++-..|++|++||+... ++. .+. ....|.++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEE
Confidence 1223321 24679999999943 348889999999999999862 222 221 22578889
Q ss_pred EEcCCCCEEEEEE
Q 004203 198 AFHASGELLAVAS 210 (768)
Q Consensus 198 afSPDG~~LatgS 210 (768)
+|..++-.|+..+
T Consensus 186 ~Fg~~~lTLYvl~ 198 (452)
T 3pbp_A 186 EFSKDGLTLYCLN 198 (452)
T ss_dssp EECTTSSCEEEEE
T ss_pred EEcCCCcEEEEEe
Confidence 9998877666655
No 309
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.31 E-value=0.63 Score=47.65 Aligned_cols=138 Identities=14% Similarity=0.111 Sum_probs=83.9
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeE------EEEEe--cCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECC
Q 004203 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC------LKVLH--GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS 180 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~------l~~l~--gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~ 180 (768)
.+.+++|+|||.+.++ .++.++..+..+.+. -..+- +-.. ...+.|.| ++.+.++ .||.|+-++-.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~-~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDP-NGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECT-TSCEEEE--ETTEEEEESCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECC-CCCEEEe--CCCEEEEeCCC
Confidence 5679999999986655 778888888755211 12221 2222 56789999 8888777 56999888764
Q ss_pred CCcEEEE------ec--CCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCcccc---CCeEee-cCCCCeEEEEEccCCC
Q 004203 181 TAECIGS------RD--FYRPIASIAFHASGELLAVASGHKLYIWRYNMREETS---SPRIVL-RTRRSLRAVHFHPHAA 248 (768)
Q Consensus 181 sg~~i~~------l~--h~~~V~svafSPDG~~LatgSdd~I~IWDl~t~~~~~---~~~~l~-~h~~~V~sVaFSPDG~ 248 (768)
+...... +. --..+..+.|+|+|.+-++. ++.++.+...+..... ....+. ..-..-+-+.|.++|.
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 4222111 11 11467999999999988888 8876554333222100 011122 2223455677999998
Q ss_pred eEEEE
Q 004203 249 PLLLT 253 (768)
Q Consensus 249 ~LlaS 253 (768)
.+.+.
T Consensus 195 l~~v~ 199 (236)
T 1tl2_A 195 LFGVQ 199 (236)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55554
No 310
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.48 E-value=4.4 Score=43.80 Aligned_cols=141 Identities=9% Similarity=0.101 Sum_probs=82.1
Q ss_pred CeEEEEECCCCCEEEEEe------------CCCeEEEEeCCC--CeE-EEEEec-----CCCCcEEEEEccC-CCC-EEE
Q 004203 109 STIAAAFSPDGKTLASTH------------GDHTVKIIDCQT--GSC-LKVLHG-----HRRTPWVVRFHPL-NPT-IIA 166 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS------------~DgtVrVWDl~t--g~~-l~~l~g-----H~g~V~sVafSP~-dg~-lLa 166 (768)
...+++..|+|..+++++ .+|.|.++|.++ ++. ...+.+ .......+.+.++ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 455667777775555542 689999999874 332 122333 2235667777662 333 343
Q ss_pred EE-eC--CCeEEEEECCCC--cE--EEEecC--CCCeEEEEEcCCCCEEEEEEC------------------CeEEEEEc
Q 004203 167 SG-SL--DHEVRLWNASTA--EC--IGSRDF--YRPIASIAFHASGELLAVASG------------------HKLYIWRY 219 (768)
Q Consensus 167 Sg-S~--DgtVrLWDl~sg--~~--i~~l~h--~~~V~svafSPDG~~LatgSd------------------d~I~IWDl 219 (768)
.+ .. +.+|-+|++..+ .. +..+.+ -...+.+++.++|.+.++... +.|+.+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 33 22 457777776543 22 222332 236789999999987776531 12444443
Q ss_pred CCCccccCCeEeecCCCCeEEEEEccCCCeEEEEEe
Q 004203 220 NMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 220 ~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
++ ...+...-...+.++|+||++++.++-.
T Consensus 211 --~~----~~~~~~~l~~pNGia~spDg~~lYvadt 240 (355)
T 3sre_A 211 --ND----VRVVAEGFDFANGINISPDGKYVYIAEL 240 (355)
T ss_dssp --TC----CEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred --Ce----EEEeecCCcccCcceECCCCCEEEEEeC
Confidence 32 1234444567899999999998776653
No 311
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=92.15 E-value=0.16 Score=60.00 Aligned_cols=135 Identities=8% Similarity=-0.050 Sum_probs=79.2
Q ss_pred eCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCEEEEEeC-C-CeEEEEeCCCCeEEEEEecCCCCcEEEEEccCC
Q 004203 88 VEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTHG-D-HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLN 161 (768)
Q Consensus 88 s~DgsIrlWd~~t~~----L~gH~~~VtslafSPDG~~LaSgS~-D-gtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~d 161 (768)
...+.|.+.+..... +.........++++|++.+|+.+.. . +.|.+++++.......+...-...+.|+|+|++
T Consensus 472 ~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~ 551 (699)
T 1n7d_A 472 SVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLS 551 (699)
T ss_dssp TTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTT
T ss_pred ccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccC
Confidence 345667777776442 1122244678899997666665543 2 788888876443323322233456779999955
Q ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecC---CCCeEEEEEcCCCCEEEEEE--CCeEEEEEcCCCcc
Q 004203 162 PTIIASGSLDHEVRLWNASTAECIGSRDF---YRPIASIAFHASGELLAVAS--GHKLYIWRYNMREE 224 (768)
Q Consensus 162 g~lLaSgS~DgtVrLWDl~sg~~i~~l~h---~~~V~svafSPDG~~LatgS--dd~I~IWDl~t~~~ 224 (768)
+.++++-...+.|..+|+........+.. ......+++.. ..|+... .+.|..+|..+++.
T Consensus 552 ~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~--~~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 552 GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp CCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET--TEEEEECSTTTCEEEEETTTEEE
T ss_pred CEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC--CEEEEEeCCCCeEEEEEccCCCc
Confidence 66666666678999999975433322221 12233455543 3454444 34488888766654
No 312
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.92 E-value=20 Score=41.78 Aligned_cols=168 Identities=10% Similarity=-0.001 Sum_probs=104.2
Q ss_pred EEEecCCCEEEEEeCCCeEEEEeCCCCCCCC----CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEe----
Q 004203 75 EAGRDARRGLASWVEAESLHHLRPKYCPLSP----PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH---- 146 (768)
Q Consensus 75 ~a~~d~g~~LvSgs~DgsIrlWd~~t~~L~g----H~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~---- 146 (768)
....+....|+.+..+| +..+|..+.++.. ....|.++... +| .|..++.+ -|.+||.++++.. .+.
T Consensus 67 ~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~-~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~ 141 (758)
T 3ott_A 67 CGVIIDNTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQ-GD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRN 141 (758)
T ss_dssp EEEEETTTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEE-TT-EEEEEETT-EEEEEETTTCCEE-EECHHHH
T ss_pred EEEEcCCCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEec-CC-cEEEEcCC-cceeEeCCCCeEE-EeccCCC
Confidence 33446677888887665 6788887764432 23357777553 55 45556665 6889998876643 331
Q ss_pred -cCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cC-----CCCeEEEEEcCCCCEEEEEECCeEEEEEc
Q 004203 147 -GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DF-----YRPIASIAFHASGELLAVASGHKLYIWRY 219 (768)
Q Consensus 147 -gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l-~h-----~~~V~svafSPDG~~LatgSdd~I~IWDl 219 (768)
-....|.++.... ++.+.+ +..+ -|..+|..+++..... .. ...|.++....++..|-.++++++..+|.
T Consensus 142 ~l~~~~i~~i~~d~-~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~ 218 (758)
T 3ott_A 142 GLPNNTIYSIIRTK-DNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYFP 218 (758)
T ss_dssp CCSCSCEEEEEECT-TCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEET
T ss_pred CcCCCeEEEEEEcC-CCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECCCCeEEcC
Confidence 1134577777766 666555 4444 5888898876543321 11 22478888888777655566667999998
Q ss_pred CCCccccCCeEeecCCCCeEEEEEccCCCeEEEE
Q 004203 220 NMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 220 ~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
.+.+... ...+ ....|.++....+|...+.+
T Consensus 219 ~~~~~~~-~~~l--~~~~i~~i~~d~~g~lWigT 249 (758)
T 3ott_A 219 STGQIKQ-TEAF--HNNSIKSLALDGNGDLLAGT 249 (758)
T ss_dssp TTTEEEE-EEEE--EEEEEEEEEECTTCCEEEEE
T ss_pred CCCeEEe-ccCC--CCCeEEEEEEcCCCCEEEEe
Confidence 7654322 1111 23458889888888866655
No 313
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.08 E-value=10 Score=38.45 Aligned_cols=128 Identities=16% Similarity=0.124 Sum_probs=70.2
Q ss_pred CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC------CeEEEEeCCCCeEEEE--EecCCCCcEEEE
Q 004203 91 ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD------HTVKIIDCQTGSCLKV--LHGHRRTPWVVR 156 (768)
Q Consensus 91 gsIrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS~D------gtVrVWDl~tg~~l~~--l~gH~g~V~sVa 156 (768)
..+..+|..+.+ +......-..+.+ ++++++.|+.+ ..+.+||..+.+-... +........ +.
T Consensus 70 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~ 146 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHG-MV 146 (306)
T ss_dssp CEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCE-EE
T ss_pred ceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeE-EE
Confidence 567888887652 2222222223333 57777777754 4699999988753322 111111112 22
Q ss_pred EccCCCCEEEEEeC---------CCeEEEEECCCCcEEEEec--CCCCeEEEEEcCCCCEEEEEEC------CeEEEEEc
Q 004203 157 FHPLNPTIIASGSL---------DHEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVASG------HKLYIWRY 219 (768)
Q Consensus 157 fSP~dg~lLaSgS~---------DgtVrLWDl~sg~~i~~l~--h~~~V~svafSPDG~~LatgSd------d~I~IWDl 219 (768)
. - ++++++.|+. -..+.+||+.+.+-...-. ....-.+++.. ++++++.|+. +.+.+||+
T Consensus 147 ~-~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~ 223 (306)
T 3ii7_A 147 E-A-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDI 223 (306)
T ss_dssp E-E-TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEET
T ss_pred E-E-CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeC
Confidence 2 2 5677777653 3458999999876444322 22212222222 5666666652 23899999
Q ss_pred CCCcc
Q 004203 220 NMREE 224 (768)
Q Consensus 220 ~t~~~ 224 (768)
.+.+-
T Consensus 224 ~~~~W 228 (306)
T 3ii7_A 224 KLNEW 228 (306)
T ss_dssp TTTEE
T ss_pred CCCcE
Confidence 88754
No 314
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.07 E-value=1.4 Score=45.06 Aligned_cols=129 Identities=15% Similarity=0.118 Sum_probs=77.8
Q ss_pred CCEEEEEeCCCeEEEEeCCCCe------EEEEEecC--CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecC
Q 004203 119 GKTLASTHGDHTVKIIDCQTGS------CLKVLHGH--RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF 190 (768)
Q Consensus 119 G~~LaSgS~DgtVrVWDl~tg~------~l~~l~gH--~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h 190 (768)
...|+...+| +|+.=...++. ....+ +. =..+..++|+| ++.+.+. .++.++-.+..+.+....+..
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~i-G~~gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s 78 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLI-GKGGWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGR 78 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEE-ESSSCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHH
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhcccc-CccccccceeEEECC-CccEEEE--eCCeEEEECCCCCCccccccc
Confidence 4456666677 66655444433 12222 22 24678999999 8886666 677777777655322211111
Q ss_pred CC--------CeEEEEEcCCCCEEEEEECCeEEEEEcCCCcccc---CCeEeecC-CCCeEEEEEccCCCeEEEE
Q 004203 191 YR--------PIASIAFHASGELLAVASGHKLYIWRYNMREETS---SPRIVLRT-RRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 191 ~~--------~V~svafSPDG~~LatgSdd~I~IWDl~t~~~~~---~~~~l~~h-~~~V~sVaFSPDG~~LlaS 253 (768)
.. ....+.|+|+|.+.++ +++.|+.++-.+..... .-.++..+ =..+..|.|.|+|...+++
T Consensus 79 ~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 79 AKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp CEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred ccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 11 2578999999998887 88889888754332211 01112111 2468999999999966555
No 315
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=90.99 E-value=10 Score=42.36 Aligned_cols=130 Identities=14% Similarity=0.168 Sum_probs=79.1
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEecC----CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCc----------
Q 004203 118 DGKTLASTHGDHTVKIIDCQTGSCLKVLHGH----RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAE---------- 183 (768)
Q Consensus 118 DG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH----~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~---------- 183 (768)
+|..++.+- +..||.-++..+..-+.++-. -..|..+..+| +|++||..+ +.+|.|-.+..+.
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCccccccc
Confidence 455554443 356777676643333344332 23688899999 999988875 4579998887331
Q ss_pred --EEEEe--c-----CCCCeEEEEEcCCC---CEEEEEE-CCeEEEEEcCCCccccCCeEee---------cCCCCeEEE
Q 004203 184 --CIGSR--D-----FYRPIASIAFHASG---ELLAVAS-GHKLYIWRYNMREETSSPRIVL---------RTRRSLRAV 241 (768)
Q Consensus 184 --~i~~l--~-----h~~~V~svafSPDG---~~LatgS-dd~I~IWDl~t~~~~~~~~~l~---------~h~~~V~sV 241 (768)
..+.+ + ...+|..+.|||-+ ..|++-. ++.|++||+..... .|..+. .....|.++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~--~P~~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQE--KPIVLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTS--CCEEESCCCSEEESCSSCCCEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCC--CCcchhccccccCCCcccceEEEE
Confidence 11122 1 24689999999954 4566666 55699999987332 222111 112567788
Q ss_pred EEccCCCeEEE
Q 004203 242 HFHPHAAPLLL 252 (768)
Q Consensus 242 aFSPDG~~Lla 252 (768)
+|.+++-.|.+
T Consensus 186 ~Fg~~~lTLYv 196 (452)
T 3pbp_A 186 EFSKDGLTLYC 196 (452)
T ss_dssp EECTTSSCEEE
T ss_pred EEcCCCcEEEE
Confidence 88886654443
No 316
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=90.98 E-value=2.5 Score=45.03 Aligned_cols=102 Identities=13% Similarity=0.174 Sum_probs=61.7
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEE--Eec----CCCCeEEEEEcCC---CCEEEEEEC-------C
Q 004203 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIG--SRD----FYRPIASIAFHAS---GELLAVASG-------H 212 (768)
Q Consensus 149 ~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~--~l~----h~~~V~svafSPD---G~~LatgSd-------d 212 (768)
-...+.++|.| ++++++ +..++.|++++ +++... .+. .......++|+|+ +..|+++.. +
T Consensus 30 l~~P~~ia~~p-dG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 30 LEVPWALAFLP-DGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CSCEEEEEECT-TSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCceEEEEcC-CCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 34577899999 887555 46679999998 444321 111 2346789999998 666655542 4
Q ss_pred eEEEEEcCCCccccCCeE---ee---cCCCCeEEEEEccCCCeEEEEE
Q 004203 213 KLYIWRYNMREETSSPRI---VL---RTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 213 ~I~IWDl~t~~~~~~~~~---l~---~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
.|..|++........... +. ........++|.|||..+++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 588888874321110011 11 1112346899999997555443
No 317
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.76 E-value=2.6 Score=45.55 Aligned_cols=112 Identities=13% Similarity=0.180 Sum_probs=68.3
Q ss_pred EEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE--e-----cCCCCeEEEEEcCC---CCEEEEE-E-
Q 004203 143 KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--R-----DFYRPIASIAFHAS---GELLAVA-S- 210 (768)
Q Consensus 143 ~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~--l-----~h~~~V~svafSPD---G~~Latg-S- 210 (768)
..+...-...+.|+|.| ++.++++-...|.|++++..+++.... + ........++|+|| +..|++. +
T Consensus 25 ~~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 25 RTVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp EEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred EEeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 34444445688999999 888777655589999998766654322 2 12456789999996 4455443 2
Q ss_pred --CCeEEEEEcCCCc----cccCCeEee-----cCCCCeEEEEEccCCCeEEEEEe
Q 004203 211 --GHKLYIWRYNMRE----ETSSPRIVL-----RTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 211 --dd~I~IWDl~t~~----~~~~~~~l~-----~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
+++|..|.+.... .......+. .....-..|.|.|||..+++.+.
T Consensus 104 ~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 104 ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 3447778776521 111111111 11224567999999986666554
No 318
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.38 E-value=6 Score=42.10 Aligned_cols=142 Identities=14% Similarity=0.087 Sum_probs=75.9
Q ss_pred EEEEECCCCCEEEEEeC-------------CCeEEEEeCCCC-------------eEEEEEecCCCCcEEEEEccCCCCE
Q 004203 111 IAAAFSPDGKTLASTHG-------------DHTVKIIDCQTG-------------SCLKVLHGHRRTPWVVRFHPLNPTI 164 (768)
Q Consensus 111 tslafSPDG~~LaSgS~-------------DgtVrVWDl~tg-------------~~l~~l~gH~g~V~sVafSP~dg~l 164 (768)
..++|.|||.+.++.+. .+.|..+|.+.. .....-.++.. .+.++|+|.++++
T Consensus 133 ~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rn-p~gl~~d~~~g~l 211 (353)
T 2g8s_A 133 GRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRN-PQGMAMNPWSNAL 211 (353)
T ss_dssp CCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSE-EEEEEEETTTTEE
T ss_pred ccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcC-ccceEEECCCCCE
Confidence 57999999965554433 257888887542 11111234543 6779999955555
Q ss_pred EEEEe-CCCeEEEEECCCCc-------------------------------EEEEecCCCCeEEEEEcC-------CCCE
Q 004203 165 IASGS-LDHEVRLWNASTAE-------------------------------CIGSRDFYRPIASIAFHA-------SGEL 205 (768)
Q Consensus 165 LaSgS-~DgtVrLWDl~sg~-------------------------------~i~~l~h~~~V~svafSP-------DG~~ 205 (768)
+++-. .++.=.|.-+..+. +...+.+......++|.. +|++
T Consensus 212 ~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l 291 (353)
T 2g8s_A 212 WLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKL 291 (353)
T ss_dssp EEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEE
T ss_pred EEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcE
Confidence 54422 12111222222211 111223334566778864 4555
Q ss_pred EEEEE-CCeEEEEEcCCCccccCCeEeecCCCCeEEEEEccCCCeEEEE
Q 004203 206 LAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 206 LatgS-dd~I~IWDl~t~~~~~~~~~l~~h~~~V~sVaFSPDG~~LlaS 253 (768)
++..- .++|...++..++.......+......+..+++.|||..++++
T Consensus 292 ~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 292 FIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp EEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred EEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 44433 4458888887543222111111234579999999999965544
No 319
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=89.58 E-value=3.5 Score=44.08 Aligned_cols=103 Identities=11% Similarity=0.085 Sum_probs=61.3
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCc-EEEEec----CCCCeEEEEEcCC---CCEEEEEE-C--------
Q 004203 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAE-CIGSRD----FYRPIASIAFHAS---GELLAVAS-G-------- 211 (768)
Q Consensus 149 ~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~-~i~~l~----h~~~V~svafSPD---G~~LatgS-d-------- 211 (768)
-...+.++|.| ++++++ +..++.|+++| .+++ .+..+. .......++|+|+ +..|+++. .
