Query 004210
Match_columns 768
No_of_seqs 385 out of 2734
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 17:46:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004210.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004210hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 100.0 2E-110 8E-115 971.9 71.1 644 1-679 2-648 (675)
2 4b9q_A Chaperone protein DNAK; 100.0 4.2E-98 1E-102 863.7 69.7 590 1-657 1-604 (605)
3 2kho_A Heat shock protein 70; 100.0 9.4E-97 3E-101 852.4 60.7 588 2-656 3-603 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 2.9E-91 1E-95 799.3 50.2 542 2-598 5-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 1.3E-80 4.4E-85 706.1 52.7 499 2-588 3-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 3.1E-64 1.1E-68 558.3 43.1 380 1-383 23-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 1.4E-62 4.7E-67 543.6 43.2 374 3-382 20-394 (394)
8 4gni_A Putative heat shock pro 100.0 1.8E-62 6E-67 544.8 39.7 378 1-384 13-404 (409)
9 1dkg_D Molecular chaperone DNA 100.0 1.8E-60 6.1E-65 524.3 39.2 372 2-382 3-383 (383)
10 1jce_A ROD shape-determining p 100.0 2.1E-40 7.2E-45 358.8 23.2 309 2-382 4-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 9.1E-33 3.1E-37 274.1 26.9 211 391-657 2-216 (219)
12 1u00_A HSC66, chaperone protei 100.0 1.9E-31 6.4E-36 267.7 28.4 210 393-658 1-214 (227)
13 2fsj_A Hypothetical protein TA 99.9 4.6E-28 1.6E-32 260.8 14.6 227 113-379 95-343 (346)
14 2ych_A Competence protein PILM 99.9 3.4E-27 1.2E-31 258.4 14.4 317 3-379 15-373 (377)
15 3h1q_A Ethanolamine utilizatio 99.9 1.2E-25 4.1E-30 234.7 22.2 202 117-378 71-272 (272)
16 3n8e_A Stress-70 protein, mito 99.9 3.1E-26 1.1E-30 219.4 15.4 160 388-598 18-181 (182)
17 1k8k_A ARP3, actin-like protei 99.9 7.4E-25 2.5E-29 243.0 15.3 227 138-380 107-387 (418)
18 4a2a_A Cell division protein F 99.9 2.8E-24 9.5E-29 236.2 18.6 199 152-381 168-394 (419)
19 2fxu_A Alpha-actin-1, actin, a 99.9 7.7E-25 2.6E-29 239.0 11.4 305 2-379 6-348 (375)
20 3h0x_A 78 kDa glucose-regulate 99.9 8.5E-23 2.9E-27 190.6 16.1 147 392-588 2-152 (152)
21 3dob_A Heat shock 70 kDa prote 99.9 1.1E-22 3.6E-27 189.6 14.1 147 392-588 2-152 (152)
22 3dqg_A Heat shock 70 kDa prote 99.9 1.4E-22 4.8E-27 188.6 12.8 146 392-588 2-151 (151)
23 2zgy_A Plasmid segregation pro 99.9 7.5E-23 2.6E-27 218.4 11.9 226 112-378 73-319 (320)
24 2op6_A Heat shock 70 kDa prote 99.9 2E-21 6.7E-26 182.7 15.1 147 392-588 2-152 (152)
25 4ehu_A Activator of 2-hydroxyi 99.8 4.2E-18 1.4E-22 177.7 24.4 184 163-382 68-256 (276)
26 1k8k_B ARP2, actin-like protei 99.8 5.8E-20 2E-24 201.4 1.7 215 139-379 105-363 (394)
27 3js6_A Uncharacterized PARM pr 99.7 5.6E-17 1.9E-21 174.2 13.1 208 139-383 114-339 (355)
28 1q5l_A Chaperone protein DNAK; 99.6 3.3E-15 1.1E-19 136.3 11.1 101 387-494 14-118 (135)
29 4apw_A ALP12; actin-like prote 99.6 4.3E-16 1.5E-20 166.0 5.1 204 139-381 106-325 (329)
30 3qb0_A Actin-related protein 4 99.4 7.5E-12 2.6E-16 138.7 17.5 178 2-245 24-209 (498)
31 3dwl_A Actin-related protein 3 99.3 4.6E-13 1.6E-17 147.1 5.5 223 139-379 124-395 (427)
32 3lof_A Heat shock 70 kDa prote 99.2 5.6E-11 1.9E-15 105.2 11.1 82 576-658 3-85 (113)
33 2d0o_A DIOL dehydratase-reacti 99.1 4.5E-10 1.5E-14 121.3 16.0 196 152-380 368-604 (610)
34 1nbw_A Glycerol dehydratase re 99.1 3.3E-10 1.1E-14 122.9 13.9 193 154-379 372-605 (607)
35 4fo0_A Actin-related protein 8 99.1 2.5E-09 8.5E-14 123.6 22.1 94 140-246 200-294 (593)
36 2p32_A Heat shock 70 kDa prote 99.0 9.1E-10 3.1E-14 98.3 8.1 81 576-657 12-93 (120)
37 1hux_A Activator of (R)-2-hydr 98.9 6.8E-08 2.3E-12 99.5 21.2 172 168-381 76-257 (270)
38 1ud0_A HSC70, 70 kDa heat-shoc 98.9 1.3E-09 4.5E-14 96.5 5.3 77 580-657 2-79 (113)
39 2ews_A Pantothenate kinase; PA 98.3 3.7E-05 1.2E-09 78.8 19.8 75 299-378 207-286 (287)
40 4am6_A Actin-like protein ARP8 97.8 6.8E-05 2.3E-09 84.0 10.2 126 139-282 222-349 (655)
41 2ivn_A O-sialoglycoprotein end 97.2 0.069 2.4E-06 56.1 23.7 66 311-381 228-299 (330)
42 2i7n_A Pantothenate kinase 1; 96.9 0.017 5.7E-07 60.8 15.4 69 305-378 279-358 (360)
43 3vov_A Glucokinase, hexokinase 96.9 0.038 1.3E-06 57.3 18.2 44 164-212 98-141 (302)
44 3vgl_A Glucokinase; ROK family 96.7 0.17 5.9E-06 52.7 22.2 45 164-213 96-140 (321)
45 2e2o_A Hexokinase; acetate and 96.6 0.22 7.5E-06 51.3 21.8 48 332-380 239-287 (299)
46 3eno_A Putative O-sialoglycopr 96.6 0.47 1.6E-05 49.7 24.3 68 311-383 233-306 (334)
47 1t6c_A Exopolyphosphatase; alp 96.5 0.014 4.7E-07 60.9 11.9 77 155-239 101-177 (315)
48 3h3n_X Glycerol kinase; ATP-bi 96.5 0.024 8.2E-07 63.5 14.4 83 299-385 372-455 (506)
49 2ch5_A NAGK protein; transfera 96.3 1.2 4E-05 46.8 25.6 46 137-182 70-118 (347)
50 3lof_A Heat shock 70 kDa prote 96.3 0.019 6.4E-07 50.0 9.3 73 657-741 3-79 (113)
51 4htl_A Beta-glucoside kinase; 96.2 0.16 5.6E-06 52.3 18.1 49 332-380 237-291 (297)
52 3r8e_A Hypothetical sugar kina 96.2 0.018 6.2E-07 60.4 10.6 46 163-213 116-162 (321)
53 4db3_A Glcnac kinase, N-acetyl 96.2 0.93 3.2E-05 47.2 23.9 44 164-212 120-163 (327)
54 3l0q_A Xylulose kinase; xlylul 96.1 0.0083 2.8E-07 68.0 7.8 84 298-385 408-494 (554)
55 4bc3_A Xylulose kinase; transf 95.9 0.012 4.3E-07 66.3 7.8 77 306-383 408-484 (538)
56 3hz6_A Xylulokinase; xylulose, 95.8 0.012 4.3E-07 65.8 7.7 81 299-385 374-455 (511)
57 3i8b_A Xylulose kinase; strain 95.8 0.016 5.4E-07 65.0 8.4 79 300-383 395-474 (515)
58 2itm_A Xylulose kinase, xylulo 95.8 0.01 3.6E-07 66.1 6.8 53 332-384 386-438 (484)
59 2zf5_O Glycerol kinase; hypert 95.8 0.014 4.7E-07 65.3 7.8 80 300-384 365-444 (497)
60 2qm1_A Glucokinase; alpha-beta 95.6 0.21 7.2E-06 52.1 15.9 44 164-212 108-151 (326)
61 3ifr_A Carbohydrate kinase, FG 95.6 0.019 6.5E-07 64.3 8.1 81 300-385 371-452 (508)
62 3ll3_A Gluconate kinase; xylul 95.6 0.019 6.4E-07 64.3 8.0 79 300-385 364-445 (504)
63 3g25_A Glycerol kinase; IDP007 95.5 0.023 7.9E-07 63.5 8.3 82 300-385 374-456 (501)
64 2gup_A ROK family protein; sug 95.4 1.8 6.3E-05 44.0 21.9 42 164-212 94-135 (292)
65 3ezw_A Glycerol kinase; glycer 95.4 0.023 7.9E-07 63.9 7.7 83 299-385 371-454 (526)
66 3jvp_A Ribulokinase; PSI-II, N 95.2 0.026 8.8E-07 64.2 7.4 79 300-383 410-490 (572)
67 2p3r_A Glycerol kinase; glycer 95.1 0.03 1E-06 62.7 7.6 82 300-385 371-453 (510)
68 2aa4_A Mannac kinase, putative 95.1 0.22 7.4E-06 51.0 13.5 43 164-212 96-138 (289)
69 2dpn_A Glycerol kinase; thermu 95.0 0.034 1.1E-06 62.1 7.3 80 300-383 368-448 (495)
70 4e1j_A Glycerol kinase; struct 94.9 0.037 1.3E-06 62.1 7.5 53 332-385 425-477 (520)
71 2d4w_A Glycerol kinase; alpha 94.9 0.051 1.7E-06 60.7 8.4 81 300-384 373-454 (504)
72 2w40_A Glycerol kinase, putati 94.7 0.057 1.9E-06 60.3 8.3 81 300-384 376-458 (503)
73 3mdq_A Exopolyphosphatase; str 94.6 0.12 4.2E-06 53.7 10.0 78 155-239 93-170 (315)
74 2uyt_A Rhamnulokinase; rhamnos 94.5 0.058 2E-06 60.1 7.9 78 297-380 360-439 (489)
75 2ap1_A Putative regulator prot 94.4 0.96 3.3E-05 47.0 16.7 44 164-212 120-163 (327)
76 1woq_A Inorganic polyphosphate 94.4 1.8 6.2E-05 43.5 18.2 45 164-212 114-158 (267)
77 2hoe_A N-acetylglucosamine kin 93.9 1.7 5.7E-05 46.3 17.4 42 164-212 188-229 (380)
78 1z05_A Transcriptional regulat 93.6 1.4 4.9E-05 47.7 16.6 44 164-212 208-251 (429)
79 3en9_A Glycoprotease, O-sialog 93.6 7.8 0.00027 43.2 23.0 60 311-375 232-297 (540)
80 2yhw_A Bifunctional UDP-N-acet 93.6 7 0.00024 40.6 21.5 44 164-212 131-174 (343)
81 1z6r_A MLC protein; transcript 93.5 2.4 8.1E-05 45.6 17.9 44 164-212 186-229 (406)
82 1u6z_A Exopolyphosphatase; alp 93.0 0.24 8.2E-06 55.2 9.3 75 156-239 101-176 (513)
83 4e81_A Chaperone protein DNAK; 92.6 0.92 3.1E-05 44.2 11.8 45 682-741 167-211 (219)
84 2p32_A Heat shock 70 kDa prote 92.1 0.53 1.8E-05 41.1 8.3 70 660-741 15-88 (120)
85 1zbs_A Hypothetical protein PG 91.9 2.5 8.6E-05 43.0 14.8 68 307-380 211-280 (291)
86 3h6e_A Carbohydrate kinase, FG 90.9 0.19 6.5E-06 55.6 5.2 72 305-381 362-436 (482)
87 3bex_A Type III pantothenate k 89.3 4.3 0.00015 40.3 13.2 21 2-22 4-24 (249)
88 1u00_A HSC66, chaperone protei 89.2 2.7 9.1E-05 41.2 11.4 45 682-741 164-208 (227)
89 1ud0_A HSC70, 70 kDa heat-shoc 88.7 0.57 1.9E-05 40.4 5.4 64 666-741 7-74 (113)
90 1sz2_A Glucokinase, glucose ki 88.5 25 0.00084 36.2 21.7 49 163-212 100-155 (332)
91 3cer_A Possible exopolyphospha 87.9 0.78 2.7E-05 48.1 7.0 80 155-239 106-191 (343)
92 1zc6_A Probable N-acetylglucos 87.7 26 0.00088 35.6 25.0 64 307-379 227-292 (305)
93 1iv0_A Hypothetical protein; r 86.6 0.43 1.5E-05 40.0 3.2 22 1-22 1-22 (98)
94 3epq_A Putative fructokinase; 83.3 4.2 0.00014 41.6 9.7 51 154-212 90-140 (302)
95 3d2f_A Heat shock protein homo 83.1 3.9 0.00013 47.0 10.2 68 663-741 551-621 (675)
96 3o8m_A Hexokinase; rnaseh-like 82.9 14 0.00047 40.4 13.9 58 151-215 185-244 (485)
97 4b9q_A Chaperone protein DNAK; 82.8 7 0.00024 44.3 12.1 45 682-741 555-599 (605)
98 2kho_A Heat shock protein 70; 82.1 4.6 0.00016 45.8 10.2 45 682-741 555-599 (605)
99 3hi0_A Putative exopolyphospha 82.0 1.9 6.4E-05 47.9 6.8 74 154-237 103-177 (508)
100 2yhx_A Hexokinase B; transfera 80.9 5.7 0.0002 43.2 10.0 56 152-214 164-221 (457)
101 1vhx_A Putative holliday junct 80.4 0.88 3E-05 41.4 2.8 22 1-22 3-24 (150)
102 3aap_A Ectonucleoside triphosp 79.1 2.1 7.1E-05 45.0 5.6 48 165-213 108-158 (353)
103 4g9i_A Hydrogenase maturation 75.8 7.1 0.00024 45.4 9.3 64 313-381 691-760 (772)
104 3ttc_A HYPF, transcriptional r 71.4 6.8 0.00023 44.4 7.5 65 311-380 583-651 (657)
105 1quu_A Human skeletal muscle a 70.6 81 0.0028 30.6 16.8 43 691-734 133-175 (250)
106 1hjr_A Holliday junction resol 70.6 4 0.00014 37.3 4.4 19 1-19 1-19 (158)
107 1nu0_A Hypothetical protein YQ 68.5 3.6 0.00012 36.7 3.6 21 2-22 4-24 (138)
108 3qbx_A Anhydro-N-acetylmuramic 68.5 11 0.00039 39.3 7.8 71 307-380 261-336 (371)
109 3cj1_A Ectonucleoside triphosp 66.9 7.1 0.00024 42.4 6.2 20 194-213 189-208 (456)
110 1bdg_A Hexokinase; phosphotran 66.0 30 0.001 37.5 11.0 58 150-214 171-230 (451)
111 3cqy_A Anhydro-N-acetylmuramic 65.5 11 0.00038 39.4 7.1 69 306-380 267-342 (370)
112 3mcp_A Glucokinase; structural 65.5 54 0.0019 34.3 12.6 44 164-212 108-164 (366)
113 3vth_A Hydrogenase maturation 65.3 8.6 0.00029 44.5 6.8 65 313-382 679-749 (761)
114 4ep4_A Crossover junction endo 64.7 4.6 0.00016 37.2 3.6 22 1-22 1-22 (166)
115 3s84_A Apolipoprotein A-IV; fo 64.7 1.2E+02 0.004 30.2 14.3 97 559-656 45-149 (273)
116 3hm8_A Hexokinase-3; glucose, 64.3 56 0.0019 35.1 12.4 58 150-214 159-219 (445)
117 3ven_A O-carbamoyltransferase 61.5 16 0.00053 40.8 7.7 66 313-383 293-360 (576)
118 2w40_A Glycerol kinase, putati 58.7 5.7 0.00019 44.0 3.7 21 2-22 5-25 (503)
119 2e1z_A Propionate kinase; TDCD 58.6 1.9E+02 0.0064 30.6 15.1 45 308-356 310-355 (415)
120 3ll3_A Gluconate kinase; xylul 58.4 5.3 0.00018 44.2 3.4 21 2-22 5-25 (504)
121 3kbt_A Beta-I spectrin, spectr 58.0 1.6E+02 0.0054 29.6 15.3 23 688-710 218-240 (326)
122 1cza_N Hexokinase type I; stru 57.1 17 0.00058 43.3 7.6 58 150-214 630-690 (917)
123 3ezw_A Glycerol kinase; glycer 57.0 5.2 0.00018 44.5 3.0 21 2-22 5-25 (526)
124 2dpn_A Glycerol kinase; thermu 56.8 5.3 0.00018 44.1 3.0 21 2-22 3-23 (495)
125 1nbw_A Glycerol dehydratase re 56.7 61 0.0021 35.7 11.0 34 139-172 131-164 (607)
126 2d0o_A DIOL dehydratase-reacti 56.1 51 0.0018 36.2 10.3 36 137-172 127-162 (610)
127 3l0q_A Xylulose kinase; xlylul 55.9 6.7 0.00023 43.9 3.7 21 2-22 6-26 (554)
128 3f9m_A Glucokinase; hexokinase 55.6 1E+02 0.0035 33.3 12.8 58 150-214 183-243 (470)
129 2p3r_A Glycerol kinase; glycer 55.5 6.3 0.00021 43.7 3.3 21 2-22 4-24 (510)
130 1cza_N Hexokinase type I; stru 55.5 64 0.0022 38.4 12.2 55 152-213 184-241 (917)
131 3ifr_A Carbohydrate kinase, FG 54.4 6.7 0.00023 43.4 3.4 21 2-22 8-28 (508)
132 3g25_A Glycerol kinase; IDP007 54.1 6.8 0.00023 43.3 3.3 21 2-22 7-27 (501)
133 4ijn_A Acetate kinase, acetoki 53.5 87 0.003 32.9 11.3 46 308-357 303-349 (398)
134 3h3n_X Glycerol kinase; ATP-bi 53.3 7.9 0.00027 42.8 3.7 21 2-22 6-26 (506)
135 4bc3_A Xylulose kinase; transf 53.2 7.2 0.00025 43.5 3.4 21 2-22 11-31 (538)
136 2zf5_O Glycerol kinase; hypert 52.8 7.3 0.00025 43.0 3.3 21 2-22 4-24 (497)
137 3hz6_A Xylulokinase; xylulose, 52.7 7.1 0.00024 43.2 3.2 21 2-22 6-26 (511)
138 3i8b_A Xylulose kinase; strain 52.5 7.9 0.00027 42.9 3.5 21 2-22 6-27 (515)
139 3h6e_A Carbohydrate kinase, FG 52.2 6.1 0.00021 43.4 2.5 21 2-22 7-27 (482)
140 3jvp_A Ribulokinase; PSI-II, N 51.4 8.3 0.00028 43.4 3.5 21 2-22 6-27 (572)
141 3zx3_A Ectonucleoside triphosp 51.1 18 0.00061 39.1 5.9 44 168-213 151-199 (452)
142 2uyt_A Rhamnulokinase; rhamnos 51.1 6.1 0.00021 43.5 2.3 20 2-21 5-24 (489)
143 3nmd_A CGMP dependent protein 50.8 43 0.0015 25.8 6.2 46 561-607 26-71 (72)
144 2dfs_A Myosin-5A; myosin-V, in 50.8 75 0.0026 38.4 11.8 18 583-600 922-939 (1080)
145 4e1j_A Glycerol kinase; struct 50.0 8.7 0.0003 42.6 3.3 21 2-22 27-47 (520)
146 3f31_A Spectrin alpha chain, b 48.7 1.1E+02 0.0039 26.9 10.2 82 633-737 13-94 (149)
147 3djc_A Type III pantothenate k 48.4 10 0.00035 37.9 3.3 21 2-22 3-23 (266)
148 2itm_A Xylulose kinase, xylulo 48.3 8.9 0.0003 42.1 3.0 20 3-22 2-21 (484)
149 3cet_A Conserved archaeal prot 48.0 14 0.00046 38.1 4.1 68 300-377 244-321 (334)
150 2d4w_A Glycerol kinase; alpha 46.0 10 0.00034 41.9 3.0 21 2-22 3-23 (504)
151 1hnj_A Beta-ketoacyl-acyl carr 44.1 23 0.00078 36.1 5.3 48 308-358 213-260 (317)
152 3r6n_A Desmoplakin; spectrin r 44.1 3E+02 0.01 29.4 14.2 126 612-738 5-143 (450)
153 3khy_A Propionate kinase; csgi 42.1 1.5E+02 0.0051 30.9 10.8 44 309-356 294-338 (384)
154 2iak_A Bullous pemphigoid anti 41.9 1.7E+02 0.0057 27.8 10.9 25 688-712 121-145 (224)
155 3f9m_A Glucokinase; hexokinase 41.1 67 0.0023 34.7 8.4 52 193-247 75-135 (470)
156 3uul_A Utrophin; spectrin repe 40.7 1.5E+02 0.0052 24.4 13.3 85 611-705 4-96 (118)
157 2y6x_A PSB27, photosystem II 1 40.6 1.7E+02 0.0057 24.8 10.9 91 612-705 14-109 (113)
158 3r9p_A ACKA; ssgcid, seattle s 39.7 2E+02 0.0069 30.0 11.5 46 308-357 294-340 (391)
159 3o8m_A Hexokinase; rnaseh-like 39.7 62 0.0021 35.2 7.9 31 193-223 78-109 (485)
160 3uul_A Utrophin; spectrin repe 39.2 62 0.0021 27.0 6.5 25 688-712 3-27 (118)
161 2yhx_A Hexokinase B; transfera 37.5 1.1E+02 0.0039 32.9 9.6 26 193-218 59-84 (457)
162 1ub7_A 3-oxoacyl-[acyl-carrier 37.4 30 0.001 35.3 4.9 46 310-358 217-262 (322)
163 2ebd_A 3-oxoacyl-[acyl-carrier 36.6 32 0.0011 34.8 4.9 46 310-358 207-252 (309)
164 3uun_A Dystrophin; triple heli 34.8 1.9E+02 0.0065 23.8 13.7 45 610-654 3-55 (119)
165 3edu_A Beta-I spectrin, spectr 34.5 2.5E+02 0.0087 26.2 10.9 23 688-710 109-131 (218)
166 3kbt_A Beta-I spectrin, spectr 34.0 3.6E+02 0.012 26.8 13.9 47 689-736 112-158 (326)
167 3htv_A D-allose kinase, alloki 33.6 86 0.0029 31.7 7.6 48 332-379 239-298 (310)
168 4ehp_B Catenin alpha-1; adhere 33.2 31 0.0011 29.1 3.2 78 656-735 26-109 (111)
169 3oja_B Anopheles plasmodium-re 32.7 5.3E+02 0.018 28.3 16.2 27 688-714 556-582 (597)
170 1saz_A Probable butyrate kinas 31.3 76 0.0026 33.3 6.9 48 332-379 295-347 (381)
171 3uun_A Dystrophin; triple heli 31.1 77 0.0026 26.4 5.8 25 688-712 3-27 (119)
172 4am6_A Actin-like protein ARP8 30.7 20 0.00068 40.4 2.2 48 310-357 476-525 (655)
173 1zxo_A Conserved hypothetical 30.4 20 0.00068 36.2 2.1 46 332-379 232-277 (291)
174 3epq_A Putative fructokinase; 29.9 1E+02 0.0036 31.0 7.5 48 332-379 224-288 (302)
175 2h3g_X Biosynthetic protein; p 28.7 33 0.0011 34.2 3.3 20 3-22 2-21 (268)
176 1mzj_A Beta-ketoacylsynthase I 28.3 43 0.0015 34.5 4.2 45 311-358 229-273 (339)
177 3sk3_A Acetate kinase, acetoki 27.3 1.3E+02 0.0045 31.8 7.7 48 307-357 317-365 (415)
178 1msz_A DNA-binding protein smu 26.1 41 0.0014 27.0 2.7 28 141-168 34-61 (86)
179 1zow_A 3-oxoacyl-[acyl-carrier 26.1 48 0.0016 33.5 4.1 46 310-358 209-254 (313)
180 3hm8_A Hexokinase-3; glucose, 26.1 1.7E+02 0.0057 31.4 8.3 34 193-227 57-90 (445)
181 1ywm_A C protein alpha-antigen 25.9 2.7E+02 0.0093 25.0 8.1 53 676-741 134-186 (200)
182 2ra1_A Surface layer protein; 25.8 3.3E+02 0.011 28.3 9.9 120 612-744 101-232 (412)
183 2a01_A Apolipoprotein A-I; fou 25.7 2.3E+02 0.008 27.4 8.8 120 557-677 109-241 (243)
184 2x3e_A 3-oxoacyl-[acyl-carrier 25.4 45 0.0015 34.2 3.7 46 310-358 221-266 (331)
185 4dfe_A 3-oxoacyl-[acyl-carrier 25.2 78 0.0027 32.4 5.6 49 308-359 229-277 (333)
186 2kmf_A Photosystem II 11 kDa p 25.2 3.1E+02 0.011 23.2 10.8 90 612-704 18-112 (115)
187 1saz_A Probable butyrate kinas 25.2 42 0.0015 35.3 3.6 20 2-21 3-22 (381)
188 1g99_A Acetate kinase; alpha/b 23.9 72 0.0025 33.7 4.9 46 307-356 301-347 (408)
189 3nr7_A DNA-binding protein H-N 23.8 2.8E+02 0.0095 22.1 9.2 58 632-692 24-81 (86)
190 3zyy_X Iron-sulfur cluster bin 23.7 1.2E+02 0.0042 34.0 7.0 47 297-344 500-546 (631)
191 3htv_A D-allose kinase, alloki 23.7 48 0.0017 33.6 3.5 21 2-22 8-28 (310)
192 1u6e_A 3-oxoacyl-[acyl-carrier 23.4 67 0.0023 32.7 4.7 45 311-358 230-274 (335)
193 4h0o_A Acetate kinase; askha ( 22.6 2.6E+02 0.0088 29.3 8.7 47 307-357 305-352 (404)
194 3r2p_A Apolipoprotein A-I; amp 22.5 4.5E+02 0.015 24.0 10.7 46 553-600 66-111 (185)
195 2q2r_A Glucokinase 1, putative 22.4 49 0.0017 34.6 3.3 20 1-20 29-48 (373)
196 1gs9_A Apolipoprotein E, APOE4 21.8 3.7E+02 0.013 24.3 8.7 44 553-598 83-126 (165)
197 2dfs_A Myosin-5A; myosin-V, in 21.7 1.1E+03 0.037 28.3 15.3 27 140-166 158-186 (1080)
198 4ewp_A 3-oxoacyl-[acyl-carrier 21.7 98 0.0034 31.8 5.5 44 315-358 66-111 (350)
199 2odv_A Plectin 1, HD1; plakin 21.3 5.5E+02 0.019 24.6 18.5 47 689-736 130-180 (235)
200 2f9w_A Pantothenate kinase; CO 21.3 60 0.002 32.3 3.5 21 2-22 24-45 (271)
201 3edv_A Spectrin beta chain, br 21.1 6.1E+02 0.021 25.0 14.4 22 688-709 114-135 (323)
202 3nmd_A CGMP dependent protein 20.9 1.7E+02 0.0058 22.5 5.0 38 639-676 30-67 (72)
203 1d7m_A Cortexillin I; coiled-c 20.7 3.2E+02 0.011 21.7 10.2 61 614-679 2-62 (101)
204 1bdg_A Hexokinase; phosphotran 20.7 2.3E+02 0.0079 30.4 8.3 24 193-216 66-89 (451)
205 3s5m_A Falcilysin; M16 metallo 20.7 6.8E+02 0.023 30.5 13.3 129 558-704 481-629 (1193)
206 3s21_A 3-oxoacyl-[ACP] synthas 20.2 1E+02 0.0035 31.6 5.3 50 307-359 240-289 (345)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=2.2e-110 Score=971.90 Aligned_cols=644 Identities=35% Similarity=0.607 Sum_probs=590.1
Q ss_pred CeEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChH
Q 004210 1 MSVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDD 80 (768)
Q Consensus 1 m~viGID~Gtt~s~va~~~~~~~~~i~~n~~~~r~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llg~~~~~~~ 80 (768)
|++||||||||||+||++.+|+ ++++.|+.|+|.+||+|+|.+++++||..|..+...+|.++++++||+||+.++++.
T Consensus 2 m~~iGIDlGTtns~va~~~~g~-~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 80 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRG-IDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPD 80 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTE-EEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTT
T ss_pred CcEEEEEcCCCcEEEEEEECCe-eEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHH
Confidence 6899999999999999999887 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHH
Q 004210 81 VQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDA 160 (768)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~A 160 (768)
++.+.+++||.++...+|.+.+.+.+.|+...++|+++++++|++|+..|+.+++.++.++|||||+||++.||+++++|
T Consensus 81 v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~A 160 (675)
T 3d2f_A 81 FEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADA 160 (675)
T ss_dssp HHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 99999999999999889999999999887788999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcceEeccchHHHHHHhhhcccCCCC--CCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHH
Q 004210 161 ATIAGLKPLRLMHDCTATALGYGIYKTDFSN--VGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEV 238 (768)
Q Consensus 161 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~--~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~ 238 (768)
+++|||++++|++||+|||++|++.+..++. ..+.++||||+||||||+|++++.+|.++|+++.|+.++||++||+.
