Query 004211
Match_columns 768
No_of_seqs 404 out of 2738
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 17:48:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004211.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004211hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 100.0 5E-110 2E-114 968.9 71.5 644 1-679 2-648 (675)
2 4b9q_A Chaperone protein DNAK; 100.0 6.6E-98 2E-102 861.8 70.1 590 1-657 2-604 (605)
3 2kho_A Heat shock protein 70; 100.0 1.6E-96 6E-101 850.1 60.6 588 2-656 3-603 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 7.4E-91 2.5E-95 795.7 50.4 542 2-598 5-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 2.4E-80 8.3E-85 703.6 53.0 499 2-588 3-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 3.6E-64 1.2E-68 557.7 42.9 380 1-383 23-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 1.4E-62 4.8E-67 543.4 43.1 374 3-382 20-394 (394)
8 4gni_A Putative heat shock pro 100.0 1.8E-62 6.2E-67 544.6 39.6 379 1-385 13-405 (409)
9 1dkg_D Molecular chaperone DNA 100.0 1.7E-60 5.7E-65 524.4 39.5 372 2-382 3-383 (383)
10 1jce_A ROD shape-determining p 100.0 2.1E-40 7.1E-45 358.7 23.3 309 2-382 4-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 1.2E-32 4.1E-37 273.1 27.0 211 391-657 2-216 (219)
12 1u00_A HSC66, chaperone protei 100.0 2.3E-31 7.7E-36 267.0 28.4 211 393-659 1-215 (227)
13 2fsj_A Hypothetical protein TA 100.0 3.1E-28 1.1E-32 262.0 13.8 227 113-379 95-343 (346)
14 2ych_A Competence protein PILM 99.9 6.1E-27 2.1E-31 256.4 15.8 317 3-379 15-373 (377)
15 3h1q_A Ethanolamine utilizatio 99.9 1.1E-25 3.9E-30 234.8 22.0 202 117-378 71-272 (272)
16 3n8e_A Stress-70 protein, mito 99.9 4.9E-26 1.7E-30 217.8 15.5 160 388-598 18-181 (182)
17 1k8k_A ARP3, actin-like protei 99.9 5.8E-25 2E-29 243.8 15.1 227 138-380 107-387 (418)
18 4a2a_A Cell division protein F 99.9 3.3E-24 1.1E-28 235.5 18.3 199 152-381 168-394 (419)
19 2fxu_A Alpha-actin-1, actin, a 99.9 6.8E-25 2.3E-29 239.3 11.7 305 2-379 6-348 (375)
20 3h0x_A 78 kDa glucose-regulate 99.9 1.3E-22 4.3E-27 189.4 16.2 147 392-588 2-152 (152)
21 3dob_A Heat shock 70 kDa prote 99.9 1.6E-22 5.3E-27 188.3 14.2 147 392-588 2-152 (152)
22 2zgy_A Plasmid segregation pro 99.9 6.7E-23 2.3E-27 218.7 11.3 226 112-378 73-319 (320)
23 3dqg_A Heat shock 70 kDa prote 99.9 2.1E-22 7.2E-27 187.3 12.9 146 392-588 2-151 (151)
24 2op6_A Heat shock 70 kDa prote 99.9 2.6E-21 8.9E-26 181.8 15.2 147 392-588 2-152 (152)
25 4ehu_A Activator of 2-hydroxyi 99.8 7E-18 2.4E-22 175.9 23.9 184 163-382 68-256 (276)
26 1k8k_B ARP2, actin-like protei 99.8 3.3E-20 1.1E-24 203.3 1.8 213 139-379 105-363 (394)
27 3js6_A Uncharacterized PARM pr 99.7 3.5E-17 1.2E-21 175.8 12.5 208 139-383 114-339 (355)
28 1q5l_A Chaperone protein DNAK; 99.6 3.8E-15 1.3E-19 135.8 11.1 101 387-494 14-118 (135)
29 4apw_A ALP12; actin-like prote 99.6 3.8E-16 1.3E-20 166.4 4.9 204 139-381 106-325 (329)
30 3qb0_A Actin-related protein 4 99.4 4.8E-12 1.7E-16 140.2 17.9 178 2-245 24-209 (498)
31 3dwl_A Actin-related protein 3 99.4 3.5E-13 1.2E-17 147.9 5.6 223 139-379 124-395 (427)
32 3lof_A Heat shock 70 kDa prote 99.2 4.2E-11 1.5E-15 105.9 11.1 82 576-658 3-85 (113)
33 2d0o_A DIOL dehydratase-reacti 99.1 2.4E-10 8.2E-15 123.3 13.2 196 152-380 368-604 (610)
34 4fo0_A Actin-related protein 8 99.1 1.5E-09 5E-14 125.5 20.4 94 140-246 200-294 (593)
35 1nbw_A Glycerol dehydratase re 99.1 2.7E-10 9.3E-15 123.4 11.5 193 154-379 372-605 (607)
36 2p32_A Heat shock 70 kDa prote 99.0 6.6E-10 2.2E-14 99.2 7.8 81 576-657 12-93 (120)
37 1hux_A Activator of (R)-2-hydr 99.0 3.9E-08 1.3E-12 101.3 21.5 172 168-381 76-257 (270)
38 1ud0_A HSC70, 70 kDa heat-shoc 98.9 1.2E-09 3.9E-14 96.8 5.3 77 580-657 2-79 (113)
39 2ews_A Pantothenate kinase; PA 98.3 4.2E-05 1.4E-09 78.4 19.2 75 299-378 207-286 (287)
40 4am6_A Actin-like protein ARP8 97.8 6.1E-05 2.1E-09 84.4 10.4 124 139-280 222-347 (655)
41 2ivn_A O-sialoglycoprotein end 97.1 0.042 1.5E-06 57.7 21.6 66 311-381 228-299 (330)
42 3vov_A Glucokinase, hexokinase 97.0 0.029 9.8E-07 58.2 18.4 44 164-212 98-141 (302)
43 2i7n_A Pantothenate kinase 1; 96.9 0.0085 2.9E-07 63.0 13.4 69 305-378 279-358 (360)
44 3vgl_A Glucokinase; ROK family 96.6 0.19 6.6E-06 52.3 21.7 45 164-213 96-140 (321)
45 1t6c_A Exopolyphosphatase; alp 96.6 0.011 3.6E-07 61.7 11.7 78 154-239 100-177 (315)
46 3eno_A Putative O-sialoglycopr 96.6 0.16 5.5E-06 53.2 20.3 68 311-383 233-306 (334)
47 3r8e_A Hypothetical sugar kina 96.4 0.13 4.4E-06 53.7 18.2 46 163-213 116-162 (321)
48 2ch5_A NAGK protein; transfera 96.4 1.1 3.7E-05 47.1 25.7 46 137-182 70-118 (347)
49 2e2o_A Hexokinase; acetate and 96.3 0.44 1.5E-05 48.9 22.1 48 332-380 239-287 (299)
50 3l0q_A Xylulose kinase; xlylul 96.2 0.0061 2.1E-07 69.1 7.5 84 298-385 408-494 (554)
51 3lof_A Heat shock 70 kDa prote 96.2 0.025 8.5E-07 49.2 9.7 73 657-741 3-79 (113)
52 4db3_A Glcnac kinase, N-acetyl 96.1 0.88 3E-05 47.4 22.9 45 164-213 120-164 (327)
53 2qm1_A Glucokinase; alpha-beta 96.0 0.18 6.2E-06 52.5 17.5 44 164-212 108-151 (326)
54 4htl_A Beta-glucoside kinase; 96.0 0.2 6.9E-06 51.6 17.5 49 332-380 237-291 (297)
55 4bc3_A Xylulose kinase; transf 96.0 0.0099 3.4E-07 67.1 7.6 78 305-383 407-484 (538)
56 3hz6_A Xylulokinase; xylulose, 95.9 0.0096 3.3E-07 66.7 7.4 81 299-385 374-455 (511)
57 2zf5_O Glycerol kinase; hypert 95.9 0.011 3.7E-07 66.2 7.5 80 300-384 365-444 (497)
58 2itm_A Xylulose kinase, xylulo 95.9 0.0081 2.8E-07 66.9 6.5 53 332-384 386-438 (484)
59 3i8b_A Xylulose kinase; strain 95.9 0.014 4.8E-07 65.4 8.3 79 300-383 395-474 (515)
60 3ll3_A Gluconate kinase; xylul 95.8 0.014 4.9E-07 65.2 7.7 79 300-385 364-445 (504)
61 3ifr_A Carbohydrate kinase, FG 95.7 0.017 5.7E-07 64.7 7.9 81 300-385 371-452 (508)
62 3g25_A Glycerol kinase; IDP007 95.6 0.019 6.6E-07 64.1 8.1 82 300-385 374-456 (501)
63 3ezw_A Glycerol kinase; glycer 95.5 0.019 6.6E-07 64.5 7.4 83 299-385 371-454 (526)
64 2aa4_A Mannac kinase, putative 95.4 0.077 2.6E-06 54.4 11.4 43 164-212 96-138 (289)
65 3h3n_X Glycerol kinase; ATP-bi 95.4 0.023 7.7E-07 63.6 7.8 83 299-385 372-455 (506)
66 2gup_A ROK family protein; sug 95.4 1.8 6E-05 44.1 21.5 42 164-212 94-135 (292)
67 3jvp_A Ribulokinase; PSI-II, N 95.3 0.022 7.5E-07 64.8 7.1 77 300-383 410-490 (572)
68 2p3r_A Glycerol kinase; glycer 95.2 0.025 8.6E-07 63.3 7.4 53 332-385 401-453 (510)
69 2dpn_A Glycerol kinase; thermu 95.1 0.027 9.2E-07 62.9 7.1 80 300-383 368-448 (495)
70 4e1j_A Glycerol kinase; struct 95.0 0.016 5.5E-07 65.0 4.8 53 332-385 425-477 (520)
71 2d4w_A Glycerol kinase; alpha 94.9 0.044 1.5E-06 61.2 8.2 81 300-384 373-454 (504)
72 3mdq_A Exopolyphosphatase; str 94.9 0.087 3E-06 54.8 9.7 78 155-239 93-170 (315)
73 2w40_A Glycerol kinase, putati 94.8 0.049 1.7E-06 60.9 8.0 81 300-384 376-458 (503)
74 2uyt_A Rhamnulokinase; rhamnos 94.5 0.054 1.8E-06 60.3 7.6 78 298-381 361-440 (489)
75 2hoe_A N-acetylglucosamine kin 94.5 0.57 1.9E-05 50.0 15.3 42 164-212 188-229 (380)
76 2ap1_A Putative regulator prot 94.4 2.2 7.7E-05 44.2 19.5 44 164-212 120-163 (327)
77 1woq_A Inorganic polyphosphate 94.1 2 6.9E-05 43.1 17.8 45 164-212 114-158 (267)
78 1z05_A Transcriptional regulat 93.9 1.2 4.1E-05 48.3 16.6 44 164-212 208-251 (429)
79 2yhw_A Bifunctional UDP-N-acet 93.8 3.8 0.00013 42.7 19.9 44 164-212 131-174 (343)
80 3en9_A Glycoprotease, O-sialog 93.4 7.3 0.00025 43.5 22.4 60 311-375 232-297 (540)
81 1z6r_A MLC protein; transcript 93.2 2.3 8E-05 45.6 17.5 44 164-212 186-229 (406)
82 4e81_A Chaperone protein DNAK; 92.4 1.1 3.6E-05 43.8 11.8 45 682-741 167-211 (219)
83 2p32_A Heat shock 70 kDa prote 92.2 0.39 1.3E-05 42.0 7.7 70 660-741 15-88 (120)
84 1zbs_A Hypothetical protein PG 92.2 2.5 8.7E-05 43.0 15.1 69 306-380 210-280 (291)
85 3h6e_A Carbohydrate kinase, FG 91.7 0.16 5.3E-06 56.2 5.6 72 305-381 362-436 (482)
86 3bex_A Type III pantothenate k 89.8 2.3 7.7E-05 42.3 11.6 21 2-22 4-24 (249)
87 1u00_A HSC66, chaperone protei 88.7 3 0.0001 40.8 11.4 45 682-741 164-208 (227)
88 1ud0_A HSC70, 70 kDa heat-shoc 88.7 0.56 1.9E-05 40.4 5.4 65 665-741 6-74 (113)
89 1zc6_A Probable N-acetylglucos 87.6 26 0.00088 35.5 25.0 64 307-379 227-292 (305)
90 3cer_A Possible exopolyphospha 87.6 0.86 2.9E-05 47.8 7.0 80 155-239 106-191 (343)
91 1u6z_A Exopolyphosphatase; alp 85.9 0.88 3E-05 50.6 6.3 76 155-239 100-176 (513)
92 1sz2_A Glucokinase, glucose ki 85.8 34 0.0012 35.1 21.8 50 162-212 99-155 (332)
93 1iv0_A Hypothetical protein; r 85.5 0.52 1.8E-05 39.4 3.2 22 1-22 1-22 (98)
94 3ven_A O-carbamoyltransferase 83.7 15 0.0005 41.0 14.7 77 302-383 281-360 (576)
95 3d2f_A Heat shock protein homo 82.8 4.5 0.00015 46.5 10.6 70 661-741 549-621 (675)
96 3epq_A Putative fructokinase; 82.2 4.8 0.00016 41.2 9.6 51 154-212 90-140 (302)
97 4b9q_A Chaperone protein DNAK; 81.4 7.1 0.00024 44.3 11.5 45 682-741 555-599 (605)
98 2kho_A Heat shock protein 70; 81.3 5.1 0.00017 45.5 10.2 45 682-741 555-599 (605)
99 3o8m_A Hexokinase; rnaseh-like 80.7 18 0.00061 39.5 13.8 58 151-215 185-244 (485)
100 1vhx_A Putative holliday junct 79.7 0.96 3.3E-05 41.1 2.8 22 1-22 3-24 (150)
101 3hi0_A Putative exopolyphospha 79.3 2.2 7.6E-05 47.2 6.2 74 154-237 103-177 (508)
102 2yhx_A Hexokinase B; transfera 79.0 7.1 0.00024 42.4 10.0 56 152-214 164-221 (457)
103 4g9i_A Hydrogenase maturation 79.0 5.1 0.00017 46.6 9.2 65 313-382 691-761 (772)
104 3aap_A Ectonucleoside triphosp 76.3 2.8 9.5E-05 44.0 5.6 20 194-213 139-158 (353)
105 1hjr_A Holliday junction resol 72.4 3.5 0.00012 37.7 4.5 19 1-19 1-19 (158)
106 3qbx_A Anhydro-N-acetylmuramic 70.3 9 0.00031 40.1 7.5 71 307-380 261-336 (371)
107 3ttc_A HYPF, transcriptional r 69.6 8.5 0.00029 43.7 7.7 65 311-380 583-651 (657)
108 3cqy_A Anhydro-N-acetylmuramic 67.7 8.6 0.00029 40.2 6.7 69 306-380 267-342 (370)
109 4ep4_A Crossover junction endo 66.8 4 0.00014 37.6 3.6 21 1-21 1-21 (166)
110 1nu0_A Hypothetical protein YQ 65.9 4.4 0.00015 36.1 3.6 21 2-22 4-24 (138)
111 3cj1_A Ectonucleoside triphosp 63.4 9.1 0.00031 41.6 6.2 20 194-213 189-208 (456)
112 3vth_A Hydrogenase maturation 62.9 11 0.00039 43.5 7.2 65 313-382 679-749 (761)
113 3mcp_A Glucokinase; structural 62.3 62 0.0021 33.8 12.4 45 164-213 108-165 (366)
114 3kbt_A Beta-I spectrin, spectr 61.6 1.4E+02 0.0047 30.1 15.3 23 688-710 218-240 (326)
115 3s84_A Apolipoprotein A-IV; fo 61.1 79 0.0027 31.5 12.2 23 577-599 65-87 (273)
116 2w40_A Glycerol kinase, putati 57.5 6.1 0.00021 43.7 3.7 21 2-22 5-25 (503)
117 3ll3_A Gluconate kinase; xylul 57.1 5.8 0.0002 43.9 3.4 21 2-22 5-25 (504)
118 3ezw_A Glycerol kinase; glycer 55.5 5.7 0.00019 44.2 3.0 21 2-22 5-25 (526)
119 2dpn_A Glycerol kinase; thermu 55.5 5.8 0.0002 43.8 3.0 21 2-22 3-23 (495)
120 1u5p_A Spectrin alpha chain, b 55.1 1.4E+02 0.0047 28.0 14.8 48 689-737 111-158 (216)
121 3l0q_A Xylulose kinase; xlylul 54.5 7.3 0.00025 43.6 3.7 21 2-22 6-26 (554)
122 2p3r_A Glycerol kinase; glycer 54.2 6.8 0.00023 43.4 3.3 21 2-22 4-24 (510)
123 1quu_A Human skeletal muscle a 54.1 1.6E+02 0.0054 28.4 19.4 142 577-734 16-175 (250)
124 2e1z_A Propionate kinase; TDCD 53.7 2.2E+02 0.0076 30.0 14.6 45 308-356 310-355 (415)
125 3hm8_A Hexokinase-3; glucose, 53.6 1.6E+02 0.0054 31.6 13.7 58 150-214 159-219 (445)
126 1bdg_A Hexokinase; phosphotran 53.5 1.1E+02 0.0036 33.0 12.6 131 3-213 70-229 (451)
127 3ifr_A Carbohydrate kinase, FG 53.3 7.2 0.00025 43.2 3.3 21 2-22 8-28 (508)
128 1cza_N Hexokinase type I; stru 53.1 21 0.00073 42.4 7.6 58 150-214 630-690 (917)
129 3g25_A Glycerol kinase; IDP007 52.6 7.4 0.00025 42.9 3.3 21 2-22 7-27 (501)
130 3h3n_X Glycerol kinase; ATP-bi 51.9 8.5 0.00029 42.5 3.7 21 2-22 6-26 (506)
131 2zf5_O Glycerol kinase; hypert 51.8 7.8 0.00027 42.7 3.3 21 2-22 4-24 (497)
132 4bc3_A Xylulose kinase; transf 51.7 7.8 0.00027 43.2 3.3 21 2-22 11-31 (538)
133 3hz6_A Xylulokinase; xylulose, 51.3 7.7 0.00026 42.9 3.2 21 2-22 6-26 (511)
134 3i8b_A Xylulose kinase; strain 51.3 8.5 0.00029 42.6 3.5 21 2-22 6-27 (515)
135 3h6e_A Carbohydrate kinase, FG 50.8 6.5 0.00022 43.1 2.4 21 2-22 7-27 (482)
136 3djc_A Type III pantothenate k 50.2 9.2 0.00032 38.2 3.2 21 2-22 3-23 (266)
137 2uyt_A Rhamnulokinase; rhamnos 50.1 6.5 0.00022 43.2 2.3 20 2-21 5-24 (489)
138 3jvp_A Ribulokinase; PSI-II, N 50.0 9 0.00031 43.1 3.5 21 2-22 6-27 (572)
139 3cet_A Conserved archaeal prot 49.8 13 0.00043 38.3 4.2 70 300-377 244-321 (334)
140 3f9m_A Glucokinase; hexokinase 49.5 1.3E+02 0.0045 32.4 12.4 58 150-214 183-243 (470)
141 4e1j_A Glycerol kinase; struct 48.8 9.3 0.00032 42.4 3.3 21 2-22 27-47 (520)
142 4ijn_A Acetate kinase, acetoki 47.3 1.1E+02 0.0036 32.2 10.8 46 308-357 303-349 (398)
143 2itm_A Xylulose kinase, xylulo 47.2 9.4 0.00032 41.9 3.0 20 3-22 2-21 (484)
144 3zx3_A Ectonucleoside triphosp 46.9 23 0.00078 38.2 5.8 44 168-213 151-199 (452)
145 3f31_A Spectrin alpha chain, b 46.8 1.3E+02 0.0043 26.6 10.1 82 633-737 13-94 (149)
146 3nmd_A CGMP dependent protein 45.5 60 0.002 25.0 6.2 45 562-607 27-71 (72)
147 3r6n_A Desmoplakin; spectrin r 45.4 2.8E+02 0.0095 29.7 14.2 49 688-737 94-142 (450)
148 2dfs_A Myosin-5A; myosin-V, in 45.2 99 0.0034 37.4 11.7 18 583-600 922-939 (1080)
149 2d4w_A Glycerol kinase; alpha 44.8 11 0.00037 41.7 3.0 21 2-22 3-23 (504)
150 3uul_A Utrophin; spectrin repe 42.7 1.4E+02 0.0049 24.6 13.3 85 611-705 4-96 (118)
151 1hnj_A Beta-ketoacyl-acyl carr 41.8 26 0.00088 35.7 5.2 49 307-358 212-260 (317)
152 3uul_A Utrophin; spectrin repe 41.4 54 0.0019 27.4 6.5 25 688-712 3-27 (118)
153 2iak_A Bullous pemphigoid anti 40.2 1.8E+02 0.0063 27.5 10.9 25 688-712 121-145 (224)
154 3khy_A Propionate kinase; csgi 38.8 1.7E+02 0.0059 30.4 10.7 45 308-356 293-338 (384)
155 3o8m_A Hexokinase; rnaseh-like 38.2 67 0.0023 34.9 8.0 30 193-222 78-108 (485)
156 3f9m_A Glucokinase; hexokinase 37.2 83 0.0028 34.0 8.4 52 193-247 75-135 (470)
157 2yhx_A Hexokinase B; transfera 36.6 1.2E+02 0.0041 32.6 9.7 52 193-244 59-116 (457)
158 3uun_A Dystrophin; triple heli 36.1 1.8E+02 0.0062 23.9 13.7 86 610-705 3-96 (119)
159 3edu_A Beta-I spectrin, spectr 35.1 2.4E+02 0.0084 26.3 10.9 23 688-710 109-131 (218)
160 3kbt_A Beta-I spectrin, spectr 34.7 3.5E+02 0.012 26.9 13.9 47 689-736 112-158 (326)
161 3htv_A D-allose kinase, alloki 34.5 75 0.0026 32.2 7.3 48 332-379 239-298 (310)
162 1ub7_A 3-oxoacyl-[acyl-carrier 34.4 35 0.0012 34.8 4.8 47 309-358 216-262 (322)
163 2ebd_A 3-oxoacyl-[acyl-carrier 33.7 37 0.0012 34.3 4.8 46 310-358 207-252 (309)
164 1saz_A Probable butyrate kinas 33.3 60 0.0021 34.1 6.5 48 332-379 295-347 (381)
165 3uun_A Dystrophin; triple heli 32.9 69 0.0024 26.7 5.8 25 688-712 3-27 (119)
166 2y6x_A PSB27, photosystem II 1 32.9 2.2E+02 0.0076 24.0 10.9 91 612-705 14-109 (113)
167 3pdy_A Plectin; cytoskeleton, 31.4 3.3E+02 0.011 25.4 14.1 47 688-735 106-152 (210)
168 4ehp_B Catenin alpha-1; adhere 30.9 36 0.0012 28.7 3.2 78 656-735 26-109 (111)
169 3epq_A Putative fructokinase; 29.9 97 0.0033 31.2 7.2 22 1-22 3-24 (302)
170 1zxo_A Conserved hypothetical 29.6 21 0.00071 36.0 2.1 46 332-379 232-277 (291)
171 2h3g_X Biosynthetic protein; p 28.0 32 0.0011 34.2 3.1 20 3-22 2-21 (268)
172 2a01_A Apolipoprotein A-I; fou 27.6 1.5E+02 0.005 28.9 7.8 167 554-739 66-238 (243)
173 2ra1_A Surface layer protein; 26.8 5.5E+02 0.019 26.6 12.7 120 612-744 101-232 (412)
174 1mzj_A Beta-ketoacylsynthase I 26.2 48 0.0016 34.0 4.2 45 311-358 229-273 (339)
175 1ywm_A C protein alpha-antigen 26.2 2.5E+02 0.0086 25.2 7.9 53 676-741 134-186 (200)
176 4am6_A Actin-like protein ARP8 26.0 27 0.00093 39.2 2.3 25 333-357 501-525 (655)
177 3sk3_A Acetate kinase, acetoki 25.1 1.5E+02 0.0051 31.3 7.6 48 307-357 317-365 (415)
178 3r6n_A Desmoplakin; spectrin r 25.0 6.5E+02 0.022 26.8 20.1 126 610-735 94-249 (450)
179 1msz_A DNA-binding protein smu 24.6 49 0.0017 26.6 2.9 28 141-168 34-61 (86)
180 3hm8_A Hexokinase-3; glucose, 24.5 1.8E+02 0.0063 31.0 8.3 33 193-226 57-89 (445)
181 1zow_A 3-oxoacyl-[acyl-carrier 24.3 54 0.0018 33.1 4.1 46 310-358 209-254 (313)
182 3zyy_X Iron-sulfur cluster bin 24.2 1.2E+02 0.004 34.1 7.0 47 297-344 500-546 (631)
183 1saz_A Probable butyrate kinas 24.1 46 0.0016 35.0 3.5 20 2-21 3-22 (381)
184 1gs9_A Apolipoprotein E, APOE4 24.1 4E+02 0.014 24.0 9.4 44 553-598 83-126 (165)
185 4dfe_A 3-oxoacyl-[acyl-carrier 23.7 86 0.003 32.0 5.6 49 308-359 229-277 (333)
186 2x3e_A 3-oxoacyl-[acyl-carrier 23.3 50 0.0017 33.8 3.6 46 310-358 221-266 (331)
187 1kae_A HDH, histidinol dehydro 23.1 1E+02 0.0034 32.7 5.7 44 138-185 154-198 (434)
188 3htv_A D-allose kinase, alloki 22.9 51 0.0017 33.5 3.5 21 2-22 8-28 (310)
189 2f9w_A Pantothenate kinase; CO 22.9 53 0.0018 32.7 3.5 21 2-22 24-45 (271)
190 1g99_A Acetate kinase; alpha/b 22.3 73 0.0025 33.6 4.5 46 307-356 301-347 (408)
191 2q2r_A Glucokinase 1, putative 21.8 50 0.0017 34.5 3.3 20 1-20 29-48 (373)
192 3nr7_A DNA-binding protein H-N 21.6 3.1E+02 0.011 21.8 9.2 57 633-692 25-81 (86)
193 3nuw_A 2-OXO-3-deoxygalactonat 21.5 89 0.003 31.4 4.8 44 334-379 248-291 (295)
194 1u6e_A 3-oxoacyl-[acyl-carrier 21.4 76 0.0026 32.3 4.6 46 310-358 229-274 (335)
195 3edv_A Spectrin beta chain, br 21.4 6E+02 0.02 25.1 17.5 27 688-714 220-246 (323)
196 1nbw_A Glycerol dehydratase re 21.1 52 0.0018 36.2 3.2 33 139-171 131-163 (607)
197 1zxo_A Conserved hypothetical 21.1 12 0.00042 37.8 -1.7 44 138-182 58-103 (291)
198 2kmf_A Photosystem II 11 kDa p 20.6 3.9E+02 0.013 22.6 10.9 90 612-704 18-112 (115)
199 4ewp_A 3-oxoacyl-[acyl-carrier 20.6 1E+02 0.0036 31.6 5.5 45 315-359 66-112 (350)
200 4h0o_A Acetate kinase; askha ( 20.6 2.6E+02 0.0088 29.3 8.2 47 307-357 305-352 (404)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=4.6e-110 Score=968.88 Aligned_cols=644 Identities=35% Similarity=0.607 Sum_probs=589.5
Q ss_pred CeEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChH
Q 004211 1 MSVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDD 80 (768)
Q Consensus 1 m~viGID~GTt~s~va~~~~g~~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~ 80 (768)
|++||||||||||+||++.+|+ ++++.|+.|+|.+||+|+|.+++++||..|..+...+|.++++++|||||+.++++.
T Consensus 2 m~~iGIDlGTtns~va~~~~g~-~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 80 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRG-IDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPD 80 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTE-EEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTT
T ss_pred CcEEEEEcCCCcEEEEEEECCe-eEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHH
Confidence 6799999999999999999887 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHH
Q 004211 81 VQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDA 160 (768)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 160 (768)
++.+.+++||.++..++|.+.+.+.+.|+...++|+++++++|++|+..|+.+++.++.++|||||+||++.||+++++|
T Consensus 81 v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~A 160 (675)
T 3d2f_A 81 FEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADA 160 (675)
T ss_dssp HHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 99999999999999888999999998887788999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCceeeccchHHHHHHhhhcccCCCC--CCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHH
Q 004211 161 ATIAGLKPLRLMHDCTATALGYGIYKTDFSN--VGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEV 238 (768)
Q Consensus 161 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~--~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~ 238 (768)
+++|||+++++++||+|||++|++.+..++. ..+.++||||+||||||+|++++.+|.++|+++.|+.++||++||..
T Consensus 161 a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~ 240 (675)
T 3d2f_A 161 ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240 (675)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHH
Confidence 9999999999999999999999987644332 45789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCCeeeEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHH
Q 004211 239 LSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIP 318 (768)
Q Consensus 239 l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~ 318 (768)
|++|+..+|.+++++++..+++++.||+.+||++|+.||.+.++.+.+++++++.++.+.|||++|+++|.++++++..+
T Consensus 241 l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~ 320 (675)
T 3d2f_A 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEP 320 (675)
T ss_dssp HHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHH
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888999999989999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhhHhcCCccccceEEeeccce
Q 004211 319 CQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSPQYCVREFEVQDSFPF 398 (768)
Q Consensus 319 i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~ls~~~~~~~~~~~d~~~~ 398 (768)
++++|+.+++.+.+|+.|+||||+||+|+|++.|++.||.++..+.||++|||+|||++|+.+++.++++++.+.|++||
T Consensus 321 i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~Dv~p~ 400 (675)
T 3d2f_A 321 VTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPY 400 (675)
T ss_dssp HHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEEEECS
T ss_pred HHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEeeeec
Confidence 99999999999999999999999999999999999999988889999999999999999999999999999999999999
Q ss_pred eeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCceEEEEEEeccccCCCCCCCcceeEEecCCCCCCCCc-ceEE
Q 004211 399 SIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNGFQLQAFYADQNELPSVVSPQISSFMIGPFQTSHAET-ARVK 477 (768)
Q Consensus 399 ~i~i~~~~~~~~~~~~~~l~~~~~~~p~~k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~-~~i~ 477 (768)
+||+++.++.. .+.+.+||++|+++|++++.+|++..++++.++|++...++.++|..||+|.|+|+++++.|. ++|+
T Consensus 401 slgi~~~~~~~-~~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i~ 479 (675)
T 3d2f_A 401 SVSYSWDKQVE-DEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVK 479 (675)
T ss_dssp CEEEEECCTTC-SCSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEEE
T ss_pred ceEeeecCCCC-CcceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccccCceeeEEEecCcCCCCCCCcceEE
Confidence 99999987632 235899999999999999999999999999998866555554489999999999999988876 5999
Q ss_pred EEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeeeecccCCCCCH
Q 004211 478 VRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPVNENVNGGMTK 557 (768)
Q Consensus 478 v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i~~~~~~~ls~ 557 (768)
|+|.+|.||+|+|++++++++.+++ +.|.++++.+++|+... ++||+
T Consensus 480 v~f~id~~Gil~V~a~~~~~~~~~~--------------------------------~~~~t~~~~~i~i~~~~-~~ls~ 526 (675)
T 3d2f_A 480 LKLRCDPSGLHTIEEAYTIEDIEAG--------------------------------SDTKTVKKDDLTIVAHT-FGLDA 526 (675)
T ss_dssp EEEEECTTSCEEEEEEEEECC--------------------------------------CCCCEEEECEEEEEC-SSCCH
T ss_pred EEEEEcCCCcEEEEEEEEeeccccc--------------------------------ccccCcceeeEEEecCC-CCCCH
Confidence 9999999999999998776532110 01566778888888764 47999
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHhhccCCHHHHHHHHHHHHHHHHHHhhcCCCccHHHH
Q 004211 558 TELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIYRSFATESEREGISRNLRDTEEWLYEDGDDESENVY 637 (768)
Q Consensus 558 ~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~t~~e~~~l~~~l~~~~~WL~~~g~~a~~~~~ 637 (768)
++++++++++.+|..+|+.++++.++||+||+|||++|++|++.|..++++++|++|...|+++++|||++++++++++|
T Consensus 527 ~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~ 606 (675)
T 3d2f_A 527 KKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKY 606 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHH
Confidence 99999999999999999999999999999999999999999877889999999999999999999999998888999999
Q ss_pred HHHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 004211 638 AERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVV 679 (768)
Q Consensus 638 ~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~ 679 (768)
++|+++|+++++||..|+.|++.||.+++.|++.|+.+++++
T Consensus 607 ~~~~~~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~~~~~~~~ 648 (675)
T 3d2f_A 607 IAKYEELASLGNIIRGRYLAKEEEKKQAIRSKQEASQMAAMA 648 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=6.6e-98 Score=861.79 Aligned_cols=590 Identities=25% Similarity=0.457 Sum_probs=546.4
Q ss_pred CeEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeC-CceeecHHHHhhhhhCCcchHhHHHHhcCCCCCCh
Q 004211 1 MSVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSE-KQRFLGSAGAASAMMNPKSTISQVKRLLGRKFRED 79 (768)
Q Consensus 1 m~viGID~GTt~s~va~~~~g~~~~ii~n~~~~r~~Ps~V~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~ 79 (768)
..|||||||||||+||++.+|. ++++.|..|+|.+||+|+|.+ +++++|..|..++..+|.++++++|||||+.++++
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~-~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTT-PRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTE-EEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CcEEEEEcCCCcEEEEEEECCE-EEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 1499999999999999999888 899999999999999999975 57999999999999999999999999999999999
Q ss_pred HHHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHH
Q 004211 80 DVQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLD 159 (768)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~ 159 (768)
.++...+++||.++..++|.+.+.+. + ..++|+++++++|++|++.++.+++.++.++|||||+||++.||+++++
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~~~~~--~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~ 156 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAADNGDAWVEVK--G--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKD 156 (605)
T ss_dssp HHHHHHTTCSSEEEECTTSBEEEEET--T--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCceEEEEC--C--EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 99999999999999988898877663 3 5799999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeC----CeEEEEEEeCCCCCchhhH
Q 004211 160 AATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYEN----GHMKILSHAFDESLGGRDF 235 (768)
Q Consensus 160 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~----~~~~vl~~~~~~~lGG~~~ 235 (768)
|+++|||+++++++||+|||++|++... ..+.++||||+||||||+|++++.+ +.++++++.++.++||++|
T Consensus 157 Aa~~AGl~v~~li~EP~AAAlaygl~~~----~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~ 232 (605)
T 4b9q_A 157 AGRIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDF 232 (605)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHHHTTSC----CSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHH
T ss_pred HHHHcCCceEEEeCcHHHHHHHhhhhcc----CCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHH
Confidence 9999999999999999999999998653 3468999999999999999999987 8999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCCeeeEEEeccccC----cceEEEecHHHHHHHHHHH
Q 004211 236 DEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNE----KDVKGFIRREEFEKLSSSL 311 (768)
Q Consensus 236 d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~i~~l~~~----~d~~~~itr~~fe~~~~~~ 311 (768)
|..|++|+..+|..+++.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+ .++.+.|||++|+++|+++
T Consensus 233 D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~ 312 (605)
T 4b9q_A 233 DSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDL 312 (605)
T ss_dssp HHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998877654 5788999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhhHhcCCccccceE
Q 004211 312 LERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSPQYCVREFE 391 (768)
Q Consensus 312 ~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~ls~~~~~~~~~ 391 (768)
++++..+++++|+.+++...+|+.|+||||+||+|+|+++|++.||.++..+.||++|||+|||++|+.+++. ++++.
