BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004212
(768 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449456160|ref|XP_004145818.1| PREDICTED: DNA ligase 1-like [Cucumis sativus]
Length = 801
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/758 (69%), Positives = 610/758 (80%), Gaps = 36/758 (4%)
Query: 2 LLTLRSCYPLRLTPLSGNVVKPTSFSRLSFSSHHLFQKPKPLSSS-LNPRRKMSSSAPNA 60
+L+LRSC+ LR P++ + F +L FS++ F KP+S + ++P SS P+A
Sbjct: 1 MLSLRSCFYLR--PIT---LPHPQFKKLIFSNNSSFSF-KPISHNFVSPM----SSRPSA 50
Query: 61 FQVLMSAAAKKKPSPQPNSSSSSSSPKKRRTLDT-QTPKTTNSVVGEKIQEVAEEPSNDL 119
F LMS A NSS PKKR+ LD+ +P +S + + E
Sbjct: 51 FDALMSGARAAAKKKPANSS-----PKKRKALDSLDSPLKPSSFLALESTPPVESQCGSS 105
Query: 120 VKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAK--------------EKIAELKS 165
V + + +D + K R+ N V AK E+ A+LKS
Sbjct: 106 VSNLDDHGGTHLDGVDLGET-----KLRQDNDGGVGAKIGPFGNKTCASSVQERTAKLKS 160
Query: 166 NIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVME 225
+ LKKKA +F+ K VACW++GERVPF+FL L FDMIS E+ RI ITDIVCNMLRTVM+
Sbjct: 161 STAELKKKAKDFNSKNVACWKEGERVPFLFLCLGFDMISEESSRITITDIVCNMLRTVMD 220
Query: 226 TTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGL 285
TTP+DLV VYL ANKIAPAHEGLELGIGDASIIKAL+EA GRTE+ VKKQY+E+GDLGL
Sbjct: 221 TTPDDLVATVYLLANKIAPAHEGLELGIGDASIIKALSEAFGRTEAQVKKQYKELGDLGL 280
Query: 286 VAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQY 345
VAKASRSSQSMMRKPD LT+TKVFDTFRLIAKE+GKDSQEKKKN IK+LLVAATDCEP Y
Sbjct: 281 VAKASRSSQSMMRKPDALTVTKVFDTFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPLY 340
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVY 405
LIRLLQ+KLRIGLAEQTLLAALGQAAVY+E+HS PPPNIQSPLEEA+KIVKQV+S+LPVY
Sbjct: 341 LIRLLQTKLRIGLAEQTLLAALGQAAVYSEKHSTPPPNIQSPLEEASKIVKQVYSILPVY 400
Query: 406 EKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGER 465
+K+VPALL+ GVWNLS TC+FTPGIPIGPMLAKPTKGVSEI+NKFQ +EFTCEYKYDGER
Sbjct: 401 DKLVPALLSGGVWNLSKTCNFTPGIPIGPMLAKPTKGVSEILNKFQGLEFTCEYKYDGER 460
Query: 466 AQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKIL 525
AQIHY+EDGSVEIYSRNAERNTGKFPDVVL VSR+KKPSVRSF+LDCE+VAYDR KQKIL
Sbjct: 461 AQIHYMEDGSVEIYSRNAERNTGKFPDVVLTVSRIKKPSVRSFILDCELVAYDRGKQKIL 520
Query: 526 PFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFF 585
PFQ LSTRARKNV++SDIKV+VC++AFD+LY +GQPL+Q +L VRRE LY+SF EE G+F
Sbjct: 521 PFQILSTRARKNVAVSDIKVEVCVFAFDLLYLDGQPLIQRELNVRRELLYNSFIEESGYF 580
Query: 586 QFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESI 645
QFAT + + DL+EIQKFLDA+VD SCEGLIIKT++RDATYEPSKRS NWLKLKKDYI+SI
Sbjct: 581 QFATAIITNDLEEIQKFLDASVDQSCEGLIIKTLNRDATYEPSKRSHNWLKLKKDYIDSI 640
Query: 646 GDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR 705
GDSLDLVPIAAFHGRGKRTGVYGAFLLACYD++NEEFQSICKIGTGFSEAMLEERS+SLR
Sbjct: 641 GDSLDLVPIAAFHGRGKRTGVYGAFLLACYDNDNEEFQSICKIGTGFSEAMLEERSASLR 700
Query: 706 SKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
SKVIP+P+ YYR+ DTI+PDVWFEPTE E + +I
Sbjct: 701 SKVIPEPKSYYRYGDTINPDVWFEPTEVWEVKAADLTI 738
>gi|224106842|ref|XP_002314303.1| predicted protein [Populus trichocarpa]
gi|222850711|gb|EEE88258.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 1030 bits (2664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/611 (80%), Positives = 551/611 (90%), Gaps = 4/611 (0%)
Query: 133 SEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVP 192
++ + Q P SPKKRK ++ + + S+IVLLKKKAG+F P+MVA WEKGERVP
Sbjct: 14 TQPQPQLKPSSPKKRK----TLDHPQNPDKTLSSIVLLKKKAGDFKPEMVANWEKGERVP 69
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
FIF+SL FD+I+NETGRI+ITDIVCNMLRTVM+TTPEDLV VVYL ANK+APAHEG+ELG
Sbjct: 70 FIFVSLAFDLIANETGRIVITDIVCNMLRTVMDTTPEDLVAVVYLLANKVAPAHEGVELG 129
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTF 312
IG+A IIKALAEACGR E VKKQY+++GDLGLVAKASRSSQSMMRKPDPLTITKVF+TF
Sbjct: 130 IGEALIIKALAEACGRKEKEVKKQYKDLGDLGLVAKASRSSQSMMRKPDPLTITKVFNTF 189
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
+ IAKE+GKDSQ+KKKN IKALLVAATDCEP YLIRLLQ+KLRIGLAEQTLLAALGQAAV
Sbjct: 190 QQIAKESGKDSQDKKKNHIKALLVAATDCEPLYLIRLLQTKLRIGLAEQTLLAALGQAAV 249
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
Y E+HS PPP+IQSPLEEAAKIVKQV+SVLPVY+KIVPALL+DGVWNL TCSFTPG+P+
Sbjct: 250 YTEEHSTPPPHIQSPLEEAAKIVKQVYSVLPVYDKIVPALLSDGVWNLPKTCSFTPGVPV 309
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
GPMLAKPTKGVSEIV KFQDMEF+CEYKYDGERAQIHYLE+GSVEIYSRN+ERNTGKFPD
Sbjct: 310 GPMLAKPTKGVSEIVTKFQDMEFSCEYKYDGERAQIHYLENGSVEIYSRNSERNTGKFPD 369
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAF 552
VV +SRLK+PS SF+LDCE+VAYDREK+KILPFQ LSTRARKNV +SDIKV+VCIYAF
Sbjct: 370 VVAVISRLKRPSASSFILDCELVAYDREKKKILPFQILSTRARKNVVMSDIKVNVCIYAF 429
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCE 612
D+LY N QPL+Q++L+VRREHLY SFEEEPGFFQFAT +TS DL+EIQKFLD AVDASCE
Sbjct: 430 DMLYLNDQPLIQKELKVRREHLYSSFEEEPGFFQFATAITSNDLEEIQKFLDTAVDASCE 489
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
GLIIKTM++DATYEPS+RS NWLKLKKDY+ESIGDSLDLVPI AFHGRGKRTGVYGAFLL
Sbjct: 490 GLIIKTMNKDATYEPSRRSHNWLKLKKDYMESIGDSLDLVPIGAFHGRGKRTGVYGAFLL 549
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
ACY+SNNEEFQSICKIGTGFSE +LEERS+SLRS+VIPKP+ YYRF DTI PDVWFEP E
Sbjct: 550 ACYNSNNEEFQSICKIGTGFSEQVLEERSASLRSQVIPKPKSYYRFGDTIKPDVWFEPKE 609
Query: 733 RPETSNSPASI 743
E + +I
Sbjct: 610 VWEVKAADLTI 620
>gi|449496284|ref|XP_004160093.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Cucumis sativus]
Length = 801
Score = 1029 bits (2661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/759 (69%), Positives = 610/759 (80%), Gaps = 38/759 (5%)
Query: 2 LLTLRSCYPLRLTPLSGNVVKPTSFSRLSFSSHHLFQKPKPLSSS-LNPRRKMSSSAPNA 60
+L+LRSC+ LR P++ + F +L FS++ F KP+S + ++P SS P+A
Sbjct: 1 MLSLRSCFYLR--PIT---LPHPQFKKLIFSNNSSFSF-KPISHNFVSPM----SSRPSA 50
Query: 61 FQVLMSAAAKKKPSPQPNSSSSSSSPKKRRTLDTQTP--KTTNSVVGEKIQEVAEEPSND 118
F LMS A NSS PKKR+ LD+ P K ++ + E V E
Sbjct: 51 FDALMSGARAAAKKKPANSS-----PKKRKALDSLDPPLKPSSFLALESTPPV-ESQCGS 104
Query: 119 LVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAK--------------EKIAELK 164
V + + +D + K R+ N V AK E+ A+LK
Sbjct: 105 SVSNLDDHGGTHLDGVDLGET-----KLRQDNDGGVGAKIGPFGNKTCASSVQERTAKLK 159
Query: 165 SNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVM 224
S+ LKKKA +F+ K VACW++GERVPF FL L FDMIS E+ RI ITDIVCNMLRTVM
Sbjct: 160 SSTAELKKKAKDFNSKNVACWKEGERVPFXFLCLGFDMISEESSRITITDIVCNMLRTVM 219
Query: 225 ETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLG 284
+TTP+DLV VYL ANKIAPAHEGLELGIGDASIIKAL+EA GRTE+ VKKQY+E+GDLG
Sbjct: 220 DTTPDDLVATVYLLANKIAPAHEGLELGIGDASIIKALSEAFGRTEAQVKKQYKELGDLG 279
Query: 285 LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQ 344
LVAKASRSSQSMMRKPD LT+TKVFDTFRLIAKE+GKDSQEKKKN IK+LLVAATDCEP
Sbjct: 280 LVAKASRSSQSMMRKPDALTVTKVFDTFRLIAKESGKDSQEKKKNHIKSLLVAATDCEPL 339
Query: 345 YLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
YLIRLLQ+KLRIGLAEQTLLAALGQAAVY+E+HS PPPNIQSPLEEA+KIVKQV+S+LPV
Sbjct: 340 YLIRLLQTKLRIGLAEQTLLAALGQAAVYSEKHSTPPPNIQSPLEEASKIVKQVYSILPV 399
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y+K+VPALL+ GVWNLS TC+FTPGIPIGPMLAKPTKGVSEI+NKFQ +EFTCEYKYDGE
Sbjct: 400 YDKLVPALLSGGVWNLSKTCNFTPGIPIGPMLAKPTKGVSEILNKFQGLEFTCEYKYDGE 459
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIHY+EDGSVEIYSRNAERNTGKFPDVVL VSR+KKPSVRSF+LDCE+VAYDR KQKI
Sbjct: 460 RAQIHYMEDGSVEIYSRNAERNTGKFPDVVLTVSRIKKPSVRSFILDCELVAYDRGKQKI 519
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
LPFQ LSTRARKNV++SDIKV+VC++AFD+LY +GQPL+Q +L VRRE LY+SF EE G+
Sbjct: 520 LPFQILSTRARKNVAVSDIKVEVCVFAFDLLYLDGQPLIQRELNVRRELLYNSFIEESGY 579
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
FQFAT + + DL+EIQKFLDA+VD SCEGLIIKT++RDATYEPSKRS NWLKLKKDYI+S
Sbjct: 580 FQFATAIITNDLEEIQKFLDASVDQSCEGLIIKTLNRDATYEPSKRSHNWLKLKKDYIDS 639
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYD++NEEFQSICKIGTGFSEAMLEERS+SL
Sbjct: 640 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDNDNEEFQSICKIGTGFSEAMLEERSASL 699
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
RSKVIP+P+ YYR+ DTI+PDVWFEPTE E + +I
Sbjct: 700 RSKVIPEPKSYYRYGDTINPDVWFEPTEVWEVKAADLTI 738
>gi|297849114|ref|XP_002892438.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata]
gi|297338280|gb|EFH68697.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata]
Length = 793
Score = 1016 bits (2626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/749 (67%), Positives = 602/749 (80%), Gaps = 26/749 (3%)
Query: 2 LLTLRSCYPLRLTPLSGNVVKPTSFSR--LSFSSH--HLFQKPKPLSSSLNPRRKMSSSA 57
+L +RS LR P + + FS LSFS HL LSS R MSSS
Sbjct: 1 MLAIRSSNYLRCLPSLCTKTQISQFSSVLLSFSRQVSHL-----RLSSC---HRAMSSSR 52
Query: 58 PNAFQVLMS---AAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEE 114
P+AF LMS AAAKKK P +++SS SP KR+ +TQ ++V E E+