T Consensus 161 a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~ 240 (675)
T 3d2f_A 161 ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240 (675)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHH
Confidence 9999999999999999999999987644332 45789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCcccEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHH
Q 004210 239 LSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIP 318 (768)
Q Consensus 239 l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~ 318 (768)
|++|+..+|..++++++..+++++.||+.+||++|+.||.+.++.+.+++++++.++.++|||++|+++|.++++++..+
T Consensus 241 l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~ 320 (675)
T 3d2f_A 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEP 320 (675)
T ss_dssp HHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHH
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998888899999989999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhhHhcCCccccceEEeeccce
Q 004210 319 CQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSPQYCVREFEVQDSFPF 398 (768)
Q Consensus 319 i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~~ls~~~~~~~~~~~d~~~~ 398 (768)
|+++|+.++++..+|+.|+||||+||+|+|++.|++.||.++..+.||++|||+|||++|+.+++.++++++.+.|++||
T Consensus 321 i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~Dv~p~ 400 (675)
T 3d2f_A 321 VTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPY 400 (675)
T ss_dssp HHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEEEECS
T ss_pred HHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEeeeec
Confidence 99999999999999999999999999999999999999988889999999999999999999999999999999999999
Q ss_pred eeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCceEEEEEEeccccCCCCCCCcceeEEecCCCCCCCCc-ceEE
Q 004210 399 SIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNGFQLQAFYADQNELPSVVSPQISSFMIGPFQTSHAET-ARVK 477 (768)
Q Consensus 399 ~i~i~~~~~~~~~~~~~~l~~~g~~~p~~k~~~f~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~-~~i~ 477 (768)
+||+++.++.. .+.+.+||++|+++|++++.+|++..++++.++|++...++.++|..||+|.|+|+|+++.|. ++|+
T Consensus 401 slgi~~~~~~~-~~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i~ 479 (675)
T 3d2f_A 401 SVSYSWDKQVE-DEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVK 479 (675)
T ss_dssp CEEEEECCTTC-SCSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEEE
T ss_pred ceEeeecCCCC-CcceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccccCceeeEEEecCcCCCCCCCcceEE
Confidence 99999987632 235899999999999999999999999999998866555554589999999999999988776 5999
Q ss_pred EEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeeeecccCCCCCH
Q 004210 478 VRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPVNENVNGGMTK 557 (768)
Q Consensus 478 v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i~~~~~~~ls~ 557 (768)
|+|.+|.||+|+|++++++++.+++ +.|.++++.+++|+... ++||+
T Consensus 480 v~f~id~~Gil~V~a~~~~~~~~~~--------------------------------~~~~t~~~~~i~i~~~~-~~ls~ 526 (675)
T 3d2f_A 480 LKLRCDPSGLHTIEEAYTIEDIEAG--------------------------------SDTKTVKKDDLTIVAHT-FGLDA 526 (675)
T ss_dssp EEEEECTTSCEEEEEEEEECC--------------------------------------CCCCEEEECEEEEEC-SSCCH
T ss_pred EEEEEcCCCcEEEEEEEEeeccccc--------------------------------ccccCcceeeEEEecCC-CCCCH
Confidence 9999999999999998776542210 01567788889988765 47999
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHhhccCCHHHHHHHHHHHHHHHHHHhhcCCCccHHHH
Q 004210 558 TELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIYRSFATESEREGISRNLRDTEEWLYEDGDDESENVY 637 (768)
Q Consensus 558 ~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~t~~e~~~l~~~l~~~~~WL~~~g~~a~~~~~ 637 (768)
++++++++++.+|..+|+.++++.++||+||+|||++|++|++.|..++++++++++...|+++++|||++++++++++|
T Consensus 527 ~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~ 606 (675)
T 3d2f_A 527 KKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKY 606 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHH
Confidence 99999999999999999999999999999999999999999877889999999999999999999999998888999999
Q ss_pred HHHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 004210 638 AERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVV 679 (768)
Q Consensus 638 ~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~ 679 (768)
++|+++|+++++||..|+.|++.||.+++.|++.|+++++++
T Consensus 607 ~~~~~~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~~~~~~~~ 648 (675)
T 3d2f_A 607 IAKYEELASLGNIIRGRYLAKEEEKKQAIRSKQEASQMAAMA 648 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=4.2e-98 Score=863.67 Aligned_cols=590 Identities=25% Similarity=0.464 Sum_probs=546.7
Q ss_pred Ce-EEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeC-CceeecHHHHhhhhhCCcchHhHHHHhcCCCCCC
Q 004210 1 MS-VVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSE-KQRFLGSAGAASAMMNPKSTISQVKRLLGRKFRE 78 (768)
Q Consensus 1 m~-viGID~Gtt~s~va~~~~~~~~~i~~n~~~~r~~Ps~v~~~~-~~~~~G~~A~~~~~~~p~~~~~~~k~llg~~~~~ 78 (768)
|+ |||||||||||+||++.+|. ++++.|..|+|++||+|+|.+ +++++|..|..++..+|.++++++|||||+.+++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~-~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d 79 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTT-PRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQD 79 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTE-EEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTS
T ss_pred CCcEEEEEcCCCcEEEEEEECCE-EEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCC
Confidence 54 99999999999999999888 899999999999999999975 5799999999999999999999999999999999
Q ss_pred hHHHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHH
Q 004210 79 DDVQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYL 158 (768)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~ 158 (768)
+.++.+.+++||.++..++|.+.+.+. + ..++|+++++++|++|++.++.+++.++.++|||||+||++.||++++
T Consensus 80 ~~v~~~~~~~p~~~~~~~~g~~~~~~~--~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~ 155 (605)
T 4b9q_A 80 EEVQRDVSIMPFKIIAADNGDAWVEVK--G--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATK 155 (605)
T ss_dssp HHHHHHHTTCSSEEEECTTSBEEEEET--T--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHhhcCCeEEEEcCCCceEEEEC--C--EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHH
Confidence 999999999999999988898877653 3 579999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeC----CeEEEEEEeCCCCCchhh
Q 004210 159 DAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYEN----GHMKILSHAFDESLGGRD 234 (768)
Q Consensus 159 ~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~----~~~~vl~~~~~~~lGG~~ 234 (768)
+|+++|||+++++++||+|||++|++... ..+.++||||+||||||+|++++.+ +.++++++.++.++||++
T Consensus 156 ~Aa~~AGl~v~~li~EP~AAAlaygl~~~----~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d 231 (605)
T 4b9q_A 156 DAGRIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGED 231 (605)
T ss_dssp HHHHHTTCEEEEEEEHHHHHHHHHHTTSC----CSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHH
T ss_pred HHHHHcCCceEEEeCcHHHHHHHhhhhcc----CCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHH
Confidence 99999999999999999999999998653 3468999999999999999999987 899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCcccEEEeccccC----cceEEEecHHHHHHHHHH
Q 004210 235 FDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNE----KDVKGFIRREEFEKLSSS 310 (768)
Q Consensus 235 ~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~----~d~~~~itr~~fe~~~~~ 310 (768)
||..|++|+..+|..+++.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+ .++.++|||++|+++|++
T Consensus 232 ~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~ 311 (605)
T 4b9q_A 232 FDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVED 311 (605)
T ss_dssp HHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998988877654 678899999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhhHhcCCccccce
Q 004210 311 LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSPQYCVREF 390 (768)
Q Consensus 311 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~~ls~~~~~~~~ 390 (768)
+++++..+++++|+++++...+|+.|+||||+||+|+|++.|++.||.++..+.||++|||+|||++|+.+++. ++++
T Consensus 312 ~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~--~~~~ 389 (605)
T 4b9q_A 312 LVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDV 389 (605)
T ss_dssp HHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTS--SCSE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCC--CCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986 5689
Q ss_pred EEeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCC
Q 004210 391 EVQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPF 466 (768)
Q Consensus 391 ~~~d~~~~~i~i~~~~~~~~~~~~~~l~~~g~~~p~~k~~~f~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~ 466 (768)
.+.|++|++||+++.++ .+.+||++|+++|++++.+|++..+ +.|.+++++.. ...+|..||+|.++++
T Consensus 390 ~l~dv~p~slgie~~~g-----~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~--~~~~n~~lg~~~l~~i 462 (605)
T 4b9q_A 390 LLLDVTPLSLGIETMGG-----VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERK--RAADNKSLGQFNLDGI 462 (605)
T ss_dssp EEECBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCS--BGGGSEEEEEEEEECC
T ss_pred EEEeeeeeEEEEEEcCC-----EEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEecccc--ccccCCEeeEEEEeCC
Confidence 99999999999999887 8999999999999999999987544 67777766433 3478999999999999
Q ss_pred CCCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeee
Q 004210 467 QTSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIP 546 (768)
Q Consensus 467 ~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~ 546 (768)
|+++.|.++|+|+|.+|.||+|+|++.+ +.++++..++
T Consensus 463 ~~~~~g~~~i~v~f~id~~gil~v~a~~------------------------------------------~~tg~~~~i~ 500 (605)
T 4b9q_A 463 NPAPRGMPQIEVTFDIDADGILHVSAKD------------------------------------------KNSGKEQKIT 500 (605)
T ss_dssp CCCSTTCCCEEEEEEECTTSCEEEEEEE------------------------------------------TTTCCEECCE
T ss_pred CCCcCCCceEEEEEEEcCCcEEEEEEEe------------------------------------------cCCCcEEEEE
Confidence 9999999999999999999999999863 4456677788
Q ss_pred eecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHhhccCCHHHHHHHHHHHHHHHHHHh
Q 004210 547 VNENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIYRSFATESEREGISRNLRDTEEWLY 626 (768)
Q Consensus 547 i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~t~~e~~~l~~~l~~~~~WL~ 626 (768)
|+... +||+++++++++++.++..+|+..+++.++||+||+|+|++|+.|++ +..++++++|+.+...++++++||+
T Consensus 501 i~~~~--~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~ 577 (605)
T 4b9q_A 501 IKASS--GLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALK 577 (605)
T ss_dssp EESCC--SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCC--CCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhCCHHHHHHHHHHHHHHHHHHh
Confidence 87664 79999999999999999999999999999999999999999999975 7889999999999999999999999
Q ss_pred hcCCCccHHHHHHHHHHHHHhHhHHHHhhHh
Q 004210 627 EDGDDESENVYAERLEDLKKLVDPIEGRYKD 657 (768)
Q Consensus 627 ~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 657 (768)
.+ +.++|++++++|++.+.||..++..
T Consensus 578 ~~----~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 578 GE----DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp SS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred cC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66 4789999999999999999988653
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=9.4e-97 Score=852.44 Aligned_cols=588 Identities=25% Similarity=0.463 Sum_probs=542.1
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEee-CCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChH
Q 004210 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFS-EKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDD 80 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~~~~i~~n~~~~r~~Ps~v~~~-~~~~~~G~~A~~~~~~~p~~~~~~~k~llg~~~~~~~ 80 (768)
.+||||||||||+||++.+|. ++++.|+.|+|++||+|+|. +++++||..|..+...+|.++++++||+||+.++++.
T Consensus 3 ~viGIDlGTt~s~va~~~~g~-~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTT-PRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTE-EEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred CEEEEEcCCcCEEEEEEECCE-EEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 489999999999999999887 89999999999999999995 4678999999999999999999999999999999999
Q ss_pred HHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHH
Q 004210 81 VQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDA 160 (768)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~A 160 (768)
++...+++||.++...+|.+.+.+ .| ..++|+++++++|+++++.|+.+++.++.++|||||+||++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~i~~--~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A 157 (605)
T 2kho_A 82 VQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHHHCSSCEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEECCCCceEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHH
Confidence 998889999999888889888776 44 57999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEee----CCeEEEEEEeCCCCCchhhHH
Q 004210 161 ATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYE----NGHMKILSHAFDESLGGRDFD 236 (768)
Q Consensus 161 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~----~~~~~vl~~~~~~~lGG~~~d 236 (768)
++.|||+++++++||+|||++|++... ..+.++||||+||||||+|++++. ++.++++++.++.++||++||
T Consensus 158 ~~~AGl~v~~li~EP~AAAlay~l~~~----~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D 233 (605)
T 2kho_A 158 GRIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFD 233 (605)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTTTSS----SSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTH
T ss_pred HHHcCCceEEEecCHHHHHHHhhhccc----CCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHH
Confidence 999999999999999999999997652 246889999999999999999998 789999999999999999999
Q ss_pred HHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCcccEEEeccccC----cceEEEecHHHHHHHHHHHH
Q 004210 237 EVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNE----KDVKGFIRREEFEKLSSSLL 312 (768)
Q Consensus 237 ~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~----~d~~~~itr~~fe~~~~~~~ 312 (768)
..|++|+.++|+++++.++..+++++.+|+.+||++|+.||.+.++.+.+++++++ .++.++|||++|+++|++++
T Consensus 234 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~ 313 (605)
T 2kho_A 234 SRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLV 313 (605)
T ss_dssp HHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTT
T ss_pred HHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998888998877653 56788999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhhHhcCCccccceEE
Q 004210 313 ERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSPQYCVREFEV 392 (768)
Q Consensus 313 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~~ls~~~~~~~~~~ 392 (768)
+++..+|+++|+++++...+|+.|+||||+||+|+|++.|++.||.++..+.||++|||+|||++|+.+++. ++++.+
T Consensus 314 ~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~--~~~~~l 391 (605)
T 2kho_A 314 NRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLL 391 (605)
T ss_dssp GGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTS--CCCCCC
T ss_pred HHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCC--ccCceE
Confidence 999999999999999999999999999999999999999999999889999999999999999999999876 678999
Q ss_pred eeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCCC
Q 004210 393 QDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQT 468 (768)
Q Consensus 393 ~d~~~~~i~i~~~~~~~~~~~~~~l~~~g~~~p~~k~~~f~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~~ 468 (768)
.|++|++||+++.++ .+.+||++|+++|++++.+|++..+ +.|.+++++. ....+|..||+|.++++|+
T Consensus 392 ~dv~p~slgi~~~~g-----~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~--~~~~~n~~lg~~~l~~i~~ 464 (605)
T 2kho_A 392 LDVTPLSLGIETMGG-----VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGER--KRAADNKSLGQFNLDGINP 464 (605)
T ss_dssp SBCCCCCEEEEETTT-----EEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSC--SBGGGSEEEEEEEEECCCS
T ss_pred EeeeeeeccccccCC-----ceEEEEecccccCccceEEEEecCCCceEEEEEEEeccC--cccccCcEEeEEEecCCCC
Confidence 999999999999887 8999999999999999999987443 6677766543 3347899999999999999
Q ss_pred CCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeeee
Q 004210 469 SHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPVN 548 (768)
Q Consensus 469 ~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i~ 548 (768)
++.|.++|+|+|.+|.||+|+|++.+ +.+++...++|+
T Consensus 465 ~~~g~~~i~v~f~id~~gil~v~a~~------------------------------------------~~tg~~~~i~i~ 502 (605)
T 2kho_A 465 APRGMPQIEVTFDIDADGILHVSAKD------------------------------------------KNSGKEQKITIK 502 (605)
T ss_dssp CCTTCSCEEEEEEECTTSCEEEEEEE------------------------------------------TTTCCEEEEEEC
T ss_pred CCCCCcEEEEEEEEcCCCceeEEEEE------------------------------------------cCCCceeecccc
Confidence 99999999999999999999999863 345566678887
Q ss_pred cccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHhhccCCHHHHHHHHHHHHHHHHHHhhc
Q 004210 549 ENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIYRSFATESEREGISRNLRDTEEWLYED 628 (768)
Q Consensus 549 ~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~t~~e~~~l~~~l~~~~~WL~~~ 628 (768)
.. .+||+++++++++++.+|..+|+..+++.++||+||+|+|++|+.|++ +..++++++|+.+...++++++||+++
T Consensus 503 ~~--~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~ 579 (605)
T 2kho_A 503 AS--SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALKGE 579 (605)
T ss_dssp TT--SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHTTSS
T ss_pred cc--cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 66 479999999999999999999999999999999999999999999977 888999999999999999999999843
Q ss_pred CCCccHHHHHHHHHHHHHhHhHHHHhhH
Q 004210 629 GDDESENVYAERLEDLKKLVDPIEGRYK 656 (768)
Q Consensus 629 g~~a~~~~~~~kl~~L~~~~~pi~~R~~ 656 (768)
+.++|++++++|+++++||..|+.
T Consensus 580 ----~~~~~~~~~~~l~~~~~~~~~~~~ 603 (605)
T 2kho_A 580 ----DKAAIEAKMQELAQVSQKLMEIAQ 603 (605)
T ss_dssp ----CHHHHHHHHHHHHTTCHHHHHHHC
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999999864
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=2.9e-91 Score=799.32 Aligned_cols=542 Identities=31% Similarity=0.540 Sum_probs=502.6
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChHH
Q 004210 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDDV 81 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~~~~i~~n~~~~r~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llg~~~~~~~~ 81 (768)
.+||||||||||+||++.+|. ++++.|+.|+|++||+|+|.+++++||..|..+...+|.++++++|||||+.++++.+
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~-~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 83 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGK-VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSS-EEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHH
T ss_pred CEEEEEeCcccEEEEEEECCE-EEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHH
Confidence 489999999999999998887 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHHH
Q 004210 82 QKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDAA 161 (768)
Q Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~Aa 161 (768)
+..++++||.++.. +|.+.+.+.+.+....++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 84 ~~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~ 162 (554)
T 1yuw_A 84 QSDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162 (554)
T ss_dssp HHHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 99999999999854 78889999998888899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHH
Q 004210 162 TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSS 241 (768)
Q Consensus 162 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~ 241 (768)
+.|||+++++++||+|||++|++.... ..+.++||||+||||||+|++++.++.++++++.++.++||++||+.|++
T Consensus 163 ~~AGl~~~~li~EP~AAAlay~~~~~~---~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~ 239 (554)
T 1yuw_A 163 TIAGLNVLRIINEPTAAAIAYGLDKKV---GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVN 239 (554)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTCSTTC---SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHcCCCeEEEeCcHHHHHHHHHhhccC---CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHH
Confidence 999999999999999999999976531 24688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCcccEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHHH
Q 004210 242 YFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQK 321 (768)
Q Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~ 321 (768)
|+..+|.++++.++..+++++.+|+.+||++|+.||.+.++.+.+++++++.++...|+|++|+++++++++++..+|++
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~ 319 (554)
T 1yuw_A 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEK 319 (554)
T ss_dssp HHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHH
T ss_pred HHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999899999999999999999999999888999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcC-CCCCCcCChhhHHHhHHHHHhhHhcC--CccccceEEeeccce
Q 004210 322 ALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFN-REPGRTINASECVARGCALQCAMLSP--QYCVREFEVQDSFPF 398 (768)
Q Consensus 322 ~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg-~~v~~~~n~~eava~Gaa~~a~~ls~--~~~~~~~~~~d~~~~ 398 (768)
+|+++++...+|+.|+|+||+||+|+|++.|++.|+ .++..+.||++|||+|||++|+.+++ .++++++.+.|++|+
T Consensus 320 ~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~ 399 (554)
T 1yuw_A 320 ALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPL 399 (554)
T ss_dssp HHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSS
T ss_pred HHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeee
Confidence 999999999999999999999999999999999995 88889999999999999999999988 467889999999999
Q ss_pred eeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecC--c--eEEEEEEeccccCCCCCCCcceeEEecCCCCCCCCcc
Q 004210 399 SIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSN--G--FQLQAFYADQNELPSVVSPQISSFMIGPFQTSHAETA 474 (768)
Q Consensus 399 ~i~i~~~~~~~~~~~~~~l~~~g~~~p~~k~~~f~~~~--~--~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 474 (768)
+||+++.++ .+.+||++|+++|.+++.+|.+.. + +.|.+++++.. ...+|..||+|.|.++|+.+.|.+
T Consensus 400 slgi~~~~g-----~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~--~~~~n~~lg~~~l~~i~~~~~g~~ 472 (554)
T 1yuw_A 400 SLGIETAGG-----VMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERA--MTKDNNLLGKFELTGIPPAPRGVP 472 (554)
T ss_dssp CEEEEETTT-----EEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSS--BGGGSEEEEEEEEECCCCCSTTCC
T ss_pred EEEEEecCc-----eEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCcc--ccccCcEEEEEEEeCCCCCccccc
Confidence 999999877 899999999999999999998743 2 67777665433 346889999999999999999999
Q ss_pred eEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeeeecccCCC
Q 004210 475 RVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPVNENVNGG 554 (768)
Q Consensus 475 ~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i~~~~~~~ 554 (768)
+|+|+|.+|.||+|+|++.+ +.++++..++|+... ++
T Consensus 473 ~i~v~f~id~~gil~v~a~~------------------------------------------~~tg~~~~~~i~~~~-~~ 509 (554)
T 1yuw_A 473 QIEVTFDIDANGILNVSAVD------------------------------------------KSTGKENKITITNDK-GR 509 (554)
T ss_dssp CEEEEEEECTTCCEEEEEEE------------------------------------------TTTCCEEEEEECCCS-SC
T ss_pred EEEEEEEEccCceEEEEEEe------------------------------------------ccCCCceeEEEecCC-CC
Confidence 99999999999999999863 344556677887664 57
Q ss_pred CCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHH
Q 004210 555 MTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKI 598 (768)
Q Consensus 555 ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l 598 (768)
||+++++++++++.+|..+|+.++++.++||+||+|+|++|++|
T Consensus 510 ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 510 LSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp SCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred CCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999998765
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1.3e-80 Score=706.06 Aligned_cols=499 Identities=28% Similarity=0.497 Sum_probs=450.6
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChHH
Q 004210 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDDV 81 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~~~~i~~n~~~~r~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llg~~~~~~~~ 81 (768)
.+||||||||||+||++.+|. ++++.|+.|++++||+|+|.+++++||..|..+...+| ++++++||+||+.+
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~-~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~----- 75 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGE-VKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDY----- 75 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTE-EEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCC-----
T ss_pred CEEEEEcCCceEEEEEEECCE-EEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCc-----
Confidence 489999999999999999887 89999999999999999998778999999999999999 99999999999743
Q ss_pred HhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHHH
Q 004210 82 QKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDAA 161 (768)
Q Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~Aa 161 (768)
.+ ...| ..++|+++++++|++|+..++.+++.++..+|||||++|++.||+++++|+
T Consensus 76 ---------~~------------~~~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~ 132 (509)
T 2v7y_A 76 ---------KV------------EIEG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAG 132 (509)
T ss_dssp ---------CE------------EETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred ---------EE------------EECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 21 1123 368999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHH
Q 004210 162 TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSS 241 (768)
Q Consensus 162 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~ 241 (768)
+.||++++++++||+|||++|+... ..+.++||||+||||||++++++.++.++++++.++.++||++||+.|++
T Consensus 133 ~~AGl~~~~li~Ep~AAAlay~~~~-----~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~ 207 (509)
T 2v7y_A 133 RIAGLEVERIINEPTAAALAYGLDK-----EEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIID 207 (509)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTGGG-----SCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHcCCCeEEEecCHHHHHHHHhhcc-----CCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999865 35789999999999999999999989999999999999999999999999
Q ss_pred HHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCcccEEEeccccC----cceEEEecHHHHHHHHHHHHHHHHH
Q 004210 242 YFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNE----KDVKGFIRREEFEKLSSSLLERMRI 317 (768)
Q Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~----~d~~~~itr~~fe~~~~~~~~~i~~ 317 (768)
|+.++|.++++.++..+++++.+|+.+||++|+.||.+..+.+.+++++++ .++.++|+|++|+++++|+++++..
T Consensus 208 ~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~ 287 (509)
T 2v7y_A 208 YLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMG 287 (509)
T ss_dssp HHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHH
T ss_pred HHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHH
Confidence 999999999998988899999999999999999999988888888877652 4677899999999999999999999
Q ss_pred HHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhhHhcCCccccceEEeeccc
Q 004210 318 PCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSPQYCVREFEVQDSFP 397 (768)
Q Consensus 318 ~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~~ls~~~~~~~~~~~d~~~ 397 (768)
+++++|+++++...+|+.|+|+||+||+|+|++.|++.||.++..+.||++|||+|||++|+.+++. ++++.+.|++|
T Consensus 288 ~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~--~~~~~~~dv~p 365 (509)
T 2v7y_A 288 PVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGE--VKDVVLLDVTP 365 (509)
T ss_dssp HHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTC--CCCCCCCCBCS
T ss_pred HHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCC--ccCceEEEeec
Confidence 9999999999998999999999999999999999999999888999999999999999999999876 57899999999
Q ss_pred eeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCCCCCCCc
Q 004210 398 FSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQTSHAET 473 (768)
Q Consensus 398 ~~i~i~~~~~~~~~~~~~~l~~~g~~~p~~k~~~f~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~ 473 (768)
++||+++.++ .+.+||++|+++|++++.+|++..+ +.|.+++++. ....+|..||+|.++++|+.+.|.
T Consensus 366 ~slgi~~~~~-----~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~--~~~~~~~~lg~~~l~~i~~~~~g~ 438 (509)
T 2v7y_A 366 LSLGIETMGG-----VFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGER--PMAADNKSLGRFQLTGIPPAPRGV 438 (509)
T ss_dssp SEEEEEETTT-----EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESS--SBGGGSEEEEEEEEECCCCCCTTC
T ss_pred cccceeecCC-----ceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCc--cccccCcEEEEEEEeCCCCCCCcc
Confidence 9999999887 8999999999999999999987433 6777776643 234688999999999999998898
Q ss_pred ceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeeeecccCC
Q 004210 474 ARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPVNENVNG 553 (768)
Q Consensus 474 ~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i~~~~~~ 553 (768)
++|+|+|.+|.||+|+|++.+ +.++++..++|+.. .
T Consensus 439 ~~i~v~f~id~~gil~v~a~~------------------------------------------~~~g~~~~~~i~~~--~ 474 (509)
T 2v7y_A 439 PQIEVTFDIDANGIVHVRAKD------------------------------------------LGTNKEQSITIKSS--S 474 (509)
T ss_dssp SCEEEEEEECTTSCEEEEEEE------------------------------------------TTTCCEEEEEECSS--C
T ss_pred cEEEEEEEEcCCceEEEEEEE------------------------------------------cCCCcEEEEEEEec--C
Confidence 999999999999999999863 34556667788776 4
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHH
Q 004210 554 GMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALE 588 (768)
Q Consensus 554 ~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LE 588 (768)
+||+++++++++++.+|..+|+..+++.++||+||
T Consensus 475 ~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 475 GLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp SCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred CCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 79999999999999999999999999999999997
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=3.1e-64 Score=558.29 Aligned_cols=380 Identities=36% Similarity=0.618 Sum_probs=360.7
Q ss_pred CeEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChH
Q 004210 1 MSVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDD 80 (768)
Q Consensus 1 m~viGID~Gtt~s~va~~~~~~~~~i~~n~~~~r~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llg~~~~~~~ 80 (768)
|.+||||||||||+||++.+|. ++++.|+.|++++||+|+|.+++++||..|..+..++|.++++++||+||+.++++.
T Consensus 23 ~~viGID~GTt~s~va~~~~g~-~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~ 101 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQHGK-VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDAT 101 (404)
T ss_dssp CCCEEEEECSSEEEEEEEETTE-EEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHH
T ss_pred CCEEEEEcCCccEEEEEEECCe-eEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHH
Confidence 5799999999999999999888 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHH
Q 004210 81 VQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDA 160 (768)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~A 160 (768)
++...+.+||.+.. .+|...+.+.+.++...++|+++++++|+++++.++.+++.++..+|||||++|++.||+++++|
T Consensus 102 ~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a 180 (404)
T 3i33_A 102 VQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDA 180 (404)
T ss_dssp HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHH
Confidence 99999999999986 57889999999888889999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHH
Q 004210 161 ATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLS 240 (768)
Q Consensus 161 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~ 240 (768)
++.||++++++++||+|||++|+..... ....+..++|||+||||||++++++.++.++++++.++..+||.+||+.|+
T Consensus 181 ~~~AGl~~~~li~Ep~AAa~~~~~~~~~-~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 259 (404)
T 3i33_A 181 GTITGLNVLRIINEPTAAAIAYGLDKKG-CAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 259 (404)
T ss_dssp HHHHTCEEEEEEEHHHHHHHHTTTTSSC-SSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HHHcCCCeEEEeccHHHHHHHHHhhccc-ccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 9999999999999999999999876531 112578999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCcccEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHH
Q 004210 241 SYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQ 320 (768)
Q Consensus 241 ~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~ 320 (768)
+++.++|..+++.++..+++.+.+|+.+||++|+.||.+....+.++.++++.++.+.|+|++|+++++++++++..+|.
T Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~ 339 (404)
T 3i33_A 260 SHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVE 339 (404)
T ss_dssp HHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHH
T ss_pred HHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhc-CCCCCCcCChhhHHHhHHHHHhhHhcC
Q 004210 321 KALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF-NREPGRTINASECVARGCALQCAMLSP 383 (768)
Q Consensus 321 ~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f-g~~v~~~~n~~eava~Gaa~~a~~ls~ 383 (768)
++|+.+++...+|+.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|+++++
T Consensus 340 ~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 340 KALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999 688889999999999999999999875
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.4e-62 Score=543.60 Aligned_cols=374 Identities=35% Similarity=0.606 Sum_probs=358.0
Q ss_pred EEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChHHH
Q 004210 3 VVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDDVQ 82 (768)
Q Consensus 3 viGID~Gtt~s~va~~~~~~~~~i~~n~~~~r~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llg~~~~~~~~~ 82 (768)
+||||||||||+||++.+|. ++++.|..|++++||+|+|.++++++|..|......+|.++++++|++||+.++++.++
T Consensus 20 viGID~GTt~s~va~~~~g~-~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 98 (394)
T 3qfu_A 20 VIGIDLGTTYSCVAVMKNGK-TEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQ 98 (394)
T ss_dssp CEEEEECSSEEEEEEECSSC-EEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHH
T ss_pred EEEEEeCcCcEEEEEEECCe-eEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHH
Confidence 69999999999999999888 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 004210 83 KDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDAAT 162 (768)
Q Consensus 83 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~Aa~ 162 (768)
...+++||.+. ..+|...+.+.+.++...++|+++++++|+++++.++.+++.++..+|||||++|++.||+++++|++
T Consensus 99 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~ 177 (394)
T 3qfu_A 99 KDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGT 177 (394)
T ss_dssp HHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 99999999988 56788899999888888999999999999999999999999999999999999999999999999999
Q ss_pred HcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHH
Q 004210 163 IAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSY 242 (768)
Q Consensus 163 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~ 242 (768)
.||++++++++||+|||++|+.... ..+.+++|||+||||||++++++.++.+++++..++..+||.+||+.|+++
T Consensus 178 ~aGl~~~~li~Ep~Aaa~~~~~~~~----~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~ 253 (394)
T 3qfu_A 178 IAGLNVLRIVNEPTAAAIAYGLDKS----DKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQ 253 (394)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTTTSC----SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HcCCceEEEecCHHHHHHHHhhccC----CCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHH
Confidence 9999999999999999999987653 357899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCcccEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHHHH
Q 004210 243 FAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQKA 322 (768)
Q Consensus 243 l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~ 322 (768)
+..+|..+++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++...++|++|+++++++++++..+|.++
T Consensus 254 l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~ 333 (394)
T 3qfu_A 254 LIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKV 333 (394)
T ss_dssp HHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhc-CCCCCCcCChhhHHHhHHHHHhhHhc
Q 004210 323 LAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF-NREPGRTINASECVARGCALQCAMLS 382 (768)
Q Consensus 323 l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f-g~~v~~~~n~~eava~Gaa~~a~~ls 382 (768)
|+.+++...+|+.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|+++|
T Consensus 334 l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 334 LQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999999889999999999999999999999999 78899999999999999999999875
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.8e-62 Score=544.77 Aligned_cols=378 Identities=24% Similarity=0.398 Sum_probs=344.1
Q ss_pred CeEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChH
Q 004210 1 MSVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDD 80 (768)
Q Consensus 1 m~viGID~Gtt~s~va~~~~~~~~~i~~n~~~~r~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llg~~~~~~~ 80 (768)
|.+||||||||||+||++.+|. ++++.|..|++++||+|+|.++++++|..|..+..++|.+++.++|+++|+.++++.
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~-~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~ 91 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDK-AEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVD 91 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTE-EEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCc-eEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchh
Confidence 3699999999999999996665 999999999999999999999999999999999999999999999999999988776
Q ss_pred HHhhhccCCceeeecCCCCEEEEEEec----CceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHH
Q 004210 81 VQKDLKLFPFETCESHDGGILIMLEYL----GETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRA 156 (768)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~----~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~ 156 (768)
++.. ..++.+. ..+|.+.+.+... +....++++++++++|++|++.++.+++.++.++|||||++|++.||++
T Consensus 92 ~~~~--~~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~ 168 (409)
T 4gni_A 92 PTHN--HASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAA 168 (409)
T ss_dssp CGGG--TTSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHH
T ss_pred hhhh--cccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHH
Confidence 5443 3344443 3478888888765 4567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHH
Q 004210 157 YLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFD 236 (768)
Q Consensus 157 l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d 236 (768)
+++|++.|||+++++++||+|||++|+.... ....+..+||||+||||||++++++.++.++++++.++..+||.+||
T Consensus 169 ~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~--~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d 246 (409)
T 4gni_A 169 LIAAAAAADLEVLQLISEPAAAVLAYDARPE--ATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALD 246 (409)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHTTC--------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHH
T ss_pred HHHHHHHcCCCeEEEEcCHHHHHHHHhcccc--cCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHH
Confidence 9999999999999999999999999987642 12467899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcc--cCccCChHHHHHHHHHHHHHhhhccCCCcccEEEeccccCcceEEEecHHHHHHHHHHHHHH
Q 004210 237 EVLSSYFAAQFKQQYD--IDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLER 314 (768)
Q Consensus 237 ~~l~~~l~~~~~~~~~--~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~ 314 (768)
+.|++++..+|..+++ .+...+++.+.+|+.+||++|+.||.+..+.+.++++.++.++...|||++|++++++++++
T Consensus 247 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~ 326 (409)
T 4gni_A 247 KVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEG 326 (409)
T ss_dssp HHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHH
Confidence 9999999999999888 88888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCC--C------CCcCChhhHHHhHHHHHhhHhcCC
Q 004210 315 MRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNRE--P------GRTINASECVARGCALQCAMLSPQ 384 (768)
Q Consensus 315 i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~--v------~~~~n~~eava~Gaa~~a~~ls~~ 384 (768)
+..+|+++|+.+++...+|+.|+|+||+|++|+|++.|++.||.+ + ....||++|||+|||++|+.....
T Consensus 327 i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 327 FNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 999999999999999999999999999999999999999999865 3 678999999999999999987654
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.8e-60 Score=524.32 Aligned_cols=372 Identities=31% Similarity=0.561 Sum_probs=342.4
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeC-CceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChH
Q 004210 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSE-KQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDD 80 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~~~~i~~n~~~~r~~Ps~v~~~~-~~~~~G~~A~~~~~~~p~~~~~~~k~llg~~~~~~~ 80 (768)
.+||||||||||+||++.+|. ++++.|+.|.+++||+|+|.. ++++||..|......+|.++++++|++||+.++++.
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~-~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 81 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTT-PRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTE-EEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHH
T ss_pred cEEEEEcCCCCEEEEEEECCe-eEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHH
Confidence 489999999999999999887 899999999999999999964 568999999999999999999999999999999999
Q ss_pred HHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHH
Q 004210 81 VQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDA 160 (768)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~A 160 (768)
++...+.+||.++...+|.+.+.+ +| ..++++++++++|+++++.++.+++.++..+|||||++|++.||+++++|
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 157 (383)
T 1dkg_D 82 VQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (383)
T ss_dssp HHHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 988888999999888888877766 34 47999999999999999999998888899999999999999999999999
Q ss_pred HHHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEee----CCeEEEEEEeCCCCCchhhHH
Q 004210 161 ATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYE----NGHMKILSHAFDESLGGRDFD 236 (768)
Q Consensus 161 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~----~~~~~vl~~~~~~~lGG~~~d 236 (768)
++.||++++.+++||+|||++|+.... ..+..+||||+||||||++++++. ++.++++++.++..+||++||
T Consensus 158 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~----~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id 233 (383)
T 1dkg_D 158 GRIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFD 233 (383)
T ss_dssp HHHTTCEESCCCBHHHHHHHHHTCCC-----CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHH
T ss_pred HHHcCCceEEEeccHHHHHHHHHhccC----CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHH
Confidence 999999999999999999999987542 256789999999999999999998 578899998888999999999
Q ss_pred HHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCcccEEEecccc---C-cceEEEecHHHHHHHHHHHH
Q 004210 237 EVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMN---E-KDVKGFIRREEFEKLSSSLL 312 (768)
Q Consensus 237 ~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~---~-~d~~~~itr~~fe~~~~~~~ 312 (768)
+.|++++.++|..+++.++..+++.+.+|+.+||++|+.||......+.++.+++ | .++.+.|+|++|+++++|++
T Consensus 234 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~ 313 (383)
T 1dkg_D 234 SRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLV 313 (383)
T ss_dssp HHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHH
Confidence 9999999999999888888888999999999999999999988888888877654 2 45678999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhhHhc
Q 004210 313 ERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLS 382 (768)
Q Consensus 313 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~~ls 382 (768)
+++..+|+++|+++++...+|+.|+|+||+|++|+|++.|++.||.++..+.||++|||+|||++|++++
T Consensus 314 ~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 314 NRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999999999999888999999999999999999999999998888999999999999999998764
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=2.1e-40 Score=358.80 Aligned_cols=309 Identities=22% Similarity=0.318 Sum_probs=241.8
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCC--ce-eecHHHHhhhhhCCcchHhHHHHhcCCCCCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEK--QR-FLGSAGAASAMMNPKSTISQVKRLLGRKFRE 78 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~~~~i~~n~~~~r~~Ps~v~~~~~--~~-~~G~~A~~~~~~~p~~~~~~~k~llg~~~~~ 78 (768)
.+|||||||+||++++..+ + ++. .+||+|+|..+ .+ ++|.+|.....++|.++..