T Consensus 313 ~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~--~~~~~ 390 (605)
T 4b9q_A 313 VNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVL 390 (605)
T ss_dssp HHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTS--SCSEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCC--CCceE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986 56899
Q ss_pred EeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCC
Q 004211 392 VQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQ 467 (768)
Q Consensus 392 ~~d~~~~~i~i~~~~~~~~~~~~~~l~~~~~~~p~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~ 467 (768)
+.|++|++||+++.++ .+.+||++|+++|++++.+|++..+ +.|.+++++. ....+|..||+|.++++|
T Consensus 391 l~dv~p~slgie~~~g-----~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~--~~~~~n~~lg~~~l~~i~ 463 (605)
T 4b9q_A 391 LLDVTPLSLGIETMGG-----VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGER--KRAADNKSLGQFNLDGIN 463 (605)
T ss_dssp EECBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSC--SBGGGSEEEEEEEEECCC
T ss_pred EEeeeeeEEEEEEcCC-----EEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccc--cccccCCEeeEEEEeCCC
Confidence 9999999999999887 8999999999999999999987544 6777766543 345789999999999999
Q ss_pred CCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeee
Q 004211 468 TSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPV 547 (768)
Q Consensus 468 ~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i 547 (768)
+++.|.++|+|+|.+|.||+|+|++.+ +.++++..++|
T Consensus 464 ~~~~g~~~i~v~f~id~~gil~v~a~~------------------------------------------~~tg~~~~i~i 501 (605)
T 4b9q_A 464 PAPRGMPQIEVTFDIDADGILHVSAKD------------------------------------------KNSGKEQKITI 501 (605)
T ss_dssp CCSTTCCCEEEEEEECTTSCEEEEEEE------------------------------------------TTTCCEECCEE
T ss_pred CCcCCCceEEEEEEEcCCcEEEEEEEe------------------------------------------cCCCcEEEEEe
Confidence 999999999999999999999999863 44566677888
Q ss_pred ecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHhhccCCHHHHHHHHHHHHHHHHHHhh
Q 004211 548 NENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIYRSFATESEREGISRNLRDTEEWLYE 627 (768)
Q Consensus 548 ~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~t~~e~~~l~~~l~~~~~WL~~ 627 (768)
+... +||+++++++++++.++..+|+..+++.++||+||+|+|++|+.|++ +..++++++|+.+...++++++||+.
T Consensus 502 ~~~~--~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~ 578 (605)
T 4b9q_A 502 KASS--GLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALKG 578 (605)
T ss_dssp ESCC--SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHS
T ss_pred cCCC--CCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 7663 69999999999999999999999999999999999999999999975 78899999999999999999999997
Q ss_pred cCCCccHHHHHHHHHHHHHhHhHHHHhhHh
Q 004211 628 DGDDESENVYAERLEDLKKLVDPIEGRYKD 657 (768)
Q Consensus 628 ~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 657 (768)
+ +.++|++++++|++.+.||..++.+
T Consensus 579 ~----~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 579 E----DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp S----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred C----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6 4789999999999999999988753
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=1.6e-96 Score=850.12 Aligned_cols=588 Identities=25% Similarity=0.463 Sum_probs=541.8
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEee-CCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChH
Q 004211 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFS-EKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDD 80 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~~~~ii~n~~~~r~~Ps~V~~~-~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~ 80 (768)
.+||||||||||+||++.+|. ++++.|..|+|.+||+|+|. +++++||..|..+...+|.++++++||+||+.++++.
T Consensus 3 ~viGIDlGTt~s~va~~~~g~-~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTT-PRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTE-EEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred CEEEEEcCCcCEEEEEEECCE-EEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 489999999999999999887 89999999999999999995 4678999999999999999999999999999999999
Q ss_pred HHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHH
Q 004211 81 VQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDA 160 (768)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 160 (768)
++...+.+||.++...+|.+.+.+ .| ..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~i~~--~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A 157 (605)
T 2kho_A 82 VQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHHHCSSCEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEECCCCceEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHH
Confidence 998889999999888889888776 34 57999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEee----CCeEEEEEEeCCCCCchhhHH
Q 004211 161 ATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYE----NGHMKILSHAFDESLGGRDFD 236 (768)
Q Consensus 161 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~----~~~~~vl~~~~~~~lGG~~~d 236 (768)
++.|||+++++++||+|||++|++... ..+.++||||+||||||+|++++. ++.++|+++.|+.++||++||
T Consensus 158 ~~~AGl~v~~li~EP~AAAlay~l~~~----~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D 233 (605)
T 2kho_A 158 GRIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFD 233 (605)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTTTSS----SSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTH
T ss_pred HHHcCCceEEEecCHHHHHHHhhhccc----CCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHH
Confidence 999999999999999999999997652 257889999999999999999998 789999999999999999999
Q ss_pred HHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCCeeeEEEeccccC----cceEEEecHHHHHHHHHHHH
Q 004211 237 EVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNE----KDVKGFIRREEFEKLSSSLL 312 (768)
Q Consensus 237 ~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~i~~l~~~----~d~~~~itr~~fe~~~~~~~ 312 (768)
..|++|+.++|+++++.++..+++++.+|+.+||++|+.||.+..+.+.+++++++ .++.+.|||++|+++|+|++
T Consensus 234 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~ 313 (605)
T 2kho_A 234 SRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLV 313 (605)
T ss_dssp HHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTT
T ss_pred HHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999899999887653 56788999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhhHhcCCccccceEE
Q 004211 313 ERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSPQYCVREFEV 392 (768)
Q Consensus 313 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~ls~~~~~~~~~~ 392 (768)
+++..+++++|+.+++...+|+.|+||||+||+|+|++.|++.||.++..+.||++|||+|||++|+.+++. ++++.+
T Consensus 314 ~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~--~~~~~l 391 (605)
T 2kho_A 314 NRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLL 391 (605)
T ss_dssp GGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTS--CCCCCC
T ss_pred HHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCC--ccCceE
Confidence 999999999999999999999999999999999999999999999889999999999999999999999876 678999
Q ss_pred eeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCCC
Q 004211 393 QDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQT 468 (768)
Q Consensus 393 ~d~~~~~i~i~~~~~~~~~~~~~~l~~~~~~~p~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~~ 468 (768)
.|++|++||+++.++ .+.+||++|+++|++++.+|++..+ +.|.+++++ +....+|..||+|.++++|+
T Consensus 392 ~dv~p~slgi~~~~g-----~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge--~~~~~~n~~lg~~~l~~i~~ 464 (605)
T 2kho_A 392 LDVTPLSLGIETMGG-----VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGE--RKRAADNKSLGQFNLDGINP 464 (605)
T ss_dssp SBCCCCCEEEEETTT-----EEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESS--CSBGGGSEEEEEEEEECCCS
T ss_pred EeeeeeeccccccCC-----ceEEEEecccccCccceEEEEecCCCceEEEEEEEecc--CcccccCcEEeEEEecCCCC
Confidence 999999999999887 8999999999999999999987443 667776654 33347899999999999999
Q ss_pred CCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeeee
Q 004211 469 SHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPVN 548 (768)
Q Consensus 469 ~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i~ 548 (768)
++.|.++|+|+|.+|.||+|+|++.+ +.++++..++|+
T Consensus 465 ~~~g~~~i~v~f~id~~gil~v~a~~------------------------------------------~~tg~~~~i~i~ 502 (605)
T 2kho_A 465 APRGMPQIEVTFDIDADGILHVSAKD------------------------------------------KNSGKEQKITIK 502 (605)
T ss_dssp CCTTCSCEEEEEEECTTSCEEEEEEE------------------------------------------TTTCCEEEEEEC
T ss_pred CCCCCcEEEEEEEEcCCCceeEEEEE------------------------------------------cCCCceeecccc
Confidence 99999999999999999999999863 334556677777
Q ss_pred cccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHhhccCCHHHHHHHHHHHHHHHHHHhhc
Q 004211 549 ENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIYRSFATESEREGISRNLRDTEEWLYED 628 (768)
Q Consensus 549 ~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~t~~e~~~l~~~l~~~~~WL~~~ 628 (768)
.. .+||+++++++++++.++..+|+..+++.++||+||+|||++|+.|++ +..++++++|+.+...++++++||+++
T Consensus 503 ~~--~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~ 579 (605)
T 2kho_A 503 AS--SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALKGE 579 (605)
T ss_dssp TT--SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHTTSS
T ss_pred cc--cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 66 479999999999999999999999999999999999999999999976 888999999999999999999999853
Q ss_pred CCCccHHHHHHHHHHHHHhHhHHHHhhH
Q 004211 629 GDDESENVYAERLEDLKKLVDPIEGRYK 656 (768)
Q Consensus 629 g~~a~~~~~~~kl~~L~~~~~pi~~R~~ 656 (768)
+.++|++++++|+++++||..|+.
T Consensus 580 ----~~~~~~~~~~~l~~~~~~~~~~~~ 603 (605)
T 2kho_A 580 ----DKAAIEAKMQELAQVSQKLMEIAQ 603 (605)
T ss_dssp ----CHHHHHHHHHHHHTTCHHHHHHHC
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 788999999999999999999865
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=7.4e-91 Score=795.70 Aligned_cols=542 Identities=31% Similarity=0.540 Sum_probs=502.0
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChHH
Q 004211 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDDV 81 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 81 (768)
.+||||||||||+||++.+|. ++++.|+.|+|++||+|+|.+++++||..|..+...+|.++++++|||||+.++++.+
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~-~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 83 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGK-VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVV 83 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSS-EEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHH
T ss_pred CEEEEEeCcccEEEEEEECCE-EEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHH
Confidence 489999999999999998887 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHHH
Q 004211 82 QKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDAA 161 (768)
Q Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa 161 (768)
+..++++||.++.. +|.+.+.+.+.+....++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 84 ~~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~ 162 (554)
T 1yuw_A 84 QSDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162 (554)
T ss_dssp HHHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 99999999999854 78889999998888899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHH
Q 004211 162 TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSS 241 (768)
Q Consensus 162 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~ 241 (768)
+.|||+++++++||+|||++|++.... ..+..+||||+||||||+|++++.+|.++|+++.++.++||++||..|++
T Consensus 163 ~~AGl~~~~li~EP~AAAlay~~~~~~---~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~ 239 (554)
T 1yuw_A 163 TIAGLNVLRIINEPTAAAIAYGLDKKV---GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVN 239 (554)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTCSTTC---SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHcCCCeEEEeCcHHHHHHHHHhhccC---CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHH
Confidence 999999999999999999999976531 24689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCCeeeEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHHH
Q 004211 242 YFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQK 321 (768)
Q Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~ 321 (768)
|+..+|.++++.++..+++++.+|+.+||++|+.||.+.++.+.+++++++.++...|+|++|+++++++++++..++++
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~ 319 (554)
T 1yuw_A 240 HFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEK 319 (554)
T ss_dssp HHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHH
T ss_pred HHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcC-CCCCCcCCchhHHHhhHHHHhhHhcC--CccccceEEeeccce
Q 004211 322 ALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFN-REPGRTINASECVARGCALQCAMLSP--QYCVREFEVQDSFPF 398 (768)
Q Consensus 322 ~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg-~~v~~~~n~~eava~GAa~~a~~ls~--~~~~~~~~~~d~~~~ 398 (768)
+|+.+++...+|+.|+|+||+||+|+|++.|++.|+ .++..+.||++|||+|||++|+.+++ .++++++.+.|++|+
T Consensus 320 ~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~ 399 (554)
T 1yuw_A 320 ALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPL 399 (554)
T ss_dssp HHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSS
T ss_pred HHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeee
Confidence 999999999999999999999999999999999995 88889999999999999999999987 467889999999999
Q ss_pred eeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecC--c--eEEEEEEeccccCCCCCCCcceeEEecCCCCCCCCcc
Q 004211 399 SIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSN--G--FQLQAFYADQNELPSVVSPQISSFMIGPFQTSHAETA 474 (768)
Q Consensus 399 ~i~i~~~~~~~~~~~~~~l~~~~~~~p~~k~~~~~~~~--~--~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~ 474 (768)
+||+++.++ .+.+||++|+++|.+++.+|.+.. + +.|.+++++. ....+|..||+|.|.++|+++.|.+
T Consensus 400 slgi~~~~g-----~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~--~~~~~n~~lg~~~l~~i~~~~~g~~ 472 (554)
T 1yuw_A 400 SLGIETAGG-----VMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGER--AMTKDNNLLGKFELTGIPPAPRGVP 472 (554)
T ss_dssp CEEEEETTT-----EEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSS--SBGGGSEEEEEEEEECCCCCSTTCC
T ss_pred EEEEEecCc-----eEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCc--cccccCcEEEEEEEeCCCCCccccc
Confidence 999999877 899999999999999999998743 2 6677766543 3347889999999999999999999
Q ss_pred eEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeeeecccCCC
Q 004211 475 RVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPVNENVNGG 554 (768)
Q Consensus 475 ~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i~~~~~~~ 554 (768)
+|+|+|.+|.||+|+|++.+ +.++++..++|+... ++
T Consensus 473 ~i~v~f~id~~gil~v~a~~------------------------------------------~~tg~~~~~~i~~~~-~~ 509 (554)
T 1yuw_A 473 QIEVTFDIDANGILNVSAVD------------------------------------------KSTGKENKITITNDK-GR 509 (554)
T ss_dssp CEEEEEEECTTCCEEEEEEE------------------------------------------TTTCCEEEEEECCCS-SC
T ss_pred EEEEEEEEccCceEEEEEEe------------------------------------------ccCCCceeEEEecCC-CC
Confidence 99999999999999999863 334455667777654 57
Q ss_pred CCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHH
Q 004211 555 MTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKI 598 (768)
Q Consensus 555 ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l 598 (768)
||+++++++++++.+|..+|+..+++.++||+||+|||++|++|
T Consensus 510 ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 510 LSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp SCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred CCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999998765
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=2.4e-80 Score=703.61 Aligned_cols=499 Identities=28% Similarity=0.497 Sum_probs=450.3
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChHH
Q 004211 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDDV 81 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~ 81 (768)
.+||||||||||+||++.+|. ++++.|..|++++||+|+|.+++++||..|..+...+| ++++++||+||+++
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~-~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~----- 75 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGE-VKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDY----- 75 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTE-EEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCC-----
T ss_pred CEEEEEcCCceEEEEEEECCE-EEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCc-----
Confidence 489999999999999999887 89999999999999999998788999999999999999 99999999999743
Q ss_pred HhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHHH
Q 004211 82 QKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDAA 161 (768)
Q Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa 161 (768)
.+ ...| ..++|+++++++|++|+..++.+++.++..+|||||++|++.||+++++|+
T Consensus 76 ---------~~------------~~~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~ 132 (509)
T 2v7y_A 76 ---------KV------------EIEG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAG 132 (509)
T ss_dssp ---------CE------------EETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred ---------EE------------EECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 21 1122 368999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHH
Q 004211 162 TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSS 241 (768)
Q Consensus 162 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~ 241 (768)
+.||++++++++||+|||++|++.. ..+.++||||+||||||++++++.++.++++++.++..+||++||+.|++
T Consensus 133 ~~AGl~~~~li~Ep~AAAlay~~~~-----~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~ 207 (509)
T 2v7y_A 133 RIAGLEVERIINEPTAAALAYGLDK-----EEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIID 207 (509)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTGGG-----SCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHcCCCeEEEecCHHHHHHHHhhcc-----CCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999865 35789999999999999999999989999999999999999999999999
Q ss_pred HHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCCeeeEEEeccccC----cceEEEecHHHHHHHHHHHHHHHHH
Q 004211 242 YFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNE----KDVKGFIRREEFEKLSSSLLERMRI 317 (768)
Q Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~i~~l~~~----~d~~~~itr~~fe~~~~~~~~~i~~ 317 (768)
++.++|.++++.++..+++++.+|+.+||++|+.||.+..+.+.+++++++ .++.+.|+|++|+++++|+++++..
T Consensus 208 ~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~ 287 (509)
T 2v7y_A 208 YLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMG 287 (509)
T ss_dssp HHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHH
T ss_pred HHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHH
Confidence 999999999999998899999999999999999999998888998877652 4677899999999999999999999
Q ss_pred HHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhhHhcCCccccceEEeeccc
Q 004211 318 PCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSPQYCVREFEVQDSFP 397 (768)
Q Consensus 318 ~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~ls~~~~~~~~~~~d~~~ 397 (768)
+++++|+.+++...+|+.|+|+||+|++|+|+++|++.||.++..+.||++|||+|||++|+.+++. ++++.+.|++|
T Consensus 288 ~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~--~~~~~~~dv~p 365 (509)
T 2v7y_A 288 PVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGE--VKDVVLLDVTP 365 (509)
T ss_dssp HHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTC--CCCCCCCCBCS
T ss_pred HHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCC--ccCceEEEeec
Confidence 9999999999998899999999999999999999999999888999999999999999999999876 57899999999
Q ss_pred eeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCCCCCCCc
Q 004211 398 FSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQTSHAET 473 (768)
Q Consensus 398 ~~i~i~~~~~~~~~~~~~~l~~~~~~~p~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~ 473 (768)
++||+++.++ .+.+||++|+++|.+++.+|.+..+ +.|.+++++. ....+|..||+|.++++++++.|.
T Consensus 366 ~slgi~~~~~-----~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~--~~~~~~~~lg~~~l~~i~~~~~g~ 438 (509)
T 2v7y_A 366 LSLGIETMGG-----VFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGER--PMAADNKSLGRFQLTGIPPAPRGV 438 (509)
T ss_dssp SEEEEEETTT-----EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESS--SBGGGSEEEEEEEEECCCCCCTTC
T ss_pred cccceeecCC-----ceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCc--cccccCcEEEEEEEeCCCCCCCcc
Confidence 9999999887 8999999999999999999987433 6777776643 334788999999999999998898
Q ss_pred ceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeeeecccCC
Q 004211 474 ARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPVNENVNG 553 (768)
Q Consensus 474 ~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i~~~~~~ 553 (768)
++|+|+|.+|.+|+|+|++.+ +.++++..++|+.. .
T Consensus 439 ~~i~v~f~id~~gil~v~a~~------------------------------------------~~~g~~~~~~i~~~--~ 474 (509)
T 2v7y_A 439 PQIEVTFDIDANGIVHVRAKD------------------------------------------LGTNKEQSITIKSS--S 474 (509)
T ss_dssp SCEEEEEEECTTSCEEEEEEE------------------------------------------TTTCCEEEEEECSS--C
T ss_pred cEEEEEEEEcCCceEEEEEEE------------------------------------------cCCCcEEEEEEEec--C
Confidence 999999999999999999863 33455666777766 4
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHH
Q 004211 554 GMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALE 588 (768)
Q Consensus 554 ~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LE 588 (768)
+||+++++++++++.+|..+|+..+++.++||+||
T Consensus 475 ~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 475 GLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp SCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred CCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 79999999999999999999999999999999997
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=3.6e-64 Score=557.67 Aligned_cols=380 Identities=36% Similarity=0.618 Sum_probs=360.7
Q ss_pred CeEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChH
Q 004211 1 MSVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDD 80 (768)
Q Consensus 1 m~viGID~GTt~s~va~~~~g~~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~ 80 (768)
|.+||||||||||+||++.+|. ++++.|..|++++||+|+|.+++++||..|..+..++|.++++++||+||+.++++.
T Consensus 23 ~~viGID~GTt~s~va~~~~g~-~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~ 101 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQHGK-VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDAT 101 (404)
T ss_dssp CCCEEEEECSSEEEEEEEETTE-EEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHH
T ss_pred CCEEEEEcCCccEEEEEEECCe-eEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHH
Confidence 5799999999999999999888 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHH
Q 004211 81 VQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDA 160 (768)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 160 (768)
++...+.+||.+.. .+|...+.+.+.++...++|+++++++|++|++.++.+++.++..+|||||++|++.||+++++|
T Consensus 102 ~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a 180 (404)
T 3i33_A 102 VQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDA 180 (404)
T ss_dssp HHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHH
Confidence 99999999999986 57888999999888889999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHH
Q 004211 161 ATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLS 240 (768)
Q Consensus 161 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~ 240 (768)
++.||++++.+++||+|||++|+..... ....+..++|||+||||||++++++.++.++++++.++..+||.+||+.|+
T Consensus 181 ~~~AGl~~~~li~Ep~AAa~~~~~~~~~-~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~ 259 (404)
T 3i33_A 181 GTITGLNVLRIINEPTAAAIAYGLDKKG-CAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 259 (404)
T ss_dssp HHHHTCEEEEEEEHHHHHHHHTTTTSSC-SSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred HHHcCCCeEEEeccHHHHHHHHHhhccc-ccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 9999999999999999999999876531 112678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCCeeeEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHH
Q 004211 241 SYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQ 320 (768)
Q Consensus 241 ~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~ 320 (768)
+++.++|..+++.++..+++.+.+|+.+||++|+.||.+....+.++.++++.++.+.|+|++|+++++++++++..+|.
T Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~ 339 (404)
T 3i33_A 260 SHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVE 339 (404)
T ss_dssp HHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHH
T ss_pred HHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhc-CCCCCCcCCchhHHHhhHHHHhhHhcC
Q 004211 321 KALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF-NREPGRTINASECVARGCALQCAMLSP 383 (768)
Q Consensus 321 ~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f-g~~v~~~~n~~eava~GAa~~a~~ls~ 383 (768)
++|+.+++...+|+.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|+++++
T Consensus 340 ~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 340 KALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 999999999899999999999999999999999999 688989999999999999999999875
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.4e-62 Score=543.38 Aligned_cols=374 Identities=35% Similarity=0.606 Sum_probs=358.0
Q ss_pred EEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChHHH
Q 004211 3 VVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDDVQ 82 (768)
Q Consensus 3 viGID~GTt~s~va~~~~g~~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~ 82 (768)
+||||||||||+||++.+|. ++++.|..|++++||+|+|.++++++|..|......+|.++++++|++||+.++++.++
T Consensus 20 viGID~GTt~s~va~~~~g~-~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 98 (394)
T 3qfu_A 20 VIGIDLGTTYSCVAVMKNGK-TEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQ 98 (394)
T ss_dssp CEEEEECSSEEEEEEECSSC-EEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHH
T ss_pred EEEEEeCcCcEEEEEEECCe-eEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHH
Confidence 69999999999999999888 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHHHH
Q 004211 83 KDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDAAT 162 (768)
Q Consensus 83 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~ 162 (768)
...+++||.+. ..+|...+.+.+.++...++|+++++++|++|+..++.+++.++..+|||||++|++.||+++++|++
T Consensus 99 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~ 177 (394)
T 3qfu_A 99 KDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGT 177 (394)
T ss_dssp HHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 99999999988 56788889998888888999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHH
Q 004211 163 IAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSY 242 (768)
Q Consensus 163 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~ 242 (768)
.||++++.+++||+|||++|+.... ..+..++|||+||||||++++++.++.++++++.++..+||.+||+.|+++
T Consensus 178 ~aGl~~~~li~Ep~Aaa~~~~~~~~----~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~ 253 (394)
T 3qfu_A 178 IAGLNVLRIVNEPTAAAIAYGLDKS----DKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQ 253 (394)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTTTSC----SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HcCCceEEEecCHHHHHHHHhhccC----CCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHH
Confidence 9999999999999999999987653 457899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCCeeeEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHHHH
Q 004211 243 FAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQKA 322 (768)
Q Consensus 243 l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~ 322 (768)
+..+|..+++.++..+++.+.+|+.+||++|+.||.+....+.++.+.++.++...++|++|+++++++++++..+|.++
T Consensus 254 l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~ 333 (394)
T 3qfu_A 254 LIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKV 333 (394)
T ss_dssp HHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhc-CCCCCCcCCchhHHHhhHHHHhhHhc
Q 004211 323 LAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF-NREPGRTINASECVARGCALQCAMLS 382 (768)
Q Consensus 323 l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f-g~~v~~~~n~~eava~GAa~~a~~ls 382 (768)
|+.+++...+|+.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|++++
T Consensus 334 l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 334 LQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999999889999999999999999999999999 78899999999999999999999875
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.8e-62 Score=544.55 Aligned_cols=379 Identities=24% Similarity=0.395 Sum_probs=344.1
Q ss_pred CeEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChH
Q 004211 1 MSVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDD 80 (768)
Q Consensus 1 m~viGID~GTt~s~va~~~~g~~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~ 80 (768)
|.+||||||||||+||++.+|. ++++.|..|++++||+|+|.+++++||..|..+..++|.+++.++|+++|+.++++.
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~-~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~ 91 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDK-AEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVD 91 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTE-EEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCc-eEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchh
Confidence 3699999999999999996565 999999999999999999999999999999999999999999999999999987766
Q ss_pred HHhhhccCCceeeecCCCCEEEEEEec----CceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHH
Q 004211 81 VQKDLKLFPFETCESHDGGILIMLEYL----GETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRA 156 (768)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~----~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~ 156 (768)
++.. ..++.+. ..+|.+.+.+... +....++++++++++|++|++.++.+++.++.++|||||++|++.||++
T Consensus 92 ~~~~--~~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~ 168 (409)
T 4gni_A 92 PTHN--HASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAA 168 (409)
T ss_dssp CGGG--TTSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHH
T ss_pred hhhh--cccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHH
Confidence 5443 3344443 3478888888765 3567899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHH
Q 004211 157 YLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFD 236 (768)
Q Consensus 157 l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d 236 (768)
+++|++.|||+++.+++||+|||++|+.... ....+..+||||+||||||++++++.++.++++++.++..+||.+||
T Consensus 169 ~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~--~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d 246 (409)
T 4gni_A 169 LIAAAAAADLEVLQLISEPAAAVLAYDARPE--ATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALD 246 (409)
T ss_dssp HHHHHHHTTCEEEEEEEHHHHHHHHTTC--------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHH
T ss_pred HHHHHHHcCCCeEEEEcCHHHHHHHHhcccc--cCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHH
Confidence 9999999999999999999999999987542 12567899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcc--cCccCChHHHHHHHHHHHHHhhhcCCCCeeeEEEeccccCcceEEEecHHHHHHHHHHHHHH
Q 004211 237 EVLSSYFAAQFKQQYD--IDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLER 314 (768)
Q Consensus 237 ~~l~~~l~~~~~~~~~--~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~i~~l~~~~d~~~~itr~~fe~~~~~~~~~ 314 (768)
..|++++..+|..+++ .++..+++.+.+|+.+||++|+.||.+..+.+.++++.++.++...|||++|++++++++++
T Consensus 247 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~ 326 (409)
T 4gni_A 247 KVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEG 326 (409)
T ss_dssp HHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHH
Confidence 9999999999999888 88888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCC--C------CCcCCchhHHHhhHHHHhhHhcCCc
Q 004211 315 MRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNRE--P------GRTINASECVARGCALQCAMLSPQY 385 (768)
Q Consensus 315 i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~--v------~~~~n~~eava~GAa~~a~~ls~~~ 385 (768)
+..+|+++|+.+++...+|+.|+|+||+|++|+|++.|++.||.. + ....||++|||+|||++|+....+.
T Consensus 327 i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~~ 405 (409)
T 4gni_A 327 FNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEHH 405 (409)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhhh
Confidence 999999999999999899999999999999999999999999855 3 6789999999999999999877653
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.7e-60 Score=524.43 Aligned_cols=372 Identities=31% Similarity=0.561 Sum_probs=342.7
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeC-CceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChH
Q 004211 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSE-KQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDD 80 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~~~~ii~n~~~~r~~Ps~V~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~ 80 (768)
.+||||||||||+||++.+|. ++++.|+.|++++||+|+|.. ++++||..|......+|.++++++|++||+.+.++.
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~-~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 81 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTT-PRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTE-EEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHH
T ss_pred cEEEEEcCCCCEEEEEEECCe-eEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHH
Confidence 489999999999999998887 899999999999999999964 568999999999999999999999999999999999
Q ss_pred HHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHH
Q 004211 81 VQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDA 160 (768)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 160 (768)
++...+.+||.+....+|.+.+.+ .| ..++++++++++|+++++.++.+++.++..+|||||++|++.||+++++|
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 157 (383)
T 1dkg_D 82 VQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (383)
T ss_dssp HHHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 988888999999888888877776 34 47999999999999999999999888899999999999999999999999
Q ss_pred HHHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEee----CCeEEEEEEeCCCCCchhhHH
Q 004211 161 ATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYE----NGHMKILSHAFDESLGGRDFD 236 (768)
Q Consensus 161 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~----~~~~~vl~~~~~~~lGG~~~d 236 (768)
++.||++++.+++||+|||++|+.... ..+..+||||+||||||++++++. ++.++++++.++..+||++||
T Consensus 158 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~----~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id 233 (383)
T 1dkg_D 158 GRIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFD 233 (383)
T ss_dssp HHHTTCEESCCCBHHHHHHHHHTCCC-----CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHH
T ss_pred HHHcCCceEEEeccHHHHHHHHHhccC----CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHH
Confidence 999999999999999999999987542 256789999999999999999998 578899998888999999999
Q ss_pred HHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCCeeeEEEecccc---C-cceEEEecHHHHHHHHHHHH
Q 004211 237 EVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMN---E-KDVKGFIRREEFEKLSSSLL 312 (768)
Q Consensus 237 ~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~i~~l~~---~-~d~~~~itr~~fe~~~~~~~ 312 (768)
+.|++++.++|..+++.++..+++.+.+|+.+||++|+.||......+.++.+++ + .++.+.|+|++|+++++|++
T Consensus 234 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~ 313 (383)
T 1dkg_D 234 SRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLV 313 (383)
T ss_dssp HHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHH
Confidence 9999999999998888888889999999999999999999998888888887654 2 45678999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhhHhc
Q 004211 313 ERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLS 382 (768)
Q Consensus 313 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~ls 382 (768)
+++..++.++|+.+++...+|+.|+|+||+|++|+|++.|++.||.++..+.||++|||+|||++|++++
T Consensus 314 ~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 314 NRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999999999999888999999999999999999999999998898999999999999999998764
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=2.1e-40 Score=358.74 Aligned_cols=309 Identities=22% Similarity=0.319 Sum_probs=242.0
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCC--ce-eecHHHHhhhhhCCcchHhHHHHhcCCCCCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEK--QR-FLGSAGAASAMMNPKSTISQVKRLLGRKFRE 78 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~~~~ii~n~~~~r~~Ps~V~~~~~--~~-~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~ 78 (768)
.+|||||||+||++++..+ + ++. .+||+|+|..+ ++ ++|++|.....++|.++..