Sbjct: 53 PSAFDALMSNARAAAKKK---TPQTTTSSRSPNKRKIGETQDANLGKTLVSEGTLPKTED 109
Query: 115 PSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKA 174
P V+PIS+ D+ ++ + KK + ++S +KI E+KS I LLKKK
Sbjct: 110 P----VEPISDSAKPRSDTSSIAEDSKTGTKKAR----TLSKTDKIDEMKSKIGLLKKKP 161
Query: 175 GEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
+FDP+ V+CWEKGERVPF+FL+L FD+ISNE+GRI+ITDI+CNMLRTV+ TTPEDLV
Sbjct: 162 NDFDPEKVSCWEKGERVPFLFLALAFDLISNESGRIVITDILCNMLRTVIATTPEDLVAT 221
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
VYLAAN+IAPAHEG+ELGIG+ +IIKA++EA GRTE HVKKQ E+GDLGLVAK SRS+Q
Sbjct: 222 VYLAANEIAPAHEGVELGIGEGTIIKAISEAFGRTEDHVKKQNTELGDLGLVAKGSRSTQ 281
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
+MM KP+PLT+ KVFDTFR IAKE+GKDS EKKKNR+KALLVA TDCEP YL RLLQ+KL
Sbjct: 282 TMMFKPEPLTVVKVFDTFRQIAKESGKDSNEKKKNRMKALLVATTDCEPLYLTRLLQAKL 341
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
R+G + QT+LAALGQAAVYNE+HSKPPPN +SPLEEAAKIVKQVF+VLPVY+ IVPALLT
Sbjct: 342 RLGFSGQTVLAALGQAAVYNEEHSKPPPNTKSPLEEAAKIVKQVFTVLPVYDIIVPALLT 401
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
GVWNL TC+FT G+PIGPMLAKPTKGV+EI+NKFQD+ FTCEYKYDGERAQIH+LEDG
Sbjct: 402 GGVWNLPKTCNFTLGVPIGPMLAKPTKGVAEILNKFQDIVFTCEYKYDGERAQIHFLEDG 461
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
+ EIYSRNAERNTGK+PDV LA+SRLKKPSV+SF+LDCE+VA+DREK+KILPFQ LSTRA
Sbjct: 462 TFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRA 521
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI 594
RKNV+++DIKV VCI+AFD+LY NGQ L+QE L +RRE LY+SFEE+PG+FQFAT LTS
Sbjct: 522 RKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLNIRREKLYESFEEDPGYFQFATALTSS 581
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPI 654
D+DEIQKFLDA+VD CEGLIIKT++ DATYEP+KRS NWLKLKKDY++SIGDS+DLVPI
Sbjct: 582 DIDEIQKFLDASVDVGCEGLIIKTLNSDATYEPAKRSNNWLKLKKDYMDSIGDSMDLVPI 641
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRP 714
AAFHGRGKRTGVYGAFLLACYD + EEFQSICKIGTGFS+AML+ERSSSLRS+VI P+
Sbjct: 642 AAFHGRGKRTGVYGAFLLACYDVDKEEFQSICKIGTGFSDAMLDERSSSLRSQVIATPKQ 701
Query: 715 YYRFADTISPDVWFEPTERPETSNSPASI 743
YYR D+++PDVWFEPTE E + +I
Sbjct: 702 YYRVGDSLNPDVWFEPTEVWEVKAADLTI 730
>gi|30680522|ref|NP_172293.2| DNA ligase 1 [Arabidopsis thaliana]
gi|27735188|sp|Q42572.2|DNLI1_ARATH RecName: Full=DNA ligase 1; Short=AtLIG1; AltName: Full=DNA ligase
I; AltName: Full=Polydeoxyribonucleotide synthase [ATP]
1; Flags: Precursor
gi|26449576|dbj|BAC41914.1| putative DNA ligase [Arabidopsis thaliana]
gi|29029040|gb|AAO64899.1| At1g08130 [Arabidopsis thaliana]
gi|332190130|gb|AEE28251.1| DNA ligase 1 [Arabidopsis thaliana]
Length = 790
Score = 1002 bits (2590), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/749 (66%), Positives = 599/749 (79%), Gaps = 29/749 (3%)
Query: 2 LLTLRSCYPLRLTPLSGNVVKPTSFSR--LSFSSH--HLFQKPKPLSSSLNPRRKMSSSA 57
+L +RS LR P + + FS +SFS HL LSS R MSSS
Sbjct: 1 MLAIRSSNYLRCIPSLCTKTQISQFSSVLISFSRQISHL-----RLSSC---HRAMSSSR 52
Query: 58 PNAFQVLMS---AAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEE 114
P+AF LMS AAAKKK P +++ S SP KR+ +TQ ++V E E
Sbjct: 53 PSAFDALMSNARAAAKKK---TPQTTNLSRSPNKRKIGETQDANLGKTIVSEGTLPKTE- 108
Query: 115 PSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKA 174
DL++P+S+ + D+ ++ + KK K K E+KS I LLKKK
Sbjct: 109 ---DLLEPVSDSANPRSDTSSIAEDSKTGAKKAKT-------LSKTDEMKSKIGLLKKKP 158
Query: 175 GEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
+FDP+ ++CWEKGERVPF+F++L FD+ISNE+GRI+ITDI+CNMLRTV+ TTPEDLV
Sbjct: 159 NDFDPEKMSCWEKGERVPFLFVALAFDLISNESGRIVITDILCNMLRTVIATTPEDLVAT 218
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
VYL+AN+IAPAHEG+ELGIG+++IIKA++EA GRTE HVKKQ E+GDLGLVAK SRS+Q
Sbjct: 219 VYLSANEIAPAHEGVELGIGESTIIKAISEAFGRTEDHVKKQNTELGDLGLVAKGSRSTQ 278
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
+MM KP+PLT+ KVFDTFR IAKE+GKDS EKKKNR+KALLVA TDCEP YL RLLQ+KL
Sbjct: 279 TMMFKPEPLTVVKVFDTFRQIAKESGKDSNEKKKNRMKALLVATTDCEPLYLTRLLQAKL 338
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
R+G + QT+LAALGQAAVYNE+HSKPPPN +SPLEEAAKIVKQVF+VLPVY+ IVPALL+
Sbjct: 339 RLGFSGQTVLAALGQAAVYNEEHSKPPPNTKSPLEEAAKIVKQVFTVLPVYDIIVPALLS 398
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
GVWNL TC+FT G+PIGPMLAKPTKGV+EI+NKFQD+ FTCEYKYDGERAQIH++EDG
Sbjct: 399 GGVWNLPKTCNFTLGVPIGPMLAKPTKGVAEILNKFQDIVFTCEYKYDGERAQIHFMEDG 458
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
+ EIYSRNAERNTGK+PDV LA+SRLKKPSV+SF+LDCE+VA+DREK+KILPFQ LSTRA
Sbjct: 459 TFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRA 518
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI 594
RKNV+++DIKV VCI+AFD+LY NGQ L+QE L++RRE LY+SFEE+PG+FQFAT +TS
Sbjct: 519 RKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLKIRREKLYESFEEDPGYFQFATAVTSN 578
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPI 654
D+DEIQKFLDA+VD CEGLIIKT+D DATYEP+KRS NWLKLKKDY++SIGDS+DLVPI
Sbjct: 579 DIDEIQKFLDASVDVGCEGLIIKTLDSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPI 638
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRP 714
AAFHGRGKRTGVYGAFLLACYD + EEFQSICKIGTGFS+AML+ERSSSLRS+VI P+
Sbjct: 639 AAFHGRGKRTGVYGAFLLACYDVDKEEFQSICKIGTGFSDAMLDERSSSLRSQVIATPKQ 698
Query: 715 YYRFADTISPDVWFEPTERPETSNSPASI 743
YYR D+++PDVWFEPTE E + +I
Sbjct: 699 YYRVGDSLNPDVWFEPTEVWEVKAADLTI 727
>gi|1359495|emb|CAA66599.1| DNA ligase [Arabidopsis thaliana]
Length = 790
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/749 (66%), Positives = 598/749 (79%), Gaps = 29/749 (3%)
Query: 2 LLTLRSCYPLRLTPLSGNVVKPTSFSR--LSFSSH--HLFQKPKPLSSSLNPRRKMSSSA 57
+L +RS LR P + + FS +SFS HL LSS R MSSS
Sbjct: 1 MLAIRSSNYLRCIPSLCTKTQISQFSSVLISFSRQISHL-----RLSSC---HRAMSSSR 52
Query: 58 PNAFQVLMS---AAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEE 114
P+AF LMS AAAKKK P +++ S SP KR+ +TQ ++V E E
Sbjct: 53 PSAFDALMSNARAAAKKK---TPQTTNLSRSPNKRKIGETQDANLGKTIVSEGTLPKTE- 108
Query: 115 PSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKA 174
DL++P+S+ + D+ ++ + KK K K E+KS I LLKKK
Sbjct: 109 ---DLLEPVSDSANPRSDTSSIAEDSKTGAKKAKT-------LSKTDEMKSKIGLLKKKP 158
Query: 175 GEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
+FDP+ ++CWEKGERVPF+F++L FD+ISNE+GRI+ITDI+CNMLRTV+ TTPEDLV
Sbjct: 159 NDFDPEKMSCWEKGERVPFLFVALAFDLISNESGRIVITDILCNMLRTVIATTPEDLVAT 218
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
VYL+AN+IAPAHEG+ELGIG+++IIKA++EA GRTE HVKKQ E+GDLGLVAK SRS+Q
Sbjct: 219 VYLSANEIAPAHEGVELGIGESTIIKAISEAFGRTEDHVKKQNTELGDLGLVAKGSRSTQ 278
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
+MM KP+PLT+ KVFDTFR IAKE+GKDS EKKKNR+KALLVA TDCEP YL RLLQ+KL
Sbjct: 279 TMMFKPEPLTVVKVFDTFRQIAKESGKDSNEKKKNRMKALLVATTDCEPLYLTRLLQAKL 338
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
R+G + QT+LAALGQAAVYNE+HSKPPPN +SPLEEAAKIVKQVF+VLPVY+ IVPALL+
Sbjct: 339 RLGFSGQTVLAALGQAAVYNEEHSKPPPNTKSPLEEAAKIVKQVFTVLPVYDIIVPALLS 398
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
GVWNL TC+FT G+PIGPMLAKPTKGV+EI+NKFQD+ FTCEYKYDGERAQIH++EDG
Sbjct: 399 GGVWNLPKTCNFTLGVPIGPMLAKPTKGVAEILNKFQDIVFTCEYKYDGERAQIHFMEDG 458
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
+ EIYSRNAERNTGK+PDV LA+SRLKKPSV+SF+LDCE+VA+DREK+KILPFQ LSTRA
Sbjct: 459 TFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRA 518
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI 594
RKNV+++DIKV VCI+AFD+LY NGQ L+QE L++RRE LY+SFEE+PG+FQFAT +TS
Sbjct: 519 RKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLKIRREKLYESFEEDPGYFQFATAVTSN 578
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPI 654
D+DEIQKFLDA+VD CEGLIIKT+D DATYEP+KRS NWLKLKKDY++SIGDS+DLVPI
Sbjct: 579 DIDEIQKFLDASVDVGCEGLIIKTLDSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPI 638
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRP 714
AFHGRGKRTGVYGAFLLACYD + EEFQSICKIGTGFS+AML+ERSSSLRS+VI P+
Sbjct: 639 PAFHGRGKRTGVYGAFLLACYDVDKEEFQSICKIGTGFSDAMLDERSSSLRSQVIATPKQ 698
Query: 715 YYRFADTISPDVWFEPTERPETSNSPASI 743
YYR D+++PDVWFEPTE E + +I
Sbjct: 699 YYRVGDSLNPDVWFEPTEVWEVKAADLTI 727
>gi|225436462|ref|XP_002272683.1| PREDICTED: DNA ligase 1 [Vitis vinifera]
gi|297734904|emb|CBI17138.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/693 (72%), Positives = 564/693 (81%), Gaps = 38/693 (5%)
Query: 55 SSAPNAFQVLMSAAAKKK---PSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEV 111
SS P+AF LMS A P Q S S SSSPKKR+T TQTP
Sbjct: 2 SSLPSAFDALMSKARAAAKKKPQSQSESQSQSSSPKKRKT-QTQTP-------------- 46
Query: 112 AEEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLK 171
DL P + DS+ E P+ K +KV+V I L+
Sbjct: 47 ------DLAPPKKSTNSQTPDSKIEPLDALPAKKPKKVDVEEC------------IGQLR 88
Query: 172 KKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDL 231
KKA +F+PK A WE + VPF+FL FDMIS ETGRI+ITDIVCNMLRTVM TP+DL
Sbjct: 89 KKAADFNPKTAAYWED-KPVPFLFLVRAFDMISKETGRIVITDIVCNMLRTVMHATPDDL 147
