Query 004208
Match_columns 768
No_of_seqs 431 out of 3259
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 17:42:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004208.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004208hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.8E-33 6.1E-38 294.8 27.0 245 24-309 6-273 (284)
2 2r83_A Synaptotagmin-1; C2A-C2 100.0 5.9E-32 2E-36 283.3 29.4 230 200-471 19-273 (284)
3 1dqv_A Synaptotagmin III; beta 100.0 6.7E-33 2.3E-37 291.6 20.0 246 24-309 7-276 (296)
4 1dqv_A Synaptotagmin III; beta 100.0 1E-31 3.4E-36 282.7 19.1 230 200-471 20-276 (296)
5 2ep6_A MCTP2 protein; beta san 99.8 2.3E-20 8E-25 171.2 13.1 124 32-163 6-131 (133)
6 2ep6_A MCTP2 protein; beta san 99.8 5.3E-20 1.8E-24 168.9 12.5 123 357-489 9-131 (133)
7 2dmh_A Myoferlin; beta-sandwic 99.8 2.1E-19 7.1E-24 166.5 15.6 123 37-165 5-134 (140)
8 2fk9_A Protein kinase C, ETA t 99.8 1.8E-19 6.1E-24 168.2 13.2 119 358-489 26-156 (157)
9 3b7y_A E3 ubiquitin-protein li 99.8 6.6E-19 2.3E-23 165.8 17.2 127 36-163 17-152 (153)
10 3kwu_A MUNC13-1; calcium bindi 99.8 7.5E-19 2.6E-23 164.4 17.3 125 359-489 15-146 (148)
11 1wfj_A Putative elicitor-respo 99.8 3.1E-19 1.1E-23 164.5 14.4 123 358-491 7-131 (136)
12 2dmh_A Myoferlin; beta-sandwic 99.8 7.6E-19 2.6E-23 162.7 16.6 125 358-490 4-133 (140)
13 3kwu_A MUNC13-1; calcium bindi 99.8 1E-18 3.5E-23 163.5 16.3 119 37-163 15-146 (148)
14 3m7f_B E3 ubiquitin-protein li 99.8 1.3E-18 4.4E-23 167.8 17.1 128 37-165 6-142 (176)
15 1wfj_A Putative elicitor-respo 99.8 1.5E-19 5.1E-24 166.6 9.9 124 36-166 7-132 (136)
16 3b7y_A E3 ubiquitin-protein li 99.8 1.6E-18 5.4E-23 163.2 15.0 124 358-489 17-152 (153)
17 2fk9_A Protein kinase C, ETA t 99.8 1.5E-18 5.1E-23 161.9 12.9 121 197-333 26-157 (157)
18 3m7f_B E3 ubiquitin-protein li 99.8 4.5E-18 1.5E-22 164.0 15.3 125 358-490 5-141 (176)
19 1rlw_A Phospholipase A2, CALB 99.8 1.6E-18 5.6E-23 157.3 11.3 115 38-161 2-122 (126)
20 1gmi_A Protein kinase C, epsil 99.8 1.7E-18 5.9E-23 159.3 11.0 116 38-164 5-133 (136)
21 2z0u_A WW domain-containing pr 99.8 9.5E-19 3.3E-23 164.2 9.3 115 25-145 31-154 (155)
22 2b3r_A Phosphatidylinositol-4- 99.8 3.4E-18 1.1E-22 156.8 12.7 113 27-147 10-131 (134)
23 1rlw_A Phospholipase A2, CALB 99.8 4.2E-18 1.4E-22 154.6 12.7 117 360-487 2-122 (126)
24 2bwq_A Regulating synaptic mem 99.8 2.6E-18 8.8E-23 156.7 11.2 114 24-145 5-129 (129)
25 1gmi_A Protein kinase C, epsil 99.8 4.6E-18 1.6E-22 156.5 12.5 120 359-491 4-134 (136)
26 2nq3_A Itchy homolog E3 ubiqui 99.8 3E-18 1E-22 163.8 11.5 127 37-165 34-162 (173)
27 2d8k_A Synaptotagmin VII; exoc 99.7 4E-18 1.4E-22 158.0 11.7 118 25-149 14-138 (141)
28 3pyc_A E3 ubiquitin-protein li 99.7 1.4E-17 4.7E-22 152.5 14.4 119 38-162 4-131 (132)
29 1rh8_A Piccolo protein; beta-s 99.7 1.1E-18 3.9E-23 162.0 7.1 115 25-148 8-140 (142)
30 1v27_A Regulating synaptic mem 99.7 1.7E-18 5.9E-23 160.5 8.3 120 24-151 8-138 (141)
31 1rsy_A Synaptotagmin I; calciu 99.7 5.7E-18 1.9E-22 159.1 11.9 116 25-147 30-151 (152)
32 3f04_A Synaptotagmin-1; C2A, c 99.7 5.1E-18 1.7E-22 157.7 10.7 115 25-146 22-142 (143)
33 3pyc_A E3 ubiquitin-protein li 99.7 2.9E-17 9.9E-22 150.3 14.2 124 360-488 4-131 (132)
34 1wfm_A Synaptotagmin XIII; C2 99.7 2.1E-17 7.3E-22 152.3 12.9 116 24-149 13-135 (138)
35 2d8k_A Synaptotagmin VII; exoc 99.7 6.6E-17 2.3E-21 149.7 16.0 120 321-472 11-137 (141)
36 1ugk_A Synaptotagmin IV, KIAA1 99.7 2.4E-17 8.1E-22 152.2 12.6 118 25-148 10-135 (138)
37 1rsy_A Synaptotagmin I; calciu 99.7 2.7E-17 9.1E-22 154.5 12.8 105 359-470 40-150 (152)
38 3fbk_A RGS3, RGP3, regulator o 99.7 1.8E-17 6.1E-22 155.8 10.7 118 24-149 14-140 (153)
39 2chd_A Rabphilin-3A, exophilin 99.7 1.5E-17 5.2E-22 154.3 10.0 116 25-147 17-141 (142)
40 2nq3_A Itchy homolog E3 ubiqui 99.7 4.6E-17 1.6E-21 155.5 13.4 123 358-489 33-160 (173)
41 2dmg_A KIAA1228 protein; beta- 99.7 2.1E-17 7.1E-22 153.4 10.5 117 25-149 12-138 (142)
42 3fdw_A Synaptotagmin-like prot 99.7 1.3E-17 4.6E-22 155.8 9.3 122 320-472 7-136 (148)
43 2z0u_A WW domain-containing pr 99.7 2.3E-17 7.8E-22 154.8 10.5 105 200-308 43-155 (155)
44 3fdw_A Synaptotagmin-like prot 99.7 8.6E-18 2.9E-22 157.1 7.6 119 24-149 10-137 (148)
45 2b3r_A Phosphatidylinositol-4- 99.7 6.1E-17 2.1E-21 148.3 12.7 105 359-471 18-131 (134)
46 3rdl_A Protein kinase C alpha 99.7 1.8E-17 6.3E-22 152.8 9.2 114 25-148 6-126 (137)
47 2q3x_A Regulating synaptic mem 99.7 2.3E-17 8E-22 157.9 10.2 114 25-148 20-141 (171)
48 2dmg_A KIAA1228 protein; beta- 99.7 5.5E-17 1.9E-21 150.5 11.9 121 320-471 8-136 (142)
49 1a25_A CALB, protein kinase C 99.7 3.3E-17 1.1E-21 153.3 10.5 114 25-148 21-141 (149)
50 3f04_A Synaptotagmin-1; C2A, c 99.7 4.5E-17 1.5E-21 151.3 11.2 104 359-469 32-141 (143)
51 1v27_A Regulating synaptic mem 99.7 7.7E-17 2.6E-21 149.4 12.5 107 360-472 20-135 (141)
52 2bwq_A Regulating synaptic mem 99.7 9.3E-17 3.2E-21 146.3 12.6 102 200-307 18-129 (129)
53 3fbk_A RGS3, RGP3, regulator o 99.7 6.1E-17 2.1E-21 152.1 11.4 107 358-472 24-139 (153)
54 2cm5_A Rabphilin-3A; protein t 99.7 1.6E-16 5.5E-21 151.5 13.7 101 25-127 25-133 (166)
55 2enp_A B/K protein; C2 type 1, 99.7 5.5E-17 1.9E-21 151.5 9.9 118 24-148 13-143 (147)
56 3n5a_A Synaptotagmin-7; calciu 99.7 1.2E-16 4.2E-21 147.4 12.1 102 25-128 4-113 (138)
57 1tjx_A Similar to synaptotagmi 99.7 1.8E-16 6.1E-21 150.0 13.4 120 25-147 13-148 (159)
58 1wfm_A Synaptotagmin XIII; C2 99.7 3E-16 1E-20 144.6 13.8 117 320-471 10-133 (138)
59 1rh8_A Piccolo protein; beta-s 99.7 6.9E-17 2.4E-21 149.8 9.1 104 361-471 18-139 (142)
60 3rdl_A Protein kinase C alpha 99.7 2.8E-16 9.7E-21 144.7 13.1 103 361-471 16-125 (137)
61 1tjx_A Similar to synaptotagmi 99.7 3.8E-16 1.3E-20 147.8 14.1 120 320-471 9-148 (159)
62 1ugk_A Synaptotagmin IV, KIAA1 99.7 6.2E-16 2.1E-20 142.6 15.1 107 200-310 22-135 (138)
63 1w15_A Synaptotagmin IV; metal 99.7 2.1E-16 7.1E-21 148.6 11.8 101 24-126 17-125 (153)
64 3n5a_A Synaptotagmin-7; calciu 99.7 3.3E-16 1.1E-20 144.5 12.7 102 359-469 14-123 (138)
65 2chd_A Rabphilin-3A, exophilin 99.7 2.3E-16 8E-21 146.2 11.7 105 359-470 27-140 (142)
66 2enp_A B/K protein; C2 type 1, 99.7 3E-16 1E-20 146.4 12.3 123 320-471 10-142 (147)
67 2q3x_A Regulating synaptic mem 99.7 1.9E-16 6.6E-21 151.5 10.2 104 361-471 30-140 (171)
68 1a25_A CALB, protein kinase C 99.7 3.3E-16 1.1E-20 146.4 11.6 103 361-471 31-140 (149)
69 2cjt_A UNC-13 homolog A, MUNC1 99.7 2.9E-16 9.8E-21 142.8 10.2 87 37-130 3-91 (131)
70 2cm5_A Rabphilin-3A; protein t 99.6 1.1E-15 3.9E-20 145.6 13.7 109 200-309 37-160 (166)
71 1w15_A Synaptotagmin IV; metal 99.6 1.7E-15 5.7E-20 142.3 13.9 89 200-289 30-125 (153)
72 2cjt_A UNC-13 homolog A, MUNC1 99.6 3.2E-15 1.1E-19 135.8 12.5 117 359-488 3-130 (131)
73 2cjs_A UNC-13 homolog A, MUNC1 99.6 4.9E-15 1.7E-19 140.2 13.3 120 359-491 12-142 (167)
74 2cjs_A UNC-13 homolog A, MUNC1 99.6 2.8E-15 9.6E-20 141.9 11.4 119 38-163 13-140 (167)
75 3l9b_A Otoferlin; C2-domain, b 99.6 5.9E-15 2E-19 131.3 10.6 116 40-165 22-141 (144)
76 3nsj_A Perforin-1; pore formin 99.6 7.7E-15 2.6E-19 163.6 14.1 110 37-163 392-503 (540)
77 3jzy_A Intersectin 2; C2 domai 99.6 6.3E-15 2.1E-19 167.1 11.3 121 37-162 385-506 (510)
78 3nsj_A Perforin-1; pore formin 99.5 4.8E-14 1.6E-18 157.2 16.7 113 358-491 391-505 (540)
79 3jzy_A Intersectin 2; C2 domai 99.5 2.2E-14 7.6E-19 162.5 13.8 119 358-489 384-507 (510)
80 3l9b_A Otoferlin; C2-domain, b 99.5 8.4E-14 2.9E-18 124.0 12.6 116 362-491 22-141 (144)
81 1djx_A PLC-D1, phosphoinositid 99.5 1.1E-13 3.8E-18 158.0 15.4 119 37-163 495-623 (624)
82 1cjy_A CPLA2, protein (cytosol 99.5 1.2E-13 4E-18 158.6 10.8 106 37-147 16-127 (749)
83 1djx_A PLC-D1, phosphoinositid 99.4 8.3E-13 2.8E-17 150.7 15.1 122 359-489 495-623 (624)
84 3bxj_A RAS GTPase-activating p 99.4 1.7E-14 5.7E-19 160.8 0.4 121 359-491 9-158 (483)
85 1cjy_A CPLA2, protein (cytosol 99.3 1.8E-12 6.2E-17 148.8 10.2 107 197-309 15-127 (749)
86 3bxj_A RAS GTPase-activating p 99.3 2.8E-13 9.6E-18 150.9 -0.7 100 38-148 10-118 (483)
87 3ohm_B 1-phosphatidylinositol- 99.2 9.3E-11 3.2E-15 136.8 13.0 111 39-164 725-845 (885)
88 3qr0_A Phospholipase C-beta (P 99.2 1.5E-10 5.2E-15 134.4 14.4 112 38-164 649-771 (816)
89 3pfq_A PKC-B, PKC-beta, protei 99.1 5.6E-11 1.9E-15 138.6 9.1 105 38-148 171-282 (674)
90 2zkm_X 1-phosphatidylinositol- 99.1 2.5E-10 8.6E-15 133.4 12.8 110 38-162 677-797 (799)
91 3pfq_A PKC-B, PKC-beta, protei 99.1 1.8E-10 6.3E-15 134.3 9.5 104 360-471 171-281 (674)
92 3qr0_A Phospholipase C-beta (P 99.0 1.2E-09 4.1E-14 126.9 14.6 110 360-489 649-770 (816)
93 3ohm_B 1-phosphatidylinositol- 99.0 1.1E-09 3.7E-14 127.9 13.3 110 361-489 725-844 (885)
94 2zkm_X 1-phosphatidylinositol- 99.0 1.7E-09 5.8E-14 126.4 13.9 111 359-488 676-797 (799)
95 1yrk_A NPKC-delta, protein kin 98.9 6.4E-09 2.2E-13 89.6 9.1 114 39-163 6-124 (126)
96 2enj_A NPKC-theta, protein kin 98.8 5.7E-09 2E-13 91.1 7.5 114 39-163 10-129 (138)
97 1yrk_A NPKC-delta, protein kin 98.7 2.6E-07 9E-12 79.7 12.3 112 201-331 7-123 (126)
98 2enj_A NPKC-theta, protein kin 98.5 4E-07 1.4E-11 79.5 10.0 111 201-331 11-128 (138)
99 2yrb_A Protein fantom; beta sa 92.2 0.52 1.8E-05 42.5 8.5 126 33-164 12-150 (156)
100 3hhm_A Phosphatidylinositol-4, 87.6 3 0.0001 49.7 12.1 92 361-457 355-456 (1091)
101 2yrb_A Protein fantom; beta sa 85.9 3.3 0.00011 37.3 8.7 124 358-490 15-150 (156)
102 3l4c_A Dedicator of cytokinesi 84.7 7.8 0.00027 37.0 11.3 40 72-111 78-119 (220)
103 2wxf_A Phosphatidylinositol-4, 84.5 5.2 0.00018 47.2 12.1 91 361-457 217-325 (940)
104 2wxf_A Phosphatidylinositol-4, 81.1 6 0.00021 46.7 10.9 86 201-290 218-324 (940)
105 3hhm_A Phosphatidylinositol-4, 79.4 12 0.00042 44.6 12.6 102 39-162 355-470 (1091)
106 1e7u_A Phosphatidylinositol 3- 71.0 19 0.00064 42.6 11.3 92 362-457 219-331 (961)
107 2y3a_A Phosphatidylinositol-4, 68.2 5.7 0.00019 47.6 6.2 91 361-457 353-471 (1092)
108 1e7u_A Phosphatidylinositol 3- 66.7 19 0.00065 42.6 10.1 70 201-272 219-296 (961)
109 3l4c_A Dedicator of cytokinesi 62.3 23 0.0008 33.7 8.0 59 396-454 77-138 (220)
110 2y3a_A Phosphatidylinositol-4, 56.7 11 0.00037 45.2 5.7 73 32-110 349-430 (1092)
111 3hd7_A Vesicle-associated memb 41.9 65 0.0022 25.9 6.5 39 672-710 34-72 (91)
112 1gk7_A Vimentin; intermediate 25.1 58 0.002 21.6 2.8 19 682-700 7-25 (39)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=1.8e-33 Score=294.84 Aligned_cols=245 Identities=25% Similarity=0.377 Sum_probs=205.3
Q ss_pred CCCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC---eeeEeeeecCCCCCeeeeEEEEEec--cCC
Q 004208 24 GRERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN---YKGTTIPFEKKLNPEWNQVFAFTKE--RLQ 98 (768)
Q Consensus 24 ~~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~---~~~~T~~~~~t~nP~Wne~f~f~~~--~~~ 98 (768)
|...+++.|+. ..+.|.|+|++|++|+.+|..|.+||||++++++ ++.+|+++++|.||+|||+|.|.+. ++.
T Consensus 6 G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~ 83 (284)
T 2r83_A 6 GKLQYSLDYDF--QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELA 83 (284)
T ss_dssp CEEEEEEEEET--TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCT
T ss_pred eEEEEEEEEEC--CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhC
Confidence 35678888986 4689999999999999999999999999999974 4789999999999999999999975 345
Q ss_pred CceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCC--CccceEEEEEEEEcccCCcccccccc
Q 004208 99 AISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDG--SRARGELMFAIWFGTQADEAFSSAWH 175 (768)
Q Consensus 99 ~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~--~~~~G~i~l~i~~~~~~d~~~~~~~~ 175 (768)
...|.|+|||++.+ +|++||++.++|.++..+. ....|++|.+..+ ....|+|.+++.+.+
T Consensus 84 ~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p----------- 147 (284)
T 2r83_A 84 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSAEKEEQEKLGDICFSLRYVP----------- 147 (284)
T ss_dssp TCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSS-----CEEEEEECBCCSSCCCCCCCEEEEEEEEET-----------
T ss_pred cCEEEEEEEECCCCCCCceeEEEEEcchhcccCC-----cceeEEEeeccccccccccccEEEEEEecC-----------
Confidence 68999999999998 8999999999999997653 3578999987643 236799998887642
Q ss_pred ccccccccccccccccceeecCCeeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---eEEeeecccCCCCCCcccc
Q 004208 176 SDTAVVSGENIMNCRSKVYVSPKLWYLRVNVIEAQDLVPKQRNRNPEVFIKAIFG--N---VVLKTTVSAKKTVNPTWNE 250 (768)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~p~~~~L~V~v~~a~~L~~~d~~~~~dpyV~v~lg--~---~~~~T~~i~~~t~nP~wne 250 (768)
..+.|.|.|++|++|+.+|..+.+||||++++. + .+.+|+++++ +.||+|||
T Consensus 148 ----------------------~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne 204 (284)
T 2r83_A 148 ----------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYNE 204 (284)
T ss_dssp ----------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEE
T ss_pred ----------------------cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecC-CCCCEEce
Confidence 234699999999999999999999999999993 2 4678999887 99999999
Q ss_pred eEEEEecCCC--CCcEEEEEEeccCCCCCceeEEEEEeccccccc--------cCCCCCCceeEEcccC
Q 004208 251 DLMFVAAEPF--DDPLILTVEDKLGDNKEECLGRLVLPLSKAGKR--------FLPLPAAAIWYNLERN 309 (768)
Q Consensus 251 ~f~f~~~~~~--~~~L~i~V~d~d~~~~d~~lG~~~i~l~~l~~~--------~~~~~~~~~w~~L~~~ 309 (768)
+|.|.+.... ...|.|+|||+|..+++++||++.++++.+... ..++....+||+|.+.
T Consensus 205 ~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 205 SFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred eEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 9999986542 346999999999999999999999999864321 1244567899999876
No 2
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=5.9e-32 Score=283.27 Aligned_cols=230 Identities=23% Similarity=0.336 Sum_probs=190.3
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeEEeeecccCCCCCCcccceEEEEecCC--CCCcEEEEEEeccCC
Q 004208 200 WYLRVNVIEAQDLVPKQRNRNPEVFIKAIFG---NVVLKTTVSAKKTVNPTWNEDLMFVAAEP--FDDPLILTVEDKLGD 274 (768)
Q Consensus 200 ~~L~V~v~~a~~L~~~d~~~~~dpyV~v~lg---~~~~~T~~i~~~t~nP~wne~f~f~~~~~--~~~~L~i~V~d~d~~ 274 (768)
+.|+|+|++|++|+.+|..+.+||||+++++ ++.++|+++++ ++||.|||+|.|.+... ....|.|+|||+|..
T Consensus 19 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~-~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~ 97 (284)
T 2r83_A 19 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRF 97 (284)
T ss_dssp TEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCS-CSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccC-CCCCeeCceEEEEechHHhCcCEEEEEEEECCCC
Confidence 4699999999999999999999999999994 35789999997 99999999999997643 457899999999998
Q ss_pred CCCceeEEEEEeccccccccCCCCCCceeEEcccCccCccccccccccceEEEEEecCCCcccccCcccccCcccccccc
Q 004208 275 NKEECLGRLVLPLSKAGKRFLPLPAAAIWYNLERNIANGEEKKDVRFASRICLRFSLDGGYHVFDEATNYSSDLRSTMKQ 354 (768)
Q Consensus 275 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~~~~~~g~~~~~~~~~g~i~l~v~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (768)
+++++||++.++|.++.. +.....|++|...... .....|.+++.+...
T Consensus 98 ~~~~~lG~~~i~l~~l~~----~~~~~~w~~L~~~~~~-----~~~~~G~i~l~l~~~---------------------- 146 (284)
T 2r83_A 98 SKHDIIGEFKVPMNTVDF----GHVTEEWRDLQSAEKE-----EQEKLGDICFSLRYV---------------------- 146 (284)
T ss_dssp SCCCEEEEEEEEGGGCCC----SSCEEEEEECBCCSSC-----CCCCCCEEEEEEEEE----------------------
T ss_pred CCCceeEEEEEcchhccc----CCcceeEEEeeccccc-----cccccccEEEEEEec----------------------
Confidence 899999999999999863 3456889999875321 113457887766531
Q ss_pred CCCCeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC-----eeeeeccccCCCCCccccEEEEEEeCC---CcEE
Q 004208 355 LWPPVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN-----KWVRTRTVVDSFDPKWNEQYTWEVYDP---YTVI 426 (768)
Q Consensus 355 l~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~-----~~~~T~~~~~t~nP~wne~~~~~v~~~---~~~l 426 (768)
+..|.|.|.|++|+||+.+ +..|.+||||++++++ ..++|+++++++||.|||.|.|.+..+ ...|
T Consensus 147 ---p~~~~l~v~v~~a~~L~~~---d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l 220 (284)
T 2r83_A 147 ---PTAGKLTVVILEAKNLKKM---DVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQV 220 (284)
T ss_dssp ---TTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEE
T ss_pred ---CcCCceEEEEEEeECCCCc---CCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEE
Confidence 2345799999999999985 6778999999999842 458999999999999999999999754 3479
Q ss_pred EEEEEeCCCCCCCCCCCCceEEEEEeccccc------------cCceeeeeEeeeec
Q 004208 427 TLVVFDNCHLHPGGAKDSRIGKVRIRLSTLE------------TDRIYTHSYPLVAL 471 (768)
Q Consensus 427 ~v~v~d~~~~~~~~~~d~~lG~~~i~l~~l~------------~~~~~~~~~~L~~~ 471 (768)
.|+|||++.++ +|++||++.|+++.+. +++...+||+|...
T Consensus 221 ~i~V~d~d~~~----~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 221 VVTVLDYDKIG----KNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EEEEEECCSSS----CCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred EEEEEeCCCCC----CCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 99999999865 8999999999998632 24567899999754
No 3
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=6.7e-33 Score=291.63 Aligned_cols=246 Identities=26% Similarity=0.361 Sum_probs=201.4
Q ss_pred CCCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeeeEeeeecCCCCCeeeeEEEEEec--cCC
Q 004208 24 GRERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKI---GNYKGTTIPFEKKLNPEWNQVFAFTKE--RLQ 98 (768)
Q Consensus 24 ~~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~---~~~~~~T~~~~~t~nP~Wne~f~f~~~--~~~ 98 (768)
|...+++.|+. ..+.|.|+|++|++|+.+|..|.+||||++++ +.++++|+++++|.||+|||+|.|.+. ++.
T Consensus 7 G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 84 (296)
T 1dqv_A 7 GRISFALRYLY--GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELA 84 (296)
T ss_dssp CEEEEEEECCS--SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGS
T ss_pred eEEEEEEEEeC--CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhc
Confidence 45678888886 46899999999999999999999999999999 457889999999999999999999974 444
Q ss_pred CceEEEEEEEcCCC-CCceeEEEEEc-CCCCCCCCCCCCCCCCeEEEcccCCCC-ccceEEEEEEEEcccCCcccccccc
Q 004208 99 AISVELLVKDKMIV-NGDFIGKIKID-MPDIPKRVPPDSPLAPEWKRLEAKDGS-RARGELMFAIWFGTQADEAFSSAWH 175 (768)
Q Consensus 99 ~~~L~i~V~d~~~~-~d~~lG~~~i~-l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~G~i~l~i~~~~~~d~~~~~~~~ 175 (768)
...|.|+|||+|.+ +|++||++.++ +.++.... .....|++|....+. ...|+|.+++.+.+
T Consensus 85 ~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~----~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~----------- 149 (296)
T 1dqv_A 85 QRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQP----PDRPLWRDILEGGSEKADLGELNFSLCYLP----------- 149 (296)
T ss_dssp SCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSC----SSCCCCEECBCCSSCCSCCCEEEEEEEEET-----------
T ss_pred CCEEEEEEEEcCCCCCCceEEEEEeccccccccCC----ccceeeeccccccccccccceEEEEEEecc-----------
Confidence 56899999999998 89999999996 44443211 124689999875432 35799999887742
Q ss_pred ccccccccccccccccceeecCCeeEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---eEEeeecccCCCCCCcccc
Q 004208 176 SDTAVVSGENIMNCRSKVYVSPKLWYLRVNVIEAQDLVPKQRNRNPEVFIKAIFG--N---VVLKTTVSAKKTVNPTWNE 250 (768)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~p~~~~L~V~v~~a~~L~~~d~~~~~dpyV~v~lg--~---~~~~T~~i~~~t~nP~wne 250 (768)
..+.|.|.|++|++|+.+|..|.+||||++++. + .+++|+++++ +.||.|||
T Consensus 150 ----------------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne 206 (296)
T 1dqv_A 150 ----------------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKN-TLNPTYNE 206 (296)
T ss_dssp ----------------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCS-CSSCEEEE
T ss_pred ----------------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecC-CCCCeECc
Confidence 235799999999999999999999999999995 2 5789999987 99999999
Q ss_pred eEEEEecCCC--CCcEEEEEEeccCCCCCceeEEEEEecccccc-c--------cCCCCCCceeEEcccC
Q 004208 251 DLMFVAAEPF--DDPLILTVEDKLGDNKEECLGRLVLPLSKAGK-R--------FLPLPAAAIWYNLERN 309 (768)
Q Consensus 251 ~f~f~~~~~~--~~~L~i~V~d~d~~~~d~~lG~~~i~l~~l~~-~--------~~~~~~~~~w~~L~~~ 309 (768)
.|.|.+.... ...|.|+|||++..+++++||++.++++.+.. . ..++....+|+.|...