T Consensus 4 ~~igIDlGT~~s~v~~~~~-~---~~~------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~------------ 61 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGK-G---IVV------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA------------ 61 (344)
T ss_dssp CEEEEEECSSEEEEEETTT-E---EEE------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE------------
T ss_pred ceEEEEcCcCcEEEEECCC-C---EEE------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE------------
Confidence 5899999999999987432 2 222 27999999865 34 7999998766666655421
Q ss_pred hHHHhhhccCCceeeecCCCCEEEEEEecCceeEe-cHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHH
Q 004211 79 DDVQKDLKLFPFETCESHDGGILIMLEYLGETHKF-TPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAY 157 (768)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l 157 (768)
..|+. +|.+ ..+ .+++++++++++++.. ..++ ...+|||||++|++.||+++
T Consensus 62 --------~~p~~-----~g~i----------~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~ 114 (344)
T 1jce_A 62 --------IRPMR-----DGVI----------ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAI 114 (344)
T ss_dssp --------ECCEE-----TTEE----------SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHH
T ss_pred --------EecCC-----CCee----------CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHH
Confidence 11221 2321 112 4677888887776542 1233 47899999999999999999
Q ss_pred HHHHHHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHH
Q 004211 158 LDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDE 237 (768)
Q Consensus 158 ~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~ 237 (768)
++|++.||++++.+++||+|||++|+... ..+..++|||+||||||++++.... ++. .++..+||++||+
T Consensus 115 ~~a~~~aG~~~~~li~ep~Aaa~~~~~~~-----~~~~~~lVvDiGggttdvsv~~~~~----~~~-~~~~~lGG~~id~ 184 (344)
T 1jce_A 115 LDAGLEAGASKVFLIEEPMAAAIGSNLNV-----EEPSGNMVVDIGGGTTEVAVISLGS----IVT-WESIRIAGDEMDE 184 (344)
T ss_dssp HHHHHHTTCSEEEEEEHHHHHHHHTTCCT-----TSSSCEEEEEECSSCEEEEEEETTE----EEE-EEEESCSHHHHHH
T ss_pred HHHHHHcCCCeEeccCCHHHHHHhcCCCC-----CCCceEEEEEeCCCeEEEEEEEcCC----EEe-eCCCCccChhHHH
Confidence 99999999999999999999999998643 3467899999999999999998752 222 3478899999999
Q ss_pred HHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCCe------eeEEEe--ccccCcceEEEecHHHHHHHHH
Q 004211 238 VLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAE------APLNIE--CLMNEKDVKGFIRREEFEKLSS 309 (768)
Q Consensus 238 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~------~~~~i~--~l~~~~d~~~~itr~~fe~~~~ 309 (768)
.|++++.+++. .++. ...||++|+.|+.... ..+.+. .+.++.++.+.|+|++|+++++
T Consensus 185 ~l~~~l~~~~~----~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~ 251 (344)
T 1jce_A 185 AIVQYVRETYR----VAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALR 251 (344)
T ss_dssp HHHHHHHHHHC----EECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTH
T ss_pred HHHHHHHHHhC----cccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHH
Confidence 99999987653 3322 3789999999987642 234443 3456667889999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCC--CCCc-CEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhhHhc
Q 004211 310 SLLERMRIPCQKALAGSGLN--VEKI-HSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLS 382 (768)
Q Consensus 310 ~~~~~i~~~i~~~l~~~~~~--~~~i-~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~ls 382 (768)
|+++++...|.++|+.++.. .+.+ +.|+|+||+|++|+|++.|++.|+.++....||++|||+||+++|+.++
T Consensus 252 ~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 252 SVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 99999999999999987532 1224 6899999999999999999999998888889999999999999998655
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=1.2e-32 Score=273.09 Aligned_cols=211 Identities=14% Similarity=0.267 Sum_probs=190.0
Q ss_pred EEeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCC
Q 004211 391 EVQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPF 466 (768)
Q Consensus 391 ~~~d~~~~~i~i~~~~~~~~~~~~~~l~~~~~~~p~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~ 466 (768)
++.|++|++|||++.+| .+.+|||||+++|++++.+|++..| +.|.+|+++ +....+|..||+|.|+|+
T Consensus 2 ~l~DV~p~slGie~~gg-----~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe--~~~~~dn~~Lg~f~l~gi 74 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGG-----VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGE--RKRAADNKSLGQFNLDGI 74 (219)
T ss_dssp CCCCBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESS--CSBGGGSEEEEEEEEECC
T ss_pred eEEEecCcEEEEEEeCC-----EEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcC--CcccccCCEEEEEEEeCC
Confidence 57899999999999987 8999999999999999999988554 777775543 333589999999999999
Q ss_pred CCCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeee
Q 004211 467 QTSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIP 546 (768)
Q Consensus 467 ~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~ 546 (768)
|+++.|.++|+|+|.+|.||+|+|++.+ +.++++..++
T Consensus 75 pp~p~G~~~IeVtf~iD~nGiL~V~a~d------------------------------------------~~tg~~~~i~ 112 (219)
T 4e81_A 75 NPAPRGMPQIEVTFDIDADGILHVSAKD------------------------------------------KNSGKEQKIT 112 (219)
T ss_dssp CCCSTTCSCEEEEEEECTTCCEEEEEEE------------------------------------------TTTCCEEEEE
T ss_pred CCCCCCCceEEEEEEeCCCCCEeeeeec------------------------------------------cccCccceEe
Confidence 9999999999999999999999999973 5567778888
Q ss_pred eecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHhhccCCHHHHHHHHHHHHHHHHHHh
Q 004211 547 VNENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIYRSFATESEREGISRNLRDTEEWLY 626 (768)
Q Consensus 547 i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~t~~e~~~l~~~l~~~~~WL~ 626 (768)
|+.. .+||+++++++++++.++..+|+..+++.++||.||+|||.+|+.|.+ +..++++++|+.|...++++++||+
T Consensus 113 I~~~--~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~~l~~-~~~~l~~~~k~~i~~~l~~~~~~L~ 189 (219)
T 4e81_A 113 IKAS--SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALK 189 (219)
T ss_dssp ECTT--CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred eecc--ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhCCHHHHHHHHHHHHHHHHHHh
Confidence 8875 369999999999999999999999999999999999999999999976 7889999999999999999999999
Q ss_pred hcCCCccHHHHHHHHHHHHHhHhHHHHhhHh
Q 004211 627 EDGDDESENVYAERLEDLKKLVDPIEGRYKD 657 (768)
Q Consensus 627 ~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 657 (768)
++ +.++|++++++|++++.||..|++.
T Consensus 190 ~~----~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 190 GE----DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp SS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred cC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 86 5889999999999999999999876
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=2.3e-31 Score=266.96 Aligned_cols=211 Identities=15% Similarity=0.265 Sum_probs=186.7
Q ss_pred eeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCCC
Q 004211 393 QDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQT 468 (768)
Q Consensus 393 ~d~~~~~i~i~~~~~~~~~~~~~~l~~~~~~~p~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~~ 468 (768)
.|++||+|||++.++ .+.+||++|+++|++++.+|++..+ +.|.++|++. ..+.+|..||+|.|+|+++
T Consensus 1 ~Dv~p~slGie~~~g-----~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~--~~~~~n~~Lg~f~l~gi~~ 73 (227)
T 1u00_A 1 MDVIPLSLGLETMGG-----LVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGER--ELVQDCRSLARFALRGIPA 73 (227)
T ss_dssp CCBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSS--SBGGGSEEEEEEEECCCCC
T ss_pred CCcccceEEEEEeCC-----EEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCC--ccCCCCCEEEEEEEeCCCC
Confidence 489999999999887 8999999999999999999997544 7888877643 2347899999999999999
Q ss_pred CCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeeee
Q 004211 469 SHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPVN 548 (768)
Q Consensus 469 ~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i~ 548 (768)
++.|.++|+|+|.+|.||+|+|++.+ +.++++..++|.
T Consensus 74 ~p~G~~~I~Vtf~iD~nGiL~V~a~d------------------------------------------~~tg~~~~i~i~ 111 (227)
T 1u00_A 74 LPAGGAHIRVTFQVDADGLLSVTAME------------------------------------------KSTGVEASIQVK 111 (227)
T ss_dssp CSTTCSCEEEEEEECTTCCEEEEEEE------------------------------------------TTTCCEEEEEEC
T ss_pred CCCCceEEEEEEEECCCCcEEEEeec------------------------------------------ccccccceEEEE
Confidence 99999999999999999999998863 334455677777
Q ss_pred cccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHhhccCCHHHHHHHHHHHHHHHHHHhhc
Q 004211 549 ENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIYRSFATESEREGISRNLRDTEEWLYED 628 (768)
Q Consensus 549 ~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~t~~e~~~l~~~l~~~~~WL~~~ 628 (768)
.. .+||.++++++++++.+|..+|+..+++.++||+||+|||++|+.|.+ +..++++++|+.|...|+++++|||++
T Consensus 112 ~~--~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l~~-~~~~~~~~~k~~i~~~l~~~~~wl~~~ 188 (227)
T 1u00_A 112 PS--YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAA-DAALLSAAERQVIDDAAAHLSEVAQGD 188 (227)
T ss_dssp CC--SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHTTSS
T ss_pred ec--cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 66 369999999999999999999999999999999999999999999976 778999999999999999999999954
Q ss_pred CCCccHHHHHHHHHHHHHhHhHHHHhhHhHH
Q 004211 629 GDDESENVYAERLEDLKKLVDPIEGRYKDEE 659 (768)
Q Consensus 629 g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~ 659 (768)
++++|++++++|++++.||..|+....
T Consensus 189 ----d~~~~~~~~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 189 ----DVDAIEQAIKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999876433
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=3.1e-28 Score=261.99 Aligned_cols=227 Identities=19% Similarity=0.193 Sum_probs=169.6
Q ss_pred ecHHHHHHHHHHHHHHHHHhhccCCCCeEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CCceeeccchH
Q 004211 113 FTPVQILGMLLSNLKQITEKNIKIPISNCV--IGVPCYLTDVQRRAYLDAATIA--------G------LKPLRLMHDCT 176 (768)
Q Consensus 113 ~~~eel~a~~L~~l~~~a~~~~~~~~~~~V--itVPa~~~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep~ 176 (768)
+..+...++++..|+..++...+.+ .++| |+||++|+..||+++++++..+ | +..+.+++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 3446667777777776543333333 5799 9999999999999999997765 4 35588999999
Q ss_pred HHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhccc--C
Q 004211 177 ATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDI--D 254 (768)
Q Consensus 177 Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~--~ 254 (768)
|||++| +.... ..+...+++|||+||||||++++++.++. .+.+..++..+||.+|++.|++++.+++ +. .
T Consensus 174 AAa~~~-l~~~~-~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~----g~~~~ 246 (346)
T 2fsj_A 174 GAALYL-LNQGI-IEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKET----GFVVP 246 (346)
T ss_dssp HHHHHH-HHHTS-SCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHH----CCCCC
T ss_pred HHHHHh-hcccc-ccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHh----CCCcC
Confidence 999988 22211 11234789999999999999999987776 4555456789999999999998877654 44 2
Q ss_pred ccCChHHHHHHHHHHHHHhhhcCCCCeeeEEEeccccCcceEEEecHHHH-HHHHHHHHHHHHHHHHHHHHhCCCCCCCc
Q 004211 255 VYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEF-EKLSSSLLERMRIPCQKALAGSGLNVEKI 333 (768)
Q Consensus 255 ~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~i~~l~~~~d~~~~itr~~f-e~~~~~~~~~i~~~i~~~l~~~~~~~~~i 333 (768)
+.. ..++ . ...+.+ .+. .++++++ +++++++++++...++++|+.+ .+++
T Consensus 247 i~~---------~~~e-------~--~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i 297 (346)
T 2fsj_A 247 FDL---------AQEA-------L--SHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRV 297 (346)
T ss_dssp HHH---------HHHH-------T--TSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGE
T ss_pred CCH---------HHHh-------c--CCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcc
Confidence 221 1222 0 112222 222 3569999 9999999999999999999876 4578
Q ss_pred CEEEEecCCCChHHHHHHHHhhcCCCCCC---cCCchhHHHhhHHHHhh
Q 004211 334 HSVELVGSGSRIPAISRMLNSLFNREPGR---TINASECVARGCALQCA 379 (768)
Q Consensus 334 ~~V~LvGG~srip~v~~~l~~~fg~~v~~---~~n~~eava~GAa~~a~ 379 (768)
+.|+|+||+|++ +++.|++.|+. +.. ..||++|+|+|+..++.
T Consensus 298 ~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 298 TSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 999999999999 99999999973 334 67999999999997764
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.94 E-value=6.1e-27 Score=256.37 Aligned_cols=317 Identities=17% Similarity=0.190 Sum_probs=205.7
Q ss_pred EEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChHHH
Q 004211 3 VVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDDVQ 82 (768)
Q Consensus 3 viGID~GTt~s~va~~~~g~~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~~~ 82 (768)
++|||+||++++++++.+|. +.+ +..|.+.+|+.+. ......++..+...+|+++++.-.
T Consensus 15 ~vgiDiGt~~i~~~~~~~~~-~~i--~~~g~~~~ps~~~------------~~g~i~d~~~~~~~ik~~~~~~~~----- 74 (377)
T 2ych_A 15 ALGLEIGASALKLVEVSGNP-PAL--KALASRPTPPGLL------------MEGMVAEPAALAQEIKELLLEART----- 74 (377)
T ss_dssp CEEEEECSSEEEEEEEETTT-TEE--EEEEEEECCTTSE------------ETTEESCHHHHHHHHHHHHHHHTC-----
T ss_pred eEEEEeCCCeEEEEEEeCCc-eEE--EEEEeEECCCCcc------------cCCCcCCHHHHHHHHHHHHHHcCC-----
Confidence 78999999999999987665 444 3334455565321 122345667788888888874100
Q ss_pred hhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHH---------
Q 004211 83 KDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQ--------- 153 (768)
Q Consensus 83 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~q--------- 153 (768)
..+.. .+..+.+.+..+.. . ...++.+++...+ +..++.+++.++.+++|.+|. .+.+
T Consensus 75 -~~~~v---~~~i~~~~~~~~~~-~--~~~v~~~el~~~i----~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~ 141 (377)
T 2ych_A 75 -RKRYV---VTALSNLAVILRPI-Q--VPKMPLKEMEEAV----RWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQV 141 (377)
T ss_dssp -CCCEE---EEEECGGGCEEEEE-E--EECCCHHHHHHHH----HHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEE
T ss_pred -CcceE---EEEecCCcEEEEEE-E--CCCCCHHHHHHHH----HHHHhhcCCCChhHceEEEEE--eCCCCCCCCccee
Confidence 00100 11112222221111 0 1357788876543 446777888899999999983 2222
Q ss_pred -----------HHHHHHHHHHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEE
Q 004211 154 -----------RRAYLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKIL 222 (768)
Q Consensus 154 -----------r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl 222 (768)
.+.+++|++.|||++..++.||+|||++|+..... ..+..++|||+||||||+++++. |.+ .
T Consensus 142 ~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~---~~~~~~~vvDiGggttdi~i~~~--g~~--~ 214 (377)
T 2ych_A 142 QVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAE---EPDRVFLVLDIGAESTSLVLLRG--DKP--L 214 (377)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHT---STTCEEEEEEECSSCEEEEEEET--TEE--E
T ss_pred EEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhccc---ccCCeEEEEEECCCcEEEEEEEC--CEE--E
Confidence 38899999999999999999999999998754321 34568999999999999999873 433 2
Q ss_pred EEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCCeeeEEEeccccCcceEEEecHH
Q 004211 223 SHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRRE 302 (768)
Q Consensus 223 ~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~i~~l~~~~d~~~~itr~ 302 (768)
. .++..+||.+||+.|++. ++.+ +.+||++|+.++............++-.+....++|+
T Consensus 215 ~-~~~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~ 274 (377)
T 2ych_A 215 A-VRVLTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPG 274 (377)
T ss_dssp E-EEEESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC-------------------------
T ss_pred E-EEeeechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHH
Confidence 2 346899999999999873 2332 3789999999875432111100001111234578999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC--CCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCc-----------------
Q 004211 303 EFEKLSSSLLERMRIPCQKALAGS--GLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRT----------------- 363 (768)
Q Consensus 303 ~fe~~~~~~~~~i~~~i~~~l~~~--~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~----------------- 363 (768)
+|++++++.++++...|++.|+.. +.....++.|+|+||+|++|.+++.+++.||.++...
T Consensus 275 ~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~~~~~~~~ 354 (377)
T 2ych_A 275 RIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFESEQ 354 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCTTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCcccCCHHH
Confidence 999999999999999999999863 5566679999999999999999999999998554322
Q ss_pred ---CCchhHHHhhHHHHhh
Q 004211 364 ---INASECVARGCALQCA 379 (768)
Q Consensus 364 ---~n~~eava~GAa~~a~ 379 (768)
.+|..++|.|+|+++.
T Consensus 355 l~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 355 LQEIGPEFAVALGLALRGV 373 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHhhhHHHHHHHHHHHcCC
Confidence 1344567778887664
No 15
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.94 E-value=1.1e-25 Score=234.80 Aligned_cols=202 Identities=22% Similarity=0.286 Sum_probs=173.3
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCceeeccchHHHHHHhhhcccCCCCCCCcE
Q 004211 117 QILGMLLSNLKQITEKNIKIPISNCVIGVPCYLTDVQRRAYLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTY 196 (768)
Q Consensus 117 el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~ 196 (768)
+....+|++++..++...+.....+++|+|++|+..+|+.+..+++.+|+++..++.||+|++++|+.. .
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~----------~ 140 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN----------D 140 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS----------S
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC----------C
Confidence 455778888888888777888889999999999999999999999999999999999999999988642 2
Q ss_pred EEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhc
Q 004211 197 VVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVL 276 (768)
Q Consensus 197 vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~L 276 (768)
.+|+|+|||||+++++. ++.+ + ......+||.+||+.|.+++. .+ ...|+++|+.+
T Consensus 141 ~~viDiGggst~~~~~~--~g~~--~-~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k~~~ 196 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIE--KGKI--T-ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIKKDF 196 (272)
T ss_dssp EEEEEECSSCEEEEEEE--TTEE--E-EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHHHSS
T ss_pred EEEEEECCCcEEEEEEE--CCEE--E-EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHHHhc
Confidence 59999999999999987 4433 2 345789999999999998763 11 26888999887
Q ss_pred CCCCeeeEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhc
Q 004211 277 SANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF 356 (768)
Q Consensus 277 s~~~~~~~~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f 356 (768)
+ ++++|++++.++++++...+.+.++..+ +++.|+|+||++++|++++.|++.|
T Consensus 197 ~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l 250 (272)
T 3h1q_A 197 S----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL 250 (272)
T ss_dssp T----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH
T ss_pred C----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh
Confidence 6 6899999999999999999999998764 4778999999999999999999999
Q ss_pred CCCCCCcCCchhHHHhhHHHHh
Q 004211 357 NREPGRTINASECVARGCALQC 378 (768)
Q Consensus 357 g~~v~~~~n~~eava~GAa~~a 378 (768)
+.++..+.||++++|+|||++|
T Consensus 251 ~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 251 GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SSCCBCCSSGGGHHHHHHHTTC
T ss_pred CCCccccCChHHHHHHHHHhcC
Confidence 9999999999999999999875
No 16
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.93 E-value=4.9e-26 Score=217.82 Aligned_cols=160 Identities=15% Similarity=0.297 Sum_probs=137.7
Q ss_pred cceEEeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEe
Q 004211 388 REFEVQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMI 463 (768)
Q Consensus 388 ~~~~~~d~~~~~i~i~~~~~~~~~~~~~~l~~~~~~~p~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i 463 (768)
..+.+.|++|++||++|.++ .+.+|||||+++|++++.+|++..| +.|.+|+++. ..+.+|..||+|.|
T Consensus 18 ~~f~l~DV~P~slGie~~gg-----~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~--~~~~dn~~LG~f~l 90 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLGG-----VFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGER--EMAGDNKLLGQFTL 90 (182)
T ss_dssp ------CBCSSCEEEECTTS-----BEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSC--SBGGGSEEEEEEEE
T ss_pred CCEEEEEecCCEEEEEEeCC-----EEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCc--cccccCceEEEEEE
Confidence 36889999999999999987 7999999999999999999988655 7788855433 23478999999999
Q ss_pred cCCCCCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceee
Q 004211 464 GPFQTSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRL 543 (768)
Q Consensus 464 ~~~~~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 543 (768)
+|+++++.|.++|+|+|++|.||+|+|++.+ +.++++.
T Consensus 91 ~gipp~p~G~~~IeVtf~iD~nGiL~VsA~d------------------------------------------~~tg~~~ 128 (182)
T 3n8e_A 91 IGIPPAPRGVPQIEVTFDIDANGIVHVSAKD------------------------------------------KGTGREQ 128 (182)
T ss_dssp CCCCCCCTTCSCEEEEEEECTTCCEEEEEEE------------------------------------------TTTCCEE
T ss_pred cCCCCCCCCCeeEEEEEEEecCCEEEEEEEE------------------------------------------cCCCCEe
Confidence 9999999999999999999999999999863 5567777
Q ss_pred eeeeecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHH
Q 004211 544 EIPVNENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKI 598 (768)
Q Consensus 544 ~i~i~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l 598 (768)
.++|+.. .+||+++++++++++.++..+|+..+++.++||+||+|||.+|+.|
T Consensus 129 ~i~I~~~--~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy~~~~~l 181 (182)
T 3n8e_A 129 QIVIQSS--GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKM 181 (182)
T ss_dssp EEEESCC--CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHCCSCCC
T ss_pred eEEEecC--ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8888876 5799999999999999999999999999999999999999998765
No 17
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.92 E-value=5.8e-25 Score=243.78 Aligned_cols=227 Identities=12% Similarity=0.053 Sum_probs=164.9
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHH-HHcCCCceeeccchHHHHHH-hhhcccCCCCCCCcEEEEEEeCCceEEEEEEEee
Q 004211 138 ISNCVIGVPCYLTDVQRRAYLDAA-TIAGLKPLRLMHDCTATALG-YGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYE 215 (768)
Q Consensus 138 ~~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~-y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~ 215 (768)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |.. ..++.... +.+|||+||||||++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~--~~~~~~~~-~glVvDiG~gtt~v~~v~-- 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTS--RQVGERTL-TGTVIDSGDGVTHVIPVA-- 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGS--TTCCSCCC-CEEEEEESSSCEEEEEEE--
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcc--cccCCCCC-eEEEEEcCCCceEEEEeE--
Confidence 457999999999999999999999 88999999999999999977 421 11111223 679999999999999985
Q ss_pred CCeEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCC---------------
Q 004211 216 NGHMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANA--------------- 280 (768)
Q Consensus 216 ~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~--------------- 280 (768)
+|.. +.....+..+||++||+.|.+++..++. ...... -...++++|+.++...
T Consensus 182 ~G~~-~~~~~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~ 250 (418)
T 1k8k_A 182 EGYV-IGSCIKHIPIAGRDITYFIQQLLRDREV---GIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGS 250 (418)
T ss_dssp TTEE-CGGGCEEESCSHHHHHHHHHHHHHTTCC---CCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGG
T ss_pred CCEE-cccceEEEeCcHHHHHHHHHHHHHhcCC---CCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhccccc
Confidence 4432 3332346789999999999999976431 121111 1256788888875432
Q ss_pred --eeeEEEeccccCcceEEEecHHHH---HHHHHHH------HHHHHHHHHHHHHhCC--CCCCCcCEEEEecCCCChHH
Q 004211 281 --EAPLNIECLMNEKDVKGFIRREEF---EKLSSSL------LERMRIPCQKALAGSG--LNVEKIHSVELVGSGSRIPA 347 (768)
Q Consensus 281 --~~~~~i~~l~~~~d~~~~itr~~f---e~~~~~~------~~~i~~~i~~~l~~~~--~~~~~i~~V~LvGG~srip~ 347 (768)
...+.++....+....+.+++++| |.+++|. +..+...|.++|..+. +....++.|+|+||+|++|.
T Consensus 251 ~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg 330 (418)
T 1k8k_A 251 KWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRD 330 (418)
T ss_dssp GTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTT
T ss_pred ccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCcccccc
Confidence 124555554445566889999999 4554443 2568888999998864 34455788999999999999
Q ss_pred HHHHHHhhcCC------------------------CCCCcCCchhHHHhhHHHHhhH
Q 004211 348 ISRMLNSLFNR------------------------EPGRTINASECVARGCALQCAM 380 (768)
Q Consensus 348 v~~~l~~~fg~------------------------~v~~~~n~~eava~GAa~~a~~ 380 (768)
+++.|++.++. .+..+.++..++.+||+++|..
T Consensus 331 ~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 331 FGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 99998876631 1223457789999999999873
No 18
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.91 E-value=3.3e-24 Score=235.49 Aligned_cols=199 Identities=16% Similarity=0.101 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCc
Q 004211 152 VQRRAYLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLG 231 (768)
Q Consensus 152 ~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lG 231 (768)
..-+.+.+|++.|||++..++.||+|||++|.... .....+++||+||||||++++. +|.+.. .++..+|
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~-----~~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~G 237 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP-----EKDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVG 237 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH-----HHHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCC
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc-----cccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccH
Confidence 45678999999999999999999999999886432 2346799999999999999987 455432 2367999
Q ss_pred hhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCC-----CeeeEEEeccccCcceEEEecHHHHHH
Q 004211 232 GRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSAN-----AEAPLNIECLMNEKDVKGFIRREEFEK 306 (768)
Q Consensus 232 G~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~-----~~~~~~i~~l~~~~d~~~~itr~~fe~ 306 (768)
|++||+.|+..+. . .+.+||++|+.++.. .+..+.++.+. ......++|++|.+
T Consensus 238 G~~it~dIa~~l~--------~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~l~~ 296 (419)
T 4a2a_A 238 MKHVIKDVSAVLD--------T-----------SFEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKKLSV 296 (419)
T ss_dssp HHHHHHHHHHHHT--------C-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHC--------C-----------CHHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEEcHHHHHH
Confidence 9999999987542 1 138899999998642 34467777653 24667999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCC------CCCCcCEEEEecCCCChHHHHHHHHhhcCCCCC--C---------------c
Q 004211 307 LSSSLLERMRIPCQKALAGSGL------NVEKIHSVELVGSGSRIPAISRMLNSLFNREPG--R---------------T 363 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~------~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~--~---------------~ 363 (768)
+++|.++++...+++.|+.++. ....++.|+|+||+|++|.|++.+++.||.++. . .
T Consensus 297 ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~~~ 376 (419)
T 4a2a_A 297 IIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADEVA 376 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCccccc
Confidence 9999999999999999999987 345689999999999999999999999986542 2 1
Q ss_pred CCchhHHHhhHHHHhhHh
Q 004211 364 INASECVARGCALQCAML 381 (768)
Q Consensus 364 ~n~~eava~GAa~~a~~l 381 (768)
.+|..++|.|.+++++..
T Consensus 377 ~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 377 NDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp TCGGGHHHHHTTCC----
T ss_pred CCchHHHHHHHHHHHhhc
Confidence 488999999999887643
No 19
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.91 E-value=6.8e-25 Score=239.33 Aligned_cols=305 Identities=12% Similarity=0.122 Sum_probs=192.9
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceE-EEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCChH
Q 004211 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPT-VVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFREDD 80 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~~~~ii~n~~~~r~~Ps-~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~~ 80 (768)
..|+||+||+++++++...+.|.-++.+-.|....++ .+.+.....++|++|.... .. ..
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~~------------- 66 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--LT------------- 66 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----TS--EE-------------
T ss_pred ceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcC----cc--cc-------------
Confidence 5799999999999999776665444433322222221 1122223457888885430 00 00
Q ss_pred HHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccCC--CCeEEEEeCCCCCHHHHHHHH
Q 004211 81 VQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKIP--ISNCVIGVPCYLTDVQRRAYL 158 (768)
Q Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~--~~~~VitVPa~~~~~qr~~l~ 158 (768)
-..|+. +|.+ ..+. ....+++|+.. +.++.. ...++||+|++++..+|+++.
T Consensus 67 -----~~~Pi~-----~G~i----------~d~d---~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~ 120 (375)
T 2fxu_A 67 -----LKYPIE-----HGII----------TNWD---DMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMT 120 (375)
T ss_dssp -----EECSEE-----TTEE----------CCHH---HHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHH
T ss_pred -----eecccc-----CCcc----------cCHH---HHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHHH
Confidence 011211 3321 1121 23334444432 223322 346999999999999999888
Q ss_pred HHH-HHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHH
Q 004211 159 DAA-TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDE 237 (768)
Q Consensus 159 ~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~ 237 (768)
+++ +.+|++.+.+++||+|||++|+. ...+|||+|+|||+++.+. +|.. +........+||++||+
T Consensus 121 e~~fe~~g~~~~~~~~e~~aaa~a~g~----------~~~lVvDiG~gtt~v~~v~--~G~~-~~~~~~~~~~GG~~lt~ 187 (375)
T 2fxu_A 121 QIMFETFNVPAMYVAIQAVLSLYASGR----------TTGIVLDSGDGVTHNVPIY--EGYA-LPHAIMRLDLAGRDLTD 187 (375)
T ss_dssp HHHHHTTCCSEEEEEEHHHHHHHHTTC----------SSEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHH
T ss_pred HHHHHhcCcceEEEccchheeeeecCC----------CeEEEEEcCCCceEEeEeE--CCEE-eccceEEeccCHHHHHH
Confidence 765 88899999999999999998874 3589999999999987764 5532 33223457899999999
Q ss_pred HHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCC----------------CCeeeEEEeccccCcceEEEecH
Q 004211 238 VLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSA----------------NAEAPLNIECLMNEKDVKGFIRR 301 (768)
Q Consensus 238 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~----------------~~~~~~~i~~l~~~~d~~~~itr 301 (768)
.|.+++..+. +...... =...++++|+.++. .....+.++ ++ ..+.+++
T Consensus 188 ~l~~~l~~~~---~~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg--~~i~i~~ 252 (375)
T 2fxu_A 188 YLMKILTERG---YSFVTTA-------EREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DG--QVITIGN 252 (375)
T ss_dssp HHHHHHHHHT---CCCCSHH-------HHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TS--CEEEEST
T ss_pred HHHHHHHhcC---CCCCcHH-------HHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CC--CEEEECh
Confidence 9999998651 2211100 11445555655432 112223332 22 2467888
Q ss_pred HHHH---HHHHHH-----HHHHHHHHHHHHHhCC--CCCCCcCEEEEecCCCChHHHHHHHHhhcC--------CCCCCc
Q 004211 302 EEFE---KLSSSL-----LERMRIPCQKALAGSG--LNVEKIHSVELVGSGSRIPAISRMLNSLFN--------REPGRT 363 (768)
Q Consensus 302 ~~fe---~~~~~~-----~~~i~~~i~~~l~~~~--~~~~~i~~V~LvGG~srip~v~~~l~~~fg--------~~v~~~ 363 (768)
+.|. .+++|. ...+.+.|.++|.++. +....++.|+|+||+|++|.++++|++.++ .++..+
T Consensus 253 erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~ 332 (375)
T 2fxu_A 253 ERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332 (375)
T ss_dssp HHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECC
T ss_pred hheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcC
Confidence 8873 333432 2457788888888653 223345789999999999999999998875 233456
Q ss_pred CCchhHHHhhHHHHhh
Q 004211 364 INASECVARGCALQCA 379 (768)
Q Consensus 364 ~n~~eava~GAa~~a~ 379 (768)
.+|+.++++||+++|.