Query: 232 VPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASR 291
V VVYL+AN+IAPAHEGLELGIGDASIIKALAEACGR E +K QY+ +GDLGLVAKA R
Sbjct: 148 VAVVYLSANRIAPAHEGLELGIGDASIIKALAEACGRKEEQIKSQYKALGDLGLVAKACR 207
Query: 292 SSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQ 351
SSQS+MRKPDPLT+ KVF+TF LIAKE+GKDSQEKKKN IK LLVAATDCEPQYLIRLLQ
Sbjct: 208 SSQSLMRKPDPLTVAKVFNTFGLIAKESGKDSQEKKKNHIKTLLVAATDCEPQYLIRLLQ 267
Query: 352 SKLRIGLAEQTLLAALGQAAVYNEQH-SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVP 410
+KLRIGLAEQTLL ALGQAAVYN++ ++PPP+IQSPLEEAA IVKQ +SVLPVY+KIVP
Sbjct: 268 TKLRIGLAEQTLLTALGQAAVYNDKELTQPPPHIQSPLEEAANIVKQSYSVLPVYDKIVP 327
Query: 411 ALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY 470
ALL+ GVWNL TCSF PG+P+GPMLAKPTKGVSEI++KFQDMEFTCEYKYDGERAQIHY
Sbjct: 328 ALLSGGVWNLPKTCSFMPGVPVGPMLAKPTKGVSEIIDKFQDMEFTCEYKYDGERAQIHY 387
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
EDGSVEIYSRNAERNTGK+PDVV+AVSRLKK SV SFVLDCE+VAYDR+K KILPFQ L
Sbjct: 388 KEDGSVEIYSRNAERNTGKYPDVVVAVSRLKKSSVSSFVLDCELVAYDRQKGKILPFQVL 447
Query: 531 STRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
STRARKNV +S+IKVDVCI+AFDILYRNGQPLLQEQL++RREHLY+SFEEEPGFFQFAT
Sbjct: 448 STRARKNVVMSEIKVDVCIFAFDILYRNGQPLLQEQLKIRREHLYESFEEEPGFFQFATA 507
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLD 650
+TS DL+EIQKFL+AAVD SCEGLIIKT++ DATYEPSKRS NWLKLKKDY+E+IGDSLD
Sbjct: 508 ITSNDLEEIQKFLEAAVDTSCEGLIIKTLNGDATYEPSKRSHNWLKLKKDYMENIGDSLD 567
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP 710
LVPIAAFHGRGKR GVYGAFLLACYDSN EE+QSICKIGTGFSEA+LEERS+SLRSKVI
Sbjct: 568 LVPIAAFHGRGKRAGVYGAFLLACYDSNKEEYQSICKIGTGFSEAVLEERSASLRSKVIS 627
Query: 711 KPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+P+PYYR+AD+I PDVWFEPTE E + +I
Sbjct: 628 RPKPYYRYADSIDPDVWFEPTEVWEVKAADLTI 660
>gi|356541453|ref|XP_003539190.1| PREDICTED: DNA ligase 1-like [Glycine max]
Length = 701
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/683 (71%), Positives = 556/683 (81%), Gaps = 37/683 (5%)
Query: 55 SSAPNAFQVLMS---AAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEV 111
S P+AF LMS AAAKKK QP SPKKR+T +Q P ++ QE
Sbjct: 2 SKPPSAFDALMSGARAAAKKKSQSQP-------SPKKRKTPPSQNPSNLKTLTP---QEP 51
Query: 112 AEEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLK 171
A +P VKP P+++ PP P S+KEK AELK + LK
Sbjct: 52 AVKPEEHTVKP------EPLNA-------PPVPS---------SSKEKTAELKKQVPQLK 89
Query: 172 KKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDL 231
KK +FDP + WEKG+ VPF+FL LVFD+IS E+ RI+ITDIVCN+LRTVM TPEDL
Sbjct: 90 KKPSDFDPASITAWEKGQPVPFLFLCLVFDIISQESKRIVITDIVCNLLRTVMHCTPEDL 149
Query: 232 VPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASR 291
V VVYL+AN+IAPAHEG+ELGIG+ASI KALAEA G E+ +K QYQ+ GDLGLVAK SR
Sbjct: 150 VKVVYLSANRIAPAHEGVELGIGEASITKALAEAYGTNEAWIKTQYQKKGDLGLVAKESR 209
Query: 292 SSQSM--MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRL 349
SSQ M M KP+ LTI KVF+TFRLIAKE GK+SQEKKKN +KALLV+ATDCEPQYLIRL
Sbjct: 210 SSQPMIMMFKPEVLTIRKVFNTFRLIAKEYGKESQEKKKNHMKALLVSATDCEPQYLIRL 269
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
LQSKLRIG AE+TLLAALGQAAVY E+HSKPPP+IQSPLEEA+ IVKQV+SVLP Y+KI+
Sbjct: 270 LQSKLRIGYAEKTLLAALGQAAVYTEEHSKPPPDIQSPLEEASNIVKQVYSVLPDYDKII 329
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
ALLT+G+W L C+FTPG+PIGPML+K TKGVSEI+NKFQD+EFTCEYKYDGERAQIH
Sbjct: 330 SALLTEGLWMLPKKCNFTPGVPIGPMLSKATKGVSEILNKFQDVEFTCEYKYDGERAQIH 389
Query: 470 YLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQT 529
YLE+GSVEIYSR+AERNTGKFPDVV AVSRLKKP+V S +LDCEIVAYDR+ Q I FQ
Sbjct: 390 YLENGSVEIYSRHAERNTGKFPDVVAAVSRLKKPTVSSLILDCEIVAYDRQTQTIHSFQA 449
Query: 530 LSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT 589
LSTRARKNV + DIKVDVCI+AFD+LY NGQ LLQE LRVRREHLY SFEEEPGF QFAT
Sbjct: 450 LSTRARKNVEMEDIKVDVCIFAFDLLYLNGQALLQENLRVRREHLYASFEEEPGFLQFAT 509
Query: 590 TLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSL 649
T+TS D++EIQKFLD AV ASCEGLIIKT++ DATYEP KRSLNWLKLKKDY+++IGDSL
Sbjct: 510 TITSNDVEEIQKFLDQAVGASCEGLIIKTLNEDATYEPLKRSLNWLKLKKDYMDNIGDSL 569
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
DLVPIAAFHGRGKRTGVYGAFLLACYDS+NEEFQSICKIGTGFSEA+LEERSSSLRSKVI
Sbjct: 570 DLVPIAAFHGRGKRTGVYGAFLLACYDSDNEEFQSICKIGTGFSEAVLEERSSSLRSKVI 629
Query: 710 PKPRPYYRFADTISPDVWFEPTE 732
PKP+ YYRF ++I+PDVWFE +E
Sbjct: 630 PKPKAYYRFGESINPDVWFEASE 652
>gi|356542672|ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max]
Length = 776
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/602 (77%), Positives = 527/602 (87%)
Query: 142 PSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFD 201
P P K + +S ++EK AELK LKKK +FDP ++ WEKG+ VPF+FL L FD
Sbjct: 111 PEPLKVRHVSSSSFSQEKTAELKKQAPQLKKKPSDFDPASISAWEKGQPVPFLFLCLAFD 170
Query: 202 MISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKA 261
MIS E+GRI+ITDIVCN+LRTVM +TPEDLV VVYL+AN+IAPAHEG+ELGIGDASI+KA
Sbjct: 171 MISQESGRIVITDIVCNLLRTVMYSTPEDLVKVVYLSANRIAPAHEGMELGIGDASIVKA 230
Query: 262 LAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGK 321
LAEA GRTE +K QYQ+ GDLGLVAK SRSSQ MM KP+ LTITKVF+TFRLIAKE+GK
Sbjct: 231 LAEAYGRTEVWIKTQYQKKGDLGLVAKESRSSQPMMFKPEALTITKVFNTFRLIAKESGK 290
Query: 322 DSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPP 381
+SQEKKKN IKALLVAATDCEPQYLIRLLQ+KLRIG AE+TLLAALGQAAVY E+HSKPP
Sbjct: 291 ESQEKKKNHIKALLVAATDCEPQYLIRLLQTKLRIGYAEKTLLAALGQAAVYTEEHSKPP 350
Query: 382 PNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTK 441
P+IQSPLEEA++IVKQV+SVLP Y+KI+ ALLT+G+W L C+FTPG+PIGPML+K TK
Sbjct: 351 PDIQSPLEEASEIVKQVYSVLPDYDKIISALLTEGLWMLPKKCNFTPGVPIGPMLSKATK 410
Query: 442 GVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLK 501
GVSEI+NKFQD+EFTCEYKYDGERAQIHYLE+GSVEIYSRNAERNTGKFPDVV AVSRLK
Sbjct: 411 GVSEILNKFQDVEFTCEYKYDGERAQIHYLENGSVEIYSRNAERNTGKFPDVVAAVSRLK 470
Query: 502 KPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQP 561
KP+V SF+LDCEIVAYDR QKI FQ LSTRARKNV + DI V VCI+AFD+LY NGQ
Sbjct: 471 KPTVSSFILDCEIVAYDRSTQKIRSFQMLSTRARKNVEIEDITVGVCIFAFDLLYLNGQA 530
Query: 562 LLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR 621
LLQE LRVRREHLY SFEEEPGF QFATT+TS D++EIQ FLD AV ASCEGLIIKT++
Sbjct: 531 LLQENLRVRREHLYASFEEEPGFLQFATTITSNDVEEIQNFLDQAVGASCEGLIIKTLNE 590
Query: 622 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEE 681
DATYEPSKRSLNWLKLKKDY++SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYD++NEE
Sbjct: 591 DATYEPSKRSLNWLKLKKDYMDSIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDNDNEE 650
Query: 682 FQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPA 741
FQSICKIGTGFSEA+LEERSSSLRSKVIPKP+ YYRF +TI+PDVWFE +E E +
Sbjct: 651 FQSICKIGTGFSEAVLEERSSSLRSKVIPKPKAYYRFGETINPDVWFEASEVWEVKAADL 710
Query: 742 SI 743
+I
Sbjct: 711 TI 712
>gi|84453228|dbj|BAE71211.1| putative DNA ligase [Trifolium pratense]
Length = 682
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/596 (76%), Positives = 521/596 (87%)
Query: 148 KVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNET 207
K+ S S+K I+ELK I LKKK FDP V WEK + VPF+FL L FDMI+ E+
Sbjct: 24 KIRNTSSSSKGIISELKELIPQLKKKPPSFDPSSVVSWEKEKPVPFLFLCLAFDMINEES 83
Query: 208 GRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG 267
GRI+ TDIVCN+LRTV+ TTPEDLVPVVYL+AN+IAPAHEGLELGIGDASIIKALAEACG
Sbjct: 84 GRIVKTDIVCNLLRTVIYTTPEDLVPVVYLSANRIAPAHEGLELGIGDASIIKALAEACG 143
Query: 268 RTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKK 327
RTE ++ QY+E GDLGLVAKASRSSQSMMRKP+PLTI KVF TF LIAKE+GKDSQEKK
Sbjct: 144 RTEQQIRIQYKEKGDLGLVAKASRSSQSMMRKPEPLTIRKVFKTFHLIAKESGKDSQEKK 203
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP 387
KN IK+LLVAATDCEP Y+IRLLQ+KLRIG AEQTLLAALGQAAVY E+HSKPPP I+SP
Sbjct: 204 KNHIKSLLVAATDCEPLYIIRLLQTKLRIGYAEQTLLAALGQAAVYTEEHSKPPPEIKSP 263
Query: 388 LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIV 447
EEAA+IVK+V+SVLP Y+KIV ALLTDGVW L C FTPG+P+GPML+K TKGVSEI+
Sbjct: 264 FEEAAQIVKKVYSVLPDYDKIVAALLTDGVWELPKKCDFTPGVPVGPMLSKATKGVSEIL 323
Query: 448 NKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRS 507
NKFQD+EFTCEYKYDGERAQIHYLE+GSVEIYSRNAERNTGKFPDVV AVSRLKK +V S
Sbjct: 324 NKFQDVEFTCEYKYDGERAQIHYLENGSVEIYSRNAERNTGKFPDVVAAVSRLKKTTVSS 383
Query: 508 FVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQL 567
F+LDCE+VAYDR KQ+ILPFQ LSTRARKNV++SDIKV+VC++AFD+LY NGQ LLQE L
Sbjct: 384 FILDCELVAYDRAKQRILPFQVLSTRARKNVAISDIKVEVCVFAFDLLYLNGQALLQENL 443
Query: 568 RVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEP 627
R+RREHLY SFEEE GFFQFAT+ TS D++EIQKFLD A+DASCEGLIIKT+ DATYEP
Sbjct: 444 RIRREHLYASFEEESGFFQFATSTTSNDVEEIQKFLDQAIDASCEGLIIKTLHEDATYEP 503
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
SKRSLNWLKLKKDY+E+IGDSLDLVPI AFHGRGKRTGVYGAFLLACYD++NEEFQSI K