T Consensus 4 ~~igIDlGT~~s~v~~~~~-~---~~~------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~------------ 61 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGK-G---IVV------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA------------ 61 (344)
T ss_dssp CEEEEEECSSEEEEEETTT-E---EEE------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE------------
T ss_pred ceEEEEcCcCcEEEEECCC-C---EEE------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE------------
Confidence 5899999999999987432 2 222 27999999865 34 7999998766666655421
Q ss_pred hHHHhhhccCCceeeecCCCCEEEEEEecCceeEe-cHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHH
Q 004210 79 DDVQKDLKLFPFETCESHDGGILIMLEYLGETHKF-TPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAY 157 (768)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l 157 (768)
..|+. +|.+ ..+ .+++++++++++++.. ..++ ...+|||||++|++.||+++
T Consensus 62 --------~~p~~-----~g~i----------~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~ 114 (344)
T 1jce_A 62 --------IRPMR-----DGVI----------ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAI 114 (344)
T ss_dssp --------ECCEE-----TTEE----------SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHH
T ss_pred --------EecCC-----CCee----------CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHH
Confidence 11221 2321 123 3677778777776542 1233 47899999999999999999
Q ss_pred HHHHHHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHH
Q 004210 158 LDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDE 237 (768)
Q Consensus 158 ~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~ 237 (768)
++|++.||++++.+++||+|||++|+... ..+..++|||+||||||++++... . ++. .++..+||++||+
T Consensus 115 ~~a~~~aG~~~~~li~ep~Aaa~~~~~~~-----~~~~~~lVvDiGggttdvsv~~~~--~--~~~-~~~~~lGG~~id~ 184 (344)
T 1jce_A 115 LDAGLEAGASKVFLIEEPMAAAIGSNLNV-----EEPSGNMVVDIGGGTTEVAVISLG--S--IVT-WESIRIAGDEMDE 184 (344)
T ss_dssp HHHHHHTTCSEEEEEEHHHHHHHHTTCCT-----TSSSCEEEEEECSSCEEEEEEETT--E--EEE-EEEESCSHHHHHH
T ss_pred HHHHHHcCCCeEeccCCHHHHHHhcCCCC-----CCCceEEEEEeCCCeEEEEEEEcC--C--EEe-eCCCCccChhHHH
Confidence 99999999999999999999999998643 346789999999999999999875 2 222 3478899999999
Q ss_pred HHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCc------ccEEEe--ccccCcceEEEecHHHHHHHHH
Q 004210 238 VLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAE------APLNIE--CLMNEKDVKGFIRREEFEKLSS 309 (768)
Q Consensus 238 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~------~~i~i~--~l~~~~d~~~~itr~~fe~~~~ 309 (768)
.|++++.+++. .++. ...||++|+.|+.... ..+.+. .+.++.++.++|+|++|+++++
T Consensus 185 ~l~~~l~~~~~----~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~ 251 (344)
T 1jce_A 185 AIVQYVRETYR----VAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALR 251 (344)
T ss_dssp HHHHHHHHHHC----EECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTH
T ss_pred HHHHHHHHHhC----cccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHH
Confidence 99999987653 3222 3789999999986542 234443 3456777889999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCC--CCCc-CEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhhHhc
Q 004210 310 SLLERMRIPCQKALAGSGLN--VEKI-HSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLS 382 (768)
Q Consensus 310 ~~~~~i~~~i~~~l~~~~~~--~~~i-~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~~ls 382 (768)
|+++++...|+++|+.++.. .+.+ +.|+|+||+|++|+|++.|++.|+.++....||+++||+||+++|+.++
T Consensus 252 ~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 252 SVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 99999999999999987532 2224 6899999999999999999999998888889999999999999998665
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=9.1e-33 Score=274.10 Aligned_cols=211 Identities=14% Similarity=0.269 Sum_probs=190.6
Q ss_pred EEeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCC
Q 004210 391 EVQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPF 466 (768)
Q Consensus 391 ~~~d~~~~~i~i~~~~~~~~~~~~~~l~~~g~~~p~~k~~~f~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~ 466 (768)
++.|++|++||+++.+| .+.+|||||+++|++++.+|++..| +.|.+++++. ..+.+|..||+|.|.|+
T Consensus 2 ~l~DV~p~slGie~~gg-----~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~--~~~~dn~~Lg~f~l~gi 74 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGG-----VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGER--KRAADNKSLGQFNLDGI 74 (219)
T ss_dssp CCCCBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSC--SBGGGSEEEEEEEEECC
T ss_pred eEEEecCcEEEEEEeCC-----EEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCC--cccccCCEEEEEEEeCC
Confidence 57899999999999987 8999999999999999999998554 7788765443 33589999999999999
Q ss_pred CCCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeee
Q 004210 467 QTSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIP 546 (768)
Q Consensus 467 ~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~ 546 (768)
|+++.|.++|+|+|.+|.||+|+|++.+ +.++++..++
T Consensus 75 pp~p~G~~~IeVtf~iD~nGiL~V~a~d------------------------------------------~~tg~~~~i~ 112 (219)
T 4e81_A 75 NPAPRGMPQIEVTFDIDADGILHVSAKD------------------------------------------KNSGKEQKIT 112 (219)
T ss_dssp CCCSTTCSCEEEEEEECTTCCEEEEEEE------------------------------------------TTTCCEEEEE
T ss_pred CCCCCCCceEEEEEEeCCCCCEeeeeec------------------------------------------cccCccceEe
Confidence 9999999999999999999999999974 5677788899
Q ss_pred eecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHhhccCCHHHHHHHHHHHHHHHHHHh
Q 004210 547 VNENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIYRSFATESEREGISRNLRDTEEWLY 626 (768)
Q Consensus 547 i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~t~~e~~~l~~~l~~~~~WL~ 626 (768)
|+.. .+||.++++++++++.++..+|+..+++.++||.||+|+|++|..|.+ +..++++++|+.|...++++++||+
T Consensus 113 I~~~--~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~~l~~-~~~~l~~~~k~~i~~~l~~~~~~L~ 189 (219)
T 4e81_A 113 IKAS--SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALK 189 (219)
T ss_dssp ECTT--CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred eecc--ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhCCHHHHHHHHHHHHHHHHHHh
Confidence 9875 369999999999999999999999999999999999999999999986 7889999999999999999999999
Q ss_pred hcCCCccHHHHHHHHHHHHHhHhHHHHhhHh
Q 004210 627 EDGDDESENVYAERLEDLKKLVDPIEGRYKD 657 (768)
Q Consensus 627 ~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 657 (768)
++ +.++|++++++|+.++.||..|++.
T Consensus 190 ~~----~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 190 GE----DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp SS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred cC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 76 5889999999999999999999876
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=1.9e-31 Score=267.65 Aligned_cols=210 Identities=15% Similarity=0.272 Sum_probs=187.0
Q ss_pred eeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCCC
Q 004210 393 QDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQT 468 (768)
Q Consensus 393 ~d~~~~~i~i~~~~~~~~~~~~~~l~~~g~~~p~~k~~~f~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~~ 468 (768)
.|++||+|||++.++ .+.+||++|+++|++++.+|++..+ +.|.++|++.. .+.+|..||+|.|+|+++
T Consensus 1 ~Dv~p~slGie~~~g-----~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~--~~~~n~~Lg~f~l~gi~~ 73 (227)
T 1u00_A 1 MDVIPLSLGLETMGG-----LVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERE--LVQDCRSLARFALRGIPA 73 (227)
T ss_dssp CCBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSS--BGGGSEEEEEEEECCCCC
T ss_pred CCcccceEEEEEeCC-----EEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCc--cCCCCCEEEEEEEeCCCC
Confidence 389999999999887 8999999999999999999997543 78888876532 347899999999999999
Q ss_pred CCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeeee
Q 004210 469 SHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPVN 548 (768)
Q Consensus 469 ~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i~ 548 (768)
++.|.++|+|+|++|.||+|+|++.+ +.++++..++|+
T Consensus 74 ~p~G~~~I~Vtf~iD~nGiL~V~a~d------------------------------------------~~tg~~~~i~i~ 111 (227)
T 1u00_A 74 LPAGGAHIRVTFQVDADGLLSVTAME------------------------------------------KSTGVEASIQVK 111 (227)
T ss_dssp CSTTCSCEEEEEEECTTCCEEEEEEE------------------------------------------TTTCCEEEEEEC
T ss_pred CCCCceEEEEEEEECCCCcEEEEeec------------------------------------------ccccccceEEEE
Confidence 99999999999999999999998863 334556678887
Q ss_pred cccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHhhccCCHHHHHHHHHHHHHHHHHHhhc
Q 004210 549 ENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIYRSFATESEREGISRNLRDTEEWLYED 628 (768)
Q Consensus 549 ~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~t~~e~~~l~~~l~~~~~WL~~~ 628 (768)
.. .+||.++++++.+++.+|..+|+..+++.++||+||+|||++|+.|.+ +..++++++|+.+...|+++++|||++
T Consensus 112 ~~--~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l~~-~~~~~~~~~k~~i~~~l~~~~~wl~~~ 188 (227)
T 1u00_A 112 PS--YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAA-DAALLSAAERQVIDDAAAHLSEVAQGD 188 (227)
T ss_dssp CC--SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHTTSS
T ss_pred ec--cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 66 369999999999999999999999999999999999999999999976 788999999999999999999999954
Q ss_pred CCCccHHHHHHHHHHHHHhHhHHHHhhHhH
Q 004210 629 GDDESENVYAERLEDLKKLVDPIEGRYKDE 658 (768)
Q Consensus 629 g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~ 658 (768)
++++|++++++|++++.||..|+...
T Consensus 189 ----d~~~~~~~~~~L~~~~~~i~~r~~~~ 214 (227)
T 1u00_A 189 ----DVDAIEQAIKNVDKQTQDFAARRMDQ 214 (227)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999987643
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=4.6e-28 Score=260.78 Aligned_cols=227 Identities=19% Similarity=0.193 Sum_probs=169.7
Q ss_pred ecHHHHHHHHHHHHHHHHHhhccCCCCeEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CcceEeccchH
Q 004210 113 FTPVQILGMLLSNLKQITEKNIKIPISNCV--IGVPCYLTDVQRRAYLDAATIA--------G------LKPLRLMHDCT 176 (768)
Q Consensus 113 ~~~~el~a~~L~~l~~~a~~~~~~~~~~~V--itVP~~~~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep~ 176 (768)
+..+...++++..|+..++...+.. .++| |+||++|+..||+++++++..+ | +..+.+++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 4446677777777776543232333 5699 9999999999999999997765 4 35588999999
Q ss_pred HHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhccc--C
Q 004210 177 ATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDI--D 254 (768)
Q Consensus 177 Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~--~ 254 (768)
|||++| +.... ..+...+++|||+||||||++++++.++. .+.+..++..+||.+|++.|++++.+++ +. +
T Consensus 174 AAa~~~-l~~~~-~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~----g~~~~ 246 (346)
T 2fsj_A 174 GAALYL-LNQGI-IEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKET----GFVVP 246 (346)
T ss_dssp HHHHHH-HHHTS-SCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHH----CCCCC
T ss_pred HHHHHh-hcccc-ccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHh----CCCcC
Confidence 999998 22211 11234789999999999999999987766 4555456789999999999998877654 44 2
Q ss_pred ccCChHHHHHHHHHHHHHhhhccCCCcccEEEeccccCcceEEEecHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 004210 255 VYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEF-EKLSSSLLERMRIPCQKALAGSGLNVEKI 333 (768)
Q Consensus 255 ~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~f-e~~~~~~~~~i~~~i~~~l~~~~~~~~~i 333 (768)
+.. ..++ ....+.+ .+. .++++++ +++++++++++...|+++|+++ .+++
T Consensus 247 i~~---------~~~e---------~~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i 297 (346)
T 2fsj_A 247 FDL---------AQEA---------LSHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRV 297 (346)
T ss_dssp HHH---------HHHH---------TTSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGE
T ss_pred CCH---------HHHh---------cCCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcc
Confidence 221 1222 0112322 232 3569999 9999999999999999999876 4578
Q ss_pred CEEEEecCCCChHHHHHHHHhhcCCCCCC---cCChhhHHHhHHHHHhh
Q 004210 334 HSVELVGSGSRIPAISRMLNSLFNREPGR---TINASECVARGCALQCA 379 (768)
Q Consensus 334 ~~V~LvGG~srip~v~~~l~~~fg~~v~~---~~n~~eava~Gaa~~a~ 379 (768)
+.|+|+||++++ +++.|++.|+. +.. ..||++|+|+|+..++.
T Consensus 298 ~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 298 TSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 999999999999 99999999973 334 67999999999997764
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.94 E-value=3.4e-27 Score=258.43 Aligned_cols=317 Identities=17% Similarity=0.190 Sum_probs=205.8
Q ss_pred EEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChHHH
Q 004210 3 VVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDDVQ 82 (768)
Q Consensus 3 viGID~Gtt~s~va~~~~~~~~~i~~n~~~~r~~Ps~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llg~~~~~~~~~ 82 (768)
++|||+||++++++++..|. +.+ +..|.+.+|+.+. ......++..+...+|+++++.-.
T Consensus 15 ~vgiDiGt~~i~~~~~~~~~-~~i--~~~g~~~~ps~~~------------~~g~i~d~~~~~~~ik~~~~~~~~----- 74 (377)
T 2ych_A 15 ALGLEIGASALKLVEVSGNP-PAL--KALASRPTPPGLL------------MEGMVAEPAALAQEIKELLLEART----- 74 (377)
T ss_dssp CEEEEECSSEEEEEEEETTT-TEE--EEEEEEECCTTSE------------ETTEESCHHHHHHHHHHHHHHHTC-----
T ss_pred eEEEEeCCCeEEEEEEeCCc-eEE--EEEEeEECCCCcc------------cCCCcCCHHHHHHHHHHHHHHcCC-----
Confidence 78999999999999987665 444 2334445555321 112345667778888888874100
Q ss_pred hhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHH---------
Q 004210 83 KDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQ--------- 153 (768)
Q Consensus 83 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~q--------- 153 (768)
..+. -.+..+.+.+..+.. . ...++.+++...+ +..++.+++.++.+++|++|. .+.+
T Consensus 75 -~~~~---v~~~i~~~~~~~~~~-~--~~~v~~~el~~~i----~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~ 141 (377)
T 2ych_A 75 -RKRY---VVTALSNLAVILRPI-Q--VPKMPLKEMEEAV----RWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQV 141 (377)
T ss_dssp -CCCE---EEEEECGGGCEEEEE-E--EECCCHHHHHHHH----HHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEE
T ss_pred -Ccce---EEEEecCCcEEEEEE-E--CCCCCHHHHHHHH----HHHHhhcCCCChhHceEEEEE--eCCCCCCCCccee
Confidence 0000 011122222222111 0 1347778776543 346677888899999999983 2222
Q ss_pred -----------HHHHHHHHHHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEE
Q 004210 154 -----------RRAYLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKIL 222 (768)
Q Consensus 154 -----------r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl 222 (768)
.+.+.+|++.|||++..++.||+|||++|+..... ..+..++|||+||||||+++++ .|.+ .
T Consensus 142 ~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~---~~~~~~~vvDiGggttdi~i~~--~g~~--~ 214 (377)
T 2ych_A 142 QVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAE---EPDRVFLVLDIGAESTSLVLLR--GDKP--L 214 (377)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHT---STTCEEEEEEECSSCEEEEEEE--TTEE--E
T ss_pred EEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhccc---ccCCeEEEEEECCCcEEEEEEE--CCEE--E
Confidence 38899999999999999999999999998754321 3457899999999999999987 3443 2
Q ss_pred EEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCcccEEEeccccCcceEEEecHH
Q 004210 223 SHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRRE 302 (768)
Q Consensus 223 ~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~ 302 (768)
..++..+||.+||+.|++. ++.+ +.+||++|+.++.........+..++-.+....++|+
T Consensus 215 -~~~~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~ 274 (377)
T 2ych_A 215 -AVRVLTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPG 274 (377)
T ss_dssp -EEEEESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC-------------------------
T ss_pred -EEEeeechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHH
Confidence 2346899999999999873 2332 3789999999875432111101011111234579999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--CCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCc-----------------
Q 004210 303 EFEKLSSSLLERMRIPCQKALAGS--GLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRT----------------- 363 (768)
Q Consensus 303 ~fe~~~~~~~~~i~~~i~~~l~~~--~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~----------------- 363 (768)
+|++++++.++++...|++.|+.. +.....++.|+|+||+|++|.+++.+++.||.++...
T Consensus 275 ~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~~~~~~~~ 354 (377)
T 2ych_A 275 RIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESEQ 354 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCTTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCcccCCHHH
Confidence 999999999999999999999863 5666689999999999999999999999998544222
Q ss_pred ---CChhhHHHhHHHHHhh
Q 004210 364 ---INASECVARGCALQCA 379 (768)
Q Consensus 364 ---~n~~eava~Gaa~~a~ 379 (768)
.+|..++|.|+|+++.
T Consensus 355 l~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 355 LQEIGPEFAVALGLALRGV 373 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHhhhHHHHHHHHHHHcCC
Confidence 1345667888887764
No 15
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.94 E-value=1.2e-25 Score=234.67 Aligned_cols=202 Identities=22% Similarity=0.286 Sum_probs=173.3
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCcceEeccchHHHHHHhhhcccCCCCCCCcE
Q 004210 117 QILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTY 196 (768)
Q Consensus 117 el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~ 196 (768)
+....+|++++..+....+..+..+++|+|++|...+|+++..+++.+|+++..++.||+|++++|+.. .
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~----------~ 140 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN----------D 140 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS----------S
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC----------C
Confidence 455778888888888777878889999999999999999999999999999999999999999988642 2
Q ss_pred EEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhc
Q 004210 197 VVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVL 276 (768)
Q Consensus 197 vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~L 276 (768)
.+|+|+|||||+++++. .+.+ + ......+||.+||+.+.+++. .+ ...|+++|+.+
T Consensus 141 ~~viDiGggst~~~~~~--~g~~--~-~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k~~~ 196 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIE--KGKI--T-ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIKKDF 196 (272)
T ss_dssp EEEEEECSSCEEEEEEE--TTEE--E-EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHHHSS
T ss_pred EEEEEECCCcEEEEEEE--CCEE--E-EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHHHhc
Confidence 59999999999999987 4443 2 345789999999999998773 11 26788999887
Q ss_pred cCCCcccEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhc
Q 004210 277 SANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF 356 (768)
Q Consensus 277 s~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f 356 (768)
+ ++.+|++++.++++++...+.+.++..+ +++.|+|+||++++|++++.+++.|
T Consensus 197 ~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l 250 (272)
T 3h1q_A 197 S----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL 250 (272)
T ss_dssp T----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH
T ss_pred C----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh
Confidence 5 6899999999999999999999998764 4779999999999999999999999
Q ss_pred CCCCCCcCChhhHHHhHHHHHh
Q 004210 357 NREPGRTINASECVARGCALQC 378 (768)
Q Consensus 357 g~~v~~~~n~~eava~Gaa~~a 378 (768)
+.++..+.||++++|+|||++|
T Consensus 251 ~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 251 GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SSCCBCCSSGGGHHHHHHHTTC
T ss_pred CCCccccCChHHHHHHHHHhcC
Confidence 9999899999999999999865
No 16
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.94 E-value=3.1e-26 Score=219.37 Aligned_cols=160 Identities=16% Similarity=0.321 Sum_probs=138.3
Q ss_pred cceEEeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEe
Q 004210 388 REFEVQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMI 463 (768)
Q Consensus 388 ~~~~~~d~~~~~i~i~~~~~~~~~~~~~~l~~~g~~~p~~k~~~f~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i 463 (768)
..+.+.|++|++||++|.++ .+.+|||||+++|++++.+|++..+ +.|.+|+++. .+ +.+|..||+|.|
T Consensus 18 ~~f~l~DV~P~slGie~~gg-----~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~-~~-~~dn~~LG~f~l 90 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLGG-----VFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGER-EM-AGDNKLLGQFTL 90 (182)
T ss_dssp ------CBCSSCEEEECTTS-----BEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSC-SB-GGGSEEEEEEEE
T ss_pred CCEEEEEecCCEEEEEEeCC-----EEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCc-cc-cccCceEEEEEE
Confidence 46889999999999999987 7999999999999999999998655 7888855433 33 478999999999
Q ss_pred cCCCCCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceee
Q 004210 464 GPFQTSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRL 543 (768)
Q Consensus 464 ~~~~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 543 (768)
+|+|+++.|.++|+|+|++|.||+|+|++.+ +.++++.
T Consensus 91 ~gipp~p~G~~~IeVtf~iD~nGiL~VsA~d------------------------------------------~~tg~~~ 128 (182)
T 3n8e_A 91 IGIPPAPRGVPQIEVTFDIDANGIVHVSAKD------------------------------------------KGTGREQ 128 (182)
T ss_dssp CCCCCCCTTCSCEEEEEEECTTCCEEEEEEE------------------------------------------TTTCCEE
T ss_pred cCCCCCCCCCeeEEEEEEEecCCEEEEEEEE------------------------------------------cCCCCEe
Confidence 9999999999999999999999999999873 5567778
Q ss_pred eeeeecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHH
Q 004210 544 EIPVNENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKI 598 (768)
Q Consensus 544 ~i~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l 598 (768)
.++|+.. .+||+++++++++++.+|..+|+..+++.++||+||+|||.+|++|
T Consensus 129 ~i~I~~~--~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy~~~~~l 181 (182)
T 3n8e_A 129 QIVIQSS--GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKM 181 (182)
T ss_dssp EEEESCC--CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred eEEEecC--ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8888876 5799999999999999999999999999999999999999998765
No 17
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.92 E-value=7.4e-25 Score=243.02 Aligned_cols=227 Identities=12% Similarity=0.053 Sum_probs=164.3
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHH-HHcCCcceEeccchHHHHHH-hhhcccCCCCCCCcEEEEEEeCCceEEEEEEEee
Q 004210 138 ISNCVIGVPCYLTDVQRRAYLDAA-TIAGLKPLRLMHDCTATALG-YGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYE 215 (768)
Q Consensus 138 ~~~~VitVP~~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~-y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~ 215 (768)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |.. ..++.... +.+|||+|+||||++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~--~~~~~~~~-~glVvDiG~gtt~v~~v~-- 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTS--RQVGERTL-TGTVIDSGDGVTHVIPVA-- 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGS--TTCCSCCC-CEEEEEESSSCEEEEEEE--
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcc--cccCCCCC-eEEEEEcCCCceEEEEeE--
Confidence 457999999999999999999999 89999999999999999977 421 11111223 679999999999999985
Q ss_pred CCeEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCC---------------
Q 004210 216 NGHMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANA--------------- 280 (768)
Q Consensus 216 ~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~--------------- 280 (768)
.|.. +.....+..+||++||+.|.++|..++. ...... -...++++|+.++...
T Consensus 182 ~G~~-~~~~~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~ 250 (418)
T 1k8k_A 182 EGYV-IGSCIKHIPIAGRDITYFIQQLLRDREV---GIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGS 250 (418)
T ss_dssp TTEE-CGGGCEEESCSHHHHHHHHHHHHHTTCC---CCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGG
T ss_pred CCEE-cccceEEEeCcHHHHHHHHHHHHHhcCC---CCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhccccc
Confidence 4432 3222246789999999999999975431 111111 1256788888876421
Q ss_pred --cccEEEeccccCcceEEEecHHHH---HHHHHHH------HHHHHHHHHHHHHhcC--CCCCCcCEEEEecCCCChHH
Q 004210 281 --EAPLNIECLMNEKDVKGFIRREEF---EKLSSSL------LERMRIPCQKALAGSG--LNVEKIHSVELVGSGSRIPA 347 (768)
Q Consensus 281 --~~~i~i~~l~~~~d~~~~itr~~f---e~~~~~~------~~~i~~~i~~~l~~~~--~~~~~i~~V~LvGG~srip~ 347 (768)
...+.++....+.+..+.+++++| |.+++|. +..+...|.++|..+. +....++.|+|+||+|++|.
T Consensus 251 ~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg 330 (418)
T 1k8k_A 251 KWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRD 330 (418)
T ss_dssp GTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTT
T ss_pred ccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCcccccc
Confidence 023455544445566889999999 4444443 2468888899998764 34445788999999999999
Q ss_pred HHHHHHhhcCC------------------------CCCCcCChhhHHHhHHHHHhhH
Q 004210 348 ISRMLNSLFNR------------------------EPGRTINASECVARGCALQCAM 380 (768)
Q Consensus 348 v~~~l~~~fg~------------------------~v~~~~n~~eava~Gaa~~a~~ 380 (768)
+++.|++.++. ++..+.++..++.+||+++|..
T Consensus 331 ~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 331 FGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 99998876531 1223457789999999999863
No 18
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.91 E-value=2.8e-24 Score=236.21 Aligned_cols=199 Identities=16% Similarity=0.101 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCc
Q 004210 152 VQRRAYLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLG 231 (768)
Q Consensus 152 ~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lG 231 (768)
..-+.+.+|++.|||++..++.||+|||++|.... .....+++||+||||||+++++ +|.+.. .++.++|
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~-----~~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~G 237 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP-----EKDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVG 237 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH-----HHHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCC
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc-----cccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccH
Confidence 34578899999999999999999999999886432 2346799999999999999987 555432 3367999
Q ss_pred hhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCC-----CcccEEEeccccCcceEEEecHHHHHH
Q 004210 232 GRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSAN-----AEAPLNIECLMNEKDVKGFIRREEFEK 306 (768)
Q Consensus 232 G~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~-----~~~~i~i~~l~~~~d~~~~itr~~fe~ 306 (768)
|++||+.|+..+. + ...+||++|+.++.. .+..+.++.+. ......++|++|.+
T Consensus 238 G~~it~dIa~~l~--------~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~l~~ 296 (419)
T 4a2a_A 238 MKHVIKDVSAVLD--------T-----------SFEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKKLSV 296 (419)
T ss_dssp HHHHHHHHHHHHT--------C-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHC--------C-----------CHHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEEcHHHHHH
Confidence 9999999987652 1 137899999998642 34456777653 24667999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC------CCCCcCEEEEecCCCChHHHHHHHHhhcCCCCC--C---------------c
Q 004210 307 LSSSLLERMRIPCQKALAGSGL------NVEKIHSVELVGSGSRIPAISRMLNSLFNREPG--R---------------T 363 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~------~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~--~---------------~ 363 (768)
+++|.++++...+++.|+.++. ....++.|+|+||+|++|.+++.+++.||.++. . .
T Consensus 297 ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~~~ 376 (419)
T 4a2a_A 297 IIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADEVA 376 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCccccc
Confidence 9999999999999999999987 345689999999999999999999999986542 2 1
Q ss_pred CChhhHHHhHHHHHhhHh
Q 004210 364 INASECVARGCALQCAML 381 (768)
Q Consensus 364 ~n~~eava~Gaa~~a~~l 381 (768)
.+|..+++.|.+++++..
T Consensus 377 ~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 377 NDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp TCGGGHHHHHTTCC----
T ss_pred CCchHHHHHHHHHHHhhc
Confidence 389999999999887643
No 19
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.91 E-value=7.7e-25 Score=239.00 Aligned_cols=305 Identities=11% Similarity=0.115 Sum_probs=192.7
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceE-EEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChH
Q 004210 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPT-VVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDD 80 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~~~~i~~n~~~~r~~Ps-~v~~~~~~~~~G~~A~~~~~~~p~~~~~~~k~llg~~~~~~~ 80 (768)
..|+||+||+++++++...+.|.-++.+-.|..+.++ .+.+.....++|++|.... .. ..
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~------------- 66 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LT------------- 66 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----TS--EE-------------
T ss_pred ceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcC----cc--cc-------------
Confidence 5799999999999999876664444433222222221 1122223457888885330 00 00
Q ss_pred HHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCC--CCeEEEEeCCCCCHHHHHHHH
Q 004210 81 VQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIP--ISNCVIGVPCYLTDVQRRAYL 158 (768)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~~--~~~~VitVP~~~~~~qr~~l~ 158 (768)
-..|. .+|.+ ..+. ....+++++.. +.++.. ...++||+|++++..+|+++.
T Consensus 67 -----~~~Pi-----~~G~i----------~d~d---~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~ 120 (375)
T 2fxu_A 67 -----LKYPI-----EHGII----------TNWD---DMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMT 120 (375)
T ss_dssp -----EECSE-----ETTEE----------CCHH---HHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHH
T ss_pred -----eeccc-----cCCcc----------cCHH---HHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHHH
Confidence 01121 13321 1122 23334444432 223322 346999999999999999888
Q ss_pred HHH-HHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHH
Q 004210 159 DAA-TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDE 237 (768)
Q Consensus 159 ~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~ 237 (768)
+++ +.+|++.+.+++||+|||++|+. ...+|||+|+|||+++.+. +|.. +........+||++||+
T Consensus 121 e~~fe~~g~~~~~~~~e~~aaa~a~g~----------~~~lVvDiG~gtt~v~~v~--~G~~-~~~~~~~~~~GG~~lt~ 187 (375)
T 2fxu_A 121 QIMFETFNVPAMYVAIQAVLSLYASGR----------TTGIVLDSGDGVTHNVPIY--EGYA-LPHAIMRLDLAGRDLTD 187 (375)
T ss_dssp HHHHHTTCCSEEEEEEHHHHHHHHTTC----------SSEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHH
T ss_pred HHHHHhcCcceEEEccchheeeeecCC----------CeEEEEEcCCCceEEeEeE--CCEE-eccceEEeccCHHHHHH
Confidence 765 88899999999999999999874 3589999999999987764 4532 32223457899999999
Q ss_pred HHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCC----------------CcccEEEeccccCcceEEEecH
Q 004210 238 VLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSAN----------------AEAPLNIECLMNEKDVKGFIRR 301 (768)
Q Consensus 238 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~----------------~~~~i~i~~l~~~~d~~~~itr 301 (768)
.|.+++..+. +...... =...++++|+.++.- ....+.++ ++ ..+.|++
T Consensus 188 ~l~~~l~~~~---~~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg--~~i~i~~ 252 (375)
T 2fxu_A 188 YLMKILTERG---YSFVTTA-------EREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DG--QVITIGN 252 (375)
T ss_dssp HHHHHHHHHT---CCCCSHH-------HHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TS--CEEEEST
T ss_pred HHHHHHHhcC---CCCCcHH-------HHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CC--CEEEECh
Confidence 9999998651 2211000 114456666655321 11222222 22 2467888
Q ss_pred HHHH---HHHHHH-----HHHHHHHHHHHHHhcC--CCCCCcCEEEEecCCCChHHHHHHHHhhcC--------CCCCCc
Q 004210 302 EEFE---KLSSSL-----LERMRIPCQKALAGSG--LNVEKIHSVELVGSGSRIPAISRMLNSLFN--------REPGRT 363 (768)
Q Consensus 302 ~~fe---~~~~~~-----~~~i~~~i~~~l~~~~--~~~~~i~~V~LvGG~srip~v~~~l~~~fg--------~~v~~~ 363 (768)
+.|. .+++|. ...+...|.++|..+. +....++.|+|+||+|++|.++++|++.++ .++...
T Consensus 253 erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~ 332 (375)
T 2fxu_A 253 ERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332 (375)
T ss_dssp HHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECC
T ss_pred hheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcC
Confidence 8873 333332 2457788888888653 223345789999999999999999998875 234456
Q ss_pred CChhhHHHhHHHHHhh
Q 004210 364 INASECVARGCALQCA 379 (768)
Q Consensus 364 ~n~~eava~Gaa~~a~ 379 (768)
.+|..++++||+++|.