T Consensus 28 l~~P~~ia~~p-dG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLG-GGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEE-TTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcC-CCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 34578899999 777544 56679999997 4554 222111 2346789999998 55555443 2
Q ss_pred CeEEEEEcCCCc--cc--cCCeE-ee-cCCCCeEEEEEccCCCeEEEEE
Q 004203 212 HKLYIWRYNMRE--ET--SSPRI-VL-RTRRSLRAVHFHPHAAPLLLTA 254 (768)
Q Consensus 212 d~I~IWDl~t~~--~~--~~~~~-l~-~h~~~V~sVaFSPDG~~LlaS~ 254 (768)
+.|..|++.... .. ..... +. ........+.|.|||..+++.+
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 458888876541 10 00001 11 1112356799999998555543
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.18 E-value=5 Score=44.59 Aligned_cols=106 Identities=11% Similarity=0.153 Sum_probs=63.9
Q ss_pred CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEE--ec-------CCCCeEEEEEcCC---CCEEEEEEC-----
Q 004203 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--RD-------FYRPIASIAFHAS---GELLAVASG----- 211 (768)
Q Consensus 149 ~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~--l~-------h~~~V~svafSPD---G~~LatgSd----- 211 (768)
-...+.|+|.| +++++++-...+.|++++..+++.... +. .......|+|+|| +..|++...
T Consensus 26 l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 34578999999 888776644445799988766654322 21 1345679999996 555555441
Q ss_pred ---------CeEEEEEcCCCcc-ccCCeEee-----cCCCCeEEEEEccCCCeEEEEEe
Q 004203 212 ---------HKLYIWRYNMREE-TSSPRIVL-----RTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 212 ---------d~I~IWDl~t~~~-~~~~~~l~-----~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
..|..|++..... ......+. ........|.|.|||..+++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 2377777654311 00011111 11245789999999986666554
No 321
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=88.44 E-value=19 Score=36.22 Aligned_cols=128 Identities=13% Similarity=0.056 Sum_probs=69.9
Q ss_pred CeEEEEeCCCCC---C------CCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCeEEE--EEecCCCCcEE
Q 004203 91 ESLHHLRPKYCP---L------SPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLK--VLHGHRRTPWV 154 (768)
Q Consensus 91 gsIrlWd~~t~~---L------~gH~~~VtslafSPDG~~LaSgS~D-----gtVrVWDl~tg~~l~--~l~gH~g~V~s 154 (768)
..+.++|..+.+ . ......-..+.+ +++.++.|+.+ ..+.+||+.+.+-.. .+.........
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 155 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGL 155 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEE
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceE
Confidence 358888877654 2 111112222333 56777776643 468999998875332 22211111222
Q ss_pred EEEccCCCCEEEEEeCC-----CeEEEEECCCCcEEEEec--CCCCeEEEEEcCCCCEEEEEEC------CeEEEEEcCC
Q 004203 155 VRFHPLNPTIIASGSLD-----HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVASG------HKLYIWRYNM 221 (768)
Q Consensus 155 VafSP~dg~lLaSgS~D-----gtVrLWDl~sg~~i~~l~--h~~~V~svafSPDG~~LatgSd------d~I~IWDl~t 221 (768)
+. - ++++++.|+.+ ..+.+||+.+.+-...-. ....-.+++. -++++++.|+. +.+.+||+.+
T Consensus 156 ~~--~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 156 VV--A-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp EE--E-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EE--E-CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCC
Confidence 22 2 57788887754 469999998876544322 1111112222 25666677652 2399999987
Q ss_pred Ccc
Q 004203 222 REE 224 (768)
Q Consensus 222 ~~~ 224 (768)
.+-
T Consensus 232 ~~W 234 (301)
T 2vpj_A 232 DSW 234 (301)
T ss_dssp TEE
T ss_pred CcE
Confidence 754
No 322
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=87.45 E-value=18 Score=39.15 Aligned_cols=119 Identities=14% Similarity=0.158 Sum_probs=86.0
Q ss_pred CCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEE
Q 004203 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLA 207 (768)
Q Consensus 128 DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~La 207 (768)
+..|.|.|+.++.....-.- . ..+.-.+| ..+++|--. ..++.++|+++.+.++.+.....|.--.|-.+ +.|+
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi--~-AdsAIMnP-~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~-~~L~ 121 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPI--S-ADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVA 121 (365)
T ss_dssp EEEEEEEETTSTTSCEEEEC--C-CSEEEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSS-SEEE
T ss_pred CCEEEEEECCCCCCcccccc--c-cceeeeCC-CccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCC-CeEE
Confidence 34788889887654322111 1 22345689 777777654 67899999999999999888889988888754 5677
Q ss_pred EEECCeEEEEEcCCCccccCCeEeec-C----CCCeEEEEEccCCCeEEEEEe
Q 004203 208 VASGHKLYIWRYNMREETSSPRIVLR-T----RRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 208 tgSdd~I~IWDl~t~~~~~~~~~l~~-h----~~~V~sVaFSPDG~~LlaS~s 255 (768)
..++..|+-|++.... .|.++.. | ...|-.-..+++.++++..+-
T Consensus 122 lVT~taVyHWs~~~~s---~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 171 (365)
T 2xzh_A 122 LVTDNAVYHWSMEGES---QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 171 (365)
T ss_dssp EEESSEEEEEESSTTC---CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEE
T ss_pred EEcCCcEEEEcccCCC---CCceeeecchhcccceEEEEEECCCCCEEEEEeE
Confidence 7888899999997633 2444443 2 456788888999999887664
No 323
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=87.06 E-value=14 Score=37.47 Aligned_cols=131 Identities=11% Similarity=0.040 Sum_probs=70.5
Q ss_pred CCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC----CeEEEEeCCCCeEEEEEecCCCCcEEEEEcc
Q 004203 90 AESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD----HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHP 159 (768)
Q Consensus 90 DgsIrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS~D----gtVrVWDl~tg~~l~~l~gH~g~V~sVafSP 159 (768)
...+..+|..+.+ +......-..+.+ +++.++.|+.+ ..+.+||..+.+-...-.-...........-
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 100 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA 100 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE
Confidence 3456777776541 2221222223332 56677777754 6799999988754332211111111111122
Q ss_pred CCCCEEEEEeCC------CeEEEEECCCCcEEEEec--CCCCeEEEEEcCCCCEEEEEE----------CCeEEEEEcCC
Q 004203 160 LNPTIIASGSLD------HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVAS----------GHKLYIWRYNM 221 (768)
Q Consensus 160 ~dg~lLaSgS~D------gtVrLWDl~sg~~i~~l~--h~~~V~svafSPDG~~LatgS----------dd~I~IWDl~t 221 (768)
++++++.|+.+ ..+.+||..+.+-...-. ....-.+++. -++++++.|+ .+.+.+||..+
T Consensus 101 -~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 -EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp -TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred -CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 67788887765 469999999876544321 1211122222 2566666665 22388999988
Q ss_pred Ccc
Q 004203 222 REE 224 (768)
Q Consensus 222 ~~~ 224 (768)
.+-
T Consensus 179 ~~W 181 (306)
T 3ii7_A 179 ETW 181 (306)
T ss_dssp TEE
T ss_pred CeE
Confidence 754
No 324
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=84.42 E-value=66 Score=37.25 Aligned_cols=166 Identities=13% Similarity=0.015 Sum_probs=99.9
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC--------CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecC----
Q 004203 81 RRGLASWVEAESLHHLRPKYCPLS--------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH---- 148 (768)
Q Consensus 81 g~~LvSgs~DgsIrlWd~~t~~L~--------gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH---- 148 (768)
...|+.+..+ -+..++..+.++. -....|.++....+|.+.+ ++.+ -|..||..+++... +...
T Consensus 112 ~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~~~~~~~ 187 (758)
T 3ott_A 112 GDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEG-IPLPVHSS 187 (758)
T ss_dssp TTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEE-ECCCCCTT
T ss_pred CCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEE-ecCCCccc
Confidence 4567767666 5777887655332 1234688998888887665 4444 47888987766432 2211
Q ss_pred --CCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCeEEEEEcCCCCEEEEEECCeEEEEEcCCCccc
Q 004203 149 --RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHKLYIWRYNMREET 225 (768)
Q Consensus 149 --~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~-h~~~V~svafSPDG~~LatgSdd~I~IWDl~t~~~~ 225 (768)
...|.++.... ++..|..|.. +-|..+|..+++...... ....|.++....+|.+.+. +++++.++|..+....
T Consensus 188 ~~~~~i~~i~~d~-~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~Gl~~~~~~~~~~~ 264 (758)
T 3ott_A 188 QSNLFVNSLLEDT-TRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDNGLYVYHNDTTPLQ 264 (758)
T ss_dssp CSSCCEEEEEEET-TTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETTEEEEECCTTSCCE
T ss_pred cccceeEEEEEEC-CCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCCceeEEecCCCcEE
Confidence 12377777766 5554444443 458889988775433211 2335788888888876554 4678999987665321
Q ss_pred cCCeEe----ecCCCCeEEEEEccCCCeEEEE
Q 004203 226 SSPRIV----LRTRRSLRAVHFHPHAAPLLLT 253 (768)
Q Consensus 226 ~~~~~l----~~h~~~V~sVaFSPDG~~LlaS 253 (768)
...... .-....|.++....+|...+.+
T Consensus 265 ~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT 296 (758)
T 3ott_A 265 HIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT 296 (758)
T ss_dssp EECCCTTCTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred EEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe
Confidence 100000 0013468999999888866554
No 325
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=83.63 E-value=23 Score=35.66 Aligned_cols=128 Identities=18% Similarity=0.164 Sum_probs=69.2
Q ss_pred CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCeEEEE--EecCCCCcEEEEE
Q 004203 91 ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLKV--LHGHRRTPWVVRF 157 (768)
Q Consensus 91 gsIrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS~D-----gtVrVWDl~tg~~l~~--l~gH~g~V~sVaf 157 (768)
..+.++|..+.+ +......-.++.+ +++.++.|+.+ ..+.+||+.+.+-... +.........+.+
T Consensus 128 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 205 (301)
T 2vpj_A 128 TSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL 205 (301)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE
Confidence 357888887652 2211122222333 67777777654 4699999988753322 1111111122222
Q ss_pred ccCCCCEEEEEeCC-----CeEEEEECCCCcEEEEec--CCCCeEEEEEcCCCCEEEEEEC------CeEEEEEcCCCcc
Q 004203 158 HPLNPTIIASGSLD-----HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVASG------HKLYIWRYNMREE 224 (768)
Q Consensus 158 SP~dg~lLaSgS~D-----gtVrLWDl~sg~~i~~l~--h~~~V~svafSPDG~~LatgSd------d~I~IWDl~t~~~ 224 (768)
++.+++.|+.+ ..+.+||+.+.+-...-. .......++. -++++++.|+. +.+.+||..+.+-
T Consensus 206 ---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 206 ---NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV-LRGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp ---TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred ---CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE-ECCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 56788887764 469999999876544322 1111112222 26666666652 1278888877653
No 326
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=82.96 E-value=33 Score=34.55 Aligned_cols=128 Identities=18% Similarity=0.167 Sum_probs=69.1
Q ss_pred CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCeEEEE--EecCCCCcEEEEE
Q 004203 91 ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLKV--LHGHRRTPWVVRF 157 (768)
Q Consensus 91 gsIrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS~D-----gtVrVWDl~tg~~l~~--l~gH~g~V~sVaf 157 (768)
..+..+|..+.+ +......-..+.+ +++.++.|+.+ ..+.+||+.+.+-... +....... .+..
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~ 153 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVGV 153 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEEE
T ss_pred cceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEEE
Confidence 357888887652 2222222223333 57777777755 3588999887753322 11111111 2222
Q ss_pred ccCCCCEEEEEeCC-------CeEEEEECCCCcEEEEe--cCCCCeEEEEEcCCCCEEEEEEC------CeEEEEEcCCC
Q 004203 158 HPLNPTIIASGSLD-------HEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASG------HKLYIWRYNMR 222 (768)
Q Consensus 158 SP~dg~lLaSgS~D-------gtVrLWDl~sg~~i~~l--~h~~~V~svafSPDG~~LatgSd------d~I~IWDl~t~ 222 (768)
- ++++++.|+.+ ..+.+||+.+.+-...- .....-.+++. -++++++.|+. +.+.+||..+.
T Consensus 154 -~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 154 -V-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp -E-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred -E-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 2 56777776542 35899999887654432 22211122222 25677777652 23899998876
Q ss_pred cc
Q 004203 223 EE 224 (768)
Q Consensus 223 ~~ 224 (768)
+-
T Consensus 231 ~W 232 (302)
T 2xn4_A 231 AW 232 (302)
T ss_dssp EE
T ss_pred CE
Confidence 54
No 327
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=82.79 E-value=33 Score=34.53 Aligned_cols=127 Identities=17% Similarity=0.141 Sum_probs=68.3
Q ss_pred eEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeC-------CCeEEEEeCCCCeEEEE--EecCCCCcEEEE
Q 004203 92 SLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHG-------DHTVKIIDCQTGSCLKV--LHGHRRTPWVVR 156 (768)
Q Consensus 92 sIrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS~-------DgtVrVWDl~tg~~l~~--l~gH~g~V~sVa 156 (768)
.+..+|..+.+ +.........+.+ +++.++.|+. ...+.+||+.+.+-... +.........+.
T Consensus 125 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 202 (302)
T 2xn4_A 125 SVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV 202 (302)
T ss_dssp EEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred eEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE
Confidence 47788877652 2222222222332 5666666654 24589999988753322 111111122222
Q ss_pred EccCCCCEEEEEeCC-----CeEEEEECCCCcEEEEec--CCCCeEEEEEcCCCCEEEEEECC------eEEEEEcCCCc
Q 004203 157 FHPLNPTIIASGSLD-----HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVASGH------KLYIWRYNMRE 223 (768)
Q Consensus 157 fSP~dg~lLaSgS~D-----gtVrLWDl~sg~~i~~l~--h~~~V~svafSPDG~~LatgSdd------~I~IWDl~t~~ 223 (768)
+ ++.+++.|+.+ ..+.+||+.+.+-...-. ....-..++. -++++++.|+.+ .+.+||..+.+
T Consensus 203 ~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 203 L---NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp E---TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred E---CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 2 57788887764 369999998876544322 1111112222 266777776521 28999988765
Q ss_pred c
Q 004203 224 E 224 (768)
Q Consensus 224 ~ 224 (768)
-
T Consensus 279 W 279 (302)
T 2xn4_A 279 W 279 (302)
T ss_dssp E
T ss_pred E
Confidence 4
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=82.27 E-value=25 Score=35.79 Aligned_cols=128 Identities=15% Similarity=0.120 Sum_probs=69.5
Q ss_pred CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCeEEEE--EecCCCCcEEEEE
Q 004203 91 ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLKV--LHGHRRTPWVVRF 157 (768)
Q Consensus 91 gsIrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS~D-----gtVrVWDl~tg~~l~~--l~gH~g~V~sVaf 157 (768)
..+..+|..+.+ +......-..+.+ ++++++.|+.+ ..+.+||..+.+-... +.........+.+
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 167 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL 167 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE
Confidence 357888887652 2222222233333 56777776643 4689999987653222 1111111222222
Q ss_pred ccCCCCEEEEEeCC-----CeEEEEECCCCcEEEEe--cCCCCeEEEEEcCCCCEEEEEEC------CeEEEEEcCCCcc
Q 004203 158 HPLNPTIIASGSLD-----HEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASG------HKLYIWRYNMREE 224 (768)
Q Consensus 158 SP~dg~lLaSgS~D-----gtVrLWDl~sg~~i~~l--~h~~~V~svafSPDG~~LatgSd------d~I~IWDl~t~~~ 224 (768)
++.+++.|+.+ ..+.+||+.+.+-...- .......+++.. ++++++.|+. +.+.+||+.+.+-
T Consensus 168 ---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 168 ---NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp ---TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred ---CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 56777777654 46999999887544332 111111222222 6677777652 2399999987754
No 329
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.07 E-value=39 Score=37.59 Aligned_cols=102 Identities=21% Similarity=0.192 Sum_probs=59.1
Q ss_pred eEEEEECCCCC-EEEEEeCCCeEEEEeCCCCe---EEEEEe-----c----CCCCcEEEEEccC---CCCEEEEEeC--C
Q 004203 110 TIAAAFSPDGK-TLASTHGDHTVKIIDCQTGS---CLKVLH-----G----HRRTPWVVRFHPL---NPTIIASGSL--D 171 (768)
Q Consensus 110 VtslafSPDG~-~LaSgS~DgtVrVWDl~tg~---~l~~l~-----g----H~g~V~sVafSP~---dg~lLaSgS~--D 171 (768)
-..|+|.|||+ .|+++...|.|++++.+... .+..+. + ..+....|+|+|+ ++.+.++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 57899999996 56667788999999754321 222221 1 1345778999993 2455444332 1
Q ss_pred ----------CeEEEEECCCC----------cEEEEec---CCCCeEEEEEcCCCCEEEEEEC
Q 004203 172 ----------HEVRLWNASTA----------ECIGSRD---FYRPIASIAFHASGELLAVASG 211 (768)
Q Consensus 172 ----------gtVrLWDl~sg----------~~i~~l~---h~~~V~svafSPDG~~LatgSd 211 (768)
..|.-|.+..+ +.+..+. ....-..|+|.|||++.++.++
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 13444555421 2222221 2234678999999986666553
No 330
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=81.80 E-value=29 Score=35.31 Aligned_cols=130 Identities=11% Similarity=0.020 Sum_probs=69.3
Q ss_pred CeEEEEeCCCCC-----CCCCCCCeEEEEECCCCCEEEEEeC-----------CCeEEEEeCCCCeEEEE--EecCCCCc
Q 004203 91 ESLHHLRPKYCP-----LSPPPRSTIAAAFSPDGKTLASTHG-----------DHTVKIIDCQTGSCLKV--LHGHRRTP 152 (768)
Q Consensus 91 gsIrlWd~~t~~-----L~gH~~~VtslafSPDG~~LaSgS~-----------DgtVrVWDl~tg~~l~~--l~gH~g~V 152 (768)
..+..+|..+.+ +..............+++.++.|+. ...+.+||..+.+-... +.......
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 92 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLF 92 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESC
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhce
Confidence 456777776652 2222222333333457788888873 12388899988753221 11111111
Q ss_pred EEEEEccCCCCEEEEEeCC--------CeEEEEECCCCcEEEEec--CCCCeEEEEEcCCCCEEEEEEC-------CeEE
Q 004203 153 WVVRFHPLNPTIIASGSLD--------HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVASG-------HKLY 215 (768)
Q Consensus 153 ~sVafSP~dg~lLaSgS~D--------gtVrLWDl~sg~~i~~l~--h~~~V~svafSPDG~~LatgSd-------d~I~ 215 (768)
..+.+ ++.+++.|+.+ ..+.+||..+.+-...-. ....-.+++. -++++++.|+. +.+.