Sbjct: 504 SKRSLNWLKLKKDYMENIGDSLDLVPIGAFHGRGKRTGVYGAFLLACYDNDNEEFQSIAK 563
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
IGTGF E +LEERS+SLRSKVIPKP+ YY++ ++ +PDVWFE +E E + +I
Sbjct: 564 IGTGFKEEVLEERSTSLRSKVIPKPKSYYQYGESTNPDVWFEASEVWEVKAADLTI 619
>gi|8778834|gb|AAF79833.1|AC026875_13 T6D22.23 [Arabidopsis thaliana]
Length = 839
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/751 (62%), Positives = 563/751 (74%), Gaps = 76/751 (10%)
Query: 2 LLTLRSCYPLRLTPLSGNVVKPTSFSR--LSFSSH--HLFQKPKPLSSSLNPRRKMSSSA 57
+L +RS LR P + + FS +SFS HL LSS R MSSS
Sbjct: 1 MLAIRSSNYLRCIPSLCTKTQISQFSSVLISFSRQISHL-----RLSSC---HRAMSSSR 52
Query: 58 PNAFQVLMS---AAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEE 114
P+AF LMS AAAKKK P +++ S SP KR+ +TQ ++V E E
Sbjct: 53 PSAFDALMSNARAAAKKK---TPQTTNLSRSPNKRKIGETQDANLGKTIVSEGTLPKTE- 108
Query: 115 PSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKA 174
DL++P+S+ + D+ ++ + KK K K E+KS I LLKKK
Sbjct: 109 ---DLLEPVSDSANPRSDTSSIAEDSKTGAKKAKT-------LSKTDEMKSKIGLLKKKP 158
Query: 175 GEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
+FDP+ ++CWEKGERVPF+F++L FD+ISNE+GRI+ITDI+CNMLRTV+ TTPEDLV
Sbjct: 159 NDFDPEKMSCWEKGERVPFLFVALAFDLISNESGRIVITDILCNMLRTVIATTPEDLVAT 218
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
VYL+AN+IAPAHEG+ELGIG+++IIKA++EA GRTE HVKKQ E+GDLGLVAK SRS+Q
Sbjct: 219 VYLSANEIAPAHEGVELGIGESTIIKAISEAFGRTEDHVKKQNTELGDLGLVAKGSRSTQ 278
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
+MM KP+PLT+ KVFDTFR IAKE+GKDS EKKKNR+KALLVA TDCEP YL RLLQ+KL
Sbjct: 279 TMMFKPEPLTVVKVFDTFRQIAKESGKDSNEKKKNRMKALLVATTDCEPLYLTRLLQAKL 338
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
R+G + QT+LAALGQAAVYNE+HSKPPPN +SPLEEAAKIVKQVF+VLPVY+ IVPALL+
Sbjct: 339 RLGFSGQTVLAALGQAAVYNEEHSKPPPNTKSPLEEAAKIVKQVFTVLPVYDIIVPALLS 398
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
GVWNL TC+FT G+PIGPMLAKPTKGV+EI+NKFQD+ FTCEYKYDGERAQIH++EDG
Sbjct: 399 GGVWNLPKTCNFTLGVPIGPMLAKPTKGVAEILNKFQDIVFTCEYKYDGERAQIHFMEDG 458
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
+ EIYSRNAERNTGK+PDV LA+SRLKKPSV+SF+LDCE+VA+DREK+KILPFQ LSTRA
Sbjct: 459 TFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRA 518
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI 594
RKNV+++DIKV VCI+AFD+LY NGQ L+QE L++RRE LY+SFEE+PG+FQFAT +TS
Sbjct: 519 RKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLKIRREKLYESFEEDPGYFQFATAVTSN 578
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPI 654
D+DEIQKFLDA+VD IGDS+DLVPI
Sbjct: 579 DIDEIQKFLDASVDV----------------------------------GIGDSVDLVPI 604
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR- 713
AAFHGRGKRTGVYGAFLLACYD + EEFQSICKIGTGFS+AML+ERSSSLRS+VI P+
Sbjct: 605 AAFHGRGKRTGVYGAFLLACYDVDKEEFQSICKIGTGFSDAMLDERSSSLRSQVIATPKH 664
Query: 714 ------------PYYRFADTISPDVWFEPTE 732
YYR D+++PDVWFEPTE
Sbjct: 665 EFLFNCNDSNIQQYYRVGDSLNPDVWFEPTE 695
>gi|6579215|gb|AAF18258.1|AC011438_20 T23G18.1 [Arabidopsis thaliana]
Length = 794
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/751 (62%), Positives = 563/751 (74%), Gaps = 76/751 (10%)
Query: 2 LLTLRSCYPLRLTPLSGNVVKPTSFSR--LSFSSH--HLFQKPKPLSSSLNPRRKMSSSA 57
+L +RS LR P + + FS +SFS HL LSS R MSSS
Sbjct: 1 MLAIRSSNYLRCIPSLCTKTQISQFSSVLISFSRQISHL-----RLSSC---HRAMSSSR 52
Query: 58 PNAFQVLMS---AAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEE 114
P+AF LMS AAAKKK P +++ S SP KR+ +TQ ++V E E
Sbjct: 53 PSAFDALMSNARAAAKKK---TPQTTNLSRSPNKRKIGETQDANLGKTIVSEGTLPKTE- 108
Query: 115 PSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKA 174
DL++P+S+ + D+ ++ + KK K K E+KS I LLKKK
Sbjct: 109 ---DLLEPVSDSANPRSDTSSIAEDSKTGAKKAKT-------LSKTDEMKSKIGLLKKKP 158
Query: 175 GEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
+FDP+ ++CWEKGERVPF+F++L FD+ISNE+GRI+ITDI+CNMLRTV+ TTPEDLV
Sbjct: 159 NDFDPEKMSCWEKGERVPFLFVALAFDLISNESGRIVITDILCNMLRTVIATTPEDLVAT 218
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
VYL+AN+IAPAHEG+ELGIG+++IIKA++EA GRTE HVKKQ E+GDLGLVAK SRS+Q
Sbjct: 219 VYLSANEIAPAHEGVELGIGESTIIKAISEAFGRTEDHVKKQNTELGDLGLVAKGSRSTQ 278
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
+MM KP+PLT+ KVFDTFR IAKE+GKDS EKKKNR+KALLVA TDCEP YL RLLQ+KL
Sbjct: 279 TMMFKPEPLTVVKVFDTFRQIAKESGKDSNEKKKNRMKALLVATTDCEPLYLTRLLQAKL 338
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
R+G + QT+LAALGQAAVYNE+HSKPPPN +SPLEEAAKIVKQVF+VLPVY+ IVPALL+
Sbjct: 339 RLGFSGQTVLAALGQAAVYNEEHSKPPPNTKSPLEEAAKIVKQVFTVLPVYDIIVPALLS 398
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
GVWNL TC+FT G+PIGPMLAKPTKGV+EI+NKFQD+ FTCEYKYDGERAQIH++EDG
Sbjct: 399 GGVWNLPKTCNFTLGVPIGPMLAKPTKGVAEILNKFQDIVFTCEYKYDGERAQIHFMEDG 458
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
+ EIYSRNAERNTGK+PDV LA+SRLKKPSV+SF+LDCE+VA+DREK+KILPFQ LSTRA
Sbjct: 459 TFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRA 518
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI 594
RKNV+++DIKV VCI+AFD+LY NGQ L+QE L++RRE LY+SFEE+PG+FQFAT +TS
Sbjct: 519 RKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLKIRREKLYESFEEDPGYFQFATAVTSN 578
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPI 654
D+DEIQKFLDA+VD IGDS+DLVPI
Sbjct: 579 DIDEIQKFLDASVDV----------------------------------GIGDSVDLVPI 604
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR- 713
AAFHGRGKRTGVYGAFLLACYD + EEFQSICKIGTGFS+AML+ERSSSLRS+VI P+
Sbjct: 605 AAFHGRGKRTGVYGAFLLACYDVDKEEFQSICKIGTGFSDAMLDERSSSLRSQVIATPKH 664
Query: 714 ------------PYYRFADTISPDVWFEPTE 732
YYR D+++PDVWFEPTE
Sbjct: 665 EFLFNCNDSNIQQYYRVGDSLNPDVWFEPTE 695
>gi|357140737|ref|XP_003571920.1| PREDICTED: DNA ligase 1-like [Brachypodium distachyon]
Length = 918
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/611 (70%), Positives = 510/611 (83%), Gaps = 7/611 (1%)
Query: 133 SEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVP 192
S+ E + P SPKK K + N+ ++E+ + LKKK EFDP A W+ E VP
Sbjct: 250 SQSEDKTRPSSPKKSKTS-NATKSEER-----NTTFELKKKGSEFDPMAAAYWKPTEPVP 303
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F+FL+ D+ISNE+GRI+IT+I+ N+ RT++ TTPEDL+ VYL+AN+IAP HEG+ELG
Sbjct: 304 FLFLAQALDLISNESGRIVITEILSNVFRTIIATTPEDLLATVYLSANRIAPPHEGIELG 363
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTF 312
IGDASII+ALAEA GR E HVKK +E+GDLGLVAKASR SQ MM KP PLTI +V DTF
Sbjct: 364 IGDASIIRALAEAYGRKEEHVKKNLKELGDLGLVAKASRLSQKMMYKPKPLTIARVLDTF 423
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
R IAKE+GKDSQ+KK++ IK LLVAATDCEPQY+IRLLQSK+RIGLAE+T+ ALGQAAV
Sbjct: 424 RTIAKESGKDSQDKKRSHIKGLLVAATDCEPQYIIRLLQSKMRIGLAEKTVQMALGQAAV 483
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
Y+E+ S PP +QSP EEAAKI+KQ +SVLP+Y++IVP LL GVW L TC+F+ G+P+
Sbjct: 484 YSEEGS-PPAKVQSPFEEAAKIIKQAYSVLPIYDRIVPTLLEAGVWKLPETCNFSIGVPV 542
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
GPMLAK TK VSEI++KFQ +E+TCEYKYDGERAQIH +EDGSVEIYSRNAERNTGK+PD
Sbjct: 543 GPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIHCMEDGSVEIYSRNAERNTGKYPD 602
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAF 552
VV AVSR +KP+V+SFVLDCEIVAYDREK+KILPFQ LSTRARK V+++DIKV VC + F
Sbjct: 603 VVDAVSRFRKPAVKSFVLDCEIVAYDREKKKILPFQILSTRARKGVTINDIKVSVCTFGF 662
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCE 612
DILY NG+PLLQEQL+VRREHLY+SFEE PG FQ AT +TS DL+EIQKFLD AV++SCE
Sbjct: 663 DILYINGKPLLQEQLKVRREHLYNSFEEVPGIFQLATAITSNDLEEIQKFLDVAVNSSCE 722
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
GLIIKT+D+DATYEP+KRS NWLKLKKDY++S+GDSLDLVPIAAFHGRGKRTGVYG+FLL
Sbjct: 723 GLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSVGDSLDLVPIAAFHGRGKRTGVYGSFLL 782
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
ACYD NEE+Q+IC IGTGFSE LEERS+SLRSKVI KP+ YYRFADT PDVWFEP+E
Sbjct: 783 ACYDEQNEEYQTICNIGTGFSEQQLEERSTSLRSKVISKPKAYYRFADTTDPDVWFEPSE 842
Query: 733 RPETSNSPASI 743
E + SI
Sbjct: 843 VWEVKAADLSI 853
>gi|242034121|ref|XP_002464455.1| hypothetical protein SORBIDRAFT_01g018700 [Sorghum bicolor]
gi|241918309|gb|EER91453.1| hypothetical protein SORBIDRAFT_01g018700 [Sorghum bicolor]
Length = 905
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/691 (63%), Positives = 535/691 (77%), Gaps = 34/691 (4%)
Query: 54 SSSAPNAFQVLMSAAAKK-KPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVA 112
S + P+ V+ KK P+P +S +K+R + KTT+S
Sbjct: 211 SDTQPSGEGVVSHTDGKKGSPAPTKAKGQASQQEEKKRATSPKKAKTTDS---------- 260
Query: 113 EEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKK 172
+ +E+++ SPKK K + + AE K+ + LKK
Sbjct: 261 ----------------DSAKTEEKNTTRATSPKKAK------TTDSRKAEEKNTTLELKK 298
Query: 173 KAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV 232
K EFDP A W+ GE VPF+FL+ D+ISNE+GRI+IT+I+ N+ RTVM TTP+DL+
Sbjct: 299 KGSEFDPMAAAYWKPGEPVPFLFLARALDLISNESGRIVITEILSNVFRTVMATTPDDLL 358
Query: 233 PVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRS 292