T Consensus 333 ~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 333 PERKYSVWIGGSILAS 348 (375)
T ss_dssp TTTTSHHHHHHHHHHH
T ss_pred CCCCccEEcchHHhhC
Confidence 7999999999999997
No 20
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.89 E-value=8.5e-23 Score=190.64 Aligned_cols=147 Identities=16% Similarity=0.328 Sum_probs=130.6
Q ss_pred EeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCC
Q 004210 392 VQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQ 467 (768)
Q Consensus 392 ~~d~~~~~i~i~~~~~~~~~~~~~~l~~~g~~~p~~k~~~f~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~ 467 (768)
+.|++|++||++|.++ .+.+||+||+++|++++.+|++..+ +.|.+|+++. .+ +.+|..||+|.|.|++
T Consensus 2 ~~Dv~p~slGi~~~gg-----~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~-~~-~~dn~~LG~f~l~gip 74 (152)
T 3h0x_A 2 NADVNALTLGIETTGG-----VMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGER-AM-SKDNNLLGKFELTGIP 74 (152)
T ss_dssp -CCBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSC-SB-GGGSEEEEEEEECCCC
T ss_pred ccceeccEEEEEEcCC-----EEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCc-cc-cccCcEEEEEEEeCCC
Confidence 5799999999999987 8999999999999999999998654 6788855443 33 4889999999999999
Q ss_pred CCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeee
Q 004210 468 TSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPV 547 (768)
Q Consensus 468 ~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i 547 (768)
+++.|.++|+|+|++|.||+|+|++.+ +.++++..++|
T Consensus 75 p~p~G~~~I~Vtf~iD~nGiL~V~a~d------------------------------------------~~tg~~~~i~I 112 (152)
T 3h0x_A 75 PAPRGVPQIEVTFALDANGILKVSATD------------------------------------------KGTGKSESITI 112 (152)
T ss_dssp CCCTTCSCEEEEEEECTTSEEEEEEEE------------------------------------------TTTCCEEEEEE
T ss_pred CCCCCCceEEEEEEEcCCCEEEEEEEE------------------------------------------cCCCcEeEEEE
Confidence 999999999999999999999999974 56777888999
Q ss_pred ecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHH
Q 004210 548 NENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALE 588 (768)
Q Consensus 548 ~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LE 588 (768)
+... ++||.++++++++++.+|..+|+..+++.++||+||
T Consensus 113 ~~~~-~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 113 TNDK-GRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp ECCT-TCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred ecCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 8765 579999999999999999999999999999999987
No 21
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.89 E-value=1.1e-22 Score=189.57 Aligned_cols=147 Identities=16% Similarity=0.319 Sum_probs=126.6
Q ss_pred EeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCC
Q 004210 392 VQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQ 467 (768)
Q Consensus 392 ~~d~~~~~i~i~~~~~~~~~~~~~~l~~~g~~~p~~k~~~f~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~ 467 (768)
+.|++|++||++|.++ .+.+||+||+++|++++.+|++..| +.|.+|+++. . .+.+|..||+|.|.|++
T Consensus 2 ~~Dv~p~slGie~~gg-----~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~-~-~~~dn~~LG~f~l~gip 74 (152)
T 3dob_A 2 NADVAPLSLGIETAGG-----VMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGER-A-MTRDNHRLGTFELSGIP 74 (152)
T ss_dssp --CBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSC-S-BGGGSEEEEEEEEECCC
T ss_pred ceeeecceEEEEEcCC-----EEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCc-c-ccccCceeEEEEEeCCC
Confidence 5799999999999987 8999999999999999999998655 5677755433 2 35899999999999999
Q ss_pred CCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeee
Q 004210 468 TSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPV 547 (768)
Q Consensus 468 ~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i 547 (768)
+++.|.++|+|+|++|.||+|+|++.+ +.++++..++|
T Consensus 75 p~p~G~~~IeVtf~iD~nGiL~Vsa~d------------------------------------------~~tg~~~~i~I 112 (152)
T 3dob_A 75 PAPRGVPQIEVTFNIDANGILNVSAED------------------------------------------KSTGKSNRITI 112 (152)
T ss_dssp CCCTTCCCEEEEEEECTTCCEEEEEEE------------------------------------------TTTCCEEEEEE
T ss_pred CCCCCCceEEEEEEeCCCCeEEEEEEE------------------------------------------cCCCCEEEEEE
Confidence 999999999999999999999999973 56777888999
Q ss_pred ecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHH
Q 004210 548 NENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALE 588 (768)
Q Consensus 548 ~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LE 588 (768)
+... ++||.+++++++++.+++..+|+..+++.++||+||
T Consensus 113 ~~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 113 QNEK-GRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CCC-----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred EcCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 8765 569999999999999999999999999999999986
No 22
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.88 E-value=1.4e-22 Score=188.56 Aligned_cols=146 Identities=18% Similarity=0.339 Sum_probs=128.7
Q ss_pred EeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCC
Q 004210 392 VQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQ 467 (768)
Q Consensus 392 ~~d~~~~~i~i~~~~~~~~~~~~~~l~~~g~~~p~~k~~~f~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~ 467 (768)
+.|++|++||++|.++ .+.+||+||+++|++++.+|++..| +.|.+|+++ ..+ +.+|..||+|.|.|++
T Consensus 2 ~~DV~p~slGie~~gg-----~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe-~~~-~~dn~~LG~f~l~gip 74 (151)
T 3dqg_A 2 NADVTPLSLGIETLGG-----IMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGE-REM-ATSNKLLGQFSLVGIP 74 (151)
T ss_dssp --CBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESS-CSB-GGGSEEEEEEEEECCC
T ss_pred cceeeeeEEEEEEcCC-----EEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcC-Ccc-cccCcEEEEEEEeCCC
Confidence 5799999999999987 8999999999999999999998654 777775543 333 4899999999999999
Q ss_pred CCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeee
Q 004210 468 TSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPV 547 (768)
Q Consensus 468 ~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i 547 (768)
+++.|.++|+|+|++|.||+|+|++.+ +.++++..++|
T Consensus 75 p~p~G~~~IeVtf~iD~nGiL~Vsa~d------------------------------------------~~tg~~~~i~I 112 (151)
T 3dqg_A 75 PAPRGVPQVEVTFDIDANGIVNVSARD------------------------------------------RGTGKEQQIVI 112 (151)
T ss_dssp CCCTTCSCEEEEEEECTTSEEEEEEEE------------------------------------------TTTCCEEEEEE
T ss_pred CCCCCCcEEEEEEEeccCcEEEEEEEE------------------------------------------ccCCCEeEEEE
Confidence 999999999999999999999999973 55677888898
Q ss_pred ecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHH
Q 004210 548 NENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALE 588 (768)
Q Consensus 548 ~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LE 588 (768)
+.. .+||.+++++++++++++..+|+..+++.++||+||
T Consensus 113 ~~~--~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 113 QSS--GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp ECS--SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred ecC--CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 876 479999999999999999999999999999999986
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.88 E-value=7.5e-23 Score=218.35 Aligned_cols=226 Identities=12% Similarity=0.060 Sum_probs=150.5
Q ss_pred EecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCcceEeccc
Q 004210 112 KFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCY-LTDV--QR--RAYLDA------------ATIAGLKPLRLMHD 174 (768)
Q Consensus 112 ~~~~~el~a~~L~~l~~~a~~~~~~~~~~~VitVP~~-~~~~--qr--~~l~~A------------a~~AGl~~~~li~E 174 (768)
.+++..+++.+ ..|+. +. ..+.+ ..+|+++|.. |... || .++.+- ++.+++..+.++.|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~-~~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SG-LPVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HS-CCSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cC-CCCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 46777776654 44443 21 11222 4699999987 6531 21 222221 23445677899999
Q ss_pred hHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccC
Q 004210 175 CTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDID 254 (768)
Q Consensus 175 p~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~ 254 (768)
|.||+++|.... ..+..++|+|+||||||+++++ ++.+.+.++.++.++||.+||+.|++++.++ +.+
T Consensus 149 ~~aa~~~~~~~~-----~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~ 216 (320)
T 2zgy_A 149 SIPAGYEVLQEL-----DELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTK 216 (320)
T ss_dssp SHHHHHHHHHHS-----CTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBG
T ss_pred cHHHHHhhhccc-----cCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCC
Confidence 999999887322 3467899999999999999997 4555566666788999999999999888631 333
Q ss_pred ccCChHHHHHHHHHHHHH-hhhccCCCcccEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 004210 255 VYTNVKASIRLRASCEKL-KKVLSANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQKALAGSGLNVEKI 333 (768)
Q Consensus 255 ~~~~~~~~~rL~~~ae~~-K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i 333 (768)
+.. ..|+++ |..- .... .....+ . .-.++++.+++.+.++++...|.+.+++. .++
T Consensus 217 i~~---------~~ae~~lk~~~---~~~~--~~~~i~---~--~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~ 273 (320)
T 2zgy_A 217 GSS---------YLADDIIIHRK---DNNY--LKQRIN---D--ENKISIVTEAMNEALRKLEQRVLNTLNEF----SGY 273 (320)
T ss_dssp GGH---------HHHHHHHHTTT---CHHH--HHHHSS---S--SCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCC
T ss_pred CCH---------HHHHHHHHHhh---hhhc--ccceec---C--chhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCC
Confidence 321 344544 3320 0000 000000 0 11345666667777777776666666652 478
Q ss_pred CEEEEecCCCChHHHHHHHHhhcCC---CCCCcCChhhHHHhHHHHHh
Q 004210 334 HSVELVGSGSRIPAISRMLNSLFNR---EPGRTINASECVARGCALQC 378 (768)
Q Consensus 334 ~~V~LvGG~srip~v~~~l~~~fg~---~v~~~~n~~eava~Gaa~~a 378 (768)
+.|+|+||+|++ +++.|++.|+. ++....||++|+|+||+++|
T Consensus 274 ~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 274 THVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 999999999998 99999999986 57788999999999999875
No 24
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.86 E-value=2e-21 Score=182.70 Aligned_cols=147 Identities=11% Similarity=0.285 Sum_probs=128.9
Q ss_pred EeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCC
Q 004210 392 VQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQ 467 (768)
Q Consensus 392 ~~d~~~~~i~i~~~~~~~~~~~~~~l~~~g~~~p~~k~~~f~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~ 467 (768)
+.|++|++||+++.++ .+.+||++|+++|++++.+|++..+ +.|.++|++.. .+.+|..||+|.|.+++
T Consensus 2 v~Dv~p~slGi~~~~g-----~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~--~~~~n~~lg~~~l~gip 74 (152)
T 2op6_A 2 NADVNPLTLGIETVGG-----VMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERP--MVMDNHKLGNFDVTGIP 74 (152)
T ss_dssp -CCBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCS--BGGGSEEEEEEEECCCC
T ss_pred ceEeecccEEEEEeCC-----EEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCc--cCccCCEeEEEEEECCC
Confidence 5799999999999887 8999999999999999999998655 88888877532 34689999999999999
Q ss_pred CCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeee
Q 004210 468 TSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPV 547 (768)
Q Consensus 468 ~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i 547 (768)
+++.|.++|+|+|++|.||+|+|++.+ +.++++..++|
T Consensus 75 p~p~G~~~I~V~f~id~nGiL~V~a~d------------------------------------------~~tg~~~~i~i 112 (152)
T 2op6_A 75 PAPRGVPQIEVTFEIDVNGILHVSAED------------------------------------------KGTGNKNKLTI 112 (152)
T ss_dssp CCCTTCSCEEEEEEECTTSCEEEEEEE------------------------------------------TTTCCEEEEEE
T ss_pred CCCCCCceEEEEEEECCCcEEEEEEEE------------------------------------------ecCCcEEEEEe
Confidence 999999999999999999999999863 34455667888
Q ss_pred ecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHH
Q 004210 548 NENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALE 588 (768)
Q Consensus 548 ~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LE 588 (768)
.... ++||.++++++++++.+|..+|+..+++.++||+||
T Consensus 113 ~~~~-~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 113 TNDH-NRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CSSS-SCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eccc-cCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 7664 579999999999999999999999999999999986
No 25
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.80 E-value=4.2e-18 Score=177.67 Aligned_cols=184 Identities=16% Similarity=0.137 Sum_probs=127.0
Q ss_pred HcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHH
Q 004210 163 IAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSY 242 (768)
Q Consensus 163 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~ 242 (768)
.++..++..|+|++|+++++.+.. +....|+|+|||+++++++. .++.+.+...++++..||.+|+..++++
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~-------~~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~ 139 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFII-------PETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKI 139 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHS-------TTCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHH
T ss_pred HHhhCCCcccchHHHHHHHHHHhC-------CCCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHH
Confidence 367778899999999998876643 23457899999999999884 5678888888999999999999999988
Q ss_pred HHHHHhhhcccCccCChHHHHHHHHHHHHHhh--hccCCCcccEE---EeccccCcceEEEecHHHHHHHHHHHHHHHHH
Q 004210 243 FAAQFKQQYDIDVYTNVKASIRLRASCEKLKK--VLSANAEAPLN---IECLMNEKDVKGFIRREEFEKLSSSLLERMRI 317 (768)
Q Consensus 243 l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~--~Ls~~~~~~i~---i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~ 317 (768)
+.-.+.....+ +..++. .++........ +..+..+ ...++++..+.+.+..
T Consensus 140 l~~~~~~~~~~---------------~~~a~~~~~i~~~~~~f~~s~~~~~~~~~---------~~~~di~a~~~~~v~~ 195 (276)
T 4ehu_A 140 IEVDVSELGSI---------------SMNSQNEVSISSTCTVFAESEVISHLSEN---------AKIEDIVAGIHTSVAK 195 (276)
T ss_dssp HTCCGGGHHHH---------------HTTCSSCCCCCCCSHHHHHHHHHHHHHTT---------CCHHHHHHHHHHHHHH
T ss_pred hccChhhhHHH---------------HhcCCCCCCcCCccchhhhhHHHHhhhcc---------ccHHHHHHHHHHHHHH
Confidence 85443321110 001110 01110000000 0000011 1124566666666666
Q ss_pred HHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhhHhc
Q 004210 318 PCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLS 382 (768)
Q Consensus 318 ~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~~ls 382 (768)
.+.....+. ..++.|+|+||.+++|.|++.+++.||.++..+.||++++|+|||++|....
T Consensus 196 ~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 196 RVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 555544443 2567899999999999999999999999999999999999999999997543
No 26
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.76 E-value=5.8e-20 Score=201.38 Aligned_cols=215 Identities=14% Similarity=0.138 Sum_probs=90.1
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCC
Q 004210 139 SNCVIGVPCYLTDVQRRAYLDAA-TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENG 217 (768)
Q Consensus 139 ~~~VitVP~~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~ 217 (768)
..++||+|++++..+|+++.+++ +.+|++.+.++++|+||+++++. ...+|+|+|+|+|+++.+. +|
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~----------~~~lVVDiG~g~T~v~pv~--~G 172 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL----------LTGVVVDSGDGVTHICPVY--EG 172 (394)
T ss_dssp -----------------------------------------------------------CCEEEECSSCEEEECEE--TT
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC----------ceEEEEEcCCCceEeeeeE--CC
Confidence 45999999999999999888865 88899999999999999988864 3569999999999998774 34
Q ss_pred eEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCc--------------cc
Q 004210 218 HMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAE--------------AP 283 (768)
Q Consensus 218 ~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~--------------~~ 283 (768)
.+ +........+||+++|+.|.+++..+ .+....... ...++.+|+.++.-.. ..
T Consensus 173 ~~-~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 173 FS-LPHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp EE-CSTTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred EE-cccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 33 21112245899999999999999754 122211111 1456677776643210 00
Q ss_pred EEEeccccCcceEEEecHHHHH---HHHHHH-----HHHHHHHHHHHHHhcCCC--CCCcCEEEEecCCCChHHHHHHHH
Q 004210 284 LNIECLMNEKDVKGFIRREEFE---KLSSSL-----LERMRIPCQKALAGSGLN--VEKIHSVELVGSGSRIPAISRMLN 353 (768)
Q Consensus 284 i~i~~l~~~~d~~~~itr~~fe---~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~V~LvGG~srip~v~~~l~ 353 (768)
... .+.++ ..++|+++.|. -+++|- ...+...|.++|..+... ..-++.|+|+||+|++|++.++|+
T Consensus 242 ~~~-~lpdg--~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~ 318 (394)
T 1k8k_B 242 ESY-TLPDG--RIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLE 318 (394)
T ss_dssp EEE-ECTTS--CEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHH
T ss_pred eEE-ECCCC--CEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHH
Confidence 111 12222 24677887773 222221 234677788888876432 223478999999999999999988
Q ss_pred hhcCC-----------------CC--CCcCChhhHHHhHHHHHhh
Q 004210 354 SLFNR-----------------EP--GRTINASECVARGCALQCA 379 (768)
Q Consensus 354 ~~fg~-----------------~v--~~~~n~~eava~Gaa~~a~ 379 (768)
+.++. ++ ..+.++..++.+|++++|.
T Consensus 319 ~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 319 RELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 77742 22 2255778999999999886
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.70 E-value=5.6e-17 Score=174.24 Aligned_cols=208 Identities=15% Similarity=0.164 Sum_probs=141.5
Q ss_pred CeEEEEeCCCCCHHHH-HHHHHHHHHcCC------------cceEeccchHHHHHHhhhcccCCCCC---CCcEEEEEEe
Q 004210 139 SNCVIGVPCYLTDVQR-RAYLDAATIAGL------------KPLRLMHDCTATALGYGIYKTDFSNV---GPTYVVFVDI 202 (768)
Q Consensus 139 ~~~VitVP~~~~~~qr-~~l~~Aa~~AGl------------~~~~li~Ep~Aaal~y~~~~~~~~~~---~~~~vlv~D~ 202 (768)
..+++.+|..+...+| +++++++..++- ..+.++.||.||+++|+.... +.. .+..++|+|+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~--~~~~~~~~~~~~vvDi 191 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENG--KVFKAFTEGKYSVLDF 191 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETT--EECHHHHTCEEEEEEE
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccC--ccccccccCcEEEEEe
Confidence 3789999999988887 589998875543 467899999999999876431 101 3678999999
Q ss_pred CCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCcc
Q 004210 203 GHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEA 282 (768)
Q Consensus 203 GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~ 282 (768)
||||||++++. ++.+ +....+...+||..+++.+.+++.+++. +..+. . ...++.+.
T Consensus 192 GggTtd~~v~~--~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~-------- 248 (355)
T 3js6_A 192 GSGTTIIDTYQ--NMKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE-------- 248 (355)
T ss_dssp CSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC--------
T ss_pred CCCcEEEEEEc--CCEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc--------
Confidence 99999999983 4433 2112234679999999999999876532 22221 1 11111111
Q ss_pred cEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHH--HHHHHHhhcCCCC
Q 004210 283 PLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPA--ISRMLNSLFNREP 360 (768)
Q Consensus 283 ~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~--v~~~l~~~fg~~v 360 (768)
+.... .+..-...+ .+.+++.+++++++|...|++.+.+ ++.++.|+|+||++.++. +++.|++.|+..
T Consensus 249 -~~~~~--~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~- 319 (355)
T 3js6_A 249 -YKQCK--LNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA- 319 (355)
T ss_dssp ----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-
T ss_pred -ccccc--ccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC-
Confidence 00000 000001112 3456778888888888888888764 356899999999999998 999999998642
Q ss_pred CCcCChhhHHHhHHHHHhhHhcC
Q 004210 361 GRTINASECVARGCALQCAMLSP 383 (768)
Q Consensus 361 ~~~~n~~eava~Gaa~~a~~ls~ 383 (768)
.||..|+|+|+..++..+..
T Consensus 320 ---~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 ---DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp ---SSGGGHHHHHHHHHHHHHHH
T ss_pred ---CCcHHHHHHHHHHHHHHHHh
Confidence 89999999999999887653
No 28
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.60 E-value=3.3e-15 Score=136.30 Aligned_cols=101 Identities=15% Similarity=0.329 Sum_probs=84.0
Q ss_pred ccceEEeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEE
Q 004210 387 VREFEVQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFM 462 (768)
Q Consensus 387 ~~~~~~~d~~~~~i~i~~~~~~~~~~~~~~l~~~g~~~p~~k~~~f~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~ 462 (768)
++++.+.|++|++||+++.++ .+.+||+||+++|++++.+|++..+ +.|.++|++.. .+.+|..||+|.
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g-----~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~--~~~~n~~Lg~f~ 86 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGG-----VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERK--RAADNKSLGQFN 86 (135)
T ss_dssp -------CCCSSCCCEEETTT-----EECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSS--SCSSSEEEEEEE
T ss_pred eCcEEEEEeecCcEEEEEECC-----EEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCc--ccccCcEEEEEE
Confidence 568899999999999999887 8999999999999999999987543 88898877533 347899999999
Q ss_pred ecCCCCCCCCcceEEEEEEEcCCccEEEEeee
Q 004210 463 IGPFQTSHAETARVKVRVHLDLDGVVRVQSAS 494 (768)
Q Consensus 463 i~~~~~~~~~~~~i~v~~~~d~~Gil~v~~~~ 494 (768)
+.++++++.|.++|+|+|++|.||+|+|++.+
T Consensus 87 l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d 118 (135)
T 1q5l_A 87 LDGINPAPRGMPQIEVTFDIDADGILHVSAKD 118 (135)
T ss_dssp CCCCCSCCSSSCCEEEEEEECTTSEEEEEEEE
T ss_pred EeCCCCCCCceeEEEEEEEECCCCEEEEEEEE
Confidence 99999999999999999999999999999863
No 29
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.59 E-value=4.3e-16 Score=166.02 Aligned_cols=204 Identities=12% Similarity=0.119 Sum_probs=143.2
Q ss_pred CeEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEe
Q 004210 139 SNCVIGVPCYLTD--VQRRAYLDAATIA--------G------LKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDI 202 (768)
Q Consensus 139 ~~~VitVP~~~~~--~qr~~l~~Aa~~A--------G------l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~ 202 (768)
..+++++|..+.. .+|+.+++....- | +..+.++.|+.+|.+.+. . ..+...++|+|+
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~---~~~~~~v~vvDi 179 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---E---NFKNKNVAVIDF 179 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---C---CCTTCEEEEEEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---h---hhccCCEEEEEe
Confidence 4789999987764 3677787766521 1 124677888888876542 1 135688999999
Q ss_pred CCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCcc
Q 004210 203 GHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEA 282 (768)
Q Consensus 203 GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~ 282 (768)
||||||++++. ++.+ +....+...+||.++++.|++++.. .+|+..+.. ..++++|+. ...
T Consensus 180 GggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~---------~~~e~i~~~----g~~ 240 (329)
T 4apw_A 180 GGLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN---------EQAESALNN----GYM 240 (329)
T ss_dssp CSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS---------BTTTTCSSS----CSS
T ss_pred CCCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH---------HHHHHHHhc----CCc
Confidence 99999999998 4444 3222335679999999999987754 045554443 334444442 111
Q ss_pred cEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCC
Q 004210 283 PLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGR 362 (768)
Q Consensus 283 ~i~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~ 362 (768)
. .+.++ ..+..+.+++.++++++.|...+++. +.+++.++.|+|+||++.+ +.+.|++.|+.++..
T Consensus 241 ~-------~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v 306 (329)
T 4apw_A 241 K-------KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSII 306 (329)
T ss_dssp C-------EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEEC
T ss_pred c-------cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEe
Confidence 0 01111 13557788888888888888887776 2455568999999999998 569999999977888
Q ss_pred cCChhhHHHhHHHHHhhHh
Q 004210 363 TINASECVARGCALQCAML 381 (768)
Q Consensus 363 ~~n~~eava~Gaa~~a~~l 381 (768)
..||..|+|+|+..++...
T Consensus 307 ~~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 307 TNNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp CSSGGGHHHHHHHHHHHHH
T ss_pred cCCChhhHHHHHHHHHhhh
Confidence 8999999999999887643
No 30
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.37 E-value=7.5e-12 Score=138.70 Aligned_cols=178 Identities=13% Similarity=0.124 Sum_probs=116.4
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCC----ceeecHHHHhhhhhCCcchHhHHHHhcCCCCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEK----QRFLGSAGAASAMMNPKSTISQVKRLLGRKFR 77 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~~~~i~~n~~~~r~~Ps~v~~~~~----~~~~G~~A~~~~~~~p~~~~~~~k~llg~~~~ 77 (768)
..|+||+||.++++++...+.|.-+ +||+|+.... ..+||+++.... + +
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~v---------~PSvVg~~~~~~~~~~~vG~e~~~~~---r-----------~---- 76 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQSI---------LPSVYGKYTADEGNKKIFSEQSIGIP---R-----------K---- 76 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSEE---------EESEEEEESSCSSCCEECCTTGGGSC---C-----------T----
T ss_pred CeEEEECCCcEEEEEECCCCCeeee---------cCceeEEeccCCCccEEEecHHHhcC---c-----------C----
Confidence 4689999999999999766653333 4999988542 357787532110 0 0
Q ss_pred ChHHHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccC--CCC-eEEEEeCCCCCHHHH
Q 004210 78 EDDVQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKI--PIS-NCVIGVPCYLTDVQR 154 (768)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~el~a~~L~~l~~~a~~~~~~--~~~-~~VitVP~~~~~~qr 154 (768)
. ..-..|+ .+|.+ ..+ +....+++|+... .++. .-. .++||.|+......|
T Consensus 77 ~-----l~l~~Pi-----~~GvI----------~dw---d~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~R 130 (498)
T 3qb0_A 77 D-----YELKPII-----ENGLV----------IDW---DTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENR 130 (498)
T ss_dssp T-----EEEEESE-----ETTEE----------SCH---HHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHH
T ss_pred c-----eEEeccC-----cCCEE----------ccH---HHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHH
Confidence 0 0001111 13321 122 3334455554432 2221 223 699999999999999
Q ss_pred HHHHHHH-HHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchh
Q 004210 155 RAYLDAA-TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGR 233 (768)
Q Consensus 155 ~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~ 233 (768)
+.+.+.+ +.+|++.+.++.+|.||++++|. .+-||+|+|+|+|+++.+. .|.. +........+||+
T Consensus 131 e~~~eilFE~f~vpav~l~~~~vlalya~G~----------~tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~ 197 (498)
T 3qb0_A 131 KKSLEVLLEGMQFEACYLAPTSTCVSFAAGR----------PNCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGK 197 (498)
T ss_dssp HHHHHHHHTTSCCSEEEEEEHHHHHHHHHTC----------SSEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHH
T ss_pred HHHHHHHHhhcCCCeEeecchHHHHHHHcCC----------CeEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHH
Confidence 9998865 88999999999999999987764 1249999999999999985 3322 1111113479999
Q ss_pred hHHHHHHHHHHH
Q 004210 234 DFDEVLSSYFAA 245 (768)
Q Consensus 234 ~~d~~l~~~l~~ 245 (768)
++|..|.++|..
T Consensus 198 ~lt~~L~~lL~~ 209 (498)
T 3qb0_A 198 FINHLIKKALEP 209 (498)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHHHHh
Confidence 999999998864
No 31
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.34 E-value=4.6e-13 Score=147.05 Aligned_cols=223 Identities=13% Similarity=0.047 Sum_probs=140.9
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCC
Q 004210 139 SNCVIGVPCYLTDVQRRAYLDAA-TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENG 217 (768)
Q Consensus 139 ~~~VitVP~~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~ 217 (768)
..+++|.|+..+...|+.+.+.+ +.+|++.+.++.+|.+|+++.+.... ......+-||+|+|+|+|+++.+. .|
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~--~~~~~~tglVVDiG~g~T~v~PV~--~G 199 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSK--VTDRSLTGTVVDSGDGVTHIIPVA--EG 199 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTT--TCSCCCCEEEEEESSSCEEEEEEE--TT
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCccc--ccCCCceEEEEECCCCceEEEEEE--CC
Confidence 47999999999999999998888 78999999999999999988774321 001135689999999999999984 33
Q ss_pred eEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhccCCCcc---c--------EEE
Q 004210 218 HMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEA---P--------LNI 286 (768)
Q Consensus 218 ~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~---~--------i~i 286 (768)
.. +........+||+++|..|.+++..+... ... ...++.+|+.++.-... . ..+
T Consensus 200 ~~-l~~~~~rl~~gG~~lt~~L~~lL~~~~~~----~~~---------~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~ 265 (427)
T 3dwl_A 200 YV-IGSSIKTMPLAGRDVTYFVQSLLRDRNEP----DSS---------LKTAERIKEECCYVCPDIVKEFSRFDREPDRY 265 (427)
T ss_dssp EE-CGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----
T ss_pred EE-ehhhheeccccHHHHHHHHHHHHHHcCCC----chh---------HHHHHHHHHhcCcccCCHHHHHHHhhcCcccc
Confidence 22 11111124799999999999888654321 111 15566777766432100 0 001
Q ss_pred ec--c--ccCcceEEEecHHHH---HHHHHHH------HHHHHHHHHHHHHhcCCC--CCCcCEEEEecCCCChHHHHHH
Q 004210 287 EC--L--MNEKDVKGFIRREEF---EKLSSSL------LERMRIPCQKALAGSGLN--VEKIHSVELVGSGSRIPAISRM 351 (768)
Q Consensus 287 ~~--l--~~~~d~~~~itr~~f---e~~~~~~------~~~i~~~i~~~l~~~~~~--~~~i~~V~LvGG~srip~v~~~ 351 (768)
.. + .++....+.|..+.| |-+++|- ...|.+.|.++|.++... ..-...|+|+||+|.+|++.++
T Consensus 266 ~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~R 345 (427)
T 3dwl_A 266 LKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNR 345 (427)
T ss_dssp CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHH
T ss_pred ceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHH
Confidence 10 1 123334566777776 2333331 234677777777765321 1112569999999999999988
Q ss_pred HHhhcC----------------------CCCCCcCChhhHHHhHHHHHhh
Q 004210 352 LNSLFN----------------------REPGRTINASECVARGCALQCA 379 (768)
Q Consensus 352 l~~~fg----------------------~~v~~~~n~~eava~Gaa~~a~ 379 (768)
|.+.+. .++..+.++..++=+|++++|.
T Consensus 346 L~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 346 LQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 886541 1223345677899999999985
No 32
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.22 E-value=5.6e-11 Score=105.18 Aligned_cols=82 Identities=17% Similarity=0.380 Sum_probs=75.6
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhh-HhhccCCHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHhHhHHHHh
Q 004210 576 KMERTKDRKNALESYVYEMRDKISN-IYRSFATESEREGISRNLRDTEEWLYEDGDDESENVYAERLEDLKKLVDPIEGR 654 (768)
Q Consensus 576 ~~~~~~~akN~LEs~iy~~r~~l~~-~~~~~~t~~e~~~l~~~l~~~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R 654 (768)
.++++.++||.||+|||.+|..|.+ .+...+++++++.|...|+++.+||+++ .+++.++|+.++++|+.++.||..|
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~-~~a~~e~i~~k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDAN-TLAEKDEFEHKRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999975 5888999999999999999999999985 5788999999999999999999999
Q ss_pred hHhH
Q 004210 655 YKDE 658 (768)
Q Consensus 655 ~~e~ 658 (768)
+...
T Consensus 82 ~y~~ 85 (113)
T 3lof_A 82 LYQG 85 (113)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8753
No 33
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.15 E-value=4.5e-10 Score=121.28 Aligned_cols=196 Identities=16% Similarity=0.146 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHc-CC--cceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCC
Q 004210 152 VQRRAYLDAATIA-GL--KPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDE 228 (768)
Q Consensus 152 ~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~ 228 (768)
.+-+.+.+|.+.+ |+ .+-. -||.||+++..... +.+-.+.++||||||||++++. ++.+ +.+. ..
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeD-----E~eLGvaiIDmGGGTTd~sVf~--~G~l-v~a~--~i 435 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTP-----GTTRPLAILDLGAGSTDASIIN--PKGD-IIAT--HL 435 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTST-----TCCSSEEEEEECSSEEEEEEEC--TTCC-EEEE--EE
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC-----CCcCCeEEEEeCCCcceEEEEc--CCcE-EEEE--Ee
Confidence 4467888999999 99 6666 89999998876543 5567799999999999999975 4433 1122 35
Q ss_pred CCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcc-CC---------CcccEEE--eccc----cC
Q 004210 229 SLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLS-AN---------AEAPLNI--ECLM----NE 292 (768)
Q Consensus 229 ~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls-~~---------~~~~i~i--~~l~----~~ 292 (768)
..||++++..|+.-|. .+. +..||++|. .. +. ....+.+ +.+. ..
T Consensus 436 p~gG~~VT~DIA~~Lg----------t~d--------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~R 496 (610)
T 2d0o_A 436 AGAGDMVTMIIARELG----------LED--------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFAR 496 (610)
T ss_dssp ECSHHHHHHHHHHHHT----------CCC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTC
T ss_pred ccchHHHHHHHHHHhC----------CCC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeee
Confidence 7899999999987663 110 178999998 52 11 1223444 2221 11
Q ss_pred -----cceEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHhcCC-----CCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004210 293 -----KDVKGFIRREE--FEKLSSSLLERMRIP--CQKALAGSGL-----NVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 293 -----~d~~~~itr~~--fe~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
.+--..| +.+ +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.++.+.++..+.|+.
T Consensus 497 v~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~ 574 (610)
T 2d0o_A 497 VCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAH 574 (610)
T ss_dssp EEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTT
T ss_pred eecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCc
Confidence 0112355 566 777 66555554443 3334554322 345789999999999999999999999976
Q ss_pred -CC-------CCcCChhhHHHhHHHHHhhH
Q 004210 359 -EP-------GRTINASECVARGCALQCAM 380 (768)
Q Consensus 359 -~v-------~~~~n~~eava~Gaa~~a~~ 380 (768)
++ ...-+|..|+|.|.+++.+.
T Consensus 575 y~VRiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 575 YRLVAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp SSCEEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred CCeEEecCCccccCCCcHHHHHHHHHHHhh
Confidence 43 22458999999999977643
No 34
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.13 E-value=3.3e-10 Score=122.87 Aligned_cols=193 Identities=15% Similarity=0.106 Sum_probs=131.2
Q ss_pred HHHHHHHHHHc-CC--cceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCC
Q 004210 154 RRAYLDAATIA-GL--KPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESL 230 (768)
Q Consensus 154 r~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~l 230 (768)
-+.+.+|.+.+ |+ .+-. -||.||+++..... +.+..+.++||||||||++++.- +.+ +.+. ....
T Consensus 372 m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTed-----E~elGvaiIDmGgGTTd~sVf~~--g~l-v~a~--~ip~ 439 (607)
T 1nbw_A 372 MQVIARELSARLQTEVVVGG--VEANMAIAGALTTP-----GCAAPLAILDLGAGSTDAAIVNA--EGQ-ITAV--HLAG 439 (607)
T ss_dssp SCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTST-----TCCSSEEEEEECSSEEEEEEECS--SSC-EEEE--EEEC
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC-----CCcCCeEEEEeCCCcceEEEEcC--CcE-EEEE--Eecc
Confidence 45678888888 99 5555 89999998876543 55677999999999999999763 333 1112 3578
Q ss_pred chhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcc-CC---------CcccEEE--eccc----cC--
Q 004210 231 GGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLS-AN---------AEAPLNI--ECLM----NE-- 292 (768)
Q Consensus 231 GG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls-~~---------~~~~i~i--~~l~----~~-- 292 (768)
||++++..|+.-|. .+. +..||++|. +. +. ....+.+ +.+. ..