T Consensus 207 ~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 207 ALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp CCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred eEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 9999886542 45799999999999999999999999987643 0 0134566778888765
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.97 E-value=1e-31 Score=282.67 Aligned_cols=230 Identities=23% Similarity=0.324 Sum_probs=187.1
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEEeeecccCCCCCCcccceEEEEecCC--CCCcEEEEEEeccCC
Q 004208 200 WYLRVNVIEAQDLVPKQRNRNPEVFIKAIF---GNVVLKTTVSAKKTVNPTWNEDLMFVAAEP--FDDPLILTVEDKLGD 274 (768)
Q Consensus 200 ~~L~V~v~~a~~L~~~d~~~~~dpyV~v~l---g~~~~~T~~i~~~t~nP~wne~f~f~~~~~--~~~~L~i~V~d~d~~ 274 (768)
+.|+|+|++|++|+.+|..+.+||||++++ +++.++|+++++ ++||.|||+|.|.+... ....|.|+|||+|..
T Consensus 20 ~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~ 98 (296)
T 1dqv_A 20 DQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRK-TLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRF 98 (296)
T ss_dssp CEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCS-CSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSS
T ss_pred CEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCC-CCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCC
Confidence 469999999999999999999999999999 568899999987 99999999999998543 345899999999999
Q ss_pred CCCceeEEEEEe-ccccccccCCCCCCceeEEcccCccCccccccccccceEEEEEecCCCcccccCcccccCccccccc
Q 004208 275 NKEECLGRLVLP-LSKAGKRFLPLPAAAIWYNLERNIANGEEKKDVRFASRICLRFSLDGGYHVFDEATNYSSDLRSTMK 353 (768)
Q Consensus 275 ~~d~~lG~~~i~-l~~l~~~~~~~~~~~~w~~L~~~~~~g~~~~~~~~~g~i~l~v~~~~~~~~~~~~~~~~~~~~~~~~ 353 (768)
+++++||++.++ +.++.. .......|++|...... ....|.|.+.+...
T Consensus 99 ~~~~~iG~~~i~~l~~~~~---~~~~~~~w~~L~~~~~~------~~~~G~i~vsl~y~--------------------- 148 (296)
T 1dqv_A 99 SRHDLIGQVVLDNLLELAE---QPPDRPLWRDILEGGSE------KADLGELNFSLCYL--------------------- 148 (296)
T ss_dssp SCCCEEEEEECCCTTGGGS---SCSSCCCCEECBCCSSC------CSCCCEEEEEEEEE---------------------
T ss_pred CCCceEEEEEecccccccc---CCccceeeecccccccc------ccccceEEEEEEec---------------------
Confidence 999999999996 444432 12346789999865321 13458888776531
Q ss_pred cCCCCeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEec--C---eeeeeccccCCCCCccccEEEEEEeCC---CcE
Q 004208 354 QLWPPVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYA--N---KWVRTRTVVDSFDPKWNEQYTWEVYDP---YTV 425 (768)
Q Consensus 354 ~l~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g--~---~~~~T~~~~~t~nP~wne~~~~~v~~~---~~~ 425 (768)
+..|.|+|.|++|+||+++ +..|.+||||+++++ + ..+||+++++++||.|||.|.|.+... ...
T Consensus 149 ----~~~~~l~v~v~~a~~L~~~---d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 221 (296)
T 1dqv_A 149 ----PTAGLLTVTIIKASNLKAM---DLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVG 221 (296)
T ss_dssp ----TTTTEEEEEEEEEESCCCC---SSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCC
T ss_pred ----cccceeEEEEEEeecCCcc---CCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcE
Confidence 2346899999999999986 677889999999995 3 468999999999999999999998754 347
Q ss_pred EEEEEEeCCCCCCCCCCCCceEEEEEecccccc-------------CceeeeeEeeeec
Q 004208 426 ITLVVFDNCHLHPGGAKDSRIGKVRIRLSTLET-------------DRIYTHSYPLVAL 471 (768)
Q Consensus 426 l~v~v~d~~~~~~~~~~d~~lG~~~i~l~~l~~-------------~~~~~~~~~L~~~ 471 (768)
|.|+|||++.++ +|++||.+.|+++.+.. +++..+|++|...
T Consensus 222 L~i~V~d~d~~~----~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 222 LSIAVVDYDCIG----HNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp CCCEEEECCSSS----CCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred EEEEEEeCCCCC----CCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 999999999865 89999999999997643 3455677777544
No 5
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=2.3e-20 Score=171.24 Aligned_cols=124 Identities=29% Similarity=0.442 Sum_probs=110.2
Q ss_pred ccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeEeeeecCCCCCeeeeEEEEEeccCCCceEEEEEEEcCC
Q 004208 32 FDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGNYKGTTIPFEKKLNPEWNQVFAFTKERLQAISVELLVKDKMI 111 (768)
Q Consensus 32 ~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~~~ 111 (768)
.+...+.+.|.|+|++|++|+..|..|.+||||++++++++.+|++++++.||+|||+|.|.+.+. ...|.|+|||++.
T Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~d~ 84 (133)
T 2ep6_A 6 SGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDEDG 84 (133)
T ss_dssp CCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEEET
T ss_pred ccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEECCC
Confidence 345567899999999999999999999999999999999999999999999999999999999875 5789999999999
Q ss_pred C-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCC-CccceEEEEEEEEc
Q 004208 112 V-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDG-SRARGELMFAIWFG 163 (768)
Q Consensus 112 ~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~-~~~~G~i~l~i~~~ 163 (768)
. +|++||++.+++.++..+ ..+|++|.+..+ ....|+|.+++.+.
T Consensus 85 ~~~~~~lG~~~i~l~~l~~~-------~~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 85 DKPPDFLGKVAIPLLSIRDG-------QPNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp TEEEEECCBCEEEGGGCCSS-------CCEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred CCCCCeeEEEEEEHHHccCC-------CceEEEeecCCCCCccceEEEEEEEEE
Confidence 8 899999999999998654 358999997654 24789999998764
No 6
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=5.3e-20 Score=168.86 Aligned_cols=123 Identities=26% Similarity=0.461 Sum_probs=109.4
Q ss_pred CCeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecCeeeeeccccCCCCCccccEEEEEEeCCCcEEEEEEEeCCCC
Q 004208 357 PPVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYANKWVRTRTVVDSFDPKWNEQYTWEVYDPYTVITLVVFDNCHL 436 (768)
Q Consensus 357 ~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~~~~~T~~~~~t~nP~wne~~~~~v~~~~~~l~v~v~d~~~~ 436 (768)
.+..|.|+|+|++|+||+++ +..|.+||||+++++++.+||+++++++||.|||.|.|.+.++...|.|+|||++.+
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAA---DFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGD 85 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCS---SSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETT
T ss_pred cCCceEEEEEEEeeECCCCC---CCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCC
Confidence 46789999999999999985 677899999999999999999999999999999999999998888999999999986
Q ss_pred CCCCCCCCceEEEEEeccccccCceeeeeEeeeecCCCCcccccEEEEEEEEE
Q 004208 437 HPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVALLPNGVKKMGEVQLAVRFT 489 (768)
Q Consensus 437 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 489 (768)
+ +|++||++.|+|.++..+. .+||+|......+ +..|+|+|+++|.
T Consensus 86 ~----~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 86 K----PPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLI 131 (133)
T ss_dssp E----EEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEE
T ss_pred C----CCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEE
Confidence 5 7999999999999998776 5899998665433 4569999999984
No 7
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2.1e-19 Score=166.53 Aligned_cols=123 Identities=21% Similarity=0.345 Sum_probs=107.7
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeEeeeecCCCCCeeeeEEEEEeccC---CCceEEEEEEEcCCC-
Q 004208 37 QMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGNYKGTTIPFEKKLNPEWNQVFAFTKERL---QAISVELLVKDKMIV- 112 (768)
Q Consensus 37 ~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~Wne~f~f~~~~~---~~~~L~i~V~d~~~~- 112 (768)
..+.|.|+|++|++|+..|. |.+||||++++++++++|++++++.||+|||+|.|.+... ....|.|+|||++.+
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~ 83 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIG 83 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSS
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCC
Confidence 35799999999999999998 9999999999999999999999999999999999998643 368999999999998
Q ss_pred CCceeEEEEEcCCCCCCCCCCCCCCCCeEEE---cccCCCCccceEEEEEEEEccc
Q 004208 113 NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKR---LEAKDGSRARGELMFAIWFGTQ 165 (768)
Q Consensus 113 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~---L~~~~~~~~~G~i~l~i~~~~~ 165 (768)
+|++||++.++|.++..+. ....|++ |.+..+....|+|.+++.|.+.
T Consensus 84 ~~~~lG~~~i~l~~l~~~~-----~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 84 QNKLIGTATVALKDLTGDQ-----SRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp SCCCCEEEEEEGGGTCSSS-----CEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred CCceEEEEEEEHHHhccCC-----CceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 8999999999999997653 2468987 7766665577999999999753
No 8
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.81 E-value=1.8e-19 Score=168.19 Aligned_cols=119 Identities=22% Similarity=0.267 Sum_probs=102.1
Q ss_pred CeeeEEEEEEEEecCCCCCCCC-------CCCCCcCcEEEEEecCee-eeeccccCCCCCccccEEEEEEeCCCcEEEEE
Q 004208 358 PVIGVLELGILSAKELLPMKSR-------DGRGTTDAYCVAKYANKW-VRTRTVVDSFDPKWNEQYTWEVYDPYTVITLV 429 (768)
Q Consensus 358 ~~~g~l~v~v~~a~~L~~~~~~-------~~~g~~dpyv~v~~g~~~-~~T~~~~~t~nP~wne~~~~~v~~~~~~l~v~ 429 (768)
...|.|+|+|++|+||+++|.. ...|.+||||+++++++. .||+++++|+||.|||.|.|.+.+ ...|.|+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~ 104 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELA 104 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEE
Confidence 5789999999999999986410 023679999999998866 799999999999999999999975 4589999
Q ss_pred EEeCCCCCCCCCCCCceEEEEEeccccccC----ceeeeeEeeeecCCCCcccccEEEEEEEEE
Q 004208 430 VFDNCHLHPGGAKDSRIGKVRIRLSTLETD----RIYTHSYPLVALLPNGVKKMGEVQLAVRFT 489 (768)
Q Consensus 430 v~d~~~~~~~~~~d~~lG~~~i~l~~l~~~----~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 489 (768)
|||++.++ +|++||++.|+|.++..+ .....||+|.. .|+|+|+++++
T Consensus 105 V~D~d~~~----~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--------~G~i~l~l~~~ 156 (157)
T 2fk9_A 105 VFHETPLG----YDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--------EGKVFVVITLT 156 (157)
T ss_dssp EEECCSSS----SCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--------SCEEEEEEEEC
T ss_pred EEECCCCC----CCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--------CcEEEEEEEEE
Confidence 99999866 899999999999999865 67889999942 59999999985
No 9
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.80 E-value=6.6e-19 Score=165.76 Aligned_cols=127 Identities=24% Similarity=0.401 Sum_probs=102.1
Q ss_pred ccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeEeeeecCCCCCeeeeEEEEEeccCCCceEEEEEEEc
Q 004208 36 EQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN------YKGTTIPFEKKLNPEWNQVFAFTKERLQAISVELLVKDK 109 (768)
Q Consensus 36 ~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~~~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~ 109 (768)
...+.|.|+|++|++|+..|..|.+||||++++++ .+++|+++++|.||+|||+|.|.+... ...|.|+|||+
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d~ 95 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFDE 95 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEEC
Confidence 45789999999999999999889999999999984 578999999999999999999998764 67899999999
Q ss_pred CCC-CCceeEEEEEcCCCCCCCCCCC-CCCCCeEEEcccCCC-CccceEEEEEEEEc
Q 004208 110 MIV-NGDFIGKIKIDMPDIPKRVPPD-SPLAPEWKRLEAKDG-SRARGELMFAIWFG 163 (768)
Q Consensus 110 ~~~-~d~~lG~~~i~l~~l~~~~~~~-~~~~~~w~~L~~~~~-~~~~G~i~l~i~~~ 163 (768)
+.. +|++||++.++|.++..+.... .....+|++|.+..+ ....|+|.++++|.
T Consensus 96 d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 96 NRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 152 (153)
T ss_dssp CSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred CCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEe
Confidence 998 8999999999999997664321 223469999987643 34789999999885
No 10
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.80 E-value=7.5e-19 Score=164.39 Aligned_cols=125 Identities=20% Similarity=0.312 Sum_probs=106.0
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecCeeeeeccccCCCCCccccEEEEEEeCCCcEEEEEEEeCCCC--
Q 004208 359 VIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYANKWVRTRTVVDSFDPKWNEQYTWEVYDPYTVITLVVFDNCHL-- 436 (768)
Q Consensus 359 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~~~~~T~~~~~t~nP~wne~~~~~v~~~~~~l~v~v~d~~~~-- 436 (768)
..|.|+|+|++|+||+++ +..|.+||||+++++++.++|+++++++||.|||.|.|.+.++.+.|.|+|||++..
T Consensus 15 ~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~ 91 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAK---DKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIK 91 (148)
T ss_dssp CCEEEEEEEEEEESCCCC---STTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHH
T ss_pred cccEEEEEEEeeeCCCCC---CCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCcc
Confidence 358999999999999985 667899999999999999999999999999999999999998888999999999974
Q ss_pred -----CCCCCCCCceEEEEEeccccccCceeeeeEeeeecCCCCcccccEEEEEEEEE
Q 004208 437 -----HPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVALLPNGVKKMGEVQLAVRFT 489 (768)
Q Consensus 437 -----~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 489 (768)
..+.++|++||++.|+|.++.. ...+||+|..... ..+..|+|+|+++|+
T Consensus 92 ~~~~~~~~~~~~~~lG~~~i~l~~l~~--~~~~w~~L~~~~~-~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 92 SRVKQRFKRESDDFLGQTIIEVRTLSG--EMDVWYNLDKRTD-KSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHTTTSSCSSEEEEEEEEEGGGCCS--EEEEEEECBCSST-TCCCCCEEEEEEEEE
T ss_pred ccccccccCCCCccEEEEEEEHHHCcC--CCCEEEEcccCCC-CCCCceEEEEEEEEE
Confidence 0000379999999999999943 4579999975432 233569999999986
No 11
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.80 E-value=3.1e-19 Score=164.47 Aligned_cols=123 Identities=24% Similarity=0.321 Sum_probs=108.5
Q ss_pred CeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecCeeeeecccc-CCCCCccccEEEEEEeCCCcEEEEEEEeCCCC
Q 004208 358 PVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYANKWVRTRTVV-DSFDPKWNEQYTWEVYDPYTVITLVVFDNCHL 436 (768)
Q Consensus 358 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~~~~~T~~~~-~t~nP~wne~~~~~v~~~~~~l~v~v~d~~~~ 436 (768)
...|.|+|+|++|+||+.. +..|.+||||+++++++.+||++++ ++.||.|||.|.|.+.+....|.|+|||++.+
T Consensus 7 ~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~ 83 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDA---DFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVG 83 (136)
T ss_dssp CCEEEEEEEEEEEEECSSC---CSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSC
T ss_pred CCcEEEEEEEEeccCCCCc---ccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCC
Confidence 4678999999999999985 6678999999999999999999998 89999999999999998778999999999986
Q ss_pred CCCCCCCCceEEEEEecccc-ccCceeeeeEeeeecCCCCcccccEEEEEEEEEec
Q 004208 437 HPGGAKDSRIGKVRIRLSTL-ETDRIYTHSYPLVALLPNGVKKMGEVQLAVRFTCS 491 (768)
Q Consensus 437 ~~~~~~d~~lG~~~i~l~~l-~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~~ 491 (768)
+ +|++||.+.|+|.++ ..+.....||+|. . +.+..|+|+|+++|.+.
T Consensus 84 ~----~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~---~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 84 T----EDDAVGEATIPLEPVFVEGSIPPTAYNVV-K---DEEYKGEIWVALSFKPS 131 (136)
T ss_dssp T----TTCCSEEEEEESHHHHHHSEEEEEEEEEE-E---TTEEEEEEEEEEEEEEC
T ss_pred C----CCceEEEEEEEHHHhccCCCCCcEEEEee-c---CCccCEEEEEEEEEEeC
Confidence 5 899999999999999 5566667899998 2 33466999999999653
No 12
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=7.6e-19 Score=162.70 Aligned_cols=125 Identities=19% Similarity=0.330 Sum_probs=106.6
Q ss_pred CeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecCeeeeeccccCCCCCccccEEEEEEeCC----CcEEEEEEEeC
Q 004208 358 PVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYANKWVRTRTVVDSFDPKWNEQYTWEVYDP----YTVITLVVFDN 433 (768)
Q Consensus 358 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~~~~~T~~~~~t~nP~wne~~~~~v~~~----~~~l~v~v~d~ 433 (768)
...|.|+|+|++|+||+.. +. |.+||||+++++++.+||+++++++||.|||.|.|.+..+ ...|.|+|||+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~---~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKT---KF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CBCCEEEEEEEEEESCCCC---SS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCCcEEEEEEEEeeCCCCC---CC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 3467899999999999985 55 8999999999999999999999999999999999999753 56999999999
Q ss_pred CCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeec-CCCCcccccEEEEEEEEEe
Q 004208 434 CHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVAL-LPNGVKKMGEVQLAVRFTC 490 (768)
Q Consensus 434 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~-~~~g~~~~G~i~l~~~~~~ 490 (768)
+.++ +|++||++.|+|.++..+.....||+|... ...+....|+|+++++|.+
T Consensus 80 d~~~----~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 80 ETIG----QNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDP 133 (140)
T ss_dssp TCSS----SCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECC
T ss_pred CCCC----CCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEEC
Confidence 9865 899999999999999988877889883322 2234445699999999953
No 13
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.79 E-value=1e-18 Score=163.47 Aligned_cols=119 Identities=25% Similarity=0.428 Sum_probs=105.4
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeEeeeecCCCCCeeeeEEEEEeccCCCceEEEEEEEcCCC----
Q 004208 37 QMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGNYKGTTIPFEKKLNPEWNQVFAFTKERLQAISVELLVKDKMIV---- 112 (768)
Q Consensus 37 ~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~~~~---- 112 (768)
..+.|.|+|++|++|+..|..|.+||||++++++++.+|+++++|.||+|||+|.|.+... ...|.|+|||++..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~~~~ 93 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDIKSR 93 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSHHHH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCcccc
Confidence 4689999999999999999999999999999999999999999999999999999999766 57899999999973
Q ss_pred --------CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCC-ccceEEEEEEEEc
Q 004208 113 --------NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGS-RARGELMFAIWFG 163 (768)
Q Consensus 113 --------~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~G~i~l~i~~~ 163 (768)
+|++||++.++|.++... ..+|++|....+. ...|+|.++++|.
T Consensus 94 ~~~~~~~~~~~~lG~~~i~l~~l~~~-------~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 94 VKQRFKRESDDFLGQTIIEVRTLSGE-------MDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHTTTSSCSSEEEEEEEEEGGGCCSE-------EEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccccCCCCccEEEEEEEHHHCcCC-------CCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 899999999999998432 4799999976542 3679999999874
No 14
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.79 E-value=1.3e-18 Score=167.78 Aligned_cols=128 Identities=23% Similarity=0.399 Sum_probs=102.4
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeEeeeecCCCCCeeeeEEEEEeccCCCceEEEEEEEcC
Q 004208 37 QMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN------YKGTTIPFEKKLNPEWNQVFAFTKERLQAISVELLVKDKM 110 (768)
Q Consensus 37 ~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~~~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~~ 110 (768)
..+.|.|+|++|++|+..|..|.+||||++++++ .+++|++++++.||+|||+|.|.+... ...|.|+|||++
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~d 84 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDEN 84 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEECC
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEECC
Confidence 4689999999999999999999999999999986 578999999999999999999998754 578999999999
Q ss_pred CC-CCceeEEEEEcCCCCCCCCCC-CCCCCCeEEEcccCCC-CccceEEEEEEEEccc
Q 004208 111 IV-NGDFIGKIKIDMPDIPKRVPP-DSPLAPEWKRLEAKDG-SRARGELMFAIWFGTQ 165 (768)
Q Consensus 111 ~~-~d~~lG~~~i~l~~l~~~~~~-~~~~~~~w~~L~~~~~-~~~~G~i~l~i~~~~~ 165 (768)
.+ +|++||++.|+|.++...... +.....+||+|....+ .+..|+|.+++.|.+.
T Consensus 85 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 85 RLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp ----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 98 999999999999999765322 1223348999997653 3468999999999865
No 15
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.79 E-value=1.5e-19 Score=166.59 Aligned_cols=124 Identities=22% Similarity=0.322 Sum_probs=108.3
Q ss_pred ccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeEeeeec-CCCCCeeeeEEEEEeccCCCceEEEEEEEcCCC-C
Q 004208 36 EQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGNYKGTTIPFE-KKLNPEWNQVFAFTKERLQAISVELLVKDKMIV-N 113 (768)
Q Consensus 36 ~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~-~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~~~~-~ 113 (768)
.+.+.|.|+|++|++|+..|..|.+||||++++++++.+|++++ ++.||+|||+|.|.+.+ ....|.|+|||++.+ +
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~~~ 85 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVGTE 85 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSCTT
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCCCC
Confidence 36789999999999999999899999999999999999999998 89999999999999987 478999999999988 8
Q ss_pred CceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCccceEEEEEEEEcccC
Q 004208 114 GDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSRARGELMFAIWFGTQA 166 (768)
Q Consensus 114 d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~i~~~~~~ 166 (768)
|++||++.++|.++.... ....+|++|. .+.+..|+|.+++.|.+..
T Consensus 86 d~~lG~~~i~l~~l~~~~----~~~~~w~~L~--~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 86 DDAVGEATIPLEPVFVEG----SIPPTAYNVV--KDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp TCCSEEEEEESHHHHHHS----EEEEEEEEEE--ETTEEEEEEEEEEEEEECC
T ss_pred CceEEEEEEEHHHhccCC----CCCcEEEEee--cCCccCEEEEEEEEEEeCC
Confidence 999999999999984321 2246899998 2345789999999997644
No 16
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.78 E-value=1.6e-18 Score=163.17 Aligned_cols=124 Identities=23% Similarity=0.362 Sum_probs=101.1
Q ss_pred CeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC------eeeeeccccCCCCCccccEEEEEEeCCCcEEEEEEE
Q 004208 358 PVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN------KWVRTRTVVDSFDPKWNEQYTWEVYDPYTVITLVVF 431 (768)
Q Consensus 358 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~------~~~~T~~~~~t~nP~wne~~~~~v~~~~~~l~v~v~ 431 (768)
+..|.|+|+|++|+||+.+ +..|.+||||++++++ +.+||+++++++||.|||.|.|.+......|.|+||
T Consensus 17 ~~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~ 93 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKK---DILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVF 93 (153)
T ss_dssp TTCEEEEEEEEEEESCC----------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEE
T ss_pred CCccEEEEEEEEeeCCCCC---CCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEE
Confidence 5678999999999999985 6678999999999974 578999999999999999999999887789999999
Q ss_pred eCCCCCCCCCCCCceEEEEEeccccccCce------eeeeEeeeecCCCCcccccEEEEEEEEE
Q 004208 432 DNCHLHPGGAKDSRIGKVRIRLSTLETDRI------YTHSYPLVALLPNGVKKMGEVQLAVRFT 489 (768)
Q Consensus 432 d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~------~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 489 (768)
|++.++ +|++||++.|+|.++..+.. ...||+|..... +.+..|+|+++++|.
T Consensus 94 d~d~~~----~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~-~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 94 DENRLT----RDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSH-KSRVKGYLRLKMTYL 152 (153)
T ss_dssp ECCSSS----CCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSST-TCCCCSEEEEEEEEC
T ss_pred ECCCCc----CCCeeEEEEEEHHHcccCCCcccccccccccccccccC-CCCcceEEEEEEEEe
Confidence 999865 89999999999999987642 258999976543 234569999999983
No 17
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.77 E-value=1.5e-18 Score=161.92 Aligned_cols=121 Identities=21% Similarity=0.250 Sum_probs=101.9
Q ss_pred CCeeEEEEEEEEeecCCCCCC----------CCCCCcEEEEEECCeE-EeeecccCCCCCCcccceEEEEecCCCCCcEE
Q 004208 197 PKLWYLRVNVIEAQDLVPKQR----------NRNPEVFIKAIFGNVV-LKTTVSAKKTVNPTWNEDLMFVAAEPFDDPLI 265 (768)
Q Consensus 197 p~~~~L~V~v~~a~~L~~~d~----------~~~~dpyV~v~lg~~~-~~T~~i~~~t~nP~wne~f~f~~~~~~~~~L~ 265 (768)
...|.|+|+|++|++|+++|. .+.+||||++.++++. .+|+++++ |+||+|||+|.|.+.+ ...|.
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~k-tlnP~WNE~F~f~v~~--~~~L~ 102 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQK-TNKPTYNEEFCANVTD--GGHLE 102 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSS-CSSCEEEEEEEEEEEE--ECEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCC-CCCCccCcEEEEEcCC--CCEEE
Confidence 456799999999999998873 3679999999998865 69999887 9999999999999865 35899
Q ss_pred EEEEeccCCCCCceeEEEEEeccccccccCCCCCCceeEEcccCccCccccccccccceEEEEEecCC
Q 004208 266 LTVEDKLGDNKEECLGRLVLPLSKAGKRFLPLPAAAIWYNLERNIANGEEKKDVRFASRICLRFSLDG 333 (768)
Q Consensus 266 i~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~~~~~~g~~~~~~~~~g~i~l~v~~~~ 333 (768)
|+|||+|..+++++||++.|+|+++....+.+...+.||+|.+. |+|++++.++|
T Consensus 103 ~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~~-------------G~i~l~l~~~g 157 (157)
T 2fk9_A 103 LAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEPE-------------GKVFVVITLTG 157 (157)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBSS-------------CEEEEEEEEC-
T ss_pred EEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCCC-------------cEEEEEEEEEC
Confidence 99999999999999999999999987542233557899999753 89999988753
No 18
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.76 E-value=4.5e-18 Score=163.96 Aligned_cols=125 Identities=24% Similarity=0.367 Sum_probs=100.9
Q ss_pred CeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC------eeeeeccccCCCCCccccEEEEEEeCCCcEEEEEEE
Q 004208 358 PVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN------KWVRTRTVVDSFDPKWNEQYTWEVYDPYTVITLVVF 431 (768)
Q Consensus 358 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~------~~~~T~~~~~t~nP~wne~~~~~v~~~~~~l~v~v~ 431 (768)
...|.|+|+|++|+||+.+ +..|.+||||++++++ +.++|+++++++||.|||.|.|.+......|.|+||
T Consensus 5 ~~~g~L~V~v~~a~~L~~~---d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~ 81 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKK---DILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVF 81 (176)
T ss_dssp TTCEEEEEEEEEEESCC------CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEE
T ss_pred CCcEEEEEEEEEeeCCCCc---CCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEE
Confidence 4678999999999999985 6778999999999976 578999999999999999999999877779999999
Q ss_pred eCCCCCCCCCCCCceEEEEEeccccccCcee-e-----eeEeeeecCCCCcccccEEEEEEEEEe
Q 004208 432 DNCHLHPGGAKDSRIGKVRIRLSTLETDRIY-T-----HSYPLVALLPNGVKKMGEVQLAVRFTC 490 (768)
Q Consensus 432 d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~-~-----~~~~L~~~~~~g~~~~G~i~l~~~~~~ 490 (768)
|++.++ +|++||.+.|+|.++..+... . .||+|..... +.+..|+|+|+++|.+
T Consensus 82 d~d~~~----~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~-~~~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 82 DENRLT----RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSH-KSRVKGYLRLKMTYLP 141 (176)
T ss_dssp ECC--------CEEEEEEEEESCSCCBC------CCCCEEEECBCSST-TCCCCSEEEEEEEECC
T ss_pred ECCCCC----CCcEEEEEEEEHHHccccCCcccccccccEEEccccCC-CCccCEEEEEEEEEEe
Confidence 999865 899999999999999876432 1 7999976543 3345699999999953
No 19
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.76 E-value=1.6e-18 Score=157.30 Aligned_cols=115 Identities=21% Similarity=0.275 Sum_probs=98.6
Q ss_pred ccEEEEEEEEeecCCCC---CCCCCCCcEEEEEECC---eeeEeeeecCCCCCeeeeEEEEEeccCCCceEEEEEEEcCC
Q 004208 38 MEFLYVRIVRARDLQVN---QVTGTCDPYVEVKIGN---YKGTTIPFEKKLNPEWNQVFAFTKERLQAISVELLVKDKMI 111 (768)
Q Consensus 38 ~~~L~V~i~~a~~L~~~---d~~g~~dPyv~v~~~~---~~~~T~~~~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~~~ 111 (768)
.+.|.|+|++|++|+.+ |..|.+||||++++++ ++++|+++++|.||+|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 46899999999999984 6678999999999996 78899999999999999999999976667899999999998
Q ss_pred CCCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCccceEEEEEEE
Q 004208 112 VNGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSRARGELMFAIW 161 (768)
Q Consensus 112 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~i~ 161 (768)
.+|++||++.++|.++..+. ....|++|.+. ..|+|.+++.
T Consensus 82 ~~~~~iG~~~i~l~~l~~~~-----~~~~~~~L~~~----~~g~i~~~le 122 (126)
T 1rlw_A 82 VMDETLGTATFTVSSMKVGE-----KKEVPFIFNQV----TEMVLEMSLE 122 (126)
T ss_dssp SCCEEEEEEEEEGGGSCTTC-----EEEEEEEETTT----EEEEEEEEEE
T ss_pred CCCceeEEEEEEHHHccCCC-----cEEEEEEcCCC----ceEEEEEEEE
Confidence 88999999999999997552 24789999862 3477776654
No 20
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.76 E-value=1.7e-18 Score=159.30 Aligned_cols=116 Identities=21% Similarity=0.354 Sum_probs=98.9
Q ss_pred ccEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEECCee-eEeeeecCCCCCeeeeEEEEEeccCCCceEEEE
Q 004208 38 MEFLYVRIVRARDLQVNQVTGT-----------CDPYVEVKIGNYK-GTTIPFEKKLNPEWNQVFAFTKERLQAISVELL 105 (768)
Q Consensus 38 ~~~L~V~i~~a~~L~~~d~~g~-----------~dPyv~v~~~~~~-~~T~~~~~t~nP~Wne~f~f~~~~~~~~~L~i~ 105 (768)
.+.|.|+|++|++|++.|..+. +||||++++++++ .+|+++++|.||+|||+|.|.+.+. ..|.|+
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~~~ 82 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIELA 82 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC--CEEEEE
Confidence 4799999999999998875443 9999999998865 6999999999999999999998764 789999
Q ss_pred EEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCccceEEEEEEEEcc
Q 004208 106 VKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSRARGELMFAIWFGT 164 (768)
Q Consensus 106 V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~i~~~~ 164 (768)
|||+|.. +|++||++.+++.++..+.. .....|++|++ .|+|++.+.|..
T Consensus 83 V~d~d~~~~dd~iG~~~i~l~~l~~~~~---~~~~~w~~L~~------~G~i~l~l~~~~ 133 (136)
T 1gmi_A 83 VFHDAPIGYDDFVANCTIQFEELLQNGS---RHFEDWIDLEP------EGKVYVIIDLSG 133 (136)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHTSTTC---SEEEEEEECBS------SCEEEEEEEEEE
T ss_pred EEeCCCCCCCCEEEEEEEEHHHhcccCC---CCccEEEEcCC------CeEEEEEEEEEe
Confidence 9999988 89999999999999876421 12378999874 499999998864
No 21
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.76 E-value=9.5e-19 Score=164.15 Aligned_cols=115 Identities=14% Similarity=0.161 Sum_probs=99.5
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeEeeeecCCCCCeeeeEEEEEecc--
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN------YKGTTIPFEKKLNPEWNQVFAFTKER-- 96 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~~~~t~nP~Wne~f~f~~~~-- 96 (768)
...+++.|+. ..+.|.|+|++|+||+++|.+|.+||||++++.+ .++||+++++|+||+|||+|.|.+..
T Consensus 31 ~l~~sl~y~~--~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~ 108 (155)
T 2z0u_A 31 RIQIALKYDE--KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPA 108 (155)
T ss_dssp EEEEEEEEET--TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHH
T ss_pred EEEEEEEEcC--CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHH
Confidence 5678888885 4689999999999999999999999999999975 27899999999999999999999753
Q ss_pred CCCceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcc
Q 004208 97 LQAISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLE 145 (768)
Q Consensus 97 ~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~ 145 (768)
+....|.|+|||+|.+ ++++||++.++|.++.... ....+|++|.
T Consensus 109 l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~----~~~~~W~~L~ 154 (155)
T 2z0u_A 109 LHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSG----ERSTRWYNLL 154 (155)
T ss_dssp HHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTC----CCEEEEEEEB
T ss_pred hCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCC----CccccceEcc
Confidence 3457899999999998 9999999999999996321 2357999985
No 22
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.76 E-value=3.4e-18 Score=156.78 Aligned_cols=113 Identities=20% Similarity=0.321 Sum_probs=95.7
Q ss_pred cccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeEeeeecCCCCCeeeeEEEEE-ec--cCC
Q 004208 27 RLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKI-----GNYKGTTIPFEKKLNPEWNQVFAFT-KE--RLQ 98 (768)
Q Consensus 27 ~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~Wne~f~f~-~~--~~~ 98 (768)
-+.+.|+.. .+.|.|+|++|+||+. +..|.+||||++++ +..+.+|+++++|.||+|||+|.|. +. ++.
T Consensus 10 ~~~~~~~~~--~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~ 86 (134)
T 2b3r_A 10 AVKLSVSYR--NGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLR 86 (134)
T ss_dssp EEEEEEEEE--TTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHT
T ss_pred EEEEEEeec--CCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhC
Confidence 355566653 5899999999999987 77899999999999 3467899999999999999999999 65 335
Q ss_pred CceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccC
Q 004208 99 AISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAK 147 (768)
Q Consensus 99 ~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 147 (768)
...|.|+|||++.+ ++++||++.++|.++..+. ...+|++|.+.
T Consensus 87 ~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~~ 131 (134)
T 2b3r_A 87 QRELQLSVLSAESLRENFFLGGITLPLKDFNLSK-----ETVKWYQLTAA 131 (134)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTS-----CEEEEEECBC-
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCC-----CcceeEECCCc
Confidence 68999999999998 8999999999999997642 25799999875
No 23
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.76 E-value=4.2e-18 Score=154.59 Aligned_cols=117 Identities=15% Similarity=0.240 Sum_probs=97.8
Q ss_pred eeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC---eeeeeccccCCCCCccccEEEEEEeC-CCcEEEEEEEeCCC
Q 004208 360 IGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN---KWVRTRTVVDSFDPKWNEQYTWEVYD-PYTVITLVVFDNCH 435 (768)
Q Consensus 360 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~---~~~~T~~~~~t~nP~wne~~~~~v~~-~~~~l~v~v~d~~~ 435 (768)
.|.|+|+|++|+||++++..+..|.+||||++++++ +.+||+++++++||.|||.|.|.+.. ....|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 478999999999999742224568899999999985 78999999999999999999999965 45699999999997
Q ss_pred CCCCCCCCCceEEEEEeccccccCceeeeeEeeeecCCCCcccccEEEEEEE
Q 004208 436 LHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVALLPNGVKKMGEVQLAVR 487 (768)
Q Consensus 436 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~ 487 (768)
+ +|++||.+.|+|+++..+.....||+|.. +..|.|++++.
T Consensus 82 ~-----~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le 122 (126)
T 1rlw_A 82 V-----MDETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLE 122 (126)
T ss_dssp S-----CCEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEE
T ss_pred C-----CCceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEE
Confidence 4 48899999999999999988899999953 22356666554
No 24
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=2.6e-18 Score=156.69 Aligned_cols=114 Identities=27% Similarity=0.486 Sum_probs=95.2
Q ss_pred CCCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeEeeeecCCCCCeeeeEEEEEe---c
Q 004208 24 GRERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKI-----GNYKGTTIPFEKKLNPEWNQVFAFTK---E 95 (768)
Q Consensus 24 ~~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~Wne~f~f~~---~ 95 (768)
|...+++.|+. ..+.|.|+|++|+||+..|..|.+||||++++ +..+++|+++++|.||+|||+|.|.+ .
T Consensus 5 G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 82 (129)
T 2bwq_A 5 GQLSIKLWFDK--VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRR 82 (129)
T ss_dssp CEEEEEEEEET--TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGG
T ss_pred EEEEEEEEEcc--CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHH
Confidence 35677888885 45899999999999999999999999999999 34688999999999999999999995 2
Q ss_pred cCCCceEEEEEEEcCCC-C--CceeEEEEEcCCCCCCCCCCCCCCCCeEEEcc
Q 004208 96 RLQAISVELLVKDKMIV-N--GDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLE 145 (768)
Q Consensus 96 ~~~~~~L~i~V~d~~~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~ 145 (768)
++....|.|+|||++.. + +++||++.++|.++.... ..+||+|+
T Consensus 83 ~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~Lq 129 (129)
T 2bwq_A 83 EFRERMLEITLWDQARVREEESEFLGEILIELETALLDD------EPHWYKLQ 129 (129)
T ss_dssp GGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS------CEEEEECC
T ss_pred HhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc------CCccEECc
Confidence 34468999999999998 5 999999999999987642 57999984
No 25
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.75 E-value=4.6e-18 Score=156.46 Aligned_cols=120 Identities=21% Similarity=0.299 Sum_probs=100.0
Q ss_pred eeeEEEEEEEEecCCCCCCCCC--------CCCCcCcEEEEEecCee-eeeccccCCCCCccccEEEEEEeCCCcEEEEE
Q 004208 359 VIGVLELGILSAKELLPMKSRD--------GRGTTDAYCVAKYANKW-VRTRTVVDSFDPKWNEQYTWEVYDPYTVITLV 429 (768)
Q Consensus 359 ~~g~l~v~v~~a~~L~~~~~~~--------~~g~~dpyv~v~~g~~~-~~T~~~~~t~nP~wne~~~~~v~~~~~~l~v~ 429 (768)
..|.|+|+|++|+||++++... ..+.+||||+++++++. .+|+++++|+||.|||.|.|.+.+. ..|.|+
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~ 82 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELA 82 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEE
Confidence 4688999999999999863100 01249999999998765 6999999999999999999999876 799999
Q ss_pred EEeCCCCCCCCCCCCceEEEEEeccccccC--ceeeeeEeeeecCCCCcccccEEEEEEEEEec
Q 004208 430 VFDNCHLHPGGAKDSRIGKVRIRLSTLETD--RIYTHSYPLVALLPNGVKKMGEVQLAVRFTCS 491 (768)
Q Consensus 430 v~d~~~~~~~~~~d~~lG~~~i~l~~l~~~--~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~~ 491 (768)
|||++.++ +|++||++.|+|.++..+ .....|++|. ..|+|+|+++|.+.
T Consensus 83 V~d~d~~~----~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--------~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 83 VFHDAPIG----YDDFVANCTIQFEELLQNGSRHFEDWIDLE--------PEGKVYVIIDLSGS 134 (136)
T ss_dssp EEECCSSS----SCEEEEEEEEEHHHHTSTTCSEEEEEEECB--------SSCEEEEEEEEEEE
T ss_pred EEeCCCCC----CCCEEEEEEEEHHHhcccCCCCccEEEEcC--------CCeEEEEEEEEEec
Confidence 99999865 899999999999999874 3457899874 24999999999753
No 26
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.75 E-value=3e-18 Score=163.80 Aligned_cols=127 Identities=14% Similarity=0.126 Sum_probs=103.3
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeEeeeecCCCCCeeeeEEEEEeccCCCceEEEEEEEcCCC-CCc
Q 004208 37 QMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGNYKGTTIPFEKKLNPEWNQVFAFTKERLQAISVELLVKDKMIV-NGD 115 (768)
Q Consensus 37 ~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~~~~-~d~ 115 (768)
..+.|.|+|++|++|+..+..+.+||||+|++++++++|+++++|+||+|||+|.|.+.. ...|.|+|||+|.+ +|+
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~~~dd 111 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTLKSDV 111 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSSSCCE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCCCCCc
Confidence 467899999999999944444559999999999999999999999999999999999864 78999999999998 899
Q ss_pred eeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCC-CccceEEEEEEEEccc
Q 004208 116 FIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDG-SRARGELMFAIWFGTQ 165 (768)
Q Consensus 116 ~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~-~~~~G~i~l~i~~~~~ 165 (768)
+||++.++|.++.............|++|....+ ....|+|.+++.+...
T Consensus 112 ~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 112 LLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp EEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred eEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 9999999999886442211111367999988643 2467999999887643
No 27
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=4e-18 Score=157.97 Aligned_cols=118 Identities=27% Similarity=0.439 Sum_probs=101.8
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeEeeeecCCCCCeeeeEEEEEec---cCC
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIG---NYKGTTIPFEKKLNPEWNQVFAFTKE---RLQ 98 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~---~~~~~T~~~~~t~nP~Wne~f~f~~~---~~~ 98 (768)
...+++.|+. +.+.|.|+|++|++|+..|..|.+||||++++. .++.+|+++++|.||+|||+|.|.+. ++.
T Consensus 14 ~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~ 91 (141)
T 2d8k_A 14 RIQFSVGYNF--QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVV 91 (141)
T ss_dssp EEEEEEEECS--SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHT
T ss_pred EEEEEEEEeC--CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcc
Confidence 5678888885 568999999999999999999999999999995 35789999999999999999999852 334
Q ss_pred CceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCC
Q 004208 99 AISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDG 149 (768)
Q Consensus 99 ~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 149 (768)
...|.|+|||++.+ +|++||++.++|.++..+. ....|++|.+..+
T Consensus 92 ~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~~ 138 (141)
T 2d8k_A 92 QRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQ-----MQTFWKDLKPSGP 138 (141)
T ss_dssp TSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTS-----CEEEEECCEECCC
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCC-----CccEEEECcCCCC
Confidence 67899999999998 8999999999999997653 2578999998643
No 28
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.74 E-value=1.4e-17 Score=152.46 Aligned_cols=119 Identities=15% Similarity=0.269 Sum_probs=100.0
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC--eeeEeeeecCCCCCeeeeEEEEEeccCCCceEEEEEEEcCCC-C-
Q 004208 38 MEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN--YKGTTIPFEKKLNPEWNQVFAFTKERLQAISVELLVKDKMIV-N- 113 (768)
Q Consensus 38 ~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~--~~~~T~~~~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~~~~-~- 113 (768)
...|.|+|++|++|+..|..|.+||||++++++ ++++|+++++|.||+|||+|.|.+... ..|.|+|||++.. +
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTTSS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCCCC
Confidence 467999999999999999999999999999985 789999999999999999999998765 3599999999987 4
Q ss_pred --CceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCC---CccceEEEEEEEE
Q 004208 114 --GDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDG---SRARGELMFAIWF 162 (768)
Q Consensus 114 --d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~---~~~~G~i~l~i~~ 162 (768)
|++||++.+++.++..... ...+|++|....+ ....|+|.+++..
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~----~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKD----TGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTT----SCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccc----cCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 8999999999888733221 1368999987632 2368999998754
No 29
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=1.1e-18 Score=161.97 Aligned_cols=115 Identities=30% Similarity=0.481 Sum_probs=99.7
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe--------------eeEeeeecCCCCCeeeeEE
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGNY--------------KGTTIPFEKKLNPEWNQVF 90 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~~--------------~~~T~~~~~t~nP~Wne~f 90 (768)
...+++.|+ .+.|.|+|++|+||+..|..|.+||||++++++. +++|+++++|.||+|||+|
T Consensus 8 ~i~~~l~y~----~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f 83 (142)
T 1rh8_A 8 EIQLQINYD----LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTV 83 (142)
T ss_dssp EEEEEEEEE----TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEE
T ss_pred EEEEEEEEc----CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEE
Confidence 567888887 5799999999999999999999999999999863 4789999999999999999
Q ss_pred EEE-ec--cCCCceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCC
Q 004208 91 AFT-KE--RLQAISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKD 148 (768)
Q Consensus 91 ~f~-~~--~~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 148 (768)
.|. +. ++....|.|+|||++.+ ++++||++.++|.++.... ...+||+|.+..
T Consensus 84 ~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 140 (142)
T 1rh8_A 84 IYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLD-----NTPRWYPLKEQT 140 (142)
T ss_dssp EECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGT-----TCCEEEECBCCC
T ss_pred EECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCC-----CCCeEEECCccC
Confidence 997 43 34567999999999998 8999999999999986542 257999998764
No 30
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=1.7e-18 Score=160.54 Aligned_cols=120 Identities=27% Similarity=0.478 Sum_probs=102.3
Q ss_pred CCCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeEeeeecCCCCCeeeeEEEEEe-c--
Q 004208 24 GRERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKI-----GNYKGTTIPFEKKLNPEWNQVFAFTK-E-- 95 (768)
Q Consensus 24 ~~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~Wne~f~f~~-~-- 95 (768)
|...+++.|+. ..+.|.|+|++|++|+..|..|.+||||++++ +.++++|+++++|.||+|||+|.|.+ .
T Consensus 8 G~i~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~ 85 (141)
T 1v27_A 8 GQLSIKLWFDK--VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRR 85 (141)
T ss_dssp CEEEEEEEEET--TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTT
T ss_pred cEEEEEEEEeC--CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHH
Confidence 35677888885 45899999999999999999999999999999 34678999999999999999999994 2
Q ss_pred cCCCceEEEEEEEcCCC-C--CceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCc
Q 004208 96 RLQAISVELLVKDKMIV-N--GDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSR 151 (768)
Q Consensus 96 ~~~~~~L~i~V~d~~~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~ 151 (768)
++....|.|+|||++.+ + +++||++.++|.++.... ..+||+|.+...+.
T Consensus 86 ~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~------~~~W~~L~~~~~g~ 138 (141)
T 1v27_A 86 EFRERMLEITLWDQARVREEESEFLGEILIELETALLDD------EPHWYKLQTHDSGP 138 (141)
T ss_dssp GGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS------EEEEEECBCCSSCC
T ss_pred HhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC------CCceEECcccccCC
Confidence 34468999999999998 5 999999999999986542 57999999876543
No 31
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=5.7e-18 Score=159.07 Aligned_cols=116 Identities=29% Similarity=0.438 Sum_probs=100.8
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeEeeeecCCCCCeeeeEEEEEec--cCCC
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIG---NYKGTTIPFEKKLNPEWNQVFAFTKE--RLQA 99 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~---~~~~~T~~~~~t~nP~Wne~f~f~~~--~~~~ 99 (768)
...+++.|+. ..+.|.|+|++|+||+..|..+.+||||++++. .++++|+++++|.||+|||+|.|.+. ++..
T Consensus 30 ~l~~~l~y~~--~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 107 (152)
T 1rsy_A 30 KLQYSLDYDF--QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGG 107 (152)
T ss_dssp EEEEEEEEET--TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTT
T ss_pred EEEEEEEEeC--CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCC
Confidence 5678888875 468999999999999999989999999999995 36789999999999999999999875 3346
Q ss_pred ceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccC
Q 004208 100 ISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAK 147 (768)
Q Consensus 100 ~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 147 (768)
..|.|+|||++.+ +|++||++.++|.++..+. ...+|++|.++
T Consensus 108 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~ 151 (152)
T 1rsy_A 108 KTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQSA 151 (152)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSS-----CEEEEEECBCC
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEchhccCCC-----CcceEEECCCC
Confidence 8999999999998 8999999999999997653 25799999864
No 32
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.74 E-value=5.1e-18 Score=157.72 Aligned_cols=115 Identities=30% Similarity=0.443 Sum_probs=99.8
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeeeEeeeecCCCCCeeeeEEEEEec--cCCC
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIG---NYKGTTIPFEKKLNPEWNQVFAFTKE--RLQA 99 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~---~~~~~T~~~~~t~nP~Wne~f~f~~~--~~~~ 99 (768)
...+++.|+. ..+.|.|+|++|++|+..|..+.+||||++++. .++++|+++++|.||+|||+|.|.+. ++..
T Consensus 22 ~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 99 (143)
T 3f04_A 22 KLQYSLDYDF--QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGG 99 (143)
T ss_dssp EEEEEEEEET--TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTT
T ss_pred EEEEEEEEeC--CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCC
Confidence 4567777774 568999999999999999988999999999994 46789999999999999999999975 4446
Q ss_pred ceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEccc
Q 004208 100 ISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEA 146 (768)
Q Consensus 100 ~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~ 146 (768)
..|.|+|||++.+ +|++||++.++|.++..+. ....|++|++
T Consensus 100 ~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~ 142 (143)
T 3f04_A 100 KTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGH-----VTEEWRDLQS 142 (143)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTS-----CEEEEEECBC
T ss_pred CEEEEEEEeCCCCCCCceEEEEEEEHHHccCCC-----CcceEEECcC
Confidence 8999999999998 9999999999999997653 2578999975
No 33
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.73 E-value=2.9e-17 Score=150.29 Aligned_cols=124 Identities=23% Similarity=0.300 Sum_probs=99.4
Q ss_pred eeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC--eeeeeccccCCCCCccccEEEEEEeCCCcEEEEEEEeCCCCC
Q 004208 360 IGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN--KWVRTRTVVDSFDPKWNEQYTWEVYDPYTVITLVVFDNCHLH 437 (768)
Q Consensus 360 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~--~~~~T~~~~~t~nP~wne~~~~~v~~~~~~l~v~v~d~~~~~ 437 (768)
...|+|+|++|+||+++ |..|.+||||++++++ +.++|+++++++||.|||.|.|.+.++. .|.|+|||++.++
T Consensus 4 ~~~L~V~v~~a~~L~~~---d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKK---DFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIH 79 (132)
T ss_dssp EEEEEEEEEEEESCCCC---STTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTT
T ss_pred eEEEEEEEEEeECCCCC---CCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCC
Confidence 35699999999999985 6778999999999965 7899999999999999999999998764 4999999999864
Q ss_pred CCCCCCCceEEEEEeccccc-cCceeeeeEeeeecCCC-CcccccEEEEEEEE
Q 004208 438 PGGAKDSRIGKVRIRLSTLE-TDRIYTHSYPLVALLPN-GVKKMGEVQLAVRF 488 (768)
Q Consensus 438 ~~~~~d~~lG~~~i~l~~l~-~~~~~~~~~~L~~~~~~-g~~~~G~i~l~~~~ 488 (768)
. ...|++||.+.|++.++. .+.....|++|....+. ..+..|+|+++++.
T Consensus 80 ~-~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 80 K-KQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp S-STTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred C-CCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 0 013899999999999883 22223478999765332 23457999999875
No 34
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=2.1e-17 Score=152.29 Aligned_cols=116 Identities=17% Similarity=0.328 Sum_probs=97.8
Q ss_pred CCCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC----eeeEeeeecCCCCCeeeeEEEEEec--cC
Q 004208 24 GRERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN----YKGTTIPFEKKLNPEWNQVFAFTKE--RL 97 (768)
Q Consensus 24 ~~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~----~~~~T~~~~~t~nP~Wne~f~f~~~--~~ 97 (768)
|...+++.|+. ..+.|.|+|++|+ ++|..|.+||||++++.+ .+.+|+++++|+||+|||+|.|.+. ++
T Consensus 13 G~l~~sl~y~~--~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l 87 (138)
T 1wfm_A 13 PKLHYCLDYDC--QKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEEL 87 (138)
T ss_dssp CEEEEEEEEET--TTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSS
T ss_pred eEEEEEEEEeC--CCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHc
Confidence 35678888885 4689999999999 367889999999999942 3679999999999999999999975 34
Q ss_pred CCceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCC
Q 004208 98 QAISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDG 149 (768)
Q Consensus 98 ~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 149 (768)
....|.|+|||+|.+ +|++||++.++|.++..+. ...+|++|.+...
T Consensus 88 ~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~-----~~~~W~~L~~~~~ 135 (138)
T 1wfm_A 88 PTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPL-----GAAQWGELKTSGP 135 (138)
T ss_dssp TTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCT-----TCCEEEECCCCSC
T ss_pred CCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcc-----cccceeeCcCCCc
Confidence 467899999999998 9999999999999996442 3579999987643
No 35
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=6.6e-17 Score=149.74 Aligned_cols=120 Identities=23% Similarity=0.330 Sum_probs=102.0
Q ss_pred ccceEEEEEecCCCcccccCcccccCccccccccCCCCeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEec---Cee
Q 004208 321 FASRICLRFSLDGGYHVFDEATNYSSDLRSTMKQLWPPVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYA---NKW 397 (768)
Q Consensus 321 ~~g~i~l~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g---~~~ 397 (768)
..|+|++.+.+. +..+.|+|+|++|+||+.+ +..|.+||||++++. .+.
T Consensus 11 ~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~ 62 (141)
T 2d8k_A 11 NLGRIQFSVGYN-------------------------FQESTLTVKIMKAQELPAK---DFSGTSDPFVKIYLLPDKKHK 62 (141)
T ss_dssp CCCEEEEEEEEC-------------------------SSSCCEEEEEEEEESCCCC---SSSSCCCEEEEEEEESCCSSE
T ss_pred eeeEEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCC---CCCCCCCcEEEEEEECCCCcc
Confidence 468888888752 3345699999999999985 667899999999994 467
Q ss_pred eeeccccCCCCCccccEEEEEEeC----CCcEEEEEEEeCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeecC
Q 004208 398 VRTRTVVDSFDPKWNEQYTWEVYD----PYTVITLVVFDNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVALL 472 (768)
Q Consensus 398 ~~T~~~~~t~nP~wne~~~~~v~~----~~~~l~v~v~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~ 472 (768)
+||+++++++||.|||.|.|.+.. ....|.|+|||++.++ +|++||++.|+|.++..+.....||+|....
T Consensus 63 ~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~----~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 63 LETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFS----RNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp EECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSSS----SCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred EeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCCC----CCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 999999999999999999998642 3568999999999865 8999999999999999888788999998653
No 36
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=2.4e-17 Score=152.16 Aligned_cols=118 Identities=19% Similarity=0.277 Sum_probs=99.2
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCCC-CCCCcEEEEEECC---eeeEeeeecCCCCCeeeeEEEEE-ec--cC
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQVT-GTCDPYVEVKIGN---YKGTTIPFEKKLNPEWNQVFAFT-KE--RL 97 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~-g~~dPyv~v~~~~---~~~~T~~~~~t~nP~Wne~f~f~-~~--~~ 97 (768)
...+++.|+. ..+.|.|+|++|+||+..|.. |.+||||++++.+ ++++|+++++|.||+|||+|.|. +. ++
T Consensus 10 ~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~ 87 (138)
T 1ugk_A 10 TLFFSLEYNF--ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQI 87 (138)
T ss_dssp EEEEEEEEEG--GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTG
T ss_pred EEEEEEEEEC--CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHh
Confidence 4567777875 568999999999999999985 8999999999964 68899999999999999999995 53 33
Q ss_pred CCceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCC
Q 004208 98 QAISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKD 148 (768)
Q Consensus 98 ~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 148 (768)
....|.|+|||++.+ +|++||++.++|.++..... ....|++|....
T Consensus 88 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~----~~~~~~~l~~~~ 135 (138)
T 1ugk_A 88 QELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEG----KMLMNREIISGP 135 (138)
T ss_dssp GGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTC----CEEEEEECBSSS
T ss_pred ccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCC----cchhhhhhhcCC
Confidence 457999999999998 89999999999999976531 135679988754
No 37
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=2.7e-17 Score=154.45 Aligned_cols=105 Identities=25% Similarity=0.362 Sum_probs=92.8
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEec---CeeeeeccccCCCCCccccEEEEEEeC---CCcEEEEEEEe
Q 004208 359 VIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYA---NKWVRTRTVVDSFDPKWNEQYTWEVYD---PYTVITLVVFD 432 (768)
Q Consensus 359 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g---~~~~~T~~~~~t~nP~wne~~~~~v~~---~~~~l~v~v~d 432 (768)
..+.|+|+|++|+||+.+ +..|.+||||++++. .+.+||+++++++||.|||.|.|.+.. ....|.|+|||
T Consensus 40 ~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPAL---DMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp TTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCc---cCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 345799999999999985 667899999999993 467999999999999999999999874 35699999999
Q ss_pred CCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeee
Q 004208 433 NCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVA 470 (768)
Q Consensus 433 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 470 (768)
++.++ +|++||++.|+|.++..+....+||+|..
T Consensus 117 ~d~~~----~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 117 FDRFS----KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CCSSS----CCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCCC----CCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 99865 89999999999999988888899999964
No 38
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.71 E-value=1.8e-17 Score=155.77 Aligned_cols=118 Identities=21% Similarity=0.316 Sum_probs=99.6
Q ss_pred CCCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeEeeeecCCCCCeeeeEEEEEe--cc
Q 004208 24 GRERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN-----YKGTTIPFEKKLNPEWNQVFAFTK--ER 96 (768)
Q Consensus 24 ~~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~Wne~f~f~~--~~ 96 (768)
|...+++.|+.. .+.|.|+|++|++|+..| .|.+||||++++.+ .+.+|+++++|.||+|||+|.|.+ .+
T Consensus 14 G~~~lsL~y~~~--~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 90 (153)
T 3fbk_A 14 GAGQLRLSIDAQ--DRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEED 90 (153)
T ss_dssp CCCEEEEEEEES--SSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGG
T ss_pred CEEEEEEEEECC--CCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHH
Confidence 467888888864 689999999999999998 69999999999943 568999999999999999999998 45
Q ss_pred CCCceEEEEEEEcCCC-C-CceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCC
Q 004208 97 LQAISVELLVKDKMIV-N-GDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDG 149 (768)
Q Consensus 97 ~~~~~L~i~V~d~~~~-~-d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 149 (768)
. ...|.|+|||++.+ + |++||++.++|.++.... .....|++|.+...
T Consensus 91 ~-~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~----~~~~~W~~L~~~~~ 140 (153)
T 3fbk_A 91 D-QKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPD----KEISGWYYLLGEHL 140 (153)
T ss_dssp T-TSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC------CCEEEEEECBCTTG
T ss_pred h-CCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCC----CccccEEECCChhh
Confidence 5 35699999999997 5 999999999999986421 12578999988653
No 39
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.71 E-value=1.5e-17 Score=154.28 Aligned_cols=116 Identities=22% Similarity=0.334 Sum_probs=99.7
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeEeeeecCCCCCeeeeEEEEE-ec--c
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN-----YKGTTIPFEKKLNPEWNQVFAFT-KE--R 96 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~Wne~f~f~-~~--~ 96 (768)
...+++.|+ ...+.|.|+|++|++|+..|..|.+||||++++++ .+++|+++++|.||+|||+|.|. +. +
T Consensus 17 ~l~~~l~y~--~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~ 94 (142)
T 2chd_A 17 ALEFSLLYD--QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEED 94 (142)
T ss_dssp EEEEEEEEE--GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHH
T ss_pred eEEEEEEEe--CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHH
Confidence 567888887 35789999999999999999999999999999976 67899999999999999999998 53 3
Q ss_pred CCCceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccC
Q 004208 97 LQAISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAK 147 (768)
Q Consensus 97 ~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 147 (768)
+....|.|+|||++.+ +|++||++.++|.++..+. ....|++|+.+
T Consensus 95 ~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~-----~~~~~~~L~~p 141 (142)
T 2chd_A 95 MQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQ-----RKNFNICLERV 141 (142)
T ss_dssp HHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTC-----CEEEEEECBCC
T ss_pred ccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCC-----ccEEEEecccC
Confidence 3347899999999998 8999999999999997653 24678888754
No 40
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.71 E-value=4.6e-17 Score=155.52 Aligned_cols=123 Identities=15% Similarity=0.185 Sum_probs=101.2
Q ss_pred CeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecCeeeeeccccCCCCCccccEEEEEEeCCCcEEEEEEEeCCCCC
Q 004208 358 PVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYANKWVRTRTVVDSFDPKWNEQYTWEVYDPYTVITLVVFDNCHLH 437 (768)
Q Consensus 358 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~~~~~T~~~~~t~nP~wne~~~~~v~~~~~~l~v~v~d~~~~~ 437 (768)
...+.|+|+|++|++|+.. +..+.+||||+++++++.+||+++++++||.|||.|.|.+. +...|.|+|||++.++
T Consensus 33 ~~~~~L~V~V~~A~~L~~~---~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~ 108 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENK---KNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLK 108 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC-----CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSS
T ss_pred CCceEEEEEEEEeECCCCc---ccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCC
Confidence 3567899999999999843 33345999999999999999999999999999999999985 5779999999999865
Q ss_pred CCCCCCCceEEEEEeccccccCc-----eeeeeEeeeecCCCCcccccEEEEEEEEE
Q 004208 438 PGGAKDSRIGKVRIRLSTLETDR-----IYTHSYPLVALLPNGVKKMGEVQLAVRFT 489 (768)
Q Consensus 438 ~~~~~d~~lG~~~i~l~~l~~~~-----~~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 489 (768)
+|++||.+.|+|.++..+. ....|++|..... +.+..|+|.+.+++-
T Consensus 109 ----~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~-~~~~~G~L~v~l~~l 160 (173)
T 2nq3_A 109 ----SDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKE-PTETIGDLSICLDGL 160 (173)
T ss_dssp ----CCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSC-TTSEEEEEEEEEESE
T ss_pred ----CCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCC-CCcccEEEEEEEeee
Confidence 8999999999999987531 2357999987632 344569999888773
No 41
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=2.1e-17 Score=153.37 Aligned_cols=117 Identities=24% Similarity=0.323 Sum_probs=98.6
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeEeeeecCCCCCeeeeEEEEEec--cC
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN-----YKGTTIPFEKKLNPEWNQVFAFTKE--RL 97 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~Wne~f~f~~~--~~ 97 (768)
...+++.|+. ..+.|.|+|++|+||+..|..| +||||++++.+ .+++|+++++|.||+|||+|.|.+. ++
T Consensus 12 ~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 88 (142)
T 2dmg_A 12 QIQLTIRHSS--QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEV 88 (142)
T ss_dssp EEEEEEEEET--TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHH
T ss_pred eEEEEEEEeC--CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHh
Confidence 4577778874 4689999999999999999888 99999999953 5789999999999999999999974 33
Q ss_pred CCceEEEEEEEcCCC-C--CceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCC
Q 004208 98 QAISVELLVKDKMIV-N--GDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDG 149 (768)
Q Consensus 98 ~~~~L~i~V~d~~~~-~--d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 149 (768)
....|.|+|||++.+ + +++||++.++|.++.... ...+|++|.+..+
T Consensus 89 ~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~-----~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 89 QRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAK-----GWTQWYDLTEDSG 138 (142)
T ss_dssp HHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTT-----CBCCBCCCBCSCS
T ss_pred CcCEEEEEEEECCCccccCCcEEEEEEEecccccccc-----cccceeeccCCCC
Confidence 356899999999986 3 479999999999987653 3578999987643
No 42
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.71 E-value=1.3e-17 Score=155.79 Aligned_cols=122 Identities=14% Similarity=0.309 Sum_probs=101.9
Q ss_pred cccceEEEEEecCCCcccccCcccccCccccccccCCCCeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEec-----
Q 004208 320 RFASRICLRFSLDGGYHVFDEATNYSSDLRSTMKQLWPPVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYA----- 394 (768)
Q Consensus 320 ~~~g~i~l~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g----- 394 (768)
...|+|++.+... +..|.|.|.|++|+||+.++ ...|.+||||+++++
T Consensus 7 ~~~G~l~~sl~y~-------------------------~~~~~L~V~v~~a~~L~~~d--~~~~~~dpyv~v~l~~~~~~ 59 (148)
T 3fdw_A 7 FVTGRIAFSLKYE-------------------------QQTQSLVVHVKECHQLAYAD--EAKKRSNPYVKTYLLPDKSR 59 (148)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCSB--TTTTBCCEEEEEEEETCCSG
T ss_pred ccceEEEEEEEEe-------------------------CCCCEEEEEEEEecCCCCcc--cCCCCCCeEEEEEEEcCCcc
Confidence 3568888888752 33567999999999999852 256899999999996
Q ss_pred CeeeeeccccCCCCCccccEEEEEEeCC---CcEEEEEEEeCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeec
Q 004208 395 NKWVRTRTVVDSFDPKWNEQYTWEVYDP---YTVITLVVFDNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVAL 471 (768)
Q Consensus 395 ~~~~~T~~~~~t~nP~wne~~~~~v~~~---~~~l~v~v~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 471 (768)
...++|+++++++||.|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.++..+.....||+|...
T Consensus 60 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~----~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 60 QGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFG----RNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp GGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGG----CEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred cCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCCCc----CCcEEEEEEEEcccccccCCccceEECcCc
Confidence 3478999999999999999999998753 347999999999865 899999999999999877777899999765
Q ss_pred C
Q 004208 472 L 472 (768)
Q Consensus 472 ~ 472 (768)
.
T Consensus 136 ~ 136 (148)
T 3fdw_A 136 I 136 (148)
T ss_dssp -
T ss_pred c
Confidence 4
No 43
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.71 E-value=2.3e-17 Score=154.75 Aligned_cols=105 Identities=19% Similarity=0.272 Sum_probs=90.8
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEEeeecccCCCCCCcccceEEEEecCC--CCCcEEEEEEec
Q 004208 200 WYLRVNVIEAQDLVPKQRNRNPEVFIKAIFGN------VVLKTTVSAKKTVNPTWNEDLMFVAAEP--FDDPLILTVEDK 271 (768)
Q Consensus 200 ~~L~V~v~~a~~L~~~d~~~~~dpyV~v~lg~------~~~~T~~i~~~t~nP~wne~f~f~~~~~--~~~~L~i~V~d~ 271 (768)
+.|+|.|++|+||+.+|.+|.+||||++++.. .++||+++++ |+||+|||+|.|.+... ....|.|+|||+
T Consensus 43 ~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~-tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~ 121 (155)
T 2z0u_A 43 KQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDA-SDTLVFNEVFWVSMSYPALHQKTLRVDVCTT 121 (155)
T ss_dssp TEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEEC-CSSEEEEEEEEEECCHHHHHHCEEEEEEEEE
T ss_pred CEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCC-CCCCccccEEEEEcCHHHhCcCEEEEEEEEC
Confidence 46999999999999999999999999999954 3789999997 99999999999997543 356799999999
Q ss_pred cCCCCCceeEEEEEeccccccccCCCCCCceeEEccc
Q 004208 272 LGDNKEECLGRLVLPLSKAGKRFLPLPAAAIWYNLER 308 (768)
Q Consensus 272 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~~ 308 (768)
|..+++++||++.++|+++.. ......+||+|.+
T Consensus 122 d~~~~~d~iG~~~i~l~~l~~---~~~~~~~W~~L~~ 155 (155)
T 2z0u_A 122 DRSHLEECLGGAQISLAEVCR---SGERSTRWYNLLS 155 (155)
T ss_dssp CTTSCEEEEEEEEEECTTSCT---TCCCEEEEEEEBC
T ss_pred CCCCCCcEEEEEEEEHHHccC---CCCccccceEccC
Confidence 999999999999999999852 2345789999863
No 44
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.71 E-value=8.6e-18 Score=157.10 Aligned_cols=119 Identities=18% Similarity=0.236 Sum_probs=100.2
Q ss_pred CCCcccccccccccccEEEEEEEEeecCCCCC-CCCCCCcEEEEEECC-----eeeEeeeecCCCCCeeeeEEEEEecc-
Q 004208 24 GRERLTSSFDLVEQMEFLYVRIVRARDLQVNQ-VTGTCDPYVEVKIGN-----YKGTTIPFEKKLNPEWNQVFAFTKER- 96 (768)
Q Consensus 24 ~~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d-~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~Wne~f~f~~~~- 96 (768)
|...+++.|+. ..+.|.|+|++|+||+..| ..|.+||||++++.+ .+++|+++++|.||+|||+|.|.+..
T Consensus 10 G~l~~sl~y~~--~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 87 (148)
T 3fdw_A 10 GRIAFSLKYEQ--QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPES 87 (148)
T ss_dssp CEEEEEEEEET--TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCST
T ss_pred eEEEEEEEEeC--CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChh
Confidence 35677788875 4689999999999999888 588999999999973 47899999999999999999999754
Q ss_pred -CCCceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCC
Q 004208 97 -LQAISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDG 149 (768)
Q Consensus 97 -~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~ 149 (768)
+....|.|+|||+|.+ +|++||++.++|.++..+. ...+|++|.++.+
T Consensus 88 ~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~~ 137 (148)
T 3fdw_A 88 LLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDK-----KLDHCLPLHGKIS 137 (148)
T ss_dssp TGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHC-----CSEEEEECBCC--
T ss_pred HhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccC-----CccceEECcCccc
Confidence 3456899999999998 8999999999999986553 2479999998754
No 45
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.71 E-value=6.1e-17 Score=148.34 Aligned_cols=105 Identities=16% Similarity=0.255 Sum_probs=91.4
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEe-----cCeeeeeccccCCCCCccccEEEEE-EeC---CCcEEEEE
Q 004208 359 VIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKY-----ANKWVRTRTVVDSFDPKWNEQYTWE-VYD---PYTVITLV 429 (768)
Q Consensus 359 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~-----g~~~~~T~~~~~t~nP~wne~~~~~-v~~---~~~~l~v~ 429 (768)
..|.|+|.|++|+||+. +..|.+||||++++ +...+||+++++++||.|||+|.|. +.. ....|.|+
T Consensus 18 ~~~~L~V~V~~a~~L~~----~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~ 93 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT----EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLS 93 (134)
T ss_dssp ETTEEEEEEEEEECCCC----TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEE
T ss_pred cCCEEEEEEEEeeCCCC----CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEE
Confidence 34679999999999986 56788999999999 3467999999999999999999999 763 34699999
Q ss_pred EEeCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeec
Q 004208 430 VFDNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVAL 471 (768)
Q Consensus 430 v~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 471 (768)
|||++.++ +|++||++.|+|+++..++....||+|...
T Consensus 94 V~d~d~~~----~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 131 (134)
T 2b3r_A 94 VLSAESLR----ENFFLGGITLPLKDFNLSKETVKWYQLTAA 131 (134)
T ss_dssp EEECCSSS----CCEEEEEEEEEGGGSCTTSCEEEEEECBC-
T ss_pred EEECCCCC----CCcEEEEEEEEhhhccCCCCcceeEECCCc
Confidence 99999865 789999999999999988888999999653
No 46
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.71 E-value=1.8e-17 Score=152.75 Aligned_cols=114 Identities=26% Similarity=0.438 Sum_probs=98.1
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeEeeeecCCCCCeeeeEEEEEeccC-C
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKI-----GNYKGTTIPFEKKLNPEWNQVFAFTKERL-Q 98 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~Wne~f~f~~~~~-~ 98 (768)
...+++.| ..+.|.|+|++|++|+..|..|.+||||++++ +..+.+|++++++.||+|||+|.|.+... .
T Consensus 6 ~l~~~l~~----~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~ 81 (137)
T 3rdl_A 6 RIYLKAEV----TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDK 81 (137)
T ss_dssp EEEEEEEE----ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGG
T ss_pred EEEEEEEE----cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhc
Confidence 45667777 35899999999999999999999999999999 45678999999999999999999998542 2
Q ss_pred CceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCC
Q 004208 99 AISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKD 148 (768)
Q Consensus 99 ~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 148 (768)
...|.|+|||++.. +|++||++.++|.++.... ..+|++|.+..
T Consensus 82 ~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~------~~~W~~L~~~~ 126 (137)
T 3rdl_A 82 DRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP------ASGWYKLLNQE 126 (137)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC------EEEEEECBCHH
T ss_pred CCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc------cCceEECcCcc
Confidence 45899999999998 8999999999999996542 57999998654
No 47
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.70 E-value=2.3e-17 Score=157.94 Aligned_cols=114 Identities=22% Similarity=0.274 Sum_probs=97.3
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCC-CCCCCcEEEEEECC-----eeeEeeeecCCCCCeeeeEEEEEeccCC
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQV-TGTCDPYVEVKIGN-----YKGTTIPFEKKLNPEWNQVFAFTKERLQ 98 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~-~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~Wne~f~f~~~~~~ 98 (768)
...+++.| ..+.|.|+|++|+||+..|. .|.+||||++++.+ .+++|+++++|.||+|||+|.|.+...
T Consensus 20 ~l~~~l~y----~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~- 94 (171)
T 2q3x_A 20 DIQIGMED----KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQ- 94 (171)
T ss_dssp EEEEEEEE----ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCT-
T ss_pred EEEEEEEE----CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCC-
Confidence 45677777 36899999999999999985 79999999999874 378999999999999999999998643
Q ss_pred CceEEEEEE-EcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCC
Q 004208 99 AISVELLVK-DKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKD 148 (768)
Q Consensus 99 ~~~L~i~V~-d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 148 (768)
...|.|+|| |+|.+ +|++||++.++|.++..+. ...+|++|.+..
T Consensus 95 ~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~-----~~~~W~~L~~~~ 141 (171)
T 2q3x_A 95 GKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSS-----MVIGWYKLFPPS 141 (171)
T ss_dssp TEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTS-----CEEEEEECBCGG
T ss_pred CCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCC-----CcceeEECCCcc
Confidence 689999999 99998 8999999999999997653 257999998764
No 48
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=5.5e-17 Score=150.50 Aligned_cols=121 Identities=16% Similarity=0.231 Sum_probs=99.2
Q ss_pred cccceEEEEEecCCCcccccCcccccCccccccccCCCCeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC----
Q 004208 320 RFASRICLRFSLDGGYHVFDEATNYSSDLRSTMKQLWPPVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN---- 395 (768)
Q Consensus 320 ~~~g~i~l~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~---- 395 (768)
...|+|++.+... +..+.|.|.|++|+||+++ +..| +||||++++.+
T Consensus 8 ~~~G~l~~~l~y~-------------------------~~~~~L~v~v~~a~~L~~~---d~~g-~dpyv~v~l~~~~~~ 58 (142)
T 2dmg_A 8 SPLGQIQLTIRHS-------------------------SQRNKLIVVVHACRNLIAF---SEDG-SDPYVRMYLLPDKRR 58 (142)
T ss_dssp CSSCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCS---STTC-CCEEEEEEEESCCCS
T ss_pred CCcceEEEEEEEe-------------------------CCCCEEEEEEEEeECCCCC---CCCC-CCeeEEEEEEcCCCC
Confidence 4468888888752 2345799999999999986 5667 99999999943
Q ss_pred -eeeeeccccCCCCCccccEEEEEEeC---CCcEEEEEEEeCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeec
Q 004208 396 -KWVRTRTVVDSFDPKWNEQYTWEVYD---PYTVITLVVFDNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVAL 471 (768)
Q Consensus 396 -~~~~T~~~~~t~nP~wne~~~~~v~~---~~~~l~v~v~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 471 (768)
..++|+++++++||.|||.|.|.+.. ....|.|+|||++.++ ...|++||++.|+|.++..+....+||+|...
T Consensus 59 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~--~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 59 SGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFL--SKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp SSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSS--CCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred CCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCcc--ccCCcEEEEEEEecccccccccccceeeccCC
Confidence 56899999999999999999999864 2348999999999764 11357999999999999877777899999754
No 49
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=3.3e-17 Score=153.29 Aligned_cols=114 Identities=26% Similarity=0.460 Sum_probs=97.3
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeEeeeecCCCCCeeeeEEEEEeccC-C
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN-----YKGTTIPFEKKLNPEWNQVFAFTKERL-Q 98 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~Wne~f~f~~~~~-~ 98 (768)
...+++.|. .+.|.|+|++|++|+..|..+.+||||++++++ .+++|+++++|.||+|||+|.|.+... .
T Consensus 21 ~l~~~l~~~----~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~ 96 (149)
T 1a25_A 21 RIYIQAHID----REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDK 96 (149)
T ss_dssp EEEEEEEES----SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGG
T ss_pred EEEEEEEec----CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccC
Confidence 345566663 478999999999999999899999999999973 578999999999999999999998643 2
Q ss_pred CceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCC
Q 004208 99 AISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKD 148 (768)
Q Consensus 99 ~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 148 (768)
...|.|+|||++.+ +|++||++.|+|.++..+. ..+||+|.+..
T Consensus 97 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~------~~~W~~L~~~~ 141 (149)
T 1a25_A 97 DRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG------VDGWFKLLSQE 141 (149)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTCC------EEEEEECBCHH
T ss_pred CCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcCc------cCCeEEccCCC
Confidence 46899999999998 8999999999999987641 57899998653
No 50
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.70 E-value=4.5e-17 Score=151.28 Aligned_cols=104 Identities=25% Similarity=0.370 Sum_probs=92.4
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEe---cCeeeeeccccCCCCCccccEEEEEEeCC---CcEEEEEEEe
Q 004208 359 VIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKY---ANKWVRTRTVVDSFDPKWNEQYTWEVYDP---YTVITLVVFD 432 (768)
Q Consensus 359 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~---g~~~~~T~~~~~t~nP~wne~~~~~v~~~---~~~l~v~v~d 432 (768)
..+.|.|+|++|+||+.+ +..+.+||||++++ +.+.++|++++++.||.|||.|.|.+... ...|.|+|||
T Consensus 32 ~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 108 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPAL---DMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 108 (143)
T ss_dssp TTTEEEEEEEEEECCCCB---GGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCC---CCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEe
Confidence 446799999999999985 56788999999999 45689999999999999999999998742 4699999999
Q ss_pred CCCCCCCCCCCCceEEEEEeccccccCceeeeeEeee
Q 004208 433 NCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLV 469 (768)
Q Consensus 433 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 469 (768)
++.++ +|++||++.|+|.++..+....+||+|.
T Consensus 109 ~d~~~----~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 109 FDRFS----KHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp CCSSS----CCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred CCCCC----CCceEEEEEEEHHHccCCCCcceEEECc
Confidence 99865 8999999999999999988889999985
No 51
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=7.7e-17 Score=149.35 Aligned_cols=107 Identities=22% Similarity=0.370 Sum_probs=90.5
Q ss_pred eeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEe-----cCeeeeeccccCCCCCccccEEEEEEeC----CCcEEEEEE
Q 004208 360 IGVLELGILSAKELLPMKSRDGRGTTDAYCVAKY-----ANKWVRTRTVVDSFDPKWNEQYTWEVYD----PYTVITLVV 430 (768)
Q Consensus 360 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~-----g~~~~~T~~~~~t~nP~wne~~~~~v~~----~~~~l~v~v 430 (768)
.+.|+|.|++|+||+.+ +..|.+||||++++ +.+.+||+++++++||.|||.|.|.+.. ....|.|+|
T Consensus 20 ~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V 96 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSR---EDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITL 96 (141)
T ss_dssp TTEEEEEEEEEESCCCC---SSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEE
T ss_pred CCEEEEEEEEccCCCCc---CCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEE
Confidence 35799999999999985 67789999999999 4577999999999999999999999542 236999999
Q ss_pred EeCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeecC
Q 004208 431 FDNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVALL 472 (768)
Q Consensus 431 ~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~ 472 (768)
||++.++ .++|++||++.|+|.++..+. ..+||+|....
T Consensus 97 ~d~d~~~--~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~ 135 (141)
T 1v27_A 97 WDQARVR--EEESEFLGEILIELETALLDD-EPHWYKLQTHD 135 (141)
T ss_dssp EEBCSSS--SCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCS
T ss_pred EECCCCc--CCCCceEEEEEEEccccCCCC-CCceEECcccc
Confidence 9999865 113899999999999987655 68999997654
No 52
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=9.3e-17 Score=146.32 Aligned_cols=102 Identities=25% Similarity=0.437 Sum_probs=84.7
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEEeeecccCCCCCCcccceEEEEecC---CCCCcEEEEEEec
Q 004208 200 WYLRVNVIEAQDLVPKQRNRNPEVFIKAIF-----GNVVLKTTVSAKKTVNPTWNEDLMFVAAE---PFDDPLILTVEDK 271 (768)
Q Consensus 200 ~~L~V~v~~a~~L~~~d~~~~~dpyV~v~l-----g~~~~~T~~i~~~t~nP~wne~f~f~~~~---~~~~~L~i~V~d~ 271 (768)
+.|.|+|++|++|+.++..+.+||||++++ +.++++|+++++ +.||.|||+|.|.+.. .....|.|+|||+
T Consensus 18 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~ 96 (129)
T 2bwq_A 18 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKK-TLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 96 (129)
T ss_dssp TEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSS-BSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccC-CCCCccccEEEEccCCHHHhcCCeEEEEEEEC
Confidence 469999999999999999999999999999 457899999997 9999999999998532 2356899999999
Q ss_pred cCCCC--CceeEEEEEeccccccccCCCCCCceeEEcc
Q 004208 272 LGDNK--EECLGRLVLPLSKAGKRFLPLPAAAIWYNLE 307 (768)
Q Consensus 272 d~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~ 307 (768)
+..++ +++||++.++|.++... ...+||+|+
T Consensus 97 d~~~~~~~~~lG~~~i~l~~l~~~-----~~~~W~~Lq 129 (129)
T 2bwq_A 97 ARVREEESEFLGEILIELETALLD-----DEPHWYKLQ 129 (129)
T ss_dssp -------CEEEEEEEEEGGGCCCS-----SCEEEEECC
T ss_pred CcCcCcCCceeEEEEEEccccCCC-----cCCccEECc
Confidence 98876 99999999999998742 278999985
No 53
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.69 E-value=6.1e-17 Score=152.13 Aligned_cols=107 Identities=25% Similarity=0.346 Sum_probs=91.2
Q ss_pred CeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEec-----CeeeeeccccCCCCCccccEEEEEEe--CCCcEEEEEE
Q 004208 358 PVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYA-----NKWVRTRTVVDSFDPKWNEQYTWEVY--DPYTVITLVV 430 (768)
Q Consensus 358 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g-----~~~~~T~~~~~t~nP~wne~~~~~v~--~~~~~l~v~v 430 (768)
+..|.|.|+|++|+||+++ + .|.+||||++++. ...++|+++++++||.|||.|.|.+. +....|.|+|
T Consensus 24 ~~~~~L~V~v~~a~~L~~~---d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 99 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISK---Q-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTV 99 (153)
T ss_dssp ESSSEEEEEEEEEESCCCC---S-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCC---C-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEE
Confidence 3456799999999999985 4 4889999999993 35699999999999999999999994 4556799999
Q ss_pred EeCCCCCCCCCC-CCceEEEEEecccccc-CceeeeeEeeeecC
Q 004208 431 FDNCHLHPGGAK-DSRIGKVRIRLSTLET-DRIYTHSYPLVALL 472 (768)
Q Consensus 431 ~d~~~~~~~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~L~~~~ 472 (768)
||++.++ + |++||.+.|+|.++.. +.....||+|....
T Consensus 100 ~d~d~~~----~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 100 WNRASQS----RQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp EECCSSG----GGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred EeCCCCC----CCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 9999854 5 8999999999999985 67788999997653
No 54
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.69 E-value=1.6e-16 Score=151.47 Aligned_cols=101 Identities=27% Similarity=0.368 Sum_probs=89.7
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeEeeeecCCCCCeeeeEEEEEecc--C
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN-----YKGTTIPFEKKLNPEWNQVFAFTKER--L 97 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~Wne~f~f~~~~--~ 97 (768)
...+++.|+. ..+.|.|+|++|++|+..|..|.+||||++++++ .+++|+++++|.||+|||+|.|.+.. +
T Consensus 25 ~l~~~l~y~~--~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 102 (166)
T 2cm5_A 25 KILVSLMYST--QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDL 102 (166)
T ss_dssp EEEEEEEEET--TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGG
T ss_pred eEEEEEEEEC--CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhc
Confidence 4567777764 5789999999999999999999999999999986 57899999999999999999999853 3
Q ss_pred CCceEEEEEEEcCCC-CCceeEEEEEcCCCC
Q 004208 98 QAISVELLVKDKMIV-NGDFIGKIKIDMPDI 127 (768)
Q Consensus 98 ~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l 127 (768)
....|.|+|||++.+ ++++||++.+++..+
T Consensus 103 ~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 103 AKKSLDISVWDYDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp GGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred CCCEEEEEEEECCCCCCCcEEEeEEEecccC
Confidence 467999999999998 899999999999986
No 55
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=5.5e-17 Score=151.46 Aligned_cols=118 Identities=23% Similarity=0.286 Sum_probs=98.3
Q ss_pred CCCcccccccccccccEEEEEEEEeecCCCC-CC------CCCCCcEEEEEECC---eeeEeeeecCCCCCeeeeEEEEE
Q 004208 24 GRERLTSSFDLVEQMEFLYVRIVRARDLQVN-QV------TGTCDPYVEVKIGN---YKGTTIPFEKKLNPEWNQVFAFT 93 (768)
Q Consensus 24 ~~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~-d~------~g~~dPyv~v~~~~---~~~~T~~~~~t~nP~Wne~f~f~ 93 (768)
|...+++.|+. ..+.|.|+|++|+||+.. |. .|.+||||++++.+ ++++|++++++.||+|||+|.|.
T Consensus 13 G~l~~~l~y~~--~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~ 90 (147)
T 2enp_A 13 GMLHFSTQYDL--LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFE 90 (147)
T ss_dssp CEEEEEEEEET--TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEEC
T ss_pred eEEEEEEEEcC--CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEE
Confidence 35678888885 468999999999999984 43 35899999999973 57899999999999999999999
Q ss_pred ecc--CCCceEEEEEEEcCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCC
Q 004208 94 KER--LQAISVELLVKDKMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKD 148 (768)
Q Consensus 94 ~~~--~~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 148 (768)
+.. +....|.|+|||++.+ ++++||++.++|.++.... ....|+.|.+..
T Consensus 91 v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~-----~~~~w~~L~~~~ 143 (147)
T 2enp_A 91 IPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVK-----GGHWWKALIPSG 143 (147)
T ss_dssp CCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTT-----CCCEEECCBCCC
T ss_pred eChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCC-----CccEEEEeecCC
Confidence 753 3356899999999998 8999999999999996653 246899998653
No 56
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.69 E-value=1.2e-16 Score=147.37 Aligned_cols=102 Identities=31% Similarity=0.481 Sum_probs=89.1
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeEeeeecCCCCCeeeeEEEEEecc--C
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN-----YKGTTIPFEKKLNPEWNQVFAFTKER--L 97 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~Wne~f~f~~~~--~ 97 (768)
...+++.|+. ..+.|.|+|++|++|+..|..|.+||||++++++ .+.+|+++++|.||+|||+|.|.+.. +
T Consensus 4 ~l~~sl~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l 81 (138)
T 3n5a_A 4 ELLLSLCYNP--SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKL 81 (138)
T ss_dssp EEEEEEEEET--TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGG
T ss_pred EEEEEEEEcC--CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhc
Confidence 4567777774 5689999999999999999999999999999974 47899999999999999999999754 3
Q ss_pred CCceEEEEEEEcCCC-CCceeEEEEEcCCCCC
Q 004208 98 QAISVELLVKDKMIV-NGDFIGKIKIDMPDIP 128 (768)
Q Consensus 98 ~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~ 128 (768)
....|.|+|||++.+ +|++||++.+++.++.
T Consensus 82 ~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 82 RETTIIITVMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp GGEEEEEEEEECCSSSCCEEEEEEEESSSSCH
T ss_pred CceEEEEEEEECCCCCCCcEEEEEEEccccCC
Confidence 347899999999998 8999999999998753
No 57
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.68 E-value=1.8e-16 Score=150.03 Aligned_cols=120 Identities=25% Similarity=0.368 Sum_probs=97.4
Q ss_pred CCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eeeEeeeecCCCCCeeeeEEEEEecc--C
Q 004208 25 RERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN-----YKGTTIPFEKKLNPEWNQVFAFTKER--L 97 (768)
Q Consensus 25 ~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~-----~~~~T~~~~~t~nP~Wne~f~f~~~~--~ 97 (768)
...+++.|+. ..+.|.|+|++|+||+..|..|.+||||++++++ .+.+|+++++|.||+|||+|.|.+.. +
T Consensus 13 ~l~~~l~y~~--~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 90 (159)
T 1tjx_A 13 DICFSLRYVP--TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQI 90 (159)
T ss_dssp EEEEEEEEET--TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGG
T ss_pred eEEEEEEEcC--CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHh
Confidence 4567777774 4689999999999999999999999999999963 46899999999999999999999753 3
Q ss_pred CCceEEEEEEEcCCC-CCceeEEEEEcCCCCCCC--------CCCCCCCCCeEEEcccC
Q 004208 98 QAISVELLVKDKMIV-NGDFIGKIKIDMPDIPKR--------VPPDSPLAPEWKRLEAK 147 (768)
Q Consensus 98 ~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~l~~~--------~~~~~~~~~~w~~L~~~ 147 (768)
....|.|+|||++.+ +|++||++.|++..+..+ ..+ .....+|++|.+.
T Consensus 91 ~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~-~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 91 QKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANP-RRPIAQWHTLQVE 148 (159)
T ss_dssp GGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHST-TCCEEEEEECBCH
T ss_pred CCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCC-CCeeeeEEECcCc
Confidence 457899999999998 899999999999864110 001 1234689988764
No 58
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.68 E-value=3e-16 Score=144.60 Aligned_cols=117 Identities=17% Similarity=0.144 Sum_probs=97.3
Q ss_pred cccceEEEEEecCCCcccccCcccccCccccccccCCCCeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC----
Q 004208 320 RFASRICLRFSLDGGYHVFDEATNYSSDLRSTMKQLWPPVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN---- 395 (768)
Q Consensus 320 ~~~g~i~l~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~---- 395 (768)
...|+|++.+... +..+.|+|+|++|++ + +..|.+||||++++.+
T Consensus 10 ~~~G~l~~sl~y~-------------------------~~~~~L~V~v~~a~~---~---d~~g~sDPyv~v~l~~~~~~ 58 (138)
T 1wfm_A 10 NQAPKLHYCLDYD-------------------------CQKAELFVTRLEAVT---S---NHDGGCDCYVQGSVANRTGS 58 (138)
T ss_dssp SSCCEEEEEEEEE-------------------------TTTTEEEEEEEEEEC---C---CCSSCCCEEEEEEEEETTEE
T ss_pred CcceEEEEEEEEe-------------------------CCCCEEEEEEEEEEc---C---CCCCCcceEEEEEEEcCCCc
Confidence 3468888888752 234579999999993 2 6778999999999932
Q ss_pred eeeeeccccCCCCCccccEEEEEEeCC---CcEEEEEEEeCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeec
Q 004208 396 KWVRTRTVVDSFDPKWNEQYTWEVYDP---YTVITLVVFDNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVAL 471 (768)
Q Consensus 396 ~~~~T~~~~~t~nP~wne~~~~~v~~~---~~~l~v~v~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 471 (768)
..++|+++++++||.|||.|.|.+... ...|.|+|||++.++ +|++||++.|+|.++..+.....||+|...
T Consensus 59 ~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~~----~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 59 VEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRFS----RHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp EEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSSC----TTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred ccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCCC----CCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 358999999999999999999998753 458999999999866 899999999999999866667899999754
No 59
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=6.9e-17 Score=149.83 Aligned_cols=104 Identities=26% Similarity=0.401 Sum_probs=90.3
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecCe--------------eeeeccccCCCCCccccEEEEE-EeC---C
Q 004208 361 GVLELGILSAKELLPMKSRDGRGTTDAYCVAKYANK--------------WVRTRTVVDSFDPKWNEQYTWE-VYD---P 422 (768)
Q Consensus 361 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~~--------------~~~T~~~~~t~nP~wne~~~~~-v~~---~ 422 (768)
|.|.|+|++|+||+++ +..|.+||||++++++. .+||+++++++||.|||.|.|. +.. .
T Consensus 18 ~~L~V~v~~a~~L~~~---d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~ 94 (142)
T 1rh8_A 18 GNLIIHILQARNLVPR---DNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLM 94 (142)
T ss_dssp TEEEEEEEEEESCCCC---SSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHT
T ss_pred CEEEEEEEEecCCCCC---CCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHcc
Confidence 4699999999999985 67789999999999763 5899999999999999999997 542 3
Q ss_pred CcEEEEEEEeCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeec
Q 004208 423 YTVITLVVFDNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVAL 471 (768)
Q Consensus 423 ~~~l~v~v~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 471 (768)
...|.|+|||++.++ +|++||.+.|+|+++..+.....||+|...
T Consensus 95 ~~~l~i~V~d~d~~~----~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 139 (142)
T 1rh8_A 95 KKTLEVTVWDYDRFS----SNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ 139 (142)
T ss_dssp TCEEEEEEEEECSSS----CEEEEEEEEEETTSCGGGTTCCEEEECBCC
T ss_pred CCEEEEEEEECCCCC----CCceEEEEEEeccccccCCCCCeEEECCcc
Confidence 569999999999865 899999999999999877667899999653
No 60
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.67 E-value=2.8e-16 Score=144.72 Aligned_cols=103 Identities=23% Similarity=0.429 Sum_probs=91.2
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEe-----cCeeeeeccccCCCCCccccEEEEEEeCC--CcEEEEEEEeC
Q 004208 361 GVLELGILSAKELLPMKSRDGRGTTDAYCVAKY-----ANKWVRTRTVVDSFDPKWNEQYTWEVYDP--YTVITLVVFDN 433 (768)
Q Consensus 361 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~-----g~~~~~T~~~~~t~nP~wne~~~~~v~~~--~~~l~v~v~d~ 433 (768)
|.|.|+|++|+||+.+ +..|.+||||++++ +...++|++++++.||.|||.|.|.+... ...|.|+|||+
T Consensus 16 ~~L~v~v~~a~~L~~~---d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~ 92 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPM---DPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDW 92 (137)
T ss_dssp TEEEEEEEEEESCCCC---STTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCC---CCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEEC
Confidence 5699999999999985 67789999999999 45679999999999999999999999753 35899999999
Q ss_pred CCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeec
Q 004208 434 CHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVAL 471 (768)
Q Consensus 434 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 471 (768)
+.++ +|++||.+.|+|+++..+. ..+||+|...
T Consensus 93 d~~~----~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 93 DRTT----RNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp CSSS----CCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CCCC----CCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 9865 8999999999999998765 6899999755
No 61
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.67 E-value=3.8e-16 Score=147.76 Aligned_cols=120 Identities=26% Similarity=0.355 Sum_probs=99.2
Q ss_pred cccceEEEEEecCCCcccccCcccccCccccccccCCCCeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC----
Q 004208 320 RFASRICLRFSLDGGYHVFDEATNYSSDLRSTMKQLWPPVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN---- 395 (768)
Q Consensus 320 ~~~g~i~l~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~---- 395 (768)
...|+|++.+... +..|.|.|+|++|+||+.+ +..|.+||||++++++
T Consensus 9 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~l~~~~~~ 60 (159)
T 1tjx_A 9 EKLGDICFSLRYV-------------------------PTAGKLTVVILEAKNLKKM---DVGGLSDPYVKIHLMQNGKR 60 (159)
T ss_dssp GCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEESCCCC---STTSCCCEEEEEEEEETTEE
T ss_pred CcCCeEEEEEEEc-------------------------CCCCEEEEEEEEeeCCCCc---cCCCCCCeEEEEEEEeCCce
Confidence 4568898888752 3456799999999999985 6778999999999953
Q ss_pred -eeeeeccccCCCCCccccEEEEEEeCC---CcEEEEEEEeCCCCCCCCCCCCceEEEEEecccc------------ccC
Q 004208 396 -KWVRTRTVVDSFDPKWNEQYTWEVYDP---YTVITLVVFDNCHLHPGGAKDSRIGKVRIRLSTL------------ETD 459 (768)
Q Consensus 396 -~~~~T~~~~~t~nP~wne~~~~~v~~~---~~~l~v~v~d~~~~~~~~~~d~~lG~~~i~l~~l------------~~~ 459 (768)
..+||+++++++||.|||.|.|.+... ...|.|+|||++.++ +|++||.+.|++..+ .++
T Consensus 61 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~----~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~ 136 (159)
T 1tjx_A 61 LKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIG----KNDAIGKVFVGYNSTGAELRHWSDMLANPR 136 (159)
T ss_dssp EEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS----CCEEEEEEEEETTCCHHHHHHHHHHHHSTT
T ss_pred eceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCC----CCceEEEEEECCCCCCcHHHHHHHHHHCCC
Confidence 468999999999999999999998753 358999999999865 899999999999964 234
Q ss_pred ceeeeeEeeeec
Q 004208 460 RIYTHSYPLVAL 471 (768)
Q Consensus 460 ~~~~~~~~L~~~ 471 (768)
+....||+|...
T Consensus 137 ~~~~~W~~L~~~ 148 (159)
T 1tjx_A 137 RPIAQWHTLQVE 148 (159)
T ss_dssp CCEEEEEECBCH
T ss_pred CeeeeEEECcCc
Confidence 567899999754
No 62
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=6.2e-16 Score=142.56 Aligned_cols=107 Identities=20% Similarity=0.220 Sum_probs=89.9
Q ss_pred eEEEEEEEEeecCCCCCCC-CCCCcEEEEEEC---CeEEeeecccCCCCCCcccceEEEE-ecCC--CCCcEEEEEEecc
Q 004208 200 WYLRVNVIEAQDLVPKQRN-RNPEVFIKAIFG---NVVLKTTVSAKKTVNPTWNEDLMFV-AAEP--FDDPLILTVEDKL 272 (768)
Q Consensus 200 ~~L~V~v~~a~~L~~~d~~-~~~dpyV~v~lg---~~~~~T~~i~~~t~nP~wne~f~f~-~~~~--~~~~L~i~V~d~d 272 (768)
+.|.|+|++|++|+.+|.. +.+||||++.+. .+.++|+++++ ++||+|||+|.|. +... ....|.|+|||+|
T Consensus 22 ~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d 100 (138)
T 1ugk_A 22 KAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRK-TLDPAFDETFTFYGIPYTQIQELALHFTILSFD 100 (138)
T ss_dssp TEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSS-CSSCEEEEEEEEECCCSTTGGGCEEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcC-CCCCcEeeEEEEcCcCHHHhccCEEEEEEEECC
Confidence 4699999999999999985 899999999994 47899999997 9999999999995 5432 3468999999999
Q ss_pred CCCCCceeEEEEEeccccccccCCCCCCceeEEcccCc
Q 004208 273 GDNKEECLGRLVLPLSKAGKRFLPLPAAAIWYNLERNI 310 (768)
Q Consensus 273 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~~~~ 310 (768)
..+++++||++.++|.++... ......|++|....
T Consensus 101 ~~~~~~~lG~~~i~l~~l~~~---~~~~~~~~~l~~~~ 135 (138)
T 1ugk_A 101 RFSRDDIIGEVLIPLSGIELS---EGKMLMNREIISGP 135 (138)
T ss_dssp SSCCCCCCEEEEEECTTCCCT---TCCEEEEEECBSSS
T ss_pred CCCCCcEEEEEEEehhHccCC---CCcchhhhhhhcCC
Confidence 999999999999999998732 22345678888753
No 63
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.67 E-value=2.1e-16 Score=148.59 Aligned_cols=101 Identities=28% Similarity=0.387 Sum_probs=82.6
Q ss_pred CCCcccccccccccccEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--Ce---eeEeeeecCCCCCeeeeEEEEEeccC-
Q 004208 24 GRERLTSSFDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIG--NY---KGTTIPFEKKLNPEWNQVFAFTKERL- 97 (768)
Q Consensus 24 ~~~~~~~~~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~--~~---~~~T~~~~~t~nP~Wne~f~f~~~~~- 97 (768)
|...+++.|+. ..+.|.|+|++|++|+..|..|.+||||++++. +. +++|+++++|.||+|||+|.|.+...
T Consensus 17 G~l~~~l~y~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 94 (153)
T 1w15_A 17 GELLVSLCYQS--TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCES 94 (153)
T ss_dssp CEEEEEEEEET--TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSS
T ss_pred cEEEEEEEEcC--CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHH
Confidence 34567777774 468999999999999999989999999999994 32 67999999999999999999997643
Q ss_pred -CCceEEEEEEEcCCC-CCceeEEEEEcCCC
Q 004208 98 -QAISVELLVKDKMIV-NGDFIGKIKIDMPD 126 (768)
Q Consensus 98 -~~~~L~i~V~d~~~~-~d~~lG~~~i~l~~ 126 (768)
....|.|+|||++.+ ++++||++.+++..
T Consensus 95 l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 95 LEEISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp STTEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred hCceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 357899999999998 89999999999987
No 64
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.67 E-value=3.3e-16 Score=144.46 Aligned_cols=102 Identities=23% Similarity=0.351 Sum_probs=84.7
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC-----eeeeeccccCCCCCccccEEEEEEeCCC---cEEEEEE
Q 004208 359 VIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN-----KWVRTRTVVDSFDPKWNEQYTWEVYDPY---TVITLVV 430 (768)
Q Consensus 359 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~-----~~~~T~~~~~t~nP~wne~~~~~v~~~~---~~l~v~v 430 (768)
..|.|.|.|++|+||+.+ +..|.+||||++++++ ..++|++++++.||.|||.|.|.+.... ..|.|+|
T Consensus 14 ~~~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V 90 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAM---DIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITV 90 (138)
T ss_dssp TTTEEEEEEEEEESCCCC---BTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEE
T ss_pred CCCeEEEEEEEeeCCCCc---CCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEE
Confidence 446799999999999985 6678999999999964 4689999999999999999999987543 5899999
Q ss_pred EeCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeee
Q 004208 431 FDNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLV 469 (768)
Q Consensus 431 ~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 469 (768)
||++.++ +|++||.+.|+|.++..+. .+|++|.
T Consensus 91 ~d~~~~~----~~~~lG~~~i~l~~~~~~~--~~W~~l~ 123 (138)
T 3n5a_A 91 MDKDKLS----RNDVIGKIYLSWKSGPGEV--KHWKDMI 123 (138)
T ss_dssp EECCSSS----CCEEEEEEEESSSSCHHHH--HHHHHHH
T ss_pred EECCCCC----CCcEEEEEEEccccCChHH--HHHHHHH
Confidence 9999865 8999999999999765322 3444443
No 65
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.67 E-value=2.3e-16 Score=146.23 Aligned_cols=105 Identities=25% Similarity=0.395 Sum_probs=90.6
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC-----eeeeeccccCCCCCccccEEEEE-EeCC---CcEEEEE
Q 004208 359 VIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN-----KWVRTRTVVDSFDPKWNEQYTWE-VYDP---YTVITLV 429 (768)
Q Consensus 359 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~-----~~~~T~~~~~t~nP~wne~~~~~-v~~~---~~~l~v~ 429 (768)
..+.|+|+|++|+||+.+ +..|.+||||++++++ ..+||+++++++||.|||.|.|. +... ...|.|+
T Consensus 27 ~~~~L~V~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 103 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPM---DSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRIS 103 (142)
T ss_dssp GGTEEEEEEEEEESCCCC---CTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEE
T ss_pred CCCEEEEEEEEecCCCCC---CCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEE
Confidence 446799999999999985 6678999999999975 67999999999999999999998 5432 3589999
Q ss_pred EEeCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeee
Q 004208 430 VFDNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVA 470 (768)
Q Consensus 430 v~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~ 470 (768)
|||++.++ +|++||.+.|+|.++..++....|++|..
T Consensus 104 V~d~d~~~----~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 104 VCDEDKFG----HNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEECTTS----CEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred EEECCCCC----CCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99999865 78999999999999998887777887753
No 66
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=3e-16 Score=146.40 Aligned_cols=123 Identities=17% Similarity=0.198 Sum_probs=99.9
Q ss_pred cccceEEEEEecCCCcccccCcccccCccccccccCCCCeeeEEEEEEEEecCCCCC-CCC---CCCCCcCcEEEEEec-
Q 004208 320 RFASRICLRFSLDGGYHVFDEATNYSSDLRSTMKQLWPPVIGVLELGILSAKELLPM-KSR---DGRGTTDAYCVAKYA- 394 (768)
Q Consensus 320 ~~~g~i~l~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~l~v~v~~a~~L~~~-~~~---~~~g~~dpyv~v~~g- 394 (768)
...|+|++.+.+. +..|.|+|+|++|+||+.. +.. +..|.+||||+++++
T Consensus 10 ~~~G~l~~~l~y~-------------------------~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~ 64 (147)
T 2enp_A 10 YQLGMLHFSTQYD-------------------------LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLP 64 (147)
T ss_dssp CCCCEEEEEEEEE-------------------------TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEET
T ss_pred CcceEEEEEEEEc-------------------------CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEe
Confidence 4568888888752 3346799999999999973 211 224689999999996
Q ss_pred --CeeeeeccccCCCCCccccEEEEEEeCC---CcEEEEEEEeCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeee
Q 004208 395 --NKWVRTRTVVDSFDPKWNEQYTWEVYDP---YTVITLVVFDNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLV 469 (768)
Q Consensus 395 --~~~~~T~~~~~t~nP~wne~~~~~v~~~---~~~l~v~v~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~ 469 (768)
.+.+||+++++++||.|||.|.|.+... ...|.|+|||++.++ +|++||.+.|+|.++..+.....||+|.
T Consensus 65 ~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~----~~~~iG~~~i~l~~l~~~~~~~~w~~L~ 140 (147)
T 2enp_A 65 DQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFS----RHCVIGKVSVPLCEVDLVKGGHWWKALI 140 (147)
T ss_dssp CCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTC----CSCCCEEEEEETTTSCTTTCCCEEECCB
T ss_pred CCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCc----CCcEEEEEEEechhcCCCCCccEEEEee
Confidence 3578999999999999999999998742 358999999999865 7899999999999998776667899986
Q ss_pred ec
Q 004208 470 AL 471 (768)
Q Consensus 470 ~~ 471 (768)
..
T Consensus 141 ~~ 142 (147)
T 2enp_A 141 PS 142 (147)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 67
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.66 E-value=1.9e-16 Score=151.53 Aligned_cols=104 Identities=20% Similarity=0.350 Sum_probs=91.3
Q ss_pred eEEEEEEEEecCCCCCCCCCC-CCCcCcEEEEEecC-----eeeeeccccCCCCCccccEEEEEEeCCCcEEEEEEE-eC
Q 004208 361 GVLELGILSAKELLPMKSRDG-RGTTDAYCVAKYAN-----KWVRTRTVVDSFDPKWNEQYTWEVYDPYTVITLVVF-DN 433 (768)
Q Consensus 361 g~l~v~v~~a~~L~~~~~~~~-~g~~dpyv~v~~g~-----~~~~T~~~~~t~nP~wne~~~~~v~~~~~~l~v~v~-d~ 433 (768)
|.|.|+|++|+||+++ |. .|.+||||++++++ ..+||+++++++||+|||+|.|.+......|.|+|| |+
T Consensus 30 ~~L~V~v~~a~~L~~~---d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQK---PGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDY 106 (171)
T ss_dssp TEEEEEEEEEESCCCC---C---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCC---CcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcC
Confidence 4699999999999985 54 68999999999954 378999999999999999999998766679999999 99
Q ss_pred CCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeec
Q 004208 434 CHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVAL 471 (768)
Q Consensus 434 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 471 (768)
+.++ +|++||.+.|+|.++..+....+||+|...
T Consensus 107 d~~~----~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 107 GRMD----HKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp STTC----SSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCC----CCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9865 889999999999999988788999999765
No 68
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.66 E-value=3.3e-16 Score=146.42 Aligned_cols=103 Identities=23% Similarity=0.427 Sum_probs=90.8
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEec-----CeeeeeccccCCCCCccccEEEEEEeCC--CcEEEEEEEeC
Q 004208 361 GVLELGILSAKELLPMKSRDGRGTTDAYCVAKYA-----NKWVRTRTVVDSFDPKWNEQYTWEVYDP--YTVITLVVFDN 433 (768)
Q Consensus 361 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g-----~~~~~T~~~~~t~nP~wne~~~~~v~~~--~~~l~v~v~d~ 433 (768)
+.|+|+|++|+||+.+ +..|.+||||+++++ ...+||+++++++||.|||+|.|.+... ...|.|+|||+
T Consensus 31 ~~L~v~v~~a~~L~~~---d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 107 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPM---DPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDW 107 (149)
T ss_dssp SEEEEEEEEEESCCCC---STTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCC---CCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEEC
Confidence 4699999999999985 677899999999996 3579999999999999999999999763 45899999999
Q ss_pred CCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeec
Q 004208 434 CHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVAL 471 (768)
Q Consensus 434 ~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 471 (768)
+.++ +|++||.+.|+|.++..+. ..+||+|...
T Consensus 108 d~~~----~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 140 (149)
T 1a25_A 108 DLTS----RNDFMGSLSFGISELQKAG-VDGWFKLLSQ 140 (149)
T ss_dssp CSSS----CCEEEEEEEEEHHHHTTCC-EEEEEECBCH
T ss_pred CCCC----CCCEEEEEEEEHHHhCcCc-cCCeEEccCC
Confidence 9865 8999999999999998764 6899999754
No 69
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.65 E-value=2.9e-16 Score=142.84 Aligned_cols=87 Identities=22% Similarity=0.344 Sum_probs=73.3
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeEeeee-cCCCCCeeeeEEEEEeccCCCceEEEEEEEcCCC-CC
Q 004208 37 QMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGNYKGTTIPF-EKKLNPEWNQVFAFTKERLQAISVELLVKDKMIV-NG 114 (768)
Q Consensus 37 ~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~-~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~~~~-~d 114 (768)
.++.|.|+|++|++|.. .|.+||||+++ ++..+|+++ .+|.||+|||+|.|.+.+. ...|.|+|||+| . +|
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~d 75 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWD 75 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-SSCE
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-CCCC
Confidence 36899999999998852 67899999999 333455554 4799999999999999865 567999999999 6 99
Q ss_pred ceeEEEEEcCCCCCCC
Q 004208 115 DFIGKIKIDMPDIPKR 130 (768)
Q Consensus 115 ~~lG~~~i~l~~l~~~ 130 (768)
++||++.|+|.++...
T Consensus 76 d~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 76 TMVGTVWIPLRTIRQS 91 (131)
T ss_dssp EEEEEEEEEGGGSCBC
T ss_pred CeEEEEEEEHHHhhhc
Confidence 9999999999998654
No 70
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.64 E-value=1.1e-15 Score=145.59 Aligned_cols=109 Identities=23% Similarity=0.303 Sum_probs=89.6
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEEeeecccCCCCCCcccceEEEEecCC--CCCcEEEEEEecc
Q 004208 200 WYLRVNVIEAQDLVPKQRNRNPEVFIKAIFGN-----VVLKTTVSAKKTVNPTWNEDLMFVAAEP--FDDPLILTVEDKL 272 (768)
Q Consensus 200 ~~L~V~v~~a~~L~~~d~~~~~dpyV~v~lg~-----~~~~T~~i~~~t~nP~wne~f~f~~~~~--~~~~L~i~V~d~d 272 (768)
+.|.|+|++|++|+.+|.++.+||||++++++ +.++|+++++ ++||+|||+|.|.+... ....|.|+|||++
T Consensus 37 ~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 115 (166)
T 2cm5_A 37 GGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKK-TLNPEFNEEFFYDIKHSDLAKKSLDISVWDYD 115 (166)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCS-CSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccC-CCCCcccceEEEEcchHhcCCCEEEEEEEECC
Confidence 46999999999999999999999999999964 6889999997 99999999999998643 3568999999999
Q ss_pred CCCCCceeEEEEEecccccccc--------CCCCCCceeEEcccC
Q 004208 273 GDNKEECLGRLVLPLSKAGKRF--------LPLPAAAIWYNLERN 309 (768)
Q Consensus 273 ~~~~d~~lG~~~i~l~~l~~~~--------~~~~~~~~w~~L~~~ 309 (768)
..+++++||++.+++.++.... .++....+|+.|.+.
T Consensus 116 ~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~~~ 160 (166)
T 2cm5_A 116 IGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNE 160 (166)
T ss_dssp SSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECBC-
T ss_pred CCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECCCc
Confidence 9989999999999998864210 123445566666654
No 71
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.64 E-value=1.7e-15 Score=142.34 Aligned_cols=89 Identities=25% Similarity=0.255 Sum_probs=74.0
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe---EEeeecccCCCCCCcccceEEEEecCCC--CCcEEEEEEecc
Q 004208 200 WYLRVNVIEAQDLVPKQRNRNPEVFIKAIF--GNV---VLKTTVSAKKTVNPTWNEDLMFVAAEPF--DDPLILTVEDKL 272 (768)
Q Consensus 200 ~~L~V~v~~a~~L~~~d~~~~~dpyV~v~l--g~~---~~~T~~i~~~t~nP~wne~f~f~~~~~~--~~~L~i~V~d~d 272 (768)
+.|.|+|++|++|+..+..+.+||||++++ ++. +++|+++++ ++||+|||+|.|.+.... ...|.|+|||++
T Consensus 30 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d 108 (153)
T 1w15_A 30 NTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKC-TPNAVFNELFVFDIPCESLEEISVEFLVLDSE 108 (153)
T ss_dssp TEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCS-CSSEEEEEEEEEECCSSSSTTEEEEEEEEECC
T ss_pred CEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccC-CCCCeecceEEEECCHHHhCceEEEEEEEeCC
Confidence 469999999999999998899999999999 433 679999997 999999999999986542 357999999999
Q ss_pred CCCCCceeEEEEEeccc
Q 004208 273 GDNKEECLGRLVLPLSK 289 (768)
Q Consensus 273 ~~~~d~~lG~~~i~l~~ 289 (768)
..+++++||++.+++++
T Consensus 109 ~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 109 RGSRNEVIGRLVLGATA 125 (153)
T ss_dssp TTSCCEEEEEEEESTTC
T ss_pred CCCCCcEEEEEEECCCC
Confidence 98899999999999987
No 72
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.61 E-value=3.2e-15 Score=135.84 Aligned_cols=117 Identities=21% Similarity=0.319 Sum_probs=85.2
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecCeeeeecccc-CCCCCccccEEEEEEeCCCcEEEEEEEeCCCCC
Q 004208 359 VIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYANKWVRTRTVV-DSFDPKWNEQYTWEVYDPYTVITLVVFDNCHLH 437 (768)
Q Consensus 359 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~~~~~T~~~~-~t~nP~wne~~~~~v~~~~~~l~v~v~d~~~~~ 437 (768)
.+|.|.|+|++|++|.. .|.+||||+++ .+..+|++++ ++.||.|||.|.|.+.++...|.|+|||++ ++
T Consensus 3 ~~~~L~V~V~~A~~l~~------~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~ 73 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI 73 (131)
T ss_dssp CCEEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SS
T ss_pred cceEEEEEEEEeECCCC------CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CC
Confidence 35789999999998842 46899999999 4456677665 699999999999999987779999999999 65
Q ss_pred CCCCCCCceEEEEEeccccccCc------eeeeeEeeeecCC--CCc--ccccEEEEEEEE
Q 004208 438 PGGAKDSRIGKVRIRLSTLETDR------IYTHSYPLVALLP--NGV--KKMGEVQLAVRF 488 (768)
Q Consensus 438 ~~~~~d~~lG~~~i~l~~l~~~~------~~~~~~~L~~~~~--~g~--~~~G~i~l~~~~ 488 (768)
+|++||++.|+|+++.... +...||++..... .|. ...+.+.+.++|
T Consensus 74 ----~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 74 ----WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp ----CEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred ----CCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 7999999999999986432 3334444332211 111 123557777776
No 73
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.60 E-value=4.9e-15 Score=140.24 Aligned_cols=120 Identities=20% Similarity=0.302 Sum_probs=92.9
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecCeeeeecccc-CCCCCccccEEEEEEeCCCcEEEEEEEeCCCCC
Q 004208 359 VIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYANKWVRTRTVV-DSFDPKWNEQYTWEVYDPYTVITLVVFDNCHLH 437 (768)
Q Consensus 359 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~~~~~T~~~~-~t~nP~wne~~~~~v~~~~~~l~v~v~d~~~~~ 437 (768)
.+|.|+|+|++|++|.. .|++||||+++ .+..||++++ ++.||.|||.|.|.+.+....|.|+|||++ ++
T Consensus 12 ~~~~L~V~V~~A~~l~~------~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~ 82 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDGA------QEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI 82 (167)
T ss_dssp CCCEEEEEEEEEECSSC------GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SS
T ss_pred ceEEEEEEEEEEECCCC------CCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CC
Confidence 46789999999998832 47899999999 4456787775 699999999999999987779999999999 65
Q ss_pred CCCCCCCceEEEEEeccccccC------ceeeeeEeeeecCCC--C--cccccEEEEEEEEEec
Q 004208 438 PGGAKDSRIGKVRIRLSTLETD------RIYTHSYPLVALLPN--G--VKKMGEVQLAVRFTCS 491 (768)
Q Consensus 438 ~~~~~d~~lG~~~i~l~~l~~~------~~~~~~~~L~~~~~~--g--~~~~G~i~l~~~~~~~ 491 (768)
+|++||++.|+|.++... .+...||.+.....+ | ....|++.++++++..
T Consensus 83 ----~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~~ 142 (167)
T 2cjs_A 83 ----WDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFELP 142 (167)
T ss_dssp ----CCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECC
T ss_pred ----CCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeecC
Confidence 799999999999998643 244556665433211 1 1235678888888654
No 74
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.60 E-value=2.8e-15 Score=141.92 Aligned_cols=119 Identities=17% Similarity=0.246 Sum_probs=87.6
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeEeeeec-CCCCCeeeeEEEEEeccCCCceEEEEEEEcCCC-CCc
Q 004208 38 MEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGNYKGTTIPFE-KKLNPEWNQVFAFTKERLQAISVELLVKDKMIV-NGD 115 (768)
Q Consensus 38 ~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~-~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~~~~-~d~ 115 (768)
++.|.|+|++|++|. ..|.+||||+++ ++..+|++++ ++.||+|||+|.|.+.+. ...|.|+|||+| . +|+
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~dd 85 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIWDT 85 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-SSCCE
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-CCCCc
Confidence 679999999999884 368899999999 3345566654 699999999999999875 567999999999 6 999
Q ss_pred eeEEEEEcCCCCCCCCCCCC-CCCCeEEEcccCCCC------ccceEEEEEEEEc
Q 004208 116 FIGKIKIDMPDIPKRVPPDS-PLAPEWKRLEAKDGS------RARGELMFAIWFG 163 (768)
Q Consensus 116 ~lG~~~i~l~~l~~~~~~~~-~~~~~w~~L~~~~~~------~~~G~i~l~i~~~ 163 (768)
+||++.|+|.++........ ...+.|+.+..+.+. ...|.+++.+++.
T Consensus 86 ~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 86 MVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp EEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred eEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 99999999999865431110 122344554443332 1235577777764
No 75
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.58 E-value=5.9e-15 Score=131.35 Aligned_cols=116 Identities=12% Similarity=0.185 Sum_probs=99.6
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeEeeeec-CCCCCeeeeEEEEEecc--CCCceEEEEEEEcCCC-CCc
Q 004208 40 FLYVRIVRARDLQVNQVTGTCDPYVEVKIGNYKGTTIPFE-KKLNPEWNQVFAFTKER--LQAISVELLVKDKMIV-NGD 115 (768)
Q Consensus 40 ~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~-~t~nP~Wne~f~f~~~~--~~~~~L~i~V~d~~~~-~d~ 115 (768)
-|+|+|.+|.+|+ |.+|||+++.+.+.+++|++++ ++.||+|||.|.|++.. ..+..|.|.|||++.+ +++
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nr 96 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNK 96 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCE
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCC
Confidence 5999999999998 5789999999999999999998 69999999999999753 3468999999999999 999
Q ss_pred eeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCccceEEEEEEEEccc
Q 004208 116 FIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSRARGELMFAIWFGTQ 165 (768)
Q Consensus 116 ~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~i~~~~~ 165 (768)
+||++.++|.++..... ...+-+|.+.++....++|.+++.|.+.
T Consensus 97 lIG~~~i~Lq~lv~~~~-----l~l~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 97 LIGTFRMVLQKVVEENR-----VEVSDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp EEEEEEEESHHHHHHSE-----EEEEEEEECTTSCEEEEEEEEEEEEEET
T ss_pred EEEEEEEEhHHhccCCe-----EEEeecccCCCCCccccEEEEEEEecCC
Confidence 99999999999876531 2346778887766566999999999753
No 76
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.58 E-value=7.7e-15 Score=163.56 Aligned_cols=110 Identities=20% Similarity=0.203 Sum_probs=95.2
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeEeeeecCCCCCeeeeEEEEEecc-CCCceEEEEEEEcCCC-CC
Q 004208 37 QMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGNYKGTTIPFEKKLNPEWNQVFAFTKER-LQAISVELLVKDKMIV-NG 114 (768)
Q Consensus 37 ~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~Wne~f~f~~~~-~~~~~L~i~V~d~~~~-~d 114 (768)
+++.|.|+|++|++|+. |..|.+||||+|++++++.+|+++++++||+|||+|.|.+.+ .....|.|+|||+|.. +|
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~d 470 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDD 470 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCC
T ss_pred cccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCC
Confidence 47899999999999998 989999999999999999999999999999999999998643 3478899999999998 88
Q ss_pred ceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCccceEEEEEEEEc
Q 004208 115 DFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSRARGELMFAIWFG 163 (768)
Q Consensus 115 ~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~i~~~ 163 (768)
|+||++.++|.. + ....|++|. .|+|.+++.+.
T Consensus 471 D~LG~~~~~L~~---g------~~~~~~~l~-------~G~l~~~~~~~ 503 (540)
T 3nsj_A 471 DLLGSCDRSPHS---G------FHEVTCELN-------HGRVKFSYHAK 503 (540)
T ss_dssp EEEEEEEECCCS---E------EEEEEEECS-------SSEEEEEEEEE
T ss_pred CEEEEEEEEeeC---C------cEEEEEEcC-------CeEEEEEEEEE
Confidence 999999999872 2 135788764 28888887653
No 77
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.56 E-value=6.3e-15 Score=167.08 Aligned_cols=121 Identities=23% Similarity=0.358 Sum_probs=104.5
Q ss_pred cccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeeeEeeeecCCCCCeeeeEEEEEeccCCCceEEEEEEEcCCC-CCc
Q 004208 37 QMEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGNYKGTTIPFEKKLNPEWNQVFAFTKERLQAISVELLVKDKMIV-NGD 115 (768)
Q Consensus 37 ~~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~~~~~T~~~~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~~~~-~d~ 115 (768)
+.+.|.|+|++|++|++.|..|.+||||++.+++++++|+++++|.||+|||+|.|.+.......|.|+|||+|.+ +|+
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d 464 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDD 464 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSCC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCCC
Confidence 4689999999999999999999999999999999999999999999999999999999877678899999999998 899
Q ss_pred eeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCccceEEEEEEEE
Q 004208 116 FIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSRARGELMFAIWF 162 (768)
Q Consensus 116 ~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~i~~ 162 (768)
+||++.+++.++..+..... ....|++|... ..|+|.+.+.+
T Consensus 465 ~lG~~~~~l~~l~~~~~~~~-~~~~~~~l~~~----~~G~i~l~~~l 506 (510)
T 3jzy_A 465 FLGRTEIPVAKIRTEQESKG-PMTRRLLLHEV----PTGEVWVRFDL 506 (510)
T ss_dssp EEEEEEEEHHHHHHHHHHHC-SCCEEEECBSS----SSCEEEEEEEE
T ss_pred ceEEEEEEHHHhccccCCCC-ceeeeecCCCC----CCceEEEEEEE
Confidence 99999999999865422111 24689998865 34888887765
No 78
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.55 E-value=4.8e-14 Score=157.19 Aligned_cols=113 Identities=19% Similarity=0.258 Sum_probs=98.1
Q ss_pred CeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecCeeeeeccccCCCCCccccEEEEEEeC--CCcEEEEEEEeCCC
Q 004208 358 PVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYANKWVRTRTVVDSFDPKWNEQYTWEVYD--PYTVITLVVFDNCH 435 (768)
Q Consensus 358 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~~~~~T~~~~~t~nP~wne~~~~~v~~--~~~~l~v~v~d~~~ 435 (768)
..+|.|+|.|++|+||+. |..|++||||+++++++.+||+++++++||+|||.|.|.+.+ ..+.|.|+|||+|.
T Consensus 391 ~~~~~L~V~V~~A~~L~~----D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG----DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY 466 (540)
T ss_dssp TTEEEEEEEEEEEESCCC----SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS
T ss_pred CcccEEEEEEEEccCCCc----ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC
Confidence 457899999999999986 577899999999999999999999999999999999999754 56789999999998
Q ss_pred CCCCCCCCCceEEEEEeccccccCceeeeeEeeeecCCCCcccccEEEEEEEEEec
Q 004208 436 LHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVALLPNGVKKMGEVQLAVRFTCS 491 (768)
Q Consensus 436 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~~ 491 (768)
.+ +||+||.+.++|.. | ....|++| ..|.|++++.+++.
T Consensus 467 ~~----~dD~LG~~~~~L~~---g-~~~~~~~l---------~~G~l~~~~~~~c~ 505 (540)
T 3nsj_A 467 GW----DDDLLGSCDRSPHS---G-FHEVTCEL---------NHGRVKFSYHAKCL 505 (540)
T ss_dssp SS----CCEEEEEEEECCCS---E-EEEEEEEC---------SSSEEEEEEEEEEC
T ss_pred CC----CCCEEEEEEEEeeC---C-cEEEEEEc---------CCeEEEEEEEEEEC
Confidence 65 88999999999983 3 34677776 24999999999876
No 79
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.54 E-value=2.2e-14 Score=162.53 Aligned_cols=119 Identities=27% Similarity=0.481 Sum_probs=103.3
Q ss_pred CeeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecCeeeeeccccCCCCCccccEEEEEEeCCC-cEEEEEEEeCCCC
Q 004208 358 PVIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYANKWVRTRTVVDSFDPKWNEQYTWEVYDPY-TVITLVVFDNCHL 436 (768)
Q Consensus 358 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~~~~~T~~~~~t~nP~wne~~~~~v~~~~-~~l~v~v~d~~~~ 436 (768)
...|.|+|+|++|+||++. |..|.+||||+++++++.++|+++++++||.|||.|.|.+..+. ..|.|+|||+|.+
T Consensus 384 ~~~~~l~v~v~~a~~L~~~---d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKAC---KPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCC---STTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCC---CCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 5678999999999999885 67899999999999999999999999999999999999998765 5899999999986
Q ss_pred CCCCCCCCceEEEEEeccccccCce----eeeeEeeeecCCCCcccccEEEEEEEEE
Q 004208 437 HPGGAKDSRIGKVRIRLSTLETDRI----YTHSYPLVALLPNGVKKMGEVQLAVRFT 489 (768)
Q Consensus 437 ~~~~~~d~~lG~~~i~l~~l~~~~~----~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 489 (768)
+ +|++||.+.++|.++..+.. ...|++|.+. ..|+|++++.+.
T Consensus 461 ~----~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~------~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 S----PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV------PTGEVWVRFDLQ 507 (510)
T ss_dssp S----SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS------SSCEEEEEEEEE
T ss_pred C----CCCceEEEEEEHHHhccccCCCCceeeeecCCCC------CCceEEEEEEEE
Confidence 5 89999999999999987643 6789988532 459999988874
No 80
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.52 E-value=8.4e-14 Score=123.96 Aligned_cols=116 Identities=16% Similarity=0.272 Sum_probs=99.6
Q ss_pred EEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecCeeeeecccc-CCCCCccccEEEEEEeC---CCcEEEEEEEeCCCCC
Q 004208 362 VLELGILSAKELLPMKSRDGRGTTDAYCVAKYANKWVRTRTVV-DSFDPKWNEQYTWEVYD---PYTVITLVVFDNCHLH 437 (768)
Q Consensus 362 ~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~~~~~T~~~~-~t~nP~wne~~~~~v~~---~~~~l~v~v~d~~~~~ 437 (768)
.|+|.|.+|.||+ |++|||+++.+-+.+++|+++. .+.||.|||.|+|++.. ..+.|.|+|+|++.++
T Consensus 22 sL~V~l~~a~~Lp--------g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~ 93 (144)
T 3l9b_A 22 ALIVHLKTVSELR--------GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVF 93 (144)
T ss_dssp EEEEEEEEEESCC--------SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTS
T ss_pred EEEEEEEEecCCC--------CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcccc
Confidence 4999999999997 3799999999999999999998 59999999999999984 4569999999999987
Q ss_pred CCCCCCCceEEEEEeccccccCceeeeeEeeeecCCCCcccccEEEEEEEEEec
Q 004208 438 PGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVALLPNGVKKMGEVQLAVRFTCS 491 (768)
Q Consensus 438 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~~ 491 (768)
++.+||++.|+|.++..+.....+-+|.+.+. ..-.++|.|.++|.+.
T Consensus 94 ----~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~--~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 94 ----SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNN--AIIKTSLSMEVRYQAA 141 (144)
T ss_dssp ----CCEEEEEEEEESHHHHHHSEEEEEEEEECTTS--CEEEEEEEEEEEEEET
T ss_pred ----CCCEEEEEEEEhHHhccCCeEEEeecccCCCC--CccccEEEEEEEecCC
Confidence 89999999999999998776666778876643 2234889999998643
No 81
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.50 E-value=1.1e-13 Score=157.97 Aligned_cols=119 Identities=25% Similarity=0.345 Sum_probs=103.0
Q ss_pred cccEEEEEEEEeecCCCCCC--CCCCCcEEEEEECC-----eeeEeeeecCC-CCCeeeeEEEEEeccCCCceEEEEEEE
Q 004208 37 QMEFLYVRIVRARDLQVNQV--TGTCDPYVEVKIGN-----YKGTTIPFEKK-LNPEWNQVFAFTKERLQAISVELLVKD 108 (768)
Q Consensus 37 ~~~~L~V~i~~a~~L~~~d~--~g~~dPyv~v~~~~-----~~~~T~~~~~t-~nP~Wne~f~f~~~~~~~~~L~i~V~d 108 (768)
..+.|.|+|++|++|+..+. .|.+||||+|.+.+ .+.+|++++++ .||+|||+|.|.+.......|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 45789999999999998874 68999999999955 67899999997 999999999999876655789999999
Q ss_pred cCCC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCc-cceEEEEEEEEc
Q 004208 109 KMIV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSR-ARGELMFAIWFG 163 (768)
Q Consensus 109 ~~~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~-~~G~i~l~i~~~ 163 (768)
+|.+ +|++||++.++|..|..+ ..|++|.+..|.. ..|.|.+.+.+.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G--------~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG--------YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE--------EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCC--------cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 9988 999999999999999654 4799999887764 468888887763
No 82
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.45 E-value=1.2e-13 Score=158.65 Aligned_cols=106 Identities=22% Similarity=0.296 Sum_probs=94.9
Q ss_pred cccEEEEEEEEeecCCC---CCCCCCCCcEEEEEECC---eeeEeeeecCCCCCeeeeEEEEEeccCCCceEEEEEEEcC
Q 004208 37 QMEFLYVRIVRARDLQV---NQVTGTCDPYVEVKIGN---YKGTTIPFEKKLNPEWNQVFAFTKERLQAISVELLVKDKM 110 (768)
Q Consensus 37 ~~~~L~V~i~~a~~L~~---~d~~g~~dPyv~v~~~~---~~~~T~~~~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~~ 110 (768)
+.+.|.|+|++|++|+. +|..|.+||||+|++++ .+++|+++++|.||+|||+|.|.+.......|.|+|||+|
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D 95 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 95 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECC
Confidence 57899999999999998 78889999999999985 6789999999999999999999998766789999999999
Q ss_pred CCCCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccC
Q 004208 111 IVNGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAK 147 (768)
Q Consensus 111 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~ 147 (768)
.+.|++||++.++|.++..+. ....|++|.+.
T Consensus 96 ~~~ddfIG~v~I~L~~L~~g~-----~~~~w~~L~~~ 127 (749)
T 1cjy_A 96 YVMDETLGTATFTVSSMKVGE-----KKEVPFIFNQV 127 (749)
T ss_dssp SSSCEEEEEECCBSTTSCTTC-----CCCEEEEETTT
T ss_pred CCCCceeEEEEEEHHHcCCCC-----ceEEEEecCCC
Confidence 877999999999999997653 24799999754
No 83
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.43 E-value=8.3e-13 Score=150.74 Aligned_cols=122 Identities=16% Similarity=0.287 Sum_probs=100.3
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC-----eeeeeccccCC-CCCccccEEEEEEeCCC-cEEEEEEE
Q 004208 359 VIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN-----KWVRTRTVVDS-FDPKWNEQYTWEVYDPY-TVITLVVF 431 (768)
Q Consensus 359 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~-----~~~~T~~~~~t-~nP~wne~~~~~v~~~~-~~l~v~v~ 431 (768)
..+.|+|+|++|++|+.++. ...|.+||||+|++.+ ...||++++++ .||.|||+|.|.+..+. ..|.|+||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~-~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNK-NKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSS-CSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccc-cccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 56889999999999998631 1367899999999944 57899999997 99999999999998764 58999999
Q ss_pred eCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeecCCCCcccccEEEEEEEEE
Q 004208 432 DNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVALLPNGVKKMGEVQLAVRFT 489 (768)
Q Consensus 432 d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 489 (768)
|++.++ +|++||++.|||..|..|. +|+||.+...... ..|.|.+.+.++
T Consensus 574 D~D~~~----~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~-~~~~L~v~i~~~ 623 (624)
T 1djx_A 574 DYDSSS----KNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQH-PSATLFVKISIQ 623 (624)
T ss_dssp ECCSSS----CCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEE-EEEEEEEEEEEE
T ss_pred EcCCCC----CCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCC-CceEEEEEEEEE
Confidence 999865 8999999999999998864 6999977642211 347888888773
No 84
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.42 E-value=1.7e-14 Score=160.78 Aligned_cols=121 Identities=23% Similarity=0.354 Sum_probs=21.1
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecCe-eeeeccccCC---CCCccccEEEEEEeCCCcEEEEEEEeC-
Q 004208 359 VIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYANK-WVRTRTVVDS---FDPKWNEQYTWEVYDPYTVITLVVFDN- 433 (768)
Q Consensus 359 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~~-~~~T~~~~~t---~nP~wne~~~~~v~~~~~~l~v~v~d~- 433 (768)
..|.|+|+|++|+||+++ + ||||+++++++ +.||+++++| +||.|||+|+|.+......|.|+|||+
T Consensus 9 ~~~~L~V~VieAk~L~~~---d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~ 80 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPK---K-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDS 80 (483)
T ss_dssp EEECC-----------------------------------------------------CCEECC----------------
T ss_pred eccEEEEEEEEcCCcCCC---C-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecC
Confidence 456799999999999884 3 99999999876 6799999999 999999999999765567999999995
Q ss_pred C---CCCCCCCCCCceEEEEEeccccccCceeeeeEeeeecCC---------------------CCcccccEEEEEEEEE
Q 004208 434 C---HLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVALLP---------------------NGVKKMGEVQLAVRFT 489 (768)
Q Consensus 434 ~---~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~---------------------~g~~~~G~i~l~~~~~ 489 (768)
+ .++ +|++||++.|++.++..++....||+|...+. ++.+..|.|+|+++|.
T Consensus 81 d~~~~~~----~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~ 156 (483)
T 3bxj_A 81 DKKRKKD----KAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQ 156 (483)
T ss_dssp ------------------------------CCEECC--------------------------------------CEEEEE
T ss_pred CccccCC----CCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEee
Confidence 3 223 79999999999999998888899999975543 1223469999999996
Q ss_pred ec
Q 004208 490 CS 491 (768)
Q Consensus 490 ~~ 491 (768)
..
T Consensus 157 ~~ 158 (483)
T 3bxj_A 157 TM 158 (483)
T ss_dssp EC
T ss_pred ee
Confidence 54
No 85
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.33 E-value=1.8e-12 Score=148.83 Aligned_cols=107 Identities=17% Similarity=0.237 Sum_probs=94.9
Q ss_pred CCeeEEEEEEEEeecCCC---CCCCCCCCcEEEEEEC---CeEEeeecccCCCCCCcccceEEEEecCCCCCcEEEEEEe
Q 004208 197 PKLWYLRVNVIEAQDLVP---KQRNRNPEVFIKAIFG---NVVLKTTVSAKKTVNPTWNEDLMFVAAEPFDDPLILTVED 270 (768)
Q Consensus 197 p~~~~L~V~v~~a~~L~~---~d~~~~~dpyV~v~lg---~~~~~T~~i~~~t~nP~wne~f~f~~~~~~~~~L~i~V~d 270 (768)
+..+.|+|+|++|++|+. +|..|.+||||++.++ .++++|+++++ ++||+|||+|.|.+..+....|.|+|||
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~-tlNPvWNEtF~F~v~~~~~~~L~~~V~D 93 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNN-DINPVWNETFEFILDPNQENVLEITLMD 93 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTT-CSSCEEEEEEEEEECTTSCCBCEEEEEE
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcC-CCCCeeeeEEEEEecCCCCCEEEEEEEE
Confidence 345789999999999998 7888899999999997 46889999997 9999999999999988777899999999
Q ss_pred ccCCCCCceeEEEEEeccccccccCCCCCCceeEEcccC
Q 004208 271 KLGDNKEECLGRLVLPLSKAGKRFLPLPAAAIWYNLERN 309 (768)
Q Consensus 271 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~~~ 309 (768)
+|..+ +++||++.++|.++.. +.....|++|.+.
T Consensus 94 ~D~~~-ddfIG~v~I~L~~L~~----g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 94 ANYVM-DETLGTATFTVSSMKV----GEKKEVPFIFNQV 127 (749)
T ss_dssp CCSSS-CEEEEEECCBSTTSCT----TCCCCEEEEETTT
T ss_pred CCCCC-CceeEEEEEEHHHcCC----CCceEEEEecCCC
Confidence 99988 9999999999999863 3446789999865
No 86
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.28 E-value=2.8e-13 Score=150.86 Aligned_cols=100 Identities=15% Similarity=0.288 Sum_probs=13.1
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe-eeEeeeecCC---CCCeeeeEEEEEeccCCCceEEEEEEEc-C--
Q 004208 38 MEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGNY-KGTTIPFEKK---LNPEWNQVFAFTKERLQAISVELLVKDK-M-- 110 (768)
Q Consensus 38 ~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~~-~~~T~~~~~t---~nP~Wne~f~f~~~~~~~~~L~i~V~d~-~-- 110 (768)
.+.|.|+|++|++|+++| ||||+++++++ ..||+++++| .||+|||+|.|.+... ...|.|+|||. |
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDSDKK 83 (483)
T ss_dssp EECC--------------------------------------------------CCEECC--------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecCCcc
Confidence 467999999999999876 99999999985 6799999999 9999999999986543 57899999995 4
Q ss_pred -CC-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCC
Q 004208 111 -IV-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKD 148 (768)
Q Consensus 111 -~~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 148 (768)
.. +|++||++.|++.++..+. ...+|++|.++.
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~~-----~~~~W~~L~~~~ 118 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGRH-----FTEQWYPVTLPT 118 (483)
T ss_dssp ----------------------------CCEECC------
T ss_pred ccCCCCceEEEEEEEHHHhcCCC-----CCCeEEECCCCC
Confidence 24 8999999999999997653 257899996543
No 87
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.17 E-value=9.3e-11 Score=136.82 Aligned_cols=111 Identities=19% Similarity=0.241 Sum_probs=93.1
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeEeeeecC-CCCCeeee-EEEEE-eccCCCceEEEEEEEc
Q 004208 39 EFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN------YKGTTIPFEK-KLNPEWNQ-VFAFT-KERLQAISVELLVKDK 109 (768)
Q Consensus 39 ~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~~~~~-t~nP~Wne-~f~f~-~~~~~~~~L~i~V~d~ 109 (768)
..|.|+|++|++|+.. .+||||+|.+.+ .+++|+++++ +.||+||| +|.|. +.......|+|+|||+
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 4799999999999753 589999999975 3579999876 59999999 69998 6554456899999999
Q ss_pred CCCCCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCc-cceEEEEEEEEcc
Q 004208 110 MIVNGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSR-ARGELMFAIWFGT 164 (768)
Q Consensus 110 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~-~~G~i~l~i~~~~ 164 (768)
| +++||++.++|..|..+ .++++|.+..|.. ..|.|.+.+.+..
T Consensus 801 d---ddfiG~~~lpL~~L~~G--------yR~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 801 G---GKFVGHRILPVSAIRSG--------YHYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp T---TEEEEEEEEETTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred C---ccEEeeEEEEHHHcCCC--------ceEEEecCCCCCccCceEEEEEEEEEe
Confidence 7 89999999999998764 5689999988764 5789999988764
No 88
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.16 E-value=1.5e-10 Score=134.38 Aligned_cols=112 Identities=20% Similarity=0.254 Sum_probs=93.8
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-------eeeEeeeecC-CCCCeeeeE-EEEE-eccCCCceEEEEEE
Q 004208 38 MEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN-------YKGTTIPFEK-KLNPEWNQV-FAFT-KERLQAISVELLVK 107 (768)
Q Consensus 38 ~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~-------~~~~T~~~~~-t~nP~Wne~-f~f~-~~~~~~~~L~i~V~ 107 (768)
.+.|.|+|++|++|+.+ .+||||+|.+.+ .+++|+++++ +.||+|||+ |.|. +....-..|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 36899999999999753 589999999976 5679999875 699999998 9998 65554578999999
Q ss_pred EcCCCCCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCc-cceEEEEEEEEcc
Q 004208 108 DKMIVNGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSR-ARGELMFAIWFGT 164 (768)
Q Consensus 108 d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~-~~G~i~l~i~~~~ 164 (768)
|++ +++||++.++|..|..+ -++++|.+..|.. ..++|.+.+.+..
T Consensus 725 D~d---ddfiG~~~ipL~~L~~G--------yR~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 725 EEN---GKFIGHRVMPLDGIKPG--------YRHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp ETT---SCEEEEEEEESTTCCCE--------EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred ecC---CCeeeEEEEEHHHcCCc--------ceEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 985 89999999999999765 5789999987765 3488998888764
No 89
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.13 E-value=5.6e-11 Score=138.63 Aligned_cols=105 Identities=27% Similarity=0.499 Sum_probs=91.4
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeeeEeeeecCCCCCeeeeEEEEEeccC-CCceEEEEEEEcCC
Q 004208 38 MEFLYVRIVRARDLQVNQVTGTCDPYVEVKI-----GNYKGTTIPFEKKLNPEWNQVFAFTKERL-QAISVELLVKDKMI 111 (768)
Q Consensus 38 ~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~-----~~~~~~T~~~~~t~nP~Wne~f~f~~~~~-~~~~L~i~V~d~~~ 111 (768)
.+.|.|+|++|++|..+|..|.+||||++++ +..+.+|+++++|.||+|||+|.|.+... ....|.|+|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 4789999999999999999999999999999 33578999999999999999999997533 24579999999999
Q ss_pred C-CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCC
Q 004208 112 V-NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKD 148 (768)
Q Consensus 112 ~-~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~ 148 (768)
. +|++||++.+++.++.... ...|+.|....
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~------~~~w~~Lls~~ 282 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAG------VDGWFKLLSQE 282 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCC------EEEEEECBCTT
T ss_pred ccccccccccccchhhhccCC------cccceeecccc
Confidence 9 9999999999999886542 47899987654
No 90
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.10 E-value=2.5e-10 Score=133.44 Aligned_cols=110 Identities=17% Similarity=0.238 Sum_probs=89.7
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eeeEee-eec-CCCCCeeee-EEEE-EeccCCCceEEEEEE
Q 004208 38 MEFLYVRIVRARDLQVNQVTGTCDPYVEVKIGN------YKGTTI-PFE-KKLNPEWNQ-VFAF-TKERLQAISVELLVK 107 (768)
Q Consensus 38 ~~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~------~~~~T~-~~~-~t~nP~Wne-~f~f-~~~~~~~~~L~i~V~ 107 (768)
.+.|.|+|++|++|+. +.+||||+|.+.| .+++|+ +++ ++.||+||| +|.| .+....-..|.|+||
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 5789999999999974 4689999999953 357899 776 469999999 7999 775544568999999
Q ss_pred EcCCCCCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCc-cceEEEEEEEE
Q 004208 108 DKMIVNGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSR-ARGELMFAIWF 162 (768)
Q Consensus 108 d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~-~~G~i~l~i~~ 162 (768)
|++ +++||++.++|..|..+ ..|++|.+..|.. ..+.|.+.+.+
T Consensus 753 D~d---~d~iG~~~ipl~~L~~G--------~r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 753 EEG---NKFLGHRIIPINALNSG--------YHHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp ETT---TEEEEEEEEEGGGBCCE--------EEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EeC---CCccceEeeehhhcCCC--------cEEEeccCCCCCCCCceEEEEEEEE
Confidence 997 89999999999998654 5789999877653 44777777765
No 91
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.07 E-value=1.8e-10 Score=134.27 Aligned_cols=104 Identities=23% Similarity=0.444 Sum_probs=91.1
Q ss_pred eeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEe-----cCeeeeeccccCCCCCccccEEEEEEeC--CCcEEEEEEEe
Q 004208 360 IGVLELGILSAKELLPMKSRDGRGTTDAYCVAKY-----ANKWVRTRTVVDSFDPKWNEQYTWEVYD--PYTVITLVVFD 432 (768)
Q Consensus 360 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~-----g~~~~~T~~~~~t~nP~wne~~~~~v~~--~~~~l~v~v~d 432 (768)
.+.|.|.|++|++|.++ |..|.+||||++++ +....+|+++++++||.|||.|.|.+.. ....|.|+|||
T Consensus 171 ~~~L~V~v~~a~~L~~~---d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d 247 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPM---DPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWD 247 (674)
T ss_dssp SSEEEEEEEEEESCCCC---STTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEE
T ss_pred cceeeeeeecccccCCC---CcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEee
Confidence 35699999999999996 67889999999999 4457999999999999999999999975 34579999999
Q ss_pred CCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeec
Q 004208 433 NCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVAL 471 (768)
Q Consensus 433 ~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~ 471 (768)
++.++ +|++||.+.++++++..+.. ..||+|...
T Consensus 248 ~d~~~----~dd~iG~~~i~l~~l~~~~~-~~w~~Lls~ 281 (674)
T 3pfq_A 248 WDLTS----RNDFMGSLSFGISELQKAGV-DGWFKLLSQ 281 (674)
T ss_dssp CCSSS----CCEECCBCCCBTTHHHHCCE-EEEEECBCT
T ss_pred ccccc----ccccccccccchhhhccCCc-ccceeeccc
Confidence 99865 89999999999999987653 899999764
No 92
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.04 E-value=1.2e-09 Score=126.90 Aligned_cols=110 Identities=20% Similarity=0.319 Sum_probs=88.9
Q ss_pred eeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC-------eeeeeccccC-CCCCccccE-EEEE-EeCCC-cEEEE
Q 004208 360 IGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN-------KWVRTRTVVD-SFDPKWNEQ-YTWE-VYDPY-TVITL 428 (768)
Q Consensus 360 ~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~-------~~~~T~~~~~-t~nP~wne~-~~~~-v~~~~-~~l~v 428 (768)
.+.|+|+|++|++|+. ..+||||+|++.+ +.+||+++++ ++||+|||+ |.|. |..+. ..|.+
T Consensus 649 ~~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf 721 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD-------KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRI 721 (816)
T ss_dssp CEEEEEEEEEEECCCS-------SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEE
T ss_pred ceEEEEEEEEcccCCC-------CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEE
Confidence 4789999999999975 2589999999954 5689999986 599999998 9998 76554 58999
Q ss_pred EEEeCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeecCCCCcc-cccEEEEEEEEE
Q 004208 429 VVFDNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVALLPNGVK-KMGEVQLAVRFT 489 (768)
Q Consensus 429 ~v~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~-~~G~i~l~~~~~ 489 (768)
.|||++ |++||++.|||+.|..|- ++.||.+.. |.. ..+.|.+.+.+.
T Consensus 722 ~V~D~d--------ddfiG~~~ipL~~L~~Gy---R~vpL~~~~--g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 722 IVSEEN--------GKFIGHRVMPLDGIKPGY---RHVPLRNES--NRPLGLASVFAHIVAK 770 (816)
T ss_dssp EEEETT--------SCEEEEEEEESTTCCCEE---EEEEEECTT--SCEEEEEEEEEEEEEE
T ss_pred EEEecC--------CCeeeEEEEEHHHcCCcc---eEEEEeCCC--CCCCCceEEEEEEEEE
Confidence 999974 679999999999999874 578997754 322 237777777775
No 93
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.02 E-value=1.1e-09 Score=127.91 Aligned_cols=110 Identities=18% Similarity=0.298 Sum_probs=88.4
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC------eeeeeccccC-CCCCcccc-EEEEE-EeCCC-cEEEEEE
Q 004208 361 GVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN------KWVRTRTVVD-SFDPKWNE-QYTWE-VYDPY-TVITLVV 430 (768)
Q Consensus 361 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~------~~~~T~~~~~-t~nP~wne-~~~~~-v~~~~-~~l~v~v 430 (768)
..|+|.|++|++|+. ..+||||+|.+.+ ..+||+++++ ++||+||| .|.|. |..+. ..|.|+|
T Consensus 725 ~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V 797 (885)
T 3ohm_B 725 NALRVKVISGQFLSD-------RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAA 797 (885)
T ss_dssp EEEEEEEEEEESCCS-------SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEE
T ss_pred eEEEEEEEEeccCcc-------cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEE
Confidence 479999999999975 2589999999954 3589999986 59999999 69998 76553 5899999
Q ss_pred EeCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeecCCCCcccccEEEEEEEEE
Q 004208 431 FDNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVALLPNGVKKMGEVQLAVRFT 489 (768)
Q Consensus 431 ~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~~ 489 (768)
||++ |++||++.|||+.|..|- ++.||.+...... ..|.|.+.+.+.
T Consensus 798 ~D~d--------ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l-~~atLfv~i~~~ 844 (885)
T 3ohm_B 798 FEEG--------GKFVGHRILPVSAIRSGY---HYVCLRNEANQPL-CLPALLIYTEAS 844 (885)
T ss_dssp EETT--------TEEEEEEEEETTTCCCEE---EEEEEECTTSCEE-EEEEEEEEEEEE
T ss_pred EcCC--------ccEEeeEEEEHHHcCCCc---eEEEecCCCCCcc-CceEEEEEEEEE
Confidence 9975 679999999999998874 4688877642211 358888888886
No 94
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.00 E-value=1.7e-09 Score=126.44 Aligned_cols=111 Identities=17% Similarity=0.320 Sum_probs=87.5
Q ss_pred eeeEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEecC------eeeeec-cccC-CCCCcccc-EEEE-EEeCCC-cEEE
Q 004208 359 VIGVLELGILSAKELLPMKSRDGRGTTDAYCVAKYAN------KWVRTR-TVVD-SFDPKWNE-QYTW-EVYDPY-TVIT 427 (768)
Q Consensus 359 ~~g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~g~------~~~~T~-~~~~-t~nP~wne-~~~~-~v~~~~-~~l~ 427 (768)
..|.|.|.|++|++|+. +++||||+|.+.+ +.+||+ ++++ ++||+||| .|.| .|..+. ..|.
T Consensus 676 ~~~~L~V~Visa~~L~~-------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr 748 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE-------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLR 748 (799)
T ss_dssp TCEEEEEEEEEEESCCS-------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEE
T ss_pred eeeeEEEEEEeccccCc-------cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEE
Confidence 46789999999999975 3689999999932 358999 8875 68999999 6999 787654 4899
Q ss_pred EEEEeCCCCCCCCCCCCceEEEEEeccccccCceeeeeEeeeecCCCCcccccEEEEEEEE
Q 004208 428 LVVFDNCHLHPGGAKDSRIGKVRIRLSTLETDRIYTHSYPLVALLPNGVKKMGEVQLAVRF 488 (768)
Q Consensus 428 v~v~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~g~~~~G~i~l~~~~ 488 (768)
|.|||++ |++||.+.|||+.|..|. +++||.+...... ..+.|.+.+.+
T Consensus 749 ~~V~D~d--------~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~~-~~~~Lfv~i~~ 797 (799)
T 2zkm_X 749 VAVMEEG--------NKFLGHRIIPINALNSGY---HHLCLHSESNMPL-TMPALFIFLEM 797 (799)
T ss_dssp EEEEETT--------TEEEEEEEEEGGGBCCEE---EEEEEECTTCCEE-EEEEEEEEEEE
T ss_pred EEEEEeC--------CCccceEeeehhhcCCCc---EEEeccCCCCCCC-CceEEEEEEEE
Confidence 9999974 679999999999998764 6789976542211 24677777766
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.87 E-value=6.4e-09 Score=89.65 Aligned_cols=114 Identities=13% Similarity=0.305 Sum_probs=86.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe----eeEe-eeecCCCCCeeeeEEEEEeccCCCceEEEEEEEcCCCC
Q 004208 39 EFLYVRIVRARDLQVNQVTGTCDPYVEVKIGNY----KGTT-IPFEKKLNPEWNQVFAFTKERLQAISVELLVKDKMIVN 113 (768)
Q Consensus 39 ~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~~~~----~~~T-~~~~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~~~~~ 113 (768)
..|+|.+.++.--.........||||.|.+... +.+| .++++|..|+|||+|.-.+.+ ...|.|.|++...
T Consensus 6 ~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE-- 81 (126)
T ss_dssp CEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT--
T ss_pred ccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC--
Confidence 579999987764222223457899999999863 2365 778899999999999999887 6789999997654
Q ss_pred CceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCccceEEEEEEEEc
Q 004208 114 GDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSRARGELMFAIWFG 163 (768)
Q Consensus 114 d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~i~~~ 163 (768)
+|++.|++.+.+|..+-..+......|+.|++. |+|++.+.+.
T Consensus 82 -~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP~------Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 -EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQ------AKVLMSVQYF 124 (126)
T ss_dssp -EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBSS------CEEEEEEEEE
T ss_pred -CeeeEEEEEHHHHHhhhccCCCceEEEEecccC------cEEEEEEEEe
Confidence 999999999999964310001235789999863 9999888664
No 96
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.83 E-value=5.7e-09 Score=91.12 Aligned_cols=114 Identities=18% Similarity=0.408 Sum_probs=87.6
Q ss_pred cEEEEEEEEeecCCCCC-CCCCCCcEEEEEECCe----eeEe-eeecCCCCCeeeeEEEEEeccCCCceEEEEEEEcCCC
Q 004208 39 EFLYVRIVRARDLQVNQ-VTGTCDPYVEVKIGNY----KGTT-IPFEKKLNPEWNQVFAFTKERLQAISVELLVKDKMIV 112 (768)
Q Consensus 39 ~~L~V~i~~a~~L~~~d-~~g~~dPyv~v~~~~~----~~~T-~~~~~t~nP~Wne~f~f~~~~~~~~~L~i~V~d~~~~ 112 (768)
+.|+|.+.++.-.+... .....||||.|.+... ..+| .++++|..|+|||+|.-.+.+ ...|.|.|++...
T Consensus 10 ~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 86 (138)
T 2enj_A 10 PFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKNV- 86 (138)
T ss_dssp CCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSSC-
T ss_pred cceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCCC-
Confidence 57999998886544332 2346899999999863 3677 778889999999999998887 6789999996654
Q ss_pred CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCccceEEEEEEEEc
Q 004208 113 NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSRARGELMFAIWFG 163 (768)
Q Consensus 113 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~i~~~ 163 (768)
+|++.|+|.+.+|..+-..+......|+.|++. |+|++.+.+.
T Consensus 87 --~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP~------Gkl~v~i~~~ 129 (138)
T 2enj_A 87 --DLISETTVELYSLAERCRKNNGKTEIWLELKPQ------GRMLMNARYF 129 (138)
T ss_dssp --SCCEEEEEESHHHHHHHHHTTTCEEEEEECBSS------CEEEEEEEEC
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEecccC------cEEEEEEEEE
Confidence 999999999999974300001235789999863 9999998875
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.66 E-value=2.6e-07 Score=79.66 Aligned_cols=112 Identities=16% Similarity=0.226 Sum_probs=80.9
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECCe----EEeeecccCCCCCCcccceEEEEecCCCCCcEEEEEEeccCCCC
Q 004208 201 YLRVNVIEAQDLVPKQRNRNPEVFIKAIFGNV----VLKTTVSAKKTVNPTWNEDLMFVAAEPFDDPLILTVEDKLGDNK 276 (768)
Q Consensus 201 ~L~V~v~~a~~L~~~d~~~~~dpyV~v~lg~~----~~~T~~i~~~t~nP~wne~f~f~~~~~~~~~L~i~V~d~d~~~~ 276 (768)
.|+|.+.+..--+.+......||||.+.+... ..+|-+.+++|..|.||++|.-.+.+ ...|.|.|++..
T Consensus 7 flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a---- 80 (126)
T 1yrk_A 7 FLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAA---- 80 (126)
T ss_dssp EEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEET----
T ss_pred cEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCC----
Confidence 57888866653222223346899999998532 23553334459999999999998876 467999999643
Q ss_pred CceeEEEEEeccccccccCC-CCCCceeEEcccCccCccccccccccceEEEEEec
Q 004208 277 EECLGRLVLPLSKAGKRFLP-LPAAAIWYNLERNIANGEEKKDVRFASRICLRFSL 331 (768)
Q Consensus 277 d~~lG~~~i~l~~l~~~~~~-~~~~~~w~~L~~~~~~g~~~~~~~~~g~i~l~v~~ 331 (768)
.++++.|+|++.+|..++.. +...+-|++|++. |+|++.+.+
T Consensus 81 ~~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP~-------------Gkl~~~i~~ 123 (126)
T 1yrk_A 81 EEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQ-------------AKVLMSVQY 123 (126)
T ss_dssp TEEEEEEEEEHHHHHHHHHTTTTEEEEEEECBSS-------------CEEEEEEEE
T ss_pred CCeeeEEEEEHHHHHhhhccCCCceEEEEecccC-------------cEEEEEEEE
Confidence 28999999999999865321 3456789999985 888887753
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.53 E-value=4e-07 Score=79.54 Aligned_cols=111 Identities=12% Similarity=0.192 Sum_probs=81.7
Q ss_pred EEEEEEEEeecCCCCC-CCCCCCcEEEEEECCe----EEee-ecccCCCCCCcccceEEEEecCCCCCcEEEEEEeccCC
Q 004208 201 YLRVNVIEAQDLVPKQ-RNRNPEVFIKAIFGNV----VLKT-TVSAKKTVNPTWNEDLMFVAAEPFDDPLILTVEDKLGD 274 (768)
Q Consensus 201 ~L~V~v~~a~~L~~~d-~~~~~dpyV~v~lg~~----~~~T-~~i~~~t~nP~wne~f~f~~~~~~~~~L~i~V~d~d~~ 274 (768)
.|||.+.+..--+.+. .....||||.|.+... ..+| .+.++ |..|.||++|.-.+.+ ...|.|.|++..
T Consensus 11 flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~Kkk-T~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a-- 85 (138)
T 2enj_A 11 FLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKP-TMYPPWDSTFDAHINK--GRVMQIIVKGKN-- 85 (138)
T ss_dssp CEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEE-EECCCSSSEEEECCCS--SCEEEEEEECSS--
T ss_pred ceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCC-CCCccccceEeeeEEC--CeEEEEEEEcCC--
Confidence 5888887766433332 2346899999998532 2555 34444 9999999999988876 467999999642
Q ss_pred CCCceeEEEEEeccccccccC-CCCCCceeEEcccCccCccccccccccceEEEEEec
Q 004208 275 NKEECLGRLVLPLSKAGKRFL-PLPAAAIWYNLERNIANGEEKKDVRFASRICLRFSL 331 (768)
Q Consensus 275 ~~d~~lG~~~i~l~~l~~~~~-~~~~~~~w~~L~~~~~~g~~~~~~~~~g~i~l~v~~ 331 (768)
.+++..|+|++.+|..++. .+...+-|++|++. |+|++.+.+
T Consensus 86 --~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP~-------------Gkl~v~i~~ 128 (138)
T 2enj_A 86 --VDLISETTVELYSLAERCRKNNGKTEIWLELKPQ-------------GRMLMNARY 128 (138)
T ss_dssp --CSCCEEEEEESHHHHHHHHHTTTCEEEEEECBSS-------------CEEEEEEEE
T ss_pred --CCeeeEEEEEHHHHHhhhccCCCceEEEEecccC-------------cEEEEEEEE
Confidence 2899999999999986531 13456889999985 889988875
No 99
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=92.21 E-value=0.52 Score=42.51 Aligned_cols=126 Identities=14% Similarity=0.156 Sum_probs=86.5
Q ss_pred cccccccEEEEEEEEeecCCCCC--CCCCCCcEEEEEEC--C-eeeEeeeecCCCCCeeeeEEEEEecc-------CCCc
Q 004208 33 DLVEQMEFLYVRIVRARDLQVNQ--VTGTCDPYVEVKIG--N-YKGTTIPFEKKLNPEWNQVFAFTKER-------LQAI 100 (768)
Q Consensus 33 ~~~~~~~~L~V~i~~a~~L~~~d--~~g~~dPyv~v~~~--~-~~~~T~~~~~t~nP~Wne~f~f~~~~-------~~~~ 100 (768)
++.+..+.+.|+|.++. +.+.- ..+..+|..-+.++ + +.+.|.++. +.+|.+|.+-.|.+.- +++.
T Consensus 12 ~l~~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~ 89 (156)
T 2yrb_A 12 HLERGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKN 89 (156)
T ss_dssp SCCSSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHC
T ss_pred hccCCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcC
Confidence 34456689999999986 32110 12345777666655 4 445566554 8899999999998742 2356
Q ss_pred eEEEEEEEcCCCCCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCC-ccceEEEEEEEEcc
Q 004208 101 SVELLVKDKMIVNGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGS-RARGELMFAIWFGT 164 (768)
Q Consensus 101 ~L~i~V~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~-~~~G~i~l~i~~~~ 164 (768)
.+.++++......-+.||.+.|+|.++..... ....-.+|....+. ...|.|.+.+.+..
T Consensus 90 ~l~lELhqa~g~~~~tla~~~I~l~~lLe~~~----~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 90 TITLEVHQAYSTEYETIAACQLKFHEILEKSG----RIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp CEEEEEEEECSSCEEEEEEEEECCSHHHHCCS----CEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred CEEEEEEEeeCCCceEEEEEEEEhHHhhCcCC----ceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 89999988754467899999999999975521 13445677777664 36799988887754
No 100
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=87.57 E-value=3 Score=49.70 Aligned_cols=92 Identities=21% Similarity=0.293 Sum_probs=61.8
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEe--cCee----eeeccccCCCCCccccEEEEEEe--C-C-CcEEEEEE
Q 004208 361 GVLELGILSAKELLPMKSRDGRGTTDAYCVAKY--ANKW----VRTRTVVDSFDPKWNEQYTWEVY--D-P-YTVITLVV 430 (768)
Q Consensus 361 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~--g~~~----~~T~~~~~t~nP~wne~~~~~v~--~-~-~~~l~v~v 430 (768)
..++|+|.++.++.. +.....+-||.+.+ |++. .+|+.+. ..+|.|||-++|++. + | .+.|.++|
T Consensus 355 ~~f~v~i~~~~~~n~----~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl 429 (1091)
T 3hhm_A 355 SALRIKILCATYVNV----NIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSI 429 (1091)
T ss_dssp SEEEEEEEEESCCCC----CCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred CCEEEEEEEecCCCC----CccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEE
Confidence 468999999998865 22334678888666 7654 3444333 457889999999886 3 3 56999999
Q ss_pred EeCCCCCCCCCCCCceEEEEEeccccc
Q 004208 431 FDNCHLHPGGAKDSRIGKVRIRLSTLE 457 (768)
Q Consensus 431 ~d~~~~~~~~~~d~~lG~~~i~l~~l~ 457 (768)
|+......+.+....||.+.++|-+..
T Consensus 430 ~~~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 430 CSVKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCCCC-------CCEEEEEESBCTT
T ss_pred EEecCccCcccccceeEEeeeeeEccC
Confidence 986642100123568999999998743
No 101
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=85.85 E-value=3.3 Score=37.31 Aligned_cols=124 Identities=15% Similarity=0.216 Sum_probs=79.9
Q ss_pred CeeeEEEEEEEEecCCCCCCCCCCCCCcCc--EEEEEecC-eeeeeccccCCCCCccccEEEEEEeCC--------CcEE
Q 004208 358 PVIGVLELGILSAKELLPMKSRDGRGTTDA--YCVAKYAN-KWVRTRTVVDSFDPKWNEQYTWEVYDP--------YTVI 426 (768)
Q Consensus 358 ~~~g~l~v~v~~a~~L~~~~~~~~~g~~dp--yv~v~~g~-~~~~T~~~~~t~nP~wne~~~~~v~~~--------~~~l 426 (768)
+..+.++|+|.++. +.+.-. ...+..+| ||.+.+-. +..-|.++. ..+|.+|-+..|.|.-. ...+
T Consensus 15 ~gEnlfEihi~~~~-~~~~~l-~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 15 RGENLFEIHINKVT-FSSEVL-QASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp SSCEEEEEEEEEEC-CCHHHH-HHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred CCCcEEEEEEeEEE-EcHHHH-hhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 45567999998887 432100 00122345 45544434 556666655 78999999888888522 1378
Q ss_pred EEEEEeCCCCCCCCCCCCceEEEEEeccccccCc-eeeeeEeeeecCCCCcccccEEEEEEEEEe
Q 004208 427 TLVVFDNCHLHPGGAKDSRIGKVRIRLSTLETDR-IYTHSYPLVALLPNGVKKMGEVQLAVRFTC 490 (768)
Q Consensus 427 ~v~v~d~~~~~~~~~~d~~lG~~~i~l~~l~~~~-~~~~~~~L~~~~~~g~~~~G~i~l~~~~~~ 490 (768)
.|++..... ..-+.||.++|+|.++...+ .+...-+|.+... +....|.|+..+++..
T Consensus 92 ~lELhqa~g-----~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g-~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 92 TLEVHQAYS-----TEYETIAACQLKFHEILEKSGRIFCTASLIGTKG-DIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEEECS-----SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSS-CCTTSEEEEEEEEEEE
T ss_pred EEEEEEeeC-----CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCC-CcceEEEEEEEEEEec
Confidence 888877643 24569999999999988543 3455567766532 2135699999999864
No 102
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=84.75 E-value=7.8 Score=37.02 Aligned_cols=40 Identities=5% Similarity=0.201 Sum_probs=32.6
Q ss_pred eeEeeeecCCCCCeeeeEEEEEec--cCCCceEEEEEEEcCC
Q 004208 72 KGTTIPFEKKLNPEWNQVFAFTKE--RLQAISVELLVKDKMI 111 (768)
Q Consensus 72 ~~~T~~~~~t~nP~Wne~f~f~~~--~~~~~~L~i~V~d~~~ 111 (768)
.++|.+...+.+|.|+|++.+.+. ......|.|++++...
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 467888888999999999999864 4556889999988764
No 103
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=84.46 E-value=5.2 Score=47.23 Aligned_cols=91 Identities=13% Similarity=0.281 Sum_probs=61.6
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCCcCcEEEEEe--cCee----eeeccccCCCCCccccEEEEEEe--C-C-CcEEEEEE
Q 004208 361 GVLELGILSAKELLPMKSRDGRGTTDAYCVAKY--ANKW----VRTRTVVDSFDPKWNEQYTWEVY--D-P-YTVITLVV 430 (768)
Q Consensus 361 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~--g~~~----~~T~~~~~t~nP~wne~~~~~v~--~-~-~~~l~v~v 430 (768)
..++|.|.++.++.. + ..++-||.+.+ |++. ..|..+.-..+|.|||-++|++. + | ...|.++|
T Consensus 217 ~~f~i~i~~~~~~~~----~--~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti 290 (940)
T 2wxf_A 217 QPFSIELIEGRKVNA----D--ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFAL 290 (940)
T ss_dssp SEEEEEEEEEECCCC---------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred CceEEEEEEecccCC----C--CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEE
Confidence 359999999999965 2 34678887555 7754 45555555678999999999887 3 4 45899999
Q ss_pred EeCCCC--C---C---CCCCCCceEEEEEeccccc
Q 004208 431 FDNCHL--H---P---GGAKDSRIGKVRIRLSTLE 457 (768)
Q Consensus 431 ~d~~~~--~---~---~~~~d~~lG~~~i~l~~l~ 457 (768)
|+...- + . ..+.+..||.+.++|-+-.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 291 YAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EEEC----------------CEEEEEEEEESBCTT
T ss_pred EEecCCccCccccccccccccceEEEEeeeEECCc
Confidence 995321 0 0 0013459999999998743
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=81.08 E-value=6 Score=46.71 Aligned_cols=86 Identities=15% Similarity=0.223 Sum_probs=58.0
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----EEeeecccCCCCCCcccceEEEEec---CCCCCcEEEEEEec
Q 004208 201 YLRVNVIEAQDLVPKQRNRNPEVFIKAIF--GNV----VLKTTVSAKKTVNPTWNEDLMFVAA---EPFDDPLILTVEDK 271 (768)
Q Consensus 201 ~L~V~v~~a~~L~~~d~~~~~dpyV~v~l--g~~----~~~T~~i~~~t~nP~wne~f~f~~~---~~~~~~L~i~V~d~ 271 (768)
.++|.|.++.++... ...+-||++.+ |++ ...|+.+.. ..+|.|||-+.|++. -|.+..|.|+||+.
T Consensus 218 ~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~-~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 293 (940)
T 2wxf_A 218 PFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNV-CSEPVWKQRLEFDISVCDLPRMARLCFALYAV 293 (940)
T ss_dssp EEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEES-CSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred ceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccC-CCCcccceEEEcccccccCCcccEEEEEEEEe
Confidence 699999999998753 34678888776 654 234444443 678999999998763 34677899999986
Q ss_pred cCC--C----------CCceeEEEEEecccc
Q 004208 272 LGD--N----------KEECLGRLVLPLSKA 290 (768)
Q Consensus 272 d~~--~----------~d~~lG~~~i~l~~l 290 (768)
... + .+..+|.+.++|-+-
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 294 VEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp C----------------CEEEEEEEEESBCT
T ss_pred cCCccCccccccccccccceEEEEeeeEECC
Confidence 321 1 234778777776553
No 105
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=79.43 E-value=12 Score=44.58 Aligned_cols=102 Identities=21% Similarity=0.266 Sum_probs=66.6
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----eeEeeeecCCCCCeeeeEEEEEe--ccC-CCceEEEEEEEc
Q 004208 39 EFLYVRIVRARDLQVNQVTGTCDPYVEVKI--GNY----KGTTIPFEKKLNPEWNQVFAFTK--ERL-QAISVELLVKDK 109 (768)
Q Consensus 39 ~~L~V~i~~a~~L~~~d~~g~~dPyv~v~~--~~~----~~~T~~~~~t~nP~Wne~f~f~~--~~~-~~~~L~i~V~d~ 109 (768)
..++|+|..+.++... .....+-||.+.+ |++ ..+|+.+ ...+|.|||...|++ .++ ....|.|.||+.
T Consensus 355 ~~f~v~i~~~~~~n~~-~~~~~~~~V~~~l~hG~~~L~~~~~T~~~-~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 355 SALRIKILCATYVNVN-IRDIDKIYVRTGIYHGGEPLCDNVNTQRV-PCSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp SEEEEEEEEESCCCCC-CSSCCCCCEEEEEESSSCSSCCEECCCCC-CTTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCEEEEEEEecCCCCC-ccccceEEEEEEEEECCEEccCceecccc-CCCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 4789999999988643 2334567877765 442 3344433 356788999999985 343 368999999987
Q ss_pred CCC-----CCceeEEEEEcCCCCCCCCCCCCCCCCeEEEcccCCCCccceEEEEEEEE
Q 004208 110 MIV-----NGDFIGKIKIDMPDIPKRVPPDSPLAPEWKRLEAKDGSRARGELMFAIWF 162 (768)
Q Consensus 110 ~~~-----~d~~lG~~~i~l~~l~~~~~~~~~~~~~w~~L~~~~~~~~~G~i~l~i~~ 162 (768)
... ....||.+.+.|-+... .-..|...+.+|-
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd~~~--------------------~L~~G~~~L~lW~ 470 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFDYTD--------------------TLVSGKMALNLWP 470 (1091)
T ss_dssp CCCC-------CCEEEEEESBCTTC--------------------BBCCEEEEEECEE
T ss_pred cCccCcccccceeEEeeeeeEccCC--------------------eEEcCCeEEEeec
Confidence 642 22456776666665432 1134888888885
No 106
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=71.03 E-value=19 Score=42.64 Aligned_cols=92 Identities=13% Similarity=0.120 Sum_probs=57.7
Q ss_pred EEEEEEEEecCCCCCCCCCCCCCcCcEEEEEe--cCee---eeeccccCCCCCccccEEEEEEe--C-C-CcEEEEEEEe
Q 004208 362 VLELGILSAKELLPMKSRDGRGTTDAYCVAKY--ANKW---VRTRTVVDSFDPKWNEQYTWEVY--D-P-YTVITLVVFD 432 (768)
Q Consensus 362 ~l~v~v~~a~~L~~~~~~~~~g~~dpyv~v~~--g~~~---~~T~~~~~t~nP~wne~~~~~v~--~-~-~~~l~v~v~d 432 (768)
.++|.|.++..... ..+..++-||.+.+ |++. .+|..+.-+.+|.|||-++|++. + | .+.|.++||+
T Consensus 219 ~f~i~i~~~~~~~~----~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 294 (961)
T 1e7u_A 219 KFRVKIRGIDIPVL----PRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYC 294 (961)
T ss_dssp EEEEEEEEEECSSC----CTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred ceEEEEeecccccc----cCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEe
Confidence 58888888765221 01235678888544 7754 34444444568999999999886 3 4 4589999998
Q ss_pred CCCCCC------------CCCCCCceEEEEEeccccc
Q 004208 433 NCHLHP------------GGAKDSRIGKVRIRLSTLE 457 (768)
Q Consensus 433 ~~~~~~------------~~~~d~~lG~~~i~l~~l~ 457 (768)
....+. ..++...||.+.++|-+..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 295 GAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp EEC--------------------CEEEEEEEESBCTT
T ss_pred cccCccccccccccccccccccceeEEEEeeeeecCC
Confidence 532110 0124568999999998754
No 107
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=68.22 E-value=5.7 Score=47.57 Aligned_cols=91 Identities=14% Similarity=0.234 Sum_probs=59.6
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCCcCcEEE--EEecCee----eeeccccCCCCCccccEEEEEEe--C-C-CcEEEEEE
Q 004208 361 GVLELGILSAKELLPMKSRDGRGTTDAYCV--AKYANKW----VRTRTVVDSFDPKWNEQYTWEVY--D-P-YTVITLVV 430 (768)
Q Consensus 361 g~l~v~v~~a~~L~~~~~~~~~g~~dpyv~--v~~g~~~----~~T~~~~~t~nP~wne~~~~~v~--~-~-~~~l~v~v 430 (768)
..++|.|.++.++.. + ..++-||. +..|++. ..|..+.-+.+|.|||-++|++. + | .+.|.++|
T Consensus 353 ~~f~i~i~~~~~~~~----~--~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti 426 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNT----E--ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAV 426 (1092)
T ss_dssp SEEEEEECCCCCCCC----C--SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEEC
T ss_pred CCEEEEEEEeccCCC----C--CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEE
Confidence 469999999999865 2 34677777 5557765 44555554678999999999886 3 3 45999999
Q ss_pred EeCCCCCCC------------------CCCCCceEEEEEeccccc
Q 004208 431 FDNCHLHPG------------------GAKDSRIGKVRIRLSTLE 457 (768)
Q Consensus 431 ~d~~~~~~~------------------~~~d~~lG~~~i~l~~l~ 457 (768)
|+......+ .+.+..||.+.++|-+-.
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 471 (1092)
T 2y3a_A 427 YAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFK 471 (1092)
T ss_dssp CCC------------------------------CCEEEEESBCTT
T ss_pred EEecCccccccccccccccccccccccccccceeEEEeeeeECCc
Confidence 986311000 012358999999998743
No 108
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=66.66 E-value=19 Score=42.60 Aligned_cols=70 Identities=26% Similarity=0.226 Sum_probs=45.8
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCeE---EeeecccCCCCCCcccceEEEEec---CCCCCcEEEEEEecc
Q 004208 201 YLRVNVIEAQDLVPKQRNRNPEVFIKAIF--GNVV---LKTTVSAKKTVNPTWNEDLMFVAA---EPFDDPLILTVEDKL 272 (768)
Q Consensus 201 ~L~V~v~~a~~L~~~d~~~~~dpyV~v~l--g~~~---~~T~~i~~~t~nP~wne~f~f~~~---~~~~~~L~i~V~d~d 272 (768)
.++|.|..+...... .+...+.||++.+ |++. .+|+.+.- +.+|.|||-+.|.+. -|.+..|.|+||+..
T Consensus 219 ~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~-~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 219 KFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPF-TEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp EEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEEC-CSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred ceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeecccc-CCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 488888887642211 1234578888766 6643 23444433 567999999888753 346778999999854
No 109
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=62.34 E-value=23 Score=33.73 Aligned_cols=59 Identities=7% Similarity=0.065 Sum_probs=39.8
Q ss_pred eeeeeccccCCCCCccccEEEEEEeC---CCcEEEEEEEeCCCCCCCCCCCCceEEEEEecc
Q 004208 396 KWVRTRTVVDSFDPKWNEQYTWEVYD---PYTVITLVVFDNCHLHPGGAKDSRIGKVRIRLS 454 (768)
Q Consensus 396 ~~~~T~~~~~t~nP~wne~~~~~v~~---~~~~l~v~v~d~~~~~~~~~~d~~lG~~~i~l~ 454 (768)
..++|.+.+.+.+|.|+|++-+.+.. +...|.++++.-..-...+..+..+|.+-+||-
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 34888888999999999999988874 345899998865431100112345676666654
No 110
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=56.68 E-value=11 Score=45.23 Aligned_cols=73 Identities=16% Similarity=0.202 Sum_probs=51.1
Q ss_pred ccccccccEEEEEEEEeecCCCCCCCCCCCcEEE--EEECCe----eeEeeeecCCCCCeeeeEEEEEe--ccC-CCceE
Q 004208 32 FDLVEQMEFLYVRIVRARDLQVNQVTGTCDPYVE--VKIGNY----KGTTIPFEKKLNPEWNQVFAFTK--ERL-QAISV 102 (768)
Q Consensus 32 ~~~~~~~~~L~V~i~~a~~L~~~d~~g~~dPyv~--v~~~~~----~~~T~~~~~t~nP~Wne~f~f~~--~~~-~~~~L 102 (768)
+++. ..+.|+|..+.++... ..++-||. +..|++ ..+|+.+..+.+|.|||.+.|++ .++ ....|
T Consensus 349 ~~~~---~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L 422 (1092)
T 2y3a_A 349 WDNN---NPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARL 422 (1092)
T ss_dssp CCCC---SEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEE
T ss_pred hhcC---CCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEE
Confidence 4554 4799999999998654 24566665 555663 23455555577899999999985 343 36789
Q ss_pred EEEEEEcC
Q 004208 103 ELLVKDKM 110 (768)
Q Consensus 103 ~i~V~d~~ 110 (768)
.|.||+..
T Consensus 423 ~~ti~~~~ 430 (1092)
T 2y3a_A 423 CFAVYAVL 430 (1092)
T ss_dssp EEECCCC-
T ss_pred EEEEEEec
Confidence 99999874
No 111
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=41.87 E-value=65 Score=25.92 Aligned_cols=39 Identities=10% Similarity=0.241 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCchhHH
Q 004208 672 RYDRLRSIAARMVTLNGDLDSQLERLQSLIDWRDPRATA 710 (768)
Q Consensus 672 ~~~~l~~~~~~vQ~~l~~~a~~~e~~~~l~~w~~p~~t~ 710 (768)
+++.|.+....++..-..+.....+++.-+-|++-+...
T Consensus 34 kL~~L~~kt~~L~~~s~~F~~~A~~l~rkmwwkn~K~~i 72 (91)
T 3hd7_A 34 KLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMI 72 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666677777777777778888888898866543
No 112
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=25.14 E-value=58 Score=21.64 Aligned_cols=19 Identities=16% Similarity=0.401 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 004208 682 RMVTLNGDLDSQLERLQSL 700 (768)
Q Consensus 682 ~vQ~~l~~~a~~~e~~~~l 700 (768)
.+|++-+.+|++++|++.+
T Consensus 7 ~mq~LNdrlAsyidkVR~L 25 (39)
T 1gk7_A 7 ELQELNDRFANYIDKVRFL 25 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999875
Done!