VYL+AN+IAP HEG+ELGIGDAS+I+ALAEA GR E HVKK +E+GDLGLVAKASRS
Sbjct: 359 ATVYLSANRIAPPHEGIELGIGDASVIRALAEAYGRKEEHVKKDLKELGDLGLVAKASRS 418
Query: 293 SQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQS 352
SQ MM KP PLTI +V TFR IAKE+GKDSQ+KK+N +K LLVAATDCEPQY+ RLLQS
Sbjct: 419 SQKMMFKPKPLTIARVLSTFRAIAKESGKDSQDKKRNHMKGLLVAATDCEPQYITRLLQS 478
Query: 353 KLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPAL 412
K+RIGLAE+T+ ALGQAAVY++++S PP +QSP EEAAKI+KQ +SVLP+Y+KIVPA+
Sbjct: 479 KMRIGLAEKTVQMALGQAAVYSDKNSSPP-KVQSPFEEAAKIIKQAYSVLPIYDKIVPAI 537
Query: 413 LTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLE 472
L GVW L TC F+ G+P+GPMLAK TK VSEI++KFQ +E+TCEYKYDGERAQIH +E
Sbjct: 538 LEVGVWKLPETCKFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIHCME 597
Query: 473 DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLST 532
DGSVEIYSRNAERNTGK+PDVV AVSR +KP+V+SFVLDCEIVAYDREKQKILPFQ LST
Sbjct: 598 DGSVEIYSRNAERNTGKYPDVVDAVSRFRKPTVKSFVLDCEIVAYDREKQKILPFQILST 657
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
RARK V+++DIKV VC + FDILY NG+PLLQEQL++RREHLY+SFEE PG FQ AT +T
Sbjct: 658 RARKGVTINDIKVSVCTFGFDILYINGKPLLQEQLKIRREHLYNSFEEVPGVFQLATAIT 717
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
S DL+EIQKFLD AV++SCEGLIIKT+D+DATYEP+KRS NWLKLKKDY++SIGDSLDLV
Sbjct: 718 SNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSIGDSLDLV 777
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKP 712
PIAAF+GRGKRTGV+G+FLLACYD NEE+Q+IC IGTGFSE LEERS+SLRSKVI KP
Sbjct: 778 PIAAFYGRGKRTGVFGSFLLACYDEQNEEYQTICNIGTGFSEQQLEERSASLRSKVIEKP 837
Query: 713 RPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ YYRFADT+ PDVWFEP+E E + SI
Sbjct: 838 KAYYRFADTMDPDVWFEPSEVWEVKAADLSI 868
>gi|16905197|gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japonica Group]
gi|31432783|gb|AAP54376.1| DNA ligase, putative, expressed [Oryza sativa Japonica Group]
gi|40539108|gb|AAR87364.1| putative DNA ligase [Oryza sativa Japonica Group]
Length = 810
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/583 (72%), Positives = 494/583 (84%), Gaps = 1/583 (0%)
Query: 161 AELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNML 220
+E K + LKKK EF+P A W E VPF+FL+ D+ISNE+GRI+IT+I+ N+
Sbjct: 165 SEEKDTTLELKKKGSEFNPMAAAYWSPEEPVPFLFLARALDLISNESGRIVITEILSNVF 224
Query: 221 RTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEM 280
RTV+ TTPEDL+ VYL+AN+IAP HEG ELGIGDASII+ALAEA GR E HVKK +E+
Sbjct: 225 RTVIATTPEDLLATVYLSANRIAPPHEGTELGIGDASIIRALAEAYGRREEHVKKNLKEL 284
Query: 281 GDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD 340
GDLGLVAKASR SQ MM KP PLTI+ V FR IAKE+GKDSQ+KK+N IK LLVAATD
Sbjct: 285 GDLGLVAKASRLSQKMMYKPKPLTISHVLAKFRTIAKESGKDSQDKKRNHIKGLLVAATD 344
Query: 341 CEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFS 400
CEPQY+ RLLQSK+RIGLAE+T+ ALGQAAVY+E+HS PP IQSP EEAAKI+KQV+S
Sbjct: 345 CEPQYITRLLQSKMRIGLAEKTVQMALGQAAVYSEKHS-PPSKIQSPFEEAAKIIKQVYS 403
Query: 401 VLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYK 460
VLP+Y+KIVPA+L GVW L CSF+ G+P+GPMLAK TK VSEI++KFQ +E+TCEYK
Sbjct: 404 VLPIYDKIVPAILEVGVWKLPEICSFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYK 463
Query: 461 YDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDRE 520
YDGERAQIH LEDGSVEIYSRNAERNTGK+PDVV AVSR +KP+V+SFVLDCEIVAYDRE
Sbjct: 464 YDGERAQIHCLEDGSVEIYSRNAERNTGKYPDVVDAVSRFRKPTVKSFVLDCEIVAYDRE 523
Query: 521 KQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEE 580
K+KILPFQ LSTRARK V++SDIKV VC + FDILY NG+PLLQEQL+VRREHLY+SFEE
Sbjct: 524 KKKILPFQILSTRARKGVTISDIKVSVCTFGFDILYINGKPLLQEQLKVRREHLYNSFEE 583
Query: 581 EPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKD 640
PG FQ AT++TS DL+EIQKFLD AV++SCEGLIIKT+D+DATYEP+KRS NWLKLKKD
Sbjct: 584 VPGVFQLATSITSNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKD 643
Query: 641 YIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEER 700
Y++SIGDSLDLVPIAAFHGRGKRTGVYG+FLLACYD NEE+Q+IC IGTGFSE LEER
Sbjct: 644 YMDSIGDSLDLVPIAAFHGRGKRTGVYGSFLLACYDEQNEEYQTICNIGTGFSEQQLEER 703
Query: 701 SSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
S SLR+K IPKP+ YYRFADT+ PDVWFEP+E E + SI
Sbjct: 704 SVSLRTKAIPKPKAYYRFADTMDPDVWFEPSEVWEVKAADLSI 746
>gi|255565451|ref|XP_002523716.1| DNA ligase I, putative [Ricinus communis]
gi|223537020|gb|EEF38656.1| DNA ligase I, putative [Ricinus communis]
Length = 737
Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/586 (74%), Positives = 508/586 (86%), Gaps = 3/586 (0%)
Query: 160 IAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNET--GRILITDIVC 217
IAE+K I L K +FDP V WEKGE VPFIF+ F+ + +E GR IT++ C
Sbjct: 88 IAEMKGKIKSLMKNPKDFDPNEVVYWEKGENVPFIFVCSAFEYLEDEKEKGRGNITNVAC 147
Query: 218 NMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQY 277
NMLR+VM TTP+DL+ +VYL AN++APAHEG+ELGIG+A IIKALAEA GRTE VKK+Y
Sbjct: 148 NMLRSVMSTTPDDLLALVYLLANRVAPAHEGVELGIGEAMIIKALAEAFGRTEKQVKKEY 207
Query: 278 QEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVA 337
+ GDLG VA+ASRSSQSMMR+P+PLT++KVF+TF+LIAK++GKDSQ+KKKNRIKALLVA
Sbjct: 208 EGTGDLGRVAQASRSSQSMMRRPEPLTVSKVFNTFQLIAKDSGKDSQDKKKNRIKALLVA 267
Query: 338 ATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQ 397
ATDCEPQYLIRLLQ KLRI LA QTLLAALGQAAV++E H P NIQSPL+EAAKIVKQ
Sbjct: 268 ATDCEPQYLIRLLQGKLRINLAGQTLLAALGQAAVFSENHCTVPSNIQSPLDEAAKIVKQ 327
Query: 398 VFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC 457
V+SVLPVY++IVPALL DGVWNL TCSFTPG+P+GPMLAKP K V+EIV KFQ +FTC
Sbjct: 328 VYSVLPVYDRIVPALLNDGVWNLPKTCSFTPGVPVGPMLAKPAKSVTEIVEKFQG-KFTC 386
Query: 458 EYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY 517
EYKYDGERAQIH+LE+GSVEIYSRNAERNTGK+PDVV+A+SR KK SV+SFVLDCEIVAY
Sbjct: 387 EYKYDGERAQIHFLENGSVEIYSRNAERNTGKYPDVVVAISRSKKSSVKSFVLDCEIVAY 446
Query: 518 DREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDS 577
+R ++KILPFQ LSTR RKNV +SDIKVDVCIYAFD+LY NG+PL++EQL RR+ LYDS
Sbjct: 447 NRGEKKILPFQILSTRPRKNVVMSDIKVDVCIYAFDMLYLNGKPLIEEQLEDRRKLLYDS 506
Query: 578 FEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKL 637
FEE+P FQFAT +TS DL+EIQKFLDAAVDASCEGLIIKT+D+DATYEPSKRS NW+KL
Sbjct: 507 FEEDPEHFQFATAITSNDLEEIQKFLDAAVDASCEGLIIKTLDKDATYEPSKRSNNWVKL 566
Query: 638 KKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
KKDYIESIGDSLDLVPIAA+HGRGKRTGVYGAFLLACY+S+ EEF+SICKIGTGFSE +L
Sbjct: 567 KKDYIESIGDSLDLVPIAAYHGRGKRTGVYGAFLLACYNSSTEEFESICKIGTGFSEQVL 626
Query: 698 EERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
EERS+SLR+KV+P+P+ YYR+ + I PDVWFEPTE E + +I
Sbjct: 627 EERSNSLRAKVVPQPKSYYRYEEKIKPDVWFEPTEVWEVKAADLTI 672
>gi|414870977|tpg|DAA49534.1| TPA: putative DNA ligase family protein [Zea mays]
Length = 909
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/702 (63%), Positives = 538/702 (76%), Gaps = 26/702 (3%)
Query: 66 SAAAKKKPSPQPNSSSSSSSPKKRRTL----DTQTPKTTNSVVGEKIQEVAEEP-SNDLV 120
+AA +KP P P S +SSP K L T + K+ ++ E P S
Sbjct: 147 AAAVAEKP-PSPARSKRASSPAKSPKLLPDGSTSSAKSKGPAALAQLDAAKENPPSPKRS 205
Query: 121 KPISNQIDNPIDSE-------KESQPTPPSPKKRKVNVNSVSAKEKIAELKS-------- 165
K ++ + D E + + PSP K K + K++ A K
Sbjct: 206 KTLAAKSDTQPSGEGVVGLGHTDGKKGSPSPTKAKGQASQSEEKKRAASPKKAKTTDSPK 265
Query: 166 ---NIVL-LKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLR 221
NI L LKKK EFDP VA W+ GE VPF+FL+ D+ISNE+GRI+IT+I+ N+ R
Sbjct: 266 TEKNITLELKKKGSEFDPMAVAYWKPGEPVPFLFLARALDLISNESGRIVITEILSNVFR 325
Query: 222 TVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMG 281
TVM TTP+DL+ VYL+AN+IAP HEG+ELGIGDAS+I+ALAEA GR E HVKK +E+G
Sbjct: 326 TVMATTPDDLLATVYLSANRIAPPHEGIELGIGDASVIRALAEAYGRKEEHVKKDLKELG 385
Query: 282 DLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC 341
DLGLVAKASRSSQ MM KP PLTI +V TFR IAKE+GKDSQ+KK+N +K LLVAATDC
Sbjct: 386 DLGLVAKASRSSQKMMFKPKPLTIARVLSTFRTIAKESGKDSQDKKRNHMKGLLVAATDC 445
Query: 342 EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSV 401
EPQY+ RLLQSK+RIGLAE+T+ ALGQAAVY +++ PP +QSP EEAAKI+KQ +SV
Sbjct: 446 EPQYITRLLQSKMRIGLAEKTVQMALGQAAVYADKNPLPP-KVQSPFEEAAKIIKQAYSV 504
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
LP+Y+KIVPA+L GVW L TC F+ G+P+GPMLAK TK VSEI++KFQ +E+TCEYKY
Sbjct: 505 LPIYDKIVPAILEVGVWKLPETCKFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKY 564
Query: 462 DGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK 521
DGERAQIH +EDGSVEIYSRNAERNTGK+PDVV AVSR +K +V+SFVLDCEIVAYDREK
Sbjct: 565 DGERAQIHCMEDGSVEIYSRNAERNTGKYPDVVDAVSRFRKATVKSFVLDCEIVAYDREK 624
Query: 522 QKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEE 581
QKILPFQ LSTRARK V+++DIKV VC + FDILY NG+PLLQEQL++RREHLY+SFEE
Sbjct: 625 QKILPFQILSTRARKGVTINDIKVSVCTFGFDILYINGKPLLQEQLKIRREHLYNSFEEV 684
Query: 582 PGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDY 641