T Consensus 440 gG~~VT~DIA~~Lg----------~~d--------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~ 500 (607)
T 1nbw_A 440 AGNMVSLLIKTELG----------LED--------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVV 500 (607)
T ss_dssp CHHHHHHHHHHHHT----------CSC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEE
T ss_pred chHHHHHHHHHHhC----------CCC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeee
Confidence 99999999987663 110 178999998 52 11 1223444 2221 11
Q ss_pred ---cceEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHhcCC-----CCCCcCEEEEecCCCChHHHHHHHHhhcCC-C
Q 004210 293 ---KDVKGFIRREE--FEKLSSSLLERMRIP--CQKALAGSGL-----NVEKIHSVELVGSGSRIPAISRMLNSLFNR-E 359 (768)
Q Consensus 293 ---~d~~~~itr~~--fe~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~V~LvGG~srip~v~~~l~~~fg~-~ 359 (768)
.+--..| +.+ +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.++.+.++..+.|+. +
T Consensus 501 ~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~ 578 (607)
T 1nbw_A 501 YIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYG 578 (607)
T ss_dssp EEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTT
T ss_pred cccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCC
Confidence 0112355 556 676 55555555543 4555776554 245679999999999999999999999975 4
Q ss_pred C-------CCcCChhhHHHhHHHHHhh
Q 004210 360 P-------GRTINASECVARGCALQCA 379 (768)
Q Consensus 360 v-------~~~~n~~eava~Gaa~~a~ 379 (768)
+ ...-+|..|+|.|.+++.+
T Consensus 579 VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 579 VVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp CEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred eEEecCCccccCCchHHHHHHHHHhhh
Confidence 3 2245899999999997643
No 35
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.12 E-value=2.5e-09 Score=123.63 Aligned_cols=94 Identities=16% Similarity=0.348 Sum_probs=73.7
Q ss_pred eEEEEeCCCCCHHHHHHHHHHH-HHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCe
Q 004210 140 NCVIGVPCYLTDVQRRAYLDAA-TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGH 218 (768)
Q Consensus 140 ~~VitVP~~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~ 218 (768)
.+++|.|..++...|+.|.+.+ +..|++.+.++.++.+|++++|. .+-+|||+|++.|.|+-|. +|.
T Consensus 200 pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~----------~tglVVDiG~~~T~v~PV~--dG~ 267 (593)
T 4fo0_A 200 RCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL----------SSTCIVDVGDQKTSVCCVE--DGV 267 (593)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC----------SEEEEEEECSSCEEEEEEE--SSC
T ss_pred cEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC----------CceEEEEeCCCceeeeeeE--CCE
Confidence 4999999999999998887765 66799999999999999988763 3579999999999988874 332
Q ss_pred EEEEEEeCCCCCchhhHHHHHHHHHHHH
Q 004210 219 MKILSHAFDESLGGRDFDEVLSSYFAAQ 246 (768)
Q Consensus 219 ~~vl~~~~~~~lGG~~~d~~l~~~l~~~ 246 (768)
. +....-...+||++++..|.+.|...
T Consensus 268 ~-l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 268 S-HRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp B-CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred E-ehhheEEecccHHHHHHHHHHHHHhc
Confidence 2 11111134699999999999888653
No 36
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=98.98 E-value=9.1e-10 Score=98.30 Aligned_cols=81 Identities=16% Similarity=0.366 Sum_probs=72.3
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhh-HhhccCCHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHhHhHHHHh
Q 004210 576 KMERTKDRKNALESYVYEMRDKISN-IYRSFATESEREGISRNLRDTEEWLYEDGDDESENVYAERLEDLKKLVDPIEGR 654 (768)
Q Consensus 576 ~~~~~~~akN~LEs~iy~~r~~l~~-~~~~~~t~~e~~~l~~~l~~~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R 654 (768)
.+|++.++||.||+|||.+|..|.+ .+...+++++++.|...|+++.+||+++ .+++.++|+.++++|+.++.||..|
T Consensus 12 ~~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~-~~ad~e~ik~k~~eL~~~~~~i~~k 90 (120)
T 2p32_A 12 SGLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSN-QTAEKEEFEHQQKDLEGLANPIISK 90 (120)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999975 4778999999999999999999999864 4678999999999999999999988
Q ss_pred hHh
Q 004210 655 YKD 657 (768)
Q Consensus 655 ~~e 657 (768)
+..
T Consensus 91 ~y~ 93 (120)
T 2p32_A 91 LYQ 93 (120)
T ss_dssp HCC
T ss_pred HHH
Confidence 763
No 37
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.93 E-value=6.8e-08 Score=99.46 Aligned_cols=172 Identities=17% Similarity=0.142 Sum_probs=100.4
Q ss_pred ceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHHHHHHH
Q 004210 168 PLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSYFAAQF 247 (768)
Q Consensus 168 ~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~ 247 (768)
...+++|.+|.+.+...... ..-.|+|+||+++.+..+ .++.+.-......+..|+-.|- +++...+
T Consensus 76 ~~~~v~Ei~ah~~ga~~~~~-------~~~~vidiGGqd~k~i~~--~~g~v~~~~mn~~ca~GtG~~l----e~~a~~l 142 (270)
T 1hux_A 76 ADKQMSELSCHAMGASFIWP-------NVHTVIDIGGQDVKVIHV--ENGTMTNFQMNDKCAAGTGRFL----DVMANIL 142 (270)
T ss_dssp CSEEECHHHHHHHHHHHHCT-------TCCEEEEEETTEEEEEEE--ETTEEEEEEEESSCCTTSHHHH----HHHHHHH
T ss_pred CCCCcccHHHHHHHHHHhCC-------CCCEEEEECCCceEEEEE--eCCceeeeccccccchhhHHHH----HHHHHHh
Confidence 34679999999866533221 112589999998887776 5676543445544555554443 4444333
Q ss_pred hhhcccCccCChHHHHHHHHHHHHHhhhccCCCcccEEEeccccCcceEEEecHHHH----------HHHHHHHHHHHHH
Q 004210 248 KQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEF----------EKLSSSLLERMRI 317 (768)
Q Consensus 248 ~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~~f----------e~~~~~~~~~i~~ 317 (768)
++++.. +. +.+.+.+.-+....... .+.+.++ +.++..+++.+..
T Consensus 143 ----g~~~~e----l~---~la~~~~~p~~~~~~c~--------------vfa~s~v~~l~~~g~~~~di~~av~e~Va~ 197 (270)
T 1hux_A 143 ----EVKVSD----LA---ELGAKSTKRVAISSTCT--------------VFAESEVISQLSKGTDKIDIIAGIHRSVAS 197 (270)
T ss_dssp ----TCCTTT----HH---HHHTTCCSCCCCCCCSH--------------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ----CCCHHH----HH---HHHhhCCCCCCcccccc--------------hhHhHHHHHHhhCCCCHHHHHHHHHHHHHH
Confidence 233211 11 11111111110000000 1122222 3344444444444
Q ss_pred HHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhhHh
Q 004210 318 PCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAML 381 (768)
Q Consensus 318 ~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~~l 381 (768)
.+.+.++..++ .+.|+++||.++.|.+++.+.+.+|.++..+.+++.+.|+|||++|...
T Consensus 198 ~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 198 RVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 44445544322 3679999999999999999999999988888888889999999998754
No 38
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.88 E-value=1.3e-09 Score=96.45 Aligned_cols=77 Identities=16% Similarity=0.398 Sum_probs=67.9
Q ss_pred HHHHHhhHHHHHHHHHHHHhh-HhhccCCHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHhHhHHHHhhHh
Q 004210 580 TKDRKNALESYVYEMRDKISN-IYRSFATESEREGISRNLRDTEEWLYEDGDDESENVYAERLEDLKKLVDPIEGRYKD 657 (768)
Q Consensus 580 ~~~akN~LEs~iy~~r~~l~~-~~~~~~t~~e~~~l~~~l~~~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 657 (768)
+.++||.||+|||.+|..|.+ .+...+++++|+.|...|.++.+||.++ .+++.++|++++++|+.++.||..|+.+
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~-~~ad~~~i~~~~~~L~~~~~~i~~~~~~ 79 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKN-QTAEKEEFEHQQKELEKVCNPIITKLYQ 79 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568899999999999999973 5788999999999999999999999743 4578899999999999999999988764
No 39
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.30 E-value=3.7e-05 Score=78.85 Aligned_cols=75 Identities=9% Similarity=-0.021 Sum_probs=52.5
Q ss_pred ecHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecC-CCChHHHHHHHHhhc---CCCCCCcCChhhHHHhH
Q 004210 299 IRREEFE-KLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGS-GSRIPAISRMLNSLF---NREPGRTINASECVARG 373 (768)
Q Consensus 299 itr~~fe-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG-~srip~v~~~l~~~f---g~~v~~~~n~~eava~G 373 (768)
.+++++- .++.-+.+++..+.....+..+ ++.|+++|| .+..|.+++.+++.+ +.++..+.++..+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 4555543 2233334444444443334443 456999999 899999999999985 57788899999999999
Q ss_pred HHHHh
Q 004210 374 CALQC 378 (768)
Q Consensus 374 aa~~a 378 (768)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
No 40
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.76 E-value=6.8e-05 Score=84.04 Aligned_cols=126 Identities=20% Similarity=0.346 Sum_probs=89.9
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCC
Q 004210 139 SNCVIGVPCYLTDVQRRAYLDAA-TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENG 217 (768)
Q Consensus 139 ~~~VitVP~~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~ 217 (768)
..+++|.|+.++...|+.+.+.+ +..|++.+.++.++.||++++|. ...-||+|+|+|+|+++.+. .|
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl---------~ttGLVVDiG~g~T~VvPV~--eG 290 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI---------STSTCVVNIGAAETRIACVD--EG 290 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC---------SSCEEEEEECSSCEEEEEEE--TT
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC---------CCceEEEcCCCceEEEEEEe--CC
Confidence 47999999999999999998887 56899999999999999987753 24579999999999999984 33
Q ss_pred eEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhccc-CccCChHHHHHHHHHHHHHhhhccCCCcc
Q 004210 218 HMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDI-DVYTNVKASIRLRASCEKLKKVLSANAEA 282 (768)
Q Consensus 218 ~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~-~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~ 282 (768)
.. +........+||++++..|.++|..+- |.. +..-+... =+..++.+|+.++.-...
T Consensus 291 ~v-l~~ai~rL~iGG~dLT~yL~kLL~~rg---ypy~~~~f~t~~---e~eiVrdIKEk~CyVs~~ 349 (655)
T 4am6_A 291 TV-LEHSAITLDYGGDDITRLFALFLLQSD---FPLQDWKIDSKH---GWLLAERLKKNFTTFQDA 349 (655)
T ss_dssp EE-CGGGCEEESCCHHHHHHHHHHHHHHTT---CSCCSCCTTSHH---HHHHHHHHHHHHCCCCGG
T ss_pred EE-EhhheeeecchHHHHHHHHHHHHHHcC---CCccccCCCCcc---hHHHHHHHHHheEEEccc
Confidence 21 111111357999999999999987541 100 11111111 126678889988765333
No 41
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=97.16 E-value=0.069 Score=56.05 Aligned_cols=66 Identities=12% Similarity=-0.032 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhc---CCCCCCcC---ChhhHHHhHHHHHhhHh
Q 004210 311 LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF---NREPGRTI---NASECVARGCALQCAML 381 (768)
Q Consensus 311 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f---g~~v~~~~---n~~eava~Gaa~~a~~l 381 (768)
+.+.+...+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++..+. -.|.++++|+|.+....
T Consensus 228 l~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~ 299 (330)
T 2ivn_A 228 AFAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYK 299 (330)
T ss_dssp HHHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHh
Confidence 33444445555555443 567999999999999999999877 55554444 23778999998765443
No 42
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.88 E-value=0.017 Score=60.77 Aligned_cols=69 Identities=16% Similarity=0.057 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHHHH----HHhcCCCCCCcCEEEEecC-CCChHHHHHHHHhhcC------CCCCCcCChhhHHHhH
Q 004210 305 EKLSSSLLERMRIPCQKA----LAGSGLNVEKIHSVELVGS-GSRIPAISRMLNSLFN------REPGRTINASECVARG 373 (768)
Q Consensus 305 e~~~~~~~~~i~~~i~~~----l~~~~~~~~~i~~V~LvGG-~srip~v~~~l~~~fg------~~v~~~~n~~eava~G 373 (768)
++++..++..+..-|-.. .+..+ ++.|+++|| .+..|.+++.|++.++ .++..+.++..+.|+|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 445555555554444333 23444 345999999 9999999999999863 5677788999999999
Q ss_pred HHHHh
Q 004210 374 CALQC 378 (768)
Q Consensus 374 aa~~a 378 (768)
||+.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
No 43
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.87 E-value=0.038 Score=57.28 Aligned_cols=44 Identities=18% Similarity=0.175 Sum_probs=29.5
Q ss_pred cCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004210 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++-...... ....+++++-+|.| +-.+++
T Consensus 98 ~~~p-v~v~NDa~aaal~E~~~g~~---~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 98 TGRP-VFLENDANAAALAEHHLGAA---QGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEechHHHHHHHHHhCCC---CCCCCEEEEEECCc-eeEEEE
Confidence 4665 58999999999876544321 23456888888887 444444
No 44
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.73 E-value=0.17 Score=52.74 Aligned_cols=45 Identities=20% Similarity=0.250 Sum_probs=31.1
Q ss_pred cCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEE
Q 004210 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 213 (768)
.|++ +.+.|+..|+|++....... ....+++++-+|.| +-.+++.
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~---~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAG---QGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCC---CCCCCEEEEEeCcc-eEEEEEE
Confidence 3776 68999999999886543221 23467888889988 5555553
No 45
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.61 E-value=0.22 Score=51.27 Aligned_cols=48 Identities=10% Similarity=0.061 Sum_probs=35.7
Q ss_pred CcCEEEEecCCCChHHHHHHHHhhcC-CCCCCcCChhhHHHhHHHHHhhH
Q 004210 332 KIHSVELVGSGSRIPAISRMLNSLFN-REPGRTINASECVARGCALQCAM 380 (768)
Q Consensus 332 ~i~~V~LvGG~srip~v~~~l~~~fg-~~v~~~~n~~eava~Gaa~~a~~ 380 (768)
+.+.|+|.||.+..+.+.+.+++.+. .++..+. .+.+.++||++.+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 45679999998776888888887774 3555555 667889999987753
No 46
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.60 E-value=0.47 Score=49.65 Aligned_cols=68 Identities=13% Similarity=0.014 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhc---CCCCCCcCC---hhhHHHhHHHHHhhHhcC
Q 004210 311 LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF---NREPGRTIN---ASECVARGCALQCAMLSP 383 (768)
Q Consensus 311 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f---g~~v~~~~n---~~eava~Gaa~~a~~ls~ 383 (768)
+.+.+...+.++++..+ ++.|+|+||.+....+++.|.+.+ |.++..+.. .|.++++|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 44455556666666655 467999999999999999999887 545544433 488999999876654443
No 47
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.54 E-value=0.014 Score=60.92 Aligned_cols=77 Identities=12% Similarity=0.050 Sum_probs=49.7
Q ss_pred HHHHHHHHHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhh
Q 004210 155 RAYLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRD 234 (768)
Q Consensus 155 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~ 234 (768)
..+..+-+..|+++-.|-.|.+|.....+.... ++ .....+|+|+|||||.+++++ ++.+ .. ..+.++|+..
T Consensus 101 ~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~-l~--~~~~~lvvDIGGGStEl~~~~--~~~~--~~-~~Sl~~G~v~ 172 (315)
T 1t6c_A 101 EFLERVKREVGLVVEVITPEQEGRYAYLAVAYS-LK--PEGEVCVVDQGGGSTEYVFGK--GYKV--RE-VISLPIGIVN 172 (315)
T ss_dssp HHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHH-TC--CCSEEEEEEEETTEEEEEEEE--TTEE--EE-EEEECCCHHH
T ss_pred HHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhh-cc--cCCCEEEEEeCCCcEEEEEEe--CCce--ee-EEEEeccHHH
Confidence 344444457899975555555665544444332 22 245799999999999999975 4444 22 2246899988
Q ss_pred HHHHH
Q 004210 235 FDEVL 239 (768)
Q Consensus 235 ~d~~l 239 (768)
+.+.+
T Consensus 173 l~e~~ 177 (315)
T 1t6c_A 173 LTETF 177 (315)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87765
No 48
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.50 E-value=0.024 Score=63.45 Aligned_cols=83 Identities=13% Similarity=0.209 Sum_probs=57.3
Q ss_pred ecHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHH
Q 004210 299 IRREEFEKLSS-SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQ 377 (768)
Q Consensus 299 itr~~fe~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~ 377 (768)
-+|.+|-..+- .+.-.+...++..-+..|. .++.|.++||+++.+.+.+.+.+.||.++... .+.|+.|+|||+.
T Consensus 372 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 447 (506)
T 3h3n_X 372 TTKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYL 447 (506)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHH
Confidence 35666544332 2333333333332222454 47789999999999999999999999888554 4677999999999
Q ss_pred hhHhcCCc
Q 004210 378 CAMLSPQY 385 (768)
Q Consensus 378 a~~ls~~~ 385 (768)
|+.-.+.+
T Consensus 448 A~~a~G~~ 455 (506)
T 3h3n_X 448 AGLAVGFW 455 (506)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 98766654
No 49
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=96.30 E-value=1.2 Score=46.79 Aligned_cols=46 Identities=7% Similarity=0.019 Sum_probs=34.3
Q ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHH-cC--CcceEeccchHHHHHHh
Q 004210 137 PISNCVIGVPCYLTDVQRRAYLDAATI-AG--LKPLRLMHDCTATALGY 182 (768)
Q Consensus 137 ~~~~~VitVP~~~~~~qr~~l~~Aa~~-AG--l~~~~li~Ep~Aaal~y 182 (768)
.+..+.|++|...+......+.+..+. .| .-.+.+.|+..|+|+++
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~ 118 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA 118 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh
Confidence 577899999999887665566665544 34 13568999999999883
No 50
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=96.28 E-value=0.019 Score=50.00 Aligned_cols=73 Identities=23% Similarity=0.456 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh----CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHH
Q 004210 657 DEEARAQATGALLKCAMDYRKVVEA----HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEA 732 (768)
Q Consensus 657 e~~~rp~a~~~l~~~l~~~~~~~~~----~~~~~ee~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~ 732 (768)
++.++-++...+.+.+..+++.+.. ..++++++..|...|+++..||+. ++.....+|+.|++.
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~------------~~~a~~e~i~~k~~e 70 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDA------------NTLAEKDEFEHKRKE 70 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHH------------CTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHc------------CCcCCHHHHHHHHHH
Confidence 3455666777777777777777733 349999999999999999999976 222357899999999
Q ss_pred HHHHhhhhc
Q 004210 733 LDLTCKCIM 741 (768)
Q Consensus 733 l~~~~~~i~ 741 (768)
|+..|.+|+
T Consensus 71 L~~~~~~i~ 79 (113)
T 3lof_A 71 LEQVCNPII 79 (113)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999998
No 51
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=96.25 E-value=0.16 Score=52.26 Aligned_cols=49 Identities=8% Similarity=0.027 Sum_probs=34.3
Q ss_pred CcCEEEEecCCCChHHHHHHHHhhcCC------CCCCcCChhhHHHhHHHHHhhH
Q 004210 332 KIHSVELVGSGSRIPAISRMLNSLFNR------EPGRTINASECVARGCALQCAM 380 (768)
Q Consensus 332 ~i~~V~LvGG~srip~v~~~l~~~fg~------~v~~~~n~~eava~Gaa~~a~~ 380 (768)
+.+.|+|-||.+..+.+.+.|++.+.. ++......+.+.++|||..+..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 456799999988777666666666531 2334445678999999987753
No 52
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.20 E-value=0.018 Score=60.35 Aligned_cols=46 Identities=13% Similarity=0.190 Sum_probs=31.0
Q ss_pred Hc-CCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEE
Q 004210 163 IA-GLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 163 ~A-Gl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 213 (768)
.. |++ +.+.|+..|+|++-...... ....+++++-+|.| +-.+++.
T Consensus 116 ~~~~~p-V~v~NDa~aaalaE~~~g~~---~~~~~~v~l~~GtG-iG~gii~ 162 (321)
T 3r8e_A 116 EFPHIH-FKIENDAKCAALGEYYFGEN---KRMQTFILLALGTG-VGSGVMM 162 (321)
T ss_dssp HCTTSE-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEEE
T ss_pred HcCCCC-EEEEchHHHHHHHHHHhCCC---CCCCcEEEEEECCc-eEEEEEE
Confidence 35 665 58999999999876544321 23466888889988 5555543
No 53
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=96.20 E-value=0.93 Score=47.22 Aligned_cols=44 Identities=14% Similarity=0.046 Sum_probs=30.6
Q ss_pred cCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004210 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++-...... ....+++++-+|.| +-.+++
T Consensus 120 ~~~p-V~v~NDa~aaalgE~~~g~~---~~~~~~~~l~~GtG-iG~gii 163 (327)
T 4db3_A 120 IGRS-VKIENDANCFALSEAWDEEL---QDAPSVMGLILGTG-FGGGLI 163 (327)
T ss_dssp HSSC-CEEEEHHHHHHHHHHTSTTT---TTCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecchhHHHHHHHHhCCC---CCCCcEEEEEeCcc-ceEEEE
Confidence 4776 68999999999976544321 23567888888888 444554
No 54
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.09 E-value=0.0083 Score=68.04 Aligned_cols=84 Identities=12% Similarity=0.162 Sum_probs=62.0
Q ss_pred EecHHHHHHHHHHHHHHHHHHHHHH---HHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHH
Q 004210 298 FIRREEFEKLSSSLLERMRIPCQKA---LAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGC 374 (768)
Q Consensus 298 ~itr~~fe~~~~~~~~~i~~~i~~~---l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Ga 374 (768)
.-+|.+|-.++..+++.+.-.++.. |++.|. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+||
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~alGA 483 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGY---NIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLLGS 483 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHHHH
Confidence 4578888544555555554444433 344443 47889999999999999999999999888665 4467999999
Q ss_pred HHHhhHhcCCc
Q 004210 375 ALQCAMLSPQY 385 (768)
Q Consensus 375 a~~a~~ls~~~ 385 (768)
|+.|+.-.+.+
T Consensus 484 A~lA~~a~G~~ 494 (554)
T 3l0q_A 484 AMMGTVAAGVF 494 (554)
T ss_dssp HHHHHHHTTSS
T ss_pred HHHHHHHcCCc
Confidence 99998766544
No 55
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.86 E-value=0.012 Score=66.30 Aligned_cols=77 Identities=16% Similarity=0.131 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhhHhcC
Q 004210 306 KLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSP 383 (768)
Q Consensus 306 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~~ls~ 383 (768)
.+++.+++.+.-.++..++..+.....++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.|+.-.+
T Consensus 408 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 408 VEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHhC
Confidence 3444455555555555555544333457889999999999999999999999888654 4578999999999976443
No 56
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.84 E-value=0.012 Score=65.84 Aligned_cols=81 Identities=21% Similarity=0.180 Sum_probs=57.1
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCC-CCcCChhhHHHhHHHHH
Q 004210 299 IRREEFEKLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREP-GRTINASECVARGCALQ 377 (768)
Q Consensus 299 itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v-~~~~n~~eava~Gaa~~ 377 (768)
-+|.+|-. .+++.+.-.++..++...- .. ++.|.++||+++.+.+.+.+.+.||.++ .. ..+.|+.|+|||+.
T Consensus 374 ~~~~~l~R---AvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~~e~~alGaA~l 447 (511)
T 3hz6_A 374 TTRAQILL---AVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVK-PDAHLHPLRGLAAL 447 (511)
T ss_dssp CCHHHHHH---HHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEEC-CCGGGHHHHHHHHH
T ss_pred CCHHHHHH---HHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEe-cCCCCchHHHHHHH
Confidence 35666543 3444443333333333211 22 7889999999999999999999999888 54 45889999999999
Q ss_pred hhHhcCCc
Q 004210 378 CAMLSPQY 385 (768)
Q Consensus 378 a~~ls~~~ 385 (768)
|+.-.+.+
T Consensus 448 A~~a~G~~ 455 (511)
T 3hz6_A 448 AAVELEWS 455 (511)
T ss_dssp HHHHTTSC
T ss_pred HHHHhCCc
Confidence 98766543
No 57
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.82 E-value=0.016 Score=64.96 Aligned_cols=79 Identities=27% Similarity=0.328 Sum_probs=55.4
Q ss_pred cHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHh
Q 004210 300 RREEFEKLSS-SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQC 378 (768)
Q Consensus 300 tr~~fe~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a 378 (768)
+|.++-..+- .+.-.+...+ +.|++.|. .++.|.++||+++.|.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l-~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA 469 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCL-ELIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQA 469 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-HHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHH
Confidence 6666544332 2222333333 34445554 47889999999999999999999999888654 45678899999999
Q ss_pred hHhcC
Q 004210 379 AMLSP 383 (768)
Q Consensus 379 ~~ls~ 383 (768)
+.-.+
T Consensus 470 ~~a~G 474 (515)
T 3i8b_A 470 AWVLS 474 (515)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 86544
No 58
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.81 E-value=0.01 Score=66.07 Aligned_cols=53 Identities=23% Similarity=0.249 Sum_probs=45.3
Q ss_pred CcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhhHhcCC
Q 004210 332 KIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSPQ 384 (768)
Q Consensus 332 ~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~~ls~~ 384 (768)
.++.|.++||+++.+.+.+.+.+.+|.++......+.+.|+|||+.|+.-.+.
T Consensus 386 ~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~ 438 (484)
T 2itm_A 386 KPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANP 438 (484)
T ss_dssp CCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHCT
T ss_pred CcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcCC
Confidence 46789999999999999999999999998777665556899999999875543
No 59
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.80 E-value=0.014 Score=65.29 Aligned_cols=80 Identities=18% Similarity=0.215 Sum_probs=56.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhh
Q 004210 300 RREEFEKLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCA 379 (768)
Q Consensus 300 tr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~ 379 (768)
+|.++- +.+++.+.-.++..++...-.. .++.|.++||+++.+.+.+.+.+.||.++..... .|+.|+|||+.|+
T Consensus 365 ~~~~l~---rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~-~e~~alGaA~lA~ 439 (497)
T 2zf5_O 365 GREHLA---RATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRPVV-KETTALGAAYLAG 439 (497)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEESC-SCHHHHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEcCC-CcchHHHHHHHHH
Confidence 555543 3444444444444444332222 5788999999999999999999999988865544 5699999999998
Q ss_pred HhcCC
Q 004210 380 MLSPQ 384 (768)
Q Consensus 380 ~ls~~ 384 (768)
.-.+.
T Consensus 440 ~~~g~ 444 (497)
T 2zf5_O 440 LAVDY 444 (497)
T ss_dssp HHTTS
T ss_pred HHhCc
Confidence 76554
No 60
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.65 E-value=0.21 Score=52.07 Aligned_cols=44 Identities=20% Similarity=0.290 Sum_probs=30.0
Q ss_pred cCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004210 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++....... ....+++++-+|.| +-.+++
T Consensus 108 ~~~p-v~v~ND~~aaa~~e~~~g~~---~~~~~~~~l~~GtG-iG~giv 151 (326)
T 2qm1_A 108 LGIP-FALDNDANVAALGERWKGAG---ENNPDVIFITLGTG-VGGGIV 151 (326)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEecHHHHHHHHHHHhCCC---CCCCcEEEEEECCc-eEEEEE
Confidence 4776 68999999999875443211 23457888889988 455555
No 61
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.64 E-value=0.019 Score=64.30 Aligned_cols=81 Identities=15% Similarity=0.066 Sum_probs=56.8
Q ss_pred cHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHh
Q 004210 300 RREEFEKLSSS-LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQC 378 (768)
Q Consensus 300 tr~~fe~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a 378 (768)
+|.+|-..+-+ +.-.+...+ +.|++.|. .++.|.++||+++.+.+.+.+.+.||.++..... .|+.|+|||+.|
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~-~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA 445 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHV-AVLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVA 445 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHH
Confidence 56665443332 222333333 33444454 4788999999999999999999999998866654 568899999999
Q ss_pred hHhcCCc
Q 004210 379 AMLSPQY 385 (768)
Q Consensus 379 ~~ls~~~ 385 (768)
+.-.+.+
T Consensus 446 ~~a~G~~ 452 (508)
T 3ifr_A 446 AIGGGDD 452 (508)
T ss_dssp HHHTCSS
T ss_pred HHHhCCC
Confidence 8766543
No 62
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.63 E-value=0.019 Score=64.28 Aligned_cols=79 Identities=9% Similarity=0.064 Sum_probs=56.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHH---HHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHH
Q 004210 300 RREEFEKLSSSLLERMRIPCQ---KALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCAL 376 (768)
Q Consensus 300 tr~~fe~~~~~~~~~i~~~i~---~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~ 376 (768)
+|.+|-.. +++.+.-.++ +.|++.+. .++.|.++||+++.+.+.+.+.+.||.++... .+.|+.|+|||+
T Consensus 364 ~~~~l~RA---vlEgia~~~r~~~~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~ 436 (504)
T 3ll3_A 364 QKPEMARA---VIEGIIFNLYDAASNLIKNTK---KPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLAAMF 436 (504)
T ss_dssp CHHHHHHH---HHHHHHHHHHHHHHHHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHH
T ss_pred CHHHHHHH---HHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHHHHH
Confidence 56665443 3333333332 34444443 57899999999999999999999999988654 456799999999
Q ss_pred HhhHhcCCc
Q 004210 377 QCAMLSPQY 385 (768)
Q Consensus 377 ~a~~ls~~~ 385 (768)
.|+.-.+.+
T Consensus 437 lA~~a~G~~ 445 (504)
T 3ll3_A 437 LARQALGLN 445 (504)
T ss_dssp HHHHHTTSC
T ss_pred HHHHHcCcc
Confidence 998766543
No 63
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.52 E-value=0.023 Score=63.51 Aligned_cols=82 Identities=20% Similarity=0.257 Sum_probs=57.1
Q ss_pred cHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHh
Q 004210 300 RREEFEKLSS-SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQC 378 (768)
Q Consensus 300 tr~~fe~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a 378 (768)
+|.+|-..+- .+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~la 449 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFLA 449 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHHH
Confidence 5666544332 2333333333333222454 47889999999999999999999999888554 46779999999999
Q ss_pred hHhcCCc
Q 004210 379 AMLSPQY 385 (768)
Q Consensus 379 ~~ls~~~ 385 (768)
+.-.+.+
T Consensus 450 ~~a~G~~ 456 (501)
T 3g25_A 450 GLAVGFW 456 (501)
T ss_dssp HHHTTSS
T ss_pred HHHhCcc
Confidence 8766654
No 64
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=95.42 E-value=1.8 Score=44.02 Aligned_cols=42 Identities=17% Similarity=0.082 Sum_probs=28.8
Q ss_pred cCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004210 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|||++... .. ....+++++-+|.| +-.+++
T Consensus 94 ~~~p-v~v~NDa~aaa~~e~~-~~----~~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 94 YQLP-VHLENDANCVGLSELL-AH----PELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GCCC-EEEEEHHHHHHHHHHH-HC----TTCSSEEEEEESSS-EEEEEE
T ss_pred cCCC-EEEechHHHHHHHHHH-hc----CCCCeEEEEEECCc-eEEEEE
Confidence 4765 6899999999988654 21 23456888888887 445554
No 65
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.38 E-value=0.023 Score=63.91 Aligned_cols=83 Identities=14% Similarity=0.225 Sum_probs=58.1
Q ss_pred ecHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHH
Q 004210 299 IRREEFEKLSS-SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQ 377 (768)
Q Consensus 299 itr~~fe~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~ 377 (768)
-+|.++-..+- .+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~l 446 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYL 446 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHHH
Confidence 45666544332 2222333333333334565 47889999999999999999999999888655 4467899999999
Q ss_pred hhHhcCCc
Q 004210 378 CAMLSPQY 385 (768)
Q Consensus 378 a~~ls~~~ 385 (768)
|+.-.+.+
T Consensus 447 A~~a~G~~ 454 (526)
T 3ezw_A 447 AGLAVGFW 454 (526)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCCC
Confidence 98877654
No 66
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.20 E-value=0.026 Score=64.23 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=55.8
Q ss_pred cHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCC-ChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHH
Q 004210 300 RREEFEKLSSS-LLERMRIPCQKALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLFNREPGRTINASECVARGCALQ 377 (768)
Q Consensus 300 tr~~fe~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~ 377 (768)
+|.+|-..+-+ +.-.+...+ +.|++.|. .++.|.++||++ +.+.+.+++.+.||.++... .+.|+.|+|||+.
T Consensus 410 t~~~l~RAvlEgia~~~r~~~-~~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEEIYRALLEATAFGTRAIV-DAFHGRGV---EVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHHHH
Confidence 66665443322 222222222 34444443 478999999999 99999999999999888554 4578999999999
Q ss_pred hhHhcC
Q 004210 378 CAMLSP 383 (768)
Q Consensus 378 a~~ls~ 383 (768)
|+.-.+
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 987655
No 67
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.15 E-value=0.03 Score=62.70 Aligned_cols=82 Identities=15% Similarity=0.215 Sum_probs=56.0
Q ss_pred cHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHh
Q 004210 300 RREEFEKLSS-SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQC 378 (768)
Q Consensus 300 tr~~fe~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a 378 (768)
+|.++-..+- .+.-.+...++..-+..|. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 446 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLA 446 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHHH
Confidence 5666544332 2323333333322222354 47889999999999999999999999888654 45679999999999
Q ss_pred hHhcCCc
Q 004210 379 AMLSPQY 385 (768)
Q Consensus 379 ~~ls~~~ 385 (768)
+.-.+.+
T Consensus 447 ~~a~G~~ 453 (510)
T 2p3r_A 447 GLAVGFW 453 (510)
T ss_dssp HHHHTSS
T ss_pred HHHhCcc
Confidence 8765543
No 68
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=95.08 E-value=0.22 Score=51.04 Aligned_cols=43 Identities=16% Similarity=0.026 Sum_probs=30.1
Q ss_pred cCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004210 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++....... ... +++++-+|.| +-.+++
T Consensus 96 ~~~p-v~v~NDa~aaa~~e~~~g~~---~~~-~~v~l~~GtG-iG~gii 138 (289)
T 2aa4_A 96 TNLP-TIAINDAQAAAWAEFQALDG---DIT-DMVFITVSTG-VGGGVV 138 (289)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSCT---TCC-CEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechHHHHHHHHHHhCCC---CCc-eEEEEEeCcc-EEEEEE
Confidence 4775 68999999999876544321 223 7889999988 455554
No 69
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=94.96 E-value=0.034 Score=62.09 Aligned_cols=80 Identities=13% Similarity=0.142 Sum_probs=54.7
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHh
Q 004210 300 RREEFEK-LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQC 378 (768)
Q Consensus 300 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a 378 (768)
+|.++-. +++.+.-.+...++..-+..+. .++.|.++||+++.+.+.+.+.+.+|.++... .+.|+.|+|||+.|
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMA 443 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHH
Confidence 5655443 2333333333344332222343 36779999999999999999999999888654 44568999999999
Q ss_pred hHhcC
Q 004210 379 AMLSP 383 (768)
Q Consensus 379 ~~ls~ 383 (768)
+.-.+
T Consensus 444 ~~a~G 448 (495)
T 2dpn_A 444 GVGAG 448 (495)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 86554
No 70
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=94.91 E-value=0.037 Score=62.08 Aligned_cols=53 Identities=15% Similarity=0.068 Sum_probs=44.2
Q ss_pred CcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhhHhcCCc
Q 004210 332 KIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSPQY 385 (768)
Q Consensus 332 ~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~~ls~~~ 385 (768)
.++.|.++||+++.|.+.+++.+.||.++... ...|+.|+|||+.|+.-.+.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWLAGSRAGVW 477 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHHHHHHcCCc
Confidence 47789999999999999999999999988654 456799999999998766543
No 71
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.85 E-value=0.051 Score=60.75 Aligned_cols=81 Identities=14% Similarity=0.124 Sum_probs=56.6
Q ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHh
Q 004210 300 RREEFEKL-SSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQC 378 (768)
Q Consensus 300 tr~~fe~~-~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a 378 (768)
+|.++-.. ++.+.-.+...++..-+..|. .++.|.++||+++.+.+.+.+.+.||.++... .+.|+.|+|||+.|
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA 448 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAA 448 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHH
Confidence 56665543 233333344444433233454 36789999999999999999999999888654 44678999999999
Q ss_pred hHhcCC
Q 004210 379 AMLSPQ 384 (768)
Q Consensus 379 ~~ls~~ 384 (768)
+.-.+.