T Consensus 93 ~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 168 (315)
T 4asc_A 93 GLGEA---LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMC 168 (315)
T ss_dssp EEEEE---TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEE
T ss_pred eEEEE---CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEE
Confidence 11222 56777777642 369999998875433321 2211122222 45666666653 2399
Q ss_pred EEEcCCCcc
Q 004203 216 IWRYNMREE 224 (768)
Q Consensus 216 IWDl~t~~~ 224 (768)
+||..+.+-
T Consensus 169 ~yd~~~~~W 177 (315)
T 4asc_A 169 VYDPKKFEW 177 (315)
T ss_dssp EEETTTTEE
T ss_pred EEeCCCCeE
Confidence 999887754
No 331
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=81.43 E-value=25 Score=39.48 Aligned_cols=119 Identities=14% Similarity=0.163 Sum_probs=84.8
Q ss_pred CCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEE
Q 004203 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLA 207 (768)
Q Consensus 128 DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~La 207 (768)
+..|.|.|+.++..+..-.- ...+.-.+| ..+++|-=. ..++.|+|+++.+.++.+.....|.--.|-.+ +.|+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP-~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~-~~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPI---SADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEEC---CCSEEEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET-TEEE
T ss_pred CCeEEEEECCCCCcceeccc---ccceeeeCC-CCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC-CeEE
Confidence 34788889887654322111 122456788 667666654 67999999999999999887888888888754 4677
Q ss_pred EEECCeEEEEEcCCCccccCCeEeec-C----CCCeEEEEEccCCCeEEEEEe
Q 004203 208 VASGHKLYIWRYNMREETSSPRIVLR-T----RRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 208 tgSdd~I~IWDl~t~~~~~~~~~l~~-h----~~~V~sVaFSPDG~~LlaS~s 255 (768)
..++..|+-|++.... .|.++.. | ...|-.-..+++.++++..+-
T Consensus 121 lVT~taVyHWsi~~~s---~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 170 (494)
T 1bpo_A 121 LVTDNAVYHWSMEGES---QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (494)
T ss_dssp EECSSEEEEEESSSSC---CCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEE
T ss_pred EEcCCeeEEecccCCC---CchhheecchhcccceEEEEEECCCCCeEEEEee
Confidence 7788889999997633 2444443 2 456888888999999887664
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=81.16 E-value=40 Score=34.30 Aligned_cols=103 Identities=9% Similarity=-0.010 Sum_probs=57.5
Q ss_pred CCCEEEEEeCC--------CeEEEEeCCCCeEEEE--EecCCCCcEEEEEccCCCCEEEEEeC-C-----CeEEEEECCC
Q 004203 118 DGKTLASTHGD--------HTVKIIDCQTGSCLKV--LHGHRRTPWVVRFHPLNPTIIASGSL-D-----HEVRLWNAST 181 (768)
Q Consensus 118 DG~~LaSgS~D--------gtVrVWDl~tg~~l~~--l~gH~g~V~sVafSP~dg~lLaSgS~-D-----gtVrLWDl~s 181 (768)
+++.++.|+.+ ..+.+||..+.+-... +....... +++. - ++++++.|+. + ..+.+||..+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLS-H-MDLVYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-E-TTEEEEECCBCTTSCBCCCEEEEETTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEE-E-CCEEEEEeCCCCCCcccceEEEEeCCC
Confidence 56666666632 4699999988753221 11111112 2222 2 5678888776 2 3699999988
Q ss_pred CcEEEEec--CCCCeEEEEEcCCCCEEEEEE-CC-----eEEEEEcCCCcc
Q 004203 182 AECIGSRD--FYRPIASIAFHASGELLAVAS-GH-----KLYIWRYNMREE 224 (768)
Q Consensus 182 g~~i~~l~--h~~~V~svafSPDG~~LatgS-dd-----~I~IWDl~t~~~ 224 (768)
.+-...-. ......+++. -++++++.|+ ++ .+.+||..+.+-
T Consensus 175 ~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 175 FEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp TEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred CeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 75443322 1111122222 2667777776 22 388899887654
No 333
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=79.44 E-value=25 Score=35.79 Aligned_cols=128 Identities=13% Similarity=0.094 Sum_probs=68.9
Q ss_pred CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCeEEEE--EecCCCCcEEEEE
Q 004203 91 ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLKV--LHGHRRTPWVVRF 157 (768)
Q Consensus 91 gsIrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS~D-----gtVrVWDl~tg~~l~~--l~gH~g~V~sVaf 157 (768)
..+..+|..+.+ +......-..+.+ ++++++.|+.+ ..+.+||+.+.+-... +.........+.+
T Consensus 137 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 214 (308)
T 1zgk_A 137 NSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL 214 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE
Confidence 357888887652 2222222233333 56777777654 4689999987653221 1111111222222
Q ss_pred ccCCCCEEEEEeCC-----CeEEEEECCCCcEEEEec--CCCCeEEEEEcCCCCEEEEEEC------CeEEEEEcCCCcc
Q 004203 158 HPLNPTIIASGSLD-----HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVASG------HKLYIWRYNMREE 224 (768)
Q Consensus 158 SP~dg~lLaSgS~D-----gtVrLWDl~sg~~i~~l~--h~~~V~svafSPDG~~LatgSd------d~I~IWDl~t~~~ 224 (768)
++.+++.|+.+ ..+.+||+.+.+-...-. ......+++. -++++++.|+. +.+.+||+.+.+-
T Consensus 215 ---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 215 ---HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp ---TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred ---CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 57788887764 469999998876544322 1111122222 25666666652 2278888776643
No 334
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=78.75 E-value=76 Score=34.34 Aligned_cols=137 Identities=12% Similarity=0.083 Sum_probs=92.0
Q ss_pred CCeEEEEeCCCCCC-CCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEE
Q 004203 90 AESLHHLRPKYCPL-SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASG 168 (768)
Q Consensus 90 DgsIrlWd~~t~~L-~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSg 168 (768)
+.+|-+.|+....- ....-..-+.-.+|..+.||.-. ..++.|+|+++.+.++.+.-. ..|.--.|-. .+.|+-.
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis--~~~L~lV 123 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWIS--LNTVALV 123 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECS--SSEEEEE
T ss_pred CCEEEEEECCCCCCccccccccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecC--CCeEEEE
Confidence 34688888876421 11222234566788888877665 678999999999998888754 4576667754 4556655
Q ss_pred eCCCeEEEEECCC-CcEEEEecC-----CCCeEEEEEcCCCCEEEEEE----CC----eEEEEEcCCCccccCCeEeecC
Q 004203 169 SLDHEVRLWNAST-AECIGSRDF-----YRPIASIAFHASGELLAVAS----GH----KLYIWRYNMREETSSPRIVLRT 234 (768)
Q Consensus 169 S~DgtVrLWDl~s-g~~i~~l~h-----~~~V~svafSPDG~~LatgS----dd----~I~IWDl~t~~~~~~~~~l~~h 234 (768)
+. ..|+-|++.. ..+++.++. ...|....-+++.++++..+ ++ .+.+|..+.+.. ..+.+|
T Consensus 124 T~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s----Q~ieGh 198 (365)
T 2xzh_A 124 TD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPIEGH 198 (365)
T ss_dssp ES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE----EEECCS
T ss_pred cC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc----ceeeee
Confidence 54 4799999975 355565542 34677788899999877654 33 389998877643 235555
Q ss_pred C
Q 004203 235 R 235 (768)
Q Consensus 235 ~ 235 (768)
.
T Consensus 199 a 199 (365)
T 2xzh_A 199 A 199 (365)
T ss_dssp E
T ss_pred e
Confidence 3
No 335
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=78.70 E-value=61 Score=40.37 Aligned_cols=92 Identities=12% Similarity=0.126 Sum_probs=58.9
Q ss_pred eEEEEeCCCCeEEEEEecC-CCCcEEEE---EccCCCCEEEEEe----------CCCeEEEEECCCCcEEE--EecCCCC
Q 004203 130 TVKIIDCQTGSCLKVLHGH-RRTPWVVR---FHPLNPTIIASGS----------LDHEVRLWNASTAECIG--SRDFYRP 193 (768)
Q Consensus 130 tVrVWDl~tg~~l~~l~gH-~g~V~sVa---fSP~dg~lLaSgS----------~DgtVrLWDl~sg~~i~--~l~h~~~ 193 (768)
.|++.|-.+.+.+..+.-. ...+.+++ |..+...+++.|. ..|.|++|++..++... ....++.
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 4677777777766554322 22344444 3332346787776 24689999997554332 2346788
Q ss_pred eEEEEEcCCCCEEEEEECCeEEEEEcCCCc
Q 004203 194 IASIAFHASGELLAVASGHKLYIWRYNMRE 223 (768)
Q Consensus 194 V~svafSPDG~~LatgSdd~I~IWDl~t~~ 223 (768)
+++++-- +| +|+++-+.+|++||+...+
T Consensus 888 v~al~~~-~g-~Lla~ig~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 888 VYSMVEF-NG-KLLASINSTVRLYEWTTEK 915 (1158)
T ss_dssp EEEEEEE-TT-EEEEEETTEEEEEEECTTS
T ss_pred CEEEeee-CC-EEEEEcCCEEEEEECCCCc
Confidence 8887633 34 7777888899999997664
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=76.07 E-value=7 Score=45.09 Aligned_cols=101 Identities=18% Similarity=0.149 Sum_probs=68.6
Q ss_pred CCeEEEEECCCCCEEEEEeC-CCeEEEEeCCCC------eE-------EEEEecCCCCcEEEEEccCCCCEEEEEeCCCe
Q 004203 108 RSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTG------SC-------LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHE 173 (768)
Q Consensus 108 ~~VtslafSPDG~~LaSgS~-DgtVrVWDl~tg------~~-------l~~l~gH~g~V~sVafSP~dg~lLaSgS~Dgt 173 (768)
.+..++.++|||++++.++. +.+|.++|++.- +. ..... -+-.....+|.+ +|....+--.|..
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~-~G~aYTtlfidSq 400 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG-RGNAYTTLFIDSQ 400 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS-SSEEEEEETTTTE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC-CCceEeeeeecce
Confidence 45578999999999987776 889999998741 11 22222 233466789999 7755555668999
Q ss_pred EEEEECCCC----------cEEEEecCCCCeEEEEE------cCCCCEEEEEE
Q 004203 174 VRLWNASTA----------ECIGSRDFYRPIASIAF------HASGELLAVAS 210 (768)
Q Consensus 174 VrLWDl~sg----------~~i~~l~h~~~V~svaf------SPDG~~LatgS 210 (768)
|.-|++... ..+..+.....+--+.- .|||++|++..
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 999999753 23444443333333333 67999999987
No 337
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=72.54 E-value=1.2e+02 Score=34.21 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=93.3
Q ss_pred CCeEEEEeCCCCC-CCCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEE
Q 004203 90 AESLHHLRPKYCP-LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASG 168 (768)
Q Consensus 90 DgsIrlWd~~t~~-L~gH~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSg 168 (768)
+.+|-+.|+.... .....-..-+.-.+|..+.||.=. ..++.|||+++.+.++.+.-.. .|.--.|-. .+.|+-.
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis--~~~l~lV 122 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWIS--LNTVALV 122 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEE--TTEEEEE
T ss_pred CCeEEEEECCCCCcceecccccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecC--CCeEEEE
Confidence 4468888887642 111222334667788888777665 6799999999999988887554 465668865 4555555
Q ss_pred eCCCeEEEEECCC-CcEEEEecC-----CCCeEEEEEcCCCCEEEEEE----CC----eEEEEEcCCCccccCCeEeecC
Q 004203 169 SLDHEVRLWNAST-AECIGSRDF-----YRPIASIAFHASGELLAVAS----GH----KLYIWRYNMREETSSPRIVLRT 234 (768)
Q Consensus 169 S~DgtVrLWDl~s-g~~i~~l~h-----~~~V~svafSPDG~~LatgS----dd----~I~IWDl~t~~~~~~~~~l~~h 234 (768)
+ +..|+-|++.. ..+++.++. ...|....-+++.++++..+ ++ .+.+|..+.+.. ..+.+|
T Consensus 123 T-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s----Q~ieGh 197 (494)
T 1bpo_A 123 T-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPIEGH 197 (494)
T ss_dssp C-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE----EEECCS
T ss_pred c-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc----chheee
Confidence 5 45799999974 345565542 34677788899999887654 33 389998877643 246666
Q ss_pred CCCe
Q 004203 235 RRSL 238 (768)
Q Consensus 235 ~~~V 238 (768)
....
T Consensus 198 aa~F 201 (494)
T 1bpo_A 198 AASF 201 (494)
T ss_dssp EEEE
T ss_pred eeee
Confidence 4433
No 338
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=72.48 E-value=2.8 Score=45.14 Aligned_cols=108 Identities=12% Similarity=0.048 Sum_probs=66.2
Q ss_pred CCEEEEEeCCCeEEEEeCCCCeEEEEEecC-CCCcEEEEE--ccCCCCEEEEE-eCCCeEEEEECCCCcEEEEecC----
Q 004203 119 GKTLASTHGDHTVKIIDCQTGSCLKVLHGH-RRTPWVVRF--HPLNPTIIASG-SLDHEVRLWNASTAECIGSRDF---- 190 (768)
Q Consensus 119 G~~LaSgS~DgtVrVWDl~tg~~l~~l~gH-~g~V~sVaf--SP~dg~lLaSg-S~DgtVrLWDl~sg~~i~~l~h---- 190 (768)
+.+++.++.||.|+-+|.++|+.+..++.. ..++....- .+.++..++.. ..||.|+.+|..+|.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 347889999999999999999999998754 122222110 01122333333 6899999999998865544331
Q ss_pred -CCCeEE---EEE-cC----CCCEEEEEE-CCeEEEEEcCCCcccc
Q 004203 191 -YRPIAS---IAF-HA----SGELLAVAS-GHKLYIWRYNMREETS 226 (768)
Q Consensus 191 -~~~V~s---vaf-SP----DG~~LatgS-dd~I~IWDl~t~~~~~ 226 (768)
..++.. ... .+ .+..+++++ ++++...|+++++...
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEE
Confidence 122221 000 00 344566666 5569999999987644
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=72.40 E-value=63 Score=33.28 Aligned_cols=100 Identities=14% Similarity=0.170 Sum_probs=55.4
Q ss_pred CCCEEEEEeC-C---------CeEEEEeCCCCeEEEEEecC-CCCcEEEEEccCCCCEEEEEeCC---------------
Q 004203 118 DGKTLASTHG-D---------HTVKIIDCQTGSCLKVLHGH-RRTPWVVRFHPLNPTIIASGSLD--------------- 171 (768)
Q Consensus 118 DG~~LaSgS~-D---------gtVrVWDl~tg~~l~~l~gH-~g~V~sVafSP~dg~lLaSgS~D--------------- 171 (768)
++++++.|+. + ..+.+||..+.+-...-... ..........- ++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~ 143 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVH-NGKAYVTGGVNQNIFNGYFEDLNEAG 143 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEE-TTEEEEEECCCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEE-CCEEEEEeCcCCCcCcccccchhhcC
Confidence 5667776665 2 46999999886532211111 11111112223 67888888764
Q ss_pred ------------------------CeEEEEECCCCcEEEE--ecCCCCe-EEEEEcCCCCEEEEEEC-------CeEEEE
Q 004203 172 ------------------------HEVRLWNASTAECIGS--RDFYRPI-ASIAFHASGELLAVASG-------HKLYIW 217 (768)
Q Consensus 172 ------------------------gtVrLWDl~sg~~i~~--l~h~~~V-~svafSPDG~~LatgSd-------d~I~IW 217 (768)
..+.+||..+.+-... +...... .+++.. ++++++.|+. +.+.+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~ 222 (357)
T 2uvk_A 144 KDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFEL 222 (357)
T ss_dssp TCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEE
T ss_pred CcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEE
Confidence 5799999988764433 2222222 233332 5666666641 237788
Q ss_pred Ec
Q 004203 218 RY 219 (768)
Q Consensus 218 Dl 219 (768)
|+
T Consensus 223 d~ 224 (357)
T 2uvk_A 223 DF 224 (357)
T ss_dssp EC
T ss_pred Ee
Confidence 87
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=71.41 E-value=91 Score=31.56 Aligned_cols=126 Identities=14% Similarity=0.082 Sum_probs=67.1
Q ss_pred EEEEeCCCCC------CCCCCCCeEEEEECCCCCEEEEEeCC-------CeEEEEeCCCCeEEEE--EecCCCCcEEEEE
Q 004203 93 LHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-------HTVKIIDCQTGSCLKV--LHGHRRTPWVVRF 157 (768)
Q Consensus 93 IrlWd~~t~~------L~gH~~~VtslafSPDG~~LaSgS~D-------gtVrVWDl~tg~~l~~--l~gH~g~V~sVaf 157 (768)
+..+|..+.+ +.........+.+ +++.++.|+.+ ..+.+||..+.+-... +....... ++..
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~ 156 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS 156 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE
Confidence 6777876652 2211122222333 56777777754 3588999987653322 11111111 1222
Q ss_pred ccCCCCEEEEEeC------CCeEEEEECCCCcEEEEe--cCCCCeEEEEEcCCCCEEEEEEC--C----eEEEEEcCCCc
Q 004203 158 HPLNPTIIASGSL------DHEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASG--H----KLYIWRYNMRE 223 (768)
Q Consensus 158 SP~dg~lLaSgS~------DgtVrLWDl~sg~~i~~l--~h~~~V~svafSPDG~~LatgSd--d----~I~IWDl~t~~ 223 (768)
- ++++++.|+. -..+.+||+.+.+-...- .......+++. -++++++.|+. + .+.+||+.+.+
T Consensus 157 -~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 157 -H-NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp -E-TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred -E-CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 3 6777777764 236999999987644432 22221122222 25677777762 2 28889988765
Q ss_pred c
Q 004203 224 E 224 (768)
Q Consensus 224 ~ 224 (768)
-
T Consensus 234 W 234 (318)
T 2woz_A 234 W 234 (318)
T ss_dssp E
T ss_pred E
Confidence 4
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=67.52 E-value=47 Score=38.73 Aligned_cols=132 Identities=14% Similarity=0.104 Sum_probs=74.0
Q ss_pred eEEEEeCCCCC---CC--CCCCCeEEEEECCCCCEEEEEeCCC--eEEEEeCCCCeEEEEEec------CCCCcEEEEEc
Q 004203 92 SLHHLRPKYCP---LS--PPPRSTIAAAFSPDGKTLASTHGDH--TVKIIDCQTGSCLKVLHG------HRRTPWVVRFH 158 (768)
Q Consensus 92 sIrlWd~~t~~---L~--gH~~~VtslafSPDG~~LaSgS~Dg--tVrVWDl~tg~~l~~l~g------H~g~V~sVafS 158 (768)
.+.+||..+.+ +. .....-.+++.-.+++.++.|+.++ .+.+||..+.+-. .+.. .......+.+.
T Consensus 469 dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~-~~~~~g~~p~~r~~~~a~v~~ 547 (695)
T 2zwa_A 469 DNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFK-DVTPKDEFFQNSLVSAGLEFD 547 (695)
T ss_dssp CCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEE-ECCCSSGGGGSCCBSCEEEEE
T ss_pred cEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceE-EccCCCCCCCcccceeEEEEe
Confidence 47788887652 11 1112222333334788888887654 7999999887532 2221 12222335555
Q ss_pred cCCCCEEEEEeC--C-----CeEEEEECCCCc------EEEEec---CCCCeEEEEEcCCCCEEEEEEC---------Ce
Q 004203 159 PLNPTIIASGSL--D-----HEVRLWNASTAE------CIGSRD---FYRPIASIAFHASGELLAVASG---------HK 213 (768)
Q Consensus 159 P~dg~lLaSgS~--D-----gtVrLWDl~sg~------~i~~l~---h~~~V~svafSPDG~~LatgSd---------d~ 213 (768)
..++.+++.|+. + ..+.+||+.+.+ -..... ....-.+++...++++++.|+. +.
T Consensus 548 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 627 (695)
T 2zwa_A 548 PVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNS 627 (695)
T ss_dssp TTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTS
T ss_pred CCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCe
Confidence 523678888765 2 469999998876 222111 1112223333444777777762 23
Q ss_pred EEEEEcCCCcc
Q 004203 214 LYIWRYNMREE 224 (768)
Q Consensus 214 I~IWDl~t~~~ 224 (768)
+.+||+.+.+.