T Consensus 333 ~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 333 PERKYSVWIGGSILAS 348 (375)
T ss_dssp TTTTSHHHHHHHHHHH
T ss_pred CCCCccEEcchHHhhC
Confidence 7999999999999997
No 20
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.89 E-value=1.3e-22 Score=189.37 Aligned_cols=147 Identities=16% Similarity=0.316 Sum_probs=130.1
Q ss_pred EeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCC
Q 004211 392 VQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQ 467 (768)
Q Consensus 392 ~~d~~~~~i~i~~~~~~~~~~~~~~l~~~~~~~p~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~ 467 (768)
+.|++||+||++|.++ .+.+|||||+++|++++.+|++..| +.|.+|+++. . .+.+|..||+|.|.|++
T Consensus 2 ~~Dv~p~slGi~~~gg-----~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~-~-~~~dn~~LG~f~l~gip 74 (152)
T 3h0x_A 2 NADVNALTLGIETTGG-----VMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGER-A-MSKDNNLLGKFELTGIP 74 (152)
T ss_dssp -CCBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSC-S-BGGGSEEEEEEEECCCC
T ss_pred ccceeccEEEEEEcCC-----EEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCc-c-ccccCcEEEEEEEeCCC
Confidence 5799999999999987 8999999999999999999998654 6788855433 2 35889999999999999
Q ss_pred CCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeee
Q 004211 468 TSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPV 547 (768)
Q Consensus 468 ~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i 547 (768)
+++.|.++|+|+|++|.||+|+|++.+ +.++++..++|
T Consensus 75 p~p~G~~~I~Vtf~iD~nGiL~V~a~d------------------------------------------~~tg~~~~i~I 112 (152)
T 3h0x_A 75 PAPRGVPQIEVTFALDANGILKVSATD------------------------------------------KGTGKSESITI 112 (152)
T ss_dssp CCCTTCSCEEEEEEECTTSEEEEEEEE------------------------------------------TTTCCEEEEEE
T ss_pred CCCCCCceEEEEEEEcCCCEEEEEEEE------------------------------------------cCCCcEeEEEE
Confidence 999999999999999999999999973 55677788898
Q ss_pred ecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHH
Q 004211 548 NENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALE 588 (768)
Q Consensus 548 ~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LE 588 (768)
.... ++||+++++++++++.+|..+|+..+++.++||+||
T Consensus 113 ~~~~-~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 113 TNDK-GRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp ECCT-TCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred ecCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 8765 579999999999999999999999999999999987
No 21
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.88 E-value=1.6e-22 Score=188.35 Aligned_cols=147 Identities=16% Similarity=0.314 Sum_probs=126.1
Q ss_pred EeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCC
Q 004211 392 VQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQ 467 (768)
Q Consensus 392 ~~d~~~~~i~i~~~~~~~~~~~~~~l~~~~~~~p~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~ 467 (768)
+.|++||+||++|.++ .+.+||+||+++|++++.+|++..| +.|.+|+++ +..+.+|..||+|.|.|++
T Consensus 2 ~~Dv~p~slGie~~gg-----~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe--~~~~~dn~~LG~f~l~gip 74 (152)
T 3dob_A 2 NADVAPLSLGIETAGG-----VMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGE--RAMTRDNHRLGTFELSGIP 74 (152)
T ss_dssp --CBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESS--CSBGGGSEEEEEEEEECCC
T ss_pred ceeeecceEEEEEcCC-----EEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcC--ccccccCceeEEEEEeCCC
Confidence 5799999999999987 8999999999999999999998655 567775443 2335899999999999999
Q ss_pred CCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeee
Q 004211 468 TSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPV 547 (768)
Q Consensus 468 ~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i 547 (768)
+++.|.++|+|+|++|.||+|+|++.+ +.++++..++|
T Consensus 75 p~p~G~~~IeVtf~iD~nGiL~Vsa~d------------------------------------------~~tg~~~~i~I 112 (152)
T 3dob_A 75 PAPRGVPQIEVTFNIDANGILNVSAED------------------------------------------KSTGKSNRITI 112 (152)
T ss_dssp CCCTTCCCEEEEEEECTTCCEEEEEEE------------------------------------------TTTCCEEEEEE
T ss_pred CCCCCCceEEEEEEeCCCCeEEEEEEE------------------------------------------cCCCCEEEEEE
Confidence 999999999999999999999999963 55677788888
Q ss_pred ecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHH
Q 004211 548 NENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALE 588 (768)
Q Consensus 548 ~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LE 588 (768)
+... +.||++++++++++.+++..+|++.+++.++||+||
T Consensus 113 ~~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 113 QNEK-GRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CCC-----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred EcCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 8765 569999999999999999999999999999999986
No 22
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.88 E-value=6.7e-23 Score=218.67 Aligned_cols=226 Identities=11% Similarity=0.053 Sum_probs=150.8
Q ss_pred EecHHHHHHHHHHHHHHHHHhhccCCCCeEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCCceeeccc
Q 004211 112 KFTPVQILGMLLSNLKQITEKNIKIPISNCVIGVPCY-LTDV--QR--RAYLDA------------ATIAGLKPLRLMHD 174 (768)
Q Consensus 112 ~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~-~~~~--qr--~~l~~A------------a~~AGl~~~~li~E 174 (768)
.+++..+++.+ ..|+. +. ..+.+ ..+|+++|.. |... || .++.+- ++.+++..+.++.|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~-~~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SG-LPVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HS-CCSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cC-CCCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 46777777654 44543 21 11222 4699999987 6531 21 222211 23345677899999
Q ss_pred hHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccC
Q 004211 175 CTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDID 254 (768)
Q Consensus 175 p~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~ 254 (768)
|.||+++|+... ..+..++|+|+||||||+++++ ++.+.+.++.++..+||.+||+.|++++.++ +.+
T Consensus 149 ~~aa~~~~~~~~-----~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~ 216 (320)
T 2zgy_A 149 SIPAGYEVLQEL-----DELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTK 216 (320)
T ss_dssp SHHHHHHHHHHS-----CTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBG
T ss_pred cHHHHHhhhccc-----cCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCC
Confidence 999999886322 3467899999999999999997 4455566666788999999999999888631 333
Q ss_pred ccCChHHHHHHHHHHHHH-hhhcCCCCeeeEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc
Q 004211 255 VYTNVKASIRLRASCEKL-KKVLSANAEAPLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQKALAGSGLNVEKI 333 (768)
Q Consensus 255 ~~~~~~~~~rL~~~ae~~-K~~Ls~~~~~~~~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i 333 (768)
+.. ..++++ |..- ... ..... .+. .-.++++.+++++.++++...|.+.+++. .++
T Consensus 217 i~~---------~~ae~~lk~~~---~~~--~~~~~---i~~--~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~ 273 (320)
T 2zgy_A 217 GSS---------YLADDIIIHRK---DNN--YLKQR---IND--ENKISIVTEAMNEALRKLEQRVLNTLNEF----SGY 273 (320)
T ss_dssp GGH---------HHHHHHHHTTT---CHH--HHHHH---SSS--SCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCC
T ss_pred CCH---------HHHHHHHHHhh---hhh--cccce---ecC--chhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCC
Confidence 321 334444 3320 000 00000 000 11345666677777777777777776652 478
Q ss_pred CEEEEecCCCChHHHHHHHHhhcCC---CCCCcCCchhHHHhhHHHHh
Q 004211 334 HSVELVGSGSRIPAISRMLNSLFNR---EPGRTINASECVARGCALQC 378 (768)
Q Consensus 334 ~~V~LvGG~srip~v~~~l~~~fg~---~v~~~~n~~eava~GAa~~a 378 (768)
+.|+|+||+|++ +++.|++.|+. ++....||++|+|+||+++|
T Consensus 274 ~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 274 THVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 999999999998 99999999986 57788999999999999875
No 23
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.88 E-value=2.1e-22 Score=187.25 Aligned_cols=146 Identities=18% Similarity=0.327 Sum_probs=128.2
Q ss_pred EeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCC
Q 004211 392 VQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQ 467 (768)
Q Consensus 392 ~~d~~~~~i~i~~~~~~~~~~~~~~l~~~~~~~p~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~ 467 (768)
+.|++||+||++|.++ .+.+|||||+++|++++.+|++..| +.|.+|+++ .. .+.+|..||+|.|.|++
T Consensus 2 ~~DV~p~slGie~~gg-----~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe-~~-~~~dn~~LG~f~l~gip 74 (151)
T 3dqg_A 2 NADVTPLSLGIETLGG-----IMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGE-RE-MATSNKLLGQFSLVGIP 74 (151)
T ss_dssp --CBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESS-CS-BGGGSEEEEEEEEECCC
T ss_pred cceeeeeEEEEEEcCC-----EEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcC-Cc-ccccCcEEEEEEEeCCC
Confidence 5799999999999987 8999999999999999999998654 777775543 23 35899999999999999
Q ss_pred CCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeee
Q 004211 468 TSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPV 547 (768)
Q Consensus 468 ~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i 547 (768)
+++.|.++|+|+|++|.||+|+|++.+ +.++++..+.|
T Consensus 75 p~p~G~~~IeVtf~iD~nGiL~Vsa~d------------------------------------------~~tg~~~~i~I 112 (151)
T 3dqg_A 75 PAPRGVPQVEVTFDIDANGIVNVSARD------------------------------------------RGTGKEQQIVI 112 (151)
T ss_dssp CCCTTCSCEEEEEEECTTSEEEEEEEE------------------------------------------TTTCCEEEEEE
T ss_pred CCCCCCcEEEEEEEeccCcEEEEEEEE------------------------------------------ccCCCEeEEEE
Confidence 999999999999999999999999963 55677788888
Q ss_pred ecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHH
Q 004211 548 NENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALE 588 (768)
Q Consensus 548 ~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LE 588 (768)
+.. .+||++++++++++.+++..+|+..+++.++||+||
T Consensus 113 ~~~--~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 113 QSS--GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp ECS--SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred ecC--CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 876 479999999999999999999999999999999986
No 24
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.86 E-value=2.6e-21 Score=181.77 Aligned_cols=147 Identities=11% Similarity=0.282 Sum_probs=128.4
Q ss_pred EeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEEecCCC
Q 004211 392 VQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFMIGPFQ 467 (768)
Q Consensus 392 ~~d~~~~~i~i~~~~~~~~~~~~~~l~~~~~~~p~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~i~~~~ 467 (768)
+.|++||+||+++.++ .+.+||++|+++|++++.+|++..+ +.|.++|++. ..+.+|..||+|.|.|++
T Consensus 2 v~Dv~p~slGi~~~~g-----~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~--~~~~~n~~lg~~~l~gip 74 (152)
T 2op6_A 2 NADVNPLTLGIETVGG-----VMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGER--PMVMDNHKLGNFDVTGIP 74 (152)
T ss_dssp -CCBCSSCEEEEETTT-----EEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSC--SBGGGSEEEEEEEECCCC
T ss_pred ceEeecccEEEEEeCC-----EEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCC--ccCccCCEeEEEEEECCC
Confidence 5799999999999887 8999999999999999999998655 8888887643 234789999999999999
Q ss_pred CCCCCcceEEEEEEEcCCccEEEEeeeeeeeeeecccccccccccccccccccCCCCCCCCCCcccccccccceeeeeee
Q 004211 468 TSHAETARVKVRVHLDLDGVVRVQSASLIEEFVDDSVRRESRDAHLTLEEDAKSDHTPATAIDPEINRKGKVLKRLEIPV 547 (768)
Q Consensus 468 ~~~~~~~~i~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~i~i 547 (768)
+++.|.++|+|+|.+|.||+|+|++.+ +.++++..++|
T Consensus 75 p~p~G~~~I~V~f~id~nGiL~V~a~d------------------------------------------~~tg~~~~i~i 112 (152)
T 2op6_A 75 PAPRGVPQIEVTFEIDVNGILHVSAED------------------------------------------KGTGNKNKLTI 112 (152)
T ss_dssp CCCTTCSCEEEEEEECTTSCEEEEEEE------------------------------------------TTTCCEEEEEE
T ss_pred CCCCCCceEEEEEEECCCcEEEEEEEE------------------------------------------ecCCcEEEEEe
Confidence 999999999999999999999999863 33455667788
Q ss_pred ecccCCCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHH
Q 004211 548 NENVNGGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALE 588 (768)
Q Consensus 548 ~~~~~~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LE 588 (768)
.... ++||.++++++++++.+|..+|+..+++.++||+||
T Consensus 113 ~~~~-~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 113 TNDH-NRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CSSS-SCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eccc-cCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 7664 579999999999999999999999999999999986
No 25
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.79 E-value=7e-18 Score=175.93 Aligned_cols=184 Identities=16% Similarity=0.136 Sum_probs=126.1
Q ss_pred HcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHH
Q 004211 163 IAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSY 242 (768)
Q Consensus 163 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~ 242 (768)
.++...+..|+|++|+++++.... +....|+|+|||+++++++. .+|.+.+...++++..||.+|+..++++
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~-------~~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~ 139 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFII-------PETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKI 139 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHS-------TTCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHH
T ss_pred HHhhCCCcccchHHHHHHHHHHhC-------CCCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHH
Confidence 367778899999999998876543 23457899999999999884 5678888888999999999999999988
Q ss_pred HHHHHhhhcccCccCChHHHHHHHHHHHHHhhh--cCCCCeeeE--E-EeccccCcceEEEecHHHHHHHHHHHHHHHHH
Q 004211 243 FAAQFKQQYDIDVYTNVKASIRLRASCEKLKKV--LSANAEAPL--N-IECLMNEKDVKGFIRREEFEKLSSSLLERMRI 317 (768)
Q Consensus 243 l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~--Ls~~~~~~~--~-i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~ 317 (768)
+.-.|.....+ +..++.. ++.....-. . +..+.++ ...++++..+.+.+..
T Consensus 140 l~~~~~~~~~~---------------~~~a~~~~~i~~~~~~f~~s~~~~~~~~~---------~~~~di~a~~~~~v~~ 195 (276)
T 4ehu_A 140 IEVDVSELGSI---------------SMNSQNEVSISSTCTVFAESEVISHLSEN---------AKIEDIVAGIHTSVAK 195 (276)
T ss_dssp HTCCGGGHHHH---------------HTTCSSCCCCCCCSHHHHHHHHHHHHHTT---------CCHHHHHHHHHHHHHH
T ss_pred hccChhhhHHH---------------HhcCCCCCCcCCccchhhhhHHHHhhhcc---------ccHHHHHHHHHHHHHH
Confidence 85443321110 0011100 110000000 0 0000011 1124566666666665
Q ss_pred HHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhhHhc
Q 004211 318 PCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLS 382 (768)
Q Consensus 318 ~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~ls 382 (768)
.+.....+. ..++.|+|+||.+++|.|++.+++.||.++..+.||++++|+|||++|....
T Consensus 196 ~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 196 RVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 555544443 2567899999999999999999999999999999999999999999997544
No 26
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.77 E-value=3.3e-20 Score=203.34 Aligned_cols=213 Identities=14% Similarity=0.154 Sum_probs=90.4
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCC
Q 004211 139 SNCVIGVPCYLTDVQRRAYLDAA-TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENG 217 (768)
Q Consensus 139 ~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~ 217 (768)
..++||+|++++..+|+++.+++ +.+|++.+.++++|+|||++++. ...+|+|+|+|+|+++.+. +|
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~----------~~~lVVDiG~g~T~v~pv~--~G 172 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL----------LTGVVVDSGDGVTHICPVY--EG 172 (394)
T ss_dssp -----------------------------------------------------------CCEEEECSSCEEEECEE--TT
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC----------ceEEEEEcCCCceEeeeeE--CC
Confidence 45999999999999999888865 88899999999999999988764 3569999999999998774 34
Q ss_pred eEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCC----------------e
Q 004211 218 HMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANA----------------E 281 (768)
Q Consensus 218 ~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~----------------~ 281 (768)
.+ +........+||+++|..|.+++..+ .+........ ..++++|+.++.-. .
T Consensus 173 ~~-~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 173 FS-LPHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp EE-CSTTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred EE-cccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 33 22112246899999999999999754 1222111111 45666666654321 1
Q ss_pred eeEEEeccccCcceEEEecHHHHH---HHHHHH-----HHHHHHHHHHHHHhCCC--CCCCcCEEEEecCCCChHHHHHH
Q 004211 282 APLNIECLMNEKDVKGFIRREEFE---KLSSSL-----LERMRIPCQKALAGSGL--NVEKIHSVELVGSGSRIPAISRM 351 (768)
Q Consensus 282 ~~~~i~~l~~~~d~~~~itr~~fe---~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~V~LvGG~srip~v~~~ 351 (768)
..+.++ ++ ..+.|+++.|. .+++|. ...+.+.|.+.|.++.. ...-++.|+|+||+|.+|.+.++
T Consensus 242 ~~~~lp---dg--~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~r 316 (394)
T 1k8k_B 242 ESYTLP---DG--RIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSR 316 (394)
T ss_dssp EEEECT---TS--CEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHH
T ss_pred eEEECC---CC--CEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHH
Confidence 112221 22 24677888773 223331 23467778888887642 22234789999999999999999
Q ss_pred HHhhcCC-----------------CC--CCcCCchhHHHhhHHHHhh
Q 004211 352 LNSLFNR-----------------EP--GRTINASECVARGCALQCA 379 (768)
Q Consensus 352 l~~~fg~-----------------~v--~~~~n~~eava~GAa~~a~ 379 (768)
|++.++. ++ ..+.++..++.+|++++|.
T Consensus 317 l~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 317 LERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 8877742 22 2255778999999999886
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.70 E-value=3.5e-17 Score=175.81 Aligned_cols=208 Identities=15% Similarity=0.164 Sum_probs=141.5
Q ss_pred CeEEEEeCCCCCHHHH-HHHHHHHHHcCC------------CceeeccchHHHHHHhhhcccCCCCC---CCcEEEEEEe
Q 004211 139 SNCVIGVPCYLTDVQR-RAYLDAATIAGL------------KPLRLMHDCTATALGYGIYKTDFSNV---GPTYVVFVDI 202 (768)
Q Consensus 139 ~~~VitVPa~~~~~qr-~~l~~Aa~~AGl------------~~~~li~Ep~Aaal~y~~~~~~~~~~---~~~~vlv~D~ 202 (768)
..+++++|..+...+| +++++++...+- ..+.++.||.||+++|+.... +.. .+..++|+|+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~--~~~~~~~~~~~~vvDi 191 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENG--KVFKAFTEGKYSVLDF 191 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETT--EECHHHHTCEEEEEEE
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccC--ccccccccCcEEEEEe
Confidence 4789999999988887 589998875542 467899999999999876431 101 4678999999
Q ss_pred CCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCCee
Q 004211 203 GHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEA 282 (768)
Q Consensus 203 GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~ 282 (768)
||||||++++. ++.+ +...++...+||..+++.|.+++.+++. +..+. . ...++.+.
T Consensus 192 GggTtd~~v~~--~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~-------- 248 (355)
T 3js6_A 192 GSGTTIIDTYQ--NMKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE-------- 248 (355)
T ss_dssp CSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC--------
T ss_pred CCCcEEEEEEc--CCEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc--------
Confidence 99999999983 4433 2112334679999999999999876532 22221 1 11111111
Q ss_pred eEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHH--HHHHHHhhcCCCC
Q 004211 283 PLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPA--ISRMLNSLFNREP 360 (768)
Q Consensus 283 ~~~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~--v~~~l~~~fg~~v 360 (768)
+.... .+..-...+ .+.+++.+++++++|...|++.+.+ ++.++.|+|+||++.++. +++.|++.|+..
T Consensus 249 -~~~~~--~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~- 319 (355)
T 3js6_A 249 -YKQCK--LNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA- 319 (355)
T ss_dssp ----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-
T ss_pred -ccccc--ccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC-
Confidence 00000 000000112 3456777888888888888888764 356899999999999998 999999998642
Q ss_pred CCcCCchhHHHhhHHHHhhHhcC
Q 004211 361 GRTINASECVARGCALQCAMLSP 383 (768)
Q Consensus 361 ~~~~n~~eava~GAa~~a~~ls~ 383 (768)
.||..|+|.|+..++..+..
T Consensus 320 ---~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 ---DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp ---SSGGGHHHHHHHHHHHHHHH
T ss_pred ---CCcHHHHHHHHHHHHHHHHh
Confidence 89999999999999887653
No 28
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.59 E-value=3.8e-15 Score=135.80 Aligned_cols=101 Identities=15% Similarity=0.320 Sum_probs=83.9
Q ss_pred ccceEEeeccceeeEEEecCCCcccceeEEEecCCCCCCceeEEEEeecCc----eEEEEEEeccccCCCCCCCcceeEE
Q 004211 387 VREFEVQDSFPFSIGFSSEKGPICTFSNGVLLPKGQPFPSVKILTLHRSNG----FQLQAFYADQNELPSVVSPQISSFM 462 (768)
Q Consensus 387 ~~~~~~~d~~~~~i~i~~~~~~~~~~~~~~l~~~~~~~p~~k~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~i~~~~ 462 (768)
++++.+.|++|++||+++.++ .+.+||+||+++|++++.+|++..| +.|.++|++. ..+.+|..||+|.
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g-----~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~--~~~~~n~~Lg~f~ 86 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGG-----VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGER--KRAADNKSLGQFN 86 (135)
T ss_dssp -------CCCSSCCCEEETTT-----EECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCS--SSCSSSEEEEEEE
T ss_pred eCcEEEEEeecCcEEEEEECC-----EEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCC--cccccCcEEEEEE
Confidence 468899999999999999887 8999999999999999999987543 8888887643 3347899999999
Q ss_pred ecCCCCCCCCcceEEEEEEEcCCccEEEEeee
Q 004211 463 IGPFQTSHAETARVKVRVHLDLDGVVRVQSAS 494 (768)
Q Consensus 463 i~~~~~~~~~~~~i~v~~~~d~~Gil~v~~~~ 494 (768)
+.++++++.|.++|+|+|++|.||+|+|++.+
T Consensus 87 l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d 118 (135)
T 1q5l_A 87 LDGINPAPRGMPQIEVTFDIDADGILHVSAKD 118 (135)
T ss_dssp CCCCCSCCSSSCCEEEEEEECTTSEEEEEEEE
T ss_pred EeCCCCCCCceeEEEEEEEECCCCEEEEEEEE
Confidence 99999999999999999999999999999863
No 29
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.59 E-value=3.8e-16 Score=166.42 Aligned_cols=204 Identities=12% Similarity=0.119 Sum_probs=143.6
Q ss_pred CeEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEe
Q 004211 139 SNCVIGVPCYLTD--VQRRAYLDAATIA--------G------LKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDI 202 (768)
Q Consensus 139 ~~~VitVPa~~~~--~qr~~l~~Aa~~A--------G------l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~ 202 (768)
..+++++|..+.. .+|+.+++....- | +..+.++.|+.+|.+.+. . ..+...++|+|+
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~---~~~~~~v~vvDi 179 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---E---NFKNKNVAVIDF 179 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---C---CCTTCEEEEEEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---h---hhccCCEEEEEe
Confidence 4789999987764 3677777766521 1 124677889888886542 1 135678999999
Q ss_pred CCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCCee
Q 004211 203 GHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEA 282 (768)
Q Consensus 203 GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~ 282 (768)
||||||++++. ++.+ +....+...+||.++++.|.+++.. .+|+..+.. ..++++|+. . ..
T Consensus 180 GggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~---------~~~e~i~~~--g--~~ 240 (329)
T 4apw_A 180 GGLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN---------EQAESALNN--G--YM 240 (329)
T ss_dssp CSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS---------BTTTTCSSS--C--SS
T ss_pred CCCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH---------HHHHHHHhc--C--Cc
Confidence 99999999988 4443 3222345679999999999987754 045555443 334444442 1 11
Q ss_pred eEEEeccccCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCC
Q 004211 283 PLNIECLMNEKDVKGFIRREEFEKLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGR 362 (768)
Q Consensus 283 ~~~i~~l~~~~d~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~ 362 (768)
. .+.+. ..+..+.+++.++++++.|...+++. +.+++.++.|+|+||++.+ +.+.|++.|+.++..
T Consensus 241 ~-------~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v 306 (329)
T 4apw_A 241 K-------KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSII 306 (329)
T ss_dssp C-------EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEEC
T ss_pred c-------cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEe
Confidence 0 11121 13457788888888888888888776 2455568999999999998 569999999977778
Q ss_pred cCCchhHHHhhHHHHhhHh
Q 004211 363 TINASECVARGCALQCAML 381 (768)
Q Consensus 363 ~~n~~eava~GAa~~a~~l 381 (768)
..||..|+|+|+..++...
T Consensus 307 ~~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 307 TNNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp CSSGGGHHHHHHHHHHHHH
T ss_pred cCCChhhHHHHHHHHHhhh
Confidence 8999999999999887643
No 30
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.39 E-value=4.8e-12 Score=140.17 Aligned_cols=178 Identities=13% Similarity=0.121 Sum_probs=116.3
Q ss_pred eEEEEEcCccceEEEEEEcCCceEEEeCCCCCccceEEEEeeCC----ceeecHHHHhhhhhCCcchHhHHHHhcCCCCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGGMLDVLLNDESKRETPTVVSFSEK----QRFLGSAGAASAMMNPKSTISQVKRLLGRKFR 77 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~~~~ii~n~~~~r~~Ps~V~~~~~----~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~ 77 (768)
..|+||+||.++++++...+.|.- .+||+|+.... ..+||+++.... +.
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~---------v~PSvVg~~~~~~~~~~~vG~e~~~~~---r~--------------- 76 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQS---------ILPSVYGKYTADEGNKKIFSEQSIGIP---RK--------------- 76 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSE---------EEESEEEEESSCSSCCEECCTTGGGSC---CT---------------
T ss_pred CeEEEECCCcEEEEEECCCCCeee---------ecCceeEEeccCCCccEEEecHHHhcC---cC---------------
Confidence 468999999999999866555333 35999998542 357787532110 00
Q ss_pred ChHHHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHhhccC--CCC-eEEEEeCCCCCHHHH
Q 004211 78 EDDVQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEKNIKI--PIS-NCVIGVPCYLTDVQR 154 (768)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~--~~~-~~VitVPa~~~~~qr 154 (768)
. ..-..|+ .+|.+ ..+ +....+++|+... .++. .-. .++||.|+......|
T Consensus 77 ~-----l~l~~Pi-----~~GvI----------~dw---d~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~R 130 (498)
T 3qb0_A 77 D-----YELKPII-----ENGLV----------IDW---DTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENR 130 (498)
T ss_dssp T-----EEEEESE-----ETTEE----------SCH---HHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHH
T ss_pred c-----eEEeccC-----cCCEE----------ccH---HHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHH
Confidence 0 0001111 13321 112 3334455554432 2221 223 699999999999999
Q ss_pred HHHHHHH-HHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchh
Q 004211 155 RAYLDAA-TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGR 233 (768)
Q Consensus 155 ~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~ 233 (768)
+.+.+.+ +.+|++.+.++.+|.||++++|. ..-||+|+|+|+|+++.+. .|.. +........+||+
T Consensus 131 e~~~eilFE~f~vpav~l~~~~vlalya~G~----------~tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~ 197 (498)
T 3qb0_A 131 KKSLEVLLEGMQFEACYLAPTSTCVSFAAGR----------PNCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGK 197 (498)
T ss_dssp HHHHHHHHTTSCCSEEEEEEHHHHHHHHHTC----------SSEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHH
T ss_pred HHHHHHHHhhcCCCeEeecchHHHHHHHcCC----------CeEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHH
Confidence 9999875 88999999999999999987763 1259999999999999985 3322 1111113579999
Q ss_pred hHHHHHHHHHHH
Q 004211 234 DFDEVLSSYFAA 245 (768)
Q Consensus 234 ~~d~~l~~~l~~ 245 (768)
++|..|.++|..
T Consensus 198 ~lt~~L~~lL~~ 209 (498)
T 3qb0_A 198 FINHLIKKALEP 209 (498)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHHHHh
Confidence 999999998864
No 31
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.35 E-value=3.5e-13 Score=147.93 Aligned_cols=223 Identities=13% Similarity=0.059 Sum_probs=141.0
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCC
Q 004211 139 SNCVIGVPCYLTDVQRRAYLDAA-TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENG 217 (768)
Q Consensus 139 ~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~ 217 (768)
..+++|.|+..+...|+.+.+.+ +.+|++.+.++.+|.+|+++.+.... ......+-||+|+|+|+|+++.+. +|
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~--~~~~~~tglVVDiG~g~T~v~PV~--~G 199 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSK--VTDRSLTGTVVDSGDGVTHIIPVA--EG 199 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTT--TCSCCCCEEEEEESSSCEEEEEEE--TT
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCccc--ccCCCceEEEEECCCCceEEEEEE--CC
Confidence 47999999999999999999887 78999999999999999988774321 011135689999999999999984 33
Q ss_pred eEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCCCCee-----------eEEE
Q 004211 218 HMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEA-----------PLNI 286 (768)
Q Consensus 218 ~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~-----------~~~i 286 (768)
.. +........+||+++|..|.+++..+... ... ...++.+|+.++.-... ...+
T Consensus 200 ~~-l~~~~~rl~~gG~~lt~~L~~lL~~~~~~----~~~---------~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~ 265 (427)
T 3dwl_A 200 YV-IGSSIKTMPLAGRDVTYFVQSLLRDRNEP----DSS---------LKTAERIKEECCYVCPDIVKEFSRFDREPDRY 265 (427)
T ss_dssp EE-CGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----
T ss_pred EE-ehhhheeccccHHHHHHHHHHHHHHcCCC----chh---------HHHHHHHHHhcCcccCCHHHHHHHhhcCcccc
Confidence 22 11111124799999999999888654321 111 14566667666432110 0001
Q ss_pred ec--c--ccCcceEEEecHHHH---HHHHHHH------HHHHHHHHHHHHHhCCCC--CCCcCEEEEecCCCChHHHHHH
Q 004211 287 EC--L--MNEKDVKGFIRREEF---EKLSSSL------LERMRIPCQKALAGSGLN--VEKIHSVELVGSGSRIPAISRM 351 (768)
Q Consensus 287 ~~--l--~~~~d~~~~itr~~f---e~~~~~~------~~~i~~~i~~~l~~~~~~--~~~i~~V~LvGG~srip~v~~~ 351 (768)
.. + .++....+.|..+.| |-+++|- ...|.+.+.+.|.++... ..-...|+|+||+|.+|.+.++
T Consensus 266 ~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~R 345 (427)
T 3dwl_A 266 LKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNR 345 (427)
T ss_dssp CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHH
T ss_pred ceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHH
Confidence 10 1 123334566777776 2333331 234777777777765321 1113569999999999999988
Q ss_pred HHhhcC----------------------CCCCCcCCchhHHHhhHHHHhh
Q 004211 352 LNSLFN----------------------REPGRTINASECVARGCALQCA 379 (768)
Q Consensus 352 l~~~fg----------------------~~v~~~~n~~eava~GAa~~a~ 379 (768)
|++.+. .++..+.++..++=+|++++|.
T Consensus 346 L~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 346 LQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 887551 1223345677899999999985
No 32
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.23 E-value=4.2e-11 Score=105.89 Aligned_cols=82 Identities=17% Similarity=0.380 Sum_probs=75.6
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhh-HhhccCCHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHhHhHHHHh
Q 004211 576 KMERTKDRKNALESYVYEMRDKISN-IYRSFATESEREGISRNLRDTEEWLYEDGDDESENVYAERLEDLKKLVDPIEGR 654 (768)
Q Consensus 576 ~~~~~~~akN~LEs~iy~~r~~l~~-~~~~~~t~~e~~~l~~~l~~~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R 654 (768)
.+|++.++||.||+|||.+|..|.+ .+...+++++++.|...|+++.+||+.+ .+++.++|+.++++|+.++.||..|
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~-~~a~~e~i~~k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDAN-TLAEKDEFEHKRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999975 5888999999999999999999999985 5788999999999999999999999
Q ss_pred hHhH
Q 004211 655 YKDE 658 (768)
Q Consensus 655 ~~e~ 658 (768)
+...
T Consensus 82 ~y~~ 85 (113)
T 3lof_A 82 LYQG 85 (113)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8753
No 33
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.14 E-value=2.4e-10 Score=123.33 Aligned_cols=196 Identities=15% Similarity=0.139 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHc-CC--CceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCC
Q 004211 152 VQRRAYLDAATIA-GL--KPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDE 228 (768)
Q Consensus 152 ~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~ 228 (768)
.+-+.+.+|.+.+ |+ .+-. -||.||+++..... +....++++||||||||++++. ++.+ +-+. ..
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeD-----E~eLGvaiIDmGGGTTd~sVf~--~G~l-v~a~--~i 435 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTP-----GTTRPLAILDLGAGSTDASIIN--PKGD-IIAT--HL 435 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTST-----TCCSSEEEEEECSSEEEEEEEC--TTCC-EEEE--EE
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC-----CCcCCeEEEEeCCCcceEEEEc--CCcE-EEEE--Ee
Confidence 4467888999999 99 6666 89999998776533 5677899999999999999975 3333 1122 35
Q ss_pred CCchhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCC-C---------CeeeEEE--eccc----cC
Q 004211 229 SLGGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSA-N---------AEAPLNI--ECLM----NE 292 (768)
Q Consensus 229 ~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~-~---------~~~~~~i--~~l~----~~ 292 (768)
..||++++..|+.-|. .++ +..||++|. ... . ....+.+ +.+. ..
T Consensus 436 p~gG~~VT~DIA~~Lg----------t~d--------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~R 496 (610)
T 2d0o_A 436 AGAGDMVTMIIARELG----------LED--------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFAR 496 (610)
T ss_dssp ECSHHHHHHHHHHHHT----------CCC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTC
T ss_pred ccchHHHHHHHHHHhC----------CCC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeee
Confidence 7999999999987663 110 178999998 521 1 1123444 3221 11
Q ss_pred -----cceEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHhCCC-----CCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004211 293 -----KDVKGFIRREE--FEKLSSSLLERMRIP--CQKALAGSGL-----NVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 293 -----~d~~~~itr~~--fe~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
.+--..| +.+ +|+ ++-+-+++.+. +..+|+..+. ...+|..|+|+||+|.++.+.++..+.|+.
T Consensus 497 v~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~ 574 (610)
T 2d0o_A 497 VCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAH 574 (610)
T ss_dssp EEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTT
T ss_pred eecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCc
Confidence 0112255 556 666 55555554443 2333544322 345789999999999999999999999975
Q ss_pred -CC-------CCcCCchhHHHhhHHHHhhH
Q 004211 359 -EP-------GRTINASECVARGCALQCAM 380 (768)
Q Consensus 359 -~v-------~~~~n~~eava~GAa~~a~~ 380 (768)
.+ ...-+|..|+|.|.+++.+.
T Consensus 575 y~VRiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 575 YRLVAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp SSCEEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred CCeEEecCCccccCCCcHHHHHHHHHHHhh
Confidence 44 22458999999999987653
No 34
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.12 E-value=1.5e-09 Score=125.52 Aligned_cols=94 Identities=16% Similarity=0.348 Sum_probs=74.0
Q ss_pred eEEEEeCCCCCHHHHHHHHHHH-HHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCe
Q 004211 140 NCVIGVPCYLTDVQRRAYLDAA-TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGH 218 (768)
Q Consensus 140 ~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~ 218 (768)
.+++|.|..++...|+.|.+.+ +..|++.+.++.++.+|++++|. .+-+|||+|++.|.++-|. +|.
T Consensus 200 pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~----------~tglVVDiG~~~T~v~PV~--dG~ 267 (593)
T 4fo0_A 200 RCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL----------SSTCIVDVGDQKTSVCCVE--DGV 267 (593)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC----------SEEEEEEECSSCEEEEEEE--SSC
T ss_pred cEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC----------CceEEEEeCCCceeeeeeE--CCE
Confidence 4999999999999998887764 67799999999999999987763 3579999999999988775 332
Q ss_pred EEEEEEeCCCCCchhhHHHHHHHHHHHH
Q 004211 219 MKILSHAFDESLGGRDFDEVLSSYFAAQ 246 (768)
Q Consensus 219 ~~vl~~~~~~~lGG~~~d~~l~~~l~~~ 246 (768)
. +....-...+||++++..|.+.|..+
T Consensus 268 ~-l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 268 S-HRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp B-CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred E-ehhheEEecccHHHHHHHHHHHHHhc
Confidence 2 11111234699999999999888653
No 35
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.09 E-value=2.7e-10 Score=123.41 Aligned_cols=193 Identities=15% Similarity=0.100 Sum_probs=130.1
Q ss_pred HHHHHHHHHHc-CC--CceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCC
Q 004211 154 RRAYLDAATIA-GL--KPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESL 230 (768)
Q Consensus 154 r~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~l 230 (768)
-+.+.+|.+.+ |+ .+-. -||.||+++..... +....++++||||||||++++.- +.+ +-+. ....
T Consensus 372 m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTed-----E~elGvaiIDmGgGTTd~sVf~~--g~l-v~a~--~ip~ 439 (607)
T 1nbw_A 372 MQVIARELSARLQTEVVVGG--VEANMAIAGALTTP-----GCAAPLAILDLGAGSTDAAIVNA--EGQ-ITAV--HLAG 439 (607)
T ss_dssp SCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTST-----TCCSSEEEEEECSSEEEEEEECS--SSC-EEEE--EEEC
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC-----CCcCCeEEEEeCCCcceEEEEcC--CcE-EEEE--Eecc
Confidence 46688888888 99 6655 89999998776533 56778999999999999999763 333 1122 3578
Q ss_pred chhhHHHHHHHHHHHHHhhhcccCccCChHHHHHHHHHHHHHhhhcCC-C---------CeeeEEE--eccccC---c--
Q 004211 231 GGRDFDEVLSSYFAAQFKQQYDIDVYTNVKASIRLRASCEKLKKVLSA-N---------AEAPLNI--ECLMNE---K-- 293 (768)
Q Consensus 231 GG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~-~---------~~~~~~i--~~l~~~---~-- 293 (768)
||++++..|+.-|. .++ +..||++|. ... . ....+.+ +.+... .
T Consensus 440 gG~~VT~DIA~~Lg----------~~d--------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~ 500 (607)
T 1nbw_A 440 AGNMVSLLIKTELG----------LED--------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVV 500 (607)
T ss_dssp CHHHHHHHHHHHHT----------CSC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEE
T ss_pred chHHHHHHHHHHhC----------CCC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeee
Confidence 99999999987663 110 178999998 521 1 1123444 322110 1
Q ss_pred ----ceEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHhCCC-----CCCCcCEEEEecCCCChHHHHHHHHhhcCC-C
Q 004211 294 ----DVKGFIRREE--FEKLSSSLLERMRIP--CQKALAGSGL-----NVEKIHSVELVGSGSRIPAISRMLNSLFNR-E 359 (768)
Q Consensus 294 ----d~~~~itr~~--fe~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~V~LvGG~srip~v~~~l~~~fg~-~ 359 (768)
+--..| +.+ +|+ ++-+-+++.+. +..+|+..+. ...+|..|+|+||+|.++.+.++..+.|+. .
T Consensus 501 ~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~ 578 (607)
T 1nbw_A 501 YIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYG 578 (607)
T ss_dssp EEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTT
T ss_pred cccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCC
Confidence 111245 555 666 55555554443 4455776544 245679999999999999999999999965 4
Q ss_pred C-------CCcCCchhHHHhhHHHHhh
Q 004211 360 P-------GRTINASECVARGCALQCA 379 (768)
Q Consensus 360 v-------~~~~n~~eava~GAa~~a~ 379 (768)
+ ...-+|..|+|.|.+++.+
T Consensus 579 VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 579 VVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp CEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred eEEecCCccccCCchHHHHHHHHHhhh
Confidence 3 2245899999999997643
No 36
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=98.99 E-value=6.6e-10 Score=99.17 Aligned_cols=81 Identities=16% Similarity=0.366 Sum_probs=72.3
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhh-HhhccCCHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHhHhHHHHh
Q 004211 576 KMERTKDRKNALESYVYEMRDKISN-IYRSFATESEREGISRNLRDTEEWLYEDGDDESENVYAERLEDLKKLVDPIEGR 654 (768)
Q Consensus 576 ~~~~~~~akN~LEs~iy~~r~~l~~-~~~~~~t~~e~~~l~~~l~~~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R 654 (768)
.+|++.++||.||+|||.+|..|.+ .+...+++++|+.|...|+++.+||+++ .+++.++|+.++++|++++.||..|
T Consensus 12 ~~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~-~~ad~e~ik~k~~eL~~~~~~i~~k 90 (120)
T 2p32_A 12 SGLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSN-QTAEKEEFEHQQKDLEGLANPIISK 90 (120)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999975 4778999999999999999999999864 4678999999999999999999988
Q ss_pred hHh
Q 004211 655 YKD 657 (768)
Q Consensus 655 ~~e 657 (768)
++.
T Consensus 91 ~y~ 93 (120)
T 2p32_A 91 LYQ 93 (120)
T ss_dssp HCC
T ss_pred HHH
Confidence 763
No 37
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.97 E-value=3.9e-08 Score=101.26 Aligned_cols=172 Identities=17% Similarity=0.157 Sum_probs=101.0
Q ss_pred ceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhhHHHHHHHHHHHHH
Q 004211 168 PLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRDFDEVLSSYFAAQF 247 (768)
Q Consensus 168 ~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~ 247 (768)
...+++|.+|.+.+...... ..-.++|+||+++.+..+ .+|.+.-......+..|+-.|-+.+++ .+
T Consensus 76 ~~~~v~Ei~ah~~ga~~~~~-------~~~~vidiGGqd~k~i~~--~~g~v~~~~mn~~ca~GtG~~le~~a~----~l 142 (270)
T 1hux_A 76 ADKQMSELSCHAMGASFIWP-------NVHTVIDIGGQDVKVIHV--ENGTMTNFQMNDKCAAGTGRFLDVMAN----IL 142 (270)
T ss_dssp CSEEECHHHHHHHHHHHHCT-------TCCEEEEEETTEEEEEEE--ETTEEEEEEEESSCCTTSHHHHHHHHH----HH
T ss_pred CCCCcccHHHHHHHHHHhCC-------CCCEEEEECCCceEEEEE--eCCceeeeccccccchhhHHHHHHHHH----Hh
Confidence 34679999999865433221 122589999999887777 567554344554455555444444443 33
Q ss_pred hhhcccCccCChHHHHHHHHHHHHHhhhcCCCCeeeEEEeccccCcceEEEecHHHH----------HHHHHHHHHHHHH
Q 004211 248 KQQYDIDVYTNVKASIRLRASCEKLKKVLSANAEAPLNIECLMNEKDVKGFIRREEF----------EKLSSSLLERMRI 317 (768)
Q Consensus 248 ~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~i~~l~~~~d~~~~itr~~f----------e~~~~~~~~~i~~ 317 (768)
+.++.+ +. +.+.+.+..+....... .+.+.++ ++++..+++.+..
T Consensus 143 ----g~~~~e----l~---~la~~~~~p~~~~~~c~--------------vfa~s~v~~l~~~g~~~~di~~av~e~Va~ 197 (270)
T 1hux_A 143 ----EVKVSD----LA---ELGAKSTKRVAISSTCT--------------VFAESEVISQLSKGTDKIDIIAGIHRSVAS 197 (270)
T ss_dssp ----TCCTTT----HH---HHHTTCCSCCCCCCCSH--------------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ----CCCHHH----HH---HHHhhCCCCCCcccccc--------------hhHhHHHHHHhhCCCCHHHHHHHHHHHHHH
Confidence 232211 11 11111111110000000 1122222 3444455555554
Q ss_pred HHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhhHh
Q 004211 318 PCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAML 381 (768)
Q Consensus 318 ~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~l 381 (768)
.+...++..++ .+.|+++||.++.|.+++.+.+.+|.++..+.+++.+.|+|||++|...
T Consensus 198 ~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 198 RVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 45455554322 3679999999999999999999999988888888889999999998754
No 38
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.89 E-value=1.2e-09 Score=96.75 Aligned_cols=77 Identities=16% Similarity=0.398 Sum_probs=67.9
Q ss_pred HHHHHhhHHHHHHHHHHHHhh-HhhccCCHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHhHhHHHHhhHh
Q 004211 580 TKDRKNALESYVYEMRDKISN-IYRSFATESEREGISRNLRDTEEWLYEDGDDESENVYAERLEDLKKLVDPIEGRYKD 657 (768)
Q Consensus 580 ~~~akN~LEs~iy~~r~~l~~-~~~~~~t~~e~~~l~~~l~~~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e 657 (768)
+.++||.||+|||.+|..|.+ .+...+++++|+.|...|+++++||.++ .+++.++|++++++|+.++.||..|+++
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~-~~ad~~~i~~~~~~L~~~~~~i~~~~~~ 79 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKN-QTAEKEEFEHQQKELEKVCNPIITKLYQ 79 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999973 5788999999999999999999999743 4578899999999999999999998764
No 39
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.26 E-value=4.2e-05 Score=78.36 Aligned_cols=75 Identities=9% Similarity=-0.021 Sum_probs=53.0
Q ss_pred ecHHHHH-HHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecC-CCChHHHHHHHHhhc---CCCCCCcCCchhHHHhh
Q 004211 299 IRREEFE-KLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGS-GSRIPAISRMLNSLF---NREPGRTINASECVARG 373 (768)
Q Consensus 299 itr~~fe-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG-~srip~v~~~l~~~f---g~~v~~~~n~~eava~G 373 (768)
.+++++- .++.-+.+++..+...+.+..+ ++.|+++|| .+..|.+++.+.+.+ +.++..+.++..+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 4555543 2333344444444444344444 456999999 899999999999985 57788899999999999
Q ss_pred HHHHh
Q 004211 374 CALQC 378 (768)
Q Consensus 374 Aa~~a 378 (768)
||+++
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99874
No 40
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.79 E-value=6.1e-05 Score=84.40 Aligned_cols=124 Identities=19% Similarity=0.338 Sum_probs=89.0
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHH-HHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCC
Q 004211 139 SNCVIGVPCYLTDVQRRAYLDAA-TIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENG 217 (768)
Q Consensus 139 ~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~ 217 (768)
..+++|.|+.++...|+.|.+.+ +..|++.+.++.+|.||++++|. ...-||+|+|+|+|+++.|. .|
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl---------~ttGLVVDiG~g~T~VvPV~--eG 290 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI---------STSTCVVNIGAAETRIACVD--EG 290 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC---------SSCEEEEEECSSCEEEEEEE--TT
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC---------CCceEEEcCCCceEEEEEEe--CC
Confidence 47999999999999999998887 56899999999999999987653 24579999999999999884 33
Q ss_pred eEEEEEEeCCCCCchhhHHHHHHHHHHHHHhhhccc-CccCChHHHHHHHHHHHHHhhhcCCCC
Q 004211 218 HMKILSHAFDESLGGRDFDEVLSSYFAAQFKQQYDI-DVYTNVKASIRLRASCEKLKKVLSANA 280 (768)
Q Consensus 218 ~~~vl~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~-~~~~~~~~~~rL~~~ae~~K~~Ls~~~ 280 (768)
.. +........+||+++|..|.++|..+- |.. +..-+... =+..++.+|+.++.-.
T Consensus 291 ~v-l~~ai~rL~iGG~dLT~yL~kLL~~rg---ypy~~~~f~t~~---e~eiVrdIKEk~CyVs 347 (655)
T 4am6_A 291 TV-LEHSAITLDYGGDDITRLFALFLLQSD---FPLQDWKIDSKH---GWLLAERLKKNFTTFQ 347 (655)
T ss_dssp EE-CGGGCEEESCCHHHHHHHHHHHHHHTT---CSCCSCCTTSHH---HHHHHHHHHHHHCCCC
T ss_pred EE-EhhheeeecchHHHHHHHHHHHHHHcC---CCccccCCCCcc---hHHHHHHHHHheEEEc
Confidence 21 111111357999999999999987541 100 11111111 1256788888887653
No 41
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=97.13 E-value=0.042 Score=57.66 Aligned_cols=66 Identities=12% Similarity=-0.032 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhc---CCCCCCcC---CchhHHHhhHHHHhhHh
Q 004211 311 LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF---NREPGRTI---NASECVARGCALQCAML 381 (768)
Q Consensus 311 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f---g~~v~~~~---n~~eava~GAa~~a~~l 381 (768)
+.+.+...+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++..+. -.|.++++|+|.+....
T Consensus 228 l~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~ 299 (330)
T 2ivn_A 228 AFAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYK 299 (330)
T ss_dssp HHHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHh
Confidence 33444445555555443 567999999999999999999877 55554444 34778999998765433
No 42
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.97 E-value=0.029 Score=58.20 Aligned_cols=44 Identities=18% Similarity=0.175 Sum_probs=29.4
Q ss_pred cCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004211 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++-...... ....+++++-+|.| +-.+++
T Consensus 98 ~~~p-v~v~NDa~aaal~E~~~g~~---~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 98 TGRP-VFLENDANAAALAEHHLGAA---QGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEechHHHHHHHHHhCCC---CCCCCEEEEEECCc-eeEEEE
Confidence 4666 58999999999876543221 23457888888887 444444
No 43
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.90 E-value=0.0085 Score=62.96 Aligned_cols=69 Identities=16% Similarity=0.057 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHH----HHhCCCCCCCcCEEEEecC-CCChHHHHHHHHhhcC------CCCCCcCCchhHHHhh
Q 004211 305 EKLSSSLLERMRIPCQKA----LAGSGLNVEKIHSVELVGS-GSRIPAISRMLNSLFN------REPGRTINASECVARG 373 (768)
Q Consensus 305 e~~~~~~~~~i~~~i~~~----l~~~~~~~~~i~~V~LvGG-~srip~v~~~l~~~fg------~~v~~~~n~~eava~G 373 (768)
++++..++..+...|-.+ .+..+ ++.|+++|| .+..|.+++.|+..++ .++..+.++..+.|+|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 445555555554444433 23444 345999999 9999999999999873 5677788999999999
Q ss_pred HHHHh
Q 004211 374 CALQC 378 (768)
Q Consensus 374 Aa~~a 378 (768)
||+.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
No 44
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.63 E-value=0.19 Score=52.34 Aligned_cols=45 Identities=20% Similarity=0.250 Sum_probs=31.1
Q ss_pred cCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEE
Q 004211 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 213 (768)
.|++ +.+.|+..|+|++..+.... ....+++++-+|.| +-.+++.
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~---~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAG---QGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCC---CCCCCEEEEEeCcc-eEEEEEE
Confidence 4776 68999999999875543221 23467888889988 5555553
No 45
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.63 E-value=0.011 Score=61.72 Aligned_cols=78 Identities=12% Similarity=0.052 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchh
Q 004211 154 RRAYLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGR 233 (768)
Q Consensus 154 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~ 233 (768)
...+..+-+..|+++-.|-.|.+|.....|.... ++ .....+|+|+|||||.++++. ++.+ .. ..+..+|+.
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~-l~--~~~~~lvvDIGGGStEl~~~~--~~~~--~~-~~Sl~~G~v 171 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYS-LK--PEGEVCVVDQGGGSTEYVFGK--GYKV--RE-VISLPIGIV 171 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHH-TC--CCSEEEEEEEETTEEEEEEEE--TTEE--EE-EEEECCCHH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhh-cc--cCCCEEEEEeCCCcEEEEEEe--CCce--ee-EEEEeccHH
Confidence 3445455557899985555566665554454332 22 345799999999999999975 4443 22 225789999
Q ss_pred hHHHHH
Q 004211 234 DFDEVL 239 (768)
Q Consensus 234 ~~d~~l 239 (768)
.+.+.+
T Consensus 172 ~l~e~~ 177 (315)
T 1t6c_A 172 NLTETF 177 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 887765
No 46
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.55 E-value=0.16 Score=53.23 Aligned_cols=68 Identities=13% Similarity=0.004 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhc---CCCCCCcC---CchhHHHhhHHHHhhHhcC
Q 004211 311 LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF---NREPGRTI---NASECVARGCALQCAMLSP 383 (768)
Q Consensus 311 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f---g~~v~~~~---n~~eava~GAa~~a~~ls~ 383 (768)
+.+.+...+.++++..+ ++.|+|+||.+....+++.|.+.+ |.++..+. -.|.++++|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 44555556666666655 467999999999999999999887 54544433 3588999999876654443
No 47
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.35 E-value=0.13 Score=53.70 Aligned_cols=46 Identities=13% Similarity=0.190 Sum_probs=31.0
Q ss_pred Hc-CCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEE
Q 004211 163 IA-GLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 163 ~A-Gl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 213 (768)
.. |++ +.+.|+..|+|++-.+.... ....+++++-+|.| +-.+++.
T Consensus 116 ~~~~~p-V~v~NDa~aaalaE~~~g~~---~~~~~~v~l~~GtG-iG~gii~ 162 (321)
T 3r8e_A 116 EFPHIH-FKIENDAKCAALGEYYFGEN---KRMQTFILLALGTG-VGSGVMM 162 (321)
T ss_dssp HCTTSE-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEEE
T ss_pred HcCCCC-EEEEchHHHHHHHHHHhCCC---CCCCcEEEEEECCc-eEEEEEE
Confidence 45 665 58999999999875443221 23467888889988 5555543
No 48
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=96.35 E-value=1.1 Score=47.05 Aligned_cols=46 Identities=7% Similarity=0.019 Sum_probs=34.1
Q ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHH-cC--CCceeeccchHHHHHHh
Q 004211 137 PISNCVIGVPCYLTDVQRRAYLDAATI-AG--LKPLRLMHDCTATALGY 182 (768)
Q Consensus 137 ~~~~~VitVPa~~~~~qr~~l~~Aa~~-AG--l~~~~li~Ep~Aaal~y 182 (768)
.+..+.|++|...+......+.+..+. .| .-.+.+.|+..|+|+++
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~ 118 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA 118 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh
Confidence 577899999999887765566665544 34 13568999999999873
No 49
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.34 E-value=0.44 Score=48.93 Aligned_cols=48 Identities=10% Similarity=0.061 Sum_probs=35.9
Q ss_pred CcCEEEEecCCCChHHHHHHHHhhcC-CCCCCcCCchhHHHhhHHHHhhH
Q 004211 332 KIHSVELVGSGSRIPAISRMLNSLFN-REPGRTINASECVARGCALQCAM 380 (768)
Q Consensus 332 ~i~~V~LvGG~srip~v~~~l~~~fg-~~v~~~~n~~eava~GAa~~a~~ 380 (768)
+.+.|+|.||.+..+.+.+.+++.+. .++..+. .+.+.++||+.++..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 45679999998876888888887774 3555555 667889999988753
No 50
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.22 E-value=0.0061 Score=69.13 Aligned_cols=84 Identities=12% Similarity=0.162 Sum_probs=62.8
Q ss_pred EecHHHHHHHHHHHHHHHHHHHHHHH---HhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhH
Q 004211 298 FIRREEFEKLSSSLLERMRIPCQKAL---AGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGC 374 (768)
Q Consensus 298 ~itr~~fe~~~~~~~~~i~~~i~~~l---~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GA 374 (768)
.-+|.++-.+++.+++.+.-.++..+ ++.|. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+||
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~alGA 483 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGY---NIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLLGS 483 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHHHH
Confidence 45788885545555555554444444 34443 47889999999999999999999999888665 3467999999
Q ss_pred HHHhhHhcCCc
Q 004211 375 ALQCAMLSPQY 385 (768)
Q Consensus 375 a~~a~~ls~~~ 385 (768)
|+.|+.-.+.+
T Consensus 484 A~lA~~a~G~~ 494 (554)
T 3l0q_A 484 AMMGTVAAGVF 494 (554)
T ss_dssp HHHHHHHTTSS
T ss_pred HHHHHHHcCCc
Confidence 99998766654
No 51
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=96.20 E-value=0.025 Score=49.21 Aligned_cols=73 Identities=23% Similarity=0.456 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHh----CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHH
Q 004211 657 DEEARAQATGALLKCAMDYRKVVEA----HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEA 732 (768)
Q Consensus 657 e~~~rp~a~~~l~~~l~~~~~~~~~----~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~ 732 (768)
++..+-++.+.+.+.+..+++.+.. ..++++++..|...|+++..||+. ++.....+|+.|++.
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~------------~~~a~~e~i~~k~~e 70 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDA------------NTLAEKDEFEHKRKE 70 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHH------------CTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHc------------CCcCCHHHHHHHHHH
Confidence 3455677777888888888887733 349999999999999999999986 222357899999999
Q ss_pred HHHHhhhhc
Q 004211 733 LDLTCKCIM 741 (768)
Q Consensus 733 l~~~~~~i~ 741 (768)
|+..|.+|+
T Consensus 71 L~~~~~~i~ 79 (113)
T 3lof_A 71 LEQVCNPII 79 (113)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999998
No 52
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=96.08 E-value=0.88 Score=47.42 Aligned_cols=45 Identities=13% Similarity=0.031 Sum_probs=30.9
Q ss_pred cCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEE
Q 004211 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 213 (768)
.|++ +.+.|+..|+|++-.+.... ....+++++-+|.| +-.+++.
T Consensus 120 ~~~p-V~v~NDa~aaalgE~~~g~~---~~~~~~~~l~~GtG-iG~gii~ 164 (327)
T 4db3_A 120 IGRS-VKIENDANCFALSEAWDEEL---QDAPSVMGLILGTG-FGGGLIY 164 (327)
T ss_dssp HSSC-CEEEEHHHHHHHHHHTSTTT---TTCSEEEEEEESSS-EEEEEEE
T ss_pred HCCC-EEEecchhHHHHHHHHhCCC---CCCCcEEEEEeCcc-ceEEEEE
Confidence 4776 68999999999876543321 33567888888887 4455543
No 53
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=96.05 E-value=0.18 Score=52.55 Aligned_cols=44 Identities=20% Similarity=0.290 Sum_probs=30.0
Q ss_pred cCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004211 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++..+.... ....+++++-+|.| +-.+++
T Consensus 108 ~~~p-v~v~ND~~aaa~~e~~~g~~---~~~~~~~~l~~GtG-iG~giv 151 (326)
T 2qm1_A 108 LGIP-FALDNDANVAALGERWKGAG---ENNPDVIFITLGTG-VGGGIV 151 (326)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEecHHHHHHHHHHHhCCC---CCCCcEEEEEECCc-eEEEEE
Confidence 4776 68999999999875443211 23467888889988 555555
No 54
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=96.04 E-value=0.2 Score=51.57 Aligned_cols=49 Identities=8% Similarity=0.027 Sum_probs=34.3
Q ss_pred CcCEEEEecCCCChHHHHHHHHhhcCC------CCCCcCCchhHHHhhHHHHhhH
Q 004211 332 KIHSVELVGSGSRIPAISRMLNSLFNR------EPGRTINASECVARGCALQCAM 380 (768)
Q Consensus 332 ~i~~V~LvGG~srip~v~~~l~~~fg~------~v~~~~n~~eava~GAa~~a~~ 380 (768)
+++.|+|-||.+..+.+.+.|++.+.. ++......+.+.++|||.++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 357799999988877666666666531 2333445678999999987753
No 55
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.97 E-value=0.0099 Score=67.08 Aligned_cols=78 Identities=15% Similarity=0.141 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhhHhcC
Q 004211 305 EKLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSP 383 (768)
Q Consensus 305 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~ls~ 383 (768)
..+++.+++.+.-.++..++..+.....++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.|+.-.+
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHhC
Confidence 34455556665555566666554444457889999999999999999999999888554 4578999999999986543
No 56
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.95 E-value=0.0096 Score=66.73 Aligned_cols=81 Identities=21% Similarity=0.180 Sum_probs=57.8
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCC-CCcCCchhHHHhhHHHH
Q 004211 299 IRREEFEKLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREP-GRTINASECVARGCALQ 377 (768)
Q Consensus 299 itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v-~~~~n~~eava~GAa~~ 377 (768)
-+|.+|- +.+++.+.-.++..++...- .. ++.|.++||+++.+.+.+.+.+.||.++ .. ..+.|+.|+|||+.
T Consensus 374 ~~~~~l~---RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~~e~~alGaA~l 447 (511)
T 3hz6_A 374 TTRAQIL---LAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVK-PDAHLHPLRGLAAL 447 (511)
T ss_dssp CCHHHHH---HHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEEC-CCGGGHHHHHHHHH
T ss_pred CCHHHHH---HHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEe-cCCCCchHHHHHHH
Confidence 3566654 44444444444444333221 23 7889999999999999999999999888 54 45889999999999
Q ss_pred hhHhcCCc
Q 004211 378 CAMLSPQY 385 (768)
Q Consensus 378 a~~ls~~~ 385 (768)
|+.-.+.+
T Consensus 448 A~~a~G~~ 455 (511)
T 3hz6_A 448 AAVELEWS 455 (511)
T ss_dssp HHHHTTSC
T ss_pred HHHHhCCc
Confidence 98766643
No 57
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.91 E-value=0.011 Score=66.16 Aligned_cols=80 Identities=18% Similarity=0.215 Sum_probs=57.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhh
Q 004211 300 RREEFEKLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCA 379 (768)
Q Consensus 300 tr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~ 379 (768)
++.++- +.+++.+.-.++..++...-.. .++.|.++||+++.+.+.+.+.+.||.++..... .|+.|+|||+.|+
T Consensus 365 ~~~~l~---rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~-~e~~alGaA~lA~ 439 (497)
T 2zf5_O 365 GREHLA---RATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRPVV-KETTALGAAYLAG 439 (497)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEESC-SCHHHHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEcCC-CcchHHHHHHHHH
Confidence 555543 4444444444555544432222 5788999999999999999999999988865544 5699999999998
Q ss_pred HhcCC
Q 004211 380 MLSPQ 384 (768)
Q Consensus 380 ~ls~~ 384 (768)
.-.+.
T Consensus 440 ~~~g~ 444 (497)
T 2zf5_O 440 LAVDY 444 (497)
T ss_dssp HHTTS
T ss_pred HHhCc
Confidence 76654
No 58
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.91 E-value=0.0081 Score=66.94 Aligned_cols=53 Identities=23% Similarity=0.249 Sum_probs=45.1
Q ss_pred CcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhhHhcCC
Q 004211 332 KIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSPQ 384 (768)
Q Consensus 332 ~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~ls~~ 384 (768)
.++.|.++||+++.+.+.+.+.+.+|.++......+.+.|+|||+.|+.-.+.
T Consensus 386 ~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~ 438 (484)
T 2itm_A 386 KPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANP 438 (484)
T ss_dssp CCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHCT
T ss_pred CcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcCC
Confidence 46779999999999999999999999988776665556899999999876553
No 59
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.88 E-value=0.014 Score=65.38 Aligned_cols=79 Identities=27% Similarity=0.328 Sum_probs=55.2
Q ss_pred cHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHh
Q 004211 300 RREEFEKLSSS-LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQC 378 (768)
Q Consensus 300 tr~~fe~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a 378 (768)
+|.++-..+-+ +.-.+...+ +.|++.|. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l-~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA 469 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCL-ELIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQA 469 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-HHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHH
Confidence 66665443322 222233322 34444554 46889999999999999999999999888654 45678899999999
Q ss_pred hHhcC
Q 004211 379 AMLSP 383 (768)
Q Consensus 379 ~~ls~ 383 (768)
+.-.+
T Consensus 470 ~~a~G 474 (515)
T 3i8b_A 470 AWVLS 474 (515)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 86554
No 60
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.77 E-value=0.014 Score=65.21 Aligned_cols=79 Identities=9% Similarity=0.074 Sum_probs=56.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHH---HHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHH
Q 004211 300 RREEFEKLSSSLLERMRIPCQ---KALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCAL 376 (768)
Q Consensus 300 tr~~fe~~~~~~~~~i~~~i~---~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~ 376 (768)
+|.+|-. .+++.+.-.++ +.|++.+. .++.|.++||+++.+.+.+.+.+.||.++... .+.|+.|+|||+
T Consensus 364 ~~~~l~R---AvlEgia~~~r~~~~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~ 436 (504)
T 3ll3_A 364 QKPEMAR---AVIEGIIFNLYDAASNLIKNTK---KPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLAAMF 436 (504)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHHHHH
Confidence 5666543 33333333333 33444443 47899999999999999999999999888654 456799999999
Q ss_pred HhhHhcCCc
Q 004211 377 QCAMLSPQY 385 (768)
Q Consensus 377 ~a~~ls~~~ 385 (768)
.|+.-.+.+
T Consensus 437 lA~~a~G~~ 445 (504)
T 3ll3_A 437 LARQALGLN 445 (504)
T ss_dssp HHHHHTTSC
T ss_pred HHHHHcCcc
Confidence 998766543
No 61
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.68 E-value=0.017 Score=64.73 Aligned_cols=81 Identities=15% Similarity=0.066 Sum_probs=56.5
Q ss_pred cHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHh
Q 004211 300 RREEFEKLSSS-LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQC 378 (768)
Q Consensus 300 tr~~fe~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a 378 (768)
+|.+|-..+-+ +.-.+...+ +.|+..|. .++.|.++||+++.+.+.+.+.+.||.++..... .|+.|+|||+.|
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~-~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA 445 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHV-AVLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVA 445 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-HHHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHH
Confidence 56665443322 222223333 33444454 3788999999999999999999999988866654 568899999999
Q ss_pred hHhcCCc
Q 004211 379 AMLSPQY 385 (768)
Q Consensus 379 ~~ls~~~ 385 (768)
+.-.+.+
T Consensus 446 ~~a~G~~ 452 (508)
T 3ifr_A 446 AIGGGDD 452 (508)
T ss_dssp HHHTCSS
T ss_pred HHHhCCC
Confidence 8766543
No 62
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.63 E-value=0.019 Score=64.13 Aligned_cols=82 Identities=20% Similarity=0.257 Sum_probs=56.8
Q ss_pred cHHHHHHHHH-HHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHh
Q 004211 300 RREEFEKLSS-SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQC 378 (768)
Q Consensus 300 tr~~fe~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a 378 (768)
+|.+|-..+- .+.-.+...++.+-+..|. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~la 449 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFLA 449 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHHH
Confidence 5666544322 2333333333332222454 37889999999999999999999999888554 46779999999999
Q ss_pred hHhcCCc
Q 004211 379 AMLSPQY 385 (768)
Q Consensus 379 ~~ls~~~ 385 (768)
+.-.+.+
T Consensus 450 ~~a~G~~ 456 (501)
T 3g25_A 450 GLAVGFW 456 (501)
T ss_dssp HHHTTSS
T ss_pred HHHhCcc
Confidence 8776654
No 63
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.46 E-value=0.019 Score=64.53 Aligned_cols=83 Identities=14% Similarity=0.215 Sum_probs=57.7
Q ss_pred ecHHHHHHHHH-HHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHH
Q 004211 299 IRREEFEKLSS-SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQ 377 (768)
Q Consensus 299 itr~~fe~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~ 377 (768)
-+|.++-..+- .+.-.+...++.+-+..|.. ++.|.++||+++.+.+.+++.+.||.++..+ ...|+.|+|||+.
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~---~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~l 446 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGIR---LHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYL 446 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHHH
Confidence 45665543322 22223333333333345553 7889999999999999999999999888655 4467899999999
Q ss_pred hhHhcCCc
Q 004211 378 CAMLSPQY 385 (768)
Q Consensus 378 a~~ls~~~ 385 (768)
|+.-.+.+
T Consensus 447 A~~a~G~~ 454 (526)
T 3ezw_A 447 AGLAVGFW 454 (526)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCCC
Confidence 99877654
No 64
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=95.45 E-value=0.077 Score=54.43 Aligned_cols=43 Identities=16% Similarity=0.026 Sum_probs=30.0
Q ss_pred cCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004211 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++..+.... ... +++++-+|.| +-.+++
T Consensus 96 ~~~p-v~v~NDa~aaa~~e~~~g~~---~~~-~~v~l~~GtG-iG~gii 138 (289)
T 2aa4_A 96 TNLP-TIAINDAQAAAWAEFQALDG---DIT-DMVFITVSTG-VGGGVV 138 (289)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSCT---TCC-CEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechHHHHHHHHHHhCCC---CCc-eEEEEEeCcc-EEEEEE
Confidence 4775 68999999999876543321 223 7889999988 555555
No 65
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.44 E-value=0.023 Score=63.63 Aligned_cols=83 Identities=13% Similarity=0.209 Sum_probs=56.9
Q ss_pred ecHHHHHHHHH-HHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHH
Q 004211 299 IRREEFEKLSS-SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQ 377 (768)
Q Consensus 299 itr~~fe~~~~-~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~ 377 (768)
-+|.+|-..+- .+.-.+...++.+-+..|. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.
T Consensus 372 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 447 (506)
T 3h3n_X 372 TTKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYL 447 (506)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHH
Confidence 35666544332 2223333333322222354 46789999999999999999999999888554 4677999999999
Q ss_pred hhHhcCCc
Q 004211 378 CAMLSPQY 385 (768)
Q Consensus 378 a~~ls~~~ 385 (768)
|+.-.+.+
T Consensus 448 A~~a~G~~ 455 (506)
T 3h3n_X 448 AGLAVGFW 455 (506)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCcc
Confidence 98766654
No 66
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=95.36 E-value=1.8 Score=44.13 Aligned_cols=42 Identities=17% Similarity=0.082 Sum_probs=28.9
Q ss_pred cCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004211 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++... .. ....+++++-+|.| +-.+++
T Consensus 94 ~~~p-v~v~NDa~aaa~~e~~-~~----~~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 94 YQLP-VHLENDANCVGLSELL-AH----PELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GCCC-EEEEEHHHHHHHHHHH-HC----TTCSSEEEEEESSS-EEEEEE
T ss_pred cCCC-EEEechHHHHHHHHHH-hc----CCCCeEEEEEECCc-eEEEEE
Confidence 4765 5899999999987654 21 23456888888887 445554
No 67
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.28 E-value=0.022 Score=64.76 Aligned_cols=77 Identities=21% Similarity=0.327 Sum_probs=56.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHH---HHHHhCCCCCCCcCEEEEecCCC-ChHHHHHHHHhhcCCCCCCcCCchhHHHhhHH
Q 004211 300 RREEFEKLSSSLLERMRIPCQ---KALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLFNREPGRTINASECVARGCA 375 (768)
Q Consensus 300 tr~~fe~~~~~~~~~i~~~i~---~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~fg~~v~~~~n~~eava~GAa 375 (768)
+|.+|-. .+++.+.-.++ +.|++.|. .++.|.++||++ +.+.+.+++.+.||.+|... .+.|+.|+|||
T Consensus 410 t~~~l~R---AvlEgia~~~r~~~~~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA 482 (572)
T 3jvp_A 410 KPEEIYR---ALLEATAFGTRAIVDAFHGRGV---EVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAA 482 (572)
T ss_dssp CHHHHHH---HHHHHHHHHHHHHHHHHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHH
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHH
Confidence 6666543 34443333333 33444443 478899999999 99999999999999888554 45789999999
Q ss_pred HHhhHhcC
Q 004211 376 LQCAMLSP 383 (768)
Q Consensus 376 ~~a~~ls~ 383 (768)
+.|+.-.+
T Consensus 483 ~lA~~a~G 490 (572)
T 3jvp_A 483 MFASVAAG 490 (572)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcC
Confidence 99987655
No 68
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.24 E-value=0.025 Score=63.29 Aligned_cols=53 Identities=13% Similarity=0.250 Sum_probs=45.1
Q ss_pred CcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhhHhcCCc
Q 004211 332 KIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSPQY 385 (768)
Q Consensus 332 ~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~ls~~~ 385 (768)
.++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.+.+
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G~~ 453 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLAGLAVGFW 453 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHHHHHHhCcc
Confidence 36789999999999999999999999888654 456799999999998766543
No 69
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.11 E-value=0.027 Score=62.86 Aligned_cols=80 Identities=13% Similarity=0.142 Sum_probs=54.3
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHh
Q 004211 300 RREEFEK-LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQC 378 (768)
Q Consensus 300 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a 378 (768)
+|.++-. +++.+.-.+...++.+-+..+. .++.|.++||+++.+.+.+++.+.+|.++... ...|+.|+|||+.|
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMA 443 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHH
Confidence 5655433 2233333333333332222343 35779999999999999999999999888654 44568999999999
Q ss_pred hHhcC
Q 004211 379 AMLSP 383 (768)
Q Consensus 379 ~~ls~ 383 (768)
+.-.+
T Consensus 444 ~~a~G 448 (495)
T 2dpn_A 444 GVGAG 448 (495)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 86554
No 70
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=94.98 E-value=0.016 Score=65.04 Aligned_cols=53 Identities=15% Similarity=0.068 Sum_probs=44.3
Q ss_pred CcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhhHhcCCc
Q 004211 332 KIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCAMLSPQY 385 (768)
Q Consensus 332 ~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~ls~~~ 385 (768)
.++.|.++||+++.|.+.+++.+.||.++... ...|+.|+|||++|+.-.+.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWLAGSRAGVW 477 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHHHHHHcCCc
Confidence 47789999999999999999999999888654 456799999999998766653
No 71
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.92 E-value=0.044 Score=61.23 Aligned_cols=81 Identities=14% Similarity=0.124 Sum_probs=56.2
Q ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHh
Q 004211 300 RREEFEKL-SSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQC 378 (768)
Q Consensus 300 tr~~fe~~-~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a 378 (768)
+|.++-.. ++.+.-.+...++.+-+..|. .++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.|
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA 448 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAA 448 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHH
Confidence 56665443 223333333334333222353 36789999999999999999999999888654 44678999999999
Q ss_pred hHhcCC
Q 004211 379 AMLSPQ 384 (768)
Q Consensus 379 ~~ls~~ 384 (768)
+.-.+.
T Consensus 449 ~~~~G~ 454 (504)
T 2d4w_A 449 GIAVGF 454 (504)
T ss_dssp HHHHTS
T ss_pred HhhcCc
Confidence 876554
No 72
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=94.87 E-value=0.087 Score=54.81 Aligned_cols=78 Identities=10% Similarity=0.100 Sum_probs=47.5
Q ss_pred HHHHHHHHHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchhh
Q 004211 155 RAYLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGRD 234 (768)
Q Consensus 155 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~~ 234 (768)
..+..+-+..|+++-.|-.+-+|.....|.... ++ ......+|+|+|||+|.++++. ++.+ ... ...++|.-.
T Consensus 93 ~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~-~~-~~~~~~lviDIGGGStEl~~~~--~~~~--~~~-~Sl~lG~vr 165 (315)
T 3mdq_A 93 VLIDRIKKEVNIDVEVIDGAREAELIFRGVQQA-VP-MEDHISLAMDIGGGSVEFIIGN--KNEI--LWK-QSFEIGGQR 165 (315)
T ss_dssp HHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHH-SC-CTTCCEEEEEECSSCEEEEEEC--SSCE--EEE-EEESCCHHH
T ss_pred HHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhc-CC-CCCCCEEEEEeCCCceEEEEEE--CCeE--eee-EEEechhhH
Confidence 445555566899874444455554444444332 22 1235799999999999999986 3333 222 246788887
Q ss_pred HHHHH
Q 004211 235 FDEVL 239 (768)
Q Consensus 235 ~d~~l 239 (768)
+.+.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 76643
No 73
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.77 E-value=0.049 Score=60.85 Aligned_cols=81 Identities=10% Similarity=0.145 Sum_probs=55.1
Q ss_pred cHHHHHHH-HHHHHHHHHHHHHHHHHhCCCCCCCc-CEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHH
Q 004211 300 RREEFEKL-SSSLLERMRIPCQKALAGSGLNVEKI-HSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQ 377 (768)
Q Consensus 300 tr~~fe~~-~~~~~~~i~~~i~~~l~~~~~~~~~i-~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~ 377 (768)
+|.++-.. ++.+.-.+...++.+-+..|. .+ +.|.++||+++.+.+.+.+.+.+|.++... ...|+.|+|||+.
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~l 451 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVL 451 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHH
Confidence 56555432 223333333333333222353 35 679999999999999999999999888654 4556899999999
Q ss_pred hhHhcCC
Q 004211 378 CAMLSPQ 384 (768)
Q Consensus 378 a~~ls~~ 384 (768)
|+.-.+.
T Consensus 452 a~~~~G~ 458 (503)
T 2w40_A 452 AGLEVKI 458 (503)
T ss_dssp HHHHTTC
T ss_pred HHHHhCc
Confidence 9876554
No 74
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.53 E-value=0.054 Score=60.32 Aligned_cols=78 Identities=15% Similarity=0.040 Sum_probs=52.3
Q ss_pred EecHHHHHHHHH-HHHHHHHHHHHHHHHh-CCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHH
Q 004211 298 FIRREEFEKLSS-SLLERMRIPCQKALAG-SGLNVEKIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCA 375 (768)
Q Consensus 298 ~itr~~fe~~~~-~~~~~i~~~i~~~l~~-~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa 375 (768)
.-+|.+|-..+- .+.-.+...++ .|++ .|. .++.|.++||+++.+.+.+.+.+.||.++.... .|+.|+|||
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~-~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa 434 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLH-ELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNI 434 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHH-HHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHH-HHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHH
Confidence 446766654332 23333333333 2333 343 367899999999999999999999998886443 589999996
Q ss_pred HHhhHh
Q 004211 376 LQCAML 381 (768)
Q Consensus 376 ~~a~~l 381 (768)
+.|..-
T Consensus 435 ~~A~~a 440 (489)
T 2uyt_A 435 GIQLMT 440 (489)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665443
No 75
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=94.48 E-value=0.57 Score=50.02 Aligned_cols=42 Identities=14% Similarity=0.230 Sum_probs=28.9
Q ss_pred cCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004211 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++..+... .. .+++++-+|.| +-.+++
T Consensus 188 ~~~p-V~v~NDanaaalaE~~~g~----~~-~~~v~l~~GtG-iG~giv 229 (380)
T 2hoe_A 188 YGIE-VWVENDADMGAVGEKWYTK----RD-DSFAWILTGKG-IGAGII 229 (380)
T ss_dssp HCSE-EEEEEHHHHHHHHHHHHTT----CC-SCEEEEEESSS-CEEEEE
T ss_pred hCCC-EEEechHHHHHHHHHHhCC----CC-CcEEEEEeCCc-eEEEEE
Confidence 4775 6899999999987654332 12 67888888887 345554
No 76
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=94.42 E-value=2.2 Score=44.17 Aligned_cols=44 Identities=16% Similarity=0.020 Sum_probs=29.4
Q ss_pred cCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004211 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++..+.... ....+++++-+|.| +-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~---~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEF---TQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTG---GGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcC---CCCCcEEEEEECCc-EEEEEE
Confidence 4666 68999999999875433211 23467888888988 445554
No 77
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=94.13 E-value=2 Score=43.11 Aligned_cols=45 Identities=16% Similarity=0.213 Sum_probs=29.4
Q ss_pred cCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004211 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++....... ......++++-+|.| .-.+++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~--~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAG--AGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTT--TTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCC--CCCCCcEEEEEECcc-eEEEEE
Confidence 4776 68999999999986543221 011235778888887 555654
No 78
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=93.88 E-value=1.2 Score=48.30 Aligned_cols=44 Identities=20% Similarity=0.256 Sum_probs=29.8
Q ss_pred cCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004211 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++..+.... ....+++++-+|.| +-.+++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~---~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHS---QDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCC---CCCCcEEEEEECCc-EEEEEE
Confidence 4776 58999999999875443221 23457888888887 445555
No 79
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=93.80 E-value=3.8 Score=42.73 Aligned_cols=44 Identities=16% Similarity=0.078 Sum_probs=29.6
Q ss_pred cCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004211 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++..+.... ....+++++-+|.| +-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~---~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQG---KGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCC---CCCCcEEEEEECCC-EEEEEE
Confidence 4776 58999999999876543211 23456888888887 445554
No 80
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=93.39 E-value=7.3 Score=43.45 Aligned_cols=60 Identities=17% Similarity=0.091 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhc---CCCCCCcC---CchhHHHhhHH
Q 004211 311 LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF---NREPGRTI---NASECVARGCA 375 (768)
Q Consensus 311 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f---g~~v~~~~---n~~eava~GAa 375 (768)
+++-+...+.++++..+ ++.|+|+||-+....+++.|.+.+ |.++..+. -.|.++..|.+
T Consensus 232 ~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~~~~~~Dngamia~~ 297 (540)
T 3en9_A 232 AFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWL 297 (540)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCCHHHHSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCHHHHHHH
Confidence 34444555666666655 467999999999999999999876 44443332 23455555554
No 81
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=93.23 E-value=2.3 Score=45.57 Aligned_cols=44 Identities=23% Similarity=0.336 Sum_probs=29.8
Q ss_pred cCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004211 164 AGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
.|++ +.+.|+..|+|++..+.... ....+++++-+|.| +-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~---~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGAS---RGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCC---CCCCcEEEEEECCc-EEEEEE
Confidence 4776 58999999999875443211 23456888888887 445555
No 82
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=92.36 E-value=1.1 Score=43.76 Aligned_cols=45 Identities=20% Similarity=0.252 Sum_probs=39.9
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhhc
Q 004211 682 HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCIM 741 (768)
Q Consensus 682 ~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i~ 741 (768)
..++.++++.+.+.++++..||+.. ...++..+.++|++.|++|.
T Consensus 167 ~~l~~~~k~~i~~~l~~~~~~L~~~---------------~~~~i~~~~~~L~~~~~~i~ 211 (219)
T 4e81_A 167 DKLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQELAQVSQKLM 211 (219)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHHHHHHHHHHTHHHH
T ss_pred hhCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHHHHHHHH
Confidence 3489999999999999999999752 36899999999999999987
No 83
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=92.23 E-value=0.39 Score=41.96 Aligned_cols=70 Identities=16% Similarity=0.313 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh----CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHH
Q 004211 660 ARAQATGALLKCAMDYRKVVEA----HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDL 735 (768)
Q Consensus 660 ~rp~a~~~l~~~l~~~~~~~~~----~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~ 735 (768)
.+-++-+.+.+.|..+++.+.. ..++++++..|.+.|+++..||+.. + .-...+|+.+.+.|++
T Consensus 15 e~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~---~---------~ad~e~ik~k~~eL~~ 82 (120)
T 2p32_A 15 VPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSN---Q---------TAEKEEFEHQQKDLEG 82 (120)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHH---T---------TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcC---C---------cCCHHHHHHHHHHHHH
Confidence 3555666677777777777632 2389999999999999999999741 1 1125789999999999
Q ss_pred Hhhhhc
Q 004211 736 TCKCIM 741 (768)
Q Consensus 736 ~~~~i~ 741 (768)
.+.+|.
T Consensus 83 ~~~~i~ 88 (120)
T 2p32_A 83 LANPII 88 (120)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999998
No 84
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=92.16 E-value=2.5 Score=42.97 Aligned_cols=69 Identities=10% Similarity=-0.106 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCCh--HHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhhH
Q 004211 306 KLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRI--PAISRMLNSLFNREPGRTINASECVARGCALQCAM 380 (768)
Q Consensus 306 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sri--p~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~~ 380 (768)
..+..++++....+-..+ ...+. .+...|+|.||-++. +.+++.+++.. .++ ..+..+...||+.++..
T Consensus 210 ~~A~~i~~~~~~~La~~i-~~~~~-~~p~~vvlgGGv~~~~~~~l~~~l~~~~-~~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 210 PAVYSLVQNSFDDFLVRN-VLRYN-RPDLPLHFIGSVAFHYREVLSSVIKKRG-LTL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHHH-TGGGC-CTTSCEEEESHHHHHTHHHHHHHHHHTT-CCE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hcccC-CCCceEEEECchHHhhHHHHHHHHHHcC-Cee---cccCcCHHHHHHHHHHh
Confidence 344455556555555555 22221 146779999998776 66777766543 122 23557889999998854
No 85
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=91.73 E-value=0.16 Score=56.25 Aligned_cols=72 Identities=15% Similarity=0.005 Sum_probs=53.2
Q ss_pred HHHHHHHHHH--HHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhh-cCCCCCCcCCchhHHHhhHHHHhhHh
Q 004211 305 EKLSSSLLER--MRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSL-FNREPGRTINASECVARGCALQCAML 381 (768)
Q Consensus 305 e~~~~~~~~~--i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~-fg~~v~~~~n~~eava~GAa~~a~~l 381 (768)
..+++.+++. +.-.++..++... ..+.|.++||++++|.+.+.+.+. ||.++..+. ..|+.|+|||++|+.-
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~-~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRPDCAVYTAN-AHNDVSFGALRLIDPG 436 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHSTTSEEEEES-SCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcC-CCchHHHHHHHHhCcc
Confidence 3455555553 4444555555533 126899999999999999999999 998886664 4568899999999854
No 86
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=89.84 E-value=2.3 Score=42.33 Aligned_cols=21 Identities=24% Similarity=0.425 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
..++||+|+|+++.++++++.
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 579999999999999997654
No 87
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=88.73 E-value=3 Score=40.79 Aligned_cols=45 Identities=13% Similarity=0.108 Sum_probs=38.7
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhhc
Q 004211 682 HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCIM 741 (768)
Q Consensus 682 ~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i~ 741 (768)
..+++++++.+.+.|++++.||.. + ...++..+.++|++.+.+|.
T Consensus 164 ~~~~~~~k~~i~~~l~~~~~wl~~----~-----------d~~~~~~~~~~L~~~~~~i~ 208 (227)
T 1u00_A 164 ALLSAAERQVIDDAAAHLSEVAQG----D-----------DVDAIEQAIKNVDKQTQDFA 208 (227)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHTTS----S-----------CHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhc----C-----------CHHHHHHHHHHHHHHHHHHH
Confidence 348999999999999999999962 1 25889999999999999886
No 88
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=88.69 E-value=0.56 Score=40.40 Aligned_cols=65 Identities=20% Similarity=0.436 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHH--h--CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhh
Q 004211 665 TGALLKCAMDYRKVVE--A--HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCI 740 (768)
Q Consensus 665 ~~~l~~~l~~~~~~~~--~--~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i 740 (768)
-+.+.+.|..+++.+. . ..++++++..|...|+++..||+.... -...+|+.+.+.|++.+.+|
T Consensus 6 rN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~------------ad~~~i~~~~~~L~~~~~~i 73 (113)
T 1ud0_A 6 SHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQT------------AEKEEFEHQQKELEKVCNPI 73 (113)
T ss_dssp HHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCc------------cCHHHHHHHHHHHHHHHHHH
Confidence 3445555666666662 1 248999999999999999999974211 12378999999999999998
Q ss_pred c
Q 004211 741 M 741 (768)
Q Consensus 741 ~ 741 (768)
.
T Consensus 74 ~ 74 (113)
T 1ud0_A 74 I 74 (113)
T ss_dssp H
T ss_pred H
Confidence 8
No 89
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=87.63 E-value=26 Score=35.52 Aligned_cols=64 Identities=13% Similarity=0.004 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCC--hHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhh
Q 004211 307 LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSR--IPAISRMLNSLFNREPGRTINASECVARGCALQCA 379 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr--ip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~ 379 (768)
.+..++++....+-..+...-. . +...|+|.||.+. .|.+.+.+++.+- -++.+.++||+++|.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i~-------~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRLV-------APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHCC-------CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhcc-------CCCCCHHHHHHHHHh
Confidence 3445555555555555554321 2 5677999998764 4566666666431 145677999998874
No 90
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=87.62 E-value=0.86 Score=47.79 Aligned_cols=80 Identities=18% Similarity=0.286 Sum_probs=48.2
Q ss_pred HHHHHHHHHcCCCceeeccchHHHHHHh-hhcccCCCC-CCCcEEEEEEeCCceEEEEEEEe--eC--CeEEEEEEeCCC
Q 004211 155 RAYLDAATIAGLKPLRLMHDCTATALGY-GIYKTDFSN-VGPTYVVFVDIGHCDTQVCVASY--EN--GHMKILSHAFDE 228 (768)
Q Consensus 155 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~-~~~~~vlv~D~GggT~dvsv~~~--~~--~~~~vl~~~~~~ 228 (768)
..+..+-+..|+++ .+|+-..=|.+.| |... .++. .....++++|+|||||+++++.- .. +.+ .. ....
T Consensus 106 ~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~-~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~~-~~Sl 180 (343)
T 3cer_A 106 EFEDEIERILGVRP-EVIPGTEEADLSFLGATS-VVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--QG-AFSM 180 (343)
T ss_dssp HHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHS-SCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--SE-EEEE
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHh-hCccccccCCEEEEEeCCCceEEEEeecCccCccccc--ce-eEEE
Confidence 44555556679987 5665555455444 4322 2221 12356999999999999998753 21 111 11 2246
Q ss_pred CCchhhHHHHH
Q 004211 229 SLGGRDFDEVL 239 (768)
Q Consensus 229 ~lGG~~~d~~l 239 (768)
.+|+..+.+.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 79999888765
No 91
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=85.93 E-value=0.88 Score=50.61 Aligned_cols=76 Identities=14% Similarity=0.180 Sum_probs=46.9
Q ss_pred HHHHHHHHHcCCCceeeccchHHHHHHh-hhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCchh
Q 004211 155 RAYLDAATIAGLKPLRLMHDCTATALGY-GIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGGR 233 (768)
Q Consensus 155 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG~ 233 (768)
..+..+-+..|+++ .+|+...=|.+.| |.... ++ .....+|+|+|||+|.+++.. ++.+ ... ...++|.-
T Consensus 100 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~-~~--~~~~~lviDIGGGStEl~~~~--~~~~--~~~-~Sl~lG~v 170 (513)
T 1u6z_A 100 DFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHT-QP--EKGRKLVIDIGGGSTELVIGE--NFEP--ILV-ESRRMGCV 170 (513)
T ss_dssp HHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHH-SC--CCSCEEEEEECSSCEEEEEEE--TTEE--EEE-EEESCCHH
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhh-cc--CCCCEEEEEECCCcEEEEEEe--CCee--eEE-EEEeccHH
Confidence 33444445569887 5665554444444 44332 22 122699999999999999874 4443 222 24689998
Q ss_pred hHHHHH
Q 004211 234 DFDEVL 239 (768)
Q Consensus 234 ~~d~~l 239 (768)
.+.+.+
T Consensus 171 rlte~f 176 (513)
T 1u6z_A 171 SFAQLY 176 (513)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887765
No 92
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=85.82 E-value=34 Score=35.12 Aligned_cols=50 Identities=18% Similarity=0.188 Sum_probs=31.2
Q ss_pred HHcCCCceeeccchHHHHHHhhhccc-------CCCCCCCcEEEEEEeCCceEEEEEE
Q 004211 162 TIAGLKPLRLMHDCTATALGYGIYKT-------DFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 162 ~~AGl~~~~li~Ep~Aaal~y~~~~~-------~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
+..|++.+.+.|+..|+|++-..... .-......+++++-+|-|- -.+++
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGi-G~giv 155 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGL-GVAHL 155 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSE-EEEEE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccc-eEEEE
Confidence 34588767999999999987543210 0001234668888898883 44444
No 93
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=85.54 E-value=0.52 Score=39.44 Aligned_cols=22 Identities=27% Similarity=0.397 Sum_probs=19.9
Q ss_pred CeEEEEEcCccceEEEEEEcCC
Q 004211 1 MSVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 1 m~viGID~GTt~s~va~~~~g~ 22 (768)
|.++|||+|+..+.||+.++.+
T Consensus 1 mriLglD~G~kriGvAvsd~~~ 22 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEGV 22 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSCC
T ss_pred CcEEEEEeCCCEEEEEEEeCCC
Confidence 7899999999999999988754
No 94
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=83.68 E-value=15 Score=41.00 Aligned_cols=77 Identities=13% Similarity=0.041 Sum_probs=51.8
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC-CCCC-cCCchhHHHhhHHHHh
Q 004211 302 EEFEKLSSS-LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR-EPGR-TINASECVARGCALQC 378 (768)
Q Consensus 302 ~~fe~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~-~v~~-~~n~~eava~GAa~~a 378 (768)
.++-..++. +.+-+...+..+.+..+ ++.|.|.||.+....+.+.|.+..+. .+.. +.-.|.++++|+|+++
T Consensus 281 ~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a 355 (576)
T 3ven_A 281 RDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAV 355 (576)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHH
Confidence 444333333 33334445555555554 67799999999999999999877653 3322 2355899999999998
Q ss_pred hHhcC
Q 004211 379 AMLSP 383 (768)
Q Consensus 379 ~~ls~ 383 (768)
....+
T Consensus 356 ~~~~g 360 (576)
T 3ven_A 356 AVELG 360 (576)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 76644
No 95
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=82.76 E-value=4.5 Score=46.50 Aligned_cols=70 Identities=19% Similarity=0.127 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHh---CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHh
Q 004211 661 RAQATGALLKCAMDYRKVVEA---HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTC 737 (768)
Q Consensus 661 rp~a~~~l~~~l~~~~~~~~~---~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 737 (768)
+-++.+.+.+.+...+..+.. ..+++++++++.+.+++++.||.+.-. --+..+++.|+++|++.+
T Consensus 549 ~~~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~-----------~~~~~~~~~~~~~l~~~~ 617 (675)
T 3d2f_A 549 TEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGF-----------DSIKAKYIAKYEELASLG 617 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGG-----------GCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCc-----------hhhHHHHHHHHHHHHHHH
Confidence 344455555566566665521 238999999999999999999964110 113567888888888887
Q ss_pred hhhc
Q 004211 738 KCIM 741 (768)
Q Consensus 738 ~~i~ 741 (768)
++|.
T Consensus 618 ~~i~ 621 (675)
T 3d2f_A 618 NIIR 621 (675)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 96
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=82.22 E-value=4.8 Score=41.17 Aligned_cols=51 Identities=16% Similarity=0.255 Sum_probs=32.9
Q ss_pred HHHHHHHHHHcCCCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEE
Q 004211 154 RRAYLDAATIAGLKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVA 212 (768)
Q Consensus 154 r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~ 212 (768)
++.+.+. .|++ +.+.|+..|+|++-.+.... ....+++++-+|-| .-.+++
T Consensus 90 ~~~l~~~---~~~p-V~v~NDanaaalaE~~~G~~---~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 90 LQTVXNE---MXIP-VGFSTDVNAAALGEFLFGEA---XGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HHHHHHH---HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHH---hCCC-EEEechhHHHHHHHHHhCCC---CCCCcEEEEEECCc-eEEEEE
Confidence 4444443 3776 58999999999876544321 23467888888876 445554
No 97
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=81.43 E-value=7.1 Score=44.27 Aligned_cols=45 Identities=20% Similarity=0.252 Sum_probs=39.2
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhhc
Q 004211 682 HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCIM 741 (768)
Q Consensus 682 ~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i~ 741 (768)
..+++++++.+.+.+++++.||+.. ...+++.+.++|++.+.++.
T Consensus 555 ~~~~~~~~~~~~~~~~~~~~~l~~~---------------~~~~~~~~~~~l~~~~~~~~ 599 (605)
T 4b9q_A 555 DKLPADDKTAIESALTALETALKGE---------------DKAAIEAKMQELAQVSQKLM 599 (605)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHSS---------------CHHHHHHHHHHHHHHTHHHH
T ss_pred hhCCHHHHHHHHHHHHHHHHHHhcC---------------CHHHHHHHHHHHHHHHHHHH
Confidence 3479999999999999999999741 15899999999999999987
No 98
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=81.31 E-value=5.1 Score=45.47 Aligned_cols=45 Identities=20% Similarity=0.256 Sum_probs=39.0
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhhc
Q 004211 682 HSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCIM 741 (768)
Q Consensus 682 ~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i~ 741 (768)
..+++++++.+.+.+++++.||+. + ...+++.+.++|++.+.+|.
T Consensus 555 ~~~~~~~~~~i~~~~~~~~~~l~~----~-----------~~~~~~~~~~~l~~~~~~~~ 599 (605)
T 2kho_A 555 DKLPADDKTAIESALTALETALKG----E-----------DKAAIEAKMQELAQVSQKLM 599 (605)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHTTS----S-----------CHHHHHHHHHHHHTTCHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhc----C-----------CHHHHHHHHHHHHHHHHHHH
Confidence 347999999999999999999973 1 46899999999999998876
No 99
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=80.72 E-value=18 Score=39.46 Aligned_cols=58 Identities=12% Similarity=0.015 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHcCCC--ceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEee
Q 004211 151 DVQRRAYLDAATIAGLK--PLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYE 215 (768)
Q Consensus 151 ~~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~ 215 (768)
..-.+.+.+|.+.-|++ ++.++|+.+|++++.++.. +..++-+=+|-|+=-+.+....
T Consensus 185 ~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~-------~~~~iglIlGTG~N~~y~e~~~ 244 (485)
T 3o8m_A 185 HDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-------PQTKMGIIIGTGVNGAYYDVVS 244 (485)
T ss_dssp SBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-------TTEEEEEEESSSEEEEEEEEGG
T ss_pred ccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC-------CCcEEEEEEecCcceEEEeecc
Confidence 45577888999888886 4789999999999876642 3456666678887666666543
No 100
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=79.66 E-value=0.96 Score=41.14 Aligned_cols=22 Identities=23% Similarity=0.549 Sum_probs=19.5
Q ss_pred CeEEEEEcCccceEEEEEEcCC
Q 004211 1 MSVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 1 m~viGID~GTt~s~va~~~~g~ 22 (768)
|.++|||+|+..|++|+.++.+
T Consensus 3 mriLGiDpG~~riGvAv~d~~g 24 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEMG 24 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTTS
T ss_pred CEEEEEEccCCEEEEEEEECCC
Confidence 6799999999999999988654
No 101
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=79.27 E-value=2.2 Score=47.24 Aligned_cols=74 Identities=18% Similarity=0.189 Sum_probs=45.4
Q ss_pred HHHHHHHHHHcCCCceeeccch-HHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeCCCCCch
Q 004211 154 RRAYLDAATIAGLKPLRLMHDC-TATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASYENGHMKILSHAFDESLGG 232 (768)
Q Consensus 154 r~~l~~Aa~~AGl~~~~li~Ep-~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~~~~lGG 232 (768)
...+..+-+..|+++ .+|+-. +|...+.|.... ++ ....+|+|+|||+|.++++. ++.+ .. ....++|.
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~-~~---~~~~lvvDIGGGStEl~~~~--~~~~--~~-~~Sl~lG~ 172 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISG-FY---QPDGIAGDLGGGSLELIDIK--DKSC--GE-GITLPLGG 172 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHH-SS---SCEEEEEEECSSCEEEEEEE--TTEE--CC-CEEESCCH
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhc-CC---CCCeEEEEeCCCceEEEEee--CCee--ee-EEEecceE
Confidence 445555556789987 555544 444444444332 21 12459999999999999986 4433 11 22467888
Q ss_pred hhHHH
Q 004211 233 RDFDE 237 (768)
Q Consensus 233 ~~~d~ 237 (768)
-.+.+
T Consensus 173 vrl~e 177 (508)
T 3hi0_A 173 LRLSE 177 (508)
T ss_dssp HHHHH
T ss_pred Eehhh
Confidence 87765
No 102
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=78.98 E-value=7.1 Score=42.42 Aligned_cols=56 Identities=11% Similarity=-0.076 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHcCCC--ceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEe
Q 004211 152 VQRRAYLDAATIAGLK--PLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASY 214 (768)
Q Consensus 152 ~qr~~l~~Aa~~AGl~--~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~ 214 (768)
.-++.+.++...-|++ ++.++|+..|++++-.+.. ..+++.+=+|-|+=-..+...
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~-------~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD-------AXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC-------TTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC-------CccEEEEEECcEEEEEEEECC
Confidence 4467777887666765 5899999999999876622 356777778888666666554
No 103
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=78.95 E-value=5.1 Score=46.62 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhc---CCCCCCcCC---chhHHHhhHHHHhhHhc
Q 004211 313 ERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF---NREPGRTIN---ASECVARGCALQCAMLS 382 (768)
Q Consensus 313 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f---g~~v~~~~n---~~eava~GAa~~a~~ls 382 (768)
+-+...+.++.++.| ++.|+|.||......+.+.|.+.+ |.++..+.. -|..+|+|+|++|+..-
T Consensus 691 ~~L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L 761 (772)
T 4g9i_A 691 RAFAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYL 761 (772)
T ss_dssp HHHHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHH
Confidence 334455566666555 566999999999999999999887 455544432 39999999999887643
No 104
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=76.30 E-value=2.8 Score=44.02 Aligned_cols=20 Identities=20% Similarity=0.290 Sum_probs=17.4
Q ss_pred CcEEEEEEeCCceEEEEEEE
Q 004211 194 PTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 194 ~~~vlv~D~GggT~dvsv~~ 213 (768)
...++|+|+|||+|.+++..
T Consensus 139 ~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 139 NKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp SSCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEeCCCceEEEEec
Confidence 35799999999999999873
No 105
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=72.36 E-value=3.5 Score=37.73 Aligned_cols=19 Identities=16% Similarity=0.347 Sum_probs=17.8
Q ss_pred CeEEEEEcCccceEEEEEE
Q 004211 1 MSVVGFDIGNENCVIAAVK 19 (768)
Q Consensus 1 m~viGID~GTt~s~va~~~ 19 (768)
|.|+|||-|++++..+++.
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 8899999999999999985
No 106
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=70.26 E-value=9 Score=40.05 Aligned_cols=71 Identities=17% Similarity=0.139 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcC-CCCCC----cCCchhHHHhhHHHHhhH
Q 004211 307 LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFN-REPGR----TINASECVARGCALQCAM 380 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg-~~v~~----~~n~~eava~GAa~~a~~ 380 (768)
+..-+..-+...|-+.++... ..++.|+++||+++.|.+.++|++.++ ..+.. .+++|.-=|..-|++|..
T Consensus 261 v~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 261 IQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 344444444455555555432 136789999999999999999999985 43321 223443334445666654
No 107
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=69.56 E-value=8.5 Score=43.66 Aligned_cols=65 Identities=11% Similarity=0.030 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhc-CCCCCC---cCCchhHHHhhHHHHhhH
Q 004211 311 LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF-NREPGR---TINASECVARGCALQCAM 380 (768)
Q Consensus 311 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f-g~~v~~---~~n~~eava~GAa~~a~~ 380 (768)
+++.+...+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++.. ..-.|.++|+|.|++|+.
T Consensus 583 la~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 583 LAQGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 33444445555555544 568999999999999999999988 544322 234599999999998864
No 108
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=67.70 E-value=8.6 Score=40.21 Aligned_cols=69 Identities=16% Similarity=0.126 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcC-CCC------CCcCCchhHHHhhHHHHh
Q 004211 306 KLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFN-REP------GRTINASECVARGCALQC 378 (768)
Q Consensus 306 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg-~~v------~~~~n~~eava~GAa~~a 378 (768)
++..-+..-+...|-+.+.... ..+.|+++||+++.|.+.++|++.++ .++ ..+.+.-||+|. |++|
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~LA 340 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWLA 340 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHHH
Confidence 4444555555555666665532 35689999999999999999999994 233 233455566554 5566
Q ss_pred hH
Q 004211 379 AM 380 (768)
Q Consensus 379 ~~ 380 (768)
..
T Consensus 341 ~~ 342 (370)
T 3cqy_A 341 MR 342 (370)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 109
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=66.76 E-value=4 Score=37.58 Aligned_cols=21 Identities=29% Similarity=0.330 Sum_probs=18.7
Q ss_pred CeEEEEEcCccceEEEEEEcC
Q 004211 1 MSVVGFDIGNENCVIAAVKQG 21 (768)
Q Consensus 1 m~viGID~GTt~s~va~~~~g 21 (768)
|-|+|||-|++.+..+++...
T Consensus 1 MrILGIDPGl~~tG~gvi~~~ 21 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAVE 21 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEEC
T ss_pred CEEEEEccccCceEEEEEEec
Confidence 889999999999999997643
No 110
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=65.86 E-value=4.4 Score=36.08 Aligned_cols=21 Identities=19% Similarity=0.360 Sum_probs=19.0
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|+..+.||+.++.+
T Consensus 4 ~iLglD~G~kriGvAvsd~~~ 24 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRIT 24 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTT
T ss_pred eEEEEEeCCCEEEEEEEcCCC
Confidence 489999999999999998765
No 111
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=63.38 E-value=9.1 Score=41.56 Aligned_cols=20 Identities=20% Similarity=0.290 Sum_probs=17.2
Q ss_pred CcEEEEEEeCCceEEEEEEE
Q 004211 194 PTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 194 ~~~vlv~D~GggT~dvsv~~ 213 (768)
...++|+|+|||+|.++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 45689999999999999874
No 112
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=62.92 E-value=11 Score=43.49 Aligned_cols=65 Identities=15% Similarity=0.018 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhc---CCCCCC---cCCchhHHHhhHHHHhhHhc
Q 004211 313 ERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLF---NREPGR---TINASECVARGCALQCAMLS 382 (768)
Q Consensus 313 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f---g~~v~~---~~n~~eava~GAa~~a~~ls 382 (768)
+.+...+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++.. ..-.|-++|+|.|++|+...
T Consensus 679 ~~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 679 NFTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HHHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 333344445554444 567999999999999999999887 444432 22348999999999887543
No 113
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=62.31 E-value=62 Score=33.78 Aligned_cols=45 Identities=16% Similarity=0.107 Sum_probs=30.4
Q ss_pred cCCCceeeccchHHHHHHhhhcc-------------cCCCCCCCcEEEEEEeCCceEEEEEEE
Q 004211 164 AGLKPLRLMHDCTATALGYGIYK-------------TDFSNVGPTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 164 AGl~~~~li~Ep~Aaal~y~~~~-------------~~~~~~~~~~vlv~D~GggT~dvsv~~ 213 (768)
.|++ +.+.|+..|+|++-.+.. .. ....+++++-+|.| +-.+++.
T Consensus 108 ~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~---~~~~~~v~l~lGtG-IG~givi 165 (366)
T 3mcp_A 108 FGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGST---KRYKNLLGVTLGTG-FGAGVVI 165 (366)
T ss_dssp HCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCC---CCCCEEEEEEESSS-EEEEEEE
T ss_pred HCCC-EEEechhhHHHHHHHHhCCCccccccccccccc---CCCCcEEEEEECCc-ceEEEEE
Confidence 4887 589999999998754432 11 23567888888876 4455543
No 114
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=61.59 E-value=1.4e+02 Score=30.07 Aligned_cols=23 Identities=9% Similarity=-0.083 Sum_probs=17.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Q 004211 688 VRDAVIDECSKAEEWLREKVTQQ 710 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q 710 (768)
++..+...++++..|+.++....
T Consensus 218 ~~~~f~~~~~e~~~Wl~ek~~~L 240 (326)
T 3kbt_A 218 DLHRYFYTGAEILGLIDEKHREL 240 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 45667778999999999987654
No 115
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=61.06 E-value=79 Score=31.46 Aligned_cols=23 Identities=13% Similarity=0.273 Sum_probs=14.3
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHh
Q 004211 577 MERTKDRKNALESYVYEMRDKIS 599 (768)
Q Consensus 577 ~~~~~~akN~LEs~iy~~r~~l~ 599 (768)
....++.++.|..|.-++|.++.
T Consensus 65 ~~~~eelr~kL~p~~~el~~~l~ 87 (273)
T 3s84_A 65 NTQAEQLRRQLTPYAQRMERVLR 87 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHH
Confidence 33445666666666666666664
No 116
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=57.54 E-value=6.1 Score=43.69 Aligned_cols=21 Identities=5% Similarity=0.063 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||++++++++..+
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g 25 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEEL 25 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTC
T ss_pred EEEEEEeCCcceEEEEECCCC
Confidence 489999999999999998654
No 117
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=57.07 E-value=5.8 Score=43.89 Aligned_cols=21 Identities=19% Similarity=0.378 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||++++++++..+
T Consensus 5 ~~lgIDiGtts~K~~l~d~~G 25 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDING 25 (504)
T ss_dssp EEEEEEECSSEEEEEEEETTS
T ss_pred EEEEEEecCCceEEEEEcCCC
Confidence 489999999999999998654
No 118
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=55.49 E-value=5.7 Score=44.20 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=18.1
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||++++++++..+
T Consensus 5 YvlgID~GTss~Ka~l~d~~G 25 (526)
T 3ezw_A 5 YIVALDQGTTSSRAVVMDHDA 25 (526)
T ss_dssp EEEEEEECSSEEEEEEECTTC
T ss_pred EEEEEEccccceeeeEEcCCC
Confidence 379999999999999987554
No 119
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=55.47 E-value=5.8 Score=43.77 Aligned_cols=21 Identities=14% Similarity=0.219 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||++++++++..+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g 23 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEG 23 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTS
T ss_pred EEEEEeeCCcceEEEEECCCC
Confidence 489999999999999997654
No 120
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=55.10 E-value=1.4e+02 Score=27.98 Aligned_cols=48 Identities=15% Similarity=0.268 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHh
Q 004211 689 RDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTC 737 (768)
Q Consensus 689 ~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 737 (768)
+..+...+++...|+.++...-.. ..+-+-+-.+..+..|.+.++..+
T Consensus 111 l~qf~~~~~~~~~Wl~e~e~~~~~-~~~g~dl~~v~~ll~kh~~~~~el 158 (216)
T 1u5p_A 111 LHQFFRDMDDEESWIKEKKLLVSS-EDYGRDLTGVQNLRKKHKRLEAEL 158 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHhcC-cccCCCHHHHHHHHHHHHHHHHHH
Confidence 344567788899999998764333 223333444555555555555443
No 121
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=54.47 E-value=7.3 Score=43.64 Aligned_cols=21 Identities=19% Similarity=0.412 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.+||||+|||++++++++..+
T Consensus 6 ~~lgIDiGtts~ka~l~d~~G 26 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQG 26 (554)
T ss_dssp EEEEEEECSSEEEEEEEETTS
T ss_pred EEEEEEECcccEEEEEECCCC
Confidence 589999999999999998554
No 122
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=54.15 E-value=6.8 Score=43.40 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||++++++++..+
T Consensus 4 ~~lgIDiGtts~k~~l~d~~G 24 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMDHDA 24 (510)
T ss_dssp EEEEEEECSSEEEEEEECTTC
T ss_pred EEEEEEcCCcceEEEEECCCC
Confidence 589999999999999997554
No 123
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=54.09 E-value=1.6e+02 Score=28.44 Aligned_cols=142 Identities=11% Similarity=0.098 Sum_probs=66.3
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhh-HhhccCCHHHHHHHHHHHHHHHHHHh-----------------hcCCCccHHHHH
Q 004211 577 MERTKDRKNALESYVYEMRDKISN-IYRSFATESEREGISRNLRDTEEWLY-----------------EDGDDESENVYA 638 (768)
Q Consensus 577 ~~~~~~akN~LEs~iy~~r~~l~~-~~~~~~t~~e~~~l~~~l~~~~~WL~-----------------~~g~~a~~~~~~ 638 (768)
...-......+|++|......+.. .+. ..+.+..+.+..+....+.=|. ..+ ......+.
T Consensus 16 ~~~F~~~~~e~~~Wl~e~e~~l~~~~~~-g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~~~-~~~~~~I~ 93 (250)
T 1quu_A 16 AEKFRQKASTHETWAYGKEQILLQKDYE-SASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELD-YHDAVNVN 93 (250)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHCCCCS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHhcCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CcchhHHH
Confidence 344556667788888777777753 210 1233333333333322222111 111 12223445
Q ss_pred HHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 004211 639 ERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVVEAHSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDAD 718 (768)
Q Consensus 639 ~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~d 718 (768)
.|+.+|.....-+......+..+=...-.+...++.+. ..+...++++..|+.++...-.......|
T Consensus 94 ~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l~-------------~qF~~~a~~~~~Wl~~~e~~l~~~~~~~d 160 (250)
T 1quu_A 94 DRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLH-------------LEFAKRAAPFNNWMEGAMEDLQDMFIVHS 160 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHTTTTCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHhHHHHHHHHHHHHHhccccccCC
Confidence 55555555444444444443333222222222232222 13447888999999998875444333223
Q ss_pred CcccHHHHHHHHHHHH
Q 004211 719 PILWSTEIKRKSEALD 734 (768)
Q Consensus 719 P~~~~~di~~k~~~l~ 734 (768)
+- .+..+..+.+.+.
T Consensus 161 ~e-~v~~ll~~h~~~~ 175 (250)
T 1quu_A 161 IE-EIQSLITAHEQFK 175 (250)
T ss_dssp TT-THHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHH
Confidence 22 4544454444443
No 124
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=53.68 E-value=2.2e+02 Score=30.00 Aligned_cols=45 Identities=9% Similarity=0.138 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCC-ChHHHHHHHHhhc
Q 004211 308 SSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLF 356 (768)
Q Consensus 308 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~f 356 (768)
++-+..++.+.|-...... ..+|.|+++||-+ ..+.|++.+.+.+
T Consensus 310 ~d~f~yri~k~IGa~aa~L----ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 310 IKTFVHRIARHIAGHAASL----HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTC----SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHh----CCCCEEEECccccccCHHHHHHHHhhH
Confidence 3345556666665554333 3699999999999 9999999998776
No 125
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=53.60 E-value=1.6e+02 Score=31.56 Aligned_cols=58 Identities=14% Similarity=0.147 Sum_probs=39.8
Q ss_pred CHHHHHHHHHHHHHcC---CCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEe
Q 004211 150 TDVQRRAYLDAATIAG---LKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASY 214 (768)
Q Consensus 150 ~~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~ 214 (768)
...-.+.+.+|.+.-| ++++.++|+.+|+.++.++.. +...+-+=+|-||=-+.+-+.
T Consensus 159 G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~-------~~~~iglIlGTGtNa~y~e~~ 219 (445)
T 3hm8_A 159 GQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED-------PRCEIGLIVGTGTNACYMEEL 219 (445)
T ss_dssp TSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEEG
T ss_pred CCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC-------CCceEEEEEeCCceEEEEEec
Confidence 3445778888887653 568999999999999866532 345555557888665555444
No 126
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=53.55 E-value=1.1e+02 Score=33.04 Aligned_cols=131 Identities=13% Similarity=0.137 Sum_probs=0.0
Q ss_pred EEEEEcCccceEEEEEEcCC-c--eEEEeCCCCCccceEEEEeeCCceeecHHHHhhhhhCCcchHhHHHHhcCCCCCCh
Q 004211 3 VVGFDIGNENCVIAAVKQGG-M--LDVLLNDESKRETPTVVSFSEKQRFLGSAGAASAMMNPKSTISQVKRLLGRKFRED 79 (768)
Q Consensus 3 viGID~GTt~s~va~~~~g~-~--~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~llg~~~~~~ 79 (768)
++|||+|.||.+|++++-++ . +++....
T Consensus 70 ~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~------------------------------------------------- 100 (451)
T 1bdg_A 70 FLALDLGGTNYRVLSVTLEGKGKSPRIQERT------------------------------------------------- 100 (451)
T ss_dssp EEEEEESSSSEEEEEEEECC-CCCCEEEEEE-------------------------------------------------
T ss_pred EEEEEeCCCeEEEEEEecCCCCcceEEEEEE-------------------------------------------------
Q ss_pred HHHhhhccCCceeeecCCCCEEEEEEecCceeEecHHHHHHHHHHHHHHHHHh---hccCCCCeEEEEeCC---------
Q 004211 80 DVQKDLKLFPFETCESHDGGILIMLEYLGETHKFTPVQILGMLLSNLKQITEK---NIKIPISNCVIGVPC--------- 147 (768)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~---~~~~~~~~~VitVPa--------- 147 (768)
.........-+.+++...+...+.+.... ....-...+.++.|.
T Consensus 101 ------------------------~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~~~lG~tfsfPv~q~~~~~G~ 156 (451)
T 1bdg_A 101 ------------------------YCIPAEKMSGSGTELFKYIAETLADFLENNGMKDKKFDLGFTFSFPCVQKGLTHAT 156 (451)
T ss_dssp ------------------------ECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCCSSCEEEEEEECSCEEEETTTEEE
T ss_pred ------------------------EecCCcccCCCHHHHHHHHHHHHHHHHHhcCCCccccceEEEEeeEeccccCCCeE
Q ss_pred --CC----------CHHHHHHHHHHHHHcCCCc--eeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEE
Q 004211 148 --YL----------TDVQRRAYLDAATIAGLKP--LRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 148 --~~----------~~~qr~~l~~Aa~~AGl~~--~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 213 (768)
.| ...-.+.+.+|...-|+++ +.++|+.+|++++-++.. +..++.+=+|-|+=-+.+..
T Consensus 157 l~~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~-------~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 157 LVRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED-------PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp ECCCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEE
T ss_pred EeccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC-------CCcEEEEEEeCCcceEEEEc
No 127
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=53.28 E-value=7.2 Score=43.16 Aligned_cols=21 Identities=29% Similarity=0.551 Sum_probs=18.6
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||++++++++..+
T Consensus 8 ~~lgIDiGtts~k~~l~d~~G 28 (508)
T 3ifr_A 8 QVIGLDIGTTSTIAILVRLPD 28 (508)
T ss_dssp EEEEEEECSSEEEEEEEETTT
T ss_pred EEEEEEecCcceEEEEECCCC
Confidence 489999999999999998655
No 128
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=53.15 E-value=21 Score=42.41 Aligned_cols=58 Identities=14% Similarity=0.103 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHHHHc-CC--CceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEe
Q 004211 150 TDVQRRAYLDAATIA-GL--KPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASY 214 (768)
Q Consensus 150 ~~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~ 214 (768)
...-.+.|.+|...- |+ +++.++|+.+|++++.++.. +..++-+=+|-|+=-+.+...
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~-------~~~~iglIlGTG~na~y~e~~ 690 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE-------PTCEVGLIVGTGSNACYMEEM 690 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEET
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC-------CCcEEEEEEeCCeeEEEEEcC
Confidence 445577788887643 45 58999999999998876542 346666667888766655553
No 129
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=52.65 E-value=7.4 Score=42.94 Aligned_cols=21 Identities=19% Similarity=0.311 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||++++++++..+
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G 27 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKG 27 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTS
T ss_pred EEEEEEeCccceEEEEEcCCC
Confidence 489999999999999997654
No 130
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=51.94 E-value=8.5 Score=42.51 Aligned_cols=21 Identities=19% Similarity=0.321 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||++++++++..+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G 26 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRNG 26 (506)
T ss_dssp EEEEEEECSSEEEEEEEETTS
T ss_pred EEEEEEcCCCceEEEEECCCC
Confidence 489999999999999998654
No 131
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=51.79 E-value=7.8 Score=42.73 Aligned_cols=21 Identities=14% Similarity=0.200 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||++++++++..+
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g 24 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRES 24 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTC
T ss_pred EEEEEecCCchhEEEEECCCC
Confidence 589999999999999987644
No 132
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=51.72 E-value=7.8 Score=43.20 Aligned_cols=21 Identities=19% Similarity=0.374 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||.+++++++..+
T Consensus 11 ~~lgID~GTts~Ka~l~d~~G 31 (538)
T 4bc3_A 11 CCLGWDFSTQQVKVVAVDAEL 31 (538)
T ss_dssp EEEEEEECSSEEEEEEEETTC
T ss_pred EEEEEEEcCcCEEEEEECCCC
Confidence 489999999999999998654
No 133
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=51.33 E-value=7.7 Score=42.95 Aligned_cols=21 Identities=29% Similarity=0.498 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||++++++++..+
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G 26 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDG 26 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTS
T ss_pred EEEEEEeCCCceEEEEECCCC
Confidence 589999999999999987554
No 134
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=51.26 E-value=8.5 Score=42.64 Aligned_cols=21 Identities=24% Similarity=0.569 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEE-cCC
Q 004211 2 SVVGFDIGNENCVIAAVK-QGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~-~g~ 22 (768)
.++|||+|||++++++++ .++
T Consensus 6 ~~lgIDiGtts~ka~l~d~~~G 27 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTDAETG 27 (515)
T ss_dssp EEEEEEECSSEEEEEEEETTTC
T ss_pred EEEEEEeccccEEEEEEECCCC
Confidence 489999999999999998 544
No 135
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=50.76 E-value=6.5 Score=43.14 Aligned_cols=21 Identities=14% Similarity=0.289 Sum_probs=17.9
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||++++++++..+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G 27 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDG 27 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTS
T ss_pred eEEEEEcCCCCeEEEEEECCC
Confidence 479999999999999998554
No 136
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=50.16 E-value=9.2 Score=38.21 Aligned_cols=21 Identities=14% Similarity=0.227 Sum_probs=18.9
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.+++||+|+|+++.++++.+.
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 489999999999999998765
No 137
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=50.06 E-value=6.5 Score=43.24 Aligned_cols=20 Identities=15% Similarity=0.290 Sum_probs=17.5
Q ss_pred eEEEEEcCccceEEEEEEcC
Q 004211 2 SVVGFDIGNENCVIAAVKQG 21 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g 21 (768)
.++|||+|||++++++++..
T Consensus 5 ~~lgiDiGtts~k~~l~d~~ 24 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARYE 24 (489)
T ss_dssp EEEEEEECSSEEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEEec
Confidence 48999999999999998743
No 138
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=50.01 E-value=9 Score=43.07 Aligned_cols=21 Identities=24% Similarity=0.423 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEEc-CC
Q 004211 2 SVVGFDIGNENCVIAAVKQ-GG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~-g~ 22 (768)
.+||||+|||++++++++. .+
T Consensus 6 ~~lgIDiGTts~Ka~l~d~~~G 27 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDLSNG 27 (572)
T ss_dssp EEEEEEECSSEEEEEEEETTTC
T ss_pred EEEEEecCCcceEEEEEECCCC
Confidence 5899999999999999985 44
No 139
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=49.76 E-value=13 Score=38.29 Aligned_cols=70 Identities=13% Similarity=0.021 Sum_probs=39.3
Q ss_pred cHHHHHHHHHHHH----HHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCC-C--CC-cCCchhHHH
Q 004211 300 RREEFEKLSSSLL----ERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNRE-P--GR-TINASECVA 371 (768)
Q Consensus 300 tr~~fe~~~~~~~----~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~-v--~~-~~n~~eava 371 (768)
+.++.+++.+.+. +.|.+.+.+++.+.++ ..|+.+||+ +++-..+.+.++.. + .. +.+.+-+-|
T Consensus 244 ~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~-----~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vapA 315 (334)
T 3cet_A 244 SEIDAENIAKNYYELWKELILENVENVAEKYGS-----KKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATPS 315 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccCH
Confidence 5566666666554 4455555555555443 369999987 46655554432211 0 01 223566778
Q ss_pred hhHHHH
Q 004211 372 RGCALQ 377 (768)
Q Consensus 372 ~GAa~~ 377 (768)
+|+|++
T Consensus 316 ~avA~l 321 (334)
T 3cet_A 316 FAVAEL 321 (334)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888855
No 140
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=49.47 E-value=1.3e+02 Score=32.41 Aligned_cols=58 Identities=14% Similarity=0.069 Sum_probs=40.4
Q ss_pred CHHHHHHHHHHHHHcC---CCceeeccchHHHHHHhhhcccCCCCCCCcEEEEEEeCCceEEEEEEEe
Q 004211 150 TDVQRRAYLDAATIAG---LKPLRLMHDCTATALGYGIYKTDFSNVGPTYVVFVDIGHCDTQVCVASY 214 (768)
Q Consensus 150 ~~~qr~~l~~Aa~~AG---l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~~ 214 (768)
...-.+.+++|.+.-| ++++.++|+.+|..++.++.. +...+-+=+|-||=-+.+-+.
T Consensus 183 G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~-------~~~~iGlI~GTGtNa~Y~E~~ 243 (470)
T 3f9m_A 183 GNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED-------HQCEVGMIVGTGCNACYMEEM 243 (470)
T ss_dssp TSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC-------CCceEEEEEecCCceEEeeec
Confidence 4455788889988877 458889999999988776532 334444446888765554444
No 141
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=48.85 E-value=9.3 Score=42.39 Aligned_cols=21 Identities=10% Similarity=0.164 Sum_probs=18.4
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||++++++++..+
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G 47 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQ 47 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTS
T ss_pred eEEEEEeCCcceEEEEECCCC
Confidence 489999999999999997554
No 142
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=47.33 E-value=1.1e+02 Score=32.22 Aligned_cols=46 Identities=13% Similarity=0.184 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCC-ChHHHHHHHHhhcC
Q 004211 308 SSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLFN 357 (768)
Q Consensus 308 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~fg 357 (768)
++-+..++.+.|-......| ++|.|+++||-+ ..+.|++.+.+.++
T Consensus 303 ~d~f~yriak~Iga~aa~LG----~vDaIVfTGGIgEns~~vr~~I~~~l~ 349 (398)
T 4ijn_A 303 YDVYIHRLRKYIGAYMAVLG----RTDVISFTAGVGENVPPVRRDALAGLG 349 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHS----SCCEEEEEHHHHHHCHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCcEEEECCccccccHHHHHHHHHHHh
Confidence 34445555555544443332 689999999988 56889999987763
No 143
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=47.16 E-value=9.4 Score=41.89 Aligned_cols=20 Identities=20% Similarity=0.569 Sum_probs=17.5
Q ss_pred EEEEEcCccceEEEEEEcCC
Q 004211 3 VVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 3 viGID~GTt~s~va~~~~g~ 22 (768)
++|||+|||++++++++..+
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g 21 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQG 21 (484)
T ss_dssp EEEEEECSSEEEEEEECTTS
T ss_pred EEEEEecCcccEEEEECCCC
Confidence 69999999999999987544
No 144
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=46.87 E-value=23 Score=38.24 Aligned_cols=44 Identities=20% Similarity=0.335 Sum_probs=26.2
Q ss_pred ceeeccchHHHHHH-----hhhcccCCCCCCCcEEEEEEeCCceEEEEEEE
Q 004211 168 PLRLMHDCTATALG-----YGIYKTDFSNVGPTYVVFVDIGHCDTQVCVAS 213 (768)
Q Consensus 168 ~~~li~Ep~Aaal~-----y~~~~~~~~~~~~~~vlv~D~GggT~dvsv~~ 213 (768)
.+++|+...=+.++ |.+.. +.......+.++|||||++.++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~--l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGR--FKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTT--TC---CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhcc--ccCCCCCceEEEecCCCceEEEecc
Confidence 35777655544443 33321 1111235688999999999998764
No 145
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=46.78 E-value=1.3e+02 Score=26.64 Aligned_cols=82 Identities=15% Similarity=0.173 Sum_probs=43.5
Q ss_pred cHHHHHHHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc
Q 004211 633 SENVYAERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVVEAHSLPSKVRDAVIDECSKAEEWLREKVTQQDS 712 (768)
Q Consensus 633 ~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~ 712 (768)
+.+.+.+++..|......+..+..++..+ |..++ .+..|. ..+++...|++++...- .
T Consensus 13 ~a~~I~~r~~~l~~r~~~L~~~a~~R~~~------Le~s~-~l~~F~--------------~d~~el~~Wi~ek~~~~-~ 70 (149)
T 3f31_A 13 TAEDIQERRQQVLDRYHRFKELSTLRRQK------LEDSY-RFQFFQ--------------RDAEELEKWIQEKLQIA-S 70 (149)
T ss_dssp CTTHHHHHHHHHHHHTCSCHHHHHHHHHH------HHHHH-HHHHHH--------------HHHHHHHHHHHHHHHHT-T
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHH-HHHHHH--------------HHHHHHHHHHHHHHHHH-c
Confidence 44566677777765555555544443322 22222 123333 66778888998887642 2
Q ss_pred CCCCCCCcccHHHHHHHHHHHHHHh
Q 004211 713 LPKDADPILWSTEIKRKSEALDLTC 737 (768)
Q Consensus 713 ~~~~~dP~~~~~di~~k~~~l~~~~ 737 (768)
-+.+.|| -.+.....|.+.++..+
T Consensus 71 ~~~~~d~-~~v~~~l~kH~afe~El 94 (149)
T 3f31_A 71 DENYKDP-TNLQGKLQKHQAFEAEV 94 (149)
T ss_dssp SCSSCSS-SCHHHHHHHHHHHHHHH
T ss_pred CcccCCH-HHHHHHHHHHHHHHHHH
Confidence 3455565 33444445555555544
No 146
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=45.48 E-value=60 Score=25.00 Aligned_cols=45 Identities=18% Similarity=0.288 Sum_probs=35.1
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHhhccCC
Q 004211 562 EAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIYRSFAT 607 (768)
Q Consensus 562 ~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~t 607 (768)
.+.++.+++..+|...++.+....+.|+-|-.+|..|+. |..+++
T Consensus 27 ~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDK-frSVl~ 71 (72)
T 3nmd_A 27 ALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDK-YRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhccCC
Confidence 344567788889999999999999999999999988843 555443
No 147
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=45.37 E-value=2.8e+02 Score=29.69 Aligned_cols=49 Identities=6% Similarity=-0.048 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHh
Q 004211 688 VRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTC 737 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 737 (768)
.+..+...+.+...|++++...-....-.+ ....+.-+..|-+.|+..+
T Consensus 94 ~L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd-~l~dv~~l~~khq~l~~EL 142 (450)
T 3r6n_A 94 QLQNIIQATSREIMWINDCEEEELLYDWSD-KNTNIAQKQEAFSIRMSQL 142 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCST-TCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccCc-ChhhHHHHHHHHHHHHHHH
Confidence 466777889999999999987655543222 2223334455555555544
No 148
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=45.19 E-value=99 Score=37.37 Aligned_cols=18 Identities=22% Similarity=0.366 Sum_probs=0.0
Q ss_pred HHhhHHHHHHHHHHHHhh
Q 004211 583 RKNALESYVYEMRDKISN 600 (768)
Q Consensus 583 akN~LEs~iy~~r~~l~~ 600 (768)
.+..||.-|-+++.+|++
T Consensus 922 ~~~~LE~kl~eLq~rL~~ 939 (1080)
T 2dfs_A 922 LHIGLENKIMQLQRKIDE 939 (1080)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 357788888888887753
No 149
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=44.79 E-value=11 Score=41.68 Aligned_cols=21 Identities=19% Similarity=0.333 Sum_probs=18.3
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|||++++++++..+
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G 23 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSG 23 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTS
T ss_pred EEEEEecCCcceEEEEECCCC
Confidence 479999999999999987654
No 150
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=42.71 E-value=1.4e+02 Score=24.60 Aligned_cols=85 Identities=7% Similarity=0.136 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHhhc-------C-CCccHHHHHHHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 004211 611 REGISRNLRDTEEWLYED-------G-DDESENVYAERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVVEAH 682 (768)
Q Consensus 611 ~~~l~~~l~~~~~WL~~~-------g-~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~ 682 (768)
...+...++++..||.+- . -..+...++..+++.+.+..-|..+... +..+ ...+..++...
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~-------v~~v---~~~g~~L~~~~ 73 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSS-------VGSV---LQAGNQLMTQG 73 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHH-------HHHH---HHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-------HHHH---HHHHHHHHHhC
Confidence 456777888888888541 1 1234556666666666655555443222 2222 22233344222
Q ss_pred CCChhhHHHHHHHHHHHHHHHHH
Q 004211 683 SLPSKVRDAVIDECSKAEEWLRE 705 (768)
Q Consensus 683 ~~~~~e~~~v~~~~~~~~~Wl~~ 705 (768)
..+.++...|...++....-|+.
T Consensus 74 ~~~~~~~~~i~~~l~~l~~rw~~ 96 (118)
T 3uul_A 74 TLSDEEEFEIQEQMTLLNARWEA 96 (118)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHH
Confidence 35566666666666666554444
No 151
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=41.76 E-value=26 Score=35.69 Aligned_cols=49 Identities=10% Similarity=0.072 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004211 307 LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
+.+...+.+...++++|+++|+++++|+.|+..|+++++ -+.+.+.||.
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~ 260 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGM 260 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 334455677888999999999999999999999998765 3567888874
No 152
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=41.45 E-value=54 Score=27.38 Aligned_cols=25 Identities=12% Similarity=0.048 Sum_probs=19.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhc
Q 004211 688 VRDAVIDECSKAEEWLREKVTQQDS 712 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q~~ 712 (768)
++....+.++++..||.++......
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~ 27 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQE 27 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5667778889999999887665554
No 153
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=40.21 E-value=1.8e+02 Score=27.46 Aligned_cols=25 Identities=16% Similarity=0.298 Sum_probs=19.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhc
Q 004211 688 VRDAVIDECSKAEEWLREKVTQQDS 712 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q~~ 712 (768)
.+..+...+++...|++++...-..
T Consensus 121 ~l~~F~~~~~~~~~Wi~eke~~~~s 145 (224)
T 2iak_A 121 TLHNFVTRATNELIWLNEKEESEVA 145 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5566667888889999998886443
No 154
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=38.83 E-value=1.7e+02 Score=30.43 Aligned_cols=45 Identities=11% Similarity=0.063 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCC-ChHHHHHHHHhhc
Q 004211 308 SSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLF 356 (768)
Q Consensus 308 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~f 356 (768)
++-+..++.+.|-......+ .+|.|+++||-+ ..+.|++.+.+.+
T Consensus 293 ~d~f~yri~k~IGa~aa~L~----gvDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 293 IEIFSHRVAKFVASYMIYFN----KLDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp HHHHHHHHHHHHHHHGGGCS----SCCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCCEEEECCccccCcHHHHHHHHhhc
Confidence 33455556555555443322 699999999988 7798999988765
No 155
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=38.24 E-value=67 Score=34.90 Aligned_cols=30 Identities=10% Similarity=0.195 Sum_probs=24.0
Q ss_pred CCcEEEEEEeCCceEEEEEEEeeCC-eEEEE
Q 004211 193 GPTYVVFVDIGHCDTQVCVASYENG-HMKIL 222 (768)
Q Consensus 193 ~~~~vlv~D~GggT~dvsv~~~~~~-~~~vl 222 (768)
+...+|.+|+||.++-+.++.+.++ .+++.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~ 108 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGNHDFDTT 108 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESSSCEEEE
T ss_pred cceEEEEEEecCCeEEEEEEEECCCCceEEE
Confidence 3457999999999999999999764 34444
No 156
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=37.17 E-value=83 Score=34.00 Aligned_cols=52 Identities=17% Similarity=0.287 Sum_probs=33.2
Q ss_pred CCcEEEEEEeCCceEEEEEEEeeCCe-----EEEEEEeCCCC----CchhhHHHHHHHHHHHHH
Q 004211 193 GPTYVVFVDIGHCDTQVCVASYENGH-----MKILSHAFDES----LGGRDFDEVLSSYFAAQF 247 (768)
Q Consensus 193 ~~~~vlv~D~GggT~dvsv~~~~~~~-----~~vl~~~~~~~----lGG~~~d~~l~~~l~~~~ 247 (768)
+...+|.+|+||.++-|.+|++.++. +++....+... .| . ...|++|+.+.+
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~~l~~g-t--~~eLFd~IA~~i 135 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTG-T--AEMLFDYISECI 135 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHHHHSS-B--HHHHHHHHHHHH
T ss_pred cceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCChHhccC-C--HHHHHHHHHHHH
Confidence 45679999999999999999998643 55444433222 12 1 355666666543
No 157
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=36.60 E-value=1.2e+02 Score=32.64 Aligned_cols=52 Identities=12% Similarity=-0.029 Sum_probs=32.6
Q ss_pred CCcEEEEEEeCCceEEEEEEEeeCCe---EEEEEEeCCCCC---chhhHHHHHHHHHH
Q 004211 193 GPTYVVFVDIGHCDTQVCVASYENGH---MKILSHAFDESL---GGRDFDEVLSSYFA 244 (768)
Q Consensus 193 ~~~~vlv~D~GggT~dvsv~~~~~~~---~~vl~~~~~~~l---GG~~~d~~l~~~l~ 244 (768)
+...++.+|+||.++-+.++...+.. +......-...+ +|..+=..|++.+.
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~ 116 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNA 116 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHH
Confidence 45668999999999999999987664 222222222232 55555555555444
No 158
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=36.09 E-value=1.8e+02 Score=23.89 Aligned_cols=86 Identities=9% Similarity=0.124 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHhhc--------CCCccHHHHHHHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 004211 610 EREGISRNLRDTEEWLYED--------GDDESENVYAERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVVEA 681 (768)
Q Consensus 610 e~~~l~~~l~~~~~WL~~~--------g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~ 681 (768)
+...|...++++..||.+- .-..+...++..+...+.+..-|..+... +..+ ...+..++..
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~-------v~~~---~~~g~~L~~~ 72 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGR-------VGNI---LQLGSKLIGT 72 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHH-------HHHH---HHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHH-------HHHH---HHHHHHHHHc
Confidence 3466777888888888541 11234455555555555555444443221 1111 1222233322
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHH
Q 004211 682 HSLPSKVRDAVIDECSKAEEWLRE 705 (768)
Q Consensus 682 ~~~~~~e~~~v~~~~~~~~~Wl~~ 705 (768)
...+.++...|...++....-|+.
T Consensus 73 ~~~~~~~~~~i~~~l~~l~~rw~~ 96 (119)
T 3uun_A 73 GKLSEDEETEVQEQMNLLNSRWEC 96 (119)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 234555555566665555544444
No 159
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=35.08 E-value=2.4e+02 Score=26.32 Aligned_cols=23 Identities=9% Similarity=-0.083 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Q 004211 688 VRDAVIDECSKAEEWLREKVTQQ 710 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q 710 (768)
++..+...++++..|+.++....
T Consensus 109 ~~~~F~~~~~e~~~Wl~ek~~~l 131 (218)
T 3edu_A 109 DLHRYFYTGAEILGLIDEKHREL 131 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 56677788999999999977754
No 160
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=34.72 E-value=3.5e+02 Score=26.86 Aligned_cols=47 Identities=17% Similarity=0.131 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHH
Q 004211 689 RDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLT 736 (768)
Q Consensus 689 ~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~ 736 (768)
+..+...+.+...|+.++...-...+.. +.+-.+..+..+.+.+.+.
T Consensus 112 l~~f~~~~~~l~~Wl~~~e~~l~~~~~g-~d~~~v~~l~~~~~~f~~e 158 (326)
T 3kbt_A 112 LFQLKRETDDLEQWISEKELVASSPEMG-QDFDHVTLLRDKFRDFARE 158 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCC-SSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCC-CCHHHHHHHHHHHHHHHHH
Confidence 3455677888999999977754443322 2333444444444444443
No 161
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=34.46 E-value=75 Score=32.16 Aligned_cols=48 Identities=17% Similarity=0.110 Sum_probs=32.8
Q ss_pred CcCEEEEecCCCCh-----HHHHHHHHhhcCC-------CCCCcCCchhHHHhhHHHHhh
Q 004211 332 KIHSVELVGSGSRI-----PAISRMLNSLFNR-------EPGRTINASECVARGCALQCA 379 (768)
Q Consensus 332 ~i~~V~LvGG~sri-----p~v~~~l~~~fg~-------~v~~~~n~~eava~GAa~~a~ 379 (768)
+.+.|+|-||.+.. +.+++.+++.+.. ++....-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 45778888887764 5677777776521 122233457899999998874
No 162
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=34.36 E-value=35 Score=34.80 Aligned_cols=47 Identities=17% Similarity=0.118 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004211 309 SSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 309 ~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
+-....+...++++|+++|+++++|+.|++.|+++++ -+.+.+.||.