PG F+ AT +TS DL+EIQKFLD AV++SCEGLIIKT+D+DATYEP+KRS NWLKLKKDY
Sbjct: 685 PGVFKLATAITSNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDY 744
Query: 642 IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERS 701
++SIGDSLDLVPIAAF+GRGKRTGV+G+FLLACYD NEE+Q+IC IGTGFSE LEERS
Sbjct: 745 MDSIGDSLDLVPIAAFYGRGKRTGVFGSFLLACYDEQNEEYQTICNIGTGFSEQQLEERS 804
Query: 702 SSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+SLRSKVI KP+ YYRF DT++PDVWFEP+E E + SI
Sbjct: 805 ASLRSKVIEKPKAYYRFGDTMNPDVWFEPSEVWEVKAADLSI 846
>gi|218184789|gb|EEC67216.1| hypothetical protein OsI_34114 [Oryza sativa Indica Group]
gi|222613048|gb|EEE51180.1| hypothetical protein OsJ_31972 [Oryza sativa Japonica Group]
Length = 627
Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/561 (74%), Positives = 482/561 (85%), Gaps = 1/561 (0%)
Query: 183 ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKI 242
A W E VPF+FL+ D+ISNE+GRI+IT+I+ N+ RTV+ TTPEDL+ VYL+AN+I
Sbjct: 4 AYWSPEEPVPFLFLARALDLISNESGRIVITEILSNVFRTVIATTPEDLLATVYLSANRI 63
Query: 243 APAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP 302
AP HEG ELGIGDASII+ALAEA GR E HVKK +E+GDLGLVAKASR SQ MM KP P
Sbjct: 64 APPHEGTELGIGDASIIRALAEAYGRREEHVKKNLKELGDLGLVAKASRLSQKMMYKPKP 123
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI+ V FR IAKE+GKDSQ+KK+N IK LLVAATDCEPQY+ RLLQSK+RIGLAE+T
Sbjct: 124 LTISHVLAKFRTIAKESGKDSQDKKRNHIKGLLVAATDCEPQYITRLLQSKMRIGLAEKT 183
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+ ALGQAAVY+E+HS PP IQSP EEAAKI+KQV+SVLP+Y+KIVPA+L GVW L
Sbjct: 184 VQMALGQAAVYSEKHS-PPSKIQSPFEEAAKIIKQVYSVLPIYDKIVPAILEVGVWKLPE 242
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
CSF+ G+P+GPMLAK TK VSEI++KFQ +E+TCEYKYDGERAQIH LEDGSVEIYSRN
Sbjct: 243 ICSFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIHCLEDGSVEIYSRN 302
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
AERNTGK+PDVV AVSR +KP+V+SFVLDCEIVAYDREK+KILPFQ LSTRARK V++SD
Sbjct: 303 AERNTGKYPDVVDAVSRFRKPTVKSFVLDCEIVAYDREKKKILPFQILSTRARKGVTISD 362
Query: 543 IKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
IKV VC + FDILY NG+PLLQEQL+VRREHLY+SFEE PG FQ AT++TS DL+EIQKF
Sbjct: 363 IKVSVCTFGFDILYINGKPLLQEQLKVRREHLYNSFEEVPGVFQLATSITSNDLEEIQKF 422
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
LD AV++SCEGLIIKT+D+DATYEP+KRS NWLKLKKDY++SIGDSLDLVPIAAFHGRGK
Sbjct: 423 LDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSIGDSLDLVPIAAFHGRGK 482
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
RTGVYG+FLLACYD NEE+Q+IC IGTGFSE LEERS SLR+K IPKP+ YYRFADT+
Sbjct: 483 RTGVYGSFLLACYDEQNEEYQTICNIGTGFSEQQLEERSVSLRTKAIPKPKAYYRFADTM 542
Query: 723 SPDVWFEPTERPETSNSPASI 743
PDVWFEP+E E + SI
Sbjct: 543 DPDVWFEPSEVWEVKAADLSI 563
>gi|115482648|ref|NP_001064917.1| Os10g0489200 [Oryza sativa Japonica Group]
gi|113639526|dbj|BAF26831.1| Os10g0489200 [Oryza sativa Japonica Group]
Length = 828
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/558 (73%), Positives = 475/558 (85%), Gaps = 1/558 (0%)
Query: 161 AELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNML 220
+E K + LKKK EF+P A W E VPF+FL+ D+ISNE+GRI+IT+I+ N+
Sbjct: 271 SEEKDTTLELKKKGSEFNPMAAAYWSPEEPVPFLFLARALDLISNESGRIVITEILSNVF 330
Query: 221 RTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEM 280
RTV+ TTPEDL+ VYL+AN+IAP HEG ELGIGDASII+ALAEA GR E HVKK +E+
Sbjct: 331 RTVIATTPEDLLATVYLSANRIAPPHEGTELGIGDASIIRALAEAYGRREEHVKKNLKEL 390
Query: 281 GDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD 340
GDLGLVAKASR SQ MM KP PLTI+ V FR IAKE+GKDSQ+KK+N IK LLVAATD
Sbjct: 391 GDLGLVAKASRLSQKMMYKPKPLTISHVLAKFRTIAKESGKDSQDKKRNHIKGLLVAATD 450
Query: 341 CEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFS 400
CEPQY+ RLLQSK+RIGLAE+T+ ALGQAAVY+E+HS PP IQSP EEAAKI+KQV+S
Sbjct: 451 CEPQYITRLLQSKMRIGLAEKTVQMALGQAAVYSEKHS-PPSKIQSPFEEAAKIIKQVYS 509
Query: 401 VLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYK 460
VLP+Y+KIVPA+L GVW L CSF+ G+P+GPMLAK TK VSEI++KFQ +E+TCEYK
Sbjct: 510 VLPIYDKIVPAILEVGVWKLPEICSFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYK 569
Query: 461 YDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDRE 520
YDGERAQIH LEDGSVEIYSRNAERNTGK+PDVV AVSR +KP+V+SFVLDCEIVAYDRE
Sbjct: 570 YDGERAQIHCLEDGSVEIYSRNAERNTGKYPDVVDAVSRFRKPTVKSFVLDCEIVAYDRE 629
Query: 521 KQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEE 580
K+KILPFQ LSTRARK V++SDIKV VC + FDILY NG+PLLQEQL+VRREHLY+SFEE
Sbjct: 630 KKKILPFQILSTRARKGVTISDIKVSVCTFGFDILYINGKPLLQEQLKVRREHLYNSFEE 689
Query: 581 EPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKD 640
PG FQ AT++TS DL+EIQKFLD AV++SCEGLIIKT+D+DATYEP+KRS NWLKLKKD
Sbjct: 690 VPGVFQLATSITSNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKD 749
Query: 641 YIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEER 700
Y++SIGDSLDLVPIAAFHGRGKRTGVYG+FLLACYD NEE+Q+IC IGTGFSE LEER
Sbjct: 750 YMDSIGDSLDLVPIAAFHGRGKRTGVYGSFLLACYDEQNEEYQTICNIGTGFSEQQLEER 809
Query: 701 SSSLRSKVIPKPRPYYRF 718
S SLR+K IPKP+ + F
Sbjct: 810 SVSLRTKAIPKPKLCFHF 827
>gi|302781344|ref|XP_002972446.1| hypothetical protein SELMODRAFT_97073 [Selaginella moellendorffii]
gi|300159913|gb|EFJ26532.1| hypothetical protein SELMODRAFT_97073 [Selaginella moellendorffii]
Length = 638
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/567 (68%), Positives = 466/567 (82%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
FDP+ A WE E VPF+F + V DMISNE+GR+++T+I+CN RTV+ TTP+DL+PVVY
Sbjct: 9 FDPRKAAFWEDKEPVPFLFFARVMDMISNESGRLVMTEILCNAFRTVIATTPQDLLPVVY 68
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ANKIAPAH+G+ELGIGDASIIKALA+A GR E +K Q + +GDLGLVAKASRS+Q +
Sbjct: 69 LSANKIAPAHDGIELGIGDASIIKALADAFGRKEDQIKSQMKALGDLGLVAKASRSTQRL 128
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M K PLT KV +TFR IAKE+GKDSQEKK++R+K+LLVAATDCEPQYL+RLLQ+KLR+
Sbjct: 129 MFKHPPLTCAKVLETFRSIAKESGKDSQEKKRSRMKSLLVAATDCEPQYLVRLLQAKLRV 188
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
GLAE T+L AL QAAVY EQ + LEEAA+I+KQ +SVLP++EKIVP LLTDG
Sbjct: 189 GLAEATVLVALAQAAVYAEQPPVSSSMLPGRLEEAAEIMKQTYSVLPIFEKIVPILLTDG 248
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ L C+FT G+P+GPMLAKPTKGVSEI++KFQ+ FTCEYKYDGERAQIHY EDG V
Sbjct: 249 ISKLPEVCAFTVGVPVGPMLAKPTKGVSEILDKFQNTVFTCEYKYDGERAQIHYFEDGRV 308
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
E+YSRNAERNTGKFPDV ++S KP V SFV+DCEIVAYD+E KILPFQ LSTRARK
Sbjct: 309 EVYSRNAERNTGKFPDVTSSISGYMKPEVSSFVMDCEIVAYDKESNKILPFQVLSTRARK 368
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
V LSDIKV V I+AFD+LY NG+ LLQEQL RRE LY SF E+PG FQFAT S +L
Sbjct: 369 GVILSDIKVKVLIFAFDLLYLNGRVLLQEQLVRRRELLYQSFIEKPGEFQFATATNSKEL 428
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAA 656
+EIQ FLD A++ SCEGLI+KT+++DATYEP+KRS NWLKLKKDY+++IGDSLDLVPI A
Sbjct: 429 EEIQSFLDDAINHSCEGLIVKTLEKDATYEPAKRSNNWLKLKKDYMDTIGDSLDLVPIGA 488
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYY 716
FHGRGKR GVYGAFLLACYD + EE+QSICKIGTGF+EA+LEERS++LR VI PRPYY
Sbjct: 489 FHGRGKRVGVYGAFLLACYDPDKEEYQSICKIGTGFTEAVLEERSNTLRKHVIDTPRPYY 548
Query: 717 RFADTISPDVWFEPTERPETSNSPASI 743
R+ +T++ DVWF+P E E + SI
Sbjct: 549 RYGETLAVDVWFDPVEVWEVKAADLSI 575
>gi|302805053|ref|XP_002984278.1| hypothetical protein SELMODRAFT_119719 [Selaginella moellendorffii]
gi|300148127|gb|EFJ14788.1| hypothetical protein SELMODRAFT_119719 [Selaginella moellendorffii]
Length = 638
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/567 (68%), Positives = 467/567 (82%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
FDP+ A WE E VPF+F + V DMISNE+GR+++T+I+CN RTV+ TTP+DL+PVVY
Sbjct: 9 FDPRKAAFWEDKEPVPFLFFARVMDMISNESGRLVMTEILCNAFRTVIATTPQDLLPVVY 68
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ANKIAPAH+G+ELGIGDASIIKALA+A GR E +K Q + +GDLGLVAKASRS+Q +
Sbjct: 69 LSANKIAPAHDGIELGIGDASIIKALADAFGRKEDQIKSQMKALGDLGLVAKASRSTQRL 128
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M K PLT KV +TFR IAKE+GKDSQEKK++R+K+LLVAATDCEPQYL+RLLQ+KLR+
Sbjct: 129 MFKHPPLTCAKVLETFRSIAKESGKDSQEKKRSRMKSLLVAATDCEPQYLVRLLQAKLRV 188
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
GLAE T+L AL QAAVY EQ + LEEAA+I+KQ +SVLP++EKIVP LLTDG
Sbjct: 189 GLAEATVLVALAQAAVYAEQPPVSSSMLPGRLEEAAEIMKQTYSVLPIFEKIVPILLTDG 248
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ L C+FT G+P+GPMLAKPTKGVSEI++KFQ+ FTCEYKYDGERAQIHY EDG V
Sbjct: 249 ISKLPEVCAFTVGVPVGPMLAKPTKGVSEILDKFQNTVFTCEYKYDGERAQIHYFEDGRV 308
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
E+YSRNAERNTGKFPDV ++S KKP V SFV+DCEIVAYD+E KILPFQ LSTRARK
Sbjct: 309 EVYSRNAERNTGKFPDVTSSISGYKKPEVSSFVMDCEIVAYDKESNKILPFQVLSTRARK 368
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
V LSDIKV V I+AFD+LY NG+ LLQEQL RRE LY SF E+PG FQFAT + +L
Sbjct: 369 GVILSDIKVKVLIFAFDLLYLNGRVLLQEQLVRRRELLYQSFIEKPGEFQFATATNTKEL 428