T Consensus 628 v~~yd~~t~~W 638 (695)
T 2zwa_A 628 IISLDPLSETL 638 (695)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCeE
Confidence 99999987754
No 342
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=67.39 E-value=39 Score=37.61 Aligned_cols=105 Identities=12% Similarity=0.085 Sum_probs=60.5
Q ss_pred CCcEEEEEccCCCC-EEEEEeCCCeEEEEECCCCc---EEEEe----c------CCCCeEEEEEcCC---CCEEEEE-E-
Q 004203 150 RTPWVVRFHPLNPT-IIASGSLDHEVRLWNASTAE---CIGSR----D------FYRPIASIAFHAS---GELLAVA-S- 210 (768)
Q Consensus 150 g~V~sVafSP~dg~-lLaSgS~DgtVrLWDl~sg~---~i~~l----~------h~~~V~svafSPD---G~~Latg-S- 210 (768)
...+.|+|.| ++. .++.+.+.|.|++++..... .+..+ . .......|+|+|+ ..+|++. +
T Consensus 14 ~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 3477899999 664 45556788999999754321 11211 1 1356788999997 3333332 2
Q ss_pred C------------CeEEEEEcCCCc--c-----ccCCeEee--cCCCCeEEEEEccCCCeEEEEEe
Q 004203 211 G------------HKLYIWRYNMRE--E-----TSSPRIVL--RTRRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 211 d------------d~I~IWDl~t~~--~-----~~~~~~l~--~h~~~V~sVaFSPDG~~LlaS~s 255 (768)
. ..|..|.+.... . ......+. .....-..|.|.|||..+++.+.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 136667765321 0 01111111 12345789999999987776665
No 343
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=61.52 E-value=3.1e+02 Score=34.08 Aligned_cols=110 Identities=14% Similarity=0.160 Sum_probs=67.7
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEE-ecCCCCcEEEEEccCC-----CCEEEEEeC-CCeEEEEEC
Q 004203 107 PRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVL-HGHRRTPWVVRFHPLN-----PTIIASGSL-DHEVRLWNA 179 (768)
Q Consensus 107 ~~~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l-~gH~g~V~sVafSP~d-----g~lLaSgS~-DgtVrLWDl 179 (768)
...|..++.+. .+++.++ .+.+.++++++++..... ..-...|.|+++.|.. .++++.|.. |++|+|+++
T Consensus 513 ~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL 589 (1158)
T 3ei3_A 513 AKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKL 589 (1158)
T ss_dssp CCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEET
T ss_pred CCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEEC
Confidence 34577777663 4666665 578888888766432211 1234579999987622 468999997 999999999
Q ss_pred CCCcEEEEecC--CCCeEEEEEcC--CCCEEEEEECCe-EEEEEc
Q 004203 180 STAECIGSRDF--YRPIASIAFHA--SGELLAVASGHK-LYIWRY 219 (768)
Q Consensus 180 ~sg~~i~~l~h--~~~V~svafSP--DG~~LatgSdd~-I~IWDl 219 (768)
.+-+.+..... .....++.+.. ...+|..|-.++ +..+.+
T Consensus 590 ~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 590 PSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp TTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred CCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 98766654332 23444444432 234677776555 433444
No 344
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=60.85 E-value=1.5e+02 Score=30.30 Aligned_cols=80 Identities=8% Similarity=-0.173 Sum_probs=38.0
Q ss_pred CeEEEEeCCCCeEEEE--EecCCCCcEEEEEccCCCCEEEEEeC------CCeEEEEEC--CCCcEEEE--ecCCC-CeE
Q 004203 129 HTVKIIDCQTGSCLKV--LHGHRRTPWVVRFHPLNPTIIASGSL------DHEVRLWNA--STAECIGS--RDFYR-PIA 195 (768)
Q Consensus 129 gtVrVWDl~tg~~l~~--l~gH~g~V~sVafSP~dg~lLaSgS~------DgtVrLWDl--~sg~~i~~--l~h~~-~V~ 195 (768)
..+.+||..+.+-... +......-.+++.. ++.+++.|+. ...+.+||+ .+.+-... +.... ...
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 5799999988653322 22111111223332 5677777653 346888887 44433222 11111 112
Q ss_pred EEEEcCCCCEEEEEE
Q 004203 196 SIAFHASGELLAVAS 210 (768)
Q Consensus 196 svafSPDG~~LatgS 210 (768)
..+...+++++++|+
T Consensus 246 ~~~~~~~~~iyv~GG 260 (357)
T 2uvk_A 246 GFAGISNDSLIFAGG 260 (357)
T ss_dssp CEEEEETTEEEEECC
T ss_pred ceEEEECCEEEEEcC
Confidence 112233566667665
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=59.80 E-value=80 Score=36.72 Aligned_cols=110 Identities=15% Similarity=0.182 Sum_probs=64.0
Q ss_pred EEEECCCCCEEEEEeCC------CeEEEEeCCCCeEEEE--EecCCCCcEEEEEccCCCCEEEEEeCCC--eEEEEECCC
Q 004203 112 AAAFSPDGKTLASTHGD------HTVKIIDCQTGSCLKV--LHGHRRTPWVVRFHPLNPTIIASGSLDH--EVRLWNAST 181 (768)
Q Consensus 112 slafSPDG~~LaSgS~D------gtVrVWDl~tg~~l~~--l~gH~g~V~sVafSP~dg~lLaSgS~Dg--tVrLWDl~s 181 (768)
.+.+..+++.++.|+.+ ..+.+||..+.+-... +...... .+++.-. ++.+++.|+.++ .+.+||..+
T Consensus 445 ~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t 522 (695)
T 2zwa_A 445 FTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLP-DGNVLILGGVTEGPAMLLYNVTE 522 (695)
T ss_dssp EEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECT-TSCEEEECCBCSSCSEEEEETTT
T ss_pred EEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEc-CCEEEEECCCCCCCCEEEEECCC
Confidence 33333267777777653 3589999988642221 1111111 1233323 678888887655 799999988
Q ss_pred CcEEEEec------CCCCeEEEEEcCC-CCEEEEEEC--------CeEEEEEcCCCc
Q 004203 182 AECIGSRD------FYRPIASIAFHAS-GELLAVASG--------HKLYIWRYNMRE 223 (768)
Q Consensus 182 g~~i~~l~------h~~~V~svafSPD-G~~LatgSd--------d~I~IWDl~t~~ 223 (768)
.+-...-. .......+.+..+ +++++.|+. +.+.+||+.+..
T Consensus 523 ~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 76443321 1122233566665 666677652 238999998876
No 346
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=56.51 E-value=2e+02 Score=30.20 Aligned_cols=109 Identities=9% Similarity=-0.029 Sum_probs=55.9
Q ss_pred CCCeEEEEECC-CCCEEEEEeCCC----eEEEEeCCCCeEEEEEec--------------CCCCcEEEEEccCC-CCEEE
Q 004203 107 PRSTIAAAFSP-DGKTLASTHGDH----TVKIIDCQTGSCLKVLHG--------------HRRTPWVVRFHPLN-PTIIA 166 (768)
Q Consensus 107 ~~~VtslafSP-DG~~LaSgS~Dg----tVrVWDl~tg~~l~~l~g--------------H~g~V~sVafSP~d-g~lLa 166 (768)
...|.+|++.| +...|+.++..+ .|...+ +.|+.-..+.. ....|..+++.|.+ ...+.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 34699999999 445555555555 455443 33433222211 11246778888743 45555
Q ss_pred EEeCCCeEEEEECCCCcEEEEec--------------------CCCCeEEEEEcCC-CCEEEEEE-CCeEEEE
Q 004203 167 SGSLDHEVRLWNASTAECIGSRD--------------------FYRPIASIAFHAS-GELLAVAS-GHKLYIW 217 (768)
Q Consensus 167 SgS~DgtVrLWDl~sg~~i~~l~--------------------h~~~V~svafSPD-G~~LatgS-dd~I~IW 217 (768)
.+...+.|+..+- .|+....+. ....+.++.++|. ...|+++. .+.|...
T Consensus 133 ~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 133 AGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp EEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE
T ss_pred EEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE
Confidence 5555565555432 222222211 1235778999984 34444443 5555544
No 347
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=55.70 E-value=42 Score=40.87 Aligned_cols=38 Identities=21% Similarity=0.362 Sum_probs=33.9
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEe
Q 004203 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH 146 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~ 146 (768)
.|.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 57888888899999999999999999999999887653
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=53.08 E-value=45 Score=38.55 Aligned_cols=103 Identities=11% Similarity=0.130 Sum_probs=60.9
Q ss_pred CcEEEEEccCCCCEEEE-EeCCCeEEEEECCCC------cE-------EEEecCCCCeEEEEEcCCCCEEEEEE--CCeE
Q 004203 151 TPWVVRFHPLNPTIIAS-GSLDHEVRLWNASTA------EC-------IGSRDFYRPIASIAFHASGELLAVAS--GHKL 214 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaS-gS~DgtVrLWDl~sg------~~-------i~~l~h~~~V~svafSPDG~~LatgS--dd~I 214 (768)
....+.++| ||++++. +-.+.++.++|++.- +. .......-...-.+|+++| ..++.- +..|
T Consensus 324 sPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqv 401 (638)
T 3sbq_A 324 NPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQV 401 (638)
T ss_dssp SCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTEE
T ss_pred CCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecceE
Confidence 345688999 7776665 455889999999741 11 2222333455678999999 444444 5669
Q ss_pred EEEEcCCC------ccccCCeEeecCCCCeEEEEE------ccCCCeEEEEEe
Q 004203 215 YIWRYNMR------EETSSPRIVLRTRRSLRAVHF------HPHAAPLLLTAE 255 (768)
Q Consensus 215 ~IWDl~t~------~~~~~~~~l~~h~~~V~sVaF------SPDG~~LlaS~s 255 (768)
..|++... +..........-...+-.+.- .|||++|++-..
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 99999754 111111111222233333333 689998876654
No 349
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=50.21 E-value=3.7e+02 Score=31.47 Aligned_cols=238 Identities=8% Similarity=-0.009 Sum_probs=122.4
Q ss_pred cCCCEEEEEeCCC----eEEEEeCCCCCCCC-CCCC-----------eEEEEECCCCCEEEEEe-----------CCCeE
Q 004203 79 DARRGLASWVEAE----SLHHLRPKYCPLSP-PPRS-----------TIAAAFSPDGKTLASTH-----------GDHTV 131 (768)
Q Consensus 79 d~g~~LvSgs~Dg----sIrlWd~~t~~L~g-H~~~-----------VtslafSPDG~~LaSgS-----------~DgtV 131 (768)
++...+++.+..| .|+++|+.++++.. .-.+ ...++|- |.+.++.+. .-.+|
T Consensus 140 ~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~~~~~~~~~v 218 (711)
T 4hvt_A 140 NPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEITSSLYPNSL 218 (711)
T ss_dssp STTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCBCTTSSBCEE
T ss_pred CCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCcCcCCCCCEE
Confidence 3556666666555 49999999885432 1111 1344786 444554442 23679
Q ss_pred EEEeCCCC--eEEEEEecCCCCcE-EEEEccCCCC-----EEEEEeCC---CeEEEEECCC--CcEEEEecCCCCeEEEE
Q 004203 132 KIIDCQTG--SCLKVLHGHRRTPW-VVRFHPLNPT-----IIASGSLD---HEVRLWNAST--AECIGSRDFYRPIASIA 198 (768)
Q Consensus 132 rVWDl~tg--~~l~~l~gH~g~V~-sVafSP~dg~-----lLaSgS~D---gtVrLWDl~s--g~~i~~l~h~~~V~sva 198 (768)
++|.+-+. +-...+.+....+. ....++ +++ .+++.+.+ ..+++.|... ++.+. +....... +.
T Consensus 219 ~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~-~~ 295 (711)
T 4hvt_A 219 YIWKRGESIEKAKKLFEVPKEYIYVSAGKLL-SDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQK-INMPSDAT-LQ 295 (711)
T ss_dssp EEEETTSCGGGCEEEEECCTTSCEEEEEESS-CTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEE-CCSCTTCE-EE
T ss_pred EEEECCCChHHCeEEeccCCCceEEEEEEec-CCCceEEEEEEEEecccCceeEEEEcCCCCCCcceE-eecCCcce-Ee
Confidence 99988764 23455655444443 234455 444 35554422 4677778764 43233 33222222 34
Q ss_pred EcCCCCEEEEE-----------ECCeEEEEEcCCCcc----ccCCeEeec--CCCCeEEEEEccCCCeEEEEEeeCCcCC
Q 004203 199 FHASGELLAVA-----------SGHKLYIWRYNMREE----TSSPRIVLR--TRRSLRAVHFHPHAAPLLLTAEVNDLDS 261 (768)
Q Consensus 199 fSPDG~~Latg-----------Sdd~I~IWDl~t~~~----~~~~~~l~~--h~~~V~sVaFSPDG~~LlaS~svwdl~s 261 (768)
.+.++.+++.. -.++|.+.|+.+... ......+.. ....+..+.|..+ .++++.......
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~l~~~~~~~~~~- 372 (711)
T 4hvt_A 296 GSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD--RVFLATYDNVVA- 372 (711)
T ss_dssp EEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS--CEEEEEEETTEE-
T ss_pred eeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC--EEEEEEEECCEE-
Confidence 45566655533 133489999876421 011222233 3456778888865 355544322111
Q ss_pred CCcceeEeecCCcccCCCCeEEEecCCCCC--CCCcccccCCCCCCceEEEEecCCCEEEEEecCCCCCcceEEeccCCC
Q 004203 262 SESSLTLATSPGYWRYPPPVICMAGAHSSS--HPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSS 339 (768)
Q Consensus 262 g~~~~~L~t~~G~~~~p~~~V~l~d~~s~d--~~~L~~~~~~~slpil~psFSpDG~rIv~~~~d~~~Gs~~~~~~~~ss 339 (768)
.+.+.+...+. ...+... +. ...+...++++|++.+++...+...+...+..+.. .
T Consensus 373 -------------------~l~~~~~~~g~~~~~~~i~l-p~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~ 430 (711)
T 4hvt_A 373 -------------------KVVTFTLENEQWTKPVVLKL-PY-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-H 430 (711)
T ss_dssp -------------------EEEEECEETTEECCCEEECC-CS-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-S
T ss_pred -------------------EEEEEECCCCceEEEeccCC-CC-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-C
Confidence 11111111110 0000000 00 01122445668899999998888899988888876 4
Q ss_pred ceeeee
Q 004203 340 SSVRLL 345 (768)
Q Consensus 340 ~~~rl~ 345 (768)
..+++.
T Consensus 431 ~~~~l~ 436 (711)
T 4hvt_A 431 ELKIIR 436 (711)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 444343
No 350
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=47.77 E-value=13 Score=33.58 Aligned_cols=17 Identities=29% Similarity=0.708 Sum_probs=12.1
Q ss_pred chhhhhh-HhhhccceeE
Q 004203 637 GTVLTSR-AIRAAHCLTS 653 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~ 653 (768)
|.++..+ .++||||+..
T Consensus 29 GsLIs~~~VLTAAHC~~~ 46 (131)
T 1yph_C 29 GSLINENWVVTAAHCGVT 46 (131)
T ss_dssp EEEEETTEEEECGGGCCC
T ss_pred EEEeeCCEEEECHHHCCC
Confidence 4455555 7899999864
No 351
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=46.17 E-value=2.4e+02 Score=32.57 Aligned_cols=59 Identities=14% Similarity=0.063 Sum_probs=42.1
Q ss_pred CcEEEEEccCCCCEEEEEeC------------CCeEEEEECCCCcEEEEec--CCCCeEEEEEcCCCCEEEEEE
Q 004203 151 TPWVVRFHPLNPTIIASGSL------------DHEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVAS 210 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~------------DgtVrLWDl~sg~~i~~l~--h~~~V~svafSPDG~~LatgS 210 (768)
....|.|.+ +|.+.+.... ...|+.+|..+++....+. ....++.++|+||++.|++.-
T Consensus 477 sPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 356799999 7887774322 1267777887888766553 235689999999999887764
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=45.86 E-value=1.4e+02 Score=36.32 Aligned_cols=38 Identities=21% Similarity=0.336 Sum_probs=31.9
Q ss_pred CcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Q 004203 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD 189 (768)
Q Consensus 151 ~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~ 189 (768)
.+.++...+ +..++++.+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 355666666 78899999999999999999999988754
No 353
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=45.51 E-value=7.7 Score=38.56 Aligned_cols=76 Identities=17% Similarity=0.319 Sum_probs=40.5
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---ecCcEEEEeecCCC--
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---VSDMELVRVLPSAE-- 710 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-- 710 (768)
|.++..+ .++||||+..-...+..-.+.+|.-.+.. ...+.....+.|.+++. -.|+.|++.-....
T Consensus 26 GtLI~~~~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~-------~~~~~~~~~~~v~~i~~hp~~~DiALl~L~~~v~~~ 98 (234)
T 2asu_B 26 GSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNP-------QHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLN 98 (234)
T ss_dssp EEEEETTEEEEEGGGSSCTTCCCTTCEEEESCSBSSC-------CTTCTTCEEEEEEEEEECSTTCCEEEEEESSCCCCS
T ss_pred EEEEeCCEEEECHHHcCCCCCCcccEEEEEeeeeccC-------CCCCCceEEEEEEEEecCCCCCCeEEEEeCCcCcCC
Confidence 4555555 78999998654333444444444222211 11123345566666654 25888888543332
Q ss_pred CceeeeEec
Q 004203 711 DEVNVACFH 719 (768)
Q Consensus 711 ~~~~~~~~~ 719 (768)
+.|.-+|.-
T Consensus 99 ~~v~picLp 107 (234)
T 2asu_B 99 QRVALICLP 107 (234)
T ss_dssp SSSCCCBCC
T ss_pred CcEeccCCC
Confidence 356666664
No 354
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=43.73 E-value=6e+02 Score=32.76 Aligned_cols=136 Identities=7% Similarity=0.015 Sum_probs=83.2
Q ss_pred CCCeEEEEeCCCC--C---CCCC----CCCeEEEEECCCCCEEEEEe-------CCCeEEEEeCCCCeEEEEEecCCCCc
Q 004203 89 EAESLHHLRPKYC--P---LSPP----PRSTIAAAFSPDGKTLASTH-------GDHTVKIIDCQTGSCLKVLHGHRRTP 152 (768)
Q Consensus 89 ~DgsIrlWd~~t~--~---L~gH----~~~VtslafSPDG~~LaSgS-------~DgtVrVWDl~tg~~l~~l~gH~g~V 152 (768)
.+..|..|++... + +.-| ...|..-..+++.++++..| -.|.+.+|..+.+ ....+.||.+..
T Consensus 123 T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F 201 (1630)
T 1xi4_A 123 TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASF 201 (1630)
T ss_pred cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhh
Confidence 3578899998632 1 2222 45688889999999988544 3688999998754 356778887765
Q ss_pred EEEEEc--cCCCCEEEEEeCC---CeEEEEECCCC---cE--EE----Ee-c---CCCCeEEEEEcCCCCEEEEEEC-Ce
Q 004203 153 WVVRFH--PLNPTIIASGSLD---HEVRLWNASTA---EC--IG----SR-D---FYRPIASIAFHASGELLAVASG-HK 213 (768)
Q Consensus 153 ~sVafS--P~dg~lLaSgS~D---gtVrLWDl~sg---~~--i~----~l-~---h~~~V~svafSPDG~~LatgSd-d~ 213 (768)
..+... +....+++.+.+. +.++|-++... .. .+ .+ . ..+--.++..++.-..+..-+. |-
T Consensus 202 ~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~ 281 (1630)
T 1xi4_A 202 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY 281 (1630)
T ss_pred heeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCce
Confidence 544442 2123455554442 68999998543 11 00 01 1 0112234555665556666664 55
Q ss_pred EEEEEcCCCccc
Q 004203 214 LYIWRYNMREET 225 (768)
Q Consensus 214 I~IWDl~t~~~~ 225 (768)
|+++|+.++...
T Consensus 282 ~~~~d~~t~~~i 293 (1630)
T 1xi4_A 282 IHLYDLETGTCI 293 (1630)
T ss_pred EEEEecccchhh
Confidence 999999998753
No 355
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=43.70 E-value=2.6e+02 Score=27.99 Aligned_cols=106 Identities=8% Similarity=0.088 Sum_probs=58.0
Q ss_pred ECCCCCEEEEEeC----CC-------eEEEEeCCCCeEEEE--EecCCCCcEEEEEccCCCCEEEEEeCC-------CeE
Q 004203 115 FSPDGKTLASTHG----DH-------TVKIIDCQTGSCLKV--LHGHRRTPWVVRFHPLNPTIIASGSLD-------HEV 174 (768)
Q Consensus 115 fSPDG~~LaSgS~----Dg-------tVrVWDl~tg~~l~~--l~gH~g~V~sVafSP~dg~lLaSgS~D-------gtV 174 (768)
...+++.++.|+. ++ .+.+||..+.+-... +.........+.+ ++.+++.|+.+ ..+
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~ 129 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV---DDKIYVVAGKDLQTEASLDSV 129 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE---TTEEEEEEEEBTTTCCEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE---CCEEEEEcCccCCCCcccceE
Confidence 3457778777873 11 278899887653221 1111111222222 56777777754 368
Q ss_pred EEEECCCCcEEEEecCCCC--eEEEEEcCCCCEEEEEEC-------CeEEEEEcCCCcc
Q 004203 175 RLWNASTAECIGSRDFYRP--IASIAFHASGELLAVASG-------HKLYIWRYNMREE 224 (768)
Q Consensus 175 rLWDl~sg~~i~~l~h~~~--V~svafSPDG~~LatgSd-------d~I~IWDl~t~~~ 224 (768)
.+||..+.+-...-....+ -.+++. -++++++.|+. +.+.+||..+.+-
T Consensus 130 ~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 130 LCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp EEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred EEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 8999988765443221111 112222 46666666652 2389999987754
No 356
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=42.24 E-value=14 Score=39.74 Aligned_cols=65 Identities=14% Similarity=0.062 Sum_probs=44.3
Q ss_pred eCCCeEEEEeCCCCeEEEEEecC----CCCcEE---EEE-----ccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Q 004203 126 HGDHTVKIIDCQTGSCLKVLHGH----RRTPWV---VRF-----HPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY 191 (768)
Q Consensus 126 S~DgtVrVWDl~tg~~l~~l~gH----~g~V~s---Vaf-----SP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~ 191 (768)
..||.|+.+|.++|.....+.-. ..++.. ... .. .+..+++|+.++.+.-.|+++|+.+..+...
T Consensus 64 ~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~-~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 64 FGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIV-EDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp STTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC-----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred CCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccc-cCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 58999999999988665444321 111111 000 01 3567889999999999999999999987644
No 357
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=41.20 E-value=89 Score=40.08 Aligned_cols=119 Identities=14% Similarity=0.173 Sum_probs=81.3
Q ss_pred CCeEEEEeCCCCeEEEEEecCCCCcEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCeEEEEEcCCCCEEE
Q 004203 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLA 207 (768)
Q Consensus 128 DgtVrVWDl~tg~~l~~l~gH~g~V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h~~~V~svafSPDG~~La 207 (768)
...|.|.|+.++..+..-. - ...+.-.+| ..+++|-=. ..++.|+|+++.+.++.+....+|.--.|-.+ +.|+
T Consensus 47 ~~~vvIidl~~~~~~~rrp--i-~AdsAIMnP-~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~-~~l~ 120 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP--I-SADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVA 120 (1630)
T ss_pred CceEEEEECCCCCCccccc--c-cchhhccCC-CcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCC-CeeE
Confidence 3478888888765432111 1 122345688 666666543 67899999999988888888888888888754 4577
Q ss_pred EEECCeEEEEEcCCCccccCCeEeec-C----CCCeEEEEEccCCCeEEEEEe
Q 004203 208 VASGHKLYIWRYNMREETSSPRIVLR-T----RRSLRAVHFHPHAAPLLLTAE 255 (768)
Q Consensus 208 tgSdd~I~IWDl~t~~~~~~~~~l~~-h----~~~V~sVaFSPDG~~LlaS~s 255 (768)
..++..|+-|++..... |.+++. | ...|-.-..+++.++++..|-
T Consensus 121 lVT~~aVyHW~~~~~s~---P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi 170 (1630)
T 1xi4_A 121 LVTDNAVYHWSMEGESQ---PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (1630)
T ss_pred EEcCCeEEEeccCCCCc---cHHHHhcchhcccCeeEEeeeCCCCCeEEEEee
Confidence 77788899999965332 222222 2 456777888999998887664
No 358
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=40.78 E-value=13 Score=36.87 Aligned_cols=67 Identities=24% Similarity=0.443 Sum_probs=36.7
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE-------------------
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR------------------- 696 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 696 (768)
|.++..+ .++||||+. ..+.+-+|....+ ..+....++.|.+++.
T Consensus 28 GsLIs~~~VLTAAHC~~--------~~~~v~~G~~~~~-------~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~ 92 (237)
T 1gvz_A 28 GVLVHPQWVLTAAHCMS--------DDYQIWLGRHNLS-------KDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDD 92 (237)
T ss_dssp EEEEETTEEEECGGGCC--------SSCEEEESCSBTT-------SCCTTCEEECEEEEEECTTSCGGGGGCSSCCTTSC
T ss_pred eEEeeCCEEEEcHHhCC--------CCCeEEEeecccc-------cCCCCceEEEeeeEecCCccCcccccccccccccc
Confidence 5666655 789999984 2333444443321 1122234566666654
Q ss_pred -ecCcEEEEeecCCC--CceeeeEe
Q 004203 697 -VSDMELVRVLPSAE--DEVNVACF 718 (768)
Q Consensus 697 -~~~~~~~~~~~~~~--~~~~~~~~ 718 (768)
..|+.|++.-.... +.|..+|.
T Consensus 93 ~~~DIALl~L~~~~~~~~~v~picL 117 (237)
T 1gvz_A 93 ISHDLMLLRLAQPARITDAVKILDL 117 (237)
T ss_dssp CTTCCEEEEESSCCCCBTTBCCCCC
T ss_pred cCCceEEEEeCCCcccCCcEeeeEC
Confidence 46888888643332 34555555
No 359
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=38.84 E-value=3.6e+02 Score=30.98 Aligned_cols=57 Identities=16% Similarity=0.081 Sum_probs=40.4
Q ss_pred cEEEEEccCCCCEEEEEeCC------------CeEEEEECCCCcEEEEec--CCCCeEEEEEcCCCCEEEEE
Q 004203 152 PWVVRFHPLNPTIIASGSLD------------HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVA 209 (768)
Q Consensus 152 V~sVafSP~dg~lLaSgS~D------------gtVrLWDl~sg~~i~~l~--h~~~V~svafSPDG~~Latg 209 (768)
.-.|+|+| .+++++.-..+ ..+.+.+..+++..+.+. ....++.++|+||++.|++.
T Consensus 478 PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45689999 88877664332 246666777777665543 45689999999999877665
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=37.77 E-value=2.1e+02 Score=30.95 Aligned_cols=92 Identities=8% Similarity=0.006 Sum_probs=0.0
Q ss_pred eEEEEeCCCC--eEEEEEecC------CCCcEEEEEc---cC----CCCEEEEEeCCCeEEEEECCCCcEEEEec---CC
Q 004203 130 TVKIIDCQTG--SCLKVLHGH------RRTPWVVRFH---PL----NPTIIASGSLDHEVRLWNASTAECIGSRD---FY 191 (768)
Q Consensus 130 tVrVWDl~tg--~~l~~l~gH------~g~V~sVafS---P~----dg~lLaSgS~DgtVrLWDl~sg~~i~~l~---h~ 191 (768)
+|.+||+.++ +.++.+.-. ...+..+++. |. ++...++=+....|.++|+.+++..+... ..
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Q ss_pred C----------------CeEEEEEcCC----CCEEEEEECCeEEEEEcCC
Q 004203 192 R----------------PIASIAFHAS----GELLAVASGHKLYIWRYNM 221 (768)
Q Consensus 192 ~----------------~V~svafSPD----G~~LatgSdd~I~IWDl~t 221 (768)
. .+..++.+|+ ++.|+...-.+-++|.+.+
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T 253 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNT 253 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEH
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEH
No 361
>1vqy_A Hypothetical protein AGR_PAT_315; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.40A {Agrobacterium tumefaciens str} SCOP: d.58.4.13
Probab=37.37 E-value=15 Score=33.12 Aligned_cols=21 Identities=33% Similarity=0.559 Sum_probs=18.2
Q ss_pred ceEEEEEEEEeecccccchhh
Q 004203 620 HQVIYELRIYSLEEATFGTVL 640 (768)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~ 640 (768)
|.+|||||.|.|..++..+.+
T Consensus 11 ~~~~yElRtY~i~Pg~~~~f~ 31 (116)
T 1vqy_A 11 HHMIVEERIYRIRGGKMQEYL 31 (116)
T ss_dssp -CCEEEEEEEEECTTCHHHHH
T ss_pred ceeEEEEEEEEEcCCCHHHHH
Confidence 689999999999999888776
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=36.29 E-value=89 Score=38.66 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=30.7
Q ss_pred cEEEEEccCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Q 004203 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD 189 (768)
Q Consensus 152 V~sVafSP~dg~lLaSgS~DgtVrLWDl~sg~~i~~l~ 189 (768)
+.++...+ +..++++-+.|+++|+||+.+++++.+..
T Consensus 240 ~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455556 77899999999999999999999988754
No 363
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=35.61 E-value=23 Score=34.88 Aligned_cols=68 Identities=22% Similarity=0.377 Sum_probs=37.0
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (768)
|.++..+ .++||||+.. .+.+-+|.... .+.+.....+.|.+++. ..|+.|++.-
T Consensus 31 GsLI~~~~VLTAAHC~~~--------~~~v~~G~~~~-------~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (227)
T 1euf_A 31 GFLVREDFVLTAAHCLGS--------SINVTLGAHNI-------MERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLT 95 (227)
T ss_dssp EEEEETTEEEECGGGCCE--------EEEEEESCSBT-------TSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEeeCCEEEECHHHCCC--------CcEEEEccccc-------CCCCCccEEEEEEEEEeCCCCCCCCCcCceEEEEEC
Confidence 4555555 7899999964 13333444322 11222345566666654 2588888863
Q ss_pred cCCC--CceeeeEec
Q 004203 707 PSAE--DEVNVACFH 719 (768)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (768)
.... +.|.-+|.-
T Consensus 96 ~~~~~~~~v~picLp 110 (227)
T 1euf_A 96 RKADITDKVSPINLP 110 (227)
T ss_dssp SCCCCCSSCCCCCCC
T ss_pred CcCcCCCceeccCCC
Confidence 3322 345556653
No 364
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=35.55 E-value=26 Score=34.88 Aligned_cols=72 Identities=15% Similarity=0.252 Sum_probs=37.6
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (768)
|.++..+ .++||||+..- .....+.+-+|.... ...+....+++|.+++.- .|+.|++.-
T Consensus 28 GtLI~~~~VLTAAhC~~~~---~~~~~~~v~~g~~~~-------~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 97 (261)
T 3gyl_B 28 GSLVSEQWVLSAAHCFPSE---HHKEAYEVKLGAHQL-------DSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLS 97 (261)
T ss_dssp EEECSSSEEEECGGGSCTT---SCGGGEEEEESCSBT-------TSCCSSCEEECEEEEEECTTCCSTTCSCCCEEEEES
T ss_pred EEEEcCCEEEECHHHCCCC---CCcccEEEEeCceec-------cCCCCCceEEEEEEEEECCCcCCCCCCCcEEEEEEC
Confidence 5555555 78999998531 112233344444332 111223345566666543 388888863
Q ss_pred cCCC--CceeeeEe
Q 004203 707 PSAE--DEVNVACF 718 (768)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (768)
.... +.|.-+|.
T Consensus 98 ~~v~~~~~v~picL 111 (261)
T 3gyl_B 98 RPITFSRYIRPISL 111 (261)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CCccCCCceeccCC
Confidence 3322 34555665
No 365
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=33.79 E-value=26 Score=34.47 Aligned_cols=72 Identities=15% Similarity=0.393 Sum_probs=37.8
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEE-----------EecCcEEEE
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVY-----------RVSDMELVR 704 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 704 (768)
|.++..+ .++||||+... +..+.+.+-+|.....- .+.....+.|.+++ .-.|+.|++
T Consensus 33 GtLI~~~~VLTAAHC~~~~---~~~~~~~v~~g~~~~~~-------~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~ 102 (247)
T 3mhw_U 33 GSLISPCWVISATHCFIDY---PKKEDYIVYLGRSRLNS-------NTQGEMKFEVENLILHKDYSADTLAHHNDIALLK 102 (247)
T ss_dssp EEEEETTEEEECGGGTTTS---CCGGGEEEEESCCBSSS-------CCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEE
T ss_pred EEEEeCCEEEEcHHhCcCC---CCCccEEEEeccccccC-------CCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEE
Confidence 6666666 78999998642 12334445555433211 11122334455443 235888888
Q ss_pred eecC------CCCceeeeEe
Q 004203 705 VLPS------AEDEVNVACF 718 (768)
Q Consensus 705 ~~~~------~~~~~~~~~~ 718 (768)
.-.. ..+.|.-+|.
T Consensus 103 L~~~~~~~~~~~~~v~pi~l 122 (247)
T 3mhw_U 103 IRSKEGRCAQPSRTIQTISL 122 (247)
T ss_dssp EECTTSCCCCCBTTBCCCBC
T ss_pred eCCccccccccCCccccccc
Confidence 5322 2345666665
No 366
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=32.78 E-value=31 Score=33.66 Aligned_cols=72 Identities=19% Similarity=0.330 Sum_probs=35.3
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE--------ecCcEEEEeec
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR--------VSDMELVRVLP 707 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 707 (768)
|.++..+ .++||||+... .|. .+.+-+|..... ...+.....+.|.+++. ..|+.|++.-.
T Consensus 28 GtLI~~~~VLTAAHC~~~~--~~~--~~~V~~G~~~~~------~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~ 97 (225)
T 1a7s_A 28 GALIHARFVMTAASCFQSQ--NPG--VSTVVLGAYDLR------RRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDR 97 (225)
T ss_dssp EEEEETTEEEECGGGC------CC--SEEEEESCSSTT------SCCTTTCEEEEEEEEECSSCBTTTTBSCCEEEEESS
T ss_pred EEEeeCCEEEEchhccCCC--CCC--ceEEEEeeeECC------CCCCcceeEEeEEEEecccccCCCCcCCEEEEEcCC
Confidence 4555555 78999999762 232 333344433221 01111225566666654 25888888533
Q ss_pred CCC--CceeeeEe
Q 004203 708 SAE--DEVNVACF 718 (768)
Q Consensus 708 ~~~--~~~~~~~~ 718 (768)
... +.|..+|.
T Consensus 98 ~~~~~~~v~pi~L 110 (225)
T 1a7s_A 98 EANLTSSVTILPL 110 (225)
T ss_dssp CCCCBTTBCCCCC
T ss_pred cccCCCceeEEEc
Confidence 322 34555555
No 367
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=32.65 E-value=28 Score=33.78 Aligned_cols=68 Identities=21% Similarity=0.311 Sum_probs=36.5
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (768)
|.++..+ .++||||+. +.+.+-+|..... ..+.....+.|.+++.- .|+.|++.-
T Consensus 32 GtLI~~~~VLTAAhC~~--------~~~~v~~g~~~~~-------~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~ 96 (224)
T 3rp2_A 32 GFLISRQFVLTAAHCKG--------REITVILGAHDVR-------KRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLE 96 (224)
T ss_dssp EEESSSSEEEECGGGCC--------SEEEEEESCSBTT-------SCCTTCEEEEEEEEEECTTCCSSSCCSCCEEEEES
T ss_pred eEEeeCCEEEEchhcCC--------CCcEEEEeccccC-------cCCCCcEEEEEEEEEECCCccCCCCCccEEEEEcC
Confidence 5555555 789999973 2334444443321 11223345556665542 488888853
Q ss_pred cCCC--CceeeeEec
Q 004203 707 PSAE--DEVNVACFH 719 (768)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (768)
.... +.|+.+|..
T Consensus 97 ~~~~~~~~v~pi~l~ 111 (224)
T 3rp2_A 97 KKVELTPAVNVVPLP 111 (224)
T ss_dssp SCCCCBTTBCCCCCC
T ss_pred CCcccCCcccceecC
Confidence 3222 456666653
No 368
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=32.33 E-value=34 Score=33.71 Aligned_cols=73 Identities=19% Similarity=0.338 Sum_probs=38.8
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (768)
|.++..+ .++||||+... .....+.+-+|.... .+.+...+.+.|.+++.- .|+.|++.-
T Consensus 30 GtLIs~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~-------~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 99 (240)
T 1mza_A 30 GVLIDPQWVLTAAHCQYRF---TKGQSPTVVLGAHSL-------SKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQ 99 (240)
T ss_dssp EEEEETTEEEECGGGSCTT---CSCSCEEEEESCSBS-------SSCCTTCEEEEEEEEEECCCSSCSSSSSCCEEEEES
T ss_pred EEEecCCEEEECHHhCCCC---CCCCCeEEEeCceec-------CCCCCceEEEEEEEEEeCCCccCCCCCceEEEEEeC
Confidence 5556555 78999998532 112233444444332 111222345666666542 588888854
Q ss_pred cCCC--CceeeeEec
Q 004203 707 PSAE--DEVNVACFH 719 (768)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (768)
.... +.|..+|.-
T Consensus 100 ~~~~~~~~v~pi~l~ 114 (240)
T 1mza_A 100 TAAKLNKHVKMLHIR 114 (240)
T ss_dssp SCCCCBTTBCCCCBC
T ss_pred CCcccCCceeeeecC
Confidence 3332 356666664
No 369
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=31.55 E-value=29 Score=34.05 Aligned_cols=68 Identities=24% Similarity=0.330 Sum_probs=37.3
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (768)
|.++..+ .++||||+.. .+.+-+|..... ..+.....+.|.+++. -.|+.|++.-
T Consensus 31 GsLI~~~~VLTAAHC~~~--------~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (224)
T 1cgh_A 31 GFLVREDFVLTAAHCWGS--------NINVTLGAHNIQ-------RRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLS 95 (224)
T ss_dssp EEEEETTEEEECGGGCCS--------SEEEEESCSBTT-------SCCTTCEEEEEEEEEECTTCBTTTTBSCCEEEEES
T ss_pred EEEeeCCEEEEhHHhCCC--------CCEEEEeecccC-------CCCCccEEEEEEEEEcCCCCCCCCCcCCEEEEEEC
Confidence 4555555 7899999853 233344443221 1122335566666654 2488888853
Q ss_pred cCCC--CceeeeEec
Q 004203 707 PSAE--DEVNVACFH 719 (768)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (768)
.... +.|.-+|.-
T Consensus 96 ~~v~~~~~v~picLp 110 (224)
T 1cgh_A 96 RRVRRNRNVNPVALP 110 (224)
T ss_dssp SCCCCBTTBCCCBCC
T ss_pred CCCcCCCceEeeECC
Confidence 3332 356667763
No 370
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=30.99 E-value=36 Score=42.12 Aligned_cols=38 Identities=21% Similarity=0.362 Sum_probs=32.6
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEe
Q 004203 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH 146 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~ 146 (768)
.+.+++..++..++++-+.|+++|+||+.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45666777888999999999999999999999987754
No 371
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=30.87 E-value=18 Score=35.86 Aligned_cols=74 Identities=16% Similarity=0.178 Sum_probs=38.9
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---ecCcEEEEeecCCC--
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---VSDMELVRVLPSAE-- 710 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-- 710 (768)
|.++..+ .++||||+.... +. .+.+-+|.....- ...+....++.|.+++. -.|+.|++.-....
T Consensus 27 GtLIs~~~VLTAAHC~~~~~--~~--~~~v~~G~~~~~~-----~~~~~~~~~~~v~~~~~~p~~~DiALl~L~~~v~~~ 97 (240)
T 1si5_H 27 GSLIKESWVLTARQCFPSRD--LK--DYEAWLGIHDVHG-----RGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLD 97 (240)
T ss_dssp EEEEETTEEEEEGGGCSSSC--GG--GEEEEESCSBSSC-----STTTTTCEEEEEEEEEECSSTTCEEEEEESSCCCCS
T ss_pred EEEeeCCEEEEhHHhcCCCC--Cc--cEEEEEeeeecCC-----CCCCCcceEEEEEEEEcCCCCCcEEEEEECCccccC
Confidence 4445544 789999986532 22 3334444432210 11122344566666653 35899988643332
Q ss_pred CceeeeEec
Q 004203 711 DEVNVACFH 719 (768)
Q Consensus 711 ~~~~~~~~~ 719 (768)
+.|.-+|..
T Consensus 98 ~~v~picLp 106 (240)
T 1si5_H 98 DFVSTIDLP 106 (240)
T ss_dssp SSCCCCBCC
T ss_pred CceeccCcC
Confidence 356666663
No 372
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=30.09 E-value=5.9e+02 Score=29.82 Aligned_cols=143 Identities=12% Similarity=0.075 Sum_probs=76.2
Q ss_pred CCCeEEEEECCC-CCEEEEEeCCCeEEEEeCCCCeEEEEEecC-------CCCcEEEEEccCCCCEEEEEeCCCe----E
Q 004203 107 PRSTIAAAFSPD-GKTLASTHGDHTVKIIDCQTGSCLKVLHGH-------RRTPWVVRFHPLNPTIIASGSLDHE----V 174 (768)
Q Consensus 107 ~~~VtslafSPD-G~~LaSgS~DgtVrVWDl~tg~~l~~l~gH-------~g~V~sVafSP~dg~lLaSgS~Dgt----V 174 (768)
.+.|.+|+++|+ ...++.+...+.|...+ +.|+.-..+..+ ...+..|+++|.+.+.++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 457999999994 56777788778777776 445544444332 2358999999844455554443211 2
Q ss_pred EEE-ECCCCcEEEEecC--------C--CCeEEEEEcCCC-CEEEEEE-CCeEEEEEcCCCccccCCeEee------cCC
Q 004203 175 RLW-NASTAECIGSRDF--------Y--RPIASIAFHASG-ELLAVAS-GHKLYIWRYNMREETSSPRIVL------RTR 235 (768)
Q Consensus 175 rLW-Dl~sg~~i~~l~h--------~--~~V~svafSPDG-~~LatgS-dd~I~IWDl~t~~~~~~~~~l~------~h~ 235 (768)
.|| ....|+.-..... . ..+..++++|.. ..++.+. .+.| |--..+.... ..+. ...
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW--~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTW--TNVTSIPDAFTNG 168 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSC--EEETTSCCCCSTT
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCccc--CCCccCccccCCC
Confidence 333 3344544333221 1 135678888854 4555554 2333 3222222111 1111 112
Q ss_pred CCeEEEEEccCC-CeEEEEE
Q 004203 236 RSLRAVHFHPHA-APLLLTA 254 (768)
Q Consensus 236 ~~V~sVaFSPDG-~~LlaS~ 254 (768)
..+..|.++|.. ..++++.
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~ 188 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASA 188 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEE
T ss_pred CCeEEEEECCCCCCEEEEEE
Confidence 457889998853 3444443
No 373
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=29.84 E-value=30 Score=33.66 Aligned_cols=67 Identities=21% Similarity=0.372 Sum_probs=36.1
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (768)
|.++..+ .++||||+. +.+.+-+|.... .+.+.....+.|.+++.- .|+.|++.-
T Consensus 32 GtLI~~~~VLTAAhC~~--------~~~~v~~G~~~~-------~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~ 96 (226)
T 4ag1_A 32 GFLIRRNFVLTAAHCAG--------RSITVTLGAHNI-------TEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLK 96 (226)
T ss_dssp EEEEETTEEEECGGGCC--------SEEEEEESCSBT-------TSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEEeCCEEEECcccCC--------CCeEEEeCCccc-------CCCCCcceEEEEEEEEeCCCCCCCCCcCcEEEEEEC
Confidence 5555555 789999983 234444554332 112233345666666542 488888853
Q ss_pred cCC--CCceeeeEe
Q 004203 707 PSA--EDEVNVACF 718 (768)
Q Consensus 707 ~~~--~~~~~~~~~ 718 (768)
... .+.|..+|.
T Consensus 97 ~~~~~~~~v~pi~l 110 (226)
T 4ag1_A 97 EKASLTLAVGTLPF 110 (226)
T ss_dssp SCCCCCSSSCCCCC
T ss_pred CCCccCCceecccc
Confidence 222 234445554
No 374
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=29.34 E-value=37 Score=33.25 Aligned_cols=68 Identities=19% Similarity=0.313 Sum_probs=36.1
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (768)
|.++..+ .++||||+. ..+.+-+|...... .+.....+.|.+++. -.|+.|++.-
T Consensus 27 GsLIs~~~VLTAAHC~~--------~~~~v~~G~~~~~~-------~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 91 (222)
T 1hj8_A 27 GSLVNENWVVSAAHCYK--------SRVEVRLGEHNIKV-------TEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLS 91 (222)
T ss_dssp EEEEETTEEEECGGGCC--------SSCEEEESCSBTTS-------CCSCCEEEEEEEEEECTTCBTTTTBSCCEEEEES
T ss_pred eEEecCCEEEECHHhcC--------CCeEEEEccccccc-------CCCCcEEEEEEEEEECCCCCCCCCCCcEEEEEEC
Confidence 4555555 789999985 12233334332211 112234566777654 3588888853
Q ss_pred cCCC--CceeeeEec
Q 004203 707 PSAE--DEVNVACFH 719 (768)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (768)
.... +.|.-+|..
T Consensus 92 ~~~~~~~~v~picL~ 106 (222)
T 1hj8_A 92 KPATLNTYVQPVALP 106 (222)
T ss_dssp SCCCCSSSCCCCBCC
T ss_pred CcccCCCceeccCCC
Confidence 3322 346666663
No 375
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=29.33 E-value=47 Score=32.23 Aligned_cols=71 Identities=23% Similarity=0.426 Sum_probs=36.8
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE--------ecCcEEEEeec
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR--------VSDMELVRVLP 707 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 707 (768)
|.++..+ .++||||+.... + ..+.+-+|..... ..+.....+.|.+++. ..|+.|++.-.
T Consensus 31 GtLIs~~~VLTAAHC~~~~~--~--~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L~~ 99 (221)
T 1fuj_A 31 GTLIHPSFVLTAAHCLRDIP--Q--RLVNVVLGAHNVR-------TQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSS 99 (221)
T ss_dssp EEEEETTEEEECGGGGSSSC--G--GGEEEEESCSBTT-------SCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEESS
T ss_pred EEEecCCEEEEchHhcCcCC--C--CceEEEEeeeecc-------CCCCceEEEEEEEEEeCCCCCCCCcccEEEEEeCC
Confidence 4555555 889999996522 1 2333444433221 1122344556666654 25888888533
Q ss_pred CCC--CceeeeEe
Q 004203 708 SAE--DEVNVACF 718 (768)
Q Consensus 708 ~~~--~~~~~~~~ 718 (768)
... +.|.-+|.
T Consensus 100 ~~~~~~~v~picL 112 (221)
T 1fuj_A 100 PANLSASVATVQL 112 (221)
T ss_dssp CCCCCSSCCCCBC
T ss_pred ccccCCcceeeEC
Confidence 222 34555555
No 376
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=29.25 E-value=21 Score=35.28 Aligned_cols=70 Identities=23% Similarity=0.374 Sum_probs=38.0
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE-----------ecCcEEEE
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR-----------VSDMELVR 704 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 704 (768)
|.++..+ .++||||+.. + ..+.+-+|..... ..+...+.+.|.+++. -.|+.|++
T Consensus 32 GtLIs~~~VLTAAHC~~~----~--~~~~V~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiALl~ 98 (236)
T 1elt_A 32 GSLIRQGWVMTAAHCVDS----A--RTWRVVLGEHNLN-------TNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLR 98 (236)
T ss_dssp EEEEETTEEEECHHHHSS----C--CCEEEEESCSBTT-------SCCSCCEEECEEEEEECTTCCTTCGGGCCCCEEEE
T ss_pred EEEEeCCEEEECHHhhCC----c--CceEEEEccccCC-------CCCCCcEEEEEEEEEECCCCCCCCCCCCccEEEEE
Confidence 4555555 8899999864 2 2333444443321 1112234566666654 34888888
Q ss_pred eecCCC--CceeeeEec
Q 004203 705 VLPSAE--DEVNVACFH 719 (768)
Q Consensus 705 ~~~~~~--~~~~~~~~~ 719 (768)
.-.... +.|..+|.-
T Consensus 99 L~~~~~~~~~v~picL~ 115 (236)
T 1elt_A 99 LNTQASLNSAVQLAALP 115 (236)
T ss_dssp ESSCCCCSSSCCCCCCC
T ss_pred CCCCCccCCcEEeccCC
Confidence 643322 456667764
No 377
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=28.84 E-value=29 Score=34.19 Aligned_cols=17 Identities=29% Similarity=0.790 Sum_probs=12.1
Q ss_pred chhhhhh-HhhhccceeE
Q 004203 637 GTVLTSR-AIRAAHCLTS 653 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~ 653 (768)
|.++..+ .++||||+..
T Consensus 28 GsLIs~~~VLTAAHC~~~ 45 (237)
T 2zch_P 28 GVLVHPQWVLTAAHCIRN 45 (237)
T ss_dssp EEEEETTEEEECGGGCCS
T ss_pred EEEecCCEEEEcHHhcCC
Confidence 4555555 7899999853
No 378
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=28.10 E-value=31 Score=33.77 Aligned_cols=67 Identities=19% Similarity=0.286 Sum_probs=37.4
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (768)
|.++..+ .++||||+.. .+.+-+|..... +.+.....+.|.+++. -.|+.|++.-
T Consensus 31 GtLI~~~~VLTAAHC~~~--------~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (227)
T 1iau_A 31 GFLIRDDFVLTAAHCWGS--------SINVTLGAHNIK-------EQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLE 95 (227)
T ss_dssp EEEEETTEEEECGGGCCS--------EEEEEESCSBTT-------SCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEEcCCEEEECHHhCCC--------ceEEEEcccccc-------CCCCccEEEEEEEEECCCCCCCCCCCCCeEEEEEC
Confidence 5666665 8899999853 133444443321 1122345566776654 2488888853
Q ss_pred cCCC--CceeeeEe
Q 004203 707 PSAE--DEVNVACF 718 (768)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (768)
.... +.|.-+|.
T Consensus 96 ~~~~~~~~v~picL 109 (227)
T 1iau_A 96 RKAKRTRAVQPLRL 109 (227)
T ss_dssp SCCCCBTTBCCCCC
T ss_pred CcccCCCceecccC
Confidence 3322 34666665
No 379
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=28.00 E-value=37 Score=33.80 Aligned_cols=69 Identities=22% Similarity=0.475 Sum_probs=36.2
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (768)
|.++..+ .++||||+.. .... +-+|.-... ..+.....+.|.+++. -.|+.|++.-
T Consensus 44 GtLI~~~~VLTAAHC~~~-----~~~~--v~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 109 (245)
T 1t8o_A 44 GSLINENWVVTAAHCGVT-----TSDV--VVAGEFDQG-------SSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLS 109 (245)
T ss_dssp EEEEETTEEEECGGGCCC-----TTSE--EEESCSBTT-------CSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEES
T ss_pred EEEeeCCEEEEcHHhCcC-----CCcE--EEEeeeecC-------CCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEEC
Confidence 4555555 7899999864 2222 333432221 1122334566666654 2588888853
Q ss_pred cCCC--CceeeeEec
Q 004203 707 PSAE--DEVNVACFH 719 (768)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (768)
.... +.|.-+|.-
T Consensus 110 ~~~~~~~~v~picLp 124 (245)
T 1t8o_A 110 TAASFSQTVSAVCLP 124 (245)
T ss_dssp SCCCCBTTBCCCBCC
T ss_pred CCCcCCCceeeeECC
Confidence 3322 356666653
No 380
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=27.97 E-value=34 Score=33.80 Aligned_cols=69 Identities=19% Similarity=0.309 Sum_probs=36.4
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE-----------ecCcEEEE
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR-----------VSDMELVR 704 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 704 (768)
|.++..+ .++||||+.. + ..+.+-+|.-... ..+...+.+.|.+++. -.|+.|++
T Consensus 32 GsLI~~~~VLTAAHC~~~----~--~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~ 98 (240)
T 1gvk_B 32 GTLIRQNWVMTAAHCVDR----E--LTFRVVVGEHNLN-------QNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLR 98 (240)
T ss_dssp EEEEETTEEEECGGGGCS----C--CCEEEEESCSBTT-------SCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEEEE
T ss_pred EEEeeCCEEEECHHHCCC----C--cceEEEECCeecc-------cCCCcceEEEEEEEEECCCCCCCCCCCCCcEEEEE
Confidence 4555555 7899999854 2 2233334433221 1112234566666654 34888888
Q ss_pred eecCCC--CceeeeEe
Q 004203 705 VLPSAE--DEVNVACF 718 (768)
Q Consensus 705 ~~~~~~--~~~~~~~~ 718 (768)
.-.... +.|.-+|.
T Consensus 99 L~~~v~~~~~v~pi~l 114 (240)
T 1gvk_B 99 LAQSVTLNSYVQLGVL 114 (240)
T ss_dssp ESSCCCCBTTBCCCCC
T ss_pred ECCccccCCCccceec
Confidence 633332 34555665
No 381
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=27.93 E-value=26 Score=34.55 Aligned_cols=69 Identities=17% Similarity=0.328 Sum_probs=36.5
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (768)
|.++..+ .++||||+.. ..-.+. +|.... ...+...+++.|.+++. -.|+.|++.-
T Consensus 28 GtLIs~~~VLTAAHC~~~-----~~~~v~--~G~~~~-------~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~ 93 (234)
T 1orf_A 28 GALIAKDWVLTAAHCNLN-----KRSQVI--LGAHSI-------TREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLT 93 (234)
T ss_dssp EEEEETTEEEECTTCCCC-----TTCEEE--ESCSBS-------SSCCTTCEEECEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEeeCCEEEEchhcCCC-----CCceEE--Eecccc-------CcCCCceEEEEEEEEEcCCCCCCCCCCCCEEEEEEC
Confidence 5555555 7899999863 222333 343221 11122234566666654 2588888864
Q ss_pred cCCC--CceeeeEec
Q 004203 707 PSAE--DEVNVACFH 719 (768)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (768)
.... +.|..+|.-
T Consensus 94 ~~~~~~~~v~picLp 108 (234)
T 1orf_A 94 EKAKINKYVTILHLP 108 (234)
T ss_dssp SCCCCSSSSCCCCCC
T ss_pred CcCccCCCeeeeecC
Confidence 3332 345566653
No 382
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=27.67 E-value=21 Score=35.18 Aligned_cols=71 Identities=21% Similarity=0.403 Sum_probs=38.4
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (768)
|.++..+ .++||||+... .| ..+.+-+|..... ..+.....+.|.+++. -.|+.|++.-
T Consensus 30 GtLIs~~~VLTAAHC~~~~--~~--~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 98 (238)
T 1ym0_A 30 GSIINDRWVVCAAHCMQGE--AP--ALVSLVVGEHDSS-------AASTVRQTHDVDSIFVNENYDPATLENDVSVIKTA 98 (238)
T ss_dssp EEEEETTEEEECHHHHTTC--CG--GGEEEEESCSBTT-------SCCSSCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEeeCCEEEECHHhCCCC--CC--ceEEEEEcccccC-------CCCCCceEEEEEEEEECCCCCCCCCcccEEEEEeC
Confidence 5555555 78999998654 23 3344445543321 1122345666777664 2588888853
Q ss_pred cCCC--CceeeeEe
Q 004203 707 PSAE--DEVNVACF 718 (768)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (768)
.... +.|.-+|.
T Consensus 99 ~~~~~~~~v~picL 112 (238)
T 1ym0_A 99 VAITFDINVGPICA 112 (238)
T ss_dssp SCCCCSSSCCCCBC
T ss_pred CCccccCcccccCC
Confidence 2222 34555565
No 383
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=27.63 E-value=42 Score=32.74 Aligned_cols=71 Identities=20% Similarity=0.319 Sum_probs=36.8
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (768)
|.++..+ .++||||+... .|. .+.+-+|.... ...+.....+.|.+++.- .|+.|++.-
T Consensus 28 GtLIs~~~VLTAAHC~~~~--~~~--~~~v~~G~~~~-------~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~ 96 (228)
T 2xw9_A 28 GVLVAEQWVLSAAHCLEDA--ADG--KVQVLLGAHSL-------SQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLS 96 (228)
T ss_dssp EEEEETTEEEECGGGGSSC--TTC--CEEEEESCSBS-------SSCCTTCEEEEEEEEEECTTCCTTCCTTCCEEEEES
T ss_pred EEEEeCCEEEEcHHhCCCC--CCC--ceEEEEccccc-------CCCCCcceEEEEEEEEeCCCCCCCCCCCcEEEEEeC
Confidence 4555555 78999998632 222 33444444322 111222345666666542 478888853
Q ss_pred cCCC--CceeeeEe
Q 004203 707 PSAE--DEVNVACF 718 (768)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (768)
.... +.|.-+|.
T Consensus 97 ~~~~~~~~v~pi~l 110 (228)
T 2xw9_A 97 EKATLGPAVRPLPW 110 (228)
T ss_dssp SCCCCBTTBCCCCB
T ss_pred CCcccCCCeeeccc
Confidence 3332 34555554
No 384
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=27.51 E-value=49 Score=32.12 Aligned_cols=67 Identities=18% Similarity=0.323 Sum_probs=35.7
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (768)
|.++..+ .++||||+.. .+.+-+|..... ..+....++.|.+++.- .|+.|++.-
T Consensus 32 GtLI~~~~VLTAAHC~~~--------~~~v~~G~~~~~-------~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~ 96 (227)
T 3fzz_A 32 GFLVRDKFVLTAAHCKGR--------SMTVTLGAHNIK-------AKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLV 96 (227)
T ss_dssp EEEEETTEEEECTTCCCE--------EEEEEESCSBTT-------SCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEES
T ss_pred EEEEeCCEEEECcccCCC--------CcEEEEcccccC-------CCCCCceEEEEEEEEECcCCCCCCCcCCEEEEEEC
Confidence 5566655 7899999732 233334433221 11222345666666542 488888863
Q ss_pred cCCC--CceeeeEe
Q 004203 707 PSAE--DEVNVACF 718 (768)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (768)
.... +.|.-+|.
T Consensus 97 ~~~~~~~~v~picL 110 (227)
T 3fzz_A 97 RNAKRTRAVRPLNL 110 (227)
T ss_dssp SCCCCBTTBCCCCC
T ss_pred CcCCCCCcccccCC
Confidence 3332 34555665
No 385
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=27.49 E-value=24 Score=34.77 Aligned_cols=16 Identities=38% Similarity=0.781 Sum_probs=11.6
Q ss_pred chhhhhh-Hhhhcccee
Q 004203 637 GTVLTSR-AIRAAHCLT 652 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~ 652 (768)
|.++..+ .++||||+.
T Consensus 28 GtLI~~~~VLTAAHC~~ 44 (237)
T 1ao5_A 28 GVLLDRNWVLTAAHCYV 44 (237)
T ss_dssp EEEEETTEEEECTTCCC
T ss_pred EEEeeCCEEEECHHHCC
Confidence 4555555 789999985
No 386
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=27.24 E-value=45 Score=33.19 Aligned_cols=70 Identities=23% Similarity=0.513 Sum_probs=36.4
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (768)
|.++..+ .++||||+. .+..-.+. +|...... +.+.....+.|.+++. -.|+.|++.-
T Consensus 45 GtLIs~~~VLTAAHC~~----~~~~~~V~--~G~~~~~~------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 112 (251)
T 1pyt_D 45 GTLITPNHVLTAAHCIS----NTLTYRVA--LGKNNLEV------EDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLA 112 (251)
T ss_dssp EEEEETTEEEECGGGCC----TTCCEEEE--ESCSBTTC------SCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEES
T ss_pred eEEecCCEEEECHHHhC----CCceEEEE--Eccccccc------CCCCCcEEEEEEEEEECCCCCCCCCCCCEEEEEEC
Confidence 4555555 789999986 23333333 34332211 1122233455666653 3588888853
Q ss_pred cCCC--CceeeeEe
Q 004203 707 PSAE--DEVNVACF 718 (768)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (768)
.... +.|..+|.
T Consensus 113 ~~v~~~~~v~picL 126 (251)
T 1pyt_D 113 ETVELGDTIQVACL 126 (251)
T ss_dssp SCCCCCSSCCCCBC
T ss_pred CCcccCCCeeeeEc
Confidence 3322 35666665
No 387
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=26.24 E-value=20 Score=35.17 Aligned_cols=74 Identities=18% Similarity=0.241 Sum_probs=38.7
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (768)
|.++..+ .++||||+..-...|..-.+.++ ....+-. .+.....+.|.+++.- .|+.|++.-
T Consensus 28 GtLI~~~~VLTAAHC~~~~~~~~~~~~v~~g--~~~~~~~------~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~ 99 (235)
T 4dgj_A 28 ASLVSSDWLVSAAHCVYGRNLEPSKWTAILG--LHMKSNL------TSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLE 99 (235)
T ss_dssp EEECSSSEEEECHHHHTTSCSSGGGEEEEES--CCBTTCC------SCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEES
T ss_pred EEEeeCCEEEECHHhcCCCCCCCccEEEEEe--eeccccc------CCCceeEEeEEEEEECCCCCCCCCCCeEEEEEEC
Confidence 5555555 78999999654444544444444 3222111 1122234556666543 488888853
Q ss_pred cCCC--CceeeeEe
Q 004203 707 PSAE--DEVNVACF 718 (768)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (768)
.... +.|.-+|.
T Consensus 100 ~~~~~~~~v~picL 113 (235)
T 4dgj_A 100 FKVNYTDYIQPISL 113 (235)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CccccCCcccccCC
Confidence 2222 34566665
No 388
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=26.19 E-value=32 Score=34.31 Aligned_cols=72 Identities=25% Similarity=0.432 Sum_probs=39.3
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (768)
|.++..+ .++||||+.... ....+.+-+|.-... ..+.....+.|.+++.- .|+.|++.-
T Consensus 28 GtLIs~~~VLTAAHC~~~~~---~~~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 97 (254)
T 2bz6_H 28 GTLINTIWVVSAAHCFDKIK---NWRNLIAVLGEHDLS-------EHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLH 97 (254)
T ss_dssp EEECSSSEEEECGGGGTTCS---CGGGEEEEESCCBTT-------CCCSCCEEEEEEEEEEETTCCTTSCSSCCEEEEES
T ss_pred EEEecCCEEEECHHHcCCCC---CcceEEEEECCcccC-------CCCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEEC
Confidence 4555555 789999986422 113345555543321 11122345666666542 588998864
Q ss_pred cCCC--CceeeeEe
Q 004203 707 PSAE--DEVNVACF 718 (768)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (768)
.... +.|.-+|.
T Consensus 98 ~~v~~~~~v~picL 111 (254)
T 2bz6_H 98 QPVVLTDHVVPLCL 111 (254)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CccccCCCccceEC
Confidence 3332 45666666
No 389
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=26.06 E-value=36 Score=34.34 Aligned_cols=72 Identities=17% Similarity=0.432 Sum_probs=37.1
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE-----------ecCcEEEE
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR-----------VSDMELVR 704 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 704 (768)
|.++..+ .++||||+... +..+.+.+-+|.....- .+.....+.|.+++. -.|+.|++
T Consensus 56 GtLI~~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~~~-------~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~ 125 (276)
T 2jde_A 56 GSLMSPCWVISATHCFIDY---PKKEDYIVYLGRSRLNS-------NTQGEMKFEVENLILHKDYSADTLAHHNDIALLK 125 (276)
T ss_dssp EEEEETTEEEECGGGTTTS---CCGGGEEEEESCCBSSS-------CCTTCEEEEEEEEEECTTCEECSSCEESCCEEEE
T ss_pred eEEeeCCEEEEcHHhccCC---CCcccEEEEecccccCC-------CCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEE
Confidence 5666666 78999998642 12233444455433211 111223445555432 25888888
Q ss_pred eecC------CCCceeeeEe
Q 004203 705 VLPS------AEDEVNVACF 718 (768)
Q Consensus 705 ~~~~------~~~~~~~~~~ 718 (768)
.-.. -.+.|.-+|.
T Consensus 126 L~~~~~~~~~~~~~v~picL 145 (276)
T 2jde_A 126 IRSKEGRCAQPSRTIQTICL 145 (276)
T ss_dssp EECTTSCCCCCBTTBCCCBC
T ss_pred eCCccccccccCCceEccCC
Confidence 5322 2345666665
No 390
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=25.68 E-value=38 Score=33.69 Aligned_cols=72 Identities=25% Similarity=0.488 Sum_probs=37.3
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---cCcEEEEeecCCC--
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---SDMELVRVLPSAE-- 710 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-- 710 (768)
|.++..+ .++||||+.... .|. .+.+-+|.... .+.+.....+.|.++|.- .|+.|++.-....
T Consensus 46 GsLIs~~~VLTAAHC~~~~~-~~~--~~~v~~G~~~~-------~~~~~~~~~~~v~~~~~hp~~~DIALl~L~~~v~~~ 115 (247)
T 1ddj_A 46 GTLISPEWVLTAAHCLEKSP-RPS--SYKVILGAHQE-------VNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVIT 115 (247)
T ss_dssp EEEEETTEEEECGGGGTTCS-CGG--GCEEEESCSBS-------SSCCTTCEEEEEEEEEECTTSCSCEEEEESSCCCCC
T ss_pred EEEeeCCEEEEcHHHcCCCC-CCc--cEEEEEccccc-------CccCCceEEEEeeeEEcCCCCCcEEEEEeCCceeeC
Confidence 4555555 789999986421 222 23333443322 111223445566676653 5888888533322
Q ss_pred CceeeeEe
Q 004203 711 DEVNVACF 718 (768)
Q Consensus 711 ~~~~~~~~ 718 (768)
+.|.-+|.
T Consensus 116 ~~v~picL 123 (247)
T 1ddj_A 116 DKVIPACL 123 (247)
T ss_dssp SSCCCCBC
T ss_pred CCEEeeec
Confidence 34555565
No 391
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=25.26 E-value=50 Score=32.64 Aligned_cols=70 Identities=21% Similarity=0.454 Sum_probs=37.1
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe-----------cCcEEEE
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV-----------SDMELVR 704 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 704 (768)
|.++..+ .++||||+. .+ ..+-+-+|..... ..+.....+.|.+++.- .|+.|++
T Consensus 32 GtLI~~~~VLTAAHC~~----~~--~~~~V~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~ 98 (241)
T 1bru_P 32 GTLVDQSWVLTAAHCIS----SS--RTYRVVLGRHSLS-------TNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLK 98 (241)
T ss_dssp EEEEETTEEEECGGGCC----TT--SCEEEEESCSBSS-------SCCTTCEEEEEEEEEECTTCCTTCGGGCCCCEEEE
T ss_pred eEEeeCCEEEEcHHhcc----cC--CceEEEEEccccc-------CCCCccEEEEEEEEEECCCCCCCCCCCCCcEEEEE
Confidence 5555555 889999986 23 2233334433221 11222345666666531 5888888
Q ss_pred eecCCC--CceeeeEec
Q 004203 705 VLPSAE--DEVNVACFH 719 (768)
Q Consensus 705 ~~~~~~--~~~~~~~~~ 719 (768)
.-.... +.|.-+|.-
T Consensus 99 L~~~v~~~~~v~picLp 115 (241)
T 1bru_P 99 LASPVSLTDKIQLGCLP 115 (241)
T ss_dssp ESSCCCCCSSCCCCBCC
T ss_pred eCCCcccCCccCCcccC
Confidence 533322 346666653
No 392
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=25.12 E-value=1.7e+02 Score=33.74 Aligned_cols=58 Identities=21% Similarity=0.253 Sum_probs=42.1
Q ss_pred CeEEEEECCCCCEEEEEeCC------------CeEEEEeCCCCeEEEEEecCC-CCcEEEEEccCCCCEEEE
Q 004203 109 STIAAAFSPDGKTLASTHGD------------HTVKIIDCQTGSCLKVLHGHR-RTPWVVRFHPLNPTIIAS 167 (768)
Q Consensus 109 ~VtslafSPDG~~LaSgS~D------------gtVrVWDl~tg~~l~~l~gH~-g~V~sVafSP~dg~lLaS 167 (768)
..--|+|+|+|++++.-..+ ..+.+.+..+++....+.++. ..++.++|+| |++.|+.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp-Dg~tlfv 547 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC-CCCEEEE
Confidence 34678999999977755432 346777888888877777764 5788999999 6665544
No 393
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=24.99 E-value=35 Score=33.13 Aligned_cols=67 Identities=19% Similarity=0.359 Sum_probs=35.3
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (768)
|.++..+ .++||||+.+ .+.+-+|...... . +.....+.+.+++.- .|+.|++.-
T Consensus 27 GtLI~~~~VLTAAhC~~~--------~~~v~~g~~~~~~-----~--~~~~~~~~v~~~~~hp~y~~~~~~~DIAll~L~ 91 (223)
T 4i8h_A 27 GSLINSQWVVSAAHCYKS--------GIQVRLGEDNINV-----V--EGNEQFISASKSIVHPSYNSNTLNNDIMLIKLK 91 (223)
T ss_dssp EEECSSSEEEECGGGCCS--------SCEEEESCSSTTS-----C--CSCCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEEcCCEEEecHHhCCC--------CcEEEEccccccc-----c--CCCcEEEEEeEEEECcCCCCCCCcCCEEEEEEC
Confidence 6666655 7799999852 2333334333211 1 112234566666653 488888853
Q ss_pred cCCC--CceeeeEe
Q 004203 707 PSAE--DEVNVACF 718 (768)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (768)
.... +.|.-+|.
T Consensus 92 ~~~~~~~~v~pi~l 105 (223)
T 4i8h_A 92 SAASLNSRVASISL 105 (223)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CcCcCCCceeceEC
Confidence 3222 34555555
No 394
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=24.89 E-value=2.3e+02 Score=32.62 Aligned_cols=60 Identities=20% Similarity=0.277 Sum_probs=43.4
Q ss_pred CCeEEEEECCCCCEEEEEeC------------CCeEEEEeCCCCeEEEEEecC-CCCcEEEEEccCCCCEEEEE
Q 004203 108 RSTIAAAFSPDGKTLASTHG------------DHTVKIIDCQTGSCLKVLHGH-RRTPWVVRFHPLNPTIIASG 168 (768)
Q Consensus 108 ~~VtslafSPDG~~LaSgS~------------DgtVrVWDl~tg~~l~~l~gH-~g~V~sVafSP~dg~lLaSg 168 (768)
.....|.|+++|.+.+.... ...|..++..+++....+.+. ...++.++|+| |++.|+..
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSP-D~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECC-CCCEEEEE
Confidence 45789999999987774322 226888888889877777654 35689999999 66655543
No 395
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=24.75 E-value=47 Score=32.67 Aligned_cols=74 Identities=22% Similarity=0.363 Sum_probs=39.2
Q ss_pred chhhhhh-HhhhccceeEEEe-ccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEe
Q 004203 637 GTVLTSR-AIRAAHCLTSIQF-SPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRV 705 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 705 (768)
|.++..+ .++||||+..... .|. .+.+-+|...... .+...+.+.|.+++.- .|+.|++.
T Consensus 32 GtLIs~~~VLTAAHC~~~~~~~~~~--~~~v~~G~~~~~~-------~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L 102 (237)
T 2f91_A 32 ASIYNENYAITAGHCVYGDDYENPS--GLQIVAGELDMSV-------NEGSEQIITVSKIILHENFDYNLLDNDISLLKL 102 (237)
T ss_dssp EEEEETTEEEECGGGTTTSCTTSCC--SEEEEESCSBTTS-------CCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEE
T ss_pred EEEeeCCEEEEcHHhCCCCccCCcc--cEEEEECCeeccC-------CCCccEEEEEEEEEECCCCCCCCCCCcEEEEEE
Confidence 5556555 8899999864321 222 3344445433211 1222345667776542 58888885
Q ss_pred ecCCC--CceeeeEec
Q 004203 706 LPSAE--DEVNVACFH 719 (768)
Q Consensus 706 ~~~~~--~~~~~~~~~ 719 (768)
-.... +.|.-+|.-
T Consensus 103 ~~~v~~~~~v~picLp 118 (237)
T 2f91_A 103 SGSLTFNDNVAPIALP 118 (237)
T ss_dssp SSCCCCBTTBCCCBCC
T ss_pred CCCcccCCceeeccCC
Confidence 33222 345556653
No 396
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=24.64 E-value=37 Score=33.18 Aligned_cols=69 Identities=17% Similarity=0.302 Sum_probs=37.2
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE-------ecCcEEEEeecC
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR-------VSDMELVRVLPS 708 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 708 (768)
|.++..+ .++||||+... .+ ..+.+-+|.... ......+.|.+++. -.|+.|++.-..
T Consensus 28 GtLI~~~~VLTAAHC~~~~--~~--~~~~v~~G~~~~----------~~~~~~~~v~~i~~hp~y~~~~~DiALl~L~~~ 93 (224)
T 1pq7_A 28 GSLLNANTVLTAAHCVSGY--AQ--SGFQIRAGSLSR----------TSGGITSSLSSVRVHPSYSGNNNDLAILKLSTS 93 (224)
T ss_dssp EEEEETTEEEECHHHHTTS--CG--GGEEEEESCSBS----------SSSSEEECEEEEEECTTCBTTBTCCEEEEESSC
T ss_pred EEEecCCEEEEcHHccCCC--CC--CceEEEeCccee----------cCCCEEEEEEEEEECCCCCCCCCCEEEEEeCCC
Confidence 4455554 78999998642 12 233444444322 11123455666554 358899886433
Q ss_pred CC--CceeeeEec
Q 004203 709 AE--DEVNVACFH 719 (768)
Q Consensus 709 ~~--~~~~~~~~~ 719 (768)
.. +.|..+|.-
T Consensus 94 ~~~~~~v~picL~ 106 (224)
T 1pq7_A 94 IPSGGNIGYARLA 106 (224)
T ss_dssp CCCBTTBCCCCBC
T ss_pred CcCCCcccceecC
Confidence 32 356667764
No 397
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=24.62 E-value=33 Score=33.42 Aligned_cols=72 Identities=21% Similarity=0.416 Sum_probs=38.8
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE--------ecCcEEEEeec
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR--------VSDMELVRVLP 707 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 707 (768)
|.++..+ .++||||+... .+ ..+.+-+|..... ..+.....+.|.+++. -.|+.|++.-.
T Consensus 28 GtLI~~~~VLTAAHC~~~~--~~--~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~ 96 (218)
T 2z7f_E 28 ATLIAPNFVMSAAHCVANV--NV--RAVRVVLGAHNLS-------RREPTRQVFAVQRIFENGYDPVNLLNDIVILQLNG 96 (218)
T ss_dssp EEEEETTEEEECHHHHTTS--CG--GGCEEEESCSBTT-------SCCTTCEEEEEEEEEESCCBTTTTBSCCEEEEESS
T ss_pred EEEccCCEEEEcHHhcCCC--Cc--CcEEEEEeceecC-------CCCCceEEEEEEEEEccCCCCCCCCCCEEEEEECC
Confidence 4555555 78999999642 22 2334444443221 1122234566666654 25888988643
Q ss_pred CCC--CceeeeEec
Q 004203 708 SAE--DEVNVACFH 719 (768)
Q Consensus 708 ~~~--~~~~~~~~~ 719 (768)
... +.|.-+|.-
T Consensus 97 ~~~~~~~v~picL~ 110 (218)
T 2z7f_E 97 SATINANVQVAQLP 110 (218)
T ss_dssp CCCCSSSCCCCCCC
T ss_pred cCcCCCceeccCcC
Confidence 332 356666663
No 398
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=24.37 E-value=39 Score=33.20 Aligned_cols=16 Identities=31% Similarity=0.831 Sum_probs=11.7
Q ss_pred chhhhhh-Hhhhcccee
Q 004203 637 GTVLTSR-AIRAAHCLT 652 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~ 652 (768)
|.++..+ .++||||+.
T Consensus 28 GsLIs~~~VLTAAHC~~ 44 (238)
T 1spj_A 28 GILVHRQWVLTAAHCIS 44 (238)
T ss_dssp EEEEETTEEEECGGGCC
T ss_pred EEEecCCEEEEcHHhCC
Confidence 4555555 789999985
No 399
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=24.35 E-value=1e+02 Score=36.53 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=29.9
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCCeEEEEEec
Q 004203 110 TIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (768)
Q Consensus 110 VtslafSPDG~~LaSgS~DgtVrVWDl~tg~~l~~l~g 147 (768)
|.++.+ +..++++-+.|+++|+||+++++++....-
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 555555 478999999999999999999998877654
No 400
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=23.94 E-value=28 Score=28.45 Aligned_cols=16 Identities=31% Similarity=0.775 Sum_probs=11.4
Q ss_pred chhhhhh-Hhhhcccee
Q 004203 637 GTVLTSR-AIRAAHCLT 652 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~ 652 (768)
|.++..+ .++||||+.
T Consensus 28 GslIs~~~VLTAAHC~~ 44 (80)
T 2pka_A 28 GVLVNPKWVLTAAHCKN 44 (80)
T ss_dssp EEEEETTEEEECGGGCC
T ss_pred EEEEcCCEEEECHHHCC
Confidence 4445444 789999985
No 401
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=23.73 E-value=39 Score=33.06 Aligned_cols=16 Identities=31% Similarity=0.669 Sum_probs=11.9
Q ss_pred chhhhhh-Hhhhcccee
Q 004203 637 GTVLTSR-AIRAAHCLT 652 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~ 652 (768)
|.++..+ .++||||+.
T Consensus 28 GtLIs~~~VLTAAHC~~ 44 (223)
T 1lo6_A 28 GVLIHPLWVLTAAHCKK 44 (223)
T ss_dssp EEEEETTEEEECGGGCC
T ss_pred eEEecCCEEEECccCCC
Confidence 5555555 789999975
No 402
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=23.39 E-value=38 Score=33.55 Aligned_cols=74 Identities=22% Similarity=0.417 Sum_probs=39.7
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (768)
|.++..+ .++||||+... +.| ..+.+-+|..... ..+.....+.|.+++. -.|+.|++.-
T Consensus 34 GtLI~~~~VLTAAHC~~~~-~~~--~~~~V~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 103 (252)
T 1rtf_B 34 GILISSCWILSAAHCFQER-FPP--HHLTVILGRTYRV-------VPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLK 103 (252)
T ss_dssp EEECSSSEEEECGGGGTTC-CCG--GGEEEEESCSBSS-------SCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEEC
T ss_pred EEEEeCCEEEECHHHCCCC-CCc--ccEEEEeCccccc-------CCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEEC
Confidence 4555555 78999998542 223 3344444543321 1122234566777654 2588998853
Q ss_pred cC------CCCceeeeEecc
Q 004203 707 PS------AEDEVNVACFHP 720 (768)
Q Consensus 707 ~~------~~~~~~~~~~~~ 720 (768)
.. -.+.|.-+|.-+
T Consensus 104 ~~~~~~~~~~~~v~picLp~ 123 (252)
T 1rtf_B 104 SDSSRCAQESSVVRTVCLPP 123 (252)
T ss_dssp CSSSCCSCCBTTBCCCBCCC
T ss_pred CccccccccCCceeceeCCC
Confidence 22 124566777643
No 403
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=22.95 E-value=46 Score=32.58 Aligned_cols=75 Identities=16% Similarity=0.233 Sum_probs=39.4
Q ss_pred chhhhhh-HhhhccceeEE---EeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEE
Q 004203 637 GTVLTSR-AIRAAHCLTSI---QFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELV 703 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 703 (768)
|.++..+ .++||||+..- .+.+ ...+.+-+|....+. ..+.....++|.+++.- .|+.|+
T Consensus 29 GtLI~~~~VLTAAhC~~~~~~~~~~~-~~~~~v~~G~~~~~~------~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl 101 (241)
T 3ncl_A 29 ASLISPNWLVSAAHCYIDDRGFRYSD-PTQWTAFLGLHDQSQ------RSAPGVQERRLKRIISHPFFNDFTFDYDIALL 101 (241)
T ss_dssp EEECSSSEEEECGGGGCCBTTBCTTC-GGGEEEEESCSBTTC------TTSTTCEEEEEEEEEECTTCCTTTCTTCCEEE
T ss_pred EEEeeCCEEEEcHHhcccCCCccccC-CceEEEEEecccccc------CCCCCceEEEEEEEEECCCCCCCCCCCcEEEE
Confidence 5555555 78999998643 1111 122333344433211 11223456677777653 488888
Q ss_pred EeecCC--CCceeeeEe
Q 004203 704 RVLPSA--EDEVNVACF 718 (768)
Q Consensus 704 ~~~~~~--~~~~~~~~~ 718 (768)
+.-... .+.|.-+|.
T Consensus 102 ~L~~~~~~~~~v~picl 118 (241)
T 3ncl_A 102 ELEKPAEYSSMVRPISL 118 (241)
T ss_dssp EESSCCCCCSSCCCCBC
T ss_pred EECCCCcccCccCceEc
Confidence 853322 235666675
No 404
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=22.66 E-value=41 Score=32.63 Aligned_cols=69 Identities=16% Similarity=0.337 Sum_probs=37.9
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE--------ecCcEEEEeec
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR--------VSDMELVRVLP 707 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 707 (768)
|.++..+ .++||||+.. .....+.+-+|..... +++ ..+.+.+++. -.|+.|++.-.
T Consensus 28 GtLIs~~~VLTAAHC~~~----~~~~~~~v~~G~~~~~-------~~~---~~~~v~~i~~h~y~~~~~~~DiAll~L~~ 93 (235)
T 3h7t_A 28 GSILTANFVITAAQCVDG----TKPSDISIHYGSSYRT-------TKG---TSVMAKKIYIVRYHPLTMQNNYAVIETEM 93 (235)
T ss_dssp EEESSSSEEEECHHHHTT----CCGGGEEEEESCSBSS-------SSS---EEEEEEEEEECSCBTTTTBTCCEEEEESS
T ss_pred EEEeeCCEEEECHHHCCC----CCCCeeEEEcCccccc-------cCC---ceeeeeeEEeeecCCCCCCCCeEEEEecc
Confidence 5555555 7899999962 2233455555654431 222 4455666653 25888887532
Q ss_pred CCC--C-ceeeeEec
Q 004203 708 SAE--D-EVNVACFH 719 (768)
Q Consensus 708 ~~~--~-~~~~~~~~ 719 (768)
... + .|.-+|.-
T Consensus 94 ~v~~~~~~v~pi~Lp 108 (235)
T 3h7t_A 94 PIKLDDKTTKKIELP 108 (235)
T ss_dssp CCCCCSSSCCCCBCC
T ss_pred ccccCCccccceecC
Confidence 221 1 45556653
No 405
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=22.65 E-value=42 Score=32.95 Aligned_cols=16 Identities=38% Similarity=0.814 Sum_probs=11.5
Q ss_pred chhhhhh-Hhhhcccee
Q 004203 637 GTVLTSR-AIRAAHCLT 652 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~ 652 (768)
|.++..+ .++||||+.
T Consensus 26 GsLIs~~~VLTAAHC~~ 42 (235)
T 1ton_A 26 GVLIDPSWVITAAHCYS 42 (235)
T ss_dssp EEEEETTEEEECGGGCC
T ss_pred EEEecCCEEEEcHHhCC
Confidence 4555555 789999984
No 406
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=22.32 E-value=25 Score=34.54 Aligned_cols=70 Identities=16% Similarity=0.300 Sum_probs=35.0
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (768)
|.++..+ .++||||+.. +. .+.+-+|..... ..+.....+.+.+++. -.|+.|++.-
T Consensus 28 GtLI~~~~VLTAAHC~~~----~~--~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~ 94 (226)
T 1azz_A 28 GSLISPEWILTAAHCMDG----AG--FVDVVLGAHNIR-------EDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLP 94 (226)
T ss_dssp EEEEETTEEEECHHHHTT----CS--CEEEEESCSBSS-------SCCTTCEEEEECCEEECTTCBTTTTBSCCEEEECS
T ss_pred EEEecCCEEEEhHHhcCC----CC--ceEEEEcceEcC-------CCCCccEEEEEEEEEECCCCCCCCCCCceEEEEEC
Confidence 4555555 8899999863 22 233444443221 1111223444554433 3588888853
Q ss_pred cCCC--CceeeeEec
Q 004203 707 PSAE--DEVNVACFH 719 (768)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (768)
.... +.|.-+|.-
T Consensus 95 ~~~~~~~~v~picL~ 109 (226)
T 1azz_A 95 VPVTLTAAIATVGLP 109 (226)
T ss_dssp SCCCCCSSSCCCBCC
T ss_pred CccccCCCcccccCC
Confidence 2222 345556653
No 407
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=22.28 E-value=6.6e+02 Score=25.95 Aligned_cols=143 Identities=8% Similarity=-0.024 Sum_probs=74.3
Q ss_pred CeEEEEECC-C-CCEEEEEeCCCeEEEEeCCCCeEEEEEec-------------------CCCCcEEEEEccCCCCEEEE
Q 004203 109 STIAAAFSP-D-GKTLASTHGDHTVKIIDCQTGSCLKVLHG-------------------HRRTPWVVRFHPLNPTIIAS 167 (768)
Q Consensus 109 ~VtslafSP-D-G~~LaSgS~DgtVrVWDl~tg~~l~~l~g-------------------H~g~V~sVafSP~dg~lLaS 167 (768)
.|.++++.| + ...|+.+...+.|...+ +.|+....+.. ....+..|.++|.+...+..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 588899997 3 56677777777676664 23333232221 12347788998844444444
Q ss_pred EeCCCeEEEEECCCCcEEEEecC--------------CCCeEEEEEcCC-CCEEEEEECCeEEEEEcCCCccccCCeEee
Q 004203 168 GSLDHEVRLWNASTAECIGSRDF--------------YRPIASIAFHAS-GELLAVASGHKLYIWRYNMREETSSPRIVL 232 (768)
Q Consensus 168 gS~DgtVrLWDl~sg~~i~~l~h--------------~~~V~svafSPD-G~~LatgSdd~I~IWDl~t~~~~~~~~~l~ 232 (768)
+..++.|+..+- .|+....+.. ...+.+++++|+ ...|.++..+.|+..+-....-......+.
T Consensus 195 g~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~D~G~tW~~~~~~l~ 273 (394)
T 3b7f_A 195 GMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDRREGVWKRIGDAMP 273 (394)
T ss_dssp EEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEETTTTEEECGGGGSC
T ss_pred EECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeCCCCCcceECCCCCC
Confidence 544444544322 2322222110 124889999986 457777777777666532222111000000
Q ss_pred c-CCCCeEEEEEccC-CCeEEEE
Q 004203 233 R-TRRSLRAVHFHPH-AAPLLLT 253 (768)
Q Consensus 233 ~-h~~~V~sVaFSPD-G~~LlaS 253 (768)
. ....+..+.++|. ...+.++
T Consensus 274 ~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 274 REVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp TTTCSCEEEEEECSSCTTCEEEE
T ss_pred CCCccceEEEEECCCCCCEEEEE
Confidence 0 0034577888874 3334443
No 408
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=22.15 E-value=1e+02 Score=36.44 Aligned_cols=30 Identities=10% Similarity=0.304 Sum_probs=26.6
Q ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecC
Q 004203 161 NPTIIASGSLDHEVRLWNASTAECIGSRDF 190 (768)
Q Consensus 161 dg~lLaSgS~DgtVrLWDl~sg~~i~~l~h 190 (768)
+..++++-+.|+++|+||+++++++.....
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 568999999999999999999998887654
No 409
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=21.64 E-value=58 Score=32.11 Aligned_cols=74 Identities=20% Similarity=0.434 Sum_probs=38.0
Q ss_pred chhhhhh-HhhhccceeE----EEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE----------ecCcE
Q 004203 637 GTVLTSR-AIRAAHCLTS----IQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR----------VSDME 701 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 701 (768)
|.++..+ .++||||+.. ..+.+. .+.+-+|.....-. ......++.|.+++. -.|+.
T Consensus 30 GtLI~~~~VLTAAHC~~~~~~~~~~~~~--~~~v~~G~~~~~~~------~~~~~~~~~v~~i~~hp~y~~~~~~~~DIA 101 (259)
T 3rm2_H 30 ASLISDRWVLTAAHCLLYPPWDKNFTEN--DLLVRIGKHSRTRY------ERNIEKISMLEKIYIHPRYNWRENLDRDIA 101 (259)
T ss_dssp EEECSSSEEEECGGGTEEGGGTEECCGG--GEEEEESCCBSSSC------CTTTCEEEEEEEEEECTTCBTTTTCBTCCE
T ss_pred EEEEeCCEEEEcHHhCcccccccccCcc--cEEEEECccccccc------ccCcceeeEEEEEEECCCCCCCCCCCCcEE
Confidence 5555555 7899999964 334443 34444554332111 111122334555532 13888
Q ss_pred EEEeecCCC--CceeeeEe
Q 004203 702 LVRVLPSAE--DEVNVACF 718 (768)
Q Consensus 702 ~~~~~~~~~--~~~~~~~~ 718 (768)
|++.-.... +.|.-+|.
T Consensus 102 Ll~L~~~v~~~~~v~picL 120 (259)
T 3rm2_H 102 LMKLKKPVAFSDYIHPVCL 120 (259)
T ss_dssp EEEESSCCCCBTTBCCCBC
T ss_pred EEEeCCceEcCCCcccccC
Confidence 888643332 45666665
No 410
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=21.49 E-value=58 Score=31.81 Aligned_cols=67 Identities=18% Similarity=0.355 Sum_probs=35.0
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (768)
|.++..+ .++||||+. .. +.+-+|...... . +.....+.|.+++. -.|+.|++.-
T Consensus 27 GsLIs~~~VLTAAHC~~------~~--~~v~~G~~~~~~-----~--~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 91 (223)
T 3mfj_A 27 GSLINSQWVVSAAHCYK------SG--IQVRLGEDNINV-----V--EGNEQFISASKSIVHPSYNSNTLNNDIMLIKLK 91 (223)
T ss_dssp EEEEETTEEEECGGGCC------SS--CEEEESCSSTTS-----C--CSCCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEecCCEEEEhHHhcC------CC--cEEEECCceecc-----c--CCCcEEEEeeEEEECCCCCCCCCCCCEEEEEeC
Confidence 5555555 789999983 22 233334332211 1 11224556666654 2588888853
Q ss_pred cCCC--CceeeeEe
Q 004203 707 PSAE--DEVNVACF 718 (768)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (768)
.... +.|.-+|.
T Consensus 92 ~~~~~~~~v~picL 105 (223)
T 3mfj_A 92 SAASLNSRVASISL 105 (223)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CCcccCCcEeeeEC
Confidence 3332 34555665
No 411
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=20.81 E-value=24 Score=34.83 Aligned_cols=17 Identities=24% Similarity=0.835 Sum_probs=12.2
Q ss_pred chhhhhh-HhhhccceeE
Q 004203 637 GTVLTSR-AIRAAHCLTS 653 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~ 653 (768)
|.++..+ .++||||+..
T Consensus 30 GtLIs~~~VLTAAhC~~~ 47 (240)
T 1fon_A 30 GSLIAPDWVVTAGHCIST 47 (240)
T ss_dssp CEEEETTEEEECGGGCCT
T ss_pred EEEeeCCEEEECHHHCCC
Confidence 4555555 8899999864
No 412
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=20.62 E-value=34 Score=33.27 Aligned_cols=71 Identities=17% Similarity=0.302 Sum_probs=38.2
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE--------ecCcEEEEeec
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR--------VSDMELVRVLP 707 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 707 (768)
|.++..+ .++||||+.. .....+.+.+|.....- ......+.+.+++. -.|+.|++.-.
T Consensus 30 GtLI~~~~VLTAAHC~~~----~~~~~~~v~~g~~~~~~--------~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~ 97 (228)
T 3h7o_A 30 GAILSQWFVLTAAHCVFD----QKPETIVIQYESTNLWE--------DPGKSDPYVSHVYLSFYRQETMENDIAILELSR 97 (228)
T ss_dssp EEESSSSEEEECHHHHTT----SCGGGCEEEESCSBTTT--------BCCEEECCEEEEEESSCBTTTTBTCCEEEEESS
T ss_pred eEEeeCCEEEEcHHhccc----CCCCcEEEEeccccccc--------CCCceeeeEEEEEccccCCCCccCCEEEEEECC
Confidence 6666666 7899999962 22344555555543311 11113444555553 25888888533
Q ss_pred CCC--C-ceeeeEec
Q 004203 708 SAE--D-EVNVACFH 719 (768)
Q Consensus 708 ~~~--~-~~~~~~~~ 719 (768)
... + .|..+|.-
T Consensus 98 ~v~~~~~~v~pi~lp 112 (228)
T 3h7o_A 98 PLKLDGLKSKPAKLP 112 (228)
T ss_dssp CCCCCSSSSCCCBCC
T ss_pred cccccccccccccCC
Confidence 222 2 45566654
No 413
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=20.45 E-value=1e+03 Score=27.40 Aligned_cols=101 Identities=10% Similarity=0.014 Sum_probs=57.8
Q ss_pred CeEEEEECCC-CCEEEEEeCCCeEEEEeCCCCeEEEEEecC-------CCCcEEEEEccCCCCEEEEEeCC-------Ce
Q 004203 109 STIAAAFSPD-GKTLASTHGDHTVKIIDCQTGSCLKVLHGH-------RRTPWVVRFHPLNPTIIASGSLD-------HE 173 (768)
Q Consensus 109 ~VtslafSPD-G~~LaSgS~DgtVrVWDl~tg~~l~~l~gH-------~g~V~sVafSP~dg~lLaSgS~D-------gt 173 (768)
.|.+|+++|+ ...++.+...+.|+.++ +.|+.-..+..+ ...|..|+++|.+.+.++.+... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 7999999995 46677777777777776 345544444322 13588999998555544444321 12
Q ss_pred EEEEECC-CCcEEEEec--CC--------CCeEEEEEcCCC-CEEEEEE
Q 004203 174 VRLWNAS-TAECIGSRD--FY--------RPIASIAFHASG-ELLAVAS 210 (768)
Q Consensus 174 VrLWDl~-sg~~i~~l~--h~--------~~V~svafSPDG-~~LatgS 210 (768)
..||.-. .|+.-.... .. ..+..++++|.. ..|+++.
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 3444433 343322211 11 124679999854 5666665
No 414
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=20.35 E-value=61 Score=31.68 Aligned_cols=69 Identities=23% Similarity=0.316 Sum_probs=36.3
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004203 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (768)
|.++..+ .++||||+.. + ..+.+-+|...... .+....++.|.+++. -.|+.|++.-
T Consensus 29 GtLI~~~~VLTAAHC~~~----~--~~~~V~~G~~~~~~-------~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (228)
T 1fxy_A 29 GTILSEFYILTAAHCLYQ----A--KRFKVRVGDRNTEQ-------EEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK 95 (228)
T ss_dssp EEECSSSEEEECGGGTTS----C--SSCEEEEECSCTTT-------CCCCEEEEEEEEEEECTTCBTTTTBTCCEEEEES
T ss_pred EEEeeCCEEEECHHHCCC----C--CcEEEEECccCccc-------cCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEEC
Confidence 4555555 7899999842 2 23334444433211 112234566666654 2488888854
Q ss_pred cCCC--CceeeeEe
Q 004203 707 PSAE--DEVNVACF 718 (768)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (768)
.... +.|.-+|.
T Consensus 96 ~~v~~~~~v~picL 109 (228)
T 1fxy_A 96 TPITFRMNVAPASL 109 (228)
T ss_dssp SCCCCBTTBCCCCC
T ss_pred CcccCCCceeccCC
Confidence 3332 34555665
No 415
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=20.14 E-value=78 Score=32.25 Aligned_cols=75 Identities=20% Similarity=0.403 Sum_probs=38.4
Q ss_pred chhhhhh-HhhhccceeE----EEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE----------ecCcE
Q 004203 637 GTVLTSR-AIRAAHCLTS----IQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR----------VSDME 701 (768)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 701 (768)
|.++..+ .++||||+.. ..+.+.. +.+-+|.-...- .......++.|.+++. -.|+.
T Consensus 60 GsLIs~~~VLTAAHC~~~~~~~~~~~~~~--~~V~~G~~~~~~------~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIA 131 (289)
T 2bdy_A 60 ASLISDRWVLTAAHCLLYPPWDKNFTEND--LLVRIGKHSRTR------YERNIEKISMLEKIYIHPRYNWRENLDRDIA 131 (289)
T ss_dssp EEECSSSEEEECGGGTEEGGGTEECCGGG--EEEEESCCBSSS------CCTTTCEEEEEEEEEECTTCBTTTTCBTCCE
T ss_pred EEEecCCEEEEcHHhcccCccccccCccc--EEEEEccccccc------cCCCcceeeeeEEEEECCCCCCCCCCCCeEE
Confidence 4555555 7899999864 2344433 344444422210 0111223445555542 24888
Q ss_pred EEEeecCCC--CceeeeEec
Q 004203 702 LVRVLPSAE--DEVNVACFH 719 (768)
Q Consensus 702 ~~~~~~~~~--~~~~~~~~~ 719 (768)
|++.-.... +.|.-+|.-
T Consensus 132 Ll~L~~pv~~~~~v~picLp 151 (289)
T 2bdy_A 132 LMKLKKPVAFSDYIHPVCLP 151 (289)
T ss_dssp EEEESSCCCCBTTBCCCBCC
T ss_pred EEEECCccccCCcccccCCC
Confidence 888543332 456667763
Done!