T Consensus 449 ~~~~G~ 454 (504)
T 2d4w_A 449 GIAVGF 454 (504)
T ss_dssp HHHHTS
T ss_pred HhhcCc
Confidence 876554
No 72
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.69 E-value=0.057 Score=60.35 Aligned_cols=81 Identities=10% Similarity=0.145 Sum_probs=55.5
Q ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCCc-CEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHH
Q 004210 300 RREEFEKL-SSSLLERMRIPCQKALAGSGLNVEKI-HSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQ 377 (768)
Q Consensus 300 tr~~fe~~-~~~~~~~i~~~i~~~l~~~~~~~~~i-~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~ 377 (768)
+|.++-.. ++.+.-.+...++..-+..+. .+ +.|.++||+++.+.+.+.+.+.+|.++... ...|+.|+|||+.
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~l 451 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVL 451 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHH
Confidence 56555443 233333334444333222353 35 679999999999999999999999888654 4556899999999
Q ss_pred hhHhcCC
Q 004210 378 CAMLSPQ 384 (768)
Q Consensus 378 a~~ls~~ 384 (768)
|+.-.+.
T Consensus 452 a~~~~G~ 458 (503)
T 2w40_A 452 AGLEVKI 458 (503)
T ss_dssp HHHHTTC
T ss_pred HHHHhCc
Confidence 9876554
No 73
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=94.59 E-value=0.12 Score=53.69 Aligned_cols=78 Identities=10% Similarity=0.100 Sum_probs=46.6
Q ss_pred HHHHHHHHHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhh
Q 004210 155 RAYLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRD 234 (768)
Q Consensus 155 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~ 234 (768)
..+..+-+..|+++--|-.+-+|.....+.... ++ ......+|+|+|||+|.+++++ ++.+ ... ...++|.-.
T Consensus 93 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~-~~-~~~~~~lviDIGGGStEl~~~~--~~~~--~~~-~Sl~lG~vr 165 (315)
T 3mdq_A 93 VLIDRIKKEVNIDVEVIDGAREAELIFRGVQQA-VP-MEDHISLAMDIGGGSVEFIIGN--KNEI--LWK-QSFEIGGQR 165 (315)
T ss_dssp HHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHH-SC-CTTCCEEEEEECSSCEEEEEEC--SSCE--EEE-EEESCCHHH
T ss_pred HHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhc-CC-CCCCCEEEEEeCCCceEEEEEE--CCeE--eee-EEEechhhH
Confidence 344555566799974444444554433343322 22 1235699999999999999986 3433 222 145788877
Q ss_pred HHHHH
Q 004210 235 FDEVL 239 (768)
Q Consensus 235 ~d~~l 239 (768)
+.+.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 76543
No 74
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.54 E-value=0.058 Score=60.08 Aligned_cols=78 Identities=15% Similarity=0.031 Sum_probs=52.7
Q ss_pred EEecHHHHHHHHH-HHHHHHHHHHHHHHHh-cCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHH
Q 004210 297 GFIRREEFEKLSS-SLLERMRIPCQKALAG-SGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGC 374 (768)
Q Consensus 297 ~~itr~~fe~~~~-~~~~~i~~~i~~~l~~-~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Ga 374 (768)
..-+|.+|-+.+- .+.-.+...++. |++ .|. .++.|.++||+++.+.+.+.+.+.||.++.... .|+.|+||
T Consensus 360 ~~~t~~~l~RAvlEgia~~~r~~~~~-l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGa 433 (489)
T 2uyt_A 360 IPESDAELARCIFDSLALLYADVLHE-LAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGN 433 (489)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHH
Confidence 3446766654332 333333333333 333 443 367899999999999999999999998886443 58999999
Q ss_pred HHHhhH
Q 004210 375 ALQCAM 380 (768)
Q Consensus 375 a~~a~~ 380 (768)
|+.|..
T Consensus 434 a~~A~~ 439 (489)
T 2uyt_A 434 IGIQLM 439 (489)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666544
No 75
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=94.44 E-value=0.96 Score=47.04 Aligned_cols=44 Identities=16% Similarity=0.020 Sum_probs=29.4
Q ss_pred cCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004210 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++....... ....+++++-+|.| +-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~---~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEF---TQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTG---GGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcC---CCCCcEEEEEECCc-EEEEEE
Confidence 4666 68999999999875433211 12467888888988 445554
No 76
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=94.40 E-value=1.8 Score=43.48 Aligned_cols=45 Identities=16% Similarity=0.213 Sum_probs=29.5
Q ss_pred cCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004210 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++....... ......++++-+|.| .-.+++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~--~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAG--AGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTT--TTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCC--CCCCCcEEEEEECcc-eEEEEE
Confidence 4776 69999999999986543321 011236778888887 555554
No 77
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=93.87 E-value=1.7 Score=46.33 Aligned_cols=42 Identities=14% Similarity=0.230 Sum_probs=28.9
Q ss_pred cCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004210 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++...... .. .+++++-+|.| +-.+++
T Consensus 188 ~~~p-V~v~NDanaaalaE~~~g~----~~-~~~v~l~~GtG-iG~giv 229 (380)
T 2hoe_A 188 YGIE-VWVENDADMGAVGEKWYTK----RD-DSFAWILTGKG-IGAGII 229 (380)
T ss_dssp HCSE-EEEEEHHHHHHHHHHHHTT----CC-SCEEEEEESSS-CEEEEE
T ss_pred hCCC-EEEechHHHHHHHHHHhCC----CC-CcEEEEEeCCc-eEEEEE
Confidence 4775 6899999999988654332 12 67888888887 334544
No 78
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=93.59 E-value=1.4 Score=47.69 Aligned_cols=44 Identities=20% Similarity=0.256 Sum_probs=29.8
Q ss_pred cCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004210 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++....... ....+++++-+|.| +-.+++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~---~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHS---QDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCC---CCCCcEEEEEECCc-EEEEEE
Confidence 4776 58999999999886543221 23456888888887 445554
No 79
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=93.57 E-value=7.8 Score=43.24 Aligned_cols=60 Identities=17% Similarity=0.106 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhc---CCCCCCcCC---hhhHHHhHHH
Q 004210 311 LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF---NREPGRTIN---ASECVARGCA 375 (768)
Q Consensus 311 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f---g~~v~~~~n---~~eava~Gaa 375 (768)
+++.+...+.++++..+ ++.|+|+||.+....+++.+.+.+ |.++..+.. .|.++..|.+
T Consensus 232 ~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~~~~~~Dngamia~~ 297 (540)
T 3en9_A 232 AFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWL 297 (540)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCCHHHHSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCHHHHHHH
Confidence 34444455666666655 467999999999999999999876 434433321 3455555554
No 80
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=93.55 E-value=7 Score=40.64 Aligned_cols=44 Identities=16% Similarity=0.078 Sum_probs=29.6
Q ss_pred cCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004210 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++....... ....+++++-+|.| +-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~---~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQG---KGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCC---CCCCcEEEEEECCC-EEEEEE
Confidence 4776 68999999999876543221 23456888888888 445554
No 81
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=93.46 E-value=2.4 Score=45.57 Aligned_cols=44 Identities=23% Similarity=0.336 Sum_probs=29.7
Q ss_pred cCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004210 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++..+.... ....+++++-+|.| +-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~---~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGAS---RGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCC---CCCCcEEEEEECCc-EEEEEE
Confidence 4776 68999999999876543221 23456888888888 445554
No 82
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=93.02 E-value=0.24 Score=55.19 Aligned_cols=75 Identities=15% Similarity=0.179 Sum_probs=46.6
Q ss_pred HHHHHHHHcCCcceEeccchHHHHHHh-hhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhh
Q 004210 156 AYLDAATIAGLKPLRLMHDCTATALGY-GIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRD 234 (768)
Q Consensus 156 ~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~ 234 (768)
.+..+-+..|+++ .+|+...=|.+.| |.... ++. ....+|+|+|||+|.+++.+ ++.+. . ....++|.-.
T Consensus 101 fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~-~~~--~~~~lviDIGGGStEl~~~~--~~~~~--~-~~Sl~lG~vr 171 (513)
T 1u6z_A 101 FLKRAEKVIPYPI-EIISGNEEARLIFMGVEHT-QPE--KGRKLVIDIGGGSTELVIGE--NFEPI--L-VESRRMGCVS 171 (513)
T ss_dssp HHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHH-SCC--CSCEEEEEECSSCEEEEEEE--TTEEE--E-EEEESCCHHH
T ss_pred HHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhh-ccC--CCCEEEEEECCCcEEEEEEe--CCeee--E-EEEEeccHHH
Confidence 3444445569887 5666555555544 43322 221 22699999999999999874 44442 2 2246799988
Q ss_pred HHHHH
Q 004210 235 FDEVL 239 (768)
Q Consensus 235 ~d~~l 239 (768)
+.+.+
T Consensus 172 lte~f 176 (513)
T 1u6z_A 172 FAQLY 176 (513)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87665
No 83
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=92.64 E-value=0.92 Score=44.21 Aligned_cols=45 Identities=20% Similarity=0.252 Sum_probs=40.0
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhhc
Q 004210 682 HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCIM 741 (768)
Q Consensus 682 ~~~~~ee~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i~ 741 (768)
..+++++++++.+.|+++..||+.. ...+++.+.++|++.|++|.
T Consensus 167 ~~l~~~~k~~i~~~l~~~~~~L~~~---------------~~~~i~~~~~~L~~~~~~i~ 211 (219)
T 4e81_A 167 DKLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQELAQVSQKLM 211 (219)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHHHHHHHHHHTHHHH
T ss_pred hhCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHHHHHHHH
Confidence 3479999999999999999999752 36899999999999999987
No 84
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=92.06 E-value=0.53 Score=41.14 Aligned_cols=70 Identities=16% Similarity=0.313 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh----CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHH
Q 004210 660 ARAQATGALLKCAMDYRKVVEA----HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDL 735 (768)
Q Consensus 660 ~rp~a~~~l~~~l~~~~~~~~~----~~~~~ee~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~ 735 (768)
.+-++...+.+.|..+++.+.. ..+++++++.|.+.|+++..||+.. + .-...+|+.+.+.|++
T Consensus 15 e~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~---~---------~ad~e~ik~k~~eL~~ 82 (120)
T 2p32_A 15 VPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSN---Q---------TAEKEEFEHQQKDLEG 82 (120)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHH---T---------TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcC---C---------cCCHHHHHHHHHHHHH
Confidence 3445556666666667666632 2389999999999999999999741 1 1125789999999999
Q ss_pred Hhhhhc
Q 004210 736 TCKCIM 741 (768)
Q Consensus 736 ~~~~i~ 741 (768)
.+.+|.
T Consensus 83 ~~~~i~ 88 (120)
T 2p32_A 83 LANPII 88 (120)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999998
No 85
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=91.93 E-value=2.5 Score=43.04 Aligned_cols=68 Identities=10% Similarity=-0.105 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCCh--HHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhhH
Q 004210 307 LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRI--PAISRMLNSLFNREPGRTINASECVARGCALQCAM 380 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sri--p~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~~ 380 (768)
.+..++++....+-..+ ...+- .+...|+|.||.++. +.+++.+++.. .++ ..+..+...||+.++..
T Consensus 211 ~A~~i~~~~~~~La~~i-~~~~~-~~p~~vvlgGGv~~~~~~~l~~~l~~~~-~~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-VLRYN-RPDLPLHFIGSVAFHYREVLSSVIKKRG-LTL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-TGGGC-CTTSCEEEESHHHHHTHHHHHHHHHHTT-CCE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hcccC-CCCceEEEECchHHhhHHHHHHHHHHcC-Cee---cccCcCHHHHHHHHHHh
Confidence 34455555555555555 22221 156789999998776 66777666543 122 23557889999988854
No 86
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=90.90 E-value=0.19 Score=55.58 Aligned_cols=72 Identities=15% Similarity=0.005 Sum_probs=52.0
Q ss_pred HHHHHHHHHH--HHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhh-cCCCCCCcCChhhHHHhHHHHHhhHh
Q 004210 305 EKLSSSLLER--MRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSL-FNREPGRTINASECVARGCALQCAML 381 (768)
Q Consensus 305 e~~~~~~~~~--i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~-fg~~v~~~~n~~eava~Gaa~~a~~l 381 (768)
..++..+++. +.-.++.+++... ..+.|.++||+++.|.+.+.+.+. ||.++.... ..|+.|+|||+.|+.-
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~-~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRPDCAVYTAN-AHNDVSFGALRLIDPG 436 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHSTTSEEEEES-SCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcC-CCchHHHHHHHHhCcc
Confidence 3444445543 4444455555432 126899999999999999999999 998886664 4568899999999754
No 87
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=89.33 E-value=4.3 Score=40.30 Aligned_cols=21 Identities=24% Similarity=0.425 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
-.+.||+|+|+++.++++.+.
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 479999999999999997654
No 88
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=89.17 E-value=2.7 Score=41.16 Aligned_cols=45 Identities=13% Similarity=0.108 Sum_probs=38.8
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhhc
Q 004210 682 HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCIM 741 (768)
Q Consensus 682 ~~~~~ee~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i~ 741 (768)
..+++++++.+.+.|++++.||.. + ...+++.+.++|++.+.+|.
T Consensus 164 ~~~~~~~k~~i~~~l~~~~~wl~~----~-----------d~~~~~~~~~~L~~~~~~i~ 208 (227)
T 1u00_A 164 ALLSAAERQVIDDAAAHLSEVAQG----D-----------DVDAIEQAIKNVDKQTQDFA 208 (227)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHTTS----S-----------CHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhc----C-----------CHHHHHHHHHHHHHHHHHHH
Confidence 347999999999999999999962 1 25889999999999999887
No 89
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=88.67 E-value=0.57 Score=40.41 Aligned_cols=64 Identities=20% Similarity=0.435 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHH--h--CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhhc
Q 004210 666 GALLKCAMDYRKVVE--A--HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCIM 741 (768)
Q Consensus 666 ~~l~~~l~~~~~~~~--~--~~~~~ee~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i~ 741 (768)
..+.+.|..+++.+. . ..++++++..|...|+++..||+.... -...+|+.+.+.|++.+.+|.
T Consensus 7 N~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~------------ad~~~i~~~~~~L~~~~~~i~ 74 (113)
T 1ud0_A 7 HMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQT------------AEKEEFEHQQKELEKVCNPII 74 (113)
T ss_dssp HHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCc------------cCHHHHHHHHHHHHHHHHHHH
Confidence 344455555555552 1 348999999999999999999974211 123789999999999999998
No 90
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=88.47 E-value=25 Score=36.25 Aligned_cols=49 Identities=20% Similarity=0.257 Sum_probs=30.8
Q ss_pred HcCCcceEeccchHHHHHHhhhccc-C---CC---CCCCcEEEEEEeCCceEEEEEE
Q 004210 163 IAGLKPLRLMHDCTATALGYGIYKT-D---FS---NVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 163 ~AGl~~~~li~Ep~Aaal~y~~~~~-~---~~---~~~~~~vlv~D~GggT~dvsv~ 212 (768)
..|++.+.+.|+..|+|++-..... + +. .....+++++-+|-|- -.+++
T Consensus 100 ~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGi-G~giv 155 (332)
T 1sz2_A 100 NLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGL-GVAHL 155 (332)
T ss_dssp HHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSE-EEEEE
T ss_pred HhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccc-eEEEE
Confidence 3588767999999999987644310 0 00 1234568888888883 34443
No 91
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=87.94 E-value=0.78 Score=48.11 Aligned_cols=80 Identities=18% Similarity=0.286 Sum_probs=48.0
Q ss_pred HHHHHHHHHcCCcceEeccchHHHHHHh-hhcccCCCC-CCCcEEEEEEeCCceEEEEEEEe--eC--CeEEEEEEeCCC
Q 004210 155 RAYLDAATIAGLKPLRLMHDCTATALGY-GIYKTDFSN-VGPTYVVFVDIGHCDTQVCVASY--EN--GHMKILSHAFDE 228 (768)
Q Consensus 155 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~-~~~~~vlv~D~GggT~dvsv~~~--~~--~~~~vl~~~~~~ 228 (768)
..+..+-+..|+++ .+|+...=|.+.| +... .++. .....++|+|+|||||+++++.- .. +.+ .. ....
T Consensus 106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~-~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~~-~~Sl 180 (343)
T 3cer_A 106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATS-VVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--QG-AFSM 180 (343)
T ss_dssp HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHS-SCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--SE-EEEE
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHh-hCccccccCCEEEEEeCCCceEEEEeecCccCccccc--ce-eEEE
Confidence 34555555679987 6666555555555 3322 2221 12356999999999999999753 11 111 11 2245
Q ss_pred CCchhhHHHHH
Q 004210 229 SLGGRDFDEVL 239 (768)
Q Consensus 229 ~lGG~~~d~~l 239 (768)
++|+..+.+.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 79998887765
No 92
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=87.72 E-value=26 Score=35.57 Aligned_cols=64 Identities=13% Similarity=0.004 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCC--hHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhh
Q 004210 307 LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSR--IPAISRMLNSLFNREPGRTINASECVARGCALQCA 379 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr--ip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~ 379 (768)
.+..++++....+-..+...-. . +...|+|.||.+. .|.+.+.+++.+- -|+.+.++||+++|.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i~-------~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRLV-------APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHCC-------CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhcc-------CCCCCHHHHHHHHHh
Confidence 3445555555555555544321 2 5677999998764 4566666665431 145678999998874
No 93
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=86.64 E-value=0.43 Score=39.98 Aligned_cols=22 Identities=27% Similarity=0.397 Sum_probs=19.9
Q ss_pred CeEEEEEcCccceEEEEEEcCC
Q 004210 1 MSVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 1 m~viGID~Gtt~s~va~~~~~~ 22 (768)
|.++|||+|+..+.||+.++.+
T Consensus 1 mriLglD~G~kriGvAvsd~~~ 22 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEGV 22 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSCC
T ss_pred CcEEEEEeCCCEEEEEEEeCCC
Confidence 7899999999999999988764
No 94
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=83.27 E-value=4.2 Score=41.64 Aligned_cols=51 Identities=16% Similarity=0.255 Sum_probs=32.9
Q ss_pred HHHHHHHHHHcCCcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004210 154 RRAYLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 154 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
++.+.+. .|++ +.+.|+..|+|++-...... ...++++++-+|-| .-.+++
T Consensus 90 ~~~l~~~---~~~p-V~v~NDanaaalaE~~~G~~---~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 90 LQTVXNE---MXIP-VGFSTDVNAAALGEFLFGEA---XGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HHHHHHH---HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHH---hCCC-EEEechhHHHHHHHHHhCCC---CCCCcEEEEEECCc-eEEEEE
Confidence 4444443 3776 69999999999986554321 23466888888876 444444
No 95
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=83.06 E-value=3.9 Score=47.02 Aligned_cols=68 Identities=19% Similarity=0.132 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHHh---CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhh
Q 004210 663 QATGALLKCAMDYRKVVEA---HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKC 739 (768)
Q Consensus 663 ~a~~~l~~~l~~~~~~~~~---~~~~~ee~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~ 739 (768)
++...+.+.+...+..+.. ..+++++++++.+.|++++.||.+.-. --+..+++.|+++|++.+++
T Consensus 551 ~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~-----------~~~~~~~~~~~~~l~~~~~~ 619 (675)
T 3d2f_A 551 DRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGF-----------DSIKAKYIAKYEELASLGNI 619 (675)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGG-----------GCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCc-----------hhhHHHHHHHHHHHHHHHHH
Confidence 3444445555555555521 238999999999999999999964110 11357788888888888877
Q ss_pred hc
Q 004210 740 IM 741 (768)
Q Consensus 740 i~ 741 (768)
|.
T Consensus 620 i~ 621 (675)
T 3d2f_A 620 IR 621 (675)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 96
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=82.91 E-value=14 Score=40.38 Aligned_cols=58 Identities=12% Similarity=0.015 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHcCCc--ceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEee
Q 004210 151 DVQRRAYLDAATIAGLK--PLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYE 215 (768)
Q Consensus 151 ~~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~ 215 (768)
..-.+.+.+|.+.-|++ ++.++|+.+|++++.++.. +..++-+=+|-|+=-+.+....
T Consensus 185 ~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~-------~~~~iglIlGTG~N~~y~e~~~ 244 (485)
T 3o8m_A 185 HDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-------PQTKMGIIIGTGVNGAYYDVVS 244 (485)
T ss_dssp SBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-------TTEEEEEEESSSEEEEEEEEGG
T ss_pred ccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC-------CCcEEEEEEecCcceEEEeecc
Confidence 45577888999888886 4789999999999877642 3456666678887666666553
No 97
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=82.78 E-value=7 Score=44.33 Aligned_cols=45 Identities=20% Similarity=0.252 Sum_probs=39.3
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhhc
Q 004210 682 HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCIM 741 (768)
Q Consensus 682 ~~~~~ee~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i~ 741 (768)
..+++++++.+.+.+++++.||+.. ...+++.+.++|++.|.++.
T Consensus 555 ~~~~~~~~~~~~~~~~~~~~~l~~~---------------~~~~~~~~~~~l~~~~~~~~ 599 (605)
T 4b9q_A 555 DKLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQELAQVSQKLM 599 (605)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHHHHHHHHHHTHHHH
T ss_pred hhCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHHHHHHHH
Confidence 3479999999999999999999741 15899999999999999987
No 98
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=82.05 E-value=4.6 Score=45.85 Aligned_cols=45 Identities=20% Similarity=0.256 Sum_probs=39.1
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhhc
Q 004210 682 HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCIM 741 (768)
Q Consensus 682 ~~~~~ee~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i~ 741 (768)
..+++++++.+.+.+++++.||+. + ...+++.+.++|++.+.+|.
T Consensus 555 ~~~~~~~~~~i~~~~~~~~~~l~~----~-----------~~~~~~~~~~~l~~~~~~~~ 599 (605)
T 2kho_A 555 DKLPADDKTAIESALTALETALKG----E-----------DKAAIEAKMQELAQVSQKLM 599 (605)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHTTS----S-----------CHHHHHHHHHHHHTTCHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhc----C-----------CHHHHHHHHHHHHHHHHHHH
Confidence 347999999999999999999973 1 46899999999999998886
No 99
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=81.97 E-value=1.9 Score=47.87 Aligned_cols=74 Identities=15% Similarity=0.172 Sum_probs=45.2
Q ss_pred HHHHHHHHHHcCCcceEeccchHHHHHHh-hhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCch
Q 004210 154 RRAYLDAATIAGLKPLRLMHDCTATALGY-GIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGG 232 (768)
Q Consensus 154 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG 232 (768)
...+..+-+..|+++ .+|+...=|.+.| |.... ++ ....+|+|+|||+|.++++. ++.+. .....++|.
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~-~~---~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~lG~ 172 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISG-FY---QPDGIAGDLGGGSLELIDIK--DKSCG---EGITLPLGG 172 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHH-SS---SCEEEEEEECSSCEEEEEEE--TTEEC---CCEEESCCH
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhc-CC---CCCeEEEEeCCCceEEEEee--CCeee---eEEEecceE
Confidence 345555556679997 5665554444444 44322 22 12459999999999999986 44331 122457888
Q ss_pred hhHHH
Q 004210 233 RDFDE 237 (768)
Q Consensus 233 ~~~d~ 237 (768)
-.+.+
T Consensus 173 vrl~e 177 (508)
T 3hi0_A 173 LRLSE 177 (508)
T ss_dssp HHHHH
T ss_pred Eehhh
Confidence 77765
No 100
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=80.93 E-value=5.7 Score=43.17 Aligned_cols=56 Identities=11% Similarity=-0.076 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHcCCc--ceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEe
Q 004210 152 VQRRAYLDAATIAGLK--PLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASY 214 (768)
Q Consensus 152 ~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~ 214 (768)
.=++.+.++...-|++ ++.++|+..|++++-.+.. ..+++.+=+|-|+=-..+...
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~-------~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD-------AXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC-------TTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC-------CccEEEEEECcEEEEEEEECC
Confidence 4467777877666665 5899999999999876622 356777778888666666554
No 101
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=80.44 E-value=0.88 Score=41.43 Aligned_cols=22 Identities=23% Similarity=0.549 Sum_probs=19.5
Q ss_pred CeEEEEEcCccceEEEEEEcCC
Q 004210 1 MSVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 1 m~viGID~Gtt~s~va~~~~~~ 22 (768)
|.++|||+|+..|++|+.++.+
T Consensus 3 mriLGiDpG~~riGvAv~d~~g 24 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEMG 24 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTTS
T ss_pred CEEEEEEccCCEEEEEEEECCC
Confidence 6799999999999999988654
No 102
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=79.12 E-value=2.1 Score=45.04 Aligned_cols=48 Identities=10% Similarity=0.142 Sum_probs=28.4
Q ss_pred CCcceEeccchHHHHHHhhhccc---CCCCCCCcEEEEEEeCCceEEEEEEE
Q 004210 165 GLKPLRLMHDCTATALGYGIYKT---DFSNVGPTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 165 Gl~~~~li~Ep~Aaal~y~~~~~---~~~~~~~~~vlv~D~GggT~dvsv~~ 213 (768)
|+. +++|+...=|.+.|.--.. .+....+..++|+|+|||+|.+++..
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 444 4666655555444421111 11112335699999999999999873
No 103
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=75.80 E-value=7.1 Score=45.40 Aligned_cols=64 Identities=16% Similarity=0.161 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhc---CCCCCCcCC---hhhHHHhHHHHHhhHh
Q 004210 313 ERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF---NREPGRTIN---ASECVARGCALQCAML 381 (768)
Q Consensus 313 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f---g~~v~~~~n---~~eava~Gaa~~a~~l 381 (768)
+-+...+.++.++.| ++.|+|.||......+++.|.+.+ |.++..+.. -|..+|+|+|++|+..
T Consensus 691 ~~L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 691 RAFAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 334455556666555 567999999999999999999887 445544322 3999999999888764
No 104
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=71.44 E-value=6.8 Score=44.43 Aligned_cols=65 Identities=11% Similarity=0.030 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhc-CCCCCC---cCChhhHHHhHHHHHhhH
Q 004210 311 LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF-NREPGR---TINASECVARGCALQCAM 380 (768)
Q Consensus 311 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f-g~~v~~---~~n~~eava~Gaa~~a~~ 380 (768)
+++.+...+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++.. ..-.|.++|+|.|++|+.
T Consensus 583 la~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 583 LAQGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 33444444555555544 568999999999999999999988 544322 223499999999998864
No 105
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=70.58 E-value=81 Score=30.64 Aligned_cols=43 Identities=5% Similarity=0.060 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHH
Q 004210 691 AVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALD 734 (768)
Q Consensus 691 ~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~ 734 (768)
.+...++++..|+.++...-.......|+- .+..+..+.+.+.
T Consensus 133 qF~~~a~~~~~Wl~~~e~~l~~~~~~~d~e-~v~~ll~~h~~~~ 175 (250)
T 1quu_A 133 EFAKRAAPFNNWMEGAMEDLQDMFIVHSIE-EIQSLITAHEQFK 175 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCCCCCCSTT-THHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHhccccccCCHH-HHHHHHHHHHHHH
Confidence 445788899999999886544433323322 4544444444443
No 106
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=70.56 E-value=4 Score=37.34 Aligned_cols=19 Identities=16% Similarity=0.347 Sum_probs=17.8
Q ss_pred CeEEEEEcCccceEEEEEE
Q 004210 1 MSVVGFDIGNENCVIAAVK 19 (768)
Q Consensus 1 m~viGID~Gtt~s~va~~~ 19 (768)
|-|+|||-|++++..+++.
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 8899999999999999986
No 107
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=68.52 E-value=3.6 Score=36.67 Aligned_cols=21 Identities=19% Similarity=0.360 Sum_probs=19.0
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.++|||+|+..+.||+.++.+
T Consensus 4 ~iLglD~G~kriGvAvsd~~~ 24 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRIT 24 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTT
T ss_pred eEEEEEeCCCEEEEEEEcCCC
Confidence 489999999999999998865
No 108
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=68.48 E-value=11 Score=39.30 Aligned_cols=71 Identities=17% Similarity=0.131 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcC-CCCC----CcCChhhHHHhHHHHHhhH
Q 004210 307 LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFN-REPG----RTINASECVARGCALQCAM 380 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg-~~v~----~~~n~~eava~Gaa~~a~~ 380 (768)
+..-+..-+...|-+.++... ..++.|+++||+++.|.+.++|++.++ ..+. ..+++|.-=|..-|++|..
T Consensus 261 v~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 261 IQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 344444444455555555432 136789999999999999999999985 4331 1223443334445666654
No 109
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=66.90 E-value=7.1 Score=42.39 Aligned_cols=20 Identities=20% Similarity=0.290 Sum_probs=17.2
Q ss_pred CcEEEEEEeCCceEEEEEEE
Q 004210 194 PTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 194 ~~~vlv~D~GggT~dvsv~~ 213 (768)
...++|+|+|||+|.++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 35689999999999999874
No 110
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=65.96 E-value=30 Score=37.46 Aligned_cols=58 Identities=10% Similarity=0.074 Sum_probs=42.2
Q ss_pred CHHHHHHHHHHHHHcCCc--ceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEe
Q 004210 150 TDVQRRAYLDAATIAGLK--PLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASY 214 (768)
Q Consensus 150 ~~~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~ 214 (768)
...=++.+.+|...-|++ ++.++|+.+|++++-++.. +..++-+=+|-|+=-..+...
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~-------~~~~iglIlGTG~na~yve~~ 230 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED-------PKCAVGLIVGTGTNVAYIEDS 230 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEET
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC-------CCcEEEEEEeCCcceEEEEcC
Confidence 455678888888777876 3599999999999876642 346666678888666555553
No 111
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=65.55 E-value=11 Score=39.35 Aligned_cols=69 Identities=16% Similarity=0.126 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcC-CCC------CCcCChhhHHHhHHHHHh
Q 004210 306 KLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFN-REP------GRTINASECVARGCALQC 378 (768)
Q Consensus 306 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg-~~v------~~~~n~~eava~Gaa~~a 378 (768)
.+..-+..-+...|-+.+.... ..+.|+++||+++.|.+.++|++.++ .++ ..+.+.-||+|. |++|
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~LA 340 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWLA 340 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHHH
Confidence 4445555555556666665542 35689999999999999999999994 233 233455566554 5565
Q ss_pred hH
Q 004210 379 AM 380 (768)
Q Consensus 379 ~~ 380 (768)
..
T Consensus 341 ~~ 342 (370)
T 3cqy_A 341 MR 342 (370)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 112
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=65.52 E-value=54 Score=34.27 Aligned_cols=44 Identities=16% Similarity=0.123 Sum_probs=30.1
Q ss_pred cCCcceEeccchHHHHHHhhhcc-------------cCCCCCCCcEEEEEEeCCceEEEEEE
Q 004210 164 AGLKPLRLMHDCTATALGYGIYK-------------TDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~-------------~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++-.... .. ....+++++-+|.| +-.+++
T Consensus 108 ~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~---~~~~~~v~l~lGtG-IG~giv 164 (366)
T 3mcp_A 108 FGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGST---KRYKNLLGVTLGTG-FGAGVV 164 (366)
T ss_dssp HCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCC---CCCCEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhhHHHHHHHHhCCCccccccccccccc---CCCCcEEEEEECCc-ceEEEE
Confidence 4887 689999999998754432 11 23567888888876 445554
No 113
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=65.29 E-value=8.6 Score=44.52 Aligned_cols=65 Identities=15% Similarity=0.020 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhc---CCCCCCc---CChhhHHHhHHHHHhhHhc
Q 004210 313 ERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF---NREPGRT---INASECVARGCALQCAMLS 382 (768)
Q Consensus 313 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f---g~~v~~~---~n~~eava~Gaa~~a~~ls 382 (768)
+.+...+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++..+ .-.|.++|+|.|++|+...
T Consensus 679 ~~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 679 NFTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HHHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 333344445555544 567999999999999999999887 4444322 2248999999999887543
No 114
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=64.68 E-value=4.6 Score=37.19 Aligned_cols=22 Identities=32% Similarity=0.415 Sum_probs=19.1
Q ss_pred CeEEEEEcCccceEEEEEEcCC
Q 004210 1 MSVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 1 m~viGID~Gtt~s~va~~~~~~ 22 (768)
|-|+|||-|++.+..++++..+
T Consensus 1 MrILGIDPGl~~tG~gvi~~~g 22 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAVEG 22 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEECS
T ss_pred CEEEEEccccCceEEEEEEecC
Confidence 8899999999999999976443
No 115
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=64.67 E-value=1.2e+02 Score=30.24 Aligned_cols=97 Identities=13% Similarity=0.206 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHhh--hhhhHHHHHHHHhhHHHHHHHHHHHHhhH---hh---ccCCHHHHHHHHHHHHHHHHHHhhcCC
Q 004210 559 ELSEAVEKEHQLVQ--QDLKMERTKDRKNALESYVYEMRDKISNI---YR---SFATESEREGISRNLRDTEEWLYEDGD 630 (768)
Q Consensus 559 e~~~~~~~~~~~~~--~D~~~~~~~~akN~LEs~iy~~r~~l~~~---~~---~~~t~~e~~~l~~~l~~~~~WL~~~g~ 630 (768)
+++.++.++.-+.. ........++.++.|..|.-++|.++... +. ...+++=|+.+...++++..-|.--.
T Consensus 45 ~le~lr~~L~Py~~el~~~~~~~~eelr~kL~p~~~el~~~l~~~~eeLr~~L~p~~eelr~kl~~~veelk~~L~Py~- 123 (273)
T 3s84_A 45 NLRELQQRLEPYADQLRTQVNTQAEQLRRQLTPYAQRMERVLRENADSLQASLRPHADELKAKIDQNVEELKGRLTPYA- 123 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHhHH-
Confidence 44555554443322 22344455677777777777777777532 11 11123334444444444444332110
Q ss_pred CccHHHHHHHHHHHHHhHhHHHHhhH
Q 004210 631 DESENVYAERLEDLKKLVDPIEGRYK 656 (768)
Q Consensus 631 ~a~~~~~~~kl~~L~~~~~pi~~R~~ 656 (768)
+.-.+.+.+++.+|+....|....+.
T Consensus 124 eelr~k~~~~leeLr~~l~P~ae~~~ 149 (273)
T 3s84_A 124 DEFKVKIDQTVEELRRSLAPYAQDTQ 149 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCSSCH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 11123344555666666666544433
No 116
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=64.28 E-value=56 Score=35.07 Aligned_cols=58 Identities=14% Similarity=0.147 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHHHcC---CcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEe
Q 004210 150 TDVQRRAYLDAATIAG---LKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASY 214 (768)
Q Consensus 150 ~~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~ 214 (768)
...-.+.+.+|...-| ++++.++|+.+|+.++.++.. +...+-+=+|-||=-+.+-+.
T Consensus 159 G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~-------~~~~iglIlGTGtNa~y~e~~ 219 (445)
T 3hm8_A 159 GQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED-------PRCEIGLIVGTGTNACYMEEL 219 (445)
T ss_dssp TSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEEG
T ss_pred CCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC-------CCceEEEEEeCCceEEEEEec
Confidence 3445678888887653 568999999999999876532 345555557888665555444
No 117
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=61.48 E-value=16 Score=40.77 Aligned_cols=66 Identities=14% Similarity=0.013 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC-CCCCc-CChhhHHHhHHHHHhhHhcC
Q 004210 313 ERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR-EPGRT-INASECVARGCALQCAMLSP 383 (768)
Q Consensus 313 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~-~v~~~-~n~~eava~Gaa~~a~~ls~ 383 (768)
+-+...+.++.+..+ ++.|.|.||.+....+++.|.+..+. .+..+ .-.|.++++|+|+++....+
T Consensus 293 ~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g 360 (576)
T 3ven_A 293 RAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELG 360 (576)
T ss_dssp HHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcC
Confidence 334445555555554 67899999999999999999877653 33222 34489999999999876644
No 118
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=58.70 E-value=5.7 Score=43.95 Aligned_cols=21 Identities=5% Similarity=0.063 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.++|||+|||++++++++..+
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g 25 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEEL 25 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTC
T ss_pred EEEEEEeCCcceEEEEECCCC
Confidence 489999999999999998655
No 119
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=58.62 E-value=1.9e+02 Score=30.61 Aligned_cols=45 Identities=9% Similarity=0.138 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCC-ChHHHHHHHHhhc
Q 004210 308 SSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLF 356 (768)
Q Consensus 308 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~f 356 (768)
++-+..++.+.|-...... ..+|.|+++||-+ +.+.|++.+.+.+
T Consensus 310 ~d~f~yri~k~IGa~aa~L----ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 310 IKTFVHRIARHIAGHAASL----HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTC----SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHh----CCCCEEEECccccccCHHHHHHHHhhH
Confidence 3344555555555544332 3699999999999 9999999998776
No 120
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=58.44 E-value=5.3 Score=44.17 Aligned_cols=21 Identities=19% Similarity=0.378 Sum_probs=18.6
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.++|||+|||++++++++..+
T Consensus 5 ~~lgIDiGtts~K~~l~d~~G 25 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDING 25 (504)
T ss_dssp EEEEEEECSSEEEEEEEETTS
T ss_pred EEEEEEecCCceEEEEEcCCC
Confidence 489999999999999998654
No 121
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=57.95 E-value=1.6e+02 Score=29.60 Aligned_cols=23 Identities=9% Similarity=-0.083 Sum_probs=17.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Q 004210 688 VRDAVIDECSKAEEWLREKVTQQ 710 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q 710 (768)
++..+...++++..|+.++...-
T Consensus 218 ~~~~f~~~~~e~~~Wl~ek~~~L 240 (326)
T 3kbt_A 218 DLHRYFYTGAEILGLIDEKHREL 240 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 45667778999999999987654
No 122
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=57.09 E-value=17 Score=43.31 Aligned_cols=58 Identities=14% Similarity=0.103 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHc-CC--cceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEe
Q 004210 150 TDVQRRAYLDAATIA-GL--KPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASY 214 (768)
Q Consensus 150 ~~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~ 214 (768)
...-.+.|.+|...- |+ +++.++|+.+|++++-++.. +..++-+=+|-|+=-..+...
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~-------~~~~iglIlGTG~na~y~e~~ 690 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE-------PTCEVGLIVGTGSNACYMEEM 690 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEET
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC-------CCcEEEEEEeCCeeEEEEEcC
Confidence 445567787887643 45 58999999999999876642 346666667888766555554
No 123
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=56.98 E-value=5.2 Score=44.51 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=18.2
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.+||||+|||++++++++..+
T Consensus 5 YvlgID~GTss~Ka~l~d~~G 25 (526)
T 3ezw_A 5 YIVALDQGTTSSRAVVMDHDA 25 (526)
T ss_dssp EEEEEEECSSEEEEEEECTTC
T ss_pred EEEEEEccccceeeeEEcCCC
Confidence 379999999999999987654
No 124
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=56.82 E-value=5.3 Score=44.05 Aligned_cols=21 Identities=14% Similarity=0.219 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.++|||+|||++++++++..+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g 23 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEG 23 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTS
T ss_pred EEEEEeeCCcceEEEEECCCC
Confidence 489999999999999997654
No 125
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=56.74 E-value=61 Score=35.74 Aligned_cols=34 Identities=9% Similarity=0.101 Sum_probs=28.3
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHcCCcceEec
Q 004210 139 SNCVIGVPCYLTDVQRRAYLDAATIAGLKPLRLM 172 (768)
Q Consensus 139 ~~~VitVP~~~~~~qr~~l~~Aa~~AGl~~~~li 172 (768)
..++.-+|..++...-.++.+++...|+++...|
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~i 164 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINVVAAI 164 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcEEEEE
Confidence 4455559999999999999999999999876644
No 126
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=56.12 E-value=51 Score=36.21 Aligned_cols=36 Identities=11% Similarity=0.101 Sum_probs=30.9
Q ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCcceEec
Q 004210 137 PISNCVIGVPCYLTDVQRRAYLDAATIAGLKPLRLM 172 (768)
Q Consensus 137 ~~~~~VitVP~~~~~~qr~~l~~Aa~~AGl~~~~li 172 (768)
+-..+++.||..++..+-.++.+++...|+++...|
T Consensus 127 ~~~~~i~~~~~~~df~~~a~~in~~~~~g~~i~~~i 162 (610)
T 2d0o_A 127 ADAPYILVVSSAFDFADIASVINASLRAGYQITGVI 162 (610)
T ss_dssp TTSEEEEEECTTSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCcEEEEECCcCCHHHHHHHHHHHHHCCCcEEEEE
Confidence 456799999999999999999999999999865544
No 127
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=55.85 E-value=6.7 Score=43.94 Aligned_cols=21 Identities=19% Similarity=0.412 Sum_probs=18.6
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.+||||+|||++++++++..+
T Consensus 6 ~~lgIDiGtts~ka~l~d~~G 26 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQG 26 (554)
T ss_dssp EEEEEEECSSEEEEEEEETTS
T ss_pred EEEEEEECcccEEEEEECCCC
Confidence 489999999999999998654
No 128
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=55.58 E-value=1e+02 Score=33.26 Aligned_cols=58 Identities=14% Similarity=0.069 Sum_probs=40.4
Q ss_pred CHHHHHHHHHHHHHcC---CcceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEe
Q 004210 150 TDVQRRAYLDAATIAG---LKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASY 214 (768)
Q Consensus 150 ~~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~ 214 (768)
+..-.+.+++|.+.-| ++++.++|+.+|..++.++.. +...+=+=+|-||=-+.+-+.
T Consensus 183 G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~-------~~~~iGlI~GTGtNa~Y~E~~ 243 (470)
T 3f9m_A 183 GNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED-------HQCEVGMIVGTGCNACYMEEM 243 (470)
T ss_dssp TSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC-------CCceEEEEEecCCceEEeeec
Confidence 4455788888988877 458899999999998876543 234444446888765554444
No 129
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=55.49 E-value=6.3 Score=43.68 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.++|||+|||++++++++..+
T Consensus 4 ~~lgIDiGtts~k~~l~d~~G 24 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMDHDA 24 (510)
T ss_dssp EEEEEEECSSEEEEEEECTTC
T ss_pred EEEEEEcCCcceEEEEECCCC
Confidence 589999999999999997654
No 130
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=55.48 E-value=64 Score=38.35 Aligned_cols=55 Identities=15% Similarity=0.102 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHcC-Cc--ceEeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEE
Q 004210 152 VQRRAYLDAATIAG-LK--PLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 152 ~qr~~l~~Aa~~AG-l~--~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 213 (768)
.-++.+.++...-| ++ ++.++|+..|++++-++.. ..+++.+=+|-|+=-.-+..
T Consensus 184 ~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~-------~~~~iglilGTGvngg~i~~ 241 (917)
T 1cza_N 184 DVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDD-------QHCEVGLIIGTGTNACYMEE 241 (917)
T ss_dssp BHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHC-------TTEEEEEEESSSEEEEEEEE
T ss_pred chHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccC-------CCcEEEEEEECCcceEEEec
Confidence 45677777776666 54 6899999999999876652 35667677788865555544
No 131
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=54.43 E-value=6.7 Score=43.39 Aligned_cols=21 Identities=29% Similarity=0.551 Sum_probs=18.6
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.++|||+|||++++++++..+
T Consensus 8 ~~lgIDiGtts~k~~l~d~~G 28 (508)
T 3ifr_A 8 QVIGLDIGTTSTIAILVRLPD 28 (508)
T ss_dssp EEEEEEECSSEEEEEEEETTT
T ss_pred EEEEEEecCcceEEEEECCCC
Confidence 489999999999999998655
No 132
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=54.10 E-value=6.8 Score=43.25 Aligned_cols=21 Identities=19% Similarity=0.311 Sum_probs=18.6
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.+||||+|||++++++++..+
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G 27 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKG 27 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTS
T ss_pred EEEEEEeCccceEEEEEcCCC
Confidence 489999999999999998654
No 133
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=53.53 E-value=87 Score=32.91 Aligned_cols=46 Identities=13% Similarity=0.184 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCC-ChHHHHHHHHhhcC
Q 004210 308 SSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLFN 357 (768)
Q Consensus 308 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~fg 357 (768)
++-+..++.+.|-......| ++|.|+++||-+ +.+.|++.|.+.++
T Consensus 303 ~d~f~yriak~Iga~aa~LG----~vDaIVfTGGIgEns~~vr~~I~~~l~ 349 (398)
T 4ijn_A 303 YDVYIHRLRKYIGAYMAVLG----RTDVISFTAGVGENVPPVRRDALAGLG 349 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHS----SCCEEEEEHHHHHHCHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCcEEEECCccccccHHHHHHHHHHHh
Confidence 33444555555544433322 689999999988 56889999987763
No 134
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=53.34 E-value=7.9 Score=42.81 Aligned_cols=21 Identities=19% Similarity=0.321 Sum_probs=18.6
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.++|||+|||++++++++..+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G 26 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRNG 26 (506)
T ss_dssp EEEEEEECSSEEEEEEEETTS
T ss_pred EEEEEEcCCCceEEEEECCCC
Confidence 489999999999999998654
No 135
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=53.22 E-value=7.2 Score=43.50 Aligned_cols=21 Identities=19% Similarity=0.374 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.++|||+|||.+++++++..+
T Consensus 11 ~~lgID~GTts~Ka~l~d~~G 31 (538)
T 4bc3_A 11 CCLGWDFSTQQVKVVAVDAEL 31 (538)
T ss_dssp EEEEEEECSSEEEEEEEETTC
T ss_pred EEEEEEEcCcCEEEEEECCCC
Confidence 489999999999999998654
No 136
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=52.83 E-value=7.3 Score=42.95 Aligned_cols=21 Identities=14% Similarity=0.200 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.++|||+|||++++++++..+
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g 24 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRES 24 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTC
T ss_pred EEEEEecCCchhEEEEECCCC
Confidence 589999999999999997644
No 137
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=52.70 E-value=7.1 Score=43.23 Aligned_cols=21 Identities=29% Similarity=0.498 Sum_probs=18.6
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.++|||+|||++++++++..+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G 26 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDG 26 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTS
T ss_pred EEEEEEeCCCceEEEEECCCC
Confidence 589999999999999997554
No 138
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=52.46 E-value=7.9 Score=42.89 Aligned_cols=21 Identities=24% Similarity=0.569 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEE-cCC
Q 004210 2 SVVGFDIGNENCVIAAVK-QGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~-~~~ 22 (768)
.++|||+|||++++++++ ..+
T Consensus 6 ~~lgIDiGtts~ka~l~d~~~G 27 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTDAETG 27 (515)
T ss_dssp EEEEEEECSSEEEEEEEETTTC
T ss_pred EEEEEEeccccEEEEEEECCCC
Confidence 489999999999999998 544
No 139
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=52.17 E-value=6.1 Score=43.42 Aligned_cols=21 Identities=14% Similarity=0.289 Sum_probs=18.0
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.++|||+|||++++++++..+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G 27 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDG 27 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTS
T ss_pred eEEEEEcCCCCeEEEEEECCC
Confidence 479999999999999998554
No 140
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=51.40 E-value=8.3 Score=43.37 Aligned_cols=21 Identities=24% Similarity=0.423 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEc-CC
Q 004210 2 SVVGFDIGNENCVIAAVKQ-GG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~-~~ 22 (768)
.+||||+|||++++++++. .+
T Consensus 6 ~~lgIDiGTts~Ka~l~d~~~G 27 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDLSNG 27 (572)
T ss_dssp EEEEEEECSSEEEEEEEETTTC
T ss_pred EEEEEecCCcceEEEEEECCCC
Confidence 5899999999999999985 44
No 141
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=51.14 E-value=18 Score=39.07 Aligned_cols=44 Identities=18% Similarity=0.308 Sum_probs=26.7
Q ss_pred ceEeccchHHHHHHh-----hhcccCCCCCCCcEEEEEEeCCceEEEEEEE
Q 004210 168 PLRLMHDCTATALGY-----GIYKTDFSNVGPTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 168 ~~~li~Ep~Aaal~y-----~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 213 (768)
.+++|+...=+.++| .+.. +.......+.++|||||++.++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~--l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGR--FKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTT--TC---CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhcc--ccCCCCCceEEEecCCCceEEEecc
Confidence 367777665554443 3221 1111235688999999999998764
No 142
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=51.10 E-value=6.1 Score=43.46 Aligned_cols=20 Identities=15% Similarity=0.290 Sum_probs=17.6
Q ss_pred eEEEEEcCccceEEEEEEcC
Q 004210 2 SVVGFDIGNENCVIAAVKQG 21 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~ 21 (768)
.++|||+|||++++++++..
T Consensus 5 ~~lgiDiGtts~k~~l~d~~ 24 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARYE 24 (489)
T ss_dssp EEEEEEECSSEEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEEec
Confidence 48999999999999998743
No 143
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=50.80 E-value=43 Score=25.79 Aligned_cols=46 Identities=17% Similarity=0.268 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHhhccCC
Q 004210 561 SEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIYRSFAT 607 (768)
Q Consensus 561 ~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~t 607 (768)
..+.++.+++..+|...++++....+.|+-|-.+|..|+. |..+++
T Consensus 26 ~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK-frSVl~ 71 (72)
T 3nmd_A 26 YALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDK-YRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhccCC
Confidence 3445667788899999999999999999999999998854 655543
No 144
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=50.77 E-value=75 Score=38.44 Aligned_cols=18 Identities=22% Similarity=0.366 Sum_probs=0.0
Q ss_pred HHhhHHHHHHHHHHHHhh
Q 004210 583 RKNALESYVYEMRDKISN 600 (768)
Q Consensus 583 akN~LEs~iy~~r~~l~~ 600 (768)
....||.-|-+++.+|++
T Consensus 922 ~~~~LE~kl~eLq~rL~~ 939 (1080)
T 2dfs_A 922 LHIGLENKIMQLQRKIDE 939 (1080)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 357788888888877753
No 145
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=50.04 E-value=8.7 Score=42.64 Aligned_cols=21 Identities=10% Similarity=0.164 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.+||||+|||++++++++..+
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G 47 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQ 47 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTS
T ss_pred eEEEEEeCCcceEEEEECCCC
Confidence 489999999999999998654
No 146
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=48.73 E-value=1.1e+02 Score=26.92 Aligned_cols=82 Identities=15% Similarity=0.176 Sum_probs=42.8
Q ss_pred cHHHHHHHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc
Q 004210 633 SENVYAERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVVEAHSLPSKVRDAVIDECSKAEEWLREKVTQQDS 712 (768)
Q Consensus 633 ~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~ee~~~v~~~~~~~~~Wl~~~~~~q~~ 712 (768)
+.+.+.+++..|......+..+..++..+ |..++ .+..|. ..+++...|++++...- .
T Consensus 13 ~a~~I~~r~~~l~~r~~~L~~~a~~R~~~------Le~s~-~l~~F~--------------~d~~el~~Wi~ek~~~~-~ 70 (149)
T 3f31_A 13 TAEDIQERRQQVLDRYHRFKELSTLRRQK------LEDSY-RFQFFQ--------------RDAEELEKWIQEKLQIA-S 70 (149)
T ss_dssp CTTHHHHHHHHHHHHTCSCHHHHHHHHHH------HHHHH-HHHHHH--------------HHHHHHHHHHHHHHHHT-T
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHH-HHHHHH--------------HHHHHHHHHHHHHHHHH-c
Confidence 44566677777766555555544443322 12222 123333 66777888888877642 2
Q ss_pred CCCCCCCcccHHHHHHHHHHHHHHh
Q 004210 713 LPKDADPILWSTEIKRKSEALDLTC 737 (768)
Q Consensus 713 ~~~~~dP~~~~~di~~k~~~l~~~~ 737 (768)
-+.+.||. .+.....|.+.++..+
T Consensus 71 ~~~~~d~~-~v~~~l~kH~afe~El 94 (149)
T 3f31_A 71 DENYKDPT-NLQGKLQKHQAFEAEV 94 (149)
T ss_dssp SCSSCSSS-CHHHHHHHHHHHHHHH
T ss_pred CcccCCHH-HHHHHHHHHHHHHHHH
Confidence 24455553 3444444555555443
No 147
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=48.38 E-value=10 Score=37.87 Aligned_cols=21 Identities=14% Similarity=0.227 Sum_probs=18.8
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
-+++||+|+|+++.++++.+.
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 489999999999999998765
No 148
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=48.27 E-value=8.9 Score=42.11 Aligned_cols=20 Identities=20% Similarity=0.569 Sum_probs=17.6
Q ss_pred EEEEEcCccceEEEEEEcCC
Q 004210 3 VVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 3 viGID~Gtt~s~va~~~~~~ 22 (768)
++|||+|||++++++++..+
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g 21 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQG 21 (484)
T ss_dssp EEEEEECSSEEEEEEECTTS
T ss_pred EEEEEecCcccEEEEECCCC
Confidence 69999999999999997544
No 149
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=47.99 E-value=14 Score=38.06 Aligned_cols=68 Identities=13% Similarity=0.027 Sum_probs=38.9
Q ss_pred cHHHHHHHHHHHHH----HHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCC-----C-cCChhhH
Q 004210 300 RREEFEKLSSSLLE----RMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPG-----R-TINASEC 369 (768)
Q Consensus 300 tr~~fe~~~~~~~~----~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~-----~-~~n~~ea 369 (768)
+.++.+++.+.+.+ .|.+-+.+++++.++ ..|+.+||+ +++-..+.+.++ +. . +.+.+-+
T Consensus 244 ~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~-----~~vv~aG~G---~~L~~~la~~~~--~~~~~~~i~~~~s~va 313 (334)
T 3cet_A 244 SEIDAENIAKNYYELWKELILENVENVAEKYGS-----KKVVITGLG---ENILKDALADFE--VISVAERYGKDVSLAT 313 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEESTT---HHHHHHHTTTSE--EEEHHHHHCHHHHHSH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CeEEEeCCc---HHHHHHHHhhCC--eeehhcccCccccccc
Confidence 55666666665444 444555555555433 379999987 466666554422 11 1 2235667
Q ss_pred HHhHHHHH
Q 004210 370 VARGCALQ 377 (768)
Q Consensus 370 va~Gaa~~ 377 (768)
-|+|+|+.
T Consensus 314 pA~avA~l 321 (334)
T 3cet_A 314 PSFAVAEL 321 (334)
T ss_dssp HHHHHHHH
T ss_pred CHHHHHHH
Confidence 78888854
No 150
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=45.99 E-value=10 Score=41.91 Aligned_cols=21 Identities=19% Similarity=0.333 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.++|||+|||++++++++..+
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G 23 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSG 23 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTS
T ss_pred EEEEEecCCcceEEEEECCCC
Confidence 479999999999999997654
No 151
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=44.12 E-value=23 Score=36.13 Aligned_cols=48 Identities=10% Similarity=0.061 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004210 308 SSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 308 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
.....+.+...++++|+++|+++++|+.|+..|+++++ -+.+.+.||.
T Consensus 213 ~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~ 260 (317)
T 1hnj_A 213 FKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGM 260 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 33455677888999999999999999999999998765 4568888874
No 152
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=44.05 E-value=3e+02 Score=29.45 Aligned_cols=126 Identities=10% Similarity=0.010 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhc---------CCC-ccHHHHHHHHHHHHHhHhHHHHhhHhHHH---HHHHHHHHHHHHHHHHHH
Q 004210 612 EGISRNLRDTEEWLYED---------GDD-ESENVYAERLEDLKKLVDPIEGRYKDEEA---RAQATGALLKCAMDYRKV 678 (768)
Q Consensus 612 ~~l~~~l~~~~~WL~~~---------g~~-a~~~~~~~kl~~L~~~~~pi~~R~~e~~~---rp~a~~~l~~~l~~~~~~ 678 (768)
+.-...++++..||.+- |.+ ++.+.+.+|.+.|+.-+.....++..... -+..+..+..........
T Consensus 5 ~~~~r~v~dl~~Wl~E~~~~L~S~d~GkDL~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a~~~~~~~~L~~~y~~L~~~ 84 (450)
T 3r6n_A 5 EFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLREKSAIYQLEEEYENLLKA 84 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred hhhhccHHHHHHHHHHHHHhcCccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q ss_pred HHhCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhh
Q 004210 679 VEAHSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCK 738 (768)
Q Consensus 679 ~~~~~~~~ee~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~ 738 (768)
+....---+.+..+...+.+...|++++...-....-.+++. .+.-+..|-+.|+..+.
T Consensus 85 a~~Rr~~Le~L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~-dv~~l~~khq~l~~EL~ 143 (450)
T 3r6n_A 85 SFERMDHLRQLQNIIQATSREIMWINDCEEEELLYDWSDKNT-NIAQKQEAFSIRMSQLE 143 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCC-CTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcChh-hHHHHHHHHHHHHHHHH
No 153
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=42.11 E-value=1.5e+02 Score=30.92 Aligned_cols=44 Identities=14% Similarity=0.140 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCC-ChHHHHHHHHhhc
Q 004210 309 SSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLF 356 (768)
Q Consensus 309 ~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~f 356 (768)
+-+..++.+.|-..... +. .+|.|+++||-+ ..+.|++.+.+.+
T Consensus 294 d~f~yri~k~IGa~aa~--L~--gvDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 294 EIFSHRVAKFVASYMIY--FN--KLDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp HHHHHHHHHHHHHHGGG--CS--SCCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH--hC--CCCEEEECCccccCcHHHHHHHHhhc
Confidence 34455555555444333 22 699999999988 7799999988765
No 154
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=41.87 E-value=1.7e+02 Score=27.78 Aligned_cols=25 Identities=16% Similarity=0.298 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhc
Q 004210 688 VRDAVIDECSKAEEWLREKVTQQDS 712 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q~~ 712 (768)
.+..+...+++...|++++...-..
T Consensus 121 ~l~~F~~~~~~~~~Wi~eke~~~~s 145 (224)
T 2iak_A 121 TLHNFVTRATNELIWLNEKEESEVA 145 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5556667888889999998876443
No 155
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=41.06 E-value=67 Score=34.74 Aligned_cols=52 Identities=17% Similarity=0.283 Sum_probs=33.9
Q ss_pred CCcEEEEEEeCCceEEEEEEEeeCC-----eEEEEEEeCCCC----CchhhHHHHHHHHHHHHH
Q 004210 193 GPTYVVFVDIGHCDTQVCVASYENG-----HMKILSHAFDES----LGGRDFDEVLSSYFAAQF 247 (768)
Q Consensus 193 ~~~~vlv~D~GggT~dvsv~~~~~~-----~~~vl~~~~~~~----lGG~~~d~~l~~~l~~~~ 247 (768)
+...+|.+|+||.++-|++|++.++ .+++....+..+ .| . ...|++|+.+.+
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~~l~~g-t--~~eLFd~IA~~i 135 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTG-T--AEMLFDYISECI 135 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHHHHSS-B--HHHHHHHHHHHH
T ss_pred cceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCChHhccC-C--HHHHHHHHHHHH
Confidence 4567999999999999999999864 355544443222 12 1 355666666543
No 156
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=40.74 E-value=1.5e+02 Score=24.40 Aligned_cols=85 Identities=6% Similarity=0.082 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHhhc-------C-CCccHHHHHHHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 004210 611 REGISRNLRDTEEWLYED-------G-DDESENVYAERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVVEAH 682 (768)
Q Consensus 611 ~~~l~~~l~~~~~WL~~~-------g-~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~ 682 (768)
...|...++++..||.+- . ...+.+.++..+++.+.+..-|..+... + ......+..++...
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~-------v---~~v~~~g~~L~~~~ 73 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSS-------V---GSVLQAGNQLMTQG 73 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHH-------H---HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-------H---HHHHHHHHHHHHhC
Confidence 456777888888888641 1 1234556666666666665555443222 1 12222333344222
Q ss_pred CCChhhHHHHHHHHHHHHHHHHH
Q 004210 683 SLPSKVRDAVIDECSKAEEWLRE 705 (768)
Q Consensus 683 ~~~~ee~~~v~~~~~~~~~Wl~~ 705 (768)
..+.++...|...++....-++.
T Consensus 74 ~~~~~~~~~i~~~l~~l~~rw~~ 96 (118)
T 3uul_A 74 TLSDEEEFEIQEQMTLLNARWEA 96 (118)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHH
Confidence 35566666666666665544443
No 157
>2y6x_A PSB27, photosystem II 11 KD protein; photosynthesis; 1.60A {Thermosynechococcus elongatus}
Probab=40.58 E-value=1.7e+02 Score=24.77 Aligned_cols=91 Identities=12% Similarity=0.115 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHhHhHHHHhhHhH--HHHHHHHHHHHHHHHHHHHHHH---hCCCCh
Q 004210 612 EGISRNLRDTEEWLYEDGDDESENVYAERLEDLKKLVDPIEGRYKDE--EARAQATGALLKCAMDYRKVVE---AHSLPS 686 (768)
Q Consensus 612 ~~l~~~l~~~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~--~~rp~a~~~l~~~l~~~~~~~~---~~~~~~ 686 (768)
+.-.+.++.+.+-|..+.++....+ -..++++.+.-+..||.-. -..-.....|+++|+.+..... ..-+++
T Consensus 14 ~dT~~Vv~~lr~~l~l~~d~~~~~~---a~~~ar~~ind~vsrYRr~~~v~g~~Sfttm~tAlNaLAGHY~s~g~~PlPe 90 (113)
T 2y6x_A 14 EDTLALISSLREAIALPENDPNKKA---AQAEARKKLNDFFALYRRDDSLRSLSSFMTMQTALNSLAGHYSSYPNRPLPE 90 (113)
T ss_dssp HHHHHHHHHHHHHHHSCTTCTTHHH---HHHHHHHHHHHHHHHHTTCHHHHTSHHHHHHHHHHHHHHHHHHHCTTSCCCH
T ss_pred HHHHHHHHHHHHHHcCCCCCccHHH---HHHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHHHHHHHhhcCCCCCCH
Confidence 4445566666666766555555544 4477777788888888743 4455677788888876655541 122999
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 004210 687 KVRDAVIDECSKAEEWLRE 705 (768)
Q Consensus 687 ee~~~v~~~~~~~~~Wl~~ 705 (768)
+-++.|...++.++.-|..
T Consensus 91 k~k~Rl~~el~~AE~al~R 109 (113)
T 2y6x_A 91 KLKARLEQEFKQVELALDR 109 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988765
No 158
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=39.71 E-value=2e+02 Score=30.02 Aligned_cols=46 Identities=20% Similarity=0.094 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCC-hHHHHHHHHhhcC
Q 004210 308 SSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSR-IPAISRMLNSLFN 357 (768)
Q Consensus 308 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr-ip~v~~~l~~~fg 357 (768)
++-+..++.+.|-......| .+|.|+++||-+. .+.|++.+.+.++
T Consensus 294 ~d~f~yri~k~Iga~aa~Lg----~vDaIVfTGGIgens~~vR~~i~~~l~ 340 (391)
T 3r9p_A 294 YSVFTHRLRKYIGAYLAVLG----HTDVISFTAGIGENDAAVRRDAVSGME 340 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHS----SCCEEEEEHHHHHHCHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHHHHH
Confidence 34455555555544443333 6899999999886 6999999987663
No 159
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=39.65 E-value=62 Score=35.22 Aligned_cols=31 Identities=10% Similarity=0.191 Sum_probs=24.4
Q ss_pred CCcEEEEEEeCCceEEEEEEEeeCC-eEEEEE
Q 004210 193 GPTYVVFVDIGHCDTQVCVASYENG-HMKILS 223 (768)
Q Consensus 193 ~~~~vlv~D~GggT~dvsv~~~~~~-~~~vl~ 223 (768)
+...+|.+|+||.++-++++.+.++ .+++..
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~ 109 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGNHDFDTTQ 109 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESSSCEEEEE
T ss_pred cceEEEEEEecCCeEEEEEEEECCCCceEEEE
Confidence 3467999999999999999999864 344443
No 160
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=39.23 E-value=62 Score=27.03 Aligned_cols=25 Identities=12% Similarity=0.048 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhc
Q 004210 688 VRDAVIDECSKAEEWLREKVTQQDS 712 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q~~ 712 (768)
++....+.+++...||.++......
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~ 27 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQE 27 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4667778888899999887665544
No 161
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=37.49 E-value=1.1e+02 Score=32.86 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=22.4
Q ss_pred CCcEEEEEEeCCceEEEEEEEeeCCe
Q 004210 193 GPTYVVFVDIGHCDTQVCVASYENGH 218 (768)
Q Consensus 193 ~~~~vlv~D~GggT~dvsv~~~~~~~ 218 (768)
+...++.+|+||.++-+.++...+..
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTE
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCe
Confidence 45678999999999999999988664
No 162
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=37.38 E-value=30 Score=35.28 Aligned_cols=46 Identities=17% Similarity=0.120 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004210 310 SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 310 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
-....+...++++|+++|+++++|+.|++.|+++++ -+.+.+.||.
T Consensus 217 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 262 (322)
T 1ub7_A 217 FAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGL 262 (322)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 345677788999999999999999999999988665 3467888874
No 163
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=36.65 E-value=32 Score=34.81 Aligned_cols=46 Identities=22% Similarity=0.283 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004210 310 SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 310 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
.....+...++++|+++|++++||+.|++.|+++++ -+.+.+.||.
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~ 252 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNI 252 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCC
Confidence 345567788999999999999999999999998765 3457788874
No 164
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=34.81 E-value=1.9e+02 Score=23.75 Aligned_cols=45 Identities=9% Similarity=0.200 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHhhc--------CCCccHHHHHHHHHHHHHhHhHHHHh
Q 004210 610 EREGISRNLRDTEEWLYED--------GDDESENVYAERLEDLKKLVDPIEGR 654 (768)
Q Consensus 610 e~~~l~~~l~~~~~WL~~~--------g~~a~~~~~~~kl~~L~~~~~pi~~R 654 (768)
+...|...++++..||.+- ....+.+.++..+.+.+.+..-|..+
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~ 55 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAH 55 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3466777888888888641 11234555555665555555544443
No 165
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=34.46 E-value=2.5e+02 Score=26.21 Aligned_cols=23 Identities=9% Similarity=-0.083 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Q 004210 688 VRDAVIDECSKAEEWLREKVTQQ 710 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q 710 (768)
++..+...++++..|+.++....
T Consensus 109 ~~~~F~~~~~e~~~Wl~ek~~~l 131 (218)
T 3edu_A 109 DLHRYFYTGAEILGLIDEKHREL 131 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 56677788999999999977654
No 166
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=33.99 E-value=3.6e+02 Score=26.78 Aligned_cols=47 Identities=17% Similarity=0.131 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHH
Q 004210 689 RDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLT 736 (768)
Q Consensus 689 ~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~ 736 (768)
+..+...+.+...|+.++...-...+.. +.+-.+..+..+.+.+...
T Consensus 112 l~~f~~~~~~l~~Wl~~~e~~l~~~~~g-~d~~~v~~l~~~~~~f~~e 158 (326)
T 3kbt_A 112 LFQLKRETDDLEQWISEKELVASSPEMG-QDFDHVTLLRDKFRDFARE 158 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCC-SSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCC-CCHHHHHHHHHHHHHHHHH
Confidence 3455677888899999977654443322 2233344444444444433
No 167
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=33.56 E-value=86 Score=31.71 Aligned_cols=48 Identities=17% Similarity=0.110 Sum_probs=32.7
Q ss_pred CcCEEEEecCCCCh-----HHHHHHHHhhcCC-------CCCCcCChhhHHHhHHHHHhh
Q 004210 332 KIHSVELVGSGSRI-----PAISRMLNSLFNR-------EPGRTINASECVARGCALQCA 379 (768)
Q Consensus 332 ~i~~V~LvGG~sri-----p~v~~~l~~~fg~-------~v~~~~n~~eava~Gaa~~a~ 379 (768)
+.+.|+|-||.+.. +.+++.+++.+.. ++....-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 45778888887764 5677788776621 122233457899999998774
No 168
>4ehp_B Catenin alpha-1; adherens junctions, vinculin binding site, vinculin binding helix bundle, cell adhesion; 2.66A {Homo sapiens}
Probab=33.19 E-value=31 Score=29.09 Aligned_cols=78 Identities=13% Similarity=0.154 Sum_probs=48.4
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhCC--CChhhHHHHHHHHHHHHHHHHHHH----HhhhcCCCCCCCcccHHHHHHH
Q 004210 656 KDEEARAQATGALLKCAMDYRKVVEAHS--LPSKVRDAVIDECSKAEEWLREKV----TQQDSLPKDADPILWSTEIKRK 729 (768)
Q Consensus 656 ~e~~~rp~a~~~l~~~l~~~~~~~~~~~--~~~ee~~~v~~~~~~~~~Wl~~~~----~~q~~~~~~~dP~~~~~di~~k 729 (768)
.+..-||..-+.|...|..+..+. ++ -..+.++.+...|+.+.+=|.+.+ ..|.....+++--.-..-+-+|
T Consensus 26 ~~~~~r~~Lee~LE~Iisgaa~~a--DS~~Tr~e~RerIv~eCnavRqaLQdLlseym~~~g~ke~se~L~~aI~km~~k 103 (111)
T 4ehp_B 26 SEERFRPSLEERLESIISGAALMA--DSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKK 103 (111)
T ss_dssp HHHSSSCCHHHHHHHHHHHHTCSC--CCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCCCCCHHHHHHHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHHHH--hhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHH
Confidence 444447777677777676665555 44 345678899999988876655544 4466655555444444455555
Q ss_pred HHHHHH
Q 004210 730 SEALDL 735 (768)
Q Consensus 730 ~~~l~~ 735 (768)
.++|.+
T Consensus 104 t~dLrR 109 (111)
T 4ehp_B 104 TRDLRR 109 (111)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555544
No 169
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=32.73 E-value=5.3e+02 Score=28.28 Aligned_cols=27 Identities=4% Similarity=-0.150 Sum_probs=11.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 004210 688 VRDAVIDECSKAEEWLREKVTQQDSLP 714 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q~~~~ 714 (768)
.++.+...-++...|-.+..+.+.+++
T Consensus 556 ~~~~~~~l~~e~~~~~~~~~~l~~~~~ 582 (597)
T 3oja_B 556 KRAKQAELRQETSLKRQKVKQLEAKKN 582 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333344444444455444444444443
No 170
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=31.33 E-value=76 Score=33.29 Aligned_cols=48 Identities=8% Similarity=-0.032 Sum_probs=32.4
Q ss_pred CcCEEEEecCCCChHH-HHHHHHhhcCC----CCCCcCChhhHHHhHHHHHhh
Q 004210 332 KIHSVELVGSGSRIPA-ISRMLNSLFNR----EPGRTINASECVARGCALQCA 379 (768)
Q Consensus 332 ~i~~V~LvGG~srip~-v~~~l~~~fg~----~v~~~~n~~eava~Gaa~~a~ 379 (768)
+++.|+|.||.+..+. +.+.+++.+.. .+........+.++||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5788999999876533 66777766642 233333445699999997764
No 171
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=31.08 E-value=77 Score=26.35 Aligned_cols=25 Identities=12% Similarity=0.114 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhc
Q 004210 688 VRDAVIDECSKAEEWLREKVTQQDS 712 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q~~ 712 (768)
++..+.+.+++...||.++......
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~ 27 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQA 27 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4667778888899999887554433
No 172
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=30.71 E-value=20 Score=40.36 Aligned_cols=48 Identities=21% Similarity=0.283 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCC--CCcCEEEEecCCCChHHHHHHHHhhcC
Q 004210 310 SLLERMRIPCQKALAGSGLNV--EKIHSVELVGSGSRIPAISRMLNSLFN 357 (768)
Q Consensus 310 ~~~~~i~~~i~~~l~~~~~~~--~~i~~V~LvGG~srip~v~~~l~~~fg 357 (768)
||=..|++-|..+.....+++ +=.+.|++|||++.+|++.-.|.+.+.
T Consensus 476 pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 476 PLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp CHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHH
Confidence 444455555554433222221 124789999999999999999999885
No 173
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=30.39 E-value=20 Score=36.17 Aligned_cols=46 Identities=13% Similarity=0.041 Sum_probs=28.1
Q ss_pred CcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCChhhHHHhHHHHHhh
Q 004210 332 KIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCA 379 (768)
Q Consensus 332 ~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~Gaa~~a~ 379 (768)
+...|+|.||.+.. +.+.|++.+..+......+..+.++||++++.
T Consensus 232 ~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 232 KQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred CCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 45678888887765 55556655543111112345678899997763
No 174
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=29.92 E-value=1e+02 Score=30.98 Aligned_cols=48 Identities=13% Similarity=-0.032 Sum_probs=31.3
Q ss_pred CcCEEEEecCCCCh----HHHHHHHHhhcC----C---------CCCCcCChhhHHHhHHHHHhh
Q 004210 332 KIHSVELVGSGSRI----PAISRMLNSLFN----R---------EPGRTINASECVARGCALQCA 379 (768)
Q Consensus 332 ~i~~V~LvGG~sri----p~v~~~l~~~fg----~---------~v~~~~n~~eava~Gaa~~a~ 379 (768)
+.+.|+|-||.++. +.+++.+.+... . .+....-.+.|.++|||.++.
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 45678888887764 456666665541 1 123344567899999998764
No 175
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=28.68 E-value=33 Score=34.21 Aligned_cols=20 Identities=30% Similarity=0.665 Sum_probs=17.8
Q ss_pred EEEEEcCccceEEEEEEcCC
Q 004210 3 VVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 3 viGID~Gtt~s~va~~~~~~ 22 (768)
++.||+|+|+++.++++.+.
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 58899999999999998665
No 176
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=28.32 E-value=43 Score=34.48 Aligned_cols=45 Identities=18% Similarity=0.166 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004210 311 LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 311 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
....+...++++|+++|+++++|+.|+..|+++++ -+.+.+.||.
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~ 273 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGV 273 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCC
Confidence 45677788999999999999999999999988764 3457777774
No 177
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=27.29 E-value=1.3e+02 Score=31.76 Aligned_cols=48 Identities=8% Similarity=0.017 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCC-ChHHHHHHHHhhcC
Q 004210 307 LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLFN 357 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~fg 357 (768)
.++-+..++.+.|-......+ -.+|.|+++||-+ ..+.||+.+.+.++
T Consensus 317 A~d~f~yri~k~IGa~aa~L~---G~vDaIVFTgGIGEns~~vR~~v~~~l~ 365 (415)
T 3sk3_A 317 AMDVYCHRLAKYIGSYTALMD---GRLDAVVFTGGIGENAAMVRELSLGKLG 365 (415)
T ss_dssp HHHHHHHHHHHHHHHGGGGST---TCCCEEEEEHHHHTTCHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHHHHHHHHhC---CCCCEEEECCccccCCHHHHHHHHhhch
Confidence 344455566665554443321 1589999999987 79999999987663
No 178
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=26.14 E-value=41 Score=27.03 Aligned_cols=28 Identities=21% Similarity=0.195 Sum_probs=25.3
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCcc
Q 004210 141 CVIGVPCYLTDVQRRAYLDAATIAGLKP 168 (768)
Q Consensus 141 ~VitVP~~~~~~qr~~l~~Aa~~AGl~~ 168 (768)
-.++.|+.++..+|..+-..|+..||.-
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4788899999999999999999999863
No 179
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=26.13 E-value=48 Score=33.50 Aligned_cols=46 Identities=11% Similarity=0.031 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004210 310 SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 310 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
.....+...++++|+++|++++||+.|++.|+++++- +.+.+.||.
T Consensus 209 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~---d~~~~~lg~ 254 (313)
T 1zow_A 209 FAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIM---ESARERLGI 254 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHH---HHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHhCC
Confidence 3456777889999999999999999999999986543 456777773
No 180
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=26.10 E-value=1.7e+02 Score=31.39 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=26.4
Q ss_pred CCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCC
Q 004210 193 GPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFD 227 (768)
Q Consensus 193 ~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~ 227 (768)
+...+|.+|+||.++-++++++.++ +++....+.
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~~ 90 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITSEIYS 90 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEEEEEC
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEEEEec
Confidence 4567999999999999999999766 555544433
No 181
>1ywm_A C protein alpha-antigen; beta sandwich, fibronectin fold, antiparallel three-helix BU surface active protein; 1.86A {Streptococcus agalactiae} PDB: 2o0i_1
Probab=25.95 E-value=2.7e+02 Score=25.00 Aligned_cols=53 Identities=17% Similarity=0.187 Sum_probs=36.5
Q ss_pred HHHHHhCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhhc
Q 004210 676 RKVVEAHSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCIM 741 (768)
Q Consensus 676 ~~~~~~~~~~~ee~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i~ 741 (768)
++.+++-+|++.-+.+|...++....=++. -|+++ .||..|+.++..+-+.|.
T Consensus 134 ~kka~Dpkws~~srdeVl~~ld~Ik~DIDn-------nPKtq------~dI~nkI~eV~elEK~Lv 186 (200)
T 1ywm_A 134 RTNANDPKWTEESRTEVLTGLDTIKTDIDN-------NPKTQ------TDIDSKIVEVNELEKLLV 186 (200)
T ss_dssp HHHHTSTTBCHHHHHHHHHHHHHHHHHHHH-------SCCCH------HHHHHHHHHHHHHHTTCC
T ss_pred HhcccCCCCCcccHHHHHHHHHHHhhhhcc-------CCccc------cchHHHhhhhhhhhhccc
Confidence 334433558888888888887776666654 55555 788888888877665544
No 182
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=25.77 E-value=3.3e+02 Score=28.26 Aligned_cols=120 Identities=11% Similarity=0.164 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHH-----------H
Q 004210 612 EGISRNLRDTEEWLYEDGDDESENVYAERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVV-----------E 680 (768)
Q Consensus 612 ~~l~~~l~~~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~-----------~ 680 (768)
.+|..+-.+++.-|....-+...+-|-.-.-+|++-.- |..|......|...++.|+.--+..+..+ +
T Consensus 101 ~kl~~~~~eL~~ai~~~dl~~a~~~YHklsyeikk~av-ll~RVYG~stRe~il~~fk~pA~~l~~~~~y~Itv~~~~~~ 179 (412)
T 2ra1_A 101 TKLDKMRQELKAAVDAKDLKKAEELYHKISYELKTRTV-ILDRVYGQSTRELLRSTFKADAQALRDRLIYDITVAMKARE 179 (412)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTH-HHHTSSCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhccHHHHHHHhhhhhHhhhhcEE-EEecccChhHHHHHHHHhhchHHHHHHHhhhHHHHHHHHHH
Confidence 34444455555556444333356677777778887666 99999999999999998876333322211 0
Q ss_pred -hCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhhcCCC
Q 004210 681 -AHSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCIMRSN 744 (768)
Q Consensus 681 -~~~~~~ee~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i~kpk 744 (768)
+..+.+.++.+....+++...||.. -.|- ..+||..+.+.........+-||
T Consensus 180 ~~~a~~~g~l~~a~~~l~~v~~~l~k----------v~d~--FkaeL~~aa~~a~~aYeaa~tpK 232 (412)
T 2ra1_A 180 AQDAVKAGNLDKAKAALDQVNQYVSK----------VTDA--FKAELQKAAQDAKAAYEAALTPK 232 (412)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHGGG----------CCST--THHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHh----------hhHH--HHHHHHHhhhhhhhhhccccCcc
Confidence 0225667788888999999999854 2233 45788888888777666555444
No 183
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=25.66 E-value=2.3e+02 Score=27.40 Aligned_cols=120 Identities=15% Similarity=0.068 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhh--hhhHHHHHHHHhhHHHHHHHHHHHHhh------HhhccCCHHHHHHHHHHHHHHHHHHhhc
Q 004210 557 KTELSEAVEKEHQLVQQ--DLKMERTKDRKNALESYVYEMRDKISN------IYRSFATESEREGISRNLRDTEEWLYED 628 (768)
Q Consensus 557 ~~e~~~~~~~~~~~~~~--D~~~~~~~~akN~LEs~iy~~r~~l~~------~~~~~~t~~e~~~l~~~l~~~~~WL~~~ 628 (768)
...++.++.++.-+..+ ++.....++.+..|.-|.-++|+++.. .-..-..++-|.++...+.++.+||...
T Consensus 109 ~~~~eelr~~L~P~~eel~~~~~~~~eel~~~L~p~~eelr~kl~~~veelk~~l~P~~ee~r~kl~~~~~el~~~l~p~ 188 (243)
T 2a01_A 109 QEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGGAR 188 (243)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcchh
Q ss_pred CCCccHHHHHHHHHHHHHhHhHHHHhhHh-----HHHHHHHHHHHHHHHHHHHH
Q 004210 629 GDDESENVYAERLEDLKKLVDPIEGRYKD-----EEARAQATGALLKCAMDYRK 677 (768)
Q Consensus 629 g~~a~~~~~~~kl~~L~~~~~pi~~R~~e-----~~~rp~a~~~l~~~l~~~~~ 677 (768)
. ..-.+.+.....+|+....|....+++ .+..-..+..+...+.....
T Consensus 189 ~-~e~~~kl~~~~e~lr~~l~p~~e~lk~~l~p~~e~~~~~l~~~~e~~~~~~~ 241 (243)
T 2a01_A 189 L-AEYHAKATEHLSTLSEKAKPALEDLRQGLLPVLESFKVSFLSALEEYTKKLN 241 (243)
T ss_dssp T-TSSSCCHHHHHHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhc
No 184
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=25.43 E-value=45 Score=34.17 Aligned_cols=46 Identities=13% Similarity=0.221 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004210 310 SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 310 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
-....+...++++|+++|++++||+.|++.+++.++ -+.+.+.||.
T Consensus 221 ~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 266 (331)
T 2x3e_A 221 QAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLDL 266 (331)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 345667788999999999999999999999998765 3457777774
No 185
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=25.23 E-value=78 Score=32.37 Aligned_cols=49 Identities=14% Similarity=0.053 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCC
Q 004210 308 SSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNRE 359 (768)
Q Consensus 308 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~ 359 (768)
.+..++.+...++++|+++|++.+||+.+++..++.+ +-+.+.+.+|.+
T Consensus 229 ~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~lgl~ 277 (333)
T 4dfe_A 229 FKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKLGLP 277 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhCCC
Confidence 3445667778899999999999999999999998865 446777778743
No 186
>2kmf_A Photosystem II 11 kDa protein; PSB27, structure, helical bundle, cyanobacteria, photosynthesis; NMR {Synechocystis SP} PDB: 2knd_A
Probab=25.22 E-value=3.1e+02 Score=23.18 Aligned_cols=90 Identities=12% Similarity=0.149 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHhHhHHHHhhHhHH--HHHHHHHHHHHHHHHHHHHHH---hCCCCh
Q 004210 612 EGISRNLRDTEEWLYEDGDDESENVYAERLEDLKKLVDPIEGRYKDEE--ARAQATGALLKCAMDYRKVVE---AHSLPS 686 (768)
Q Consensus 612 ~~l~~~l~~~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~--~rp~a~~~l~~~l~~~~~~~~---~~~~~~ 686 (768)
+.-.+.++.+.+-|..+.++... .+-.+++++.++-+..||.-.. ..-.....|+++|+....... ...+++
T Consensus 18 ~dT~~Vv~~lr~~l~l~~d~~~~---~~a~~~ar~~ind~vsrYRr~~~v~g~~Sf~tm~tAlNaLAGHY~s~g~~PlPe 94 (115)
T 2kmf_A 18 QDTLTVIATLREAIDLPQDAPNR---QEVQDTARGQINDYISRYRRKGDAGGLKSFTTMQTALNSLAGYYTSYGARPIPE 94 (115)
T ss_dssp HHHHHHHHHHHHHHHSCTTCTTH---HHHHHHHHHHHHHHHHHTHHHHCSSSCHHHHHHHHHHHHHHHHHHHHSSCCCCH
T ss_pred HHHHHHHHHHHHHHcCCCCCccH---HHHHHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHHHHHHHhhcCCCCCCH
Confidence 34445555555666555445554 4556677777888888887542 355667777777775544441 123999
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 004210 687 KVRDAVIDECSKAEEWLR 704 (768)
Q Consensus 687 ee~~~v~~~~~~~~~Wl~ 704 (768)
+-++.|...++.++.-|.
T Consensus 95 k~k~Rl~~el~~AE~al~ 112 (115)
T 2kmf_A 95 KLKKRLQLEFTQAERSIE 112 (115)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999988765
No 187
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=25.21 E-value=42 Score=35.28 Aligned_cols=20 Identities=5% Similarity=0.248 Sum_probs=18.0
Q ss_pred eEEEEEcCccceEEEEEEcC
Q 004210 2 SVVGFDIGNENCVIAAVKQG 21 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~ 21 (768)
.++|||+|.|++++++++.+
T Consensus 3 ~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred eEEEEECCccceeEEEEecc
Confidence 48999999999999998854
No 188
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=23.93 E-value=72 Score=33.67 Aligned_cols=46 Identities=7% Similarity=-0.070 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCC-ChHHHHHHHHhhc
Q 004210 307 LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLF 356 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~f 356 (768)
.++-+..++.+.|-......| .+|.|+++||-+ +.+.|++.+.+.+
T Consensus 301 A~d~f~yri~k~IGa~~a~Lg----gvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 301 ALEIFAYKVKKFIGEYSAVLN----GADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT----SCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhhC----CCCEEEECccccccCHHHHHHHHhhh
Confidence 334455566666655554433 699999999999 9999999998766
No 189
>3nr7_A DNA-binding protein H-NS; dimer, oligomerisation, DNA condensation; 3.70A {Salmonella enterica subsp} PDB: 1lr1_A 1ni8_A
Probab=23.82 E-value=2.8e+02 Score=22.13 Aligned_cols=58 Identities=19% Similarity=0.224 Sum_probs=42.5
Q ss_pred ccHHHHHHHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHH
Q 004210 632 ESENVYAERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVVEAHSLPSKVRDAV 692 (768)
Q Consensus 632 a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~ee~~~v 692 (768)
.+.+.+++-+..|..+ |..|..+......+.+.-+..++.++..+...-|+.+|+...
T Consensus 24 l~le~Lee~leKl~~V---veERree~~~~~~~~~er~~Kl~~~~e~l~~~GI~~eeL~~~ 81 (86)
T 3nr7_A 24 STLETLEEMLEKLEVV---VNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNS 81 (86)
T ss_dssp SCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHhh
Confidence 3455555555555555 558888888888888888888999988886677888887643
No 190
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=23.68 E-value=1.2e+02 Score=33.99 Aligned_cols=47 Identities=19% Similarity=0.177 Sum_probs=0.0
Q ss_pred EEecHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCC
Q 004210 297 GFIRREEFEKLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSR 344 (768)
Q Consensus 297 ~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr 344 (768)
+.||..++.++ +-.-..|..-++-.|+++|++.++|+.|+|.||++.
T Consensus 500 i~itq~DIr~~-qlAKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~ 546 (631)
T 3zyy_X 500 IVITEADIQNL-IRAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGK 546 (631)
T ss_dssp EEEEHHHHHHH-HHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCS
T ss_pred EEEeHHHHHHH-HHHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccc
No 191
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=23.67 E-value=48 Score=33.65 Aligned_cols=21 Identities=24% Similarity=0.393 Sum_probs=18.6
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004210 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~~~~ 22 (768)
.++|||+|.|++++++++..+
T Consensus 8 ~~lgiDiGgt~i~~~l~d~~G 28 (310)
T 3htv_A 8 VVAGVDMGATHIRFCLRTAEG 28 (310)
T ss_dssp EEEEEEECSSEEEEEEEETTS
T ss_pred EEEEEEeCCCEEEEEEECCCC
Confidence 589999999999999998654
No 192
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=23.42 E-value=67 Score=32.75 Aligned_cols=45 Identities=18% Similarity=0.182 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004210 311 LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 311 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
....+...++++|+++|++++||+.+++.++++++- +.+.+.||.
T Consensus 230 ~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~~---~~~~~~lg~ 274 (335)
T 1u6e_A 230 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRIN---ELLVKNLQL 274 (335)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHH---HHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHH---HHHHHHcCC
Confidence 456777889999999999999999999999987653 346666763
No 193
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=22.65 E-value=2.6e+02 Score=29.33 Aligned_cols=47 Identities=2% Similarity=0.058 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCC-ChHHHHHHHHhhcC
Q 004210 307 LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLFN 357 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~fg 357 (768)
.++-+..++.+.|-......+ .+|.|+++||-+ ..+.|++.+.+.++
T Consensus 305 A~d~f~yri~k~IGa~aa~L~----GvDaIVFTgGIGEns~~vR~~i~~~l~ 352 (404)
T 4h0o_A 305 AFDVYIKQLAKTIGGLMVEIG----GLDLLVFTDQMGLEVWQVRKAICDKMK 352 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT----CCSEEEEEHHHHHHCHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHHHhc----CCCEEEECCccccCcHHHHHHHHhhhh
Confidence 344455566666554443322 389999999975 66999999887663
No 194
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=22.46 E-value=4.5e+02 Score=24.04 Aligned_cols=46 Identities=13% Similarity=0.221 Sum_probs=30.6
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhh
Q 004210 553 GGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISN 600 (768)
Q Consensus 553 ~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~ 600 (768)
++++.+-...+......+ ..+.....++.|..|+.|+=+++.++..
T Consensus 66 ~p~~~e~~~~l~~~~~~L--r~~l~kdlee~r~~l~P~~~e~~~~~~~ 111 (185)
T 3r2p_A 66 GPVTQEFWDNLEKETEGL--RQEMSKDLEEVKAKVQPYLDDFQKKWQE 111 (185)
T ss_dssp CSCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHH--HHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 356666555555554443 3345566788888888888888877754
No 195
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=22.41 E-value=49 Score=34.60 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=17.8
Q ss_pred CeEEEEEcCccceEEEEEEc
Q 004210 1 MSVVGFDIGNENCVIAAVKQ 20 (768)
Q Consensus 1 m~viGID~Gtt~s~va~~~~ 20 (768)
|.+||||+|.|++++++++.
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEE
T ss_pred CeEEEEEEccccEEEEEEec
Confidence 45899999999999999875
No 196
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=21.77 E-value=3.7e+02 Score=24.27 Aligned_cols=44 Identities=9% Similarity=0.039 Sum_probs=18.6
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHH
Q 004210 553 GGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKI 598 (768)
Q Consensus 553 ~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l 598 (768)
.|++.+-...+.+....+. .+.....++.|..|+-|+-++|..+
T Consensus 83 ~P~t~el~~~l~~~~e~Lr--~~L~~d~EelR~~l~p~~~el~~~l 126 (165)
T 1gs9_A 83 TPVAEETRARLSKELQAAQ--ARLGADMEDVRGRLVQYRGEVQAML 126 (165)
T ss_dssp CCCCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred cchHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455444444444444332 2233334444444444444444443
No 197
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=21.67 E-value=1.1e+03 Score=28.27 Aligned_cols=27 Identities=19% Similarity=0.068 Sum_probs=13.6
Q ss_pred eEEEEeCCCC--CHHHHHHHHHHHHHcCC
Q 004210 140 NCVIGVPCYL--TDVQRRAYLDAATIAGL 166 (768)
Q Consensus 140 ~~VitVP~~~--~~~qr~~l~~Aa~~AGl 166 (768)
.++||=-+.- |...+..|.--|..+|-
T Consensus 158 sIiisGESGAGKTe~~K~i~~yla~~~~~ 186 (1080)
T 2dfs_A 158 SIIVSGESGAGKTVSAKYAMRYFATVSGS 186 (1080)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTTC
T ss_pred EEEEcCCCCCCccchHHHHHHHHHhhccC
Confidence 4444433333 24556666666655543
No 198
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=21.66 E-value=98 Score=31.80 Aligned_cols=44 Identities=14% Similarity=0.158 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhcCCCCCCcCEEEEecCCC--ChHHHHHHHHhhcCC
Q 004210 315 MRIPCQKALAGSGLNVEKIHSVELVGSGS--RIPAISRMLNSLFNR 358 (768)
Q Consensus 315 i~~~i~~~l~~~~~~~~~i~~V~LvGG~s--rip~v~~~l~~~fg~ 358 (768)
.....+++|+++|+++++|+.|+++.-+. .+|..--.|.+.+|.
T Consensus 66 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl 111 (350)
T 4ewp_A 66 AVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGA 111 (350)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCC
Confidence 34567889999999999999998876554 579999999999984
No 199
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=21.30 E-value=5.5e+02 Score=24.61 Aligned_cols=47 Identities=19% Similarity=0.095 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh----hcCCCCCCCcccHHHHHHHHHHHHHH
Q 004210 689 RDAVIDECSKAEEWLREKVTQQ----DSLPKDADPILWSTEIKRKSEALDLT 736 (768)
Q Consensus 689 ~~~v~~~~~~~~~Wl~~~~~~q----~~~~~~~dP~~~~~di~~k~~~l~~~ 736 (768)
.+++..+++..+.||+++...- ..+. ...+.=....|..-+..++..
T Consensus 130 a~kf~rka~~~e~~L~~~~~~L~~d~~~l~-~~~a~k~~e~ie~dL~~~e~~ 180 (235)
T 2odv_A 130 VTKLQMEAGLAEEQLNQADALLQSDVRLLA-AGKVPQRAGEVERDLDKADSM 180 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TTCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-hhHHHHHHHHHHHHHHHHHHH
Confidence 3567788899999999876643 2222 444444455555444444443
No 200
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=21.29 E-value=60 Score=32.34 Aligned_cols=21 Identities=14% Similarity=0.230 Sum_probs=17.9
Q ss_pred eEEEEEcCccceEEEEEE-cCC
Q 004210 2 SVVGFDIGNENCVIAAVK-QGG 22 (768)
Q Consensus 2 ~viGID~Gtt~s~va~~~-~~~ 22 (768)
..+.||+|+|+++.++++ ++.
T Consensus 24 M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp EEEEEEECSSCEEEEEEETTTE
T ss_pred cEEEEEeCCCeeEEEEEeCCCE
Confidence 368999999999999998 443
No 201
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=21.11 E-value=6.1e+02 Score=25.04 Aligned_cols=22 Identities=5% Similarity=0.046 Sum_probs=17.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 004210 688 VRDAVIDECSKAEEWLREKVTQ 709 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~ 709 (768)
++..+...|+++..|+.++...
T Consensus 114 ~~~~f~~~~~e~~~Wl~~k~~~ 135 (323)
T 3edv_A 114 ELHKFYHDAKEIFGRIQDKHKK 135 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 4556778899999999997654
No 202
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=20.87 E-value=1.7e+02 Score=22.52 Aligned_cols=38 Identities=18% Similarity=0.237 Sum_probs=16.4
Q ss_pred HHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHH
Q 004210 639 ERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYR 676 (768)
Q Consensus 639 ~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~ 676 (768)
+|..+|+..-.-|...-.+..++...+..|++.|.+++
T Consensus 30 ~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfr 67 (72)
T 3nmd_A 30 EKIEELRQRDALIDELELELDQKDELIQMLQNELDKYR 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33444444333333333334444444555555544443
No 203
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=20.71 E-value=3.2e+02 Score=21.69 Aligned_cols=61 Identities=16% Similarity=0.187 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 004210 614 ISRNLRDTEEWLYEDGDDESENVYAERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVV 679 (768)
Q Consensus 614 l~~~l~~~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~ 679 (768)
+.+.|...+.-|..+ ..+.+++..+.++|+++...+.. +...|..-+..++..|..+-+-+
T Consensus 2 lan~La~le~sLe~E--K~S~eeL~kQk~eL~~~l~~l~~---e~~~R~~~i~el~akidd~Lk~l 62 (101)
T 1d7m_A 2 MANRLAGLENSLESE--KVSREQLIKQKDQLNSLLASLES---EGAEREKRLRELEAKLDETLKNL 62 (101)
T ss_dssp HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHhhhh--hccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcc
Confidence 345566666666543 56777888888888888776654 45566666777777776665554
No 204
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=20.68 E-value=2.3e+02 Score=30.35 Aligned_cols=24 Identities=17% Similarity=0.261 Sum_probs=21.4
Q ss_pred CCcEEEEEEeCCceEEEEEEEeeC
Q 004210 193 GPTYVVFVDIGHCDTQVCVASYEN 216 (768)
Q Consensus 193 ~~~~vlv~D~GggT~dvsv~~~~~ 216 (768)
+...++.+|+||.++-+.++.+.+
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEECC
T ss_pred ccceEEEEEeCCCeEEEEEEecCC
Confidence 356789999999999999999976
No 205
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A
Probab=20.66 E-value=6.8e+02 Score=30.48 Aligned_cols=129 Identities=9% Similarity=0.078 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHhhccCCHHHHHHHHHHHHHHHHHHhhcCCCccHHHH
Q 004210 558 TELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIYRSFATESEREGISRNLRDTEEWLYEDGDDESENVY 637 (768)
Q Consensus 558 ~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~t~~e~~~l~~~l~~~~~WL~~~g~~a~~~~~ 637 (768)
+-.+.+.+.+.++...--...+.+.++|.+|.- +|..- ..++ ..+.-...-...|+|+... ...-.|
T Consensus 481 ~~~~~I~~~L~~l~~~gi~~~ele~a~~~le~~---~re~~------~~~~---~gl~~~~~~~~~w~~~~dp-~~~l~~ 547 (1193)
T 3s5m_A 481 EVEDVIMNALKKVVKEGFNKSAVEASINNIEFI---LKEAN------LKTS---KSIDFVFEMTSKLNYNRDP-LLIFEF 547 (1193)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH---HHHHT------TSTT---HHHHHHHHHHHHHHTTCCT-TTTTSH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH---HHhcc------CCCC---cHHHHHHHHHHHHHcCCCH-HHHHHH
Confidence 334555556666766656667777888888753 33210 1111 2344455667889997632 222346
Q ss_pred HHHHHHHHHhHh----HHHHhhHhHHH----------H------HHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHH
Q 004210 638 AERLEDLKKLVD----PIEGRYKDEEA----------R------AQATGALLKCAMDYRKVVEAHSLPSKVRDAVIDECS 697 (768)
Q Consensus 638 ~~kl~~L~~~~~----pi~~R~~e~~~----------r------p~a~~~l~~~l~~~~~~~~~~~~~~ee~~~v~~~~~ 697 (768)
.+.++.|+.... -++.-++.+-. . .+..+..+..|...+ .++++++++.|.....
T Consensus 548 ~~~l~~l~~~~~~~~~~~~~li~~yll~n~~~~~~~~~P~~~~~~~~~~~e~~~L~~~~-----~~ls~~~~~~i~~~~~ 622 (1193)
T 3s5m_A 548 EKYLNIVKNKIKNEPMYLEKFVEKHFINNAHRSVILLEGDENYAQEQENLEKQELKKRI-----ENFNEQEKEQVIKNFE 622 (1193)
T ss_dssp HHHHHHHHHHHHHSTTHHHHHHHHHTTTCCCEEEEEEEEESSHHHHHHHHHHHHHHHHH-----HHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcChHHHHHHHHHHhccCCceEEEEEEcCCCHHHHHHHHHHHHHHHHH-----hhCCHHHHHHHHHHHH
Confidence 666666665431 12222222210 0 111222333333332 3369999999999988
Q ss_pred HHHHHHH
Q 004210 698 KAEEWLR 704 (768)
Q Consensus 698 ~~~~Wl~ 704 (768)
+...|-+
T Consensus 623 ~L~~~q~ 629 (1193)
T 3s5m_A 623 ELSKYKN 629 (1193)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8888765
No 206
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=20.24 E-value=1e+02 Score=31.63 Aligned_cols=50 Identities=12% Similarity=0.039 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCC
Q 004210 307 LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNRE 359 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~ 359 (768)
+.+..+..+...++++|+++|++.+||+.+++..++.+ +.+.+.+.+|.+
T Consensus 240 v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~---i~~~~~~~lgl~ 289 (345)
T 3s21_A 240 LLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRP---HTAAFVKSFGID 289 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHH---HHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH---HHHHHHHHcCcC
Confidence 44445567778889999999999999999999998855 456777777743
Done!