T Consensus 216 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~ 262 (322)
T 1ub7_A 216 KFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGL 262 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCC
Confidence 3445677788999999999999999999999988765 3457788874
No 163
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=33.70 E-value=37 Score=34.32 Aligned_cols=46 Identities=22% Similarity=0.283 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004211 310 SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 310 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
.....+...++++|+++|+++++|+.|++.|+++++ -+.+.+.||.
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~ 252 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNI 252 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCC
Confidence 345567788999999999999999999999998765 3457778874
No 164
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=33.26 E-value=60 Score=34.08 Aligned_cols=48 Identities=8% Similarity=-0.032 Sum_probs=32.4
Q ss_pred CcCEEEEecCCCChHH-HHHHHHhhcCC----CCCCcCCchhHHHhhHHHHhh
Q 004211 332 KIHSVELVGSGSRIPA-ISRMLNSLFNR----EPGRTINASECVARGCALQCA 379 (768)
Q Consensus 332 ~i~~V~LvGG~srip~-v~~~l~~~fg~----~v~~~~n~~eava~GAa~~a~ 379 (768)
+++.|+|.||.+..+. +.+.+++.+.. .+......+.+.++||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5788999999886543 66777666642 222233445699999998764
No 165
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=32.90 E-value=69 Score=26.66 Aligned_cols=25 Identities=12% Similarity=0.114 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhc
Q 004211 688 VRDAVIDECSKAEEWLREKVTQQDS 712 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q~~ 712 (768)
++..+.+.+++...||.++......
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~ 27 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQA 27 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5677788889999999887665443
No 166
>2y6x_A PSB27, photosystem II 11 KD protein; photosynthesis; 1.60A {Thermosynechococcus elongatus}
Probab=32.87 E-value=2.2e+02 Score=23.98 Aligned_cols=91 Identities=12% Similarity=0.115 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHhHhHHHHhhHhH--HHHHHHHHHHHHHHHHHHHHHH---hCCCCh
Q 004211 612 EGISRNLRDTEEWLYEDGDDESENVYAERLEDLKKLVDPIEGRYKDE--EARAQATGALLKCAMDYRKVVE---AHSLPS 686 (768)
Q Consensus 612 ~~l~~~l~~~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~--~~rp~a~~~l~~~l~~~~~~~~---~~~~~~ 686 (768)
+.-...++.+.+-|..+.++....+ -.+++++.+.-+..||.-. -..-.....|+++|+.+..... ..-+++
T Consensus 14 ~dT~~Vv~~lr~~l~l~~d~~~~~~---a~~~ar~~ind~vsrYRr~~~v~g~~Sfttm~tAlNaLAGHY~s~g~~PlPe 90 (113)
T 2y6x_A 14 EDTLALISSLREAIALPENDPNKKA---AQAEARKKLNDFFALYRRDDSLRSLSSFMTMQTALNSLAGHYSSYPNRPLPE 90 (113)
T ss_dssp HHHHHHHHHHHHHHHSCTTCTTHHH---HHHHHHHHHHHHHHHHTTCHHHHTSHHHHHHHHHHHHHHHHHHHCTTSCCCH
T ss_pred HHHHHHHHHHHHHHcCCCCCccHHH---HHHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHHHHHHHhhcCCCCCCH
Confidence 4445566666777766555555544 4467777788888888743 3455667778888876655541 122999
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 004211 687 KVRDAVIDECSKAEEWLRE 705 (768)
Q Consensus 687 ~e~~~v~~~~~~~~~Wl~~ 705 (768)
+-++.|...++.++.-|..
T Consensus 91 k~k~Rl~~el~~AE~al~R 109 (113)
T 2y6x_A 91 KLKARLEQEFKQVELALDR 109 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999888764
No 167
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=31.37 E-value=3.3e+02 Score=25.41 Aligned_cols=47 Identities=21% Similarity=0.165 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHH
Q 004211 688 VRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDL 735 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~ 735 (768)
.+..+...+.+...|++++...-..... -++.-.+.-+..|.+.|+.
T Consensus 106 ~L~~f~~~~~~~~~Wl~eke~~~~s~d~-g~~~~~v~~l~~k~~~f~~ 152 (210)
T 3pdy_A 106 SLHSFVAAATKELMWLNEKEEEEVGFDW-SDRNTNMTAKKESYSALMR 152 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC-STTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccc-CCCchhHHHHHHHHHHHHH
Confidence 4556668888999999998886555332 2344445555555555444
No 168
>4ehp_B Catenin alpha-1; adherens junctions, vinculin binding site, vinculin binding helix bundle, cell adhesion; 2.66A {Homo sapiens}
Probab=30.88 E-value=36 Score=28.69 Aligned_cols=78 Identities=13% Similarity=0.165 Sum_probs=48.0
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhCC--CChhhHHHHHHHHHHHHHHHHHHHH----hhhcCCCCCCCcccHHHHHHH
Q 004211 656 KDEEARAQATGALLKCAMDYRKVVEAHS--LPSKVRDAVIDECSKAEEWLREKVT----QQDSLPKDADPILWSTEIKRK 729 (768)
Q Consensus 656 ~e~~~rp~a~~~l~~~l~~~~~~~~~~~--~~~~e~~~v~~~~~~~~~Wl~~~~~----~q~~~~~~~dP~~~~~di~~k 729 (768)
.+...||..-+.|...|..+..+. ++ -.++.++.|...|+.+.+=|.+.+. .+......++--.-+.-+-+|
T Consensus 26 ~~~~~r~~Lee~LE~Iisgaa~~a--DS~~Tr~e~RerIv~eCnavRqaLQdLlseym~~~g~ke~se~L~~aI~km~~k 103 (111)
T 4ehp_B 26 SEERFRPSLEERLESIISGAALMA--DSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKK 103 (111)
T ss_dssp HHHSSSCCHHHHHHHHHHHHTCSC--CCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCCCCCHHHHHHHHHHHH
T ss_pred cccccchhHHHHHHHHHHHHHHHH--hhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHH
Confidence 344447766677777676665555 44 4467788999999888766655544 465555555444444455555
Q ss_pred HHHHHH
Q 004211 730 SEALDL 735 (768)
Q Consensus 730 ~~~l~~ 735 (768)
.++|.+
T Consensus 104 t~dLrR 109 (111)
T 4ehp_B 104 TRDLRR 109 (111)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555544
No 169
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=29.88 E-value=97 Score=31.20 Aligned_cols=22 Identities=23% Similarity=0.370 Sum_probs=19.1
Q ss_pred CeEEEEEcCccceEEEEEEcCC
Q 004211 1 MSVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 1 m~viGID~GTt~s~va~~~~g~ 22 (768)
|.++|||+|.|++++++++..+
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G 24 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDG 24 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTS
T ss_pred cEEEEEEECcceeEEEEEECCC
Confidence 5689999999999999997554
No 170
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=29.65 E-value=21 Score=35.99 Aligned_cols=46 Identities=13% Similarity=0.041 Sum_probs=28.1
Q ss_pred CcCEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhh
Q 004211 332 KIHSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCA 379 (768)
Q Consensus 332 ~i~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~ 379 (768)
+...|+|.||.+.. +.+.|++.+..+......+..+.++||++++.
T Consensus 232 ~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 232 KQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred CCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 45678888887765 55556555542111112345678899998764
No 171
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=27.98 E-value=32 Score=34.25 Aligned_cols=20 Identities=30% Similarity=0.665 Sum_probs=17.8
Q ss_pred EEEEEcCccceEEEEEEcCC
Q 004211 3 VVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 3 viGID~GTt~s~va~~~~g~ 22 (768)
++.||+|+|+++.++++++.
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 58899999999999998665
No 172
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=27.60 E-value=1.5e+02 Score=28.86 Aligned_cols=167 Identities=11% Similarity=0.075 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHHhhHh------hccCCHHHHHHHHHHHHHHHHHHhh
Q 004211 554 GMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKISNIY------RSFATESEREGISRNLRDTEEWLYE 627 (768)
Q Consensus 554 ~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~------~~~~t~~e~~~l~~~l~~~~~WL~~ 627 (768)
+.+.+-..++......+ ..+.....++.|+.|+-|.-++|..+...+ ..-..++=+..+...++++..=|..
T Consensus 66 p~~ee~~~~l~~~~~~l--r~~l~kd~ee~r~~l~Py~~el~~~~~~~~eelr~~L~P~~eel~~~~~~~~eel~~~L~p 143 (243)
T 2a01_A 66 PVTQEFWDNLEKETEGL--RQEMSKDLEEVKAKVQPYLDDFQKKWQEEMELYRQKVEPLRAELQEGARQKLHELQEKLSP 143 (243)
T ss_dssp HHHHHHHHHHHHHHHHH--HHTSSCCSSCSSTTHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCCSCCS
T ss_pred CcHHHHHHHhhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh
Q ss_pred cCCCccHHHHHHHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHHHHHH
Q 004211 628 DGDDESENVYAERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVVEAHSLPSKVRDAVIDECSKAEEWLREKV 707 (768)
Q Consensus 628 ~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~ 707 (768)
-+ ..-.+-+..++.+|+....|....++. .+...+..++..+ ..+.++=..++...++++..++.-..
T Consensus 144 ~~-eelr~kl~~~veelk~~l~P~~ee~r~---------kl~~~~~el~~~l--~p~~~e~~~kl~~~~e~lr~~l~p~~ 211 (243)
T 2a01_A 144 LG-EEMRDRARAHVDALRTHLAPYSDELRQ---------RLAARLEALKENG--GARLAEYHAKATEHLSTLSEKAKPAL 211 (243)
T ss_dssp ST-HHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHH--HHTTTSSSCCHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhhHHHHHH---------HHHHHHHHHHHhc--chhHHHHHHHHHHHHHHHHHHhHHHH
Q ss_pred HhhhcCCCCCCCcccHHHHHHHHHHHHHHhhh
Q 004211 708 TQQDSLPKDADPILWSTEIKRKSEALDLTCKC 739 (768)
Q Consensus 708 ~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~ 739 (768)
+.-.. --.=.+.+|..++..+-..+++
T Consensus 212 e~lk~-----~l~p~~e~~~~~l~~~~e~~~~ 238 (243)
T 2a01_A 212 EDLRQ-----GLLPVLESFKVSFLSALEEYTK 238 (243)
T ss_dssp HHSSS-----CSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-----HhHHHHHHHHHHHHHHHHHHHH
No 173
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=26.83 E-value=5.5e+02 Score=26.59 Aligned_cols=120 Identities=11% Similarity=0.164 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHH-----------H
Q 004211 612 EGISRNLRDTEEWLYEDGDDESENVYAERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVV-----------E 680 (768)
Q Consensus 612 ~~l~~~l~~~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~-----------~ 680 (768)
+.|..+-.+++.-|....-+...+-|-.-.-+|++-.- |..|......|...++.++.--+..+..+ +
T Consensus 101 ~kl~~~~~eL~~ai~~~dl~~a~~~YHklsyeikk~av-ll~RVYG~stRe~il~~fk~pA~~l~~~~~y~Itv~~~~~~ 179 (412)
T 2ra1_A 101 TKLDKMRQELKAAVDAKDLKKAEELYHKISYELKTRTV-ILDRVYGQSTRELLRSTFKADAQALRDRLIYDITVAMKARE 179 (412)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTH-HHHTSSCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhccHHHHHHHhhhhhHhhhhcEE-EEecccChhHHHHHHHHhhchHHHHHHHhhhHHHHHHHHHH
Confidence 34444444555555443333345667777778877665 99999999999999998876333222211 0
Q ss_pred -hCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhhcCCC
Q 004211 681 -AHSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCIMRSN 744 (768)
Q Consensus 681 -~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i~kpk 744 (768)
+..+.+.++.+....+++...||.. -.|- ..+||..+.+.........+-||
T Consensus 180 ~~~a~~~g~l~~a~~~l~~v~~~l~k----------v~d~--FkaeL~~aa~~a~~aYeaa~tpK 232 (412)
T 2ra1_A 180 AQDAVKAGNLDKAKAALDQVNQYVSK----------VTDA--FKAELQKAAQDAKAAYEAALTPK 232 (412)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHGGG----------CCST--THHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHh----------hhHH--HHHHHHHhhhhhhhhhccccCcc
Confidence 0225667788888999999999854 1233 45788888888777666555444
No 174
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=26.24 E-value=48 Score=34.04 Aligned_cols=45 Identities=18% Similarity=0.166 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004211 311 LLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 311 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
....+...++++|+++|+++++|+.|++.|++.++ -+.+.+.||.
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~ 273 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGV 273 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCC
Confidence 45667788999999999999999999999988765 3457777774
No 175
>1ywm_A C protein alpha-antigen; beta sandwich, fibronectin fold, antiparallel three-helix BU surface active protein; 1.86A {Streptococcus agalactiae} PDB: 2o0i_1
Probab=26.22 E-value=2.5e+02 Score=25.20 Aligned_cols=53 Identities=17% Similarity=0.187 Sum_probs=36.8
Q ss_pred HHHHHhCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccHHHHHHHHHHHHHHhhhhc
Q 004211 676 RKVVEAHSLPSKVRDAVIDECSKAEEWLREKVTQQDSLPKDADPILWSTEIKRKSEALDLTCKCIM 741 (768)
Q Consensus 676 ~~~~~~~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~i~ 741 (768)
++.+++-+|++.-+.+|...++..+.=++. -|+++ .||..|+.++..+-+.|.
T Consensus 134 ~kka~Dpkws~~srdeVl~~ld~Ik~DIDn-------nPKtq------~dI~nkI~eV~elEK~Lv 186 (200)
T 1ywm_A 134 RTNANDPKWTEESRTEVLTGLDTIKTDIDN-------NPKTQ------TDIDSKIVEVNELEKLLV 186 (200)
T ss_dssp HHHHTSTTBCHHHHHHHHHHHHHHHHHHHH-------SCCCH------HHHHHHHHHHHHHHTTCC
T ss_pred HhcccCCCCCcccHHHHHHHHHHHhhhhcc-------CCccc------cchHHHhhhhhhhhhccc
Confidence 334433459999899888888777766655 45554 788888888777655444
No 176
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=25.98 E-value=27 Score=39.24 Aligned_cols=25 Identities=32% Similarity=0.574 Sum_probs=22.6
Q ss_pred cCEEEEecCCCChHHHHHHHHhhcC
Q 004211 333 IHSVELVGSGSRIPAISRMLNSLFN 357 (768)
Q Consensus 333 i~~V~LvGG~srip~v~~~l~~~fg 357 (768)
.+.|++|||+|.+|++.-.|.+.+.
T Consensus 501 y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHHH
Confidence 4689999999999999999998885
No 177
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=25.10 E-value=1.5e+02 Score=31.34 Aligned_cols=48 Identities=8% Similarity=0.017 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCC-ChHHHHHHHHhhcC
Q 004211 307 LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLFN 357 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~fg 357 (768)
.++-+..++.+.|-......+ ..+|.|+++||-+ ..+.||+.+.+.++
T Consensus 317 A~d~f~yri~k~IGa~aa~L~---G~vDaIVFTgGIGEns~~vR~~v~~~l~ 365 (415)
T 3sk3_A 317 AMDVYCHRLAKYIGSYTALMD---GRLDAVVFTGGIGENAAMVRELSLGKLG 365 (415)
T ss_dssp HHHHHHHHHHHHHHHGGGGST---TCCCEEEEEHHHHTTCHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHHHHHHHHhC---CCCCEEEECCccccCCHHHHHHHHhhch
Confidence 444555666666655544332 1489999999987 79999999987663
No 178
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=24.96 E-value=6.5e+02 Score=26.78 Aligned_cols=126 Identities=10% Similarity=0.041 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHhhc---------CCC-ccHHHHHHHHHHHHHhHhHHHHhhHhHHHHHHHH--------HHHHHH
Q 004211 610 EREGISRNLRDTEEWLYED---------GDD-ESENVYAERLEDLKKLVDPIEGRYKDEEARAQAT--------GALLKC 671 (768)
Q Consensus 610 e~~~l~~~l~~~~~WL~~~---------g~~-a~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~--------~~l~~~ 671 (768)
..-.|...+++.+.||.+- |++ .+.....+|.+.|+.-...-..|+..-..+.+.+ ..++..
T Consensus 94 ~L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~dv~~l~~khq~l~~EL~~~e~~i~~v~~~G~~Li~~~Hpas~~I~~r 173 (450)
T 3r6n_A 94 QLQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAY 173 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccCcChhhHHHHHHHHHHHHHHHHHchHHHHHHHHHHHHHHHcCCCCchHHHHH
Confidence 3556777778888888652 221 2344455566665544443344444433333322 112222
Q ss_pred HH-------HHHHHHHh---CCCChhhHHHHHHHHHHHHHHHHHHHHhhhcC--CCCCCCcccHHHHHHHHHHHHH
Q 004211 672 AM-------DYRKVVEA---HSLPSKVRDAVIDECSKAEEWLREKVTQQDSL--PKDADPILWSTEIKRKSEALDL 735 (768)
Q Consensus 672 l~-------~~~~~~~~---~~~~~~e~~~v~~~~~~~~~Wl~~~~~~q~~~--~~~~dP~~~~~di~~k~~~l~~ 735 (768)
+. .+...+.. ..-...+.......++++++||.++...-... +-..+..-.+..+..|...+++
T Consensus 174 ~~~L~~~W~~L~~l~~~R~~~L~~a~~~~QF~~Da~EaesWL~eke~~l~s~y~~D~g~d~~~~e~LLkkh~~le~ 249 (450)
T 3r6n_A 174 MDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKERE 249 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcccccCcCCCCHHHHHHHHHHHHHHHH
Confidence 22 22221100 00123456677788999999999876654433 1223344444444444444433
No 179
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=24.57 E-value=49 Score=26.55 Aligned_cols=28 Identities=21% Similarity=0.195 Sum_probs=25.2
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCCc
Q 004211 141 CVIGVPCYLTDVQRRAYLDAATIAGLKP 168 (768)
Q Consensus 141 ~VitVPa~~~~~qr~~l~~Aa~~AGl~~ 168 (768)
-.++.|+.++..+|..+-..|+..||.-
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4788899999999999999999998864
No 180
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=24.46 E-value=1.8e+02 Score=31.04 Aligned_cols=33 Identities=18% Similarity=0.322 Sum_probs=25.9
Q ss_pred CCcEEEEEEeCCceEEEEEEEeeCCeEEEEEEeC
Q 004211 193 GPTYVVFVDIGHCDTQVCVASYENGHMKILSHAF 226 (768)
Q Consensus 193 ~~~~vlv~D~GggT~dvsv~~~~~~~~~vl~~~~ 226 (768)
+...+|.+|+||.++-+.++++.++ +++....+
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~ 89 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITSEIY 89 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEEEEE
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEEEEe
Confidence 4567999999999999999999766 55544433
No 181
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=24.30 E-value=54 Score=33.10 Aligned_cols=46 Identities=11% Similarity=0.031 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004211 310 SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 310 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
.....+...++++|+++|+++++|+.|++.|+++++- +.+.+.||.
T Consensus 209 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~---d~~~~~lg~ 254 (313)
T 1zow_A 209 FAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIM---ESARERLGI 254 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHH---HHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHhCC
Confidence 3456777889999999999999999999999987643 446677773
No 182
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=24.25 E-value=1.2e+02 Score=34.14 Aligned_cols=47 Identities=19% Similarity=0.177 Sum_probs=0.0
Q ss_pred EEecHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCC
Q 004211 297 GFIRREEFEKLSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSR 344 (768)
Q Consensus 297 ~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr 344 (768)
+.||..++.++ +---..|..-++-.|+++|+..++|+.|+|.||++.
T Consensus 500 i~itq~DIr~~-qlAKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~ 546 (631)
T 3zyy_X 500 IVITEADIQNL-IRAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGK 546 (631)
T ss_dssp EEEEHHHHHHH-HHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCS
T ss_pred EEEeHHHHHHH-HHHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccc
No 183
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=24.11 E-value=46 Score=35.01 Aligned_cols=20 Identities=5% Similarity=0.248 Sum_probs=18.0
Q ss_pred eEEEEEcCccceEEEEEEcC
Q 004211 2 SVVGFDIGNENCVIAAVKQG 21 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g 21 (768)
.++|||+|.|++++++++.+
T Consensus 3 ~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred eEEEEECCccceeEEEEecc
Confidence 48999999999999998864
No 184
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=24.06 E-value=4e+02 Score=24.04 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=20.0
Q ss_pred CCCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhHHHHHHHHHHHH
Q 004211 553 GGMTKTELSEAVEKEHQLVQQDLKMERTKDRKNALESYVYEMRDKI 598 (768)
Q Consensus 553 ~~ls~~e~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l 598 (768)
.|++.+-...+.+....+ +.+.....++.|..|+-|+-++|..+
T Consensus 83 ~P~t~el~~~l~~~~e~L--r~~L~~d~EelR~~l~p~~~el~~~l 126 (165)
T 1gs9_A 83 TPVAEETRARLSKELQAA--QARLGADMEDVRGRLVQYRGEVQAML 126 (165)
T ss_dssp CCCCSHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred cchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555444444444444 22333344444555555544444444
No 185
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=23.72 E-value=86 Score=32.02 Aligned_cols=49 Identities=14% Similarity=0.053 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCCC
Q 004211 308 SSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNRE 359 (768)
Q Consensus 308 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~~ 359 (768)
++..++.+...++++|+++|++.++|+.+++..++.++ -+.+.+.+|.+
T Consensus 229 ~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~i---~~~~~~~lgl~ 277 (333)
T 4dfe_A 229 FKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIRI---MQSTCRKLGLP 277 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 34556677788999999999999999999999988654 46777778743
No 186
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=23.29 E-value=50 Score=33.77 Aligned_cols=46 Identities=13% Similarity=0.219 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004211 310 SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 310 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
-....+...++++|+++|+++++|+.|++.+++.++- +.+.+.||.
T Consensus 221 ~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~~---d~~~~~lg~ 266 (331)
T 2x3e_A 221 QAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRIL---AAVADQLDL 266 (331)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHH---HHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHcCC
Confidence 3456677889999999999999999999999987653 456777764
No 187
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=23.09 E-value=1e+02 Score=32.66 Aligned_cols=44 Identities=23% Similarity=0.304 Sum_probs=35.7
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHcCCCceeeccchHH-HHHHhhhc
Q 004211 138 ISNCVIGVPCYLTDVQRRAYLDAATIAGLKPLRLMHDCTA-TALGYGIY 185 (768)
Q Consensus 138 ~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~A-aal~y~~~ 185 (768)
+.++|++.|+.-+ -.++-||.++|.+.+.-+--.-| ||++||..
T Consensus 154 V~~Iv~~tPp~i~----p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTe 198 (434)
T 1kae_A 154 CKKVVLCSPPPIA----DEILYAAQLCGVQDVFNVGGAQAIAALAFGTE 198 (434)
T ss_dssp CSEEEEEECSSCC----HHHHHHHHHTTCCEEEECCHHHHHHHHHHCCS
T ss_pred CCeEEEECCCCCC----HHHHHHHHHcCCCEEeecccHHHHHHHHcCCC
Confidence 5789999998322 46889999999999999988877 56899864
No 188
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=22.86 E-value=51 Score=33.45 Aligned_cols=21 Identities=24% Similarity=0.393 Sum_probs=18.5
Q ss_pred eEEEEEcCccceEEEEEEcCC
Q 004211 2 SVVGFDIGNENCVIAAVKQGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (768)
.++|||+|.|++++++++..+
T Consensus 8 ~~lgiDiGgt~i~~~l~d~~G 28 (310)
T 3htv_A 8 VVAGVDMGATHIRFCLRTAEG 28 (310)
T ss_dssp EEEEEEECSSEEEEEEEETTS
T ss_pred EEEEEEeCCCEEEEEEECCCC
Confidence 589999999999999988654
No 189
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=22.86 E-value=53 Score=32.71 Aligned_cols=21 Identities=14% Similarity=0.230 Sum_probs=18.0
Q ss_pred eEEEEEcCccceEEEEEE-cCC
Q 004211 2 SVVGFDIGNENCVIAAVK-QGG 22 (768)
Q Consensus 2 ~viGID~GTt~s~va~~~-~g~ 22 (768)
..+.||+|+|+++.+++. ++.
T Consensus 24 M~L~IDiGNT~ik~g~~~~~~~ 45 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIEGAAR 45 (271)
T ss_dssp EEEEEEECSSCEEEEEEETTTE
T ss_pred cEEEEEeCCCeeEEEEEeCCCE
Confidence 478999999999999998 443
No 190
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=22.32 E-value=73 Score=33.63 Aligned_cols=46 Identities=7% Similarity=-0.070 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCC-ChHHHHHHHHhhc
Q 004211 307 LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLF 356 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~f 356 (768)
.++-+..++.+.|-......| .+|.|+++||-+ ..+.|++.+.+.+
T Consensus 301 A~d~f~yri~k~IGa~~a~Lg----gvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 301 ALEIFAYKVKKFIGEYSAVLN----GADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT----SCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhhC----CCCEEEECccccccCHHHHHHHHhhh
Confidence 334455666666666555443 689999999999 9999999998766
No 191
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=21.84 E-value=50 Score=34.46 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=17.8
Q ss_pred CeEEEEEcCccceEEEEEEc
Q 004211 1 MSVVGFDIGNENCVIAAVKQ 20 (768)
Q Consensus 1 m~viGID~GTt~s~va~~~~ 20 (768)
|.++|||+|.|++++++++.
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEE
T ss_pred CeEEEEEEccccEEEEEEec
Confidence 46899999999999999875
No 192
>3nr7_A DNA-binding protein H-NS; dimer, oligomerisation, DNA condensation; 3.70A {Salmonella enterica subsp} PDB: 1lr1_A 1ni8_A
Probab=21.58 E-value=3.1e+02 Score=21.85 Aligned_cols=57 Identities=19% Similarity=0.227 Sum_probs=41.1
Q ss_pred cHHHHHHHHHHHHHhHhHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHH
Q 004211 633 SENVYAERLEDLKKLVDPIEGRYKDEEARAQATGALLKCAMDYRKVVEAHSLPSKVRDAV 692 (768)
Q Consensus 633 ~~~~~~~kl~~L~~~~~pi~~R~~e~~~rp~a~~~l~~~l~~~~~~~~~~~~~~~e~~~v 692 (768)
+.+.+.+-+..|..+ |..|..+....-.+.+.-+..++.++..+....|+.+|+...
T Consensus 25 ~le~Lee~leKl~~V---veERree~~~~~~~~~er~~Kl~~~~e~l~~~GI~~eeL~~~ 81 (86)
T 3nr7_A 25 TLETLEEMLEKLEVV---VNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNS 81 (86)
T ss_dssp CHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHhh
Confidence 444444444444443 668888888888888888889999999887777999887643
No 193
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=21.51 E-value=89 Score=31.44 Aligned_cols=44 Identities=14% Similarity=0.214 Sum_probs=32.3
Q ss_pred CEEEEecCCCChHHHHHHHHhhcCCCCCCcCCchhHHHhhHHHHhh
Q 004211 334 HSVELVGSGSRIPAISRMLNSLFNREPGRTINASECVARGCALQCA 379 (768)
Q Consensus 334 ~~V~LvGG~srip~v~~~l~~~fg~~v~~~~n~~eava~GAa~~a~ 379 (768)
..|.|+|........+..|+. +|.++ ...++++++..|....+.
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~G~~~-~~~d~~~~~~~GL~~~~~ 291 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-IGREV-SAVAGDTAFQTGIRSIAY 291 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-TTCCE-EEEEHHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-cCCCc-eecCHHHHHHHHHHHHHH
Confidence 459999999888888888864 67643 344889998888765443
No 194
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=21.37 E-value=76 Score=32.33 Aligned_cols=46 Identities=17% Similarity=0.154 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCCChHHHHHHHHhhcCC
Q 004211 310 SLLERMRIPCQKALAGSGLNVEKIHSVELVGSGSRIPAISRMLNSLFNR 358 (768)
Q Consensus 310 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~fg~ 358 (768)
.....+...++++|+++|+++++|+.+++.++++++- +.+.+.||.
T Consensus 229 ~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~~---~~~~~~lg~ 274 (335)
T 1u6e_A 229 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRIN---ELLVKNLQL 274 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHH---HHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHH---HHHHHHcCC
Confidence 3456777889999999999999999999999887653 345666763
No 195
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=21.37 E-value=6e+02 Score=25.07 Aligned_cols=27 Identities=7% Similarity=0.155 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 004211 688 VRDAVIDECSKAEEWLREKVTQQDSLP 714 (768)
Q Consensus 688 e~~~v~~~~~~~~~Wl~~~~~~q~~~~ 714 (768)
.+..+...+++...||.+....-...+
T Consensus 220 ~~~~F~~~~~~l~~Wl~~~~~~l~~~~ 246 (323)
T 3edv_A 220 DKFRFFSMVRDLMLWMEDVIRQIEAQE 246 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 355678889999999999887666533
No 196
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=21.12 E-value=52 Score=36.22 Aligned_cols=33 Identities=9% Similarity=0.079 Sum_probs=26.6
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHcCCCceee
Q 004211 139 SNCVIGVPCYLTDVQRRAYLDAATIAGLKPLRL 171 (768)
Q Consensus 139 ~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~~~l 171 (768)
..++.-+|..++...-..+.+++...|+++...
T Consensus 131 ~~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~~ 163 (607)
T 1nbw_A 131 EGWIVLIDDAVDFLDAVWWLNEALDRGINVVAA 163 (607)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCccCHHHHHHHHHHHHHcCCcEEEE
Confidence 345555999999999999999999999875443
No 197
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=21.10 E-value=12 Score=37.79 Aligned_cols=44 Identities=11% Similarity=-0.016 Sum_probs=25.0
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHH-HcCC-CceeeccchHHHHHHh
Q 004211 138 ISNCVIGVPCYLTDVQRRAYLDAAT-IAGL-KPLRLMHDCTATALGY 182 (768)
Q Consensus 138 ~~~~VitVPa~~~~~qr~~l~~Aa~-~AGl-~~~~li~Ep~Aaal~y 182 (768)
+..+.|++|..- ......+++..+ ..++ ..+.+.|+..||+++-
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge 103 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGL 103 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHT
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhh
Confidence 345778888753 211123433333 3465 3679999999999854
No 198
>2kmf_A Photosystem II 11 kDa protein; PSB27, structure, helical bundle, cyanobacteria, photosynthesis; NMR {Synechocystis SP} PDB: 2knd_A
Probab=20.64 E-value=3.9e+02 Score=22.59 Aligned_cols=90 Identities=12% Similarity=0.149 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHhHhHHHHhhHhHH--HHHHHHHHHHHHHHHHHHHHH---hCCCCh
Q 004211 612 EGISRNLRDTEEWLYEDGDDESENVYAERLEDLKKLVDPIEGRYKDEE--ARAQATGALLKCAMDYRKVVE---AHSLPS 686 (768)
Q Consensus 612 ~~l~~~l~~~~~WL~~~g~~a~~~~~~~kl~~L~~~~~pi~~R~~e~~--~rp~a~~~l~~~l~~~~~~~~---~~~~~~ 686 (768)
+.-...++.+.+-|..+.++... .+-.+++++.+.-+..||.-.. ..-.....|+++|+.+..... ..-+++
T Consensus 18 ~dT~~Vv~~lr~~l~l~~d~~~~---~~a~~~ar~~ind~vsrYRr~~~v~g~~Sf~tm~tAlNaLAGHY~s~g~~PlPe 94 (115)
T 2kmf_A 18 QDTLTVIATLREAIDLPQDAPNR---QEVQDTARGQINDYISRYRRKGDAGGLKSFTTMQTALNSLAGYYTSYGARPIPE 94 (115)
T ss_dssp HHHHHHHHHHHHHHHSCTTCTTH---HHHHHHHHHHHHHHHHHTHHHHCSSSCHHHHHHHHHHHHHHHHHHHHSSCCCCH
T ss_pred HHHHHHHHHHHHHHcCCCCCccH---HHHHHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHHHHHHHhhcCCCCCCH
Confidence 44445555666666655445543 4556677777888888887542 344566677777775544441 122999
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 004211 687 KVRDAVIDECSKAEEWLR 704 (768)
Q Consensus 687 ~e~~~v~~~~~~~~~Wl~ 704 (768)
+-++.|...++.++.-|.
T Consensus 95 k~k~Rl~~el~~AE~al~ 112 (115)
T 2kmf_A 95 KLKKRLQLEFTQAERSIE 112 (115)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999887764
No 199
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=20.60 E-value=1e+02 Score=31.56 Aligned_cols=45 Identities=13% Similarity=0.154 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEecCCC--ChHHHHHHHHhhcCCC
Q 004211 315 MRIPCQKALAGSGLNVEKIHSVELVGSGS--RIPAISRMLNSLFNRE 359 (768)
Q Consensus 315 i~~~i~~~l~~~~~~~~~i~~V~LvGG~s--rip~v~~~l~~~fg~~ 359 (768)
.....+++|+++|+++++|+.|+++.-+. .+|..--.|.+.+|.+
T Consensus 66 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~ 112 (350)
T 4ewp_A 66 AVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT 112 (350)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC
Confidence 34567889999999999999998876554 5788999999999843
No 200
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=20.55 E-value=2.6e+02 Score=29.32 Aligned_cols=47 Identities=2% Similarity=0.058 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEecCCC-ChHHHHHHHHhhcC
Q 004211 307 LSSSLLERMRIPCQKALAGSGLNVEKIHSVELVGSGS-RIPAISRMLNSLFN 357 (768)
Q Consensus 307 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~fg 357 (768)
.++-+..++.+.|-......+ .+|.|+++||-+ ..+.|++.+.+.++
T Consensus 305 A~d~f~yri~k~IGa~aa~L~----GvDaIVFTgGIGEns~~vR~~i~~~l~ 352 (404)
T 4h0o_A 305 AFDVYIKQLAKTIGGLMVEIG----GLDLLVFTDQMGLEVWQVRKAICDKMK 352 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT----CCSEEEEEHHHHHHCHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHHHHhc----CCCEEEECCccccCcHHHHHHHHhhhh
Confidence 344455666666655544332 389999999975 66999999887663
Done!