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAA 656
+EIQ FL+ A++ SCEGLI+KT+++DATYEP+KRS NWLKLKKDY+++IGDSLDLVPI A
Sbjct: 429 EEIQSFLNDAINHSCEGLIVKTLEKDATYEPAKRSNNWLKLKKDYMDTIGDSLDLVPIGA 488
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYY 716
FHGRGKR GVYGAFLLACYD + EE+QSICKIGTGF+EA+LEERS++LR VI PRPYY
Sbjct: 489 FHGRGKRVGVYGAFLLACYDPDKEEYQSICKIGTGFTEAVLEERSNTLRKHVIDTPRPYY 548
Query: 717 RFADTISPDVWFEPTERPETSNSPASI 743
R+ +T++ DVWF+P E E + SI
Sbjct: 549 RYGETLAVDVWFDPVEVWEVKAADLSI 575
>gi|168050205|ref|XP_001777550.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671035|gb|EDQ57593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/578 (64%), Positives = 464/578 (80%), Gaps = 1/578 (0%)
Query: 167 IVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMET 226
+VLL KK +FDP+ A W+ G+ VPF+FL+ D+IS+E+GR+ +T+I+CN+ RTV+ T
Sbjct: 15 VVLLTKKETDFDPEAAAFWKPGQPVPFLFLASALDIISDESGRLAMTNILCNVFRTVIAT 74
Query: 227 TPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLV 286
TP+DL+ VV L+AN+IAPAHEG+ELGIGDA+I++ L EA GR +K Q + +GDLGLV
Sbjct: 75 TPKDLLAVVTLSANRIAPAHEGVELGIGDAAIVRVLTEAYGRKADQIKAQMKTLGDLGLV 134
Query: 287 AKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYL 346
AKASR+SQ M K PLT KV DTFR IAK++G SQ++K+ R+KALLVAAT+CEP YL
Sbjct: 135 AKASRTSQRTMFKSQPLTCAKVLDTFREIAKDSGNQSQDRKRGRMKALLVAATECEPLYL 194
Query: 347 IRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYE 406
+RLLQSKLRIGLAE+T+LAAL AAV +E P + + LEEA +I+K+ +SVLP+YE
Sbjct: 195 VRLLQSKLRIGLAEKTVLAALAHAAVLSEVPRVPANQLTARLEEAEEIMKETYSVLPIYE 254
Query: 407 KIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
KI+ A+L G+ L C+FT GIP+GPMLAKPT GVSE++NKFQDMEF+CEYKYDGERA
Sbjct: 255 KIISAILEHGIRKLPEVCNFTLGIPVGPMLAKPTTGVSEVLNKFQDMEFSCEYKYDGERA 314
Query: 467 QIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP 526
Q+HYL+ G++EIYSRNAE NTGKFPD+V A+ R K ++VLDCE+VAYDREK KILP
Sbjct: 315 QVHYLQGGTIEIYSRNAEHNTGKFPDIVAAMPRCMKTGTETYVLDCEVVAYDREKNKILP 374
Query: 527 FQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
FQ LSTRARK V LSDIK+ VC++AFD+LY NG+PLL+EQL VRRE LY SF+E PG FQ
Sbjct: 375 FQVLSTRARKGVVLSDIKIQVCLFAFDLLYLNGRPLLKEQLNVRRELLYSSFQEIPGEFQ 434
Query: 587 FATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES-I 645
FAT S DL+EIQKFL+ A++ SCEGLI+KT+ +DATYEP+KRS NWLKLKKDY+ +
Sbjct: 435 FATAKNSNDLEEIQKFLEDAINDSCEGLIVKTLSKDATYEPAKRSNNWLKLKKDYMNTGG 494
Query: 646 GDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR 705
GDSLDLVPI AF+GRGKR GVYGAFLLACYD + EEFQSICKIGTGF+EA+LEERS +L+
Sbjct: 495 GDSLDLVPIGAFYGRGKRVGVYGAFLLACYDEDREEFQSICKIGTGFTEAVLEERSVTLK 554
Query: 706 SKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ VIP+PR YYR+ +TI DVWFE E E + SI
Sbjct: 555 NHVIPQPRSYYRYGETIGVDVWFEDVEVWEVKAADLSI 592
>gi|15222077|ref|NP_175351.1| ATP-dependent DNA ligase [Arabidopsis thaliana]
gi|332194289|gb|AEE32410.1| ATP-dependent DNA ligase [Arabidopsis thaliana]
Length = 657
Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/614 (61%), Positives = 473/614 (77%), Gaps = 37/614 (6%)
Query: 135 KESQPTPPSPKKRKVNVNSVSAK----EKIAELKSNIVLLKKKAGEFDPKMVACWEKGER 190
+E+ TPP+ K V +K +++ +LKS I LLKKK
Sbjct: 13 EETVDTPPTRVDDKTLVLISDSKKPKSDRVTKLKSKIGLLKKKP---------------- 56
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
E+GRI+IT I+CNMLRTV+ TTP+DL+P VYLAAN+IAPAHEG++
Sbjct: 57 --------------TESGRIVITHILCNMLRTVIATTPDDLLPTVYLAANEIAPAHEGIK 102
Query: 251 LGIGDAS-IIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
LG+G S IIKA++EA GRTESHV++QY ++GDLGLVA SRSSQ+M+ P PLT+ KV
Sbjct: 103 LGMGKGSYIIKAISEAFGRTESHVEQQYTQLGDLGLVANGSRSSQTMIFMPKPLTVVKVA 162
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
DT RLIAKE+GK S++KKK+ +KALLVA TDCEP YL RLLQ LR+G + QT+LAALGQ
Sbjct: 163 DTLRLIAKESGKGSKDKKKDLMKALLVATTDCEPLYLTRLLQDNLRLGFSRQTVLAALGQ 222
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
AAVYNE+HSKPPPNI++PL+EAA IVK+VFS+LPVY+ IV ALLT GVWNL TC+ T G
Sbjct: 223 AAVYNEEHSKPPPNIKNPLDEAATIVKEVFSMLPVYDIIVGALLTSGVWNLPKTCNLTLG 282
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
+P+ PMLAK T V I+ KF+D FT EYKYDGERAQI+Y+EDG+VEI+SR+AERNTGK
Sbjct: 283 VPVRPMLAKATTRVDLILEKFKDTVFTAEYKYDGERAQIYYMEDGTVEIFSRHAERNTGK 342
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PDV L +SRLKKP+V+SF+LDCE+V ++REK+KILP Q STRA KNV++SDIKV VC+
Sbjct: 343 YPDVALVLSRLKKPTVKSFILDCEVVTFNREKEKILPLQ--STRAHKNVNVSDIKVGVCV 400
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+AFDILY NGQ L+ E L +RRE L+DSFEE+ G+FQFAT LTS D+ E+Q+FL A++D
Sbjct: 401 FAFDILYLNGQLLIHENLNIRREKLHDSFEEDLGYFQFATALTSNDIGELQEFLKASIDI 460
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
CEGL+IK++ +ATYEP+KRS NWLKLKKDY+++IGDS+DLVPIA FHGRGKRTG +GA
Sbjct: 461 GCEGLMIKSLYSNATYEPAKRSNNWLKLKKDYMDNIGDSVDLVPIATFHGRGKRTGFFGA 520
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
+LLACYD + EEFQSICKIGT FS+ L++ SSSL SKVI P+ YY+ + ++PDVW E
Sbjct: 521 YLLACYDVDKEEFQSICKIGTEFSDVELQDLSSSLCSKVIATPKQYYQVDNDLNPDVWLE 580
Query: 730 PTERPETSNSPASI 743
PTE E + ++
Sbjct: 581 PTEVWEVKAADLTV 594
>gi|145351064|ref|XP_001419907.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580140|gb|ABO98200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 664
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/578 (54%), Positives = 409/578 (70%), Gaps = 4/578 (0%)
Query: 176 EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
E+DP W+ G+ P+++L+ +F+ I+ T R+ I +++ N RT++ + P DL+ V
Sbjct: 35 EYDPVSKVTWKLGDATPYLYLANIFESIAETTKRLEIAELLTNAFRTILASKPTDLLAAV 94
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YLA+N I P HEG++LGIGDA++IKALAEA GR + +K Y+E GDLG VA ASRS+Q
Sbjct: 95 YLASNTIHPQHEGIDLGIGDATLIKALAEATGRKDESIKNDYKEAGDLGSVAMASRSTQR 154
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
MM P PLT+T V FR IA G+ S ++KK IK LLV+A +CE Y+IR LQ KLR
Sbjct: 155 MMFPPPPLTVTGVLKEFRAIATTDGEKSVDRKKGMIKKLLVSARECEAGYVIRSLQGKLR 214
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPN--IQSPLEEAAKIVKQVFSVLPVYEKIVPALL 413
IGLA+QT+ +L A V + K + L A ++KQVFS P +++IVPALL
Sbjct: 215 IGLAQQTVTQSLAHAIVLHGDAGKKKKGAELADALGAAFDVLKQVFSECPTFDQIVPALL 274
Query: 414 TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
G+ L C FTPG+P+ PMLAKPT GVSE++ +F+D+ FTCEYKYDGERAQIH E+
Sbjct: 275 EVGIEGLQERCKFTPGVPVKPMLAKPTTGVSEVLKRFEDIAFTCEYKYDGERAQIHLQEN 334
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
G V I+SRN E NT KFPD++ + R KP V+S V+DCE VAYDRE+ KILPFQ LSTR
Sbjct: 335 GKVSIFSRNQEDNTAKFPDLINGLKRYIKPHVKSVVIDCEAVAYDREQNKILPFQILSTR 394
Query: 534 ARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
+KN+ S+IKV V +YAFD LY NG+PLL+E + RRE LY +F+E PG F F T TS
Sbjct: 395 GKKNIVESEIKVKVALYAFDCLYLNGEPLLREPMHKRREALYSAFQEVPGEFFFVTEKTS 454
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
D+DE+Q FLD ++ + EGLI+KT+ DATYEPSKRSLNWLKLKKDY+E GDSLDLVP
Sbjct: 455 RDIDELQGFLDESIAENTEGLIVKTL--DATYEPSKRSLNWLKLKKDYMEGCGDSLDLVP 512
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR 713
I A+ GRGKRTGVYGA+LLAC+D + EE+QSICKIGTGFSE +LEE ++++ VI PR
Sbjct: 513 IGAWLGRGKRTGVYGAYLLACFDEDGEEYQSICKIGTGFSEVILEELANAMNPHVIDGPR 572
Query: 714 PYYRFADTISPDVWFEPTERPETSNSPASIVYDSQITC 751
YY+ +D + PDVWFEP + E + SI Q C
Sbjct: 573 SYYKVSDAMKPDVWFEPKQVWEVKAADLSISPVHQAAC 610
>gi|308808378|ref|XP_003081499.1| putative DNA ligase [Oryza sativa (ISS) [Ostreococcus tauri]
gi|116059962|emb|CAL56021.1| putative DNA ligase [Oryza sativa (ISS) [Ostreococcus tauri]
Length = 740
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/557 (56%), Positives = 401/557 (71%), Gaps = 4/557 (0%)
Query: 176 EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
E+D + W++G+ P+++L+ VF+ IS T R+ I +++ N RT++ + P DL+ V
Sbjct: 150 EYDAESKVTWKRGDPTPYLYLANVFESISETTKRLEIAELLTNAFRTILASRPGDLLAAV 209
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YLA+N I P H+G++LGIGDA++IKALAEA GR + +K Y++ GDLG VA ASRS+Q
Sbjct: 210 YLASNTIHPQHKGIDLGIGDATLIKALAEATGRKDESIKNDYRDAGDLGKVAMASRSTQR 269
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
MM P PLT++ V FR IA G+ S ++KK IK LLV+A +CE Y+IR LQ KLR
Sbjct: 270 MMFPPPPLTVSGVLKEFRTIATTEGEKSVDRKKALIKKLLVSARECEAGYVIRSLQGKLR 329
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKI--VKQVFSVLPVYEKIVPALL 413
IGLA+QT+ AL A V + + K A +KQVFS P +++IVPALL
Sbjct: 330 IGLAQQTVTMALAHAIVLHGEAGKTKKGADLADALGAAFDTLKQVFSECPSFDEIVPALL 389
Query: 414 TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
GV L C FTPG+P+ PMLAKPT GV E++ +F+D+ FTCEYKYDGERAQIH ED
Sbjct: 390 EVGVEGLPERCKFTPGVPVKPMLAKPTTGVLEVLKRFEDIAFTCEYKYDGERAQIHLQED 449
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
G V I+SRN E NT KFPD++ + R KP V+S V+DCE VAYDRE+ KILPFQ LSTR
Sbjct: 450 GKVSIFSRNQEDNTAKFPDLISGLQRYIKPHVKSVVIDCEAVAYDREQDKILPFQILSTR 509
Query: 534 ARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
+KN+ S+IKV V +YAFD LY NG+PLL+E + RRE LY +FEE PG F F T TS
Sbjct: 510 GKKNIVESEIKVQVALYAFDCLYLNGEPLLREPMSKRREALYSAFEEVPGEFFFVTEKTS 569
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
D++E+Q FLD ++ A+ EGLI+KT+ DATYEPSKRSLNWLKLKKDY+E GDSLDLVP
Sbjct: 570 RDVEELQVFLDESIQANTEGLIVKTL--DATYEPSKRSLNWLKLKKDYMEGCGDSLDLVP 627
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR 713
I A+ GRGKRTGVYGA+LLACYD + EE+QSICKIGTGFSE +LEE ++++ VI PR
Sbjct: 628 IGAWVGRGKRTGVYGAYLLACYDEDGEEYQSICKIGTGFSEVVLEELANAMNPHVIDAPR 687
Query: 714 PYYRFADTISPDVWFEP 730
YY+ +D + PDVWFEP
Sbjct: 688 SYYKVSDAMKPDVWFEP 704
>gi|303276855|ref|XP_003057721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460378|gb|EEH57672.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 682
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/576 (55%), Positives = 408/576 (70%), Gaps = 11/576 (1%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMET-TPEDLVPVV 235
+DP W+ GE VP++FL+ +F+ IS T R+ I +++ N RT++ TPEDL+ V
Sbjct: 45 YDPAKPVTWKSGEPVPYLFLAEIFESISETTKRLEIAELLTNAFRTILAAGTPEDLLAAV 104
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YLA+N IAP HEG++LGIGDA++IK LAEA GR ES +K Y + GDLG+VA SRS+QS
Sbjct: 105 YLASNTIAPQHEGVDLGIGDATLIKMLAEATGRKESAIKSDYTKEGDLGIVAMMSRSTQS 164
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
MM P LTI V FR IAK G S ++KK +IK LLVAA +CE Y+ R LQ KLR
Sbjct: 165 MMFAPPKLTIVGVLKEFRAIAKTEGTKSVDQKKGKIKKLLVAARECEAGYVTRSLQGKLR 224
Query: 356 IGLAEQTLLAALGQAAVYNEQ-------HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
IGLA+QT+ AL A V + + K + L A ++KQVFS P +++I
Sbjct: 225 IGLAQQTVTTALAHAVVLHAETKDGKCADGKTHAELADRLGAAVDVLKQVFSECPSFDEI 284
Query: 409 VPALLTD-GVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQ 467
VPALL D G+ L+ C F PG+P+ PMLAKPT GVSE++ +F D+EFTCEYKYDGERAQ
Sbjct: 285 VPALLMDGGIDKLAERCHFRPGVPVKPMLAKPTCGVSEVLQRFSDVEFTCEYKYDGERAQ 344
Query: 468 IHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
IH EDG+V+I+SRN E NT KFPDV+ A+ + V+S V+DCE VA+DR + KILPF
Sbjct: 345 IHLCEDGAVKIFSRNQEDNTPKFPDVIRALPTYLQEGVKSVVIDCEAVAFDRAEGKILPF 404
Query: 528 QTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
Q LSTR RKN+ DIKV+V +YAFD LY NG+ LLQ+ + RR+ LY +F+E PG F F
Sbjct: 405 QILSTRGRKNIDEKDIKVNVALYAFDCLYLNGENLLQKPMMERRKALYSAFKEVPGEFFF 464
Query: 588 ATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGD 647
AT S D++E+Q FL+ ++ + EGLI+KT+ DATYEPSKRSLNWLKLKKDY+E GD
Sbjct: 465 ATAKVSRDVEELQVFLEDSIKENTEGLIVKTL--DATYEPSKRSLNWLKLKKDYMEGCGD 522
Query: 648 SLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSK 707
SLDLVPI AFHGRGKRTGVYGA+LLACYD +EE QSICKIGTGFS+ LE S+SL+
Sbjct: 523 SLDLVPIGAFHGRGKRTGVYGAYLLACYDEESEELQSICKIGTGFSDEALESLSNSLKDT 582
Query: 708 VIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
VI PR YY++ ++++PDVWF ++ E + SI
Sbjct: 583 VIDAPRGYYKYGESVAPDVWFAASQVWEVKAADLSI 618
>gi|412992688|emb|CCO18668.1| predicted protein [Bathycoccus prasinos]
Length = 850
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 308/559 (55%), Positives = 394/559 (70%), Gaps = 16/559 (2%)
Query: 182 VACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETT-PEDLVPVVYLAAN 240
++ W++ PF ++ F+ I+ T R+ IT+++ N R+++ DL+ VYLA+N
Sbjct: 225 ISSWKENTATPFGIVADTFESIAETTKRLEITNLLTNTFRSIIRGGLSGDLLAAVYLASN 284
Query: 241 KIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
IAP H+G++LGIGDA++IK LAEA GR E+++K Y+E GDLG VA ASRS+Q M +P
Sbjct: 285 TIAPQHDGIDLGIGDATLIKCLAEATGRKEANIKADYREAGDLGSVAMASRSTQRTMFQP 344
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
PLT+ V FR+IA AG +S ++KK RIK LLVAA E Y++R LQ KLRIGLA+
Sbjct: 345 APLTVKGVLQEFRVIATTAGTNSVDQKKGRIKKLLVAAKGSEAGYIVRALQGKLRIGLAQ 404
Query: 361 QTLLAALGQAAVYNEQHS---KPPPN-IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
QT+ AAL A V + K N + L +A +VK VFS P Y+ +VPALL G
Sbjct: 405 QTVNAALTHAIVLEANKTAGIKLGANALADQLLKAVDVVKLVFSECPSYDLVVPALLDVG 464
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ L C F PG P+ PMLAKPT GV+E++N+F D+EFTCEYKYDGERAQ+H LEDGS+
Sbjct: 465 IDGLQEKCQFKPGAPVKPMLAKPTTGVAEVLNRFSDVEFTCEYKYDGERAQVHLLEDGSI 524
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKK------PSVRSFVLDCEIVAYDREKQKILPFQTL 530
+I+SRN E NT KFPD+V S+ K + S V+DCE VAYDRE+ KILPFQ L
Sbjct: 525 KIFSRNQEDNTPKFPDIV---SKFKNYLNNVDGKITSVVIDCEAVAYDREQDKILPFQIL 581
Query: 531 STRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
STR +KN+ + D+KV V +YAFD LY NG+ LL+E + VRR LY SF E G F FAT
Sbjct: 582 STRGKKNIKIEDVKVQVALYAFDCLYLNGKSLLREPMSVRRLALYSSFRETKGEFLFATA 641
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLD 650
TS D++E+Q FLD ++ A+ EGLI+KTMD ATYEPSKRSLNWLKLKKDY+E GDSLD
Sbjct: 642 KTSRDVEELQVFLDESIAANTEGLIVKTMD--ATYEPSKRSLNWLKLKKDYMEGCGDSLD 699
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP 710
LVPI A+HGRGKRTGVYGAFLLACYD + EEFQ+ICKIGTGFSE LE S +L +I
Sbjct: 700 LVPIGAWHGRGKRTGVYGAFLLACYDEDGEEFQTICKIGTGFSEIDLETLSKALEPHLIE 759
Query: 711 KPRPYYRFADTISPDVWFE 729
PR YY++ + + PD+WF+
Sbjct: 760 APRSYYKYPEGMEPDLWFD 778
>gi|440803704|gb|ELR24587.1| ligase I, DNA, ATPdependent, putative [Acanthamoeba castellanii
str. Neff]
Length = 753
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 297/611 (48%), Positives = 420/611 (68%), Gaps = 6/611 (0%)
Query: 127 IDNPIDSEKES---QPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVA 183
+D+ D ++E QPT + + + K K E+ ++ L + ++DP A
Sbjct: 67 VDSDFDEKEEGVEEQPTIKTTIAKAAATKGKTVKGKSKEVTKGMLALLSSSVDYDPVASA 126
Query: 184 CWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIA 243
W+KGE+VP+++L+ F I T R I ++ NM R+V+E +P DL+ VYL NKIA
Sbjct: 127 IWKKGEKVPYLWLARTFVEIEQYTARTEIIRLLTNMFRSVVELSPNDLLACVYLTINKIA 186
Query: 244 PAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPL 303
P++EGLELG+G++ +IKA+A A G+ +S +K +Y+++GDLGLVA A+R++Q M P PL
Sbjct: 187 PSYEGLELGVGESILIKAVASATGKKDSVIKAEYEKLGDLGLVAAAARNTQKTMFPPPPL 246
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
T++ VF+T IAK AG+ SQ+KKK I+ LLV A + E Q+LIR L+ KLRIGLAE+T+
Sbjct: 247 TVSFVFNTLNQIAKAAGRASQDKKKGLIQQLLVGAREGEAQWLIRSLEGKLRIGLAEKTV 306
Query: 364 LAALGQAAVYNE---QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL 420
AL A V Q + ++ + AA+ +K+VF+ LP Y ++P +L +
Sbjct: 307 QVALAHAIVLTRTDLQDKRARLGLEERMRVAAETLKEVFNELPNYNILIPVILKEEPEKW 366
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
S +C TPGIP+ PMLA PTKG+ E++ + D FTCE+KYDGERAQ+H+ +DG V +YS
Sbjct: 367 SESCHLTPGIPVHPMLAHPTKGIDEVLQRCADAAFTCEWKYDGERAQVHFTDDGGVHVYS 426
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
RN E NT K+PD+ + + KP SF+LDCE+VAYDREK++ILPFQ LSTRARK+ +
Sbjct: 427 RNLEDNTTKYPDIKQNLPKAMKPDTHSFILDCEVVAYDREKKQILPFQVLSTRARKDADM 486
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
S+IKV +C++ FD+LY NGQ L++E R RRE L+++F E F+FA + DEI
Sbjct: 487 SEIKVQICLFGFDLLYFNGQSLVREPFRKRRELLHNAFVEVDDEFKFARYSDANTTDEIA 546
Query: 601 KFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
L +V +CEGL+IK +D DATY+PSKRS +WLK+KKDY+ + DS+DLVPI A++G+
Sbjct: 547 NSLHESVAGNCEGLMIKRLDEDATYQPSKRSYSWLKVKKDYLTGMTDSVDLVPIGAYYGK 606
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD 720
GKRTGVYGAFLLACYD N EEFQ++CKIGTGFS+ LE+ + + K+I KPRPYYR++D
Sbjct: 607 GKRTGVYGAFLLACYDPNAEEFQNVCKIGTGFSDEDLEKFAEFFKDKIISKPRPYYRYSD 666
Query: 721 TISPDVWFEPT 731
+ PDVWF+ +
Sbjct: 667 QVEPDVWFDAS 677
>gi|255073103|ref|XP_002500226.1| predicted protein [Micromonas sp. RCC299]
gi|226515488|gb|ACO61484.1| predicted protein [Micromonas sp. RCC299]
Length = 676
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 318/570 (55%), Positives = 403/570 (70%), Gaps = 10/570 (1%)
Query: 182 VACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANK 241
V W+KGE VP++FL+ VF+ IS T R+ I +++ N RTV+ + P+DL+ VYLA+N
Sbjct: 47 VDGWKKGEPVPYLFLANVFENISETTKRLEIAEMLTNAFRTVIVSNPDDLLAAVYLASNT 106
Query: 242 IAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD 301
IAP HEG++LGIGDA+++K LAEA GR ES ++ Y+E GDLG+VA SRS+Q M P
Sbjct: 107 IAPQHEGIDLGIGDATLVKILAEATGRKESAIRADYKEQGDLGIVASMSRSTQKTMFAPP 166
Query: 302 PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQ 361
LT++ V FR IA G S + KK +IK LLVAA +CE Y++R LQ KLRIGLA+Q
Sbjct: 167 KLTMSGVLKEFRAIATTEGTKSVDAKKAKIKKLLVAARECEAGYIVRSLQGKLRIGLAQQ 226
Query: 362 TLLAALGQAAVYNEQHSKPPPN------IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTD 415
T+ AL A V + + L A ++KQVFS P Y++IVPALL +
Sbjct: 227 TVNQALIHAVVLQSDAAAKAAKEGGNGAVADLLGRGADVLKQVFSECPSYDEIVPALLME 286
Query: 416 G-VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
G V L + C F PG+P+ PMLAKPT GVSE++ +F D+EFTCEYKYDGERAQIH LEDG
Sbjct: 287 GGVDKLHSRCHFRPGVPVKPMLAKPTCGVSEVLQRFSDVEFTCEYKYDGERAQIHLLEDG 346
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
+V+I+SRN E NT KFPDV+ A+ K V+S V+D E VAYDRE+ KILPFQ LSTR
Sbjct: 347 TVKIFSRNQEDNTPKFPDVIRALPSYLKAGