Query 004205
Match_columns 768
No_of_seqs 479 out of 3108
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 17:36:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004205.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004205hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 2E-118 8E-123 1039.6 48.4 614 119-760 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 8E-110 3E-114 971.0 49.2 603 119-759 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1.4E-81 4.8E-86 761.7 44.5 528 132-759 5-605 (926)
4 3afg_A Subtilisin-like serine 100.0 9.6E-62 3.3E-66 555.4 31.6 362 34-619 33-418 (539)
5 2z2z_A TK-subtilisin precursor 100.0 1.8E-59 6.2E-64 519.9 20.7 344 35-619 1-392 (395)
6 3t41_A Epidermin leader peptid 100.0 3.6E-56 1.2E-60 505.9 29.8 358 35-620 43-466 (471)
7 2p4e_P Proprotein convertase s 100.0 2.1E-58 7E-63 529.9 8.3 334 37-585 76-422 (692)
8 1r6v_A Subtilisin-like serine 100.0 9.7E-56 3.3E-60 511.3 26.6 367 32-630 27-450 (671)
9 1y9z_A Alkaline serine proteas 100.0 2.6E-55 8.7E-60 493.6 26.4 381 125-640 5-437 (441)
10 1dbi_A AK.1 serine protease; h 100.0 2.6E-52 9E-57 440.8 23.9 267 124-618 11-279 (280)
11 1gci_A Subtilisin; hydrolase, 100.0 1.7E-52 5.7E-57 439.5 21.6 263 125-618 5-269 (269)
12 1r0r_E Subtilisin carlsberg; h 100.0 1.5E-52 5.2E-57 441.4 20.2 264 125-618 5-274 (274)
13 1to2_E Subtilisin BPN'; serine 100.0 4.7E-52 1.6E-56 439.1 20.9 266 125-619 5-276 (281)
14 1thm_A Thermitase; hydrolase(s 100.0 1.2E-51 4E-56 435.8 22.3 266 124-618 11-278 (279)
15 2x8j_A Intracellular subtilisi 100.0 7E-52 2.4E-56 447.0 19.6 273 124-619 21-311 (327)
16 2ixt_A 36KDA protease; serine 100.0 1.4E-50 4.9E-55 434.9 25.0 288 125-613 7-309 (310)
17 4h6x_A Thiazoline oxidase/subt 100.0 3.4E-53 1.1E-57 463.1 3.1 304 135-618 22-337 (357)
18 2z30_A TK-subtilisin; thermoco 100.0 5.9E-51 2E-55 439.2 17.6 273 124-619 8-317 (320)
19 3zxy_A Subtilisin-like protein 100.0 4.4E-51 1.5E-55 432.8 15.0 264 141-618 4-274 (282)
20 4h6w_A N-terminal cyanobactin 100.0 2E-50 6.9E-55 433.1 14.4 270 134-618 11-287 (306)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 3.2E-50 1.1E-54 438.9 15.7 279 124-619 23-329 (347)
22 3lpc_A APRB2; protease, subtil 100.0 7.1E-50 2.4E-54 435.2 17.5 299 131-619 19-337 (340)
23 3lxu_X Tripeptidyl-peptidase 2 100.0 1.3E-48 4.5E-53 469.2 26.2 352 220-759 267-652 (1354)
24 1wmd_A Protease; alpha-beta hy 100.0 3.9E-49 1.3E-53 442.9 19.9 283 133-620 10-319 (434)
25 1sh7_A Extracellular subtilisi 100.0 2.2E-48 7.4E-53 411.2 24.0 234 133-585 18-256 (284)
26 2pwa_A Proteinase K; structure 100.0 2.5E-48 8.6E-53 409.6 19.3 238 124-585 6-259 (279)
27 2b6n_A Proteinase K; S binding 100.0 9E-48 3.1E-52 405.9 21.9 236 133-585 20-260 (278)
28 4dzt_A Aqualysin-1, aqualysin- 100.0 1.1E-47 3.9E-52 405.2 21.2 237 131-586 18-259 (276)
29 2qtw_B Proprotein convertase s 100.0 5.2E-47 1.8E-51 424.8 21.2 287 126-618 4-313 (546)
30 2oxa_A Extracellular serine pr 100.0 1.1E-46 3.7E-51 439.0 23.6 294 131-625 57-431 (600)
31 1p8j_A Furin precursor; prohor 100.0 7.5E-47 2.6E-51 427.9 18.2 296 131-622 25-333 (471)
32 3f7m_A Alkaline serine proteas 100.0 2.2E-46 7.4E-51 396.1 17.6 227 135-585 24-260 (279)
33 2id4_A Kexin; KEX2, kexin, fur 100.0 3E-46 1E-50 425.7 18.1 288 130-621 40-344 (503)
34 3hjr_A Extracellular serine pr 100.0 1.6E-44 5.5E-49 422.2 24.4 315 131-623 57-429 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 6.9E-25 2.4E-29 250.4 7.7 97 251-351 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 4.5E-22 1.5E-26 216.6 10.1 100 252-351 90-206 (372)
37 2w2n_P Proprotein convertase s 99.0 2.6E-10 8.9E-15 102.2 6.3 81 32-117 33-113 (114)
38 3edy_A Tripeptidyl-peptidase 1 99.0 1.2E-09 3.9E-14 124.0 12.1 99 252-351 262-374 (544)
39 3cnq_P Subtilisin BPN'; unclea 98.9 2.8E-09 9.6E-14 89.3 8.4 75 33-121 5-79 (80)
40 2qtw_A Proprotein convertase s 98.8 1.2E-08 4E-13 92.5 8.0 80 33-117 44-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.7 5.4E-08 1.8E-12 80.4 9.9 71 36-117 2-75 (76)
42 3icu_A E3 ubiquitin-protein li 98.6 3.1E-07 1E-11 89.3 11.1 91 398-491 82-187 (194)
43 2z30_B TK-subtilisin; thermoco 97.4 0.0002 6.7E-09 56.9 5.2 62 37-116 2-63 (65)
44 2ek8_A Aminopeptidase; metallo 96.4 0.0075 2.6E-07 66.5 9.7 71 405-478 106-182 (421)
45 2ys4_A Hydrocephalus-inducing 95.4 0.043 1.5E-06 49.1 8.2 75 675-756 40-115 (122)
46 3iib_A Peptidase M28; YP_92679 94.9 0.072 2.5E-06 59.0 9.9 79 408-489 123-225 (444)
47 3kas_A Transferrin receptor pr 94.6 0.061 2.1E-06 62.1 8.3 66 410-478 128-230 (640)
48 3fed_A Glutamate carboxypeptid 94.5 0.034 1.2E-06 64.8 6.1 68 409-479 150-268 (707)
49 3qbt_B Inositol polyphosphate 93.9 0.53 1.8E-05 43.0 11.6 87 675-762 42-140 (140)
50 1y9z_A Alkaline serine proteas 90.7 0.12 4.2E-06 57.1 3.4 47 496-550 180-226 (441)
51 2e6j_A Hydin protein; PAPD, st 87.4 1.4 4.7E-05 38.2 7.2 81 675-758 25-108 (112)
52 2r39_A FIXG-related protein; s 85.0 5.2 0.00018 35.1 9.8 53 677-731 32-84 (118)
53 3lxu_X Tripeptidyl-peptidase 2 84.9 0.43 1.5E-05 58.8 3.3 24 140-164 32-55 (1354)
54 3qis_A Inositol polyphosphate 84.8 6.5 0.00022 41.9 12.3 91 675-766 45-147 (366)
55 2qsv_A Uncharacterized protein 82.8 6.5 0.00022 38.6 10.5 84 676-763 19-109 (220)
56 1z9l_A Vesicle-associated memb 62.7 26 0.0009 30.9 8.2 53 675-730 26-78 (128)
57 1msp_A MSP, major sperm protei 61.9 24 0.00083 31.2 7.8 53 675-730 24-76 (126)
58 3idu_A Uncharacterized protein 61.8 35 0.0012 30.2 8.8 52 675-730 32-84 (127)
59 3isy_A Bsupi, intracellular pr 60.5 62 0.0021 28.3 9.9 70 675-745 17-104 (120)
60 1m1s_A WR4; structural genomic 59.7 42 0.0014 29.2 8.7 50 679-731 26-75 (116)
61 1wic_A Hypothetical protein ri 58.7 27 0.00091 32.0 7.7 54 675-731 34-87 (152)
62 1row_A SSP-19, MSP-domain prot 54.6 48 0.0016 28.4 8.1 49 679-730 18-66 (109)
63 2cri_A Vesicle-associated memb 52.7 32 0.0011 31.3 7.1 53 675-730 30-82 (147)
64 2qsv_A Uncharacterized protein 51.9 1E+02 0.0034 29.8 11.2 78 676-757 134-218 (220)
65 3zyz_A Beta-D-glucoside glucoh 49.2 44 0.0015 38.8 9.2 54 676-731 613-674 (713)
66 3rfr_A PMOB; membrane, oxidore 47.0 1.2E+02 0.0041 32.0 10.9 83 676-764 298-414 (419)
67 2x41_A Beta-glucosidase; hydro 46.8 17 0.0006 42.3 5.3 66 663-731 597-677 (721)
68 1w8o_A Bacterial sialidase; 3D 44.5 1.4E+02 0.005 33.3 12.7 86 666-755 364-451 (601)
69 3abz_A Beta-glucosidase I; gly 43.5 51 0.0017 39.1 8.7 69 661-731 715-798 (845)
70 1yew_A Particulate methane mon 43.1 2.2E+02 0.0076 29.7 12.1 84 676-763 264-381 (382)
71 2kq1_A BH0266 protein; solutio 40.5 5.8 0.0002 34.9 -0.1 53 678-730 55-109 (119)
72 4ep8_B Urease subunit beta; al 35.5 89 0.003 26.2 6.3 51 676-727 18-82 (101)
73 1wgl_A TOLL-interacting protei 35.3 22 0.00076 26.9 2.5 36 549-584 3-38 (59)
74 3e9t_A Na/Ca exchange protein; 34.9 1.8E+02 0.006 24.9 8.8 78 667-746 10-92 (114)
75 2qvk_A CBD2, sodium/calcium ex 28.7 77 0.0026 30.1 5.7 64 667-731 13-81 (192)
76 4ubp_B Protein (urease (chain 28.6 1.2E+02 0.004 26.6 6.1 51 676-727 24-88 (126)
77 4ac7_B Urease subunit beta; hy 28.6 1.2E+02 0.004 26.6 6.1 51 676-727 24-88 (126)
78 1ni7_A ER75, hypothetical prot 28.2 43 0.0015 30.7 3.7 33 544-577 78-110 (155)
79 3sd2_A Putative member of DUF3 25.9 3E+02 0.01 23.2 8.5 65 668-744 35-100 (101)
80 3g0m_A Cysteine desulfuration 24.0 42 0.0014 30.3 2.7 33 543-576 70-102 (141)
81 3ndz_E Endoglucanase D; cellot 23.3 3.4E+02 0.012 22.9 8.9 33 675-707 14-47 (107)
82 3ead_A Na/Ca exchange protein; 23.0 2.6E+02 0.0088 24.6 7.9 62 667-729 12-77 (137)
83 3o0l_A Uncharacterized protein 22.3 2E+02 0.0069 24.6 6.7 52 674-726 36-92 (112)
84 3hrz_B Cobra venom factor; ser 21.3 2.6E+02 0.0089 27.5 8.3 65 663-730 85-154 (252)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=2.2e-118 Score=1039.58 Aligned_cols=614 Identities=39% Similarity=0.682 Sum_probs=555.9
Q ss_pred CCCCcccccccccCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEE
Q 004205 119 TTHSWDFMGLMGEESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGAR 198 (768)
Q Consensus 119 ~~~s~~~~g~~~~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~ 198 (768)
++++|+|+|++ +...+|..+.+| +||+|||||||||++||+|.+.+++++|.+|+|.|+.+.+|+...||+|+++++
T Consensus 1 Tt~s~~flgl~--~~~~~w~~~~~G-~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~ 77 (649)
T 3i6s_A 1 TTHTSDFLKLN--PSSGLWPASGLG-QDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGAN 77 (649)
T ss_dssp CCSHHHHTTCC--SSSSHHHHHGGG-TTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEE
T ss_pred CCCChHHcCCC--CchhhHhccCCC-CCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeE
Confidence 57899999997 356799999999 999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCccccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCCCCHHHHHH
Q 004205 199 YYMSGYEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLA 278 (768)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g~~~~~i~~ 278 (768)
+|.+++.... .....+..+++|.+||||||||||||+.+++.+++|++.+.+.||||+|+|++||+++..++..+++++
T Consensus 78 ~f~~~~~~~~-~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ 156 (649)
T 3i6s_A 78 YFNKGILAND-PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIA 156 (649)
T ss_dssp ECCHHHHHHC-TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHH
T ss_pred eccCcccccc-cccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHH
Confidence 9987654322 122334467889999999999999999998888899888999999999999999999988899999999
Q ss_pred HHHHHHHcCCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-CCCcccCCCceEEEcccCCCcccee
Q 004205 279 AFDDAIRDGVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-EGSVTNLAPWMFTIAASSTDRDFTS 357 (768)
Q Consensus 279 ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~~~~~~~~p~vitVgAs~~~~~~~~ 357 (768)
||+||+++|+||||||||... ..+..+++++++++|.++||+||+||||+|+ ..+.++.+||+|+|||++.||.|..
T Consensus 157 Ai~~A~~~gvdVIn~SlG~~~--~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~ 234 (649)
T 3i6s_A 157 AMDQAVADGVDMISISYGYRF--IPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAG 234 (649)
T ss_dssp HHHHHHHTTCSEEEECCCCCS--CCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEE
T ss_pred HHHHHHHcCCCEEEeCCccCC--cccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceee
Confidence 999999999999999999873 4477899999999999999999999999999 8888999999999999999999999
Q ss_pred eEEeCCCceEecccc-------cccccccchhccccccccccccCcccCCccCcCCCCCCCC--CCeEEEEeecCCCchh
Q 004205 358 EIVLGDGANFTGESL-------SLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKA--RGKVLVCRHAESSTES 428 (768)
Q Consensus 358 ~~~~~~~~~~~g~~~-------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkivl~~~~~~g~~~ 428 (768)
.+.+++++.+.|+++ ..+|+++.. ....|.+..++..++ +|||++|. +|.+.
T Consensus 235 ~~~lgng~~~~g~sl~~~~~~~~~~plv~~~----------------~~~~C~~~~l~~~~vdl~GkIvlc~---~g~~~ 295 (649)
T 3i6s_A 235 TLTLGNGLKIRGWSLFPARAFVRDSPVIYNK----------------TLSDCSSEELLSQVENPENTIVICD---DNGDF 295 (649)
T ss_dssp EEEETTSCEEEEECCCSSCBCEEEEEEECCT----------------TTTTCCCHHHHTTSSSGGGCEEEEC---CCSCH
T ss_pred EEEeCCCcEEeeeecccCcccCcceeeEecc----------------cccccccccccccccccCCcEEEEe---CCCcc
Confidence 999999999999887 235555542 356799888888877 99999999 57899
Q ss_pred HHHHHHHHHHcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCC
Q 004205 429 KLRKSMVVKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSK 508 (768)
Q Consensus 429 ~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~ 508 (768)
+.+|..+++++|+.|+|++|+........+.+|+..++..+++.|++|++++.+++++|.+..+..+....+.++.||||
T Consensus 296 ~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSr 375 (649)
T 3i6s_A 296 SDQMRIITRARLKAAIFISEDPGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSAR 375 (649)
T ss_dssp HHHHHHHHHHTCSEEEEECCCGGGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCC
T ss_pred HHHHHHHHHhcCceEEEEecCccccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCC
Confidence 99999999999999999999885446677899999999999999999999999999999999999888889999999999
Q ss_pred CCCCCCCCcccCceeeCCceEEEEecCCC----------CCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 004205 509 GPNALNPEILKPDVTAPGLNIIAAWSPAV----------GKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAI 578 (768)
Q Consensus 509 Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~----------~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L 578 (768)
||+...++++||||+|||++|+|+|+... ....|..+||||||||||||+||||||+||+|||++||++|
T Consensus 376 GP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaL 455 (649)
T 3i6s_A 376 GPSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAM 455 (649)
T ss_dssp SSCTTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHH
T ss_pred CCCCCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 99987789999999999999999998631 22579999999999999999999999999999999999999
Q ss_pred HhhcccccCCCCCccCCCCCCCCCCCcccccccCccccCCCCeeecCCCcchhhhhhccCCCccceeEeecCCCc--CCC
Q 004205 579 MTTATALDKNHKPITVDPKGRRGNAFDYGSGFLNPRKVLSPGLIYDAQPIDYTVFLCSIGYDEKSLHLVTRDNSK--CSQ 656 (768)
Q Consensus 579 ~~TA~~~~~~g~p~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l~~~~~~~~y~~~~~~~g~~~~~~~~~~~~~~~--~~~ 656 (768)
|+||.++++.+.|+.+.....+++++.||+|+||+.+|++||||||.+++||+.|||++||+.++|+.+++++.+ |+.
T Consensus 456 mtTA~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~ 535 (649)
T 3i6s_A 456 MTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN 535 (649)
T ss_dssp HHTCBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC
T ss_pred hcccccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC
Confidence 999999999999998875677889999999999999999999999999999999999999999999999999888 975
Q ss_pred CCCCCCCCCCCeEEecC-CCcc-----EEEEEEEEecCCCceeEEEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEe
Q 004205 657 KLPAPYDLNYPSITVPN-LKGN-----FSVTRSVTNVGKPRSIYKAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKL 730 (768)
Q Consensus 657 ~~~~~~~ln~ps~~~~~-~~~~-----~t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~ 730 (768)
.+.|||||||++.. +.+. ++|+|||||+|+...+|++.++.|.|++|+|+|.+|+|.+.+|+++|+|||+.
T Consensus 536 ---~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~ 612 (649)
T 3i6s_A 536 ---PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRY 612 (649)
T ss_dssp ---CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEE
T ss_pred ---chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEe
Confidence 56799999999987 6666 89999999999989999999999999999999999999888999999999997
Q ss_pred cCC-CCceEEEEEEEEc--CceEEEEEEEEEEe
Q 004205 731 TSP-PKGYGFGYLSWKN--GKLRVTSPLVVQVA 760 (768)
Q Consensus 731 ~~~-~~~~~~G~i~~~~--~~~~v~~P~~~~~~ 760 (768)
... ...|.||+|+|++ ++|.||+||+|++.
T Consensus 613 ~~~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 613 IGDEGQSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp CCC---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred cccCCCceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 533 4568999999999 89999999999864
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=8.1e-110 Score=971.02 Aligned_cols=603 Identities=43% Similarity=0.780 Sum_probs=507.2
Q ss_pred CCCCcccccccccCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEE
Q 004205 119 TTHSWDFMGLMGEESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGAR 198 (768)
Q Consensus 119 ~~~s~~~~g~~~~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~ 198 (768)
++++|+|+||+ ..+|.+..+| +||+|||||||||++||+|+++++++++.+|+|.|+.+.+|. ||+|++|++
T Consensus 1 tt~s~~flGl~----~~~~~~~~~G-~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~---~n~k~ig~~ 72 (621)
T 3vta_A 1 TTRSWDFLGFP----LTVPRRSQVE-SNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGAR 72 (621)
T ss_dssp CCSHHHHTTCC----TTCCCCHHHH-TTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCC---CCSSEEEEE
T ss_pred CCCChhHcCCC----ccccccCCCC-CCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcc---cCcceeeee
Confidence 57899999996 3688888889 999999999999999999999999999999999999999886 999999999
Q ss_pred eccCCccccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCCCCHHHHHH
Q 004205 199 YYMSGYEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLA 278 (768)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g~~~~~i~~ 278 (768)
+|..+.... +.+..+++|++||||||||||||+..++.+..|++.+.++||||+|+|++||+|++.+|..+++++
T Consensus 73 ~~~~~~~~~-----~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~ 147 (621)
T 3vta_A 73 SYHIGRPIS-----PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILA 147 (621)
T ss_dssp ECCCSSSCC-----TTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHH
T ss_pred ecccCCccC-----CCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHH
Confidence 998764432 334467889999999999999999988888888888889999999999999999998999999999
Q ss_pred HHHHHHHcCCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-CCCcccCCCceEEEcccCCCcccee
Q 004205 279 AFDDAIRDGVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-EGSVTNLAPWMFTIAASSTDRDFTS 357 (768)
Q Consensus 279 ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~~~~~~~~p~vitVgAs~~~~~~~~ 357 (768)
||++|+++|+||||||||+.. +.++..+++++++++|.++||+||+||||+|+ ..++++.+||+++|++++.++.+..
T Consensus 148 a~~~a~~~g~dVin~SlG~~~-~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~ 226 (621)
T 3vta_A 148 AYDDAIADGVDIISLSVGGAN-PRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVT 226 (621)
T ss_dssp HHHHHHHHTCSEEEECCCCCC-GGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEE
T ss_pred HHHHHHHhCCCEEEecCCCCC-CCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeecccccee
Confidence 999999999999999999876 44567789999999999999999999999999 8899999999999999999999999
Q ss_pred eEEeCCCceEecccc-----cccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHH
Q 004205 358 EIVLGDGANFTGESL-----SLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRK 432 (768)
Q Consensus 358 ~~~~~~~~~~~g~~~-----~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k 432 (768)
.+.++++..+.+.++ ..+++++..+..... ........|.+..+++.+++|||++|.+. +..+
T Consensus 227 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~v~gkivl~~~~------~~~~ 294 (621)
T 3vta_A 227 QVQIGNGQSFQGVSINTFDNQYYPLVSGRDIPNTG------FDKSTSRFCTDKSVNPNLLKGKIVVCEAS------FGPH 294 (621)
T ss_dssp EEEETTSCEEEEBCCCCSCCEEECEEETTTSCCTT------CCHHHHTTTCTTCSCGGGTTTSEEECSSC------CCHH
T ss_pred eEEeccCceeeeeecccCCCccccccccccccccc------ccccccccccccccccccccceEEEEecC------CChh
Confidence 999999999988877 344555443322211 23344677999999999999999999742 3456
Q ss_pred HHHHHHcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCC
Q 004205 433 SMVVKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNA 512 (768)
Q Consensus 433 ~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~ 512 (768)
..+....|+.+++++++... ..+.+.+|...++..++..++.|+..+..+.+++....+.. ....+.++.||||||+.
T Consensus 295 ~~~~~~~Ga~gvi~~~~~~~-~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~-~~~~~~va~FSSrGP~~ 372 (621)
T 3vta_A 295 EFFKSLDGAAGVLMTSNTRD-YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTIL-NASAPVVVSFSSRGPNR 372 (621)
T ss_dssp HHHHHHTTCSEEEEECSCCS-SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEE-CTTCCCBCTTSCCCSCT
T ss_pred HHhhhhcceeEEEEEecCCC-cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEec-cCCCCceeeecCCCCCC
Confidence 67777889999999987654 44567899999999999999999999999988887666554 45678999999999998
Q ss_pred CCCCcccCceeeCCceEEEEecCC------CCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhccccc
Q 004205 513 LNPEILKPDVTAPGLNIIAAWSPA------VGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATALD 586 (768)
Q Consensus 513 ~~~~~~KPDI~APG~~I~Sa~~~~------~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~ 586 (768)
..++++||||+|||++|+|+|+.. .....|..|||||||||||||+||||||+||+|+|++||++||+||++++
T Consensus 373 ~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~ 452 (621)
T 3vta_A 373 ATKDVIKPDISGPGVEILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMN 452 (621)
T ss_dssp TCTTSCSCCEEEECSSEEEECCSSSCBTTBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCC
T ss_pred CCCCeeccccccCCcceEeecCccccccCcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCccc
Confidence 778999999999999999999743 12456999999999999999999999999999999999999999999775
Q ss_pred CCCCCccCCCCCCCCCCCcccccccCccccCCCCeeecCCCcchhhhhhccCCCccceeEeecCCCcCCC-CCCCCCCCC
Q 004205 587 KNHKPITVDPKGRRGNAFDYGSGFLNPRKVLSPGLIYDAQPIDYTVFLCSIGYDEKSLHLVTRDNSKCSQ-KLPAPYDLN 665 (768)
Q Consensus 587 ~~g~p~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l~~~~~~~~y~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~ln 665 (768)
..+ .+..+++||+|+||+.+|++||||||.+.+||+.|||++||+.++++.++++...|+. ......|||
T Consensus 453 ~~~---------~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lN 523 (621)
T 3vta_A 453 ARF---------NPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLN 523 (621)
T ss_dssp TTT---------CTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CGGGSC
T ss_pred ccC---------CCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCcccccc
Confidence 433 3566789999999999999999999999999999999999999999999999888855 445678999
Q ss_pred CCeEEec---CCCccEEEEEEEEecCCCceeEEEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEecCCCCceEEEEE
Q 004205 666 YPSITVP---NLKGNFSVTRSVTNVGKPRSIYKAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKLTSPPKGYGFGYL 742 (768)
Q Consensus 666 ~ps~~~~---~~~~~~t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~i 742 (768)
||||++. ++..+++++|||||+|....+|+++++.|.|++|+|+|.+|+|.+.+|+++|+|||+. ...+.|+||+|
T Consensus 524 ~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~-~~~~~~~~g~l 602 (621)
T 3vta_A 524 YPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRG-SIKGFVVSASL 602 (621)
T ss_dssp CSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEE-CCCSSEEEEEE
T ss_pred cccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEe-cCCCceEEEEE
Confidence 9999985 4567899999999999999999999999999999999999999988999999999986 34677999999
Q ss_pred EEEcCceEEEEEEEEEE
Q 004205 743 SWKNGKLRVTSPLVVQV 759 (768)
Q Consensus 743 ~~~~~~~~v~~P~~~~~ 759 (768)
+|+|++|.||+||+|+.
T Consensus 603 ~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 603 VWSDGVHYVRSPITITS 619 (621)
T ss_dssp EEECSSCCCEEEEEEEC
T ss_pred EEEcCCEEEEeCEEEEE
Confidence 99999999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1.4e-81 Score=761.66 Aligned_cols=528 Identities=22% Similarity=0.290 Sum_probs=415.5
Q ss_pred CCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCC----------ccccCCceeEEEEecc
Q 004205 132 ESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAF----------NASSCNRKVIGARYYM 201 (768)
Q Consensus 132 ~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f----------~~~~~n~ki~g~~~~~ 201 (768)
++..+|.++.+| +||+|||||||||++||+|.+ +..|++.|.....| .+.+||+|++++++|.
T Consensus 5 ~~~~~w~~~~~G-~GV~VaVIDTGId~~Hp~f~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~ 77 (926)
T 1xf1_A 5 QVKTLQEKAGKG-AGTVVAVIDAGFDKNHEAWRL------TDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYS 77 (926)
T ss_dssp CCHHHHHHHCSC-TTCEEEEEESCCTTCCCCCSC------CSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESC
T ss_pred ccHHHHhccCCC-CCcEEEEEecCCCCCCHhHcC------CCCCcccccchhhhcccccccCcccccccCcccceeeccc
Confidence 455899999999 999999999999999999984 34566666543222 2457999999999997
Q ss_pred CCccccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC--CCHHHHHHH
Q 004205 202 SGYEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG--CYDVDLLAA 279 (768)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g--~~~~~i~~a 279 (768)
++. ...|..||||||||||||+...+.+. .+.+.||||+|+|++||+++..+ +..+++++|
T Consensus 78 ~~~-------------~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~A 140 (926)
T 1xf1_A 78 KDG-------------KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQA 140 (926)
T ss_dssp CCS-------------CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHH
T ss_pred cCC-------------CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHH
Confidence 641 12288999999999999987544321 24679999999999999998766 456789999
Q ss_pred HHHHHHcCCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-C---------------CCcccCCCce
Q 004205 280 FDDAIRDGVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-E---------------GSVTNLAPWM 343 (768)
Q Consensus 280 i~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~---------------~~~~~~~p~v 343 (768)
|+||+++|+||||||||......+...++++.+++.|.++||+||+||||+|. . ...++.+||+
T Consensus 141 i~~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~v 220 (926)
T 1xf1_A 141 IRDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADST 220 (926)
T ss_dssp HHHHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCS
T ss_pred HHHHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCce
Confidence 99999999999999999875223455678899999999999999999999995 1 1234558999
Q ss_pred EEEcccCCCccceeeEEe-CCCceEecccc---------cccccccchhccccccccccccCcccCCccCcCCCCCCCCC
Q 004205 344 FTIAASSTDRDFTSEIVL-GDGANFTGESL---------SLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKAR 413 (768)
Q Consensus 344 itVgAs~~~~~~~~~~~~-~~~~~~~g~~~---------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 413 (768)
|+|||++.++.+...+.+ +++....+.++ ..+|+++. ...|.+..+ .+++
T Consensus 221 itVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~------------------~~g~~~~~~--~~v~ 280 (926)
T 1xf1_A 221 LTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYA------------------NRGTKEDDF--KDVK 280 (926)
T ss_dssp EEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEEC------------------TTSCSTTTT--TTCT
T ss_pred EEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEEC------------------CCCCCccch--hhcC
Confidence 999999999998888877 55543333322 23444433 123766555 6899
Q ss_pred CeEEEEeecCCCchhHHHHHHHHHHcCceEEEEEcCCCCC----CCccceeeEEEechhhHHHHHHHHhccCccEEEEec
Q 004205 414 GKVLVCRHAESSTESKLRKSMVVKEAGGVGMILVDEPGKD----VAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFP 489 (768)
Q Consensus 414 gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~----~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~ 489 (768)
|||+||+ ||.|.+.+|..+++.+|++|+|++|+.... .....++|+..++..++.+|++ ....++++..
T Consensus 281 Gkivl~~---rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~ 353 (926)
T 1xf1_A 281 GKIALIE---RGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNA 353 (926)
T ss_dssp TSEEEEE---CCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECS
T ss_pred CeEEEEE---CCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecc
Confidence 9999999 578999999999999999999999987654 3456789999999999998884 3333444433
Q ss_pred CeeecCCCCCCccccccCCCCCCCCCCcccCceeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHH----h
Q 004205 490 AKTVLGSEPAPRVAAFSSKGPNALNPEILKPDVTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKA----V 565 (768)
Q Consensus 490 ~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~ 565 (768)
..........+.++.||||||+. ++++||||+|||++|+|+++. +.|..+||||||||||||+||||+| +
T Consensus 354 ~~~~~~~~~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~----~~y~~~SGTSMAaPhVAG~aALl~q~~k~~ 427 (926)
T 1xf1_A 354 TPKVLPTASGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVAN----NKYAKLSGTSMSAPLVAGIMGLLQKQYETQ 427 (926)
T ss_dssp SCEEEECSSCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSC----SSSCEEESCTTHHHHHHHHHHHHHHHHHHS
T ss_pred cceecccCCcceeccccCCCCCC--CCccCceEECCCCCEEeeccC----CcceecCccchhHHHHHHHHHHHHHHHhcc
Confidence 33334456678999999999996 899999999999999999974 4699999999999999999999964 5
Q ss_pred CCCCCHHH----HHHHHHhhcccccCCCCCccCCCCCCCCCCCcccccccCccccCCCCeeecCCCcchhhhhhccCCCc
Q 004205 566 HPSWSPSA----IKSAIMTTATALDKNHKPITVDPKGRRGNAFDYGSGFLNPRKVLSPGLIYDAQPIDYTVFLCSIGYDE 641 (768)
Q Consensus 566 ~p~lsp~~----ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l~~~~~~~~y~~~~~~~g~~~ 641 (768)
||+|+|+| ||++||+||++++..+ ....+++++||+|+||+.+|+++.+ |||..+++.
T Consensus 428 ~P~~sp~~~~~~Iks~L~~TA~~~~~~~-------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~ 489 (926)
T 1xf1_A 428 YPDMTPSERLDLAKKVLMSSATALYDED-------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTS 489 (926)
T ss_dssp SSSSHHHHHHHHHHHHHHHHSBCCEEGG-------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSC
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCcccCC-------CCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCc
Confidence 99999997 9999999999764321 1235678999999999999999843 678766543
Q ss_pred cceeEeecCCCcCCCCCCCCCCCCCCeEEecCCCccEEEEEEEEecCCC--ceeEEEEEeC--CCceEEEEecCEEEEc-
Q 004205 642 KSLHLVTRDNSKCSQKLPAPYDLNYPSITVPNLKGNFSVTRSVTNVGKP--RSIYKAVVSS--PVGVTVTVAPERLIFN- 716 (768)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~t~~~tv~N~~~~--~~ty~~~~~~--~~g~~v~~~p~~~~~~- 716 (768)
. ++.+.++.+.++++|||+|+|+. ..+|++++.. +.+..++++|..|.|.
T Consensus 490 ~-------------------------~i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~ 544 (926)
T 1xf1_A 490 S-------------------------KVHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETS 544 (926)
T ss_dssp S-------------------------CEEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECC
T ss_pred c-------------------------eeeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEecc
Confidence 2 34455556788999999999985 4568877764 6788888888766543
Q ss_pred ------CCCeEEEEEEEEEecC---------CCCceEEEEEEEE--cCce-EEEEEEEEEE
Q 004205 717 ------SYGQKINFTVHFKLTS---------PPKGYGFGYLSWK--NGKL-RVTSPLVVQV 759 (768)
Q Consensus 717 ------~~~~~~~~~vt~~~~~---------~~~~~~~G~i~~~--~~~~-~v~~P~~~~~ 759 (768)
++||+++|+|||+++. ..+.|+||+|+|+ ++.| .||+||+++.
T Consensus 545 ~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 545 WQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp CEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred CCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 4599999999999751 2345899999999 4556 4999999984
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=9.6e-62 Score=555.41 Aligned_cols=362 Identities=30% Similarity=0.421 Sum_probs=288.8
Q ss_pred CCCcEEEEEeCCCCCCCCchhhHhHHHHHHHHhcCcccccccceEEEecceeeEEEEEeCHHHHHHH-----------hc
Q 004205 34 FSAKVYVVYMGTTTGEDPLDVWRQHHQMLAVVHAGSMEQAQASHVYSYKHGFRGFAAKLTDQQASQI-----------AQ 102 (768)
Q Consensus 34 ~~~~~yiV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~L-----------~~ 102 (768)
...-+|||+|++.. ..+...++++.+ ..++.++|. .|+||+++++++++++| ++
T Consensus 33 ~~~~~~iV~~~~~~------~~~~~~~~~~~~--------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~ 97 (539)
T 3afg_A 33 DQEVSTIIMFDNQA------DKEKAVEILDFL--------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQ 97 (539)
T ss_dssp TCEEEEEEEESSHH------HHHHHHHHHHHH--------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCC
T ss_pred cCceEEEEEECCCC------CHHHHHHHHHhc--------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhcccccccccc
Confidence 34567999999763 122223333332 367889997 79999999999999999 89
Q ss_pred CCCeEEEEecceeccCCCCCcccccccccCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccC
Q 004205 103 MPGVVSVFPNMKRRLHTTHSWDFMGLMGEESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESG 182 (768)
Q Consensus 103 ~p~V~~V~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~ 182 (768)
+|+|++|++++.+++.............+++..+|..+.+| +||+|||||||||++||+|.+
T Consensus 98 ~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G-~gv~VaViDtGid~~Hpdl~~----------------- 159 (539)
T 3afg_A 98 LSGVQFIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYDG-SGITIGIIDTGIDASHPDLQG----------------- 159 (539)
T ss_dssp CTTEEEEEECCEEECC-----------CCBCSCCBCCSCCC-TTCEEEEEESBCCTTSGGGTT-----------------
T ss_pred CCCeeEEEecccccccCccccCCccccccCcHhHHhcCCCC-CCcEEEEEecCCCCCChHHhC-----------------
Confidence 99999999999988753321000112234567899999999 999999999999999999952
Q ss_pred CCCccccCCceeEEEEeccCCccccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEee
Q 004205 183 EAFNASSCNRKVIGARYYMSGYEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAV 262 (768)
Q Consensus 183 ~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~ 262 (768)
+++++++|.++. ..+.|++||||||||||||+.... .+.+.||||+|+|+.
T Consensus 160 ----------~i~~~~d~~~~~------------~~~~D~~gHGThVAgiiag~~~~~-------~g~~~GvAp~A~l~~ 210 (539)
T 3afg_A 160 ----------KVIGWVDFVNGK------------TTPYDDNGHGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVG 210 (539)
T ss_dssp ----------TEEEEEETTTCC------------SSCCBSSSHHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEEE
T ss_pred ----------CEeeeEECCCCC------------CCCCCCCCCHHHHHHHHhCcCccC-------CCCEEEECCCCEEEE
Confidence 466666765431 346788999999999999976431 234689999999999
Q ss_pred eeeecCCC-CCHHHHHHHHHHHHHc----CCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-C--C
Q 004205 263 YKTCWDSG-CYDVDLLAAFDDAIRD----GVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-E--G 334 (768)
Q Consensus 263 ~kv~~~~g-~~~~~i~~ai~~a~~~----g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~--~ 334 (768)
+|++++.+ +..+++++||+||+++ |++|||||||.... ....+++..+++++.++|++||+||||+|. . .
T Consensus 211 ~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~--~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~ 288 (539)
T 3afg_A 211 IKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQS--SDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTV 288 (539)
T ss_dssp EECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSC--CCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCC
T ss_pred EEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCC--CccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcc
Confidence 99998776 7789999999999975 89999999998752 245678889999999999999999999997 3 3
Q ss_pred CcccCCCceEEEcccCCCccceeeEEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCC
Q 004205 335 SVTNLAPWMFTIAASSTDRDFTSEIVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARG 414 (768)
Q Consensus 335 ~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g 414 (768)
..|+..+++|+|||++.
T Consensus 289 ~~Pa~~~~vitVgA~~~--------------------------------------------------------------- 305 (539)
T 3afg_A 289 GSPAAASKVITVGAVDK--------------------------------------------------------------- 305 (539)
T ss_dssp CTTTTCSSSEEEEEECT---------------------------------------------------------------
T ss_pred cCCccCCceEEEeeecC---------------------------------------------------------------
Confidence 56788899999997431
Q ss_pred eEEEEeecCCCchhHHHHHHHHHHcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeec
Q 004205 415 KVLVCRHAESSTESKLRKSMVVKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVL 494 (768)
Q Consensus 415 kivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~ 494 (768)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccccccCCCCCCCCCCcccCceeeCCceEEEEecCCC--C---CcceEEeccccchhHHHHHHHHHHHHhCCCC
Q 004205 495 GSEPAPRVAAFSSKGPNALNPEILKPDVTAPGLNIIAAWSPAV--G---KMQFNILSGTSMACPHVTGIATLIKAVHPSW 569 (768)
Q Consensus 495 ~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~--~---~~~y~~~sGTSmAaP~VAG~aALl~q~~p~l 569 (768)
.+.++.||||||+. ++++||||+|||++|+++++... + ...|..++|||||||||||++|||+|++|+|
T Consensus 306 ----~~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~ 379 (539)
T 3afg_A 306 ----YDVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSW 379 (539)
T ss_dssp ----TSCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCCSEECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTC
T ss_pred ----CcccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCCCCCCcccccccCchHHHHHHHHHHHHHHHHHCCCC
Confidence 14688999999997 89999999999999999986321 1 1259999999999999999999999999999
Q ss_pred CHHHHHHHHHhhcccccCCCCCccCCCCCCCCCCCcccccccCccccCCC
Q 004205 570 SPSAIKSAIMTTATALDKNHKPITVDPKGRRGNAFDYGSGFLNPRKVLSP 619 (768)
Q Consensus 570 sp~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 619 (768)
+|++||++|++||++++.. ..+++.||+|+||+.+|++.
T Consensus 380 s~~~vk~~L~~tA~~~~~~-----------~~~~~~~G~G~vn~~~Al~~ 418 (539)
T 3afg_A 380 TPDKVKTALIETADIVKPD-----------EIADIAYGAGRVNAYKAAYY 418 (539)
T ss_dssp CHHHHHHHHHHHSBCSSGG-----------GCSBTTTBTCBCCHHHHHTG
T ss_pred CHHHHHHHHHhhCccCCCC-----------CCCccCccCCccCHHHHhhh
Confidence 9999999999999975321 13467899999999999984
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.8e-59 Score=519.91 Aligned_cols=344 Identities=24% Similarity=0.342 Sum_probs=279.5
Q ss_pred CCcEEEEEeCCCCCCCCchhhHhHHHHHHHHhcCcccccccceEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEEecce
Q 004205 35 SAKVYVVYMGTTTGEDPLDVWRQHHQMLAVVHAGSMEQAQASHVYSYKHGFRGFAAKLTDQQASQIAQMPGVVSVFPNMK 114 (768)
Q Consensus 35 ~~~~yiV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~V~~~~~ 114 (768)
++.+|||+||+... ..++++ ....++.++|. .+++|+++++++++++|+++|+|++|++++.
T Consensus 1 ~~~~~iV~~~~~~~---------~~~~~~--------~~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~ 62 (395)
T 2z2z_A 1 NTIRVIVSVDKAKF---------NPHEVL--------GIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQ 62 (395)
T ss_dssp CEEEEEEEECTTTC---------CHHHHH--------HTTCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCE
T ss_pred CcEEEEEEECCCcc---------HHHHHH--------HcCCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeee
Confidence 35789999998741 112222 23467889997 5999999999999999999999999999998
Q ss_pred eccCCCCC-----------cccccccccCCCCcCCCCCCCCcc--eEEEEEeCCCCCCCCCCCCCCCCCCCCcccccccc
Q 004205 115 RRLHTTHS-----------WDFMGLMGEESMEIPGFSTKNQVN--IIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCES 181 (768)
Q Consensus 115 ~~~~~~~s-----------~~~~g~~~~~~~~~~~~~~~Gg~G--V~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~ 181 (768)
+++..... ...|+++.++++.+|..+ +| +| |+|||||||||++||+|.+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~G-~g~~v~VaViDtGid~~Hp~l~~---------------- 124 (395)
T 2z2z_A 63 AVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSIT-DG-SVSVIQVAVLDTGVDYDHPDLAA---------------- 124 (395)
T ss_dssp EEECCEECC------CCSCCCCHHHHHTTCGGGGGTC-SS-CCTTCEEEEEESCBCTTCTTTGG----------------
T ss_pred ecccCCCCcccccccCccccCCcchhhcCHHHHHhhc-CC-CCCcEEEEEEcCCCCCCChhHhh----------------
Confidence 87643211 234677777888999998 89 99 9999999999999999963
Q ss_pred CCCCccccCCceeEEEEeccCCccccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEe
Q 004205 182 GEAFNASSCNRKVIGARYYMSGYEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIA 261 (768)
Q Consensus 182 ~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~ 261 (768)
++...++|.++.... +..+..|.+||||||||||+|.. ++ . .+.||||+|+|+
T Consensus 125 -----------~~~~~~~~~~~~~~~-------~~~~~~d~~gHGT~vAgiia~~~-n~---~-----g~~GvAp~a~l~ 177 (395)
T 2z2z_A 125 -----------NIAWCVSTLRGKVST-------KLRDCADQNGHGTHVIGTIAALN-ND---I-----GVVGVAPGVQIY 177 (395)
T ss_dssp -----------GEEEEEECGGGCCBC-------CHHHHBCSSSHHHHHHHHHHCCC-SS---S-----SCCCSSTTCEEE
T ss_pred -----------ccccCccccCCcccC-------CCCCCCCCCCCHHHHHHHHHeec-CC---C-----ceEEECCCCEEE
Confidence 234444554331100 00124578999999999999973 21 2 248999999999
Q ss_pred eeeeecCCC-CCHHHHHHHHHHHHHc--------------------CCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCC
Q 004205 262 VYKTCWDSG-CYDVDLLAAFDDAIRD--------------------GVHILSLSLGPEAPQGDYFSDAISIGSFHATSRG 320 (768)
Q Consensus 262 ~~kv~~~~g-~~~~~i~~ai~~a~~~--------------------g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~G 320 (768)
.+|++++.+ +..+++++||+||+++ +++|||||||... ....+..+++++.++|
T Consensus 178 ~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~g 252 (395)
T 2z2z_A 178 SVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA-----DDSYLYDMIIQAYNAG 252 (395)
T ss_dssp EEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC-----CCHHHHHHHHHHHHTT
T ss_pred EEEEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC-----CCHHHHHHHHHHHHCC
Confidence 999998776 7788999999999998 9999999999874 2356778888899999
Q ss_pred cEEEEeccCCCC-CCCcccCCCceEEEcccCCCccceeeEEeCCCceEecccccccccccchhccccccccccccCcccC
Q 004205 321 ILVVASAGNEGN-EGSVTNLAPWMFTIAASSTDRDFTSEIVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQS 399 (768)
Q Consensus 321 i~vV~AAGN~g~-~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 399 (768)
++||+||||+|. ....|+..+++|+|||++.
T Consensus 253 v~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------------------------------------------ 284 (395)
T 2z2z_A 253 IVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS------------------------------------------------ 284 (395)
T ss_dssp CEEEEECCSSCCSSCCBTTTSTTEEEEEEECT------------------------------------------------
T ss_pred CEEEEECCCCCCCCCCCccCCCCEEEEEEecC------------------------------------------------
Confidence 999999999998 6788899999999998531
Q ss_pred CccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhc
Q 004205 400 SYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISH 479 (768)
Q Consensus 400 ~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~ 479 (768)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCceeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHH
Q 004205 480 TSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPDVTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIA 559 (768)
Q Consensus 480 ~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~a 559 (768)
.+.++.||+||| +|+|||++|+|+++. +.|..++|||||||||||++
T Consensus 285 -------------------~~~~a~fS~~G~----------~v~APG~~i~s~~~~----~~y~~~sGTS~AaP~VaG~a 331 (395)
T 2z2z_A 285 -------------------NDNIASFSNRQP----------EVSAPGVDILSTYPD----DSYETLMGTAMATPHVSGVV 331 (395)
T ss_dssp -------------------TSCBCTTSCSSC----------SEEEECSSEEEEETT----TEEEEEESHHHHHHHHHHHH
T ss_pred -------------------CCCCCcccCCCC----------CEEeCCCCeeeecCC----CceEecCCHHHHHHHHHHHH
Confidence 256889999998 679999999999984 56999999999999999999
Q ss_pred HHHHHhCC-------------CCCHHHHHHHHHhhcccccCCCCCccCCCCCCCCCCCcccccccCccccCCC
Q 004205 560 TLIKAVHP-------------SWSPSAIKSAIMTTATALDKNHKPITVDPKGRRGNAFDYGSGFLNPRKVLSP 619 (768)
Q Consensus 560 ALl~q~~p-------------~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 619 (768)
|||+|++| .|++.+||++|++||+++.. ...+..||||+||+.+|++.
T Consensus 332 All~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~------------~g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 332 ALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP------------TGWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSS------------SSSBTTTBTCBCCHHHHHHH
T ss_pred HHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCC------------CCCCCCccCceeCHHHHHHH
Confidence 99999999 99999999999999997532 22456899999999999863
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=3.6e-56 Score=505.93 Aligned_cols=358 Identities=19% Similarity=0.215 Sum_probs=276.5
Q ss_pred CCcEEEEEeCCCCCCCCchhhHhHHHHHHHHhcCcccccccceEEEecceeeEEEEEeCHHHHHHHhc-CCCeEEEEecc
Q 004205 35 SAKVYVVYMGTTTGEDPLDVWRQHHQMLAVVHAGSMEQAQASHVYSYKHGFRGFAAKLTDQQASQIAQ-MPGVVSVFPNM 113 (768)
Q Consensus 35 ~~~~yiV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~L~~-~p~V~~V~~~~ 113 (768)
..+.|||++++.. ...+++++ .+.++.+.|. .|++|+++++++++++|++ +|+|++|++++
T Consensus 43 ~~~~yiv~~~~~~---------~~~~~~~~--------~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~ 104 (471)
T 3t41_A 43 EELYYSVEYKNTA---------TFNKLVKK--------KSLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATC 104 (471)
T ss_dssp CCEEEEEEESCHH---------HHHHHHHH--------HTCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECC
T ss_pred CceEEEEEcCCHH---------HHHHHHHh--------CCCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecc
Confidence 4567999877542 22223332 3467788886 5999999999999999999 99999999998
Q ss_pred eeccCCCCC----------cccccccccCCC-CcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccC
Q 004205 114 KRRLHTTHS----------WDFMGLMGEESM-EIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESG 182 (768)
Q Consensus 114 ~~~~~~~~s----------~~~~g~~~~~~~-~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~ 182 (768)
.+++..... ...|++..+... .+|+.+.+| +||+|||||||||++||+|.+... .
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~~G-~gv~VaViDtGid~~Hp~~~~~~~-------~------ 170 (471)
T 3t41_A 105 STCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLPKH-ANTKIAIIDTGVMKNHDDLKNNFS-------T------ 170 (471)
T ss_dssp SSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCCSS-CCCCEEEEESCCCTTCTTTTTTBC-------T------
T ss_pred eeccccccccccCCCCccccccccHhhccCcHHHHhccCCC-CCcEEEEEeCCCCCCChhHhcCcc-------c------
Confidence 887754321 123555555554 789999999 999999999999999999975311 1
Q ss_pred CCCccccCCceeEEEEeccCCccccc-cccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEe
Q 004205 183 EAFNASSCNRKVIGARYYMSGYEAEE-DIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIA 261 (768)
Q Consensus 183 ~~f~~~~~n~ki~g~~~~~~~~~~~~-~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~ 261 (768)
+.+.+..+..... ......+...+.|..||||||||||+|++ .+.||||+|+|+
T Consensus 171 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g------------~~~GvAp~a~l~ 225 (471)
T 3t41_A 171 -------------DSKNLVPLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANG------------KLIGVAPNNKFT 225 (471)
T ss_dssp -------------TCEECCCTTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBS------------SSBCSSTTSCEE
T ss_pred -------------CCcccccCCCccCCCcccCCCCCCCcCCCCccchhhheeecCC------------ceeEECCCCeEE
Confidence 0111111100000 00001122356789999999999999864 248999999999
Q ss_pred eeeeecCCCCCHHHHHHHHHHHHHcCCcEEEeccCCCCC------CC-----CCchhHHHHHHHHhhcCCcEEEEeccCC
Q 004205 262 VYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGPEAP------QG-----DYFSDAISIGSFHATSRGILVVASAGNE 330 (768)
Q Consensus 262 ~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~------~~-----~~~~~~~~~a~~~a~~~Gi~vV~AAGN~ 330 (768)
.+|++++..+..+++++||+||+++|++|||||||.... .. ....+.+..+++.+.++|++||+||||+
T Consensus 226 ~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~ 305 (471)
T 3t41_A 226 MYRVFGSKKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGND 305 (471)
T ss_dssp EEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSS
T ss_pred EEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 999998877889999999999999999999999997420 00 0234678888999999999999999999
Q ss_pred CC-CC------------------CcccCCCceEEEcccCCCccceeeEEeCCCceEecccccccccccchhccccccccc
Q 004205 331 GN-EG------------------SVTNLAPWMFTIAASSTDRDFTSEIVLGDGANFTGESLSLCKMNASARIISASEAYA 391 (768)
Q Consensus 331 g~-~~------------------~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~ 391 (768)
|. .. ..|+.++++|+|||++.
T Consensus 306 g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~---------------------------------------- 345 (471)
T 3t41_A 306 GIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQ---------------------------------------- 345 (471)
T ss_dssp CCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECT----------------------------------------
T ss_pred CcCCCcccccccccccccCCceeeccccCCCeEEEEeeCC----------------------------------------
Confidence 98 32 26778889999997531
Q ss_pred cccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEEEEEcCCCCCCCccceeeEEEechhhHH
Q 004205 392 GYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGN 471 (768)
Q Consensus 392 ~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~ 471 (768)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCceeeCCce----------------------E
Q 004205 472 KILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPDVTAPGLN----------------------I 529 (768)
Q Consensus 472 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~----------------------I 529 (768)
.+.++.||+|||+. |||+|||++ |
T Consensus 346 ---------------------------~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i 391 (471)
T 3t41_A 346 ---------------------------KSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENI 391 (471)
T ss_dssp ---------------------------TSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSE
T ss_pred ---------------------------CCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCcee
Confidence 25688999999974 599999987 9
Q ss_pred EEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCC-CCCHHHHHHHHHhhcccccCCCCCccCCCCCCCCCCCcccc
Q 004205 530 IAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHP-SWSPSAIKSAIMTTATALDKNHKPITVDPKGRRGNAFDYGS 608 (768)
Q Consensus 530 ~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p-~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~G~ 608 (768)
+++++. +.|..++|||||||||||++|||+|++| .++|++||++|++||.+.. ..++..|||
T Consensus 392 ~s~~~~----~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~-------------~~~~~~~G~ 454 (471)
T 3t41_A 392 LTTANN----GRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKN-------------NKPFSRYGH 454 (471)
T ss_dssp EEECTT----SSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCS-------------CCCHHHHTT
T ss_pred EecCCC----CCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCC-------------CCCcCcccc
Confidence 999874 5699999999999999999999999999 8999999999999999642 145679999
Q ss_pred cccCccccCCCC
Q 004205 609 GFLNPRKVLSPG 620 (768)
Q Consensus 609 G~vn~~~Al~~~ 620 (768)
|++|+.+|++..
T Consensus 455 G~vd~~~Al~~a 466 (471)
T 3t41_A 455 GELDVYKALNVA 466 (471)
T ss_dssp CBBCHHHHTTTT
T ss_pred ChhCHHHHHHHH
Confidence 999999999853
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=2.1e-58 Score=529.90 Aligned_cols=334 Identities=19% Similarity=0.189 Sum_probs=57.6
Q ss_pred cEEEEEeCCCCCCCCchhhHhHHHHHHHHhcCcccccccceEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEEecceec
Q 004205 37 KVYVVYMGTTTGEDPLDVWRQHHQMLAVVHAGSMEQAQASHVYSYKHGFRGFAAKLTDQQASQIAQMPGVVSVFPNMKRR 116 (768)
Q Consensus 37 ~~yiV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~V~~~~~~~ 116 (768)
++|||+||+.... ...+.+.++++... . ......++.+.|++.|+||+++++++++++|+++|+|++|++++.+.
T Consensus 76 g~YIV~lk~~~~~---~~~~~~~~~l~a~~-~-~~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~ 150 (692)
T 2p4e_P 76 GTYVVVLKEETHL---SQSERTARRLQAQA-A-RRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVF 150 (692)
T ss_dssp EEEEEEECTTCCH---HHHHHHHHHHHHHH-H-HTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEE
T ss_pred CcEEEEECCCCCH---HHHHHHHHHHHHHH-h-hcccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccc
Confidence 4999999987531 13334444444332 0 11124578999999999999999999999999999999999999886
Q ss_pred cCCCCCcccccccccCCC----CcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCc
Q 004205 117 LHTTHSWDFMGLMGEESM----EIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNR 192 (768)
Q Consensus 117 ~~~~~s~~~~g~~~~~~~----~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ 192 (768)
.+ ... |++..+... ..|..+.+| +||+|||||||||++||+|.+... |. +|
T Consensus 151 ~~-~~p---WgL~~i~~~~~~~~~w~~~~~G-~GV~VaVIDTGId~~HpdL~gr~~------~~-------~~------- 205 (692)
T 2p4e_P 151 AQ-SIP---WNLERITPPRYRADEYQPPDGG-SLVEVYLLDTSIQSDHREIEGRVM------VT-------DF------- 205 (692)
T ss_dssp EC------------------------------------------------------------------------------
T ss_pred cC-CCC---cchhhcccccccccccccCCCC-CCcEEEEEcCCCCCCChhhcCceE------ec-------cc-------
Confidence 53 223 455443322 368788888 999999999999999999975310 00 01
Q ss_pred eeEEEEeccCCccccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-C
Q 004205 193 KVIGARYYMSGYEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-C 271 (768)
Q Consensus 193 ki~g~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~ 271 (768)
..+.++ +. ......+.|.+||||||||||+|+. .||||+|+|+++||+++.| +
T Consensus 206 -----~~~~d~-dg------~~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g 259 (692)
T 2p4e_P 206 -----ENVPEE-DG------TRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKG 259 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----ccccCC-CC------CcccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCC
Confidence 001000 00 0001245689999999999999864 7999999999999998766 7
Q ss_pred CHHHHHHHHHHHHHc------CCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC--CCCcccCCCce
Q 004205 272 YDVDLLAAFDDAIRD------GVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN--EGSVTNLAPWM 343 (768)
Q Consensus 272 ~~~~i~~ai~~a~~~------g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~--~~~~~~~~p~v 343 (768)
+.+++++||+|++++ +++|||||||+.. ...+..+++++.++|++||+||||+|. ....|+..+++
T Consensus 260 ~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~------s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~v 333 (692)
T 2p4e_P 260 TVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY------SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEV 333 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC------cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCE
Confidence 788999999999986 8999999999752 345677777889999999999999998 44568889999
Q ss_pred EEEcccCCCccceeeEEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecC
Q 004205 344 FTIAASSTDRDFTSEIVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAE 423 (768)
Q Consensus 344 itVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~ 423 (768)
|+|||++.+..
T Consensus 334 ItVGA~d~~~~--------------------------------------------------------------------- 344 (692)
T 2p4e_P 334 ITVGATNAQDQ--------------------------------------------------------------------- 344 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEcCCCC---------------------------------------------------------------------
Confidence 99998643210
Q ss_pred CCchhHHHHHHHHHHcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccc
Q 004205 424 SSTESKLRKSMVVKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVA 503 (768)
Q Consensus 424 ~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 503 (768)
....-+
T Consensus 345 --------------------------------------------------------------------------~a~~ss 350 (692)
T 2p4e_P 345 --------------------------------------------------------------------------PVTLGT 350 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------cccccc
Confidence 000012
Q ss_pred cccCCCCCCCCCCcccCceeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcc
Q 004205 504 AFSSKGPNALNPEILKPDVTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTAT 583 (768)
Q Consensus 504 ~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~ 583 (768)
.||+|||. |||+|||++|+|+++. +.+.|..++|||||||||||++|||+|++|+|+|+|||++|++||.
T Consensus 351 ~fSn~G~~--------vDI~APG~~I~St~~~--~~~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~ 420 (692)
T 2p4e_P 351 LGTNFGRC--------VDLFAPGEDIIGASSD--CSTCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSA 420 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCCCc--------eeEEecCCcEEeeccC--CCCceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcc
Confidence 38999985 4999999999999984 3356999999999999999999999999999999999999999998
Q ss_pred cc
Q 004205 584 AL 585 (768)
Q Consensus 584 ~~ 585 (768)
+.
T Consensus 421 ~~ 422 (692)
T 2p4e_P 421 KD 422 (692)
T ss_dssp --
T ss_pred cc
Confidence 64
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=9.7e-56 Score=511.31 Aligned_cols=367 Identities=24% Similarity=0.275 Sum_probs=278.1
Q ss_pred cCCCCcEEEEEeCCCCCCCCchhhHhHHHHHHHHhcCcccccccceEEEecceeeEEEEEeCH----HHHHHHhc--CCC
Q 004205 32 ICFSAKVYVVYMGTTTGEDPLDVWRQHHQMLAVVHAGSMEQAQASHVYSYKHGFRGFAAKLTD----QQASQIAQ--MPG 105 (768)
Q Consensus 32 ~~~~~~~yiV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~----~~~~~L~~--~p~ 105 (768)
.+..+++|||+||+.. ...++++.+ +.++.+++. .+++++++++. +.+++|++ +|+
T Consensus 27 ~~~~~~~~IV~~k~~~---------~~~~~~~~~--------g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~ 88 (671)
T 1r6v_A 27 GEYTEGKILVGYNDRS---------EVDKIVKAV--------NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKG 88 (671)
T ss_dssp TSBCTTEEEEEESSHH---------HHHHHHHHH--------TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSS
T ss_pred CccCCccEEEEECCCc---------CHHHHHHhc--------CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCC
Confidence 3557899999999752 122233332 346777776 78999999864 34567764 899
Q ss_pred eEEEEecceeccCC----C-----------------------CCcccccccccCCCCc-CCCCCCCCcceEEEEEeCCCC
Q 004205 106 VVSVFPNMKRRLHT----T-----------------------HSWDFMGLMGEESMEI-PGFSTKNQVNIIVGFIDTGIW 157 (768)
Q Consensus 106 V~~V~~~~~~~~~~----~-----------------------~s~~~~g~~~~~~~~~-~~~~~~Gg~GV~VgVIDtGid 157 (768)
|++|||+..+++.. . .....|++..+++..+ |+. .+| +||+|||||||||
T Consensus 89 V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~~a~w~~-~tG-~gV~VAVIDTGVd 166 (671)
T 1r6v_A 89 IRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVTQQLWEE-ASG-TNIIVAVVDTGVD 166 (671)
T ss_dssp EEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCCHHHHHH-CSC-TTCEEEEEESCCB
T ss_pred ceEEecCeEEEeccccccCcccccccccccccccccccccccccccCCchhccCCchhhhhc-cCC-CCCEEEEEeCCCC
Confidence 99999997654321 0 0113467777788888 988 789 9999999999999
Q ss_pred CCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCccccccccccccCCCCCCCCCCcchhhhcccccc
Q 004205 158 PESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGYEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRY 237 (768)
Q Consensus 158 ~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~ 237 (768)
++||+|.+. .+.+...+.+... + ...+..|.+||||||||||||..
T Consensus 167 ~~HpdL~~~--------------------------~~~g~~~~~~~~~-------p-~~~d~~d~~gHGThVAGiIAa~~ 212 (671)
T 1r6v_A 167 GTHPDLEGQ--------------------------VIAGYRPAFDEEL-------P-AGTDSSYGGSAGTHVAGTIAAKK 212 (671)
T ss_dssp TTSGGGTTT--------------------------BCCEEEGGGTEEE-------C-TTCBCCTTCSHHHHHHHHHHCCC
T ss_pred CCCcccccc--------------------------EEecccccCCCcC-------C-CCCCCccCCCcchhhhhhhhccC
Confidence 999999742 1112222211100 0 01234467899999999999974
Q ss_pred cccccccccCCCcceeccCCCcEeeeeeecC------CC-CCHHHHHHHHHHHHHcCCcEEEeccCCCCCCCCCchhHHH
Q 004205 238 VANMNYRGLAAGGARGGAPMARIAVYKTCWD------SG-CYDVDLLAAFDDAIRDGVHILSLSLGPEAPQGDYFSDAIS 310 (768)
Q Consensus 238 ~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~------~g-~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~~ 310 (768)
+ + . .+.||||+|+|+.+|+++. .+ ...+.+++||+||+++|++|||||||... ....+.
T Consensus 213 n-g---~-----gv~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~-----~s~~l~ 278 (671)
T 1r6v_A 213 D-G---K-----GIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG-----YSYTMK 278 (671)
T ss_dssp S-S---S-----SCCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC-----CCHHHH
T ss_pred C-C---C-----ceEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC-----CCHHHH
Confidence 2 1 2 2489999999999999976 22 34567999999999999999999999863 345788
Q ss_pred HHHHHhhcCCcEEEEeccCCCC--CCCcccCCCceEEEcccCCCccceeeEEeCCCceEecccccccccccchhcccccc
Q 004205 311 IGSFHATSRGILVVASAGNEGN--EGSVTNLAPWMFTIAASSTDRDFTSEIVLGDGANFTGESLSLCKMNASARIISASE 388 (768)
Q Consensus 311 ~a~~~a~~~Gi~vV~AAGN~g~--~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~ 388 (768)
.++++|.++|++||+||||+|. ....|+..+++|+|||++.+.
T Consensus 279 ~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g----------------------------------- 323 (671)
T 1r6v_A 279 EAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYG----------------------------------- 323 (671)
T ss_dssp HHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEET-----------------------------------
T ss_pred HHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCC-----------------------------------
Confidence 8888999999999999999998 467788899999999853110
Q ss_pred ccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEEEEEcCCCCCCCccceeeEEEechh
Q 004205 389 AYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKK 468 (768)
Q Consensus 389 ~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~ 468 (768)
T Consensus 324 -------------------------------------------------------------------------------- 323 (671)
T 1r6v_A 324 -------------------------------------------------------------------------------- 323 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCceeeCCceEEEEecCCC-----------
Q 004205 469 TGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPDVTAPGLNIIAAWSPAV----------- 537 (768)
Q Consensus 469 ~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~----------- 537 (768)
....++.|||+||.. ||+|||++|+|+++...
T Consensus 324 -----------------------------~~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~ 366 (671)
T 1r6v_A 324 -----------------------------GTFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENV 366 (671)
T ss_dssp -----------------------------TEEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTC
T ss_pred -----------------------------CceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccc
Confidence 002478999999986 99999999999987421
Q ss_pred ---CCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccccCCCCCccCCCCCCCCCCCcccccccCcc
Q 004205 538 ---GKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATALDKNHKPITVDPKGRRGNAFDYGSGFLNPR 614 (768)
Q Consensus 538 ---~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~G~G~vn~~ 614 (768)
.++.|..++|||||||||||++|||+|++|+|+|.+||++|++||+++... ..+..+|+|++|+.
T Consensus 367 ~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~------------g~d~~~G~G~vna~ 434 (671)
T 1r6v_A 367 PATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGN------------GWDHDTGYGLVKLD 434 (671)
T ss_dssp CCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSS------------SCBTTTBTCBCCHH
T ss_pred cccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCC------------CCCCCcccceeCHH
Confidence 124699999999999999999999999999999999999999999975322 23468999999999
Q ss_pred ccCCCCeeecCCCcch
Q 004205 615 KVLSPGLIYDAQPIDY 630 (768)
Q Consensus 615 ~Al~~~l~~~~~~~~y 630 (768)
+|++..+..+....+|
T Consensus 435 ~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 435 AALQGPLPTQGGVEEF 450 (671)
T ss_dssp HHHHCCCCSSSEEEEE
T ss_pred HHhhhhcCCCCCccce
Confidence 9999777665544444
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=2.6e-55 Score=493.56 Aligned_cols=381 Identities=23% Similarity=0.312 Sum_probs=278.7
Q ss_pred cccccccCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCc
Q 004205 125 FMGLMGEESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGY 204 (768)
Q Consensus 125 ~~g~~~~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~ 204 (768)
.|+++.++++.+|+.+ | +||+|||||||||++||+|.+. .+.+ +.+...
T Consensus 5 ~W~l~~i~~~~~w~~~--g-~gv~VaViDtGvd~~Hp~l~~~--------------------------~~~~-~~~~~~- 53 (441)
T 1y9z_A 5 PWGQTFVGATVLSDSQ--A-GNRTICIIDSGYDRSHNDLNAN--------------------------NVTG-TNNSGT- 53 (441)
T ss_dssp CHHHHHTTCSSSCCTT--G-GGCEEEEEESCCCTTSTTTTTS--------------------------EEEE-CCCTTS-
T ss_pred CCChhhcChhhhhhcC--C-CCcEEEEEcCCCCCCChhHhcC--------------------------cccC-cccCCC-
Confidence 4678888889999875 7 8999999999999999999632 2222 111111
Q ss_pred cccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCC--cEeeeeeecCCC-CCHHHHHHHHH
Q 004205 205 EAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMA--RIAVYKTCWDSG-CYDVDLLAAFD 281 (768)
Q Consensus 205 ~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A--~L~~~kv~~~~g-~~~~~i~~ai~ 281 (768)
.+...+.|..||||||||||+|..+. .| +.||||+| +|+.+|+++..+ +..+++++||+
T Consensus 54 ---------~~~~~~~d~~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~ 115 (441)
T 1y9z_A 54 ---------GNWYQPGNNNAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAID 115 (441)
T ss_dssp ---------CCTTCCCSSCCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEETTEECCSSCHHHHHH
T ss_pred ---------CCCCCCCCCCCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHH
Confidence 11134668899999999999997621 22 48999995 899999998776 77889999999
Q ss_pred HHHHc-CCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-CCCcccCCCceEEEcccCCCccceeeE
Q 004205 282 DAIRD-GVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-EGSVTNLAPWMFTIAASSTDRDFTSEI 359 (768)
Q Consensus 282 ~a~~~-g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~~~~~~~~p~vitVgAs~~~~~~~~~~ 359 (768)
||+++ |++|||||||... ....+..++.++.++|++||+||||+|. ....|+..+++|+|||++.+.......
T Consensus 116 ~a~~~~g~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S 190 (441)
T 1y9z_A 116 TCVNSGGANVVTMSLGGSG-----STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFS 190 (441)
T ss_dssp HHHHTTCCSEEEECCCBSC-----CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTS
T ss_pred HHHHhcCCcEEEeCCCCCC-----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccc
Confidence 99999 9999999999874 2346677888899999999999999998 677889999999999998765432221
Q ss_pred EeCC-------------------Cc----eEecccccc---cc--------cccchhccccccccccccCcccCCccCcC
Q 004205 360 VLGD-------------------GA----NFTGESLSL---CK--------MNASARIISASEAYAGYFTPYQSSYCLES 405 (768)
Q Consensus 360 ~~~~-------------------~~----~~~g~~~~~---~p--------~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 405 (768)
..+. +. .+.|.++.. .| +.+..+.... ........|...
T Consensus 191 ~~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g-------~~~~~~~~C~~~ 263 (441)
T 1y9z_A 191 QYTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINA-------SATGALAECTVN 263 (441)
T ss_dssp CCCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCC-------EEEEEEEEEEEE
T ss_pred cCCCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCcccccccccc-------ccccchhccccc
Confidence 1111 11 111221100 00 0000000000 001122457654
Q ss_pred --CCCCCCCCCeEEEEeecCC--CchhHHHHHHHHHHcCceEEEEEcCCCCC---------CCccceeeEEEechhhHHH
Q 004205 406 --SLNSTKARGKVLVCRHAES--STESKLRKSMVVKEAGGVGMILVDEPGKD---------VAIPFVIPSAVVGKKTGNK 472 (768)
Q Consensus 406 --~~~~~~~~gkivl~~~~~~--g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~---------~~~~~~~p~~~i~~~~g~~ 472 (768)
.++..+++|||++|+|+.. ..+.+.+|..+++++|+.|+|++|+.... ......+|.+.++..+|+.
T Consensus 264 ~~~~~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~ 343 (441)
T 1y9z_A 264 GTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLA 343 (441)
T ss_dssp TTEEECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHH
T ss_pred cccccCCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHH
Confidence 4577899999999996421 12377899999999999999999886542 1234679999999999999
Q ss_pred HHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCceeeCCceEEEEecCCCCCcceEEeccccchh
Q 004205 473 ILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPDVTAPGLNIIAAWSPAVGKMQFNILSGTSMAC 552 (768)
Q Consensus 473 l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSmAa 552 (768)
|++|+.+. + .+ ++.. .+.|..+|||||||
T Consensus 344 l~~~~~~~----~-----------------------------------t~--------~~~~----~~~y~~~sGTSmAa 372 (441)
T 1y9z_A 344 LKAKLGQS----T-----------------------------------TV--------SNQG----NQDYEYYNGTSMAT 372 (441)
T ss_dssp HHTTTTSE----E-----------------------------------EE--------EEEE----EESEEEECSHHHHH
T ss_pred HHHHhcCC----c-----------------------------------cc--------cccc----CCCceeecccccCC
Confidence 99876321 0 11 1111 14699999999999
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccccCCCCCccCCCCCCCCCCCcccccccCccccCCCCeeecCCCcchhh
Q 004205 553 PHVTGIATLIKAVHPSWSPSAIKSAIMTTATALDKNHKPITVDPKGRRGNAFDYGSGFLNPRKVLSPGLIYDAQPIDYTV 632 (768)
Q Consensus 553 P~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~G~G~vn~~~Al~~~l~~~~~~~~y~~ 632 (768)
|||||++|||+|+||+|+|++||++||+||++++..+ ++.+||+|+||+.+|+ ||+.
T Consensus 373 P~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~-----------~~~~ 429 (441)
T 1y9z_A 373 PHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAK-----------AYLD 429 (441)
T ss_dssp HHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHH-----------HHHH
T ss_pred cccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC------------CcccccccccCHHHHH-----------HHHH
Confidence 9999999999999999999999999999999764332 2457999999999996 6899
Q ss_pred hhhccCCC
Q 004205 633 FLCSIGYD 640 (768)
Q Consensus 633 ~~~~~g~~ 640 (768)
|||++++.
T Consensus 430 ~lc~~~~~ 437 (441)
T 1y9z_A 430 ESCTGPTD 437 (441)
T ss_dssp HCTTCC--
T ss_pred hhhcCCCC
Confidence 99998764
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=2.6e-52 Score=440.78 Aligned_cols=267 Identities=27% Similarity=0.349 Sum_probs=219.1
Q ss_pred ccccccccCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCC
Q 004205 124 DFMGLMGEESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSG 203 (768)
Q Consensus 124 ~~~g~~~~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~ 203 (768)
..|++..+++..+|+.+..| +||+|||||||||++||+|.+ +++..++|.++
T Consensus 11 ~~w~l~~i~~~~aw~~~~g~-~gv~VaViDtGvd~~hp~l~~---------------------------~~~~~~~~~~~ 62 (280)
T 1dbi_A 11 YQYGPQNTYTDYAWDVTKGS-SGQEIAVIDTGVDYTHPDLDG---------------------------KVIKGYDFVDN 62 (280)
T ss_dssp HCCTTGGGTHHHHTTTCCCC-TTCEEEEEESCCCTTSTTTTT---------------------------TEEEEEETTTT
T ss_pred CCCChhhcCcHHHHhhcCCC-CCCEEEEEeCCcCCCChhhcc---------------------------CcccceeccCC
Confidence 34677778888999998766 899999999999999999963 24445555443
Q ss_pred ccccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHHHH
Q 004205 204 YEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAFDD 282 (768)
Q Consensus 204 ~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ 282 (768)
. .++.|..||||||||||+|...++. .+.||||+|+|+.+|+++..+ +..+++++||+|
T Consensus 63 ~------------~~~~d~~gHGT~vAgiia~~~~~~~--------g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~ 122 (280)
T 1dbi_A 63 D------------YDPMDLNNHGTHVAGIAAAETNNAT--------GIAGMAPNTRILAVRALDRNGSGTLSDIADAIIY 122 (280)
T ss_dssp B------------SCCCCSSSHHHHHHHHHHCCCSSSS--------SCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHH
T ss_pred C------------CCCCCCCCcHHHHHHHHhCcCCCCC--------cceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHH
Confidence 1 2456889999999999999764332 248999999999999998766 778899999999
Q ss_pred HHHcCCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-CCCcccCCCceEEEcccCCCccceeeEEe
Q 004205 283 AIRDGVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-EGSVTNLAPWMFTIAASSTDRDFTSEIVL 361 (768)
Q Consensus 283 a~~~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~~~~~~~~p~vitVgAs~~~~~~~~~~~~ 361 (768)
|+++|++|||||||... ....+..+++++.++|++||+||||+|. ....|+..+++|+|||++.
T Consensus 123 a~~~g~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~---------- 187 (280)
T 1dbi_A 123 AADSGAEVINLSLGCDC-----HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ---------- 187 (280)
T ss_dssp HHHTTCSEEEECCSSCC-----CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT----------
T ss_pred HHHCCCCEEEeCCCCCC-----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC----------
Confidence 99999999999999874 3467788888999999999999999998 6677888999999997531
Q ss_pred CCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCc
Q 004205 362 GDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGG 441 (768)
Q Consensus 362 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga 441 (768)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCc
Q 004205 442 VGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPD 521 (768)
Q Consensus 442 ~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPD 521 (768)
.+.++.||++||.. |
T Consensus 188 ---------------------------------------------------------~~~~~~~S~~G~~~--------d 202 (280)
T 1dbi_A 188 ---------------------------------------------------------YDRLASFSNYGTWV--------D 202 (280)
T ss_dssp ---------------------------------------------------------TSCBCTTBCCSTTC--------C
T ss_pred ---------------------------------------------------------CCCcCCCCCCCCCc--------e
Confidence 25678999999865 9
Q ss_pred eeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccccCCCCCccCCCCCCCC
Q 004205 522 VTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATALDKNHKPITVDPKGRRG 601 (768)
Q Consensus 522 I~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~ 601 (768)
|+|||++|+++++. +.|..++|||||||||||++|||++ |.+++.|||++|++||+++..
T Consensus 203 v~ApG~~i~s~~~~----~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~-------------- 262 (280)
T 1dbi_A 203 VVAPGVDIVSTITG----NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG-------------- 262 (280)
T ss_dssp EEEECSSEEEEETT----TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT--------------
T ss_pred EEEecCCeEeecCC----CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC--------------
Confidence 99999999999874 5699999999999999999999987 899999999999999997531
Q ss_pred CCCcccccccCccccCC
Q 004205 602 NAFDYGSGFLNPRKVLS 618 (768)
Q Consensus 602 ~~~~~G~G~vn~~~Al~ 618 (768)
....||+|+||+.+|++
T Consensus 263 ~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 263 TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp BTTTBSSEECCHHHHHT
T ss_pred CCCcccCCEECHHHHhc
Confidence 12479999999999985
No 11
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.7e-52 Score=439.48 Aligned_cols=263 Identities=32% Similarity=0.464 Sum_probs=224.5
Q ss_pred cccccccCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCc
Q 004205 125 FMGLMGEESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGY 204 (768)
Q Consensus 125 ~~g~~~~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~ 204 (768)
.|+++.++++.+|..+++| +||+|+|||||| .+||+|+ +...+.|..+.
T Consensus 5 ~W~l~~i~~~~a~~~g~~G-~gv~VaViDtGi-~~h~~l~-----------------------------~~~~~~~~~~~ 53 (269)
T 1gci_A 5 PWGISRVQAPAAHNRGLTG-SGVKVAVLDTGI-STHPDLN-----------------------------IRGGASFVPGE 53 (269)
T ss_dssp CHHHHHTTHHHHHHTTCSC-TTCEEEEEESCC-CCCTTCC-----------------------------EEEEEECSTTC
T ss_pred CcChhhcCcHHHHhcCCCC-CCCEEEEECCCC-CCCHhhc-----------------------------ccCCcccCCCC
Confidence 4677778888999999999 999999999999 8999994 23334443320
Q ss_pred cccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHHHHH
Q 004205 205 EAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAFDDA 283 (768)
Q Consensus 205 ~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai~~a 283 (768)
..+.|..||||||||||+|..+ + . .+.||||+|+|+.+|+++..+ +..+++++||+||
T Consensus 54 ------------~~~~d~~gHGT~vAgiia~~~~-~---~-----~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a 112 (269)
T 1gci_A 54 ------------PSTQDGNGHGTHVAGTIAALNN-S---I-----GVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWA 112 (269)
T ss_dssp ------------CSCSCSSSHHHHHHHHHHCCCS-S---S-----BCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHH
T ss_pred ------------CCCCCCCCChHHHHHHHhcCcC-C---C-----CcEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHH
Confidence 2356889999999999999631 1 2 248999999999999998765 6788999999999
Q ss_pred HHcCCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-CCCcccCCCceEEEcccCCCccceeeEEeC
Q 004205 284 IRDGVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-EGSVTNLAPWMFTIAASSTDRDFTSEIVLG 362 (768)
Q Consensus 284 ~~~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~~~~~~~~p~vitVgAs~~~~~~~~~~~~~ 362 (768)
++++++|||||||... ....+..+++++.++|++||+||||+|. ....|+..+++|+|||++.
T Consensus 113 ~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~----------- 176 (269)
T 1gci_A 113 GNNGMHVANLSLGSPS-----PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ----------- 176 (269)
T ss_dssp HHTTCSEEEECCCBSS-----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT-----------
T ss_pred HHCCCeEEEeCCCCCC-----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC-----------
Confidence 9999999999999874 2457788888999999999999999998 7778888999999997531
Q ss_pred CCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCce
Q 004205 363 DGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGGV 442 (768)
Q Consensus 363 ~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~ 442 (768)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCce
Q 004205 443 GMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPDV 522 (768)
Q Consensus 443 g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI 522 (768)
.+.++.||++||.. ||
T Consensus 177 --------------------------------------------------------~~~~~~~S~~G~~~--------di 192 (269)
T 1gci_A 177 --------------------------------------------------------NNNRASFSQYGAGL--------DI 192 (269)
T ss_dssp --------------------------------------------------------TSCBCTTCCCSTTE--------EE
T ss_pred --------------------------------------------------------CCCCCCCCCCCCCc--------ce
Confidence 24578999999976 99
Q ss_pred eeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccccCCCCCccCCCCCCCCC
Q 004205 523 TAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATALDKNHKPITVDPKGRRGN 602 (768)
Q Consensus 523 ~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~ 602 (768)
+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.|||++|++||+++. +
T Consensus 193 ~APG~~i~s~~~~----~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g---------------~ 253 (269)
T 1gci_A 193 VAPGVNVQSTYPG----STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG---------------S 253 (269)
T ss_dssp EEECSSEEEEETT----TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS---------------C
T ss_pred EecCCCeEeecCC----CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC---------------C
Confidence 9999999999874 56999999999999999999999999999999999999999999652 3
Q ss_pred CCcccccccCccccCC
Q 004205 603 AFDYGSGFLNPRKVLS 618 (768)
Q Consensus 603 ~~~~G~G~vn~~~Al~ 618 (768)
++.||+|+||+.+|++
T Consensus 254 ~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 254 TNLYGSGLVNAEAATR 269 (269)
T ss_dssp HHHHTTCBCCHHHHTC
T ss_pred CCCcccCccCHHHHcC
Confidence 5689999999999985
No 12
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1.5e-52 Score=441.42 Aligned_cols=264 Identities=31% Similarity=0.457 Sum_probs=223.0
Q ss_pred cccccccCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCc
Q 004205 125 FMGLMGEESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGY 204 (768)
Q Consensus 125 ~~g~~~~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~ 204 (768)
.|+++.++++.+|+.+++| +||+|+|||||||++||+|+ +...+.|..+.
T Consensus 5 ~w~l~~i~~~~~~~~g~~G-~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~~ 54 (274)
T 1r0r_E 5 PYGIPLIKADKVQAQGFKG-ANVKVAVLDTGIQASHPDLN-----------------------------VVGGASFVAGE 54 (274)
T ss_dssp CTHHHHTTHHHHHHHTCSC-TTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECSTTC
T ss_pred CCchhhcCCHHHHhcCCCC-CCCEEEEEcCCCCCCCHhHc-----------------------------CCCCccccCCC
Confidence 3677777888999999999 99999999999999999994 22334443320
Q ss_pred cccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHHHHH
Q 004205 205 EAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAFDDA 283 (768)
Q Consensus 205 ~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai~~a 283 (768)
....|..||||||||||+|..+ + ..+.||||+|+|+.+|+++..+ +..+++++||+||
T Consensus 55 ------------~~~~d~~gHGT~vAgiia~~~~-~--------~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a 113 (274)
T 1r0r_E 55 ------------AYNTDGNGHGTHVAGTVAALDN-T--------TGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWA 113 (274)
T ss_dssp ------------CTTCCSSSHHHHHHHHHHCCSS-S--------SBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHH
T ss_pred ------------CCCCCCCCCHHHHHHHHHccCC-C--------CceEEECCCCEEEEEEEECCCCCccHHHHHHHHHHH
Confidence 2346789999999999999631 1 1248999999999999998766 6788999999999
Q ss_pred HHcCCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-C----CCcccCCCceEEEcccCCCccceee
Q 004205 284 IRDGVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-E----GSVTNLAPWMFTIAASSTDRDFTSE 358 (768)
Q Consensus 284 ~~~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~----~~~~~~~p~vitVgAs~~~~~~~~~ 358 (768)
++++++|||||||... ....+..+++++.++|++||+||||+|. . ...|+..+++|+|||++
T Consensus 114 ~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~-------- 180 (274)
T 1r0r_E 114 TTNGMDVINMSLGGAS-----GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-------- 180 (274)
T ss_dssp HHTTCSEEEECEEBSS-----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEEC--------
T ss_pred HHcCCCEEEeCCCCCC-----CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEec--------
Confidence 9999999999999874 2467788888999999999999999997 2 34577788999999743
Q ss_pred EEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHH
Q 004205 359 IVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKE 438 (768)
Q Consensus 359 ~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~ 438 (768)
T Consensus 181 -------------------------------------------------------------------------------- 180 (274)
T 1r0r_E 181 -------------------------------------------------------------------------------- 180 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcc
Q 004205 439 AGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEIL 518 (768)
Q Consensus 439 ~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~ 518 (768)
..+.++.||++||..
T Consensus 181 -----------------------------------------------------------~~~~~~~~S~~G~~~------ 195 (274)
T 1r0r_E 181 -----------------------------------------------------------SNSNRASFSSVGAEL------ 195 (274)
T ss_dssp -----------------------------------------------------------TTSCBCTTCCCSTTE------
T ss_pred -----------------------------------------------------------CCCCcCccCCCCCCc------
Confidence 124678899999865
Q ss_pred cCceeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccccCCCCCccCCCCC
Q 004205 519 KPDVTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATALDKNHKPITVDPKG 598 (768)
Q Consensus 519 KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~ 598 (768)
||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|+++|||++|++||+++.
T Consensus 196 --di~APG~~i~s~~~~----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------------ 257 (274)
T 1r0r_E 196 --EVMAPGAGVYSTYPT----NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG------------ 257 (274)
T ss_dssp --EEEEECSSEEEEETT----TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS------------
T ss_pred --eEEeCCCCeEeecCC----CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC------------
Confidence 999999999999874 56999999999999999999999999999999999999999999642
Q ss_pred CCCCCCcccccccCccccCC
Q 004205 599 RRGNAFDYGSGFLNPRKVLS 618 (768)
Q Consensus 599 ~~~~~~~~G~G~vn~~~Al~ 618 (768)
++..||+|++|+.+|++
T Consensus 258 ---~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 ---SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp ---CHHHHTTCBCCHHHHTC
T ss_pred ---CCCCcccCccCHHHHhC
Confidence 35689999999999985
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=4.7e-52 Score=439.05 Aligned_cols=266 Identities=30% Similarity=0.442 Sum_probs=223.8
Q ss_pred cccccccCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCc
Q 004205 125 FMGLMGEESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGY 204 (768)
Q Consensus 125 ~~g~~~~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~ 204 (768)
.|+++.+++..+|..+++| +||+|||||||||++||+|+ +...+.|..+.
T Consensus 5 ~w~l~~i~~~~~~~~g~~G-~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~~ 54 (281)
T 1to2_E 5 PYGVSQIKAPALHSQGYTG-SNVKVAVIDSGIDSSHPDLK-----------------------------VAGGASMVPSE 54 (281)
T ss_dssp CHHHHHTTHHHHHHHTCSC-TTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECCTTC
T ss_pred CcchhhcChHHHHhcCCCC-CCCEEEEEcCCCCCCCHHHc-----------------------------CcCCccccCCC
Confidence 4677778888999999999 99999999999999999994 22333343220
Q ss_pred cccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHHHHH
Q 004205 205 EAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAFDDA 283 (768)
Q Consensus 205 ~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai~~a 283 (768)
.....|..||||||||||+|..+ + ..+.||||+|+|+.+|+++..+ +..+++++||+||
T Consensus 55 -----------~~~~~d~~gHGT~vAgiia~~~~-~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a 114 (281)
T 1to2_E 55 -----------TNPFQDNNSHGTHVAGTVAALNN-S--------IGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWA 114 (281)
T ss_dssp -----------CCTTCCSSSHHHHHHHHHHCCSS-S--------SSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHH
T ss_pred -----------CCCCCCCCCcHHHHHHHHhccCC-C--------CcceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHH
Confidence 01235789999999999999641 1 1248999999999999998766 6788999999999
Q ss_pred HHcCCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-C----CCcccCCCceEEEcccCCCccceee
Q 004205 284 IRDGVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-E----GSVTNLAPWMFTIAASSTDRDFTSE 358 (768)
Q Consensus 284 ~~~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~----~~~~~~~p~vitVgAs~~~~~~~~~ 358 (768)
++++++|||||||... ....+..+++++.++|++||+||||+|. . ...|+..+++|+|||++
T Consensus 115 ~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~-------- 181 (281)
T 1to2_E 115 IANNMDVINMSLGGPS-----GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVD-------- 181 (281)
T ss_dssp HHTTCSEEEECEEBSC-----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEEC--------
T ss_pred HHCCCcEEEECCcCCC-----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEec--------
Confidence 9999999999999874 2467888888999999999999999987 2 34577788999999743
Q ss_pred EEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHH
Q 004205 359 IVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKE 438 (768)
Q Consensus 359 ~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~ 438 (768)
T Consensus 182 -------------------------------------------------------------------------------- 181 (281)
T 1to2_E 182 -------------------------------------------------------------------------------- 181 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcc
Q 004205 439 AGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEIL 518 (768)
Q Consensus 439 ~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~ 518 (768)
..+.++.||++||..
T Consensus 182 -----------------------------------------------------------~~~~~~~fS~~G~~~------ 196 (281)
T 1to2_E 182 -----------------------------------------------------------SSNQRASFSSVGPEL------ 196 (281)
T ss_dssp -----------------------------------------------------------TTSCBCTTCCCSTTC------
T ss_pred -----------------------------------------------------------CCCCcCCcCCCCCCc------
Confidence 125678999999965
Q ss_pred cCceeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccccCCCCCccCCCCC
Q 004205 519 KPDVTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATALDKNHKPITVDPKG 598 (768)
Q Consensus 519 KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~ 598 (768)
||+|||++|+++++. +.|..++|||||||+|||++|||+|++|+|+++|||++|++||+++.
T Consensus 197 --di~APG~~i~s~~~~----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------------ 258 (281)
T 1to2_E 197 --DVMAPGVSIQSTLPG----NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG------------ 258 (281)
T ss_dssp --CEEEECSSEEEEETT----TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS------------
T ss_pred --eEEecCCCeEeecCC----CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC------------
Confidence 999999999999874 56999999999999999999999999999999999999999999642
Q ss_pred CCCCCCcccccccCccccCCC
Q 004205 599 RRGNAFDYGSGFLNPRKVLSP 619 (768)
Q Consensus 599 ~~~~~~~~G~G~vn~~~Al~~ 619 (768)
+++.||||+||+.+|+++
T Consensus 259 ---~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 ---DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp ---CHHHHTTCBCCHHHHTSS
T ss_pred ---CCCCcccceecHHHHhhh
Confidence 356899999999999985
No 14
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1.2e-51 Score=435.80 Aligned_cols=266 Identities=28% Similarity=0.399 Sum_probs=224.4
Q ss_pred ccccccccCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCC
Q 004205 124 DFMGLMGEESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSG 203 (768)
Q Consensus 124 ~~~g~~~~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~ 203 (768)
..|+++.+++..+|+.. +| +||+|||||||||++||+|.+ ++...++|.++
T Consensus 11 ~~w~l~~i~~~~aw~~~-~G-~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~~ 61 (279)
T 1thm_A 11 RQYGPQKIQAPQAWDIA-EG-SGAKIAIVDTGVQSNHPDLAG---------------------------KVVGGWDFVDN 61 (279)
T ss_dssp HCCHHHHTTHHHHHTTC-CC-TTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEETTTT
T ss_pred cccChhhCChHHHHhcC-CC-CCCEEEEEccCCCCCCcchhc---------------------------CccccccccCC
Confidence 34677778888999987 68 999999999999999999963 34445555443
Q ss_pred ccccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHHHH
Q 004205 204 YEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAFDD 282 (768)
Q Consensus 204 ~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ 282 (768)
. ..+.|..||||||||||+|...++. .+.||||+|+|+.+|+++..+ ++.+++++||+|
T Consensus 62 ~------------~~~~d~~gHGT~vAgiia~~~~n~~--------g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~ 121 (279)
T 1thm_A 62 D------------STPQNGNGHGTHCAGIAAAVTNNST--------GIAGTAPKASILAVRVLDNSGSGTWTAVANGITY 121 (279)
T ss_dssp B------------SCCCCSSSHHHHHHHHHHCCCSSSS--------SCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHH
T ss_pred C------------CCCCCCCCcHHHHHHHHhCccCCCC--------ccEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHH
Confidence 1 2456889999999999999764332 248999999999999998766 778899999999
Q ss_pred HHHcCCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-CCCcccCCCceEEEcccCCCccceeeEEe
Q 004205 283 AIRDGVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-EGSVTNLAPWMFTIAASSTDRDFTSEIVL 361 (768)
Q Consensus 283 a~~~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~~~~~~~~p~vitVgAs~~~~~~~~~~~~ 361 (768)
|+++|++|||||||... ..+.+..+++++.++|++||+||||+|. ....|+..+++|+|||++.
T Consensus 122 a~~~g~~Vin~S~G~~~-----~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~---------- 186 (279)
T 1thm_A 122 AADQGAKVISLSLGGTV-----GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ---------- 186 (279)
T ss_dssp HHHTTCSEEEECCCBSS-----CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT----------
T ss_pred HHHCCCCEEEEecCCCC-----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC----------
Confidence 99999999999999874 3467788888999999999999999998 6677888899999997531
Q ss_pred CCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCc
Q 004205 362 GDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGG 441 (768)
Q Consensus 362 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga 441 (768)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCc
Q 004205 442 VGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPD 521 (768)
Q Consensus 442 ~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPD 521 (768)
.+.++.||++||.. |
T Consensus 187 ---------------------------------------------------------~~~~~~fS~~G~~~--------d 201 (279)
T 1thm_A 187 ---------------------------------------------------------NDNKSSFSTYGSWV--------D 201 (279)
T ss_dssp ---------------------------------------------------------TSCBCTTCCCCTTC--------C
T ss_pred ---------------------------------------------------------CCCcCCcCCCCCce--------E
Confidence 24678999999875 9
Q ss_pred eeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccccCCCCCccCCCCCCCC
Q 004205 522 VTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATALDKNHKPITVDPKGRRG 601 (768)
Q Consensus 522 I~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~ 601 (768)
|+|||++|+++++. +.|..++|||||||||||++||| ++|.+++++||++|++||+++...
T Consensus 202 v~APG~~i~s~~~~----~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~------------- 262 (279)
T 1thm_A 202 VAAPGSSIYSTYPT----STYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT------------- 262 (279)
T ss_dssp EEEECSSEEEEETT----TEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB-------------
T ss_pred EEEcCCCeEEEeCC----CCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC-------------
Confidence 99999999999874 56999999999999999999999 579999999999999999975321
Q ss_pred CCCcccccccCccccCC
Q 004205 602 NAFDYGSGFLNPRKVLS 618 (768)
Q Consensus 602 ~~~~~G~G~vn~~~Al~ 618 (768)
...||+|+||+.+|++
T Consensus 263 -~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 263 -GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp -TTTBSSEECCHHHHHH
T ss_pred -CccccCCeeCHHHHhc
Confidence 1478999999999974
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=7e-52 Score=446.99 Aligned_cols=273 Identities=28% Similarity=0.366 Sum_probs=224.2
Q ss_pred ccccccccCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCC
Q 004205 124 DFMGLMGEESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSG 203 (768)
Q Consensus 124 ~~~g~~~~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~ 203 (768)
..|+++.++++.+|+.+++| +||+|||||||||++||+|.+ ++.+.++|..+
T Consensus 21 ~~w~l~~i~~~~aw~~~~~G-~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~~~~ 72 (327)
T 2x8j_A 21 VPMGVEIVEAPAVWRASAKG-AGQIIGVIDTGCQVDHPDLAE---------------------------RIIGGVNLTTD 72 (327)
T ss_dssp CCHHHHHTTHHHHHHHHGGG-TTCEEEEEESCCCTTCTTTGG---------------------------GEEEEEECSSG
T ss_pred cCcchhhcChHHHHhcCCCC-CCCEEEEEcCCCCCCChhHhh---------------------------cccCCccccCC
Confidence 34788878888999999999 999999999999999999952 35555666554
Q ss_pred ccccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHHHH
Q 004205 204 YEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAFDD 282 (768)
Q Consensus 204 ~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai~~ 282 (768)
+... .....|..||||||||||+|..+ + ..+.||||+|+|+.+|+++..+ +..+++++||+|
T Consensus 73 ~~~~--------~~~~~d~~gHGT~VAgiia~~~~-~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~ 135 (327)
T 2x8j_A 73 YGGD--------ETNFSDNNGHGTHVAGTVAAAET-G--------SGVVGVAPKADLFIIKALSGDGSGEMGWIAKAIRY 135 (327)
T ss_dssp GGGC--------TTCCCCSSSHHHHHHHHHHCCCC-S--------SBCCCSSTTCEEEEEECSCTTSEECHHHHHHHHHH
T ss_pred CCCC--------CCCCCCCCCchHHHHHHHhccCC-C--------CCcEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHH
Confidence 3211 12356889999999999999742 1 1248999999999999998766 778899999999
Q ss_pred HHH------cCCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-C-----CCcccCCCceEEEcccC
Q 004205 283 AIR------DGVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-E-----GSVTNLAPWMFTIAASS 350 (768)
Q Consensus 283 a~~------~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~-----~~~~~~~p~vitVgAs~ 350 (768)
|++ .+++|||||||... ....+..+++++.++|++||+||||+|. . ...|+..+++|+|||++
T Consensus 136 a~~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~ 210 (327)
T 2x8j_A 136 AVDWRGPKGEQMRIITMSLGGPT-----DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVD 210 (327)
T ss_dssp HHHCCCTTSCCCSEEEECEEBSC-----CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEEC
T ss_pred HHhhcccccCCceEEEECCCcCC-----CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEEC
Confidence 999 89999999999874 2467788888999999999999999997 2 35677889999999753
Q ss_pred CCccceeeEEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHH
Q 004205 351 TDRDFTSEIVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKL 430 (768)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~ 430 (768)
.
T Consensus 211 ~------------------------------------------------------------------------------- 211 (327)
T 2x8j_A 211 F------------------------------------------------------------------------------- 211 (327)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHHHHHHcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCC
Q 004205 431 RKSMVVKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGP 510 (768)
Q Consensus 431 ~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp 510 (768)
.+.++.||++||
T Consensus 212 --------------------------------------------------------------------~~~~~~fS~~G~ 223 (327)
T 2x8j_A 212 --------------------------------------------------------------------DLRLSDFTNTNE 223 (327)
T ss_dssp --------------------------------------------------------------------TCCBSCC---CC
T ss_pred --------------------------------------------------------------------CCCCCCccCCCC
Confidence 256789999998
Q ss_pred CCCCCCcccCceeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHh-----CCCCCHHHHHHHHHhhcccc
Q 004205 511 NALNPEILKPDVTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAV-----HPSWSPSAIKSAIMTTATAL 585 (768)
Q Consensus 511 ~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~p~lsp~~ik~~L~~TA~~~ 585 (768)
.. ||+|||++|+++++. +.|..++|||||||+|||++|||+|+ +|.+++.+||++|++||+++
T Consensus 224 ~~--------di~APG~~i~s~~~~----~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~ 291 (327)
T 2x8j_A 224 EI--------DIVAPGVGIKSTYLD----SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPI 291 (327)
T ss_dssp CC--------SEEEECSSEEEECST----TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECC
T ss_pred Cc--------eEecCcCceEeecCC----CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccC
Confidence 65 999999999999874 46999999999999999999999999 99999999999999999964
Q ss_pred cCCCCCccCCCCCCCCCCCcccccccCccccCCC
Q 004205 586 DKNHKPITVDPKGRRGNAFDYGSGFLNPRKVLSP 619 (768)
Q Consensus 586 ~~~g~p~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 619 (768)
. .++..+|+|++|+.+|++.
T Consensus 292 g--------------~~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 292 G--------------FTAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp S--------------SCHHHHTTCEECTTHHHHH
T ss_pred C--------------CCCCceeeeEECHHHHHHh
Confidence 2 2456899999999999973
No 16
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=1.4e-50 Score=434.88 Aligned_cols=288 Identities=30% Similarity=0.396 Sum_probs=230.5
Q ss_pred cccccccCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCc
Q 004205 125 FMGLMGEESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGY 204 (768)
Q Consensus 125 ~~g~~~~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~ 204 (768)
.|+++.++++.+|..+.+| +||+|||||||||++||+|.+ ++...++|..+.
T Consensus 7 ~W~l~~i~~~~~w~~~~~G-~gv~VaViDtGvd~~H~~l~~---------------------------~~~~~~~~~~~~ 58 (310)
T 2ixt_A 7 PWGIKAIYNNDTLTSTTGG-SGINIAVLDTGVNTSHPDLVN---------------------------NVEQCKDFTGAT 58 (310)
T ss_dssp CHHHHHHHTCTTCCCCCCC-TTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEESSSSS
T ss_pred CCchhhcCchhhhhccCCC-CCcEEEEEecCCCCCCHHHhh---------------------------cccccccccCCC
Confidence 4677777888999999999 999999999999999999963 234445554431
Q ss_pred cccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHHHHH
Q 004205 205 EAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAFDDA 283 (768)
Q Consensus 205 ~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai~~a 283 (768)
. .......|..||||||||||+|....+ ...+.||||+|+|+.+|++.+.+ +..+++++||+||
T Consensus 59 ~--------~~~~~~~d~~gHGT~vAgiia~~~~~n-------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a 123 (310)
T 2ixt_A 59 T--------PINNSCTDRNGHGTHVAGTALADGGSD-------QAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHA 123 (310)
T ss_dssp S--------CEETCCCCSSSHHHHHHHHHHCBCCTT-------SCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHH
T ss_pred C--------CCCCCCCCCCCCHHHHHHHHhccCCCC-------CCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHH
Confidence 1 011235688999999999999875221 12348999999999999998766 6788999999999
Q ss_pred HHcCC-----cEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC---CCCcccCCCceEEEcccCCCccc
Q 004205 284 IRDGV-----HILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN---EGSVTNLAPWMFTIAASSTDRDF 355 (768)
Q Consensus 284 ~~~g~-----dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~---~~~~~~~~p~vitVgAs~~~~~~ 355 (768)
+++++ +|||||||... ....+..+++++.++|++||+||||+|. ....|+..+++|+|||++...
T Consensus 124 ~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~-- 196 (310)
T 2ixt_A 124 ADQATATGTKTIISMSLGSSA-----NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ-- 196 (310)
T ss_dssp HHHHHHHTCCEEEEECCCBSS-----CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE--
T ss_pred HHhhhccCCCeEEEEcCCCCC-----CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc--
Confidence 99987 99999999874 2467788888999999999999999997 345678889999999853100
Q ss_pred eeeEEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHH
Q 004205 356 TSEIVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMV 435 (768)
Q Consensus 356 ~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~ 435 (768)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCC--ccccccCCCCCCC
Q 004205 436 VKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAP--RVAAFSSKGPNAL 513 (768)
Q Consensus 436 ~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSs~Gp~~~ 513 (768)
..+ .++.||++||...
T Consensus 197 --------------------------------------------------------------~~g~~~~~~~S~~G~~~~ 214 (310)
T 2ixt_A 197 --------------------------------------------------------------QNGTYRVADYSSRGYIST 214 (310)
T ss_dssp --------------------------------------------------------------ETTEEEECTTSCCCCTTT
T ss_pred --------------------------------------------------------------cCCCeeeccccCCCCccC
Confidence 012 5788999999542
Q ss_pred C----CCcccCceeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccccCCC
Q 004205 514 N----PEILKPDVTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATALDKNH 589 (768)
Q Consensus 514 ~----~~~~KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g 589 (768)
. ..+.||||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++++||++|++||++++..+
T Consensus 215 ~g~~~~~~~~~di~ApG~~i~s~~~~----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~ 290 (310)
T 2ixt_A 215 AGDYVIQEGDIEISAPGSSVYSTWYN----GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKG 290 (310)
T ss_dssp TTSSSCCTTCCCEEEECSSEEEECTT----SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCB
T ss_pred CccccccCCCeeEECCCCCEeeecCC----CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCC
Confidence 1 123599999999999999874 46999999999999999999999999999999999999999999875332
Q ss_pred CCccCCCCCCCCCCCcccccccCc
Q 004205 590 KPITVDPKGRRGNAFDYGSGFLNP 613 (768)
Q Consensus 590 ~p~~~~~~~~~~~~~~~G~G~vn~ 613 (768)
. ......++..+|||++|+
T Consensus 291 ~-----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 291 G-----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp S-----TTCCSSSBTTTBTCBCCC
T ss_pred C-----cccccCCccccccceeec
Confidence 1 123456778999999986
No 17
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=3.4e-53 Score=463.11 Aligned_cols=304 Identities=20% Similarity=0.220 Sum_probs=196.9
Q ss_pred CcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCccccccc-ccc
Q 004205 135 EIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGYEAEEDI-VET 213 (768)
Q Consensus 135 ~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~-~~~ 213 (768)
++|+++..| ++|+|||||||||++||+|++....+....|+..++........ .+..+.. . ...+....... ...
T Consensus 22 ~~w~~~~g~-~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~~~~~~~~~ 97 (357)
T 4h6x_A 22 DLHNQTLGD-PQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYA-AFQSIRD-Q-GLKGKEKEEALEAVI 97 (357)
T ss_dssp HHHHHCSCC-TTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHH-HHHHHHH-H-TCCSHHHHHHHHHHC
T ss_pred HHHHhcCCC-CCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCccccc-ccccccC-c-ccccccccccccccc
Confidence 799998877 99999999999999999998776666666676655432110000 0000000 0 00000000000 000
Q ss_pred ccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC------CCHHHHHHHHHHHHHcC
Q 004205 214 VSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG------CYDVDLLAAFDDAIRDG 287 (768)
Q Consensus 214 ~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g------~~~~~i~~ai~~a~~~g 287 (768)
.+..++.|.+||||||||||||+..+ .+.||||+|+|+.+|++.... ....++++||+||++.|
T Consensus 98 ~~~~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g 167 (357)
T 4h6x_A 98 PDTKDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELG 167 (357)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTT
T ss_pred CCCCCCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcC
Confidence 01123456789999999999997522 348999999999999975322 33467899999999999
Q ss_pred CcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-CCCcccCCCceEEEcccCCCccceeeEEeCCCce
Q 004205 288 VHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-EGSVTNLAPWMFTIAASSTDRDFTSEIVLGDGAN 366 (768)
Q Consensus 288 ~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~ 366 (768)
++|||||||... ......+.+..++.++.++|++||+||||+|. ....|+..+++|+|||++
T Consensus 168 ~~Vin~S~G~~~-~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~---------------- 230 (357)
T 4h6x_A 168 ANIIHCAFCRPT-QTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAK---------------- 230 (357)
T ss_dssp CSEEEEC------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEEC----------------
T ss_pred CCEEeeccccCC-ccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEec----------------
Confidence 999999999875 22345567888889999999999999999998 777888899999999853
Q ss_pred EecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEEEE
Q 004205 367 FTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGMIL 446 (768)
Q Consensus 367 ~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~ 446 (768)
T Consensus 231 -------------------------------------------------------------------------------- 230 (357)
T 4h6x_A 231 -------------------------------------------------------------------------------- 230 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCceeeCC
Q 004205 447 VDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPDVTAPG 526 (768)
Q Consensus 447 ~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG 526 (768)
..+.++.|||||+.. .||||+|||
T Consensus 231 ---------------------------------------------------~~~~~~~fSn~G~~~-----~~~di~APG 254 (357)
T 4h6x_A 231 ---------------------------------------------------VDGTPCHFSNWGGNN-----TKEGILAPG 254 (357)
T ss_dssp ---------------------------------------------------TTSSBCTTCC---CT-----TTTEEEEEC
T ss_pred ---------------------------------------------------cCCcccccccCCCCC-----CccceeecC
Confidence 125678999999754 589999999
Q ss_pred ceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHH----hCCCCCHHHHHHHHHhhcccccCCCCCccCCCCCCCCC
Q 004205 527 LNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKA----VHPSWSPSAIKSAIMTTATALDKNHKPITVDPKGRRGN 602 (768)
Q Consensus 527 ~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~ 602 (768)
++|+|+++. ++.|..++|||||||||||++|||++ ++|.|+++|||++|++||++++. .....
T Consensus 255 ~~i~s~~~~---~~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~----------~~~~~ 321 (357)
T 4h6x_A 255 EEILGAQPC---TEEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDP----------EVVEE 321 (357)
T ss_dssp SSEEECCTT---CSCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC---------------------
T ss_pred CCeEeccCC---CCcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCC----------CCCCC
Confidence 999999874 24578899999999999999999995 46789999999999999997632 12334
Q ss_pred CCcccccccCccccCC
Q 004205 603 AFDYGSGFLNPRKVLS 618 (768)
Q Consensus 603 ~~~~G~G~vn~~~Al~ 618 (768)
+.+||+|+||+.+|++
T Consensus 322 ~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 322 PERCLRGFVNIPGAMK 337 (357)
T ss_dssp ---CTTCBCCHHHHHH
T ss_pred cccceeEEecHHHHHH
Confidence 5689999999999997
No 18
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=5.9e-51 Score=439.20 Aligned_cols=273 Identities=26% Similarity=0.394 Sum_probs=224.8
Q ss_pred ccccccccCCCCcCCCCCCCCc--ceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEecc
Q 004205 124 DFMGLMGEESMEIPGFSTKNQV--NIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYM 201 (768)
Q Consensus 124 ~~~g~~~~~~~~~~~~~~~Gg~--GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~ 201 (768)
..|+++.++++.+|+.+ +| + ||+|||||||||++||+|.+ ++...++|.
T Consensus 8 ~~W~l~~i~~~~aw~~~-~G-~~~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~~ 58 (320)
T 2z30_A 8 IPWGIERVKAPSVWSIT-DG-SVSVIQVAVLDTGVDYDHPDLAA---------------------------NIAWCVSTL 58 (320)
T ss_dssp CCHHHHHTTCGGGTTTC-CS-CCTTCEEEEEESCBCTTCTTTGG---------------------------GEEEEEECG
T ss_pred CCCChhhcChHHHHHhc-CC-CcCCeEEEEECCCCCCCChhHhc---------------------------ccccCcccc
Confidence 34678888899999998 88 9 99999999999999999963 233444444
Q ss_pred CCccccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHH
Q 004205 202 SGYEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAF 280 (768)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai 280 (768)
.+.... +.....|..||||||||||+|.. ++ . .+.||||+|+|+.+|+++..+ +..+++++||
T Consensus 59 ~~~~~~-------~~~~~~d~~gHGT~vAgiia~~~-n~---~-----g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai 122 (320)
T 2z30_A 59 RGKVST-------KLRDCADQNGHGTHVIGTIAALN-ND---I-----GVVGVAPGVQIYSVRVLDARGSGSYSDIAIGI 122 (320)
T ss_dssp GGCCBC-------CHHHHBCSSSHHHHHHHHHHCCS-SS---B-----SCCCSSTTCEEEEEECSCTTSEEEHHHHHHHH
T ss_pred CCccCC-------CCCCCCCCCCCHHHHHHHHHccc-CC---C-----ceEeeCCCCEEEEEEeeCCCCCccHHHHHHHH
Confidence 321100 00123578899999999999963 11 2 248999999999999998766 6778999999
Q ss_pred HHHHHc--------------------CCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-CCCcccC
Q 004205 281 DDAIRD--------------------GVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-EGSVTNL 339 (768)
Q Consensus 281 ~~a~~~--------------------g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~~~~~~~ 339 (768)
+||+++ +++|||||||... ....+..+++++.++|++||+||||+|. ....|+.
T Consensus 123 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~ 197 (320)
T 2z30_A 123 EQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA-----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAA 197 (320)
T ss_dssp HHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC-----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTT
T ss_pred HHHHhCcccccccccccccccccccCCceEEEecCCCCC-----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCccc
Confidence 999987 9999999999874 2456777888899999999999999998 7778889
Q ss_pred CCceEEEcccCCCccceeeEEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEE
Q 004205 340 APWMFTIAASSTDRDFTSEIVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVC 419 (768)
Q Consensus 340 ~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~ 419 (768)
.+++|+|||++.
T Consensus 198 ~~~vi~Vga~~~-------------------------------------------------------------------- 209 (320)
T 2z30_A 198 YPEVIAVGAIDS-------------------------------------------------------------------- 209 (320)
T ss_dssp STTEEEEEEECT--------------------------------------------------------------------
T ss_pred CCCeEEEEeeCC--------------------------------------------------------------------
Confidence 999999998531
Q ss_pred eecCCCchhHHHHHHHHHHcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCC
Q 004205 420 RHAESSTESKLRKSMVVKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPA 499 (768)
Q Consensus 420 ~~~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~ 499 (768)
.
T Consensus 210 -------------------------------------------------------------------------------~ 210 (320)
T 2z30_A 210 -------------------------------------------------------------------------------N 210 (320)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------C
Confidence 2
Q ss_pred CccccccCCCCCCCCCCcccCceeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhC-------------
Q 004205 500 PRVAAFSSKGPNALNPEILKPDVTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVH------------- 566 (768)
Q Consensus 500 ~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~------------- 566 (768)
+.++.||++|| +|+|||++|+++++. +.|..++|||||||||||++|||+|++
T Consensus 211 ~~~~~~S~~g~----------~v~APG~~i~s~~~~----~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~ 276 (320)
T 2z30_A 211 DNIASFSNRQP----------EVSAPGVDILSTYPD----DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTF 276 (320)
T ss_dssp SCBCTTSCSSC----------SEEEECSSEEEEETT----TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCT
T ss_pred CCcCcccCCCC----------CEEeCCCCeEEeccC----CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccC
Confidence 56789999997 789999999999874 569999999999999999999999998
Q ss_pred CCCCHHHHHHHHHhhcccccCCCCCccCCCCCCCCCCCcccccccCccccCCC
Q 004205 567 PSWSPSAIKSAIMTTATALDKNHKPITVDPKGRRGNAFDYGSGFLNPRKVLSP 619 (768)
Q Consensus 567 p~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 619 (768)
|.|++.+||++|++||+++.. +.++..||+|+||+.+|++.
T Consensus 277 p~lt~~~v~~~L~~ta~~~~~------------~g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 277 DDISKNTVRGILHITADDLGP------------TGWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp TCCSTTSHHHHHHHHSBCCSS------------SSSBTTTBTCBCCHHHHHHH
T ss_pred CCCCHHHHHHHHHhhCccCCC------------CCCCCCcCCceeCHHHHHHH
Confidence 999999999999999997532 22456899999999999863
No 19
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=4.4e-51 Score=432.84 Aligned_cols=264 Identities=24% Similarity=0.274 Sum_probs=209.4
Q ss_pred CCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCccccccccccccCCCCC
Q 004205 141 TKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGYEAEEDIVETVSFRSPR 220 (768)
Q Consensus 141 ~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~ 220 (768)
.+|.+||+|||||||||++||+|.+. .+.+..++..+ ......
T Consensus 4 l~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~-----------~~~~d~ 46 (282)
T 3zxy_A 4 LKGDHNIRVAILDGPVDIAHPCFQGA--------------------------DLTVLPTLAPT-----------AARSDG 46 (282)
T ss_dssp CCCCTTSEEEEEESCCCTTSGGGTTC--------------------------EEEECCCSSCC-----------CCCTTC
T ss_pred CcCCCCCEEEEEcCCCCCCChhHCCC--------------------------eeecCcCCCCC-----------CCCCCC
Confidence 45647999999999999999999642 12221111111 012233
Q ss_pred CCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC--CCHHHHHHHHHHHHHcCCcEEEeccCCC
Q 004205 221 DSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG--CYDVDLLAAFDDAIRDGVHILSLSLGPE 298 (768)
Q Consensus 221 D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVIN~SlG~~ 298 (768)
|.+||||||||||+|+..+ .+.||||+|+|+.+|++.+.+ .+..++++||+||++++++|||||||..
T Consensus 47 ~~~gHGT~VAGiiag~~~~----------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~ 116 (282)
T 3zxy_A 47 FMSAHGTHVASIIFGQPET----------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGEL 116 (282)
T ss_dssp HHHHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEE
T ss_pred CCCCcccceeehhhccCCc----------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCccc
Confidence 4678999999999987532 248999999999999986543 6778899999999999999999999976
Q ss_pred CCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-CCCcccCCCceEEEcccCCCccceeeEEeCCCceEeccccccccc
Q 004205 299 APQGDYFSDAISIGSFHATSRGILVVASAGNEGN-EGSVTNLAPWMFTIAASSTDRDFTSEIVLGDGANFTGESLSLCKM 377 (768)
Q Consensus 299 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~p~ 377 (768)
. ........+..++..+.++|+++|+||||+|. ....|+..+++|+|||++
T Consensus 117 ~-~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~--------------------------- 168 (282)
T 3zxy_A 117 T-DFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMD--------------------------- 168 (282)
T ss_dssp E-SSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEEC---------------------------
T ss_pred c-ccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEc---------------------------
Confidence 4 22234567788888999999999999999998 777888899999999743
Q ss_pred ccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEEEEEcCCCCCCCcc
Q 004205 378 NASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGMILVDEPGKDVAIP 457 (768)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~ 457 (768)
T Consensus 169 -------------------------------------------------------------------------------- 168 (282)
T 3zxy_A 169 -------------------------------------------------------------------------------- 168 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCceeeCCceEEEEecCCC
Q 004205 458 FVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPDVTAPGLNIIAAWSPAV 537 (768)
Q Consensus 458 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~ 537 (768)
..+.++.||+||+. ..||||+|||++|+++++.
T Consensus 169 ----------------------------------------~~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~-- 201 (282)
T 3zxy_A 169 ----------------------------------------DHGHPLDFSNWGST-----YEQQGILAPGEDILGAKPG-- 201 (282)
T ss_dssp ----------------------------------------TTSCBCSSSCCCHH-----HHHHEEEEECSSEEEECTT--
T ss_pred ----------------------------------------CCCccccccCCCCC-----ccccceeccCcceeeecCC--
Confidence 12567889999875 3689999999999999874
Q ss_pred CCcceEEeccccchhHHHHHHHHHHHHhC----CCCCHHHHHHHHHhhcccccCCCCCccCCCCCCCCCCCcccccccCc
Q 004205 538 GKMQFNILSGTSMACPHVTGIATLIKAVH----PSWSPSAIKSAIMTTATALDKNHKPITVDPKGRRGNAFDYGSGFLNP 613 (768)
Q Consensus 538 ~~~~y~~~sGTSmAaP~VAG~aALl~q~~----p~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~G~G~vn~ 613 (768)
+.|..++|||||||||||++|||+|++ |.++|+|||++|++||++++. ..+.....+|+|+||+
T Consensus 202 --~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~----------~~~~~~~~~G~G~ln~ 269 (282)
T 3zxy_A 202 --GGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDD----------DAPEQARRCLAGRLNV 269 (282)
T ss_dssp --SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-----------------CGGGTTCBCCH
T ss_pred --CceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCC----------CCCCccCceeeeEeCH
Confidence 569999999999999999999999874 789999999999999996532 2234566899999999
Q ss_pred cccCC
Q 004205 614 RKVLS 618 (768)
Q Consensus 614 ~~Al~ 618 (768)
.+|++
T Consensus 270 ~~A~~ 274 (282)
T 3zxy_A 270 SGAFT 274 (282)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
No 20
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=2e-50 Score=433.14 Aligned_cols=270 Identities=23% Similarity=0.283 Sum_probs=216.3
Q ss_pred CCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCcccccccccc
Q 004205 134 MEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGYEAEEDIVET 213 (768)
Q Consensus 134 ~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 213 (768)
+++|+....+ +||+|||||||||++||+|.+. .+.+..++..+.
T Consensus 11 ~~aW~~~~G~-~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~~--------- 54 (306)
T 4h6w_A 11 KKLWSETRGD-PKICVAVLDGIVDQNHPCFIGA--------------------------DLTRLPSLVSGE--------- 54 (306)
T ss_dssp HHHHHHCSCC-TTCEEEEESSCCCTTSGGGTTC--------------------------EEEECC---------------
T ss_pred HHHHhhhCCC-CCCEEEEEcCCCCCCChhHcCC--------------------------cccCCCcccCCC---------
Confidence 3799988766 9999999999999999999642 222322332221
Q ss_pred ccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC--CCHHHHHHHHHHHHHcCCcEE
Q 004205 214 VSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG--CYDVDLLAAFDDAIRDGVHIL 291 (768)
Q Consensus 214 ~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVI 291 (768)
.....|.+||||||||||+|+.. +.+.||||+|+|+.+|++.+.+ .....+++||+||++++++||
T Consensus 55 --~~~~~d~~gHGThVAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi 122 (306)
T 4h6w_A 55 --ANANGSMSTHGTHVASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANII 122 (306)
T ss_dssp ------CCCCHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred --CCCCCCCCCchHHHHHHHHcccc----------CCcceeccccccceeeccccccccchHHHHHHHHHHhhcccceee
Confidence 12234678999999999998752 2348999999999999996543 677889999999999999999
Q ss_pred EeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-CCCcccCCCceEEEcccCCCccceeeEEeCCCceEecc
Q 004205 292 SLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-EGSVTNLAPWMFTIAASSTDRDFTSEIVLGDGANFTGE 370 (768)
Q Consensus 292 N~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~ 370 (768)
|+|||... ........+..+++.+.++|++||+||||+|. ....|+..+++|+|||++.
T Consensus 123 ~~s~g~~~-~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~------------------- 182 (306)
T 4h6w_A 123 NVSAGQLT-DAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD------------------- 182 (306)
T ss_dssp EECCCEEE-SSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT-------------------
T ss_pred eccccccc-cCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC-------------------
Confidence 99999754 22234567888888999999999999999998 7778888899999997531
Q ss_pred cccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEEEEEcCC
Q 004205 371 SLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGMILVDEP 450 (768)
Q Consensus 371 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~ 450 (768)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCceeeCCceEE
Q 004205 451 GKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPDVTAPGLNII 530 (768)
Q Consensus 451 ~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~ 530 (768)
.+.++.||+||+. ..||||+|||++|+
T Consensus 183 ------------------------------------------------~~~~~~~s~~g~~-----~~~~di~APG~~i~ 209 (306)
T 4h6w_A 183 ------------------------------------------------QGKPVDFSNWGDA-----YQKQGILAPGKDIL 209 (306)
T ss_dssp ------------------------------------------------TSCBCSSSCBCHH-----HHHHEEEEECSSEE
T ss_pred ------------------------------------------------CCCccccccccCC-----cCcceeecCCcCcc
Confidence 2457789999964 36899999999999
Q ss_pred EEecCCCCCcceEEeccccchhHHHHHHHHHHHHh----CCCCCHHHHHHHHHhhcccccCCCCCccCCCCCCCCCCCcc
Q 004205 531 AAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAV----HPSWSPSAIKSAIMTTATALDKNHKPITVDPKGRRGNAFDY 606 (768)
Q Consensus 531 Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~p~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~ 606 (768)
++++. +.|..++|||||||||||++|||+++ +|.|+|+|||++|++||++++..+ ..+...|
T Consensus 210 s~~~~----~~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~----------~~~~~~~ 275 (306)
T 4h6w_A 210 GAKPN----GGTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD----------TDDQSRC 275 (306)
T ss_dssp EECTT----SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT----------CSCGGGG
T ss_pred cccCC----CceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC----------CCCCCCc
Confidence 99874 56999999999999999999999864 699999999999999999764322 2234579
Q ss_pred cccccCccccCC
Q 004205 607 GSGFLNPRKVLS 618 (768)
Q Consensus 607 G~G~vn~~~Al~ 618 (768)
|+|+||+.+|++
T Consensus 276 G~G~ln~~~Av~ 287 (306)
T 4h6w_A 276 LMGKLNILDAIE 287 (306)
T ss_dssp TTCBCCHHHHHH
T ss_pred ceeecCHHHHHH
Confidence 999999999997
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=3.2e-50 Score=438.87 Aligned_cols=279 Identities=20% Similarity=0.143 Sum_probs=223.1
Q ss_pred ccccccccCCCCcCCCCCCCCc--ceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEecc
Q 004205 124 DFMGLMGEESMEIPGFSTKNQV--NIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYM 201 (768)
Q Consensus 124 ~~~g~~~~~~~~~~~~~~~Gg~--GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~ 201 (768)
..|+++.+++.++|+. .+| + ||+||||||||| +||+|.+ ++...++|.
T Consensus 23 ~~W~l~~i~~~~aw~~-~~G-~~~gv~VaViDsGid-~Hp~l~~---------------------------~~~~~~~~~ 72 (347)
T 2iy9_A 23 KPWYFDAIGLTETTMS-LTD-KNTPVVVSVVDSGVA-FIGGLSD---------------------------SEFAKFSFT 72 (347)
T ss_dssp CCHHHHHHTCCHHHHH-TSC-TTSCCEEEEEESCCC-CCGGGTT---------------------------CEEEEEECB
T ss_pred cCcchhhCChHHHHHH-hcC-CCCCCEEEEEcCCCc-CChhhhc---------------------------CcccCCccc
Confidence 3467777788899998 789 9 999999999999 9999963 234445554
Q ss_pred CCccccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCCCCHHHHHHHHH
Q 004205 202 SGYEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFD 281 (768)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g~~~~~i~~ai~ 281 (768)
++.. +.+...+.|..||||||||||+|+ .| +.||||+|+|+.+|++++.+.. ++++||+
T Consensus 73 ~~~~-------~~~~~~~~d~~gHGT~vAgiia~~-------~g-----~~GvAp~a~l~~~~v~~~~~~~--~~~~ai~ 131 (347)
T 2iy9_A 73 QDGS-------PFPVKKSEALYIHGTAMASLIASR-------YG-----IYGVYPHALISSRRVIPDGVQD--SWIRAIE 131 (347)
T ss_dssp TTCC-------SSCCSSSHHHHHHHHHHHHHHHCS-------SS-----SCCSSTTCEEEEEECCSSBCTT--HHHHHHH
T ss_pred CCCC-------CCCCCCCCCCCCcHHHHHHHHhcc-------cC-----CcccCCCCEEEEEEEecCCCHH--HHHHHHH
Confidence 3311 111124557889999999999997 12 3899999999999999765543 9999999
Q ss_pred HHHHc------CCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC-C-------CCcccCCC------
Q 004205 282 DAIRD------GVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN-E-------GSVTNLAP------ 341 (768)
Q Consensus 282 ~a~~~------g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~-~-------~~~~~~~p------ 341 (768)
||+++ |++|||||||... .......+..+++.+.++|++||+||||+|. . ...|+..+
T Consensus 132 ~a~~~~~~~~~~~~Vin~S~G~~~--~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~ 209 (347)
T 2iy9_A 132 SIMSNVFLAPGEEKIINISGGQKG--VASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVN 209 (347)
T ss_dssp HHHTCTTSCTTEEEEEEESSCBCC--C-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHH
T ss_pred HHHhhhhcccCCceEEEeccccCC--CCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccc
Confidence 99999 9999999999774 1245678888999999999999999999997 2 34567777
Q ss_pred ----ceEEEcccCC--CccceeeEEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCe
Q 004205 342 ----WMFTIAASST--DRDFTSEIVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGK 415 (768)
Q Consensus 342 ----~vitVgAs~~--~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gk 415 (768)
++|+|||++. +...
T Consensus 210 ~~~~~vi~Vga~~~~~~g~~------------------------------------------------------------ 229 (347)
T 2iy9_A 210 KKQDPVIRVAALAQYRKGET------------------------------------------------------------ 229 (347)
T ss_dssp HHTCCEEEEEEECCCCTTSC------------------------------------------------------------
T ss_pred cccCCEEEEEEcccCCCCce------------------------------------------------------------
Confidence 8999998653 1100
Q ss_pred EEEEeecCCCchhHHHHHHHHHHcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecC
Q 004205 416 VLVCRHAESSTESKLRKSMVVKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLG 495 (768)
Q Consensus 416 ivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~ 495 (768)
T Consensus 230 -------------------------------------------------------------------------------- 229 (347)
T 2iy9_A 230 -------------------------------------------------------------------------------- 229 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccccCCCCCCCCCCcccCceeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHH
Q 004205 496 SEPAPRVAAFSSKGPNALNPEILKPDVTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIK 575 (768)
Q Consensus 496 ~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik 575 (768)
......++.||++||+ ||||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|+++|||
T Consensus 230 ~~~~~~~~~fS~~G~~-------~~di~APG~~i~s~~~~----~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~ 298 (347)
T 2iy9_A 230 PVLHGGGITGSRFGNN-------WVDIAAPGQNITFLRPD----AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELK 298 (347)
T ss_dssp CCBCCCSSSCBCBCTT-------TCSEEEECSSEEEECTT----SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHH
T ss_pred ecccCCCCCCCCCCCC-------CCEEEeCCCCeEeecCC----CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 0011345799999994 56999999999999873 569999999999999999999999999999999999
Q ss_pred HHHHhhcccccCCCCCccCCCCCCCCCCCcccccccCccccCCC
Q 004205 576 SAIMTTATALDKNHKPITVDPKGRRGNAFDYGSGFLNPRKVLSP 619 (768)
Q Consensus 576 ~~L~~TA~~~~~~g~p~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 619 (768)
++|++||+++... ....+|+|+||+.+|++.
T Consensus 299 ~~L~~tA~~~~~~-------------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 299 RTLLESADKYPSL-------------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp HHHHHHSEECGGG-------------TTTSGGGEECCHHHHHHH
T ss_pred HHHHHhCccCCCC-------------CCccccCCEecHHHHHHH
Confidence 9999999976432 135899999999999984
No 22
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=7.1e-50 Score=435.22 Aligned_cols=299 Identities=23% Similarity=0.333 Sum_probs=222.5
Q ss_pred cCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccc-cCCceeEEEEeccCCcccccc
Q 004205 131 EESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNAS-SCNRKVIGARYYMSGYEAEED 209 (768)
Q Consensus 131 ~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~-~~n~ki~g~~~~~~~~~~~~~ 209 (768)
+++..+|+.+++| +||+||||||||| +||+|.+.-.. .|+-........... ..........++ +.+..
T Consensus 19 i~~~~aw~~g~~G-~gV~VaViDtGi~-~hp~l~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~--- 88 (340)
T 3lpc_A 19 VKADKVWDMGFTG-QNVVVAVVDTGIL-HHRDLNANVLP----GYDFISNSQISLDGDGRDADPFDEGDWF-DNWAC--- 88 (340)
T ss_dssp CCHHHHHHHTCSC-TTCEEEEEESCBC-CCTTTGGGBCC----CEECCCCHHHHCSSSSSBSCCBCCCCCB-CTTTT---
T ss_pred CCHHHHHHhcCCC-CCeEEEEEcCCCC-CChhhhccccc----CccccCCccccccCCCccCCcccccccc-ccccc---
Confidence 5677999999999 9999999999998 99999743211 111000000000000 000000000000 00000
Q ss_pred ccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCCCCHHHHHHHHHHHHH----
Q 004205 210 IVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIR---- 285 (768)
Q Consensus 210 ~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g~~~~~i~~ai~~a~~---- 285 (768)
...+.+.....|..||||||||||+|...++. .+.||||+|+|+.+|+++..++..+++++||+||++
T Consensus 89 ~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~--------g~~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~ 160 (340)
T 3lpc_A 89 GGRPDPRKERSDSSWHGSHVAGTIAAVTNNRI--------GVAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIA 160 (340)
T ss_dssp SCTTCGGGSCBCCCCHHHHHHHHHHCCCSSSS--------SCCCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCT
T ss_pred cCCCCcccCCCCCCCCHHHHHHHHHccCCCCC--------cceeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhccccc
Confidence 00112223457889999999999999765432 248999999999999998877888999999999998
Q ss_pred ------cCCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC--CCCcccCCCceEEEcccCCCcccee
Q 004205 286 ------DGVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN--EGSVTNLAPWMFTIAASSTDRDFTS 357 (768)
Q Consensus 286 ------~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~--~~~~~~~~p~vitVgAs~~~~~~~~ 357 (768)
.+++|||||||... .....+..+++++.++|++||+||||+|. ....|+..+++|+|||++.
T Consensus 161 ~~~~~~~~~~Vin~S~G~~~----~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------ 230 (340)
T 3lpc_A 161 GIPENRNPAKVINMSLGSDG----QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTS------ 230 (340)
T ss_dssp TSCCCSSCCSEEEECCCEES----CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECT------
T ss_pred ccccccCCCeEEEeCcCCCC----CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCC------
Confidence 88999999999864 23456777888899999999999999998 4456888899999997531
Q ss_pred eEEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHH
Q 004205 358 EIVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVK 437 (768)
Q Consensus 358 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~ 437 (768)
T Consensus 231 -------------------------------------------------------------------------------- 230 (340)
T 3lpc_A 231 -------------------------------------------------------------------------------- 230 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCc
Q 004205 438 EAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEI 517 (768)
Q Consensus 438 ~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~ 517 (768)
.+.++.||++||.
T Consensus 231 -------------------------------------------------------------~~~~~~~S~~g~~------ 243 (340)
T 3lpc_A 231 -------------------------------------------------------------RGIRASFSNYGVD------ 243 (340)
T ss_dssp -------------------------------------------------------------TSSBCTTCCBSTT------
T ss_pred -------------------------------------------------------------CCCcCCCCCCCCC------
Confidence 2567899999985
Q ss_pred ccCceeeCCceEEEEecCCC---CCcceEEeccccchhHHHHHHHHHHHHh-C---CCCCHHHHHHHHHhhcccccCCCC
Q 004205 518 LKPDVTAPGLNIIAAWSPAV---GKMQFNILSGTSMACPHVTGIATLIKAV-H---PSWSPSAIKSAIMTTATALDKNHK 590 (768)
Q Consensus 518 ~KPDI~APG~~I~Sa~~~~~---~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---p~lsp~~ik~~L~~TA~~~~~~g~ 590 (768)
|||+|||++|+++++... ..+.|..++|||||||||||++|||+|+ + |.|++++||++|++||+++.
T Consensus 244 --~di~ApG~~i~s~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~---- 317 (340)
T 3lpc_A 244 --VDLAAPGQDILSTVDSGTRRPVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFN---- 317 (340)
T ss_dssp --CCEEEECSSEEEEEESCSSSCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCS----
T ss_pred --ceEEecCCCeecccCCCCcCCCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCC----
Confidence 499999999999987531 1345999999999999999999999998 5 99999999999999999642
Q ss_pred CccCCCCCCCCCCCcccccccCccccCCC
Q 004205 591 PITVDPKGRRGNAFDYGSGFLNPRKVLSP 619 (768)
Q Consensus 591 p~~~~~~~~~~~~~~~G~G~vn~~~Al~~ 619 (768)
..+...+|+|+||+.+|++.
T Consensus 318 ---------~~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 318 ---------GRLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp ---------SCCSSCCCSSBCCHHHHHHH
T ss_pred ---------CCCCCCcccceecHHHHHHH
Confidence 23456899999999999874
No 23
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1.3e-48 Score=469.18 Aligned_cols=352 Identities=22% Similarity=0.217 Sum_probs=247.4
Q ss_pred CCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC---CCHHHHHHHHHHHHH-----cCCcEE
Q 004205 220 RDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG---CYDVDLLAAFDDAIR-----DGVHIL 291 (768)
Q Consensus 220 ~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g---~~~~~i~~ai~~a~~-----~g~dVI 291 (768)
.|++||||||||||||.. ++ ..+.||||+|+|+.+|+++..+ .+..+++++|.+|++ .|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~--------~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SS--------RDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SS--------SSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CC--------CCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478999999999999986 22 2348999999999999997643 255778888888877 799999
Q ss_pred EeccCCCCCCCCCchhHHHHHHHHhh-cCCcEEEEeccCCCC-C--CCcccC--CCceEEEcccCCCccceeeEEeCCCc
Q 004205 292 SLSLGPEAPQGDYFSDAISIGSFHAT-SRGILVVASAGNEGN-E--GSVTNL--APWMFTIAASSTDRDFTSEIVLGDGA 365 (768)
Q Consensus 292 N~SlG~~~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~g~-~--~~~~~~--~p~vitVgAs~~~~~~~~~~~~~~~~ 365 (768)
|||||.... ....+.+..++.++. ++|++||+||||+|. . ...|+. ++++|+|||++...........
T Consensus 338 NmS~G~~~~--~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~---- 411 (1354)
T 3lxu_X 338 NMSYGEHAN--WSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM---- 411 (1354)
T ss_dssp EECCCCCCS--CSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC--------
T ss_pred EcCCccCCC--CCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc----
Confidence 999998752 123456777777776 899999999999998 3 335664 8999999997543210000000
Q ss_pred eEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEEE
Q 004205 366 NFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGMI 445 (768)
Q Consensus 366 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i 445 (768)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCceeeC
Q 004205 446 LVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPDVTAP 525 (768)
Q Consensus 446 ~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~AP 525 (768)
.....+.++.|||+||+. ++++||||+||
T Consensus 412 -------------------------------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaAP 440 (1354)
T 3lxu_X 412 -------------------------------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCAP 440 (1354)
T ss_dssp -------------------------------------------------------CCCCCCCCSCCS--SSSCCEEEEEE
T ss_pred -------------------------------------------------ccCCCCccccccCCCCCc--cCCCcceEEec
Confidence 011226789999999997 89999999999
Q ss_pred CceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHH----hCCCCCHHHHHHHHHhhcccccCCCCCccCCCCCCCC
Q 004205 526 GLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKA----VHPSWSPSAIKSAIMTTATALDKNHKPITVDPKGRRG 601 (768)
Q Consensus 526 G~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~~~~~ 601 (768)
|++|+++... ..+.|..++|||||||||||++|||++ ++|+|++.+||++|++||++++ ..
T Consensus 441 G~~I~St~~~--~~~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~-------------~~ 505 (1354)
T 3lxu_X 441 GGAIASVPQF--TMSKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLG-------------YV 505 (1354)
T ss_dssp C-----------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCT-------------TS
T ss_pred CceEEEeecC--CCCceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCC-------------CC
Confidence 9999998653 235699999999999999999999987 7999999999999999999652 13
Q ss_pred CCCcccccccCccccCCCCeeecCCCcchhhhhhccCCC-ccceeEeecCCCcCCCCCCCCCCCCCCeEEecCCCccEEE
Q 004205 602 NAFDYGSGFLNPRKVLSPGLIYDAQPIDYTVFLCSIGYD-EKSLHLVTRDNSKCSQKLPAPYDLNYPSITVPNLKGNFSV 680 (768)
Q Consensus 602 ~~~~~G~G~vn~~~Al~~~l~~~~~~~~y~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~t~ 680 (768)
+++.||+|+||+.+|++..+.|+..+++|+.|+|..+.. .+.|.+- .. ......++
T Consensus 506 ~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgIylR--~~---------------------~~~~~~~~ 562 (1354)
T 3lxu_X 506 DPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGIHLR--QG---------------------VQRNSIDY 562 (1354)
T ss_dssp CTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSEEEC--SS---------------------CCCSCEEE
T ss_pred CcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCceEEe--cc---------------------ccCCceEE
Confidence 456899999999999999999999999999999998853 3433221 11 01122333
Q ss_pred EEEEE----ecC---C-CceeE--EEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEecCCCCceEEEEEEEEcC---
Q 004205 681 TRSVT----NVG---K-PRSIY--KAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKLTSPPKGYGFGYLSWKNG--- 747 (768)
Q Consensus 681 ~~tv~----N~~---~-~~~ty--~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~i~~~~~--- 747 (768)
+++|+ |.. . ....| ++.+.... .+-..|..|.+ .++.++|.|.+++..+..+.+++.|...|-
T Consensus 563 tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~--~wv~~p~~l~l--~~~~r~~~v~vDp~~L~~G~h~~~v~~~D~~~~ 638 (1354)
T 3lxu_X 563 NVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ--PWVQCGAFLDL--SYGTRSIAVRVDPTGLQPGVHSAVIRAYDTDCV 638 (1354)
T ss_dssp EEEEEEEESSCSCSSSTTCSCCCCEEEEEESS--TTEEECSCEEC--TTSCEEEEEEECGGGCCSEEEEEEEEEEESSCT
T ss_pred EEEEeeeecCcccCChhhccceEEEEEEecCC--Cceecccceee--cCCCceEEEEECCCCCCCcceeEEEEEEEcCCc
Confidence 33332 211 1 11112 22222111 12333777777 577899999999988888999999998763
Q ss_pred --ceEEEEEEEEEE
Q 004205 748 --KLRVTSPLVVQV 759 (768)
Q Consensus 748 --~~~v~~P~~~~~ 759 (768)
+...|+|+.|..
T Consensus 639 ~~gp~f~ipvTv~~ 652 (1354)
T 3lxu_X 639 QKGSLFEIPVTVVQ 652 (1354)
T ss_dssp TSCCSEEEEEEEEE
T ss_pred ccCceEEeeEEEEe
Confidence 358999999984
No 24
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=3.9e-49 Score=442.90 Aligned_cols=283 Identities=25% Similarity=0.301 Sum_probs=224.3
Q ss_pred CCCcCC-CCCCCCcceEEEEEeCCCCC------CCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCcc
Q 004205 133 SMEIPG-FSTKNQVNIIVGFIDTGIWP------ESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGYE 205 (768)
Q Consensus 133 ~~~~~~-~~~~Gg~GV~VgVIDtGid~------~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~~ 205 (768)
++.+|+ .+++| +||+|||||||||+ .||+|.+ ++...+.|.++
T Consensus 10 ~~~~~~~~g~~G-~gv~VaViDtGvd~~~~~~~~hp~l~~---------------------------~i~~~~~~~~~-- 59 (434)
T 1wmd_A 10 ADVAQSSYGLYG-QGQIVAVADTGLDTGRNDSSMHEAFRG---------------------------KITALYALGRT-- 59 (434)
T ss_dssp HHHHHHHHCCSC-TTCEEEEEESCCTTSCSSTTSCTTTTT---------------------------CEEEEEETTTT--
T ss_pred chhhhhccCCCC-cccEEEEEecCcCCCCCCcccCcccCC---------------------------CEeeeccccCC--
Confidence 448897 78999 99999999999999 7999953 34444455332
Q ss_pred ccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCCC---CHHHHHHHHHH
Q 004205 206 AEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSGC---YDVDLLAAFDD 282 (768)
Q Consensus 206 ~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g~---~~~~i~~ai~~ 282 (768)
..+.|..||||||||||+|++. .+.||||+|+|+.+|+++..+. ..+++.++|++
T Consensus 60 -----------~~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~ 117 (434)
T 1wmd_A 60 -----------NNANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQ 117 (434)
T ss_dssp -----------TCCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHH
T ss_pred -----------CCCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCccccccHHHHHHHHH
Confidence 2466889999999999998641 1489999999999999987653 34679999999
Q ss_pred HHHcCCcEEEeccCCCCCCCCCchhHHHHHHHHh-hcCCcEEEEeccCCCC---CCCcccCCCceEEEcccCCCccceee
Q 004205 283 AIRDGVHILSLSLGPEAPQGDYFSDAISIGSFHA-TSRGILVVASAGNEGN---EGSVTNLAPWMFTIAASSTDRDFTSE 358 (768)
Q Consensus 283 a~~~g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~g~---~~~~~~~~p~vitVgAs~~~~~~~~~ 358 (768)
|+++|++|||||||.... . ..+....+++++ .++|++||+||||+|. ....|+.++++|+|||++..+...
T Consensus 118 a~~~g~~Vin~S~G~~~~-~--~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~-- 192 (434)
T 1wmd_A 118 AYSAGARIHTNSWGAAVN-G--AYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF-- 192 (434)
T ss_dssp HHHTTCSEEEECCCBCCT-T--CCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG--
T ss_pred HHhcCCeEEEecCCCCcC-C--cCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc--
Confidence 999999999999998741 1 123445556555 5899999999999997 345678899999999975432100
Q ss_pred EEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHH
Q 004205 359 IVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKE 438 (768)
Q Consensus 359 ~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~ 438 (768)
+
T Consensus 193 ------------------------------------------------------------------~------------- 193 (434)
T 1wmd_A 193 ------------------------------------------------------------------G------------- 193 (434)
T ss_dssp ------------------------------------------------------------------C-------------
T ss_pred ------------------------------------------------------------------C-------------
Confidence 0
Q ss_pred cCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcc
Q 004205 439 AGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEIL 518 (768)
Q Consensus 439 ~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~ 518 (768)
. .....+.++.|||+||+. ++++
T Consensus 194 --~-----------------------------------------------------~~~~~~~~a~fS~~G~~~--~g~~ 216 (434)
T 1wmd_A 194 --S-----------------------------------------------------YADNINHVAQFSSRGPTK--DGRI 216 (434)
T ss_dssp --G-----------------------------------------------------GGSCTTSBCTTSCCCCCT--TSCC
T ss_pred --c-----------------------------------------------------ccCCCCccccccCCCCCC--CCCC
Confidence 0 011236789999999998 8999
Q ss_pred cCceeeCCceEEEEecCCC--------CCcceEEeccccchhHHHHHHHHHHHHhCCCC-----CHHHHHHHHHhhcccc
Q 004205 519 KPDVTAPGLNIIAAWSPAV--------GKMQFNILSGTSMACPHVTGIATLIKAVHPSW-----SPSAIKSAIMTTATAL 585 (768)
Q Consensus 519 KPDI~APG~~I~Sa~~~~~--------~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~l-----sp~~ik~~L~~TA~~~ 585 (768)
||||+|||++|+++++... ....|..++|||||||||||++|||+|++|++ ++++||++|++||+++
T Consensus 217 kpdi~ApG~~i~s~~~~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~ 296 (434)
T 1wmd_A 217 KPDVMAPGTFILSARSSLAPDSSFWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADI 296 (434)
T ss_dssp CCCEEEECSSEEEECCTTCCGGGSSEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCC
T ss_pred CceEEcCCCCeEecCCCCCCCcccccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCccc
Confidence 9999999999999986321 13569999999999999999999999998865 8999999999999964
Q ss_pred cCCCCCccCCCCCCCCCCCcccccccCccccCCCC
Q 004205 586 DKNHKPITVDPKGRRGNAFDYGSGFLNPRKVLSPG 620 (768)
Q Consensus 586 ~~~g~p~~~~~~~~~~~~~~~G~G~vn~~~Al~~~ 620 (768)
. ...+.+.||||++|+.+|+...
T Consensus 297 ~------------~~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 297 G------------LGYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp S------------SCSSCTTTTTCBCCHHHHHTCE
T ss_pred C------------CCCCCccCCcCeEeHHHhcccc
Confidence 2 2346779999999999999754
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=2.2e-48 Score=411.19 Aligned_cols=234 Identities=24% Similarity=0.336 Sum_probs=201.5
Q ss_pred CCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCccccccccc
Q 004205 133 SMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGYEAEEDIVE 212 (768)
Q Consensus 133 ~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~ 212 (768)
...+|..+.+| +||+|||||||||++||+|.+ ++...++|.++.
T Consensus 18 ~~~aw~~~~~G-~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~~~-------- 61 (284)
T 1sh7_A 18 LDRNYNANFDG-FGVTAYVIDTGVNNNHEEFGG---------------------------RSVSGYDFVDND-------- 61 (284)
T ss_dssp CCSBCCCSCCC-TTCEEEEEESCCCTTCTTTTT---------------------------CEEEEEETTTTB--------
T ss_pred chhhhhcCCCC-CCCEEEEEcCCCCCCChhHcC---------------------------CccccccccCCC--------
Confidence 35689999999 999999999999999999963 233444554331
Q ss_pred cccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHHHHHHHc--CCc
Q 004205 213 TVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAFDDAIRD--GVH 289 (768)
Q Consensus 213 ~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai~~a~~~--g~d 289 (768)
..+.|..||||||||||+|+. .||||+|+|+.+|+++..+ +..+++++||+|++++ +++
T Consensus 62 ----~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~ 123 (284)
T 1sh7_A 62 ----ADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPS 123 (284)
T ss_dssp ----SCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSE
T ss_pred ----CCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCc
Confidence 245688999999999999864 6999999999999998766 6788999999999984 799
Q ss_pred EEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC--CCCcccCCCceEEEcccCCCccceeeEEeCCCceE
Q 004205 290 ILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN--EGSVTNLAPWMFTIAASSTDRDFTSEIVLGDGANF 367 (768)
Q Consensus 290 VIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~--~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~ 367 (768)
|||||||... ...+..+++++.++|++||+||||+|. ....|+..+++|+|||++.
T Consensus 124 Vin~S~G~~~------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------------- 181 (284)
T 1sh7_A 124 VANMSLGGGQ------STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS---------------- 181 (284)
T ss_dssp EEEECCCBSC------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT----------------
T ss_pred EEEeCCCCCC------CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC----------------
Confidence 9999999873 357788888999999999999999998 4567888999999997531
Q ss_pred ecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEEEEE
Q 004205 368 TGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGMILV 447 (768)
Q Consensus 368 ~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~ 447 (768)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCceeeCCc
Q 004205 448 DEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPDVTAPGL 527 (768)
Q Consensus 448 n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~ 527 (768)
.+.++.||++||.. ||+|||+
T Consensus 182 ---------------------------------------------------~~~~~~~S~~G~~~--------di~ApG~ 202 (284)
T 1sh7_A 182 ---------------------------------------------------SDSRSSFSNWGSCV--------DLFAPGS 202 (284)
T ss_dssp ---------------------------------------------------TSBBCTTCCBSTTC--------CEEEECS
T ss_pred ---------------------------------------------------CCCcCcccCCCCcc--------EEEeccC
Confidence 25678999999976 9999999
Q ss_pred eEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccc
Q 004205 528 NIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATAL 585 (768)
Q Consensus 528 ~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~ 585 (768)
+|+++++. +.|..++|||||||||||++|||+|++|+|+++|||++|++||++.
T Consensus 203 ~i~s~~~~----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 256 (284)
T 1sh7_A 203 QIKSAWYD----GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASEN 256 (284)
T ss_dssp SEEEECTT----SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred CeEEecCC----CCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccC
Confidence 99999874 4699999999999999999999999999999999999999999965
No 26
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=2.5e-48 Score=409.65 Aligned_cols=238 Identities=29% Similarity=0.357 Sum_probs=200.8
Q ss_pred ccccccccCCCC------cCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEE
Q 004205 124 DFMGLMGEESME------IPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGA 197 (768)
Q Consensus 124 ~~~g~~~~~~~~------~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~ 197 (768)
..|+++.++++. .|+. .+| +||+|+|||||||++||+|.+ ++...
T Consensus 6 ~~W~l~~i~~~~~~~~~~~~~~-~~G-~gv~VaViDsGvd~~H~~l~~---------------------------~~~~~ 56 (279)
T 2pwa_A 6 APWGLARISSTSPGTSTYYYDE-SAG-QGSCVYVIDTGIEASHPEFEG---------------------------RAQMV 56 (279)
T ss_dssp CCHHHHHHTCSSTTCCCEECCT-TTT-TTEEEEEEESCCCTTCGGGTT---------------------------CEEEE
T ss_pred CCcChhhcCCCCcccccccccC-CCC-CCCEEEEEeCCCCCCChhHhC---------------------------ccccc
Confidence 345666555544 4554 678 999999999999999999963 23333
Q ss_pred EeccCCccccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHH
Q 004205 198 RYYMSGYEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDL 276 (768)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i 276 (768)
++|.+ .+.|..||||||||||+|+. .||||+|+|+.+|++++.+ +..+++
T Consensus 57 ~~~~~---------------~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~ 107 (279)
T 2pwa_A 57 KTYYY---------------SSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTI 107 (279)
T ss_dssp EESSS---------------CSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHH
T ss_pred cCCCC---------------CCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHH
Confidence 44431 24578899999999999863 7999999999999998776 788999
Q ss_pred HHHHHHHHHcCC-------cEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC--CCCcccCCCceEEEc
Q 004205 277 LAAFDDAIRDGV-------HILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN--EGSVTNLAPWMFTIA 347 (768)
Q Consensus 277 ~~ai~~a~~~g~-------dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~--~~~~~~~~p~vitVg 347 (768)
++||+|++++++ +|||||||... .+.+..+++++.++|++||+||||+|. ....|+..+++|+||
T Consensus 108 ~~ai~~a~~~~~~~~~~~~~Vin~S~G~~~------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vg 181 (279)
T 2pwa_A 108 IAGMDFVASDKNNRNCPKGVVASLSLGGGY------SSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVG 181 (279)
T ss_dssp HHHHHHHHHHGGGSCCTTEEEEEECCCEEC------CHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEE
T ss_pred HHHHHHHHhcCccccCCCccEEEecCCCCC------CHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEE
Confidence 999999999887 99999999752 367888888999999999999999998 345688899999999
Q ss_pred ccCCCccceeeEEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCch
Q 004205 348 ASSTDRDFTSEIVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTE 427 (768)
Q Consensus 348 As~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~ 427 (768)
|++.
T Consensus 182 a~~~---------------------------------------------------------------------------- 185 (279)
T 2pwa_A 182 ASDR---------------------------------------------------------------------------- 185 (279)
T ss_dssp EECT----------------------------------------------------------------------------
T ss_pred EecC----------------------------------------------------------------------------
Confidence 7531
Q ss_pred hHHHHHHHHHHcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccC
Q 004205 428 SKLRKSMVVKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSS 507 (768)
Q Consensus 428 ~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs 507 (768)
.+.++.||+
T Consensus 186 -----------------------------------------------------------------------~~~~~~~S~ 194 (279)
T 2pwa_A 186 -----------------------------------------------------------------------YDRRSSFSN 194 (279)
T ss_dssp -----------------------------------------------------------------------TSBBCTTCC
T ss_pred -----------------------------------------------------------------------CCCcCCcCC
Confidence 256789999
Q ss_pred CCCCCCCCCcccCceeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccc
Q 004205 508 KGPNALNPEILKPDVTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATAL 585 (768)
Q Consensus 508 ~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~ 585 (768)
|||.. ||+|||++|+++++. +.|..++|||||||||||++|||+|+ |+++++|||++|++||++.
T Consensus 195 ~G~~~--------di~APG~~i~s~~~~----~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~ 259 (279)
T 2pwa_A 195 YGSVL--------DIFGPGTDILSTWIG----GSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKG 259 (279)
T ss_dssp BSTTC--------CEEEECSSEEEEETT----TEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEES
T ss_pred CCCcc--------eEEEecCCeEEeecC----CCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccc
Confidence 99976 999999999999884 46999999999999999999999999 9999999999999999964
No 27
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=9e-48 Score=405.89 Aligned_cols=236 Identities=27% Similarity=0.345 Sum_probs=201.1
Q ss_pred CCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCccccccccc
Q 004205 133 SMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGYEAEEDIVE 212 (768)
Q Consensus 133 ~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~ 212 (768)
...+|..+++| +||+|||||||||++||+|.+ ++...++|.++
T Consensus 20 ~~~~~~~~~~G-~gv~VaViDtGid~~Hpdl~~---------------------------~~~~~~d~~~~--------- 62 (278)
T 2b6n_A 20 LDNNYHTDYDG-SGVTAFVIDTGVLNTHNEFGG---------------------------RASSGYDFIDN--------- 62 (278)
T ss_dssp CCSEEECSCCC-TTCEEEEEESCCCTTCGGGTT---------------------------CEEEEEETTTT---------
T ss_pred cchhcccCCCC-CCCEEEEEeCCCCCCChhHhc---------------------------ccccCeecCCC---------
Confidence 44689999999 999999999999999999963 23334455432
Q ss_pred cccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHHHHHHH--cCCc
Q 004205 213 TVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAFDDAIR--DGVH 289 (768)
Q Consensus 213 ~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai~~a~~--~g~d 289 (768)
..++.|..||||||||||+|+. .||||+|+|+.+|++++.+ +..+++++||+|+++ .+++
T Consensus 63 ---~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~ 125 (278)
T 2b6n_A 63 ---DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPA 125 (278)
T ss_dssp ---BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSE
T ss_pred ---CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCe
Confidence 1245688999999999999863 7999999999999998766 778899999999998 5899
Q ss_pred EEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC--CCCcccCCCceEEEcccCCCccceeeEEeCCCceE
Q 004205 290 ILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN--EGSVTNLAPWMFTIAASSTDRDFTSEIVLGDGANF 367 (768)
Q Consensus 290 VIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~--~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~~~ 367 (768)
|||||||... ...+..+++++.++|++||+||||+|. ....|+..+++|+|||++.
T Consensus 126 Vin~S~G~~~------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---------------- 183 (278)
T 2b6n_A 126 VANMSLGGGA------SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS---------------- 183 (278)
T ss_dssp EEEECCCEEC------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----------------
T ss_pred EEEECCCCCc------CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC----------------
Confidence 9999999863 356778888899999999999999998 3456788899999997531
Q ss_pred ecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEEEEE
Q 004205 368 TGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGMILV 447 (768)
Q Consensus 368 ~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~ 447 (768)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCceeeCCc
Q 004205 448 DEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPDVTAPGL 527 (768)
Q Consensus 448 n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~ 527 (768)
.+.++.||++||.. ||+|||+
T Consensus 184 ---------------------------------------------------~~~~~~~S~~G~~~--------di~ApG~ 204 (278)
T 2b6n_A 184 ---------------------------------------------------NDSRSSFSNYGTCL--------DIYAPGS 204 (278)
T ss_dssp ---------------------------------------------------TSBBCTTCCBSTTC--------CEEEECS
T ss_pred ---------------------------------------------------CCCcCCcCCCCCCC--------eEEeCCC
Confidence 25678999999965 9999999
Q ss_pred eEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccc
Q 004205 528 NIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATAL 585 (768)
Q Consensus 528 ~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~ 585 (768)
+|++++.. ..+.|..++|||||||||||++|||+|++|+|+++|||++|++||++.
T Consensus 205 ~i~s~~~~--~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 205 SITSSWYT--SNSATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp SEEEECTT--STTCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred CeECcccC--CCCCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 99999874 335699999999999999999999999999999999999999999864
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=1.1e-47 Score=405.17 Aligned_cols=237 Identities=27% Similarity=0.349 Sum_probs=203.2
Q ss_pred cCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCccccccc
Q 004205 131 EESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGYEAEEDI 210 (768)
Q Consensus 131 ~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~ 210 (768)
++...+|..+.+| +||+|||||||||++||+|.+ ++...+++..
T Consensus 18 ~~~~~a~~~~~~G-~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~-------- 61 (276)
T 4dzt_A 18 LPLSNSYTYTATG-RGVNVYVIDTGIRTTHREFGG---------------------------RARVGYDALG-------- 61 (276)
T ss_dssp SSCCSCEECSCCC-TTCEEEEEESCCCTTCGGGTT---------------------------CEEEEEETTS--------
T ss_pred CCcccceecCCCC-CCcEEEEEccCCCCCChhHcc---------------------------CeeccccCCC--------
Confidence 3456789999999 999999999999999999963 2333344432
Q ss_pred cccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHHHHHHHc--C
Q 004205 211 VETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAFDDAIRD--G 287 (768)
Q Consensus 211 ~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai~~a~~~--g 287 (768)
....|.+||||||||||+|.. .||||+|+|+.+|++++.+ +..++++++++|+++. +
T Consensus 62 ------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~ 121 (276)
T 4dzt_A 62 ------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRR 121 (276)
T ss_dssp ------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCS
T ss_pred ------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCC
Confidence 235578899999999999864 7999999999999998766 7889999999999987 8
Q ss_pred CcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC--CCCcccCCCceEEEcccCCCccceeeEEeCCCc
Q 004205 288 VHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN--EGSVTNLAPWMFTIAASSTDRDFTSEIVLGDGA 365 (768)
Q Consensus 288 ~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~--~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~~ 365 (768)
++|||||||... ...+..+++++.++|+++|+||||+|. ....|+..+++|+|||++
T Consensus 122 ~~vin~S~g~~~------~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~--------------- 180 (276)
T 4dzt_A 122 PAVANMSLGGGV------STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATT--------------- 180 (276)
T ss_dssp SEEEEECCCEEC------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC---------------
T ss_pred CeEEEECCCCCC------CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEEC---------------
Confidence 999999999763 467888888999999999999999998 344578889999999743
Q ss_pred eEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEEE
Q 004205 366 NFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGMI 445 (768)
Q Consensus 366 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i 445 (768)
T Consensus 181 -------------------------------------------------------------------------------- 180 (276)
T 4dzt_A 181 -------------------------------------------------------------------------------- 180 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCceeeC
Q 004205 446 LVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPDVTAP 525 (768)
Q Consensus 446 ~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~AP 525 (768)
..+.++.||++||.. ||+||
T Consensus 181 ----------------------------------------------------~~~~~~~~S~~g~~~--------dv~Ap 200 (276)
T 4dzt_A 181 ----------------------------------------------------SSDARASFSNYGSCV--------DLFAP 200 (276)
T ss_dssp ----------------------------------------------------TTSBBCTTCCBSTTC--------CEEEE
T ss_pred ----------------------------------------------------CCCCcCCcCCCCCCc--------eEEeC
Confidence 125678999999987 99999
Q ss_pred CceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhccccc
Q 004205 526 GLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATALD 586 (768)
Q Consensus 526 G~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~ 586 (768)
|++|+++++. ....|..++|||||||+|||++|||+|++|+++++|||++|++||++..
T Consensus 201 G~~i~s~~~~--~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 201 GASIPSAWYT--SDTATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp CSSEEEECTT--SSSCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred CCCeEccccC--CCCceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 9999999874 3346999999999999999999999999999999999999999999753
No 29
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=5.2e-47 Score=424.77 Aligned_cols=287 Identities=20% Similarity=0.185 Sum_probs=206.8
Q ss_pred ccccccCCCC----cCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEecc
Q 004205 126 MGLMGEESME----IPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYM 201 (768)
Q Consensus 126 ~g~~~~~~~~----~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~ 201 (768)
|+|+++.... .|..+.+| +||+|+|||||||++||+|.+. .......+.
T Consensus 4 WgL~rI~~~~~~~~aw~~~~tG-~GV~VaVIDTGId~~HpdL~gr--------------------------~~~~~~~~v 56 (546)
T 2qtw_B 4 WNLERITPPRYRADEYQPPDGG-SLVEVYLLDTSIQSDHREIEGR--------------------------VMVTDFENV 56 (546)
T ss_dssp HHHHHTSCSSCC--------CC-TTSEEEEEESCCCTTSTTTTTT--------------------------EEEEEEECC
T ss_pred CChhhcCCCcccchhcccCCCC-CCcEEEEECCCCCCCChHHccc--------------------------ccccCcccc
Confidence 4555554433 78888889 9999999999999999999742 111111111
Q ss_pred CCccccccccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHH
Q 004205 202 SGYEAEEDIVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAF 280 (768)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai 280 (768)
.+.+.. . ....+.|.+||||||||||+|+. .||||+|+|+.+|+++..+ ++.+++++||
T Consensus 57 ~~~dg~-----~-f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai 116 (546)
T 2qtw_B 57 PEEDGT-----R-FHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGL 116 (546)
T ss_dssp CCCC-------------CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHH
T ss_pred cCCCCc-----c-ccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHH
Confidence 110000 0 00235688999999999999864 6999999999999998766 6788999999
Q ss_pred HHHHHc------CCcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC--CCCcccCCCceEEEcccCCC
Q 004205 281 DDAIRD------GVHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN--EGSVTNLAPWMFTIAASSTD 352 (768)
Q Consensus 281 ~~a~~~------g~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~--~~~~~~~~p~vitVgAs~~~ 352 (768)
+|+++. +++|||||||... ...+..+++++.++|++||+||||+|. ....|+..+++|+|||++.+
T Consensus 117 ~~a~~~~~~~~~g~~VINmSlGg~~------s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~ 190 (546)
T 2qtw_B 117 EFIRKSQLVQPVGPLVVLLPLAGGY------SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQ 190 (546)
T ss_dssp HHHHHHHHHSCCSCEEEEECEEEEC------CHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTT
T ss_pred HHHHHhhhhccCCCeEEEecCCCCC------cHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCC
Confidence 999984 8999999999752 357788888999999999999999998 45568889999999986432
Q ss_pred ccceeeEEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHH
Q 004205 353 RDFTSEIVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRK 432 (768)
Q Consensus 353 ~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k 432 (768)
..
T Consensus 191 g~------------------------------------------------------------------------------ 192 (546)
T 2qtw_B 191 DQ------------------------------------------------------------------------------ 192 (546)
T ss_dssp SC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 10
Q ss_pred HHHHHHcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCC
Q 004205 433 SMVVKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNA 512 (768)
Q Consensus 433 ~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~ 512 (768)
....-..||+||+.+
T Consensus 193 -----------------------------------------------------------------~a~~s~~fSn~G~~v 207 (546)
T 2qtw_B 193 -----------------------------------------------------------------PVTLGTLGTNFGRCV 207 (546)
T ss_dssp -----------------------------------------------------------------BCEETTEECCBSTTC
T ss_pred -----------------------------------------------------------------cccccCCcCCCCCcc
Confidence 000001289999854
Q ss_pred CCCCcccCceeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccccCCCCCc
Q 004205 513 LNPEILKPDVTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATALDKNHKPI 592 (768)
Q Consensus 513 ~~~~~~KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~p~ 592 (768)
||+|||++|+++++. +...|..++|||||||||||++|||+|++|+|+|+|||++|++||.+.......+
T Consensus 208 --------DI~APG~~I~St~~~--~~~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~ 277 (546)
T 2qtw_B 208 --------DLFAPGEDIIGASSD--CSTCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWF 277 (546)
T ss_dssp --------CEEEECSSEEEECTT--STTCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGS
T ss_pred --------eEEecCccEEeeccC--CCCcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccC
Confidence 999999999999884 3356999999999999999999999999999999999999999998643211000
Q ss_pred c-----CCCC---CCCCCCCcccccc--cCccccCC
Q 004205 593 T-----VDPK---GRRGNAFDYGSGF--LNPRKVLS 618 (768)
Q Consensus 593 ~-----~~~~---~~~~~~~~~G~G~--vn~~~Al~ 618 (768)
. ..++ ........+|+|+ .++..+..
T Consensus 278 p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 278 PEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp CHHHHTTSCCEECCCCCTTCC--CCCEEEEEECCCC
T ss_pred ccccCCCCccchhccCCcccccCCCcchhchhccCC
Confidence 0 0001 1122456678888 77777765
No 30
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.1e-46 Score=439.00 Aligned_cols=294 Identities=19% Similarity=0.224 Sum_probs=204.8
Q ss_pred cCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCccccccc
Q 004205 131 EESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGYEAEEDI 210 (768)
Q Consensus 131 ~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~ 210 (768)
+++..+|..+++| +||+|||||||||++||+|.+.- ..+.++|..+..
T Consensus 57 in~~~aw~~g~~G-~gV~VaViDtGid~~Hpdl~~~~--------------------------~~~~~~~~~~~~----- 104 (600)
T 2oxa_A 57 LNLWWAHRTGVLG-HGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGSD----- 104 (600)
T ss_dssp CCCHHHHHTTCSC-TTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTCSS-----
T ss_pred cChHHHHhcCCCC-CCcEEEEecCCcCCCCcchhhcc--------------------------ccCceeccCCCC-----
Confidence 4567899999999 99999999999999999996321 112233333211
Q ss_pred cccccCCCCCC-CCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCCCCH--HHHHHHHHHHHHcC
Q 004205 211 VETVSFRSPRD-SSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSGCYD--VDLLAAFDDAIRDG 287 (768)
Q Consensus 211 ~~~~~~~~~~D-~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g~~~--~~i~~ai~~a~~~g 287 (768)
+..+.| .+||||||||||||. .++. .+.||||+|+|+.+|+++..+... ..+++....+..++
T Consensus 105 -----d~~p~d~~~gHGT~vAGiiaa~-~n~~--------g~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~ 170 (600)
T 2oxa_A 105 -----DPTPTDPDTGHGTSVSGIIAAV-DNAI--------GTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRD 170 (600)
T ss_dssp -----CCCCCSTTCCHHHHHHHHHHCC-SSSS--------SCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHT
T ss_pred -----CCCCCCCCCCCccHHHHHhhcc-cCCC--------cceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccC
Confidence 123444 789999999999998 3321 248999999999999998766432 34444444577889
Q ss_pred CcEEEeccCCCCCCC---CCchhHHHHHH-HH--hhcCCcEEEEeccCCCC-CC----------------------Cccc
Q 004205 288 VHILSLSLGPEAPQG---DYFSDAISIGS-FH--ATSRGILVVASAGNEGN-EG----------------------SVTN 338 (768)
Q Consensus 288 ~dVIN~SlG~~~~~~---~~~~~~~~~a~-~~--a~~~Gi~vV~AAGN~g~-~~----------------------~~~~ 338 (768)
++|||||||...... ......+..++ .. +.++|++||+||||+|. .. ..++
T Consensus 171 ~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~ 250 (600)
T 2oxa_A 171 NRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSN 250 (600)
T ss_dssp CSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGG
T ss_pred CeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcc
Confidence 999999999874111 11112333333 22 55889999999999986 11 0111
Q ss_pred CCCceEEEcccCCCccceeeEEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEE
Q 004205 339 LAPWMFTIAASSTDRDFTSEIVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLV 418 (768)
Q Consensus 339 ~~p~vitVgAs~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl 418 (768)
.++|+|+|||+
T Consensus 251 ~s~~vItVgA~--------------------------------------------------------------------- 261 (600)
T 2oxa_A 251 SNFWNLVVSAL--------------------------------------------------------------------- 261 (600)
T ss_dssp GSSSEEEEEEE---------------------------------------------------------------------
T ss_pred cCceeEEEecc---------------------------------------------------------------------
Confidence 22334444432
Q ss_pred EeecCCCchhHHHHHHHHHHcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCC
Q 004205 419 CRHAESSTESKLRKSMVVKEAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEP 498 (768)
Q Consensus 419 ~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~ 498 (768)
..
T Consensus 262 ------------------------------------------------------------------------------~~ 263 (600)
T 2oxa_A 262 ------------------------------------------------------------------------------NA 263 (600)
T ss_dssp ------------------------------------------------------------------------------CT
T ss_pred ------------------------------------------------------------------------------cC
Confidence 23
Q ss_pred CCccccccCCCCCCCCCCcccCceeeCCceE-------EEEecCC-----------------------CCCcceEEeccc
Q 004205 499 APRVAAFSSKGPNALNPEILKPDVTAPGLNI-------IAAWSPA-----------------------VGKMQFNILSGT 548 (768)
Q Consensus 499 ~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I-------~Sa~~~~-----------------------~~~~~y~~~sGT 548 (768)
.+.++.||++||+. ||+|||++| +++.... ...+.|..++||
T Consensus 264 ~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGT 335 (600)
T 2oxa_A 264 DGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGT 335 (600)
T ss_dssp TSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSH
T ss_pred CCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccc
Confidence 46789999999988 999999984 4443210 011348999999
Q ss_pred cchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccccCCCCCcc-------------------CCCCCCCCCCCccccc
Q 004205 549 SMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATALDKNHKPIT-------------------VDPKGRRGNAFDYGSG 609 (768)
Q Consensus 549 SmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~p~~-------------------~~~~~~~~~~~~~G~G 609 (768)
|||||||||++|||+|++|+|+|++||++|++||++++..+.+.. .........++.||||
T Consensus 336 S~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G 415 (600)
T 2oxa_A 336 SSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFG 415 (600)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTC
T ss_pred hHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCc
Confidence 999999999999999999999999999999999998765442211 0001222345789999
Q ss_pred ccCccccCCCCeeecC
Q 004205 610 FLNPRKVLSPGLIYDA 625 (768)
Q Consensus 610 ~vn~~~Al~~~l~~~~ 625 (768)
+||+.+|++.+..|..
T Consensus 416 ~vda~~Av~~A~~~~~ 431 (600)
T 2oxa_A 416 LIDVNKALELAANHQP 431 (600)
T ss_dssp BCCHHHHHHHHTTCCC
T ss_pred hhhHHHHHHHHHhccc
Confidence 9999999986544443
No 31
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=7.5e-47 Score=427.91 Aligned_cols=296 Identities=17% Similarity=0.138 Sum_probs=218.7
Q ss_pred cCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCccccccc
Q 004205 131 EESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGYEAEEDI 210 (768)
Q Consensus 131 ~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~ 210 (768)
+++..+|+.+++| +||+|||||||||++||+|.+.-. . ...++|.++..
T Consensus 25 i~~~~aw~~g~~G-~gv~VaViDtGvd~~Hpdl~~~~~------------~-------------~~~~d~~~~~~----- 73 (471)
T 1p8j_A 25 LNVKEAWAQGFTG-HGIVVSILDDGIEKNHPDLAGNYD------------P-------------GASFDVNDQDP----- 73 (471)
T ss_dssp CCCHHHHHTTCSC-TTCEEEEEEBCCCTTCTTTGGGBC------------G-------------GGCEETTTTBS-----
T ss_pred CChHHHHhcCCCC-CCCEEEEEeCCcCCCChhHhhccC------------c-------------cCcccccCCCC-----
Confidence 6778999999999 999999999999999999974210 0 01123332211
Q ss_pred cccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCCCCHHHHHHHHHHHHH-cCCc
Q 004205 211 VETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIR-DGVH 289 (768)
Q Consensus 211 ~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g~~~~~i~~ai~~a~~-~g~d 289 (768)
.+.+...+.|.+||||||||||||...++. .+.||||+|+|+.+|+++ +..+++++|++++++ ++++
T Consensus 74 -~p~~~~~~~d~~gHGT~vAGiiaa~~~n~~--------g~~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~ 141 (471)
T 1p8j_A 74 -DPQPRYTQMNDNRHGTRCAGEVAAVANNGV--------CGVGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIH 141 (471)
T ss_dssp -CCCCCCCTTCTTCHHHHHHHHHHCCSSSSS--------SCCCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCC
T ss_pred -CCCCccCCCCCCCcHHHHHHHHHeeccCCC--------CCEEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCe
Confidence 011112456889999999999999764332 238999999999999985 446789999999999 9999
Q ss_pred EEEeccCCCCCCC--CCchhHHHHHHHHhh-----cCCcEEEEeccCCCC-CC----CcccCCCceEEEcccCCCcccee
Q 004205 290 ILSLSLGPEAPQG--DYFSDAISIGSFHAT-----SRGILVVASAGNEGN-EG----SVTNLAPWMFTIAASSTDRDFTS 357 (768)
Q Consensus 290 VIN~SlG~~~~~~--~~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~-~~----~~~~~~p~vitVgAs~~~~~~~~ 357 (768)
|||||||....+. ......+..++.++. .+|++||+||||+|. .. ..+..++++|+|||++.
T Consensus 142 Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~------ 215 (471)
T 1p8j_A 142 IYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ------ 215 (471)
T ss_dssp EEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT------
T ss_pred EEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC------
Confidence 9999999864211 011233444555554 479999999999997 22 12334578999997531
Q ss_pred eEEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHH
Q 004205 358 EIVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVK 437 (768)
Q Consensus 358 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~ 437 (768)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCc
Q 004205 438 EAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEI 517 (768)
Q Consensus 438 ~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~ 517 (768)
.+.++.||++||.. ...
T Consensus 216 -------------------------------------------------------------~g~~a~~S~~g~~~--~~~ 232 (471)
T 1p8j_A 216 -------------------------------------------------------------FGNVPWYSEACSST--LAT 232 (471)
T ss_dssp -------------------------------------------------------------TSCCCTTCCBCTTC--CEE
T ss_pred -------------------------------------------------------------CCCcccccCCCCcc--eEE
Confidence 25678999999987 455
Q ss_pred ccCceeeCCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccccCCCCCccCCCC
Q 004205 518 LKPDVTAPGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATALDKNHKPITVDPK 597 (768)
Q Consensus 518 ~KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~p~~~~~~ 597 (768)
.+|...+||..|+++... +..|..++|||||||||||++|||+|++|+|++++||++|++||++++......... .
T Consensus 233 ~~~~~~~~g~~i~st~~~---~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n-~ 308 (471)
T 1p8j_A 233 TYSSGNQNEKQIVTTDLR---QKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATN-G 308 (471)
T ss_dssp EECCCSTTSCCEEEEETT---TEEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEEC-T
T ss_pred eCCCCCCCCCCEEEeeCC---CCccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceec-C
Confidence 666777778899999863 246999999999999999999999999999999999999999999875432222111 1
Q ss_pred CCCCCCCcccccccCccccCCCCee
Q 004205 598 GRRGNAFDYGSGFLNPRKVLSPGLI 622 (768)
Q Consensus 598 ~~~~~~~~~G~G~vn~~~Al~~~l~ 622 (768)
........||+|+||+.+|++....
T Consensus 309 ~g~~~~~~~G~G~vda~~Av~~a~~ 333 (471)
T 1p8j_A 309 VGRKVSHSYGYGLLDAGAMVALAQN 333 (471)
T ss_dssp TSCEEBTTTBTCBCCHHHHHHHHHT
T ss_pred CCcccCCCCCCEEEcHhHHHHHhhc
Confidence 1123457899999999999985443
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=2.2e-46 Score=396.05 Aligned_cols=227 Identities=30% Similarity=0.397 Sum_probs=194.5
Q ss_pred CcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCccccccccccc
Q 004205 135 EIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGYEAEEDIVETV 214 (768)
Q Consensus 135 ~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 214 (768)
.+|+.. +| +||+|||||||||++||+|.+ ++...+.|.++
T Consensus 24 ~~~~~~-~G-~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~~----------- 63 (279)
T 3f7m_A 24 YAYDTS-AG-AGACVYVIDTGVEDTHPDFEG---------------------------RAKQIKSYAST----------- 63 (279)
T ss_dssp EEECTT-TT-TTEEEEEEESCCCTTCGGGTT---------------------------CEEEEEECSSS-----------
T ss_pred eeecCC-CC-CCCEEEEEcCCCCCCChhhcc---------------------------ccccccCCCCC-----------
Confidence 456555 79 999999999999999999963 23444444332
Q ss_pred cCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHHHHHHHcC------
Q 004205 215 SFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAFDDAIRDG------ 287 (768)
Q Consensus 215 ~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai~~a~~~g------ 287 (768)
..|.+||||||||||+|+. .||||+|+|+.+|+++..+ +..+++++||+|+++++
T Consensus 64 ----~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~ 125 (279)
T 3f7m_A 64 ----ARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCP 125 (279)
T ss_dssp ----SSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCT
T ss_pred ----CCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCC
Confidence 2278899999999999864 7999999999999998766 78899999999999986
Q ss_pred -CcEEEeccCCCCCCCCCchhHHHHHHHHhhcCCcEEEEeccCCCC--CCCcccCCCceEEEcccCCCccceeeEEeCCC
Q 004205 288 -VHILSLSLGPEAPQGDYFSDAISIGSFHATSRGILVVASAGNEGN--EGSVTNLAPWMFTIAASSTDRDFTSEIVLGDG 364 (768)
Q Consensus 288 -~dVIN~SlG~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~--~~~~~~~~p~vitVgAs~~~~~~~~~~~~~~~ 364 (768)
++|||||||.. ....+..+++++.++|++||+||||+|. ....|+..+++|+|||++
T Consensus 126 ~~~Vin~S~g~~------~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~-------------- 185 (279)
T 3f7m_A 126 RRTVASMSLGGG------YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATD-------------- 185 (279)
T ss_dssp TEEEEEECCCEE------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC--------------
T ss_pred CCeEEEeCCCcC------ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecC--------------
Confidence 89999999965 3467888888999999999999999998 444588889999999743
Q ss_pred ceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEE
Q 004205 365 ANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGM 444 (768)
Q Consensus 365 ~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~ 444 (768)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 3f7m_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCceee
Q 004205 445 ILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPDVTA 524 (768)
Q Consensus 445 i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~A 524 (768)
..+.++.||++||.. ||+|
T Consensus 186 -----------------------------------------------------~~~~~~~~S~~g~~~--------di~A 204 (279)
T 3f7m_A 186 -----------------------------------------------------SNDVRSTFSNYGRVV--------DIFA 204 (279)
T ss_dssp -----------------------------------------------------TTSBBCTTCCBSTTC--------CEEE
T ss_pred -----------------------------------------------------CCCCCCCCCCCCCCC--------eEEE
Confidence 125678999999976 9999
Q ss_pred CCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccc
Q 004205 525 PGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATAL 585 (768)
Q Consensus 525 PG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~ 585 (768)
||++|+++++. +.|..++|||||||+|||++|||+|++|+ ++++||++|++||++.
T Consensus 205 pG~~i~s~~~~----~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~ 260 (279)
T 3f7m_A 205 PGTSITSTWIG----GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKN 260 (279)
T ss_dssp ECSSEEEECGG----GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEES
T ss_pred CCCCeEeecCC----CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhcccc
Confidence 99999999874 55999999999999999999999999999 9999999999999974
No 33
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=3e-46 Score=425.75 Aligned_cols=288 Identities=18% Similarity=0.168 Sum_probs=216.4
Q ss_pred ccCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCcccccc
Q 004205 130 GEESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGYEAEED 209 (768)
Q Consensus 130 ~~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~ 209 (768)
.+++..+|+.+++| +||+|||||||||++||+|.+.-. ..+.++|.++..
T Consensus 40 ~i~~~~aw~~g~tG-~gv~VaViDtGvd~~Hpdl~~~~~-------------------------~~~~~d~~~~~~---- 89 (503)
T 2id4_A 40 DINVLDLWYNNITG-AGVVAAIVDDGLDYENEDLKDNFC-------------------------AEGSWDFNDNTN---- 89 (503)
T ss_dssp SCCCHHHHHTTCSC-TTCEEEEEESCCCTTSTTTTTTBC-------------------------GGGCEETTTTBS----
T ss_pred ccChHHHHhcCCCC-CCeEEEEEeCCCCCCChhHhhccc-------------------------ccCcccCCCCCC----
Confidence 35677899999999 999999999999999999974310 001233433211
Q ss_pred ccccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCCCCHHHHHHHHHHHHHcCCc
Q 004205 210 IVETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVH 289 (768)
Q Consensus 210 ~~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g~~~~~i~~ai~~a~~~g~d 289 (768)
+.....|.+||||||||||||...++. .+.||||+|+|+.+|+++.. ++..++++||+||++++ +
T Consensus 90 -----~~~p~~d~~gHGT~vAGiiaa~~~n~~--------~~~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~ 154 (503)
T 2id4_A 90 -----LPKPRLSDDYHGTRCAGEIAAKKGNNF--------CGVGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-D 154 (503)
T ss_dssp -----CCCCCSTTTTHHHHHHHHHHCCSSSSS--------SCCCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-S
T ss_pred -----CCCCCCCCCChHHHHHHHHHhccCCCC--------CcEEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-C
Confidence 011235788999999999999764332 23899999999999999743 67888999999999998 9
Q ss_pred EEEeccCCCCCCC--CCchhHHHHHHHHhh-----cCCcEEEEeccCCCC-CC--Ccc--cCCCceEEEcccCCCcccee
Q 004205 290 ILSLSLGPEAPQG--DYFSDAISIGSFHAT-----SRGILVVASAGNEGN-EG--SVT--NLAPWMFTIAASSTDRDFTS 357 (768)
Q Consensus 290 VIN~SlG~~~~~~--~~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~-~~--~~~--~~~p~vitVgAs~~~~~~~~ 357 (768)
|||||||....+. ......+..++.++. .+|++||+||||+|. .. ..+ ..++++|+|||++.
T Consensus 155 Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~------ 228 (503)
T 2id4_A 155 IYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH------ 228 (503)
T ss_dssp EEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT------
T ss_pred EEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCC------
Confidence 9999999864211 112345666666665 479999999999997 22 222 25677899987431
Q ss_pred eEEeCCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHH
Q 004205 358 EIVLGDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVK 437 (768)
Q Consensus 358 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~ 437 (768)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HcCceEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCc
Q 004205 438 EAGGVGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEI 517 (768)
Q Consensus 438 ~~Ga~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~ 517 (768)
.+.++.||++||..
T Consensus 229 -------------------------------------------------------------~~~~a~~S~~g~~~----- 242 (503)
T 2id4_A 229 -------------------------------------------------------------KDLHPPYSEGCSAV----- 242 (503)
T ss_dssp -------------------------------------------------------------TSCCCTTCCCCTTE-----
T ss_pred -------------------------------------------------------------CCCcCCcCCCCCcc-----
Confidence 25678999999987
Q ss_pred ccCceee----CCceEEEEecCCCCCcceEEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhcccccCC-CCCc
Q 004205 518 LKPDVTA----PGLNIIAAWSPAVGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATALDKN-HKPI 592 (768)
Q Consensus 518 ~KPDI~A----PG~~I~Sa~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~-g~p~ 592 (768)
|++| ||..|+++..+ +..|..++|||||||||||++|||+|++|+|++++||++|++||++++.. ....
T Consensus 243 ---~~~a~~~gpG~~I~st~~~---~~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~ 316 (503)
T 2id4_A 243 ---MAVTYSSGSGEYIHSSDIN---GRCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDW 316 (503)
T ss_dssp ---EEEEECSBTTBCEEEECST---TCEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCC
T ss_pred ---eEeecCCCCCCceEeecCC---CCceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCc
Confidence 8887 89999999543 25699999999999999999999999999999999999999999976533 1111
Q ss_pred cCCCCCCCCCCCcccccccCccccCCCCe
Q 004205 593 TVDPKGRRGNAFDYGSGFLNPRKVLSPGL 621 (768)
Q Consensus 593 ~~~~~~~~~~~~~~G~G~vn~~~Al~~~l 621 (768)
... .........||+|+||+++|++...
T Consensus 317 ~~~-~~g~~~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 317 RDS-AMGKKYSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp EEC-SSSSEEBTTTBTCBCCHHHHHHHHT
T ss_pred eec-CCCCccCcccCCcEecHHHHHHHHh
Confidence 111 1122345689999999999998543
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=1.6e-44 Score=422.25 Aligned_cols=315 Identities=18% Similarity=0.208 Sum_probs=203.4
Q ss_pred cCCCCcCCCCCCCCcceEEEEEeCCCCCCCCCCCCCCCCCCCCccccccccCCCCccccCCceeEEEEeccCCccccccc
Q 004205 131 EESMEIPGFSTKNQVNIIVGFIDTGIWPESPSFSDIGMPPAPAKWKGQCESGEAFNASSCNRKVIGARYYMSGYEAEEDI 210 (768)
Q Consensus 131 ~~~~~~~~~~~~Gg~GV~VgVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~f~~~~~n~ki~g~~~~~~~~~~~~~~ 210 (768)
+++..+|.++++| +||+|||||||||++||||.+.- ..+.+++.++..
T Consensus 57 inv~~aw~~g~tG-~GV~VaViDtGid~~HpDL~~n~--------------------------~~~~~~~~~~~~----- 104 (600)
T 3hjr_A 57 LNLWWAHRTGVLG-QGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGSD----- 104 (600)
T ss_dssp CCCHHHHHHTCSC-TTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTSSS-----
T ss_pred cCHHHHHHcCCCC-CCeEEEEEcCCCCCCChhHhhcc--------------------------ccCcceeecCCC-----
Confidence 5677899999999 99999999999999999996421 112223332211
Q ss_pred cccccCCCCCCCCCCcchhhhcccccccccccccccCCCcceeccCCCcEeeeeeecCCC-CCHHHHHHHH-HHHHHcCC
Q 004205 211 VETVSFRSPRDSSGHGSHTASTAAGRYVANMNYRGLAAGGARGGAPMARIAVYKTCWDSG-CYDVDLLAAF-DDAIRDGV 288 (768)
Q Consensus 211 ~~~~~~~~~~D~~gHGTHVAGi~ag~~~~~~~~~G~~~g~~~GVAP~A~L~~~kv~~~~g-~~~~~i~~ai-~~a~~~g~ 288 (768)
+.....|.+||||||||||||.. ++ .| +.||||+|+|+.+|++++.+ +..++++.|+ +++..+++
T Consensus 105 ----dp~p~~~~~gHGThVAGiIAa~~-n~---~g-----~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~ 171 (600)
T 3hjr_A 105 ----DPTPTDPDTAHGTSVSGIIAAVD-NA---IG-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDN 171 (600)
T ss_dssp ----CCCCCSTTCCHHHHHHHHHHCCS-SS---SS-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTC
T ss_pred ----CCCCCCCCCChHHHHHHHHhEeC-CC---CC-----cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCC
Confidence 11223457899999999999853 11 22 38999999999999998765 6677777776 67888999
Q ss_pred cEEEeccCCCCCCCCCc----hhHHHHHHHHh--hcCCcEEEEeccCCCC-CCCcccCCCceEEEcccCCCccceeeEEe
Q 004205 289 HILSLSLGPEAPQGDYF----SDAISIGSFHA--TSRGILVVASAGNEGN-EGSVTNLAPWMFTIAASSTDRDFTSEIVL 361 (768)
Q Consensus 289 dVIN~SlG~~~~~~~~~----~~~~~~a~~~a--~~~Gi~vV~AAGN~g~-~~~~~~~~p~vitVgAs~~~~~~~~~~~~ 361 (768)
+|||||||......... ...+..++..+ ..+|+++|+||||.+. .... . +.+.+..
T Consensus 172 ~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~-----~-~~~~~~g----------- 234 (600)
T 3hjr_A 172 RVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAG-----G-YVLNRTG----------- 234 (600)
T ss_dssp SEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEET-----T-EEEEEES-----------
T ss_pred CEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCcccccccc-----c-cccccCC-----------
Confidence 99999999764211111 12233333222 3689999999999774 1000 0 0000000
Q ss_pred CCCceEecccccccccccchhccccccccccccCcccCCccCcCCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCc
Q 004205 362 GDGANFTGESLSLCKMNASARIISASEAYAGYFTPYQSSYCLESSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGG 441 (768)
Q Consensus 362 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga 441 (768)
++ .......|.-.. +......|.+-
T Consensus 235 -~~------------------------------~~~~~~~~~~d~--~~~~~~~IsVg---------------------- 259 (600)
T 3hjr_A 235 -NG------------------------------PKLPFENSNLDP--SNSNFWNLVVS---------------------- 259 (600)
T ss_dssp -SC------------------------------CCCCSSBTTSSG--GGGSSSEEEEE----------------------
T ss_pred -CC------------------------------CCCCcccccccC--ccccCcceEEe----------------------
Confidence 00 000000010000 00000011111
Q ss_pred eEEEEEcCCCCCCCccceeeEEEechhhHHHHHHHHhccCccEEEEecCeeecCCCCCCccccccCCCCCCCCCCcccCc
Q 004205 442 VGMILVDEPGKDVAIPFVIPSAVVGKKTGNKILSYISHTSKAISKIFPAKTVLGSEPAPRVAAFSSKGPNALNPEILKPD 521 (768)
Q Consensus 442 ~g~i~~n~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPD 521 (768)
.....+.++.||++|+.. +
T Consensus 260 -----------------------------------------------------A~~~~g~~a~yS~~G~~v--------~ 278 (600)
T 3hjr_A 260 -----------------------------------------------------ALNADGVRSSYSSVGSNI--------F 278 (600)
T ss_dssp -----------------------------------------------------EECTTSSBCTTCCBCTTC--------C
T ss_pred -----------------------------------------------------eecCCCCEeecccCCcce--------e
Confidence 123447789999999988 8
Q ss_pred eeeCCce-------EEEE-ecCC----------------------CCCcceEEeccccchhHHHHHHHHHHHHhCCCCCH
Q 004205 522 VTAPGLN-------IIAA-WSPA----------------------VGKMQFNILSGTSMACPHVTGIATLIKAVHPSWSP 571 (768)
Q Consensus 522 I~APG~~-------I~Sa-~~~~----------------------~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp 571 (768)
++|||.. +..+ .+.. ...+.|..++|||||||||||++|||+|++|+||+
T Consensus 279 ~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~ 358 (600)
T 3hjr_A 279 LSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSV 358 (600)
T ss_dssp EEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCH
T ss_pred eccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCH
Confidence 9999875 2222 2110 12346889999999999999999999999999999
Q ss_pred HHHHHHHHhhcccccCCCCCccCC-------------------CCCCCCCCCcccccccCccccCCCCeee
Q 004205 572 SAIKSAIMTTATALDKNHKPITVD-------------------PKGRRGNAFDYGSGFLNPRKVLSPGLIY 623 (768)
Q Consensus 572 ~~ik~~L~~TA~~~~~~g~p~~~~-------------------~~~~~~~~~~~G~G~vn~~~Al~~~l~~ 623 (768)
+|||++|++||++++....|+... ..........||+|++|+.+|++.+..|
T Consensus 359 ~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA~~aV~~A~~w 429 (600)
T 3hjr_A 359 RDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAANH 429 (600)
T ss_dssp HHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTTC
T ss_pred HHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccccCCceecHHHHHHHhhcC
Confidence 999999999999988766553211 0112223567999999999998754333
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.90 E-value=6.9e-25 Score=250.39 Aligned_cols=97 Identities=26% Similarity=0.347 Sum_probs=78.2
Q ss_pred ceeccCCCcEeeeeeecCCCCCHHHHHHHHHHHHH---cCCcEEEeccCCCCCC-CCCchhHHHHHHHHhhcCCcEEEEe
Q 004205 251 ARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIR---DGVHILSLSLGPEAPQ-GDYFSDAISIGSFHATSRGILVVAS 326 (768)
Q Consensus 251 ~~GVAP~A~L~~~kv~~~~g~~~~~i~~ai~~a~~---~g~dVIN~SlG~~~~~-~~~~~~~~~~a~~~a~~~Gi~vV~A 326 (768)
+.||||+|+|+.|++. ...++++++|+||++ ++++|||||||..... .......++.++.+|..+||+||+|
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~A 349 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAA 349 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4899999999999984 356789999999998 7899999999987411 0012346777788888999999999
Q ss_pred ccCCCC-C--------CCcccCCCceEEEcccCC
Q 004205 327 AGNEGN-E--------GSVTNLAPWMFTIAASST 351 (768)
Q Consensus 327 AGN~g~-~--------~~~~~~~p~vitVgAs~~ 351 (768)
|||+|. . ...|+.+|++++||+++.
T Consensus 350 sGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 350 AGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp CCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred cCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 999996 3 245678999999999763
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.86 E-value=4.5e-22 Score=216.55 Aligned_cols=100 Identities=19% Similarity=0.209 Sum_probs=80.5
Q ss_pred eeccCCCcEeeeeeecCCCCCHHHHHHHHHHHHH-cCCcEEEeccCCCCCC--CCCchhHHHHHHHHhhcCCcEEEEecc
Q 004205 252 RGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIR-DGVHILSLSLGPEAPQ--GDYFSDAISIGSFHATSRGILVVASAG 328 (768)
Q Consensus 252 ~GVAP~A~L~~~kv~~~~g~~~~~i~~ai~~a~~-~g~dVIN~SlG~~~~~--~~~~~~~~~~a~~~a~~~Gi~vV~AAG 328 (768)
..+||+|+++.|++.+..++..++++++|+||++ ++++|||||||..... .......++.++.+|..+||+||+|||
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 4578999999999987655777899999999998 8999999999976410 011235677888888899999999999
Q ss_pred CCCC-C-C------------CcccCCCceEEEcccCC
Q 004205 329 NEGN-E-G------------SVTNLAPWMFTIAASST 351 (768)
Q Consensus 329 N~g~-~-~------------~~~~~~p~vitVgAs~~ 351 (768)
|+|. . . ..|+.+|++++||+++.
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 9997 2 1 45678999999999764
No 37
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=99.02 E-value=2.6e-10 Score=102.20 Aligned_cols=81 Identities=14% Similarity=0.082 Sum_probs=67.6
Q ss_pred cCCCCcEEEEEeCCCCCCCCchhhHhHHHHHHHHhcCcccccccceEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEEe
Q 004205 32 ICFSAKVYVVYMGTTTGEDPLDVWRQHHQMLAVVHAGSMEQAQASHVYSYKHGFRGFAAKLTDQQASQIAQMPGVVSVFP 111 (768)
Q Consensus 32 ~~~~~~~yiV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~V~~ 111 (768)
....+++|||+|++... ......|.+|+.+++ .+ +....++.|+|++.|+||+++++++++++|+++|+|.+|||
T Consensus 33 ~~~ip~~YIV~lk~~~~---~~~~~~h~~~l~s~~-~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~ 107 (114)
T 2w2n_P 33 PWRLPGTYVVVLKEETH---LSQSERTARRLQAQA-AR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEE 107 (114)
T ss_dssp GGEEEEEEEEEECTTCC---HHHHHHHHHHHHHHH-HH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEE
T ss_pred ccCCCCcEEEEECCCCC---HHHHHHHHHHHHHHh-hh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEe
Confidence 34568999999998752 225668899999987 32 23567899999999999999999999999999999999999
Q ss_pred cceecc
Q 004205 112 NMKRRL 117 (768)
Q Consensus 112 ~~~~~~ 117 (768)
|+.++.
T Consensus 108 D~~v~~ 113 (114)
T 2w2n_P 108 DSSVFA 113 (114)
T ss_dssp EEEEEE
T ss_pred CceEec
Confidence 998764
No 38
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.00 E-value=1.2e-09 Score=123.96 Aligned_cols=99 Identities=14% Similarity=0.169 Sum_probs=63.8
Q ss_pred eeccCCCcEeeeeeecCCCCCHHHHHHHHHHHH--HcCCcEEEeccCCCCCC-CCCchhHHHHHHHHhhcCCcEEEEecc
Q 004205 252 RGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAI--RDGVHILSLSLGPEAPQ-GDYFSDAISIGSFHATSRGILVVASAG 328 (768)
Q Consensus 252 ~GVAP~A~L~~~kv~~~~g~~~~~i~~ai~~a~--~~g~dVIN~SlG~~~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAG 328 (768)
.+++++..++.|-..+. ....+.++..+++.. .+-++|||+|||..... +..+...+..++.++..+||.|++|+|
T Consensus 262 ~a~~~~i~~~~~~~~g~-~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASG 340 (544)
T 3edy_A 262 MSAGANISTWVYSSPGR-HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASG 340 (544)
T ss_dssp HHHSTTSEEEEECCCSC-CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hccCCCceEEEEecCCc-ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecC
Confidence 34455555555543211 111233444444433 24589999999987511 111234566777788899999999999
Q ss_pred CCCC-CC----------CcccCCCceEEEcccCC
Q 004205 329 NEGN-EG----------SVTNLAPWMFTIAASST 351 (768)
Q Consensus 329 N~g~-~~----------~~~~~~p~vitVgAs~~ 351 (768)
|+|. +. ..|+.+||+++||+++.
T Consensus 341 D~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 341 DSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp SSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 9997 42 45788999999999764
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.92 E-value=2.8e-09 Score=89.33 Aligned_cols=75 Identities=15% Similarity=0.129 Sum_probs=57.1
Q ss_pred CCCCcEEEEEeCCCCCCCCchhhHhHHHHHHHHhcCcccccccceEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEEec
Q 004205 33 CFSAKVYVVYMGTTTGEDPLDVWRQHHQMLAVVHAGSMEQAQASHVYSYKHGFRGFAAKLTDQQASQIAQMPGVVSVFPN 112 (768)
Q Consensus 33 ~~~~~~yiV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~V~~~ 112 (768)
...+++|||+||+.... . . .+. +++ ...+.++.++|.+ |+||+++++++++++|+++|+|.+||||
T Consensus 5 ~~i~~~YIV~~k~~~~~--~-~--~~~----~~~----~~~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D 70 (80)
T 3cnq_P 5 SNGEKKYIVGFKQGFKS--C-A--KKE----DVI----SEKGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEED 70 (80)
T ss_dssp ---CCEEEEEECTTCCS--H-H--HHH----HHH----HTTTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEEC
T ss_pred ccCCCCEEEEECCCCCh--H-H--HHH----HHH----HHcCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeC
Confidence 45689999999987532 1 1 122 222 1234689999998 9999999999999999999999999999
Q ss_pred ceeccCCCC
Q 004205 113 MKRRLHTTH 121 (768)
Q Consensus 113 ~~~~~~~~~ 121 (768)
+.++++++.
T Consensus 71 ~~v~~~tt~ 79 (80)
T 3cnq_P 71 KLYRALSAT 79 (80)
T ss_dssp CEEEECCC-
T ss_pred cEEEEeeec
Confidence 999887654
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.78 E-value=1.2e-08 Score=92.54 Aligned_cols=80 Identities=15% Similarity=0.096 Sum_probs=62.7
Q ss_pred CCCCcEEEEEeCCCCCCCCchhhHhHHHHHHHHhcCcccccccceEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEEec
Q 004205 33 CFSAKVYVVYMGTTTGEDPLDVWRQHHQMLAVVHAGSMEQAQASHVYSYKHGFRGFAAKLTDQQASQIAQMPGVVSVFPN 112 (768)
Q Consensus 33 ~~~~~~yiV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~V~~~ 112 (768)
...+++|||+||+... ......|.+++.++.+ ++....++.|+|++.|+||+++++++++++|+++|+|.+|+++
T Consensus 44 ~~Ip~~YIV~~K~~~~---~~~~~~~~~~l~~~~~--~r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D 118 (124)
T 2qtw_A 44 WRLPGTYVVVLKEETH---LSQSERTARRLQAQAA--RRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEED 118 (124)
T ss_dssp GEEEEEEEEEECTTCC---HHHHHHHHHHHHHHHH--HTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEE
T ss_pred cCCCCCEEEEECCCCC---HHHHHHHHHHHHHHHh--hcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeC
Confidence 4468999999998752 2244556666665441 1114568999999999999999999999999999999999999
Q ss_pred ceecc
Q 004205 113 MKRRL 117 (768)
Q Consensus 113 ~~~~~ 117 (768)
+.++.
T Consensus 119 ~~v~a 123 (124)
T 2qtw_A 119 SSVFA 123 (124)
T ss_dssp EEEEE
T ss_pred ceEec
Confidence 88764
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.73 E-value=5.4e-08 Score=80.40 Aligned_cols=71 Identities=18% Similarity=0.252 Sum_probs=57.6
Q ss_pred CcEEEEEeCCCCCCCCchhhHhHHHHHHHHhcCcccccccceEEEe-cceeeEEEEEeCHHHHHHHhcC--CCeEEEEec
Q 004205 36 AKVYVVYMGTTTGEDPLDVWRQHHQMLAVVHAGSMEQAQASHVYSY-KHGFRGFAAKLTDQQASQIAQM--PGVVSVFPN 112 (768)
Q Consensus 36 ~~~yiV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y-~~~~~g~s~~~~~~~~~~L~~~--p~V~~V~~~ 112 (768)
.++|||+||+.. +....+.|.++++... .++.+.| ...|+||++.++++++++|+++ |.|.+||+|
T Consensus 2 ~~sYIV~lk~~~---~~~~~~~~~~~~~~~g--------g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D 70 (76)
T 1v5i_B 2 AGKFIVIFKNDV---SEDKIRETKDEVIAEG--------GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEED 70 (76)
T ss_dssp CEEEEEEECTTC---CHHHHHHHHHHHHHHT--------CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEEC
T ss_pred CceEEEEECCCC---CHHHHHHHHHHHHhhC--------CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCC
Confidence 378999999875 2234556666666543 4688999 4799999999999999999999 889999999
Q ss_pred ceecc
Q 004205 113 MKRRL 117 (768)
Q Consensus 113 ~~~~~ 117 (768)
+.++.
T Consensus 71 ~~v~~ 75 (76)
T 1v5i_B 71 HVAHA 75 (76)
T ss_dssp CEEEC
T ss_pred cEEeC
Confidence 98764
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.55 E-value=3.1e-07 Score=89.28 Aligned_cols=91 Identities=18% Similarity=0.206 Sum_probs=73.4
Q ss_pred cCCccCcCCCCCCC-------CCCeEEEEeecCCCc-hhHHHHHHHHHHcCceEEEEEcCCC-CC----CC--ccceeeE
Q 004205 398 QSSYCLESSLNSTK-------ARGKVLVCRHAESST-ESKLRKSMVVKEAGGVGMILVDEPG-KD----VA--IPFVIPS 462 (768)
Q Consensus 398 ~~~~c~~~~~~~~~-------~~gkivl~~~~~~g~-~~~~~k~~~~~~~Ga~g~i~~n~~~-~~----~~--~~~~~p~ 462 (768)
....|.+..+.... .+|||+|++ ||+ |+|.+|+.+++++||.++|+||+.. +. +. ....+|+
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~---RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPs 158 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQ---RGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVA 158 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEE---SCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEE---CCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeE
Confidence 45789886643222 479999999 688 9999999999999999999999852 21 22 2346999
Q ss_pred EEechhhHHHHHHHHhccCccEEEEecCe
Q 004205 463 AVVGKKTGNKILSYISHTSKAISKIFPAK 491 (768)
Q Consensus 463 ~~i~~~~g~~l~~~~~~~~~~~~~i~~~~ 491 (768)
++|++.+|+.|++++.++...+++|....
T Consensus 159 v~Is~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 159 IMIGNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp EEECHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred EEECHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999999988888877654
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.38 E-value=0.0002 Score=56.88 Aligned_cols=62 Identities=15% Similarity=0.135 Sum_probs=50.4
Q ss_pred cEEEEEeCCCCCCCCchhhHhHHHHHHHHhcCcccccccceEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEEecceec
Q 004205 37 KVYVVYMGTTTGEDPLDVWRQHHQMLAVVHAGSMEQAQASHVYSYKHGFRGFAAKLTDQQASQIAQMPGVVSVFPNMKRR 116 (768)
Q Consensus 37 ~~yiV~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~L~~~p~V~~V~~~~~~~ 116 (768)
.+|||.|++.... .+.. ...+.++.++|. .++++++++|++.++.|+++|+|++|++|...+
T Consensus 2 ~~~IV~f~~~~~~-------------~~~i----~~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 2 IRVIVSVDKAKFN-------------PHEV----LGIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp EEEEEEECGGGCC-------------GGGG----GGGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred eeEEEEEcCcchh-------------HHHH----HHCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 5899999875210 0112 456789999997 899999999999999999999999999998765
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.44 E-value=0.0075 Score=66.48 Aligned_cols=71 Identities=11% Similarity=0.207 Sum_probs=59.0
Q ss_pred CCCCCCCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEEEEEcCCCCCC----C--ccceeeEEEechhhHHHHHHHHh
Q 004205 405 SSLNSTKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGMILVDEPGKDV----A--IPFVIPSAVVGKKTGNKILSYIS 478 (768)
Q Consensus 405 ~~~~~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~----~--~~~~~p~~~i~~~~g~~l~~~~~ 478 (768)
.++...+++|||+|+. +|.|.+.+|..+++++||.|+|++++..... . ....+|...++.++++.|+.++.
T Consensus 106 ~D~~~~dv~GkIvlv~---~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 106 ADVAGKDLNGKIALIQ---RGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTTTSCCTTSEEEEE---CCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred hhcCCCCcCceEEEEe---CCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 3444558999999999 6789999999999999999999999865431 1 23568999999999999999984
No 45
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.43 E-value=0.043 Score=49.11 Aligned_cols=75 Identities=19% Similarity=0.229 Sum_probs=55.6
Q ss_pred CccEEEEEEEEecCCCceeEEEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEecCCCCceEEEEEEEE-cCceEEEE
Q 004205 675 KGNFSVTRSVTNVGKPRSIYKAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKLTSPPKGYGFGYLSWK-NGKLRVTS 753 (768)
Q Consensus 675 ~~~~t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~i~~~-~~~~~v~~ 753 (768)
+...+.+++|+|.|+....|+..... -++++|..-++ ++||++.++|+|.+.. .+.+++.|.+. +++..+.+
T Consensus 40 ~~~~~~~~~l~N~g~~~~~f~~~~~~----~F~i~P~~g~L-~pg~~~~i~V~F~P~~--~g~~~~~l~v~~~~g~~~~v 112 (122)
T 2ys4_A 40 KYSTQKILLVRNIGNKNAVFHIKTCR----PFSIEPAIGTL-NVGESMQLEVEFEPQS--VGDHSGRLIVCYDTGEKVFV 112 (122)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEECCT----TEEEESSEEEE-CTTCEEEEEEEECCSS--SBCCCCBCEEEESSSCEECC
T ss_pred CCeEEEEEEEEECCCCCEEEEEecCC----CeEEECCcCEE-CCCCEEEEEEEEEcCC--CccEEEEEEEEECCCCEEEE
Confidence 56778889999999988888877543 27788999989 7899999999998753 34466666655 44445555
Q ss_pred EEE
Q 004205 754 PLV 756 (768)
Q Consensus 754 P~~ 756 (768)
++.
T Consensus 113 ~L~ 115 (122)
T 2ys4_A 113 SLY 115 (122)
T ss_dssp EEC
T ss_pred EEE
Confidence 543
No 46
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=94.94 E-value=0.072 Score=58.97 Aligned_cols=79 Identities=15% Similarity=0.214 Sum_probs=57.6
Q ss_pred CCCCCCCeEEEEeecCCCch---------hHHHH----HHHHHHcCceEEEEEcCCCCC--------CC---ccceeeEE
Q 004205 408 NSTKARGKVLVCRHAESSTE---------SKLRK----SMVVKEAGGVGMILVDEPGKD--------VA---IPFVIPSA 463 (768)
Q Consensus 408 ~~~~~~gkivl~~~~~~g~~---------~~~~k----~~~~~~~Ga~g~i~~n~~~~~--------~~---~~~~~p~~ 463 (768)
...+++|||||+.+ +.| .+..| ..++.++||.|+|++++.... .. ....+|++
T Consensus 123 ~~~dvkGKIVlv~~---~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~ 199 (444)
T 3iib_A 123 EAGSLNDKIAFIDA---KTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAA 199 (444)
T ss_dssp CTTTTTTCEEEECC---CCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEE
T ss_pred cccccCccEEEEeC---CCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeE
Confidence 35689999999985 444 24444 457899999999999865432 11 12468999
Q ss_pred EechhhHHHHHHHHhccCccEEEEec
Q 004205 464 VVGKKTGNKILSYISHTSKAISKIFP 489 (768)
Q Consensus 464 ~i~~~~g~~l~~~~~~~~~~~~~i~~ 489 (768)
.|+.++++.|+..+..+....+++..
T Consensus 200 ~Is~~da~~L~~~l~~g~~~~v~l~~ 225 (444)
T 3iib_A 200 AISNPDADLINAMLKRDKEVVISLEL 225 (444)
T ss_dssp EECHHHHHHHHHHHTTTCCCEEEEEE
T ss_pred EecHHHHHHHHHHHhCCCCeEEEEEE
Confidence 99999999999999876555555543
No 47
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=94.59 E-value=0.061 Score=62.06 Aligned_cols=66 Identities=14% Similarity=0.255 Sum_probs=54.1
Q ss_pred CCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEEEEEcCCCCC-C---------------C------------------
Q 004205 410 TKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGMILVDEPGKD-V---------------A------------------ 455 (768)
Q Consensus 410 ~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~-~---------------~------------------ 455 (768)
.+++|||+|+. +|.|.+.+|..+++++||.|+|+|++.... . .
T Consensus 128 vdv~GkIvlv~---~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~ 204 (640)
T 3kas_A 128 TPVNGSIVIVR---AGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPS 204 (640)
T ss_dssp SCCTTSEEEEE---SCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCC
T ss_pred cccCCcEEEEe---cCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCcccccccccccc
Confidence 58999999999 678999999999999999999999875321 0 0
Q ss_pred ---ccceeeEEEechhhHHHHHHHHh
Q 004205 456 ---IPFVIPSAVVGKKTGNKILSYIS 478 (768)
Q Consensus 456 ---~~~~~p~~~i~~~~g~~l~~~~~ 478 (768)
....+|+..|+.++++.|+..+.
T Consensus 205 ~~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 205 RSSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp SSCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred cccCCCCCCEEecCHHHHHHHHHHcc
Confidence 01258999999999999988764
No 48
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.52 E-value=0.034 Score=64.82 Aligned_cols=68 Identities=24% Similarity=0.379 Sum_probs=55.1
Q ss_pred CCCCCCeEEEEeecCCCchhHHHHHHHHHHcCceEEEEEcCCC-----C------------------CC------Cc---
Q 004205 409 STKARGKVLVCRHAESSTESKLRKSMVVKEAGGVGMILVDEPG-----K------------------DV------AI--- 456 (768)
Q Consensus 409 ~~~~~gkivl~~~~~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~-----~------------------~~------~~--- 456 (768)
..+++|||+|++ +|.|.+.+|+.+++++||.|+|+|++.. + .. .+
T Consensus 150 ~~~v~GkIvlv~---~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~T 226 (707)
T 3fed_A 150 GINCTGKIVIAR---YGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLT 226 (707)
T ss_dssp CCCCTTCEEEEE---CCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTC
T ss_pred CCCCCCeEEEEE---CCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCC
Confidence 568999999999 6789999999999999999999998621 0 00 00
Q ss_pred -------------------cceeeEEEechhhHHHHHHHHhc
Q 004205 457 -------------------PFVIPSAVVGKKTGNKILSYISH 479 (768)
Q Consensus 457 -------------------~~~~p~~~i~~~~g~~l~~~~~~ 479 (768)
.-.||+..|+..+++.|+..+..
T Consensus 227 PG~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 227 PGYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp TTSCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred CCCcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 13589999999999999998754
No 49
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=93.89 E-value=0.53 Score=43.03 Aligned_cols=87 Identities=7% Similarity=-0.004 Sum_probs=63.3
Q ss_pred CccEEEEEEEEecCCCceeEEEEEeCC----CceEEEEecCEEEEcCCCeEEEEEEEEEecC-----CC--CceEEEEEE
Q 004205 675 KGNFSVTRSVTNVGKPRSIYKAVVSSP----VGVTVTVAPERLIFNSYGQKINFTVHFKLTS-----PP--KGYGFGYLS 743 (768)
Q Consensus 675 ~~~~t~~~tv~N~~~~~~ty~~~~~~~----~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~-----~~--~~~~~G~i~ 743 (768)
....+-++||+|.|.-..+|++..... ..--++++|..-++ .+|++++++|++.++. ++ ..-++--|+
T Consensus 42 ~~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLv 120 (140)
T 3qbt_B 42 RQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILV 120 (140)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEE
T ss_pred eeeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEE
Confidence 345677789999999999999974321 11236778999989 7899999999998642 11 123456666
Q ss_pred EE-cCceEEEEEEEEEEecC
Q 004205 744 WK-NGKLRVTSPLVVQVAPS 762 (768)
Q Consensus 744 ~~-~~~~~v~~P~~~~~~~~ 762 (768)
+. .++....+|+...+.||
T Consensus 121 L~Ve~G~d~fI~v~g~~~ps 140 (140)
T 3qbt_B 121 LHLDRGKDYFLTISGNYLPS 140 (140)
T ss_dssp EEETTSCEEEEEEEEEECCC
T ss_pred EEeecCCcEEEEEeccccCC
Confidence 65 56678899999988775
No 50
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=90.65 E-value=0.12 Score=57.05 Aligned_cols=47 Identities=21% Similarity=0.336 Sum_probs=33.0
Q ss_pred CCCCCccccccCCCCCCCCCCcccCceeeCCceEEEEecCCCCCcceEEeccccc
Q 004205 496 SEPAPRVAAFSSKGPNALNPEILKPDVTAPGLNIIAAWSPAVGKMQFNILSGTSM 550 (768)
Q Consensus 496 ~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~Sa~~~~~~~~~y~~~sGTSm 550 (768)
....+.++.||++|+.. ||+|||++|+++++..++......+.|+||
T Consensus 180 ~~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~g~g~~~~~~~~G~s~ 226 (441)
T 1y9z_A 180 VDSNLDHAAFSQYTDQV--------EISGPGEAILSTVTVGEGRLADITIGGQSY 226 (441)
T ss_dssp ECTTCCBCTTSCCCTTE--------EEEEECSSEEEECSTTCEEEEEEEETTEEC
T ss_pred ECCCCCCCccccCCCce--------EEEeccCCeeccccCCCcccceeecccccc
Confidence 34557899999999876 999999999999874222112234555554
No 51
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.40 E-value=1.4 Score=38.18 Aligned_cols=81 Identities=11% Similarity=0.060 Sum_probs=54.5
Q ss_pred CccEEEEEEEEecCCCceeEEEEEeC-CCceEEEEecCEEEEcCCCeEEEEEEEEEecCCCCceEEEEEEEEc-C-ceEE
Q 004205 675 KGNFSVTRSVTNVGKPRSIYKAVVSS-PVGVTVTVAPERLIFNSYGQKINFTVHFKLTSPPKGYGFGYLSWKN-G-KLRV 751 (768)
Q Consensus 675 ~~~~t~~~tv~N~~~~~~ty~~~~~~-~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~i~~~~-~-~~~v 751 (768)
....+.+++++|.|+....|+..... ..+..++++|..-.+ ++|++++|+|+|.+... +.+.=.|++.- + ...+
T Consensus 25 g~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~~--g~f~~~i~v~~~g~~~~~ 101 (112)
T 2e6j_A 25 GSAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSIIL--GNFEEEFLVNVNGSPEPV 101 (112)
T ss_dssp SCCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCCC--EEEEEEECEEESSCSSCC
T ss_pred CCEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCCc--ceEEEEEEEEECCCCceE
Confidence 44577789999999999999984211 112347778999888 68999999999987543 34445566653 2 2334
Q ss_pred EEEEEEE
Q 004205 752 TSPLVVQ 758 (768)
Q Consensus 752 ~~P~~~~ 758 (768)
++-+-..
T Consensus 102 ~L~i~G~ 108 (112)
T 2e6j_A 102 KLTIRGC 108 (112)
T ss_dssp CEEEEEE
T ss_pred EEEEEEE
Confidence 4444443
No 52
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=85.02 E-value=5.2 Score=35.08 Aligned_cols=53 Identities=15% Similarity=0.125 Sum_probs=42.9
Q ss_pred cEEEEEEEEecCCCceeEEEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEec
Q 004205 677 NFSVTRSVTNVGKPRSIYKAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKLT 731 (768)
Q Consensus 677 ~~t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~ 731 (768)
.-.+++.|.|......+|.+++...+|+++. .+..+++ ++|+..++.|.+..+
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~ 84 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGAD 84 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEEC
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEEC
Confidence 3567799999999999999999887776553 2556777 789999999999875
No 53
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=84.89 E-value=0.43 Score=58.80 Aligned_cols=24 Identities=13% Similarity=0.418 Sum_probs=21.8
Q ss_pred CCCCCcceEEEEEeCCCCCCCCCCC
Q 004205 140 STKNQVNIIVGFIDTGIWPESPSFS 164 (768)
Q Consensus 140 ~~~Gg~GV~VgVIDtGid~~Hp~f~ 164 (768)
.+.| +||+|||+|||||+.+|.|.
T Consensus 32 ~ydG-rgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDG-RDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSS-TTCEEEEEESCCCTTSTTSS
T ss_pred CCCC-CccEEEEEeCCCCCCCCcce
Confidence 4678 99999999999999999994
No 54
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=84.85 E-value=6.5 Score=41.92 Aligned_cols=91 Identities=8% Similarity=0.017 Sum_probs=66.2
Q ss_pred CccEEEEEEEEecCCCceeEEEEEeCCCceE----EEEecCEEEEcCCCeEEEEEEEEEecCC-----C--CceEEEEEE
Q 004205 675 KGNFSVTRSVTNVGKPRSIYKAVVSSPVGVT----VTVAPERLIFNSYGQKINFTVHFKLTSP-----P--KGYGFGYLS 743 (768)
Q Consensus 675 ~~~~t~~~tv~N~~~~~~ty~~~~~~~~g~~----v~~~p~~~~~~~~~~~~~~~vt~~~~~~-----~--~~~~~G~i~ 743 (768)
....+-++||+|.|.-..+|++.-....... ++++|..-++ .+|++++++|++.++.. . ..-.+--|+
T Consensus 45 ~~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diLv 123 (366)
T 3qis_A 45 RQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILV 123 (366)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEEE
T ss_pred CCeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccccceEEE
Confidence 3566777899999999999999654322222 7788999888 78999999999987531 1 223455566
Q ss_pred EE-cCceEEEEEEEEEEecCccCc
Q 004205 744 WK-NGKLRVTSPLVVQVAPSDMGL 766 (768)
Q Consensus 744 ~~-~~~~~v~~P~~~~~~~~~~~~ 766 (768)
+. .++...-+|+-+.+.++-|+.
T Consensus 124 L~ve~G~d~FI~v~~~~~~s~FG~ 147 (366)
T 3qis_A 124 LHLDRGKDYFLTISGNYLPSCFGT 147 (366)
T ss_dssp EEETTSCEEEEEEEEEECCCSTTS
T ss_pred EEEeCCCcEEEEeccccCCccccC
Confidence 65 456677889988888887764
No 55
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=82.77 E-value=6.5 Score=38.58 Aligned_cols=84 Identities=11% Similarity=0.001 Sum_probs=57.1
Q ss_pred ccEEEEEEEEecCCCceeEEEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEecCCC-CceEEEEEEEEc----C-c-
Q 004205 676 GNFSVTRSVTNVGKPRSIYKAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKLTSPP-KGYGFGYLSWKN----G-K- 748 (768)
Q Consensus 676 ~~~t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~~~-~~~~~G~i~~~~----~-~- 748 (768)
...+.+++++|.|+.+.+++... .|.-.++ .+..-.+ ++|++.+++|+++..... -+...+.|++.. + .
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~--~~~~~~I-~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~~~~ 94 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LPSFVSL--DDRAFRL-QAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETGKK 94 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CCTTEEC--SCCEEEE-CSSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTTCCE
T ss_pred CcceEEEEEEeCCCCceEEEecc-CCCceEe--eeCccee-CCCCceEEEEEEcchhcccCCceeeEEEEEEEcCCCCcc
Confidence 34566789999999998888753 3554444 3333445 789999999999876543 356677777763 2 2
Q ss_pred eEEEEEEEEEEecCc
Q 004205 749 LRVTSPLVVQVAPSD 763 (768)
Q Consensus 749 ~~v~~P~~~~~~~~~ 763 (768)
...++|+.....+.+
T Consensus 95 ~~~~i~v~g~v~p~~ 109 (220)
T 2qsv_A 95 AVDSVMVSLPLVDNF 109 (220)
T ss_dssp EEEEEEEEEEECCCG
T ss_pred cccEEEEEEEEcccc
Confidence 245888887776654
No 56
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=62.73 E-value=26 Score=30.93 Aligned_cols=53 Identities=13% Similarity=0.229 Sum_probs=43.5
Q ss_pred CccEEEEEEEEecCCCceeEEEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEe
Q 004205 675 KGNFSVTRSVTNVGKPRSIYKAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKL 730 (768)
Q Consensus 675 ~~~~t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~ 730 (768)
....+-.++|+|.++...-|.+....|.- ..|.|..=.+ .++++.++.|++.+
T Consensus 26 ~~~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~ 78 (128)
T 1z9l_A 26 TDVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQP 78 (128)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECC
T ss_pred CceEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECc
Confidence 45567779999999999999998877664 5667887666 78999999999986
No 57
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=61.86 E-value=24 Score=31.16 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=43.2
Q ss_pred CccEEEEEEEEecCCCceeEEEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEe
Q 004205 675 KGNFSVTRSVTNVGKPRSIYKAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKL 730 (768)
Q Consensus 675 ~~~~t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~ 730 (768)
....+-.++|+|.++...-|.+....|.- ..|.|..=.+ .++++..+.|++.+
T Consensus 24 ~~~~~~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 24 DDKHTYHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp SSCCCEEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEE-CTTCEEEEEEEECC
T ss_pred CcceEEEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEE-CCCCEEEEEEEecC
Confidence 34556679999999999999999877765 5667887767 78999999999886
No 58
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=61.83 E-value=35 Score=30.21 Aligned_cols=52 Identities=13% Similarity=0.003 Sum_probs=36.2
Q ss_pred CccEEEEEEEEecCCCc-eeEEEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEe
Q 004205 675 KGNFSVTRSVTNVGKPR-SIYKAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKL 730 (768)
Q Consensus 675 ~~~~t~~~tv~N~~~~~-~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~ 730 (768)
....++++||+|.|... ..|++.+-. .|..+.-. .+.+ ++|++++|+++..+
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 45789999999999754 567777643 44444332 3345 78999988888764
No 59
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=60.51 E-value=62 Score=28.33 Aligned_cols=70 Identities=16% Similarity=0.122 Sum_probs=44.4
Q ss_pred CccEEEEEEEEecCCCcee--------EEEEEeCCCceEEEE---------ecCEEEEcCCCeEEEEEEEEEecCCCCce
Q 004205 675 KGNFSVTRSVTNVGKPRSI--------YKAVVSSPVGVTVTV---------APERLIFNSYGQKINFTVHFKLTSPPKGY 737 (768)
Q Consensus 675 ~~~~t~~~tv~N~~~~~~t--------y~~~~~~~~g~~v~~---------~p~~~~~~~~~~~~~~~vt~~~~~~~~~~ 737 (768)
.+...++++|+|.++...+ |.+.+....|-.|-- .....++ ++||+++|+++......++.|
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~~~~pG~Y 95 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKEVPEPGTY 95 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESSCCCSEEE
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCCCCCCccE
Confidence 4678899999999986544 455555555654431 1224456 789999999999731123334
Q ss_pred -EEEEEEEE
Q 004205 738 -GFGYLSWK 745 (768)
Q Consensus 738 -~~G~i~~~ 745 (768)
+.+++.-.
T Consensus 96 tl~a~l~~~ 104 (120)
T 3isy_A 96 EVKVTFKGR 104 (120)
T ss_dssp EEEEEECCE
T ss_pred EEEEEEEee
Confidence 56666544
No 60
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=59.65 E-value=42 Score=29.19 Aligned_cols=50 Identities=16% Similarity=0.098 Sum_probs=40.6
Q ss_pred EEEEEEEecCCCceeEEEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEec
Q 004205 679 SVTRSVTNVGKPRSIYKAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKLT 731 (768)
Q Consensus 679 t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~ 731 (768)
+.+++|+|.++....|.+....+.- ..|.|..=.+ ++|++.++.|+..+.
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~--YrVrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEH--YRVRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTT--EEEECSEEEE-CTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCc--eEEcCCceEE-CCCCeEEEEEEeCCC
Confidence 5669999999999999998776654 5666886666 789999999999864
No 61
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=58.66 E-value=27 Score=32.02 Aligned_cols=54 Identities=22% Similarity=0.199 Sum_probs=43.4
Q ss_pred CccEEEEEEEEecCCCceeEEEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEec
Q 004205 675 KGNFSVTRSVTNVGKPRSIYKAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKLT 731 (768)
Q Consensus 675 ~~~~t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~ 731 (768)
....+-.++|+|.++...-|.+....|.- ..|.|..=.+ .++++.+|+|++.+.
T Consensus 34 ~~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 34 SGEKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp SSCCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred CceEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 34445679999999999999999877764 5667887767 789999999999763
No 62
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=54.61 E-value=48 Score=28.45 Aligned_cols=49 Identities=16% Similarity=0.134 Sum_probs=40.2
Q ss_pred EEEEEEEecCCCceeEEEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEe
Q 004205 679 SVTRSVTNVGKPRSIYKAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKL 730 (768)
Q Consensus 679 t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~ 730 (768)
+.+++|+|.++....|.+....|.- ..|.|..=.+ ++|++.++.|+..+
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~--y~VrP~~G~I-~P~~~~~i~I~~q~ 66 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNE--YRIAPVFGFV-DPSGSKDVVITRTA 66 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSS--EEEECSEEEE-CTTEEEEEEEEECS
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCc--eEEcCCceEE-CCCCeEEEEEEeCC
Confidence 4568999999999999998776654 5667887666 78999999999876
No 63
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=52.65 E-value=32 Score=31.25 Aligned_cols=53 Identities=15% Similarity=0.234 Sum_probs=42.9
Q ss_pred CccEEEEEEEEecCCCceeEEEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEe
Q 004205 675 KGNFSVTRSVTNVGKPRSIYKAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKL 730 (768)
Q Consensus 675 ~~~~t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~ 730 (768)
....+-.++|+|.++...-|.+....|.- ..|.|..=.+ +++++.+|.|++.+
T Consensus 30 ~~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~ 82 (147)
T 2cri_A 30 TDVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQP 82 (147)
T ss_dssp SSCCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECC
T ss_pred CceEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECC
Confidence 34556679999999999999999887765 5667887656 78999999999986
No 64
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=51.90 E-value=1e+02 Score=29.82 Aligned_cols=78 Identities=12% Similarity=-0.010 Sum_probs=47.0
Q ss_pred ccEEEEEEEEecCCCceeEEEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEecCCCCce----EEEEEEEEcC--ce
Q 004205 676 GNFSVTRSVTNVGKPRSIYKAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKLTSPPKGY----GFGYLSWKNG--KL 749 (768)
Q Consensus 676 ~~~t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~~~~~~----~~G~i~~~~~--~~ 749 (768)
...+.+++++|.|+.....+-....-.-..+... .-.+ ++||+.+++|++++... .+. ....|++... ..
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~~v~~scgct~~~~~--~~~i-~PGe~~~i~v~~~~~~~-~g~~~~~~~~~i~v~~N~~~~ 209 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLHSVTTRNPALTAVPD--RTEI-KPGGSTLLRIAVDPQVM-KAEGWQSIAADISIICNDPQA 209 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEEEEEECSTTEEEEES--CSEE-CTTCEEEEEEEECHHHH-HHTTCSEEEEEEEEEESCTTC
T ss_pred CeEEEEEEEEECCCCCEEEEEEEeCCCCEeeecC--CccC-CCCCEEEEEEEEecCCC-CCcccceeccEEEEEECCCCC
Confidence 4567789999999988776432222222333332 2345 78999999999986533 233 5667766532 22
Q ss_pred -EEEEEEEE
Q 004205 750 -RVTSPLVV 757 (768)
Q Consensus 750 -~v~~P~~~ 757 (768)
.+++.+.+
T Consensus 210 p~~~l~i~~ 218 (220)
T 2qsv_A 210 PLRRIKVKA 218 (220)
T ss_dssp SEEEEEEEE
T ss_pred cEEEEEEEE
Confidence 44555543
No 65
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=49.15 E-value=44 Score=38.80 Aligned_cols=54 Identities=19% Similarity=0.162 Sum_probs=34.4
Q ss_pred ccEEEEEEEEecCCCceeEEEEE--eCCCce------EEEEecCEEEEcCCCeEEEEEEEEEec
Q 004205 676 GNFSVTRSVTNVGKPRSIYKAVV--SSPVGV------TVTVAPERLIFNSYGQKINFTVHFKLT 731 (768)
Q Consensus 676 ~~~t~~~tv~N~~~~~~ty~~~~--~~~~g~------~v~~~p~~~~~~~~~~~~~~~vt~~~~ 731 (768)
...+++++|+|+|+..-.-.+.+ ..|.+. .+.- =.++.+ ++||+++++++++..
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~g-F~kv~L-~pGes~~V~~~l~~~ 674 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRG-FAKLNL-TPGQSGTATFNIRRR 674 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEE-EEEEEE-CTTCEEEEEEEEEGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhh-ccccee-CCCCeEEEEEEEcHH
Confidence 35788899999998665554443 444321 1111 112345 799999999999865
No 66
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=47.03 E-value=1.2e+02 Score=32.00 Aligned_cols=83 Identities=14% Similarity=0.143 Sum_probs=50.7
Q ss_pred ccEEEEEEEEecCCCcee---EEE-EE--eC----------------CCceEEEEecCEEEEcCCCeEEEEEEEEEec--
Q 004205 676 GNFSVTRSVTNVGKPRSI---YKA-VV--SS----------------PVGVTVTVAPERLIFNSYGQKINFTVHFKLT-- 731 (768)
Q Consensus 676 ~~~t~~~tv~N~~~~~~t---y~~-~~--~~----------------~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~-- 731 (768)
...+++++|||.|++... |+. .+ -. ..| ++ +|+ -+ .+||+++++|+++-.
T Consensus 298 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI-~PGETrt~~V~a~da~W 371 (419)
T 3rfr_A 298 RELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VI-APGESKEIVVKIQDARW 371 (419)
T ss_dssp SEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CB-CTTCEEEEEEEEECHHH
T ss_pred cEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--Cc-CCCcceEEEEEeehHHH
Confidence 567888999999997653 211 11 10 112 33 455 34 689999999999832
Q ss_pred ---CC------CCceEEEEEEEEcC-ceEEEEEEEEEEecCcc
Q 004205 732 ---SP------PKGYGFGYLSWKNG-KLRVTSPLVVQVAPSDM 764 (768)
Q Consensus 732 ---~~------~~~~~~G~i~~~~~-~~~v~~P~~~~~~~~~~ 764 (768)
.+ .....-|-|.|.|. +++.-+.+...++|.|.
T Consensus 372 eveRL~~l~~D~dSrfgGLLfF~d~~G~r~i~~I~~pvIP~F~ 414 (419)
T 3rfr_A 372 DIERLSDLAYDTDSQVGGLLFFFTPDGKRFAAEIGGPVIPKFV 414 (419)
T ss_dssp HHTTGGGGGGSSSCEEEEEEEEECSSSCEEEEEEEEECEEEC-
T ss_pred HHHHHhhhhcCchhheeEEEEEEcCCCCEEEEeccCcccceec
Confidence 12 23345677777765 56666666666666654
No 67
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=46.79 E-value=17 Score=42.31 Aligned_cols=66 Identities=15% Similarity=0.321 Sum_probs=39.4
Q ss_pred CCCCCeEEecCC-----CccEEEEEEEEecCCCceeEEEE--EeCCCceEEEEecC-------EE-EEcCCCeEEEEEEE
Q 004205 663 DLNYPSITVPNL-----KGNFSVTRSVTNVGKPRSIYKAV--VSSPVGVTVTVAPE-------RL-IFNSYGQKINFTVH 727 (768)
Q Consensus 663 ~ln~ps~~~~~~-----~~~~t~~~tv~N~~~~~~ty~~~--~~~~~g~~v~~~p~-------~~-~~~~~~~~~~~~vt 727 (768)
-|.|.+|...++ .+..+++++|+|+|+....-.+. +..|.+- +. .|. ++ .+ ++||+++++++
T Consensus 597 GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~-~~-~P~k~L~gF~kv~~L-~pGes~~V~~~ 673 (721)
T 2x41_A 597 GLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGK-ID-KPFQELKAFHKTRLL-NPGESEEVVLE 673 (721)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSS-SC-CCSCEEEEEEECCCB-CTTCEEEEEEE
T ss_pred CCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCC-CC-CchHHhhcccccccC-CCCCeEEEEEE
Confidence 455555554443 34578999999999854443333 3444321 10 111 22 23 78999999999
Q ss_pred EEec
Q 004205 728 FKLT 731 (768)
Q Consensus 728 ~~~~ 731 (768)
++..
T Consensus 674 l~~~ 677 (721)
T 2x41_A 674 IPVR 677 (721)
T ss_dssp EEGG
T ss_pred ECHH
Confidence 9864
No 68
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=44.55 E-value=1.4e+02 Score=33.32 Aligned_cols=86 Identities=10% Similarity=0.024 Sum_probs=51.9
Q ss_pred CCeEEecCCCccEEEEEEEEecCCCceeE-EEEEeCCCceEEEEecCEEEEcCCCeEEEEEEEEEecC-CCCceEEEEEE
Q 004205 666 YPSITVPNLKGNFSVTRSVTNVGKPRSIY-KAVVSSPVGVTVTVAPERLIFNSYGQKINFTVHFKLTS-PPKGYGFGYLS 743 (768)
Q Consensus 666 ~ps~~~~~~~~~~t~~~tv~N~~~~~~ty-~~~~~~~~g~~v~~~p~~~~~~~~~~~~~~~vt~~~~~-~~~~~~~G~i~ 743 (768)
.|.+++.. .++.+++++|+|-+.....- ++++..+.+.+++. ....+ ++|++.+++|+|+.+. ...+.+.=.+.
T Consensus 364 ~~~~~~~~-g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~~~~~g~y~l~~~ 439 (601)
T 1w8o_A 364 IPDVALEP-GQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPAGTTPGRYRVGAT 439 (601)
T ss_dssp CCCEEECT-TCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCTTCCCEEEEEEEE
T ss_pred CccceecC-CceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCCCCCCCcEEeeEE
Confidence 45566543 35788889999976643322 34456688887776 23445 6799999988888753 23344444455
Q ss_pred EEcCceEEEEEE
Q 004205 744 WKNGKLRVTSPL 755 (768)
Q Consensus 744 ~~~~~~~v~~P~ 755 (768)
+......+...+
T Consensus 440 ~~~~~~~~s~~~ 451 (601)
T 1w8o_A 440 LRTSAGNASTTF 451 (601)
T ss_dssp EEETTEEEEEEE
T ss_pred EEecCceeEEEE
Confidence 655433344333
No 69
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=43.53 E-value=51 Score=39.09 Aligned_cols=69 Identities=19% Similarity=0.290 Sum_probs=42.2
Q ss_pred CCCCCCCeEEec--CC---CccEEEEEEEEecC-CCceeEEEEE--eCCCc-e-----EEEEecCEEEEcCCCeEEEEEE
Q 004205 661 PYDLNYPSITVP--NL---KGNFSVTRSVTNVG-KPRSIYKAVV--SSPVG-V-----TVTVAPERLIFNSYGQKINFTV 726 (768)
Q Consensus 661 ~~~ln~ps~~~~--~~---~~~~t~~~tv~N~~-~~~~ty~~~~--~~~~g-~-----~v~~~p~~~~~~~~~~~~~~~v 726 (768)
..-|.|.+|... ++ .+..+++++|+|+| +....-.+.+ ..|.+ + .+.- =.++.+ ++||++++++
T Consensus 715 G~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~L-~pGes~~V~~ 792 (845)
T 3abz_A 715 GYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKG-FEKVHL-EPGEKKTVNI 792 (845)
T ss_dssp TCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEE-EEEEEE-CTTCEEEEEE
T ss_pred cCCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheecc-ceeEEE-CCCCEEEEEE
Confidence 345667677666 43 35688999999999 7554444433 33322 1 1111 112345 7999999999
Q ss_pred EEE-ec
Q 004205 727 HFK-LT 731 (768)
Q Consensus 727 t~~-~~ 731 (768)
+++ ..
T Consensus 793 ~l~~~~ 798 (845)
T 3abz_A 793 DLELKD 798 (845)
T ss_dssp EEEHHH
T ss_pred EeCChH
Confidence 998 54
No 70
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=43.13 E-value=2.2e+02 Score=29.66 Aligned_cols=84 Identities=15% Similarity=0.122 Sum_probs=49.0
Q ss_pred ccEEEEEEEEecCCCceeEEEEEeCCCceE----------------------EEEecCEEEEcCCCeEEEEEEEEEec--
Q 004205 676 GNFSVTRSVTNVGKPRSIYKAVVSSPVGVT----------------------VTVAPERLIFNSYGQKINFTVHFKLT-- 731 (768)
Q Consensus 676 ~~~t~~~tv~N~~~~~~ty~~~~~~~~g~~----------------------v~~~p~~~~~~~~~~~~~~~vt~~~~-- 731 (768)
...+++++|||.|++...--= =..+++. ++|+|+.- + .+||+++++|+++-.
T Consensus 264 R~l~~~~~VtN~g~~pvrlge--F~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~p-I-~PGETr~~~v~a~da~W 339 (382)
T 1yew_A 264 RAMRMKLTITNHGNSPIRLGE--FYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSP-L-APGETRTVDVTASDAAW 339 (382)
T ss_dssp SEEEEEEEEEECSSSCEEEEE--EECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSC-B-CTTCEEEEEEEEECHHH
T ss_pred cEEEEEEEEEcCCCCceEeee--EEeccEEEeCCcccccCCCChHHhhccCCceeCCCCC-c-CCCceeEEEEEeehHHH
Confidence 467888999999987643110 0011211 34444432 2 589999999999832
Q ss_pred ---CC------CCceEEEEEEEEcC-ceEEEEEEEEEEecCc
Q 004205 732 ---SP------PKGYGFGYLSWKNG-KLRVTSPLVVQVAPSD 763 (768)
Q Consensus 732 ---~~------~~~~~~G~i~~~~~-~~~v~~P~~~~~~~~~ 763 (768)
.+ .....-|-|.|.|. +++.-+.|..-++|.+
T Consensus 340 eveRL~~l~~D~dSrfgGLLfF~d~~G~r~~~~I~~pvIP~F 381 (382)
T 1yew_A 340 EVYRLSDIIYDPDSRFAGLLFFFDATGNRQVVQIDAPLIPSF 381 (382)
T ss_dssp HHTCGGGGGGSSCCEEEEEEEEEETTSCEEEEEEEEECEEEC
T ss_pred HHHHhhhhhcCcccceeEEEEEEcCCCCEEEEeccCcccccc
Confidence 22 13345566777765 5666666665556543
No 71
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=40.47 E-value=5.8 Score=34.87 Aligned_cols=53 Identities=19% Similarity=0.243 Sum_probs=35.3
Q ss_pred EEEEEEEEecCCCceeEEEEEe-CCCceEEEEecCEEEEc-CCCeEEEEEEEEEe
Q 004205 678 FSVTRSVTNVGKPRSIYKAVVS-SPVGVTVTVAPERLIFN-SYGQKINFTVHFKL 730 (768)
Q Consensus 678 ~t~~~tv~N~~~~~~ty~~~~~-~~~g~~v~~~p~~~~~~-~~~~~~~~~vt~~~ 730 (768)
..+..-++|.+.+..+..+.++ .|.|++++++|..+++. ..-++++|.|++..
T Consensus 55 i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~ 109 (119)
T 2kq1_A 55 YEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEM 109 (119)
T ss_dssp CEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCC
T ss_pred EEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEE
Confidence 3444555566554445555566 68899999999998876 44566777777654
No 72
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=35.45 E-value=89 Score=26.18 Aligned_cols=51 Identities=18% Similarity=0.203 Sum_probs=29.3
Q ss_pred ccEEEEEEEEecCCCceeE----EEE-------E--eCCCceEEEEe-cCEEEEcCCCeEEEEEEE
Q 004205 676 GNFSVTRSVTNVGKPRSIY----KAV-------V--SSPVGVTVTVA-PERLIFNSYGQKINFTVH 727 (768)
Q Consensus 676 ~~~t~~~tv~N~~~~~~ty----~~~-------~--~~~~g~~v~~~-p~~~~~~~~~~~~~~~vt 727 (768)
+..+++++|+|.|+.+... .+- . ....|..+.+- -+.+.| ++||++++++.
T Consensus 18 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF-EPG~~r~V~LV 82 (101)
T 4ep8_B 18 GRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRF-EPGQKREVELV 82 (101)
T ss_dssp TCCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEE-CTTCEEEEEEE
T ss_pred CCCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEee-CCCCeEEEEEE
Confidence 5567889999999976321 110 0 11224333331 134566 78999887664
No 73
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=35.27 E-value=22 Score=26.94 Aligned_cols=36 Identities=14% Similarity=0.115 Sum_probs=27.2
Q ss_pred cchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhhccc
Q 004205 549 SMACPHVTGIATLIKAVHPSWSPSAIKSAIMTTATA 584 (768)
Q Consensus 549 SmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~ 584 (768)
|-..|..--.+..|++.||+++...|+.+|...-..
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gd 38 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGN 38 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCC
Confidence 333444455677899999999999999999876543
No 74
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=34.86 E-value=1.8e+02 Score=24.85 Aligned_cols=78 Identities=15% Similarity=0.058 Sum_probs=40.3
Q ss_pred CeEEecCCCccEEEEEEEEecCCCceeEEEEE---eCCCceEEEEecCEEEEcCCCe-EEEEEEEEEecCC-CCceEEEE
Q 004205 667 PSITVPNLKGNFSVTRSVTNVGKPRSIYKAVV---SSPVGVTVTVAPERLIFNSYGQ-KINFTVHFKLTSP-PKGYGFGY 741 (768)
Q Consensus 667 ps~~~~~~~~~~t~~~tv~N~~~~~~ty~~~~---~~~~g~~v~~~p~~~~~~~~~~-~~~~~vt~~~~~~-~~~~~~G~ 741 (768)
+++.+.+-.+..+++++.+.-.....+..... .+.+|........+|+| ++|| +++|+|.+.-+.. ..... =+
T Consensus 10 ~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F-~~Get~k~i~V~I~dD~~~E~~E~-F~ 87 (114)
T 3e9t_A 10 GHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSF-PPGVDEQRFRIEVIDDDVFEEDEC-FY 87 (114)
T ss_dssp SEEEEETTCCEEEEEEEEEECCSSCEEEEEEEECSSSCBTTTBCCCEEEEEE-CTTCCEEEEEEEBCCCSSCCCCEE-EE
T ss_pred CEEEEEcCCeEEEEEEEEECCCCeeEEEEEEeECCccCCCCCceEcceEEEE-eCCcEEEEEEEEEEcCCCccCCEE-EE
Confidence 45667776676666666555433333333222 23345444444568899 5665 4666666643322 22222 23
Q ss_pred EEEEc
Q 004205 742 LSWKN 746 (768)
Q Consensus 742 i~~~~ 746 (768)
|.+.+
T Consensus 88 v~L~~ 92 (114)
T 3e9t_A 88 IRLFN 92 (114)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 56664
No 75
>2qvk_A CBD2, sodium/calcium exchanger 1; calcium binding domain, metal binding protein; 1.45A {Canis lupus familiaris} PDB: 2qvm_A 2fwu_A 2kls_A
Probab=28.74 E-value=77 Score=30.14 Aligned_cols=64 Identities=16% Similarity=0.063 Sum_probs=35.4
Q ss_pred CeEEecCCCccEEEEEEEEecCCCceeEEEEE---eCCC-ceEEEEecCEEEEcCCCeE-EEEEEEEEec
Q 004205 667 PSITVPNLKGNFSVTRSVTNVGKPRSIYKAVV---SSPV-GVTVTVAPERLIFNSYGQK-INFTVHFKLT 731 (768)
Q Consensus 667 ps~~~~~~~~~~t~~~tv~N~~~~~~ty~~~~---~~~~-g~~v~~~p~~~~~~~~~~~-~~~~vt~~~~ 731 (768)
+++.+.+-.+..+++++.++-.....+..... .+.+ |........+|+| ++||+ ++|+|.+--+
T Consensus 13 ~~y~V~E~~G~v~vtV~R~gg~~g~VsV~y~T~dGTA~agG~DY~~~sGtL~F-~~GEt~KtI~I~IidD 81 (192)
T 2qvk_A 13 PVTHVSESIGIMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEF-QNDEIVKTISVKVIDD 81 (192)
T ss_dssp SEEEEETTCCEEEEEEEEESCCCSCEEEEEEEEESSSCTTTTSBCCCEEEEEE-CTTCCEEEEEEEBCCC
T ss_pred CeEEEEcCceEEEEEEEEeCCCCceEEEEEEeeCCceeccCcCccccceEEEE-CCCCeEEEEEEEEeCC
Confidence 45666666666665555554444333322222 2344 4555555667889 56765 6777666533
No 76
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=28.55 E-value=1.2e+02 Score=26.56 Aligned_cols=51 Identities=20% Similarity=0.284 Sum_probs=29.1
Q ss_pred ccEEEEEEEEecCCCcee----EEEE-E--------eCCCceEEEEe-cCEEEEcCCCeEEEEEEE
Q 004205 676 GNFSVTRSVTNVGKPRSI----YKAV-V--------SSPVGVTVTVA-PERLIFNSYGQKINFTVH 727 (768)
Q Consensus 676 ~~~t~~~tv~N~~~~~~t----y~~~-~--------~~~~g~~v~~~-p~~~~~~~~~~~~~~~vt 727 (768)
+..+++++|+|.|+.+.. |.+- + ....|..+.+- -+.+.| ++|+++++++.
T Consensus 24 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF-EPG~~k~V~LV 88 (126)
T 4ubp_B 24 GREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARF-EPGEEMEVELT 88 (126)
T ss_dssp TSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEE-CTTCEEEEEEE
T ss_pred CCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEee-CCCCeEEEEEE
Confidence 556778999999997632 1110 0 01123333331 134566 78999887664
No 77
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=28.55 E-value=1.2e+02 Score=26.56 Aligned_cols=51 Identities=20% Similarity=0.284 Sum_probs=29.1
Q ss_pred ccEEEEEEEEecCCCcee----EEEE-E--------eCCCceEEEEe-cCEEEEcCCCeEEEEEEE
Q 004205 676 GNFSVTRSVTNVGKPRSI----YKAV-V--------SSPVGVTVTVA-PERLIFNSYGQKINFTVH 727 (768)
Q Consensus 676 ~~~t~~~tv~N~~~~~~t----y~~~-~--------~~~~g~~v~~~-p~~~~~~~~~~~~~~~vt 727 (768)
+..+++++|+|.|+.+.. |.+- + ....|..+.+- -+.+.| ++|+++++++.
T Consensus 24 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF-EPG~~k~V~LV 88 (126)
T 4ac7_B 24 GREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARF-EPGEEMEVELT 88 (126)
T ss_dssp TSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEE-CTTCEEEEEEE
T ss_pred CCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEee-CCCCeEEEEEE
Confidence 556778999999997632 1110 0 01123333331 134566 78999887664
No 78
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=28.24 E-value=43 Score=30.75 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=27.3
Q ss_pred EeccccchhHHHHHHHHHHHHhCCCCCHHHHHHH
Q 004205 544 ILSGTSMACPHVTGIATLIKAVHPSWSPSAIKSA 577 (768)
Q Consensus 544 ~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~ 577 (768)
.+.|-| =|+.|-|++||+++.+-..+|+||.+.
T Consensus 78 ~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 78 HFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 344555 479999999999999999999998654
No 79
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=25.95 E-value=3e+02 Score=23.17 Aligned_cols=65 Identities=15% Similarity=0.095 Sum_probs=41.7
Q ss_pred eEEecCCCccEEEEEEEEecCCCceeEEEEEeCCCceEEEEecCEEEEc-CCCeEEEEEEEEEecCCCCceEEEEEEE
Q 004205 668 SITVPNLKGNFSVTRSVTNVGKPRSIYKAVVSSPVGVTVTVAPERLIFN-SYGQKINFTVHFKLTSPPKGYGFGYLSW 744 (768)
Q Consensus 668 s~~~~~~~~~~t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~p~~~~~~-~~~~~~~~~vt~~~~~~~~~~~~G~i~~ 744 (768)
.+.+........+++||+|-......|.-....|. .+++. ...++-+++|.+.. ...++.|..+.
T Consensus 35 vlsV~F~~~~~~vTItItNe~TG~~VYs~~~s~p~---------~i~IdLnge~sG~Y~IeI~~---~~~~LtG~F~i 100 (101)
T 3sd2_A 35 ILNVSFGRAKDYAIITVTNKATGEIVHSKTYHNTS---------IVMIDMSSCEKGEYTIHIIL---NDCLLEGTFTV 100 (101)
T ss_dssp EEEEEESSCCSCEEEEEEETTTCCEEEEEEESSCS---------EEEEECTTSCSEEEEEEEEE---TTEEEEEEEEE
T ss_pred EEEEEeccCCCcEEEEEEECCCCcEEEEEeccCCc---------EEEEEcCCCcCceEEEEEEe---CCcEEEEEEEe
Confidence 34454445556777999999877888887765533 33332 23356777777764 55778887653
No 80
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=24.03 E-value=42 Score=30.32 Aligned_cols=33 Identities=18% Similarity=0.213 Sum_probs=27.9
Q ss_pred EEeccccchhHHHHHHHHHHHHhCCCCCHHHHHH
Q 004205 543 NILSGTSMACPHVTGIATLIKAVHPSWSPSAIKS 576 (768)
Q Consensus 543 ~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~ 576 (768)
..+.|.| =|+.|-|++||+++.+-..+|+||.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4556666 47999999999999999999999864
No 81
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=23.30 E-value=3.4e+02 Score=22.93 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=25.2
Q ss_pred CccEEEEEEEEecCCCce-eEEEEEeCCCceEEE
Q 004205 675 KGNFSVTRSVTNVGKPRS-IYKAVVSSPVGVTVT 707 (768)
Q Consensus 675 ~~~~t~~~tv~N~~~~~~-ty~~~~~~~~g~~v~ 707 (768)
.+-++.+++|+|.+.... .+++++..|.|.+|+
T Consensus 14 ~~Gf~~~vtVtN~g~~~i~gWtv~~~~p~g~~it 47 (107)
T 3ndz_E 14 GSGASVNVTIKNNGTTPINGWTLKWTMPINQTIT 47 (107)
T ss_dssp SSEEEEEEEEEECSSSCEESCEEEEECCTTEEEE
T ss_pred CCCEEEEEEEEeCCCCcccCcEEEEEcCCCCEEe
Confidence 455788899999997654 499998888776553
No 82
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=23.03 E-value=2.6e+02 Score=24.64 Aligned_cols=62 Identities=16% Similarity=0.095 Sum_probs=32.0
Q ss_pred CeEEecCCCccEEEEEEEEecCCCceeEEEEE---eCCCceEEEEecCEEEEcCCCe-EEEEEEEEE
Q 004205 667 PSITVPNLKGNFSVTRSVTNVGKPRSIYKAVV---SSPVGVTVTVAPERLIFNSYGQ-KINFTVHFK 729 (768)
Q Consensus 667 ps~~~~~~~~~~t~~~tv~N~~~~~~ty~~~~---~~~~g~~v~~~p~~~~~~~~~~-~~~~~vt~~ 729 (768)
+++.+.+-.+..+++++.+.-.....+..... .+.+|........+|+| ++|| +++|+|.+.
T Consensus 12 ~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F-~~Get~k~i~V~I~ 77 (137)
T 3ead_A 12 GHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSF-PPGVDEQRFRIEVI 77 (137)
T ss_dssp CEEEEEGGGCEEEEEEEEESCCSSCEEEEEEEECSSSCBTTTBCCCEEEEEE-CTTCCEEEEEEEBC
T ss_pred CEEEEECCCeEEEEEEEEECCCCceEEEEEEeECCCcCCCCcEeEeeEEEEE-CCCceEEEEEEEEe
Confidence 45666665666665555554333333322222 22334444444567889 4565 466666654
No 83
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=22.30 E-value=2e+02 Score=24.60 Aligned_cols=52 Identities=17% Similarity=0.122 Sum_probs=38.0
Q ss_pred CCccEEEEEEEEecCCCc--eeEEEEEeCCCceEEEEe--c-CEEEEcCCCeEEEEEE
Q 004205 674 LKGNFSVTRSVTNVGKPR--SIYKAVVSSPVGVTVTVA--P-ERLIFNSYGQKINFTV 726 (768)
Q Consensus 674 ~~~~~t~~~tv~N~~~~~--~ty~~~~~~~~g~~v~~~--p-~~~~~~~~~~~~~~~v 726 (768)
-.+-.+.+.+|.|..+.. ..|++.+-...|+.+.=. | ..+++ .++|+++|+-
T Consensus 36 ~~g~l~~~~~l~N~~~~~~~l~Yrf~WyD~~Gl~v~~~~~~W~~l~l-~~~~~~~l~~ 92 (112)
T 3o0l_A 36 EAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGVSWKSLKL-HGKQQMQVTA 92 (112)
T ss_dssp GGGCEEEEEEEEECSSSCEEEEEEEEEECTTSCBCCCTTCCCEEEEE-CTTCEEEEEE
T ss_pred cCCeEEEEEEEEeCCCCCEEEEEEEEEECCCCCCcCCCCCCcEEEEE-CCCCeEEEEE
Confidence 346678889999999876 569999988899887732 4 56777 5667665443
No 84
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=21.26 E-value=2.6e+02 Score=27.54 Aligned_cols=65 Identities=8% Similarity=-0.002 Sum_probs=41.2
Q ss_pred CCCCCeEEecCCCccEEEEEEEEecCCCceeEEEEEeCCCceEEEEe-----cCEEEEcCCCeEEEEEEEEEe
Q 004205 663 DLNYPSITVPNLKGNFSVTRSVTNVGKPRSIYKAVVSSPVGVTVTVA-----PERLIFNSYGQKINFTVHFKL 730 (768)
Q Consensus 663 ~ln~ps~~~~~~~~~~t~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~-----p~~~~~~~~~~~~~~~vt~~~ 730 (768)
++|+|.+... .....+..+|.|..+.....++.+....++..... ...+++ ++++++++.+.+.+
T Consensus 85 ~~~LP~sv~r--GE~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v-~a~~~~~v~f~i~p 154 (252)
T 3hrz_B 85 DLQMPYSVVK--NEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPI-KALSSRAVPFVIVP 154 (252)
T ss_dssp EECCCSCEET--TCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEE-CTTEEEEEEEEEEE
T ss_pred EcCCCcEEee--CCEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEE-CCCCeEEEEEEEEe
Confidence 4566755442 34678889999999888888887766554433211 123455 56677777766665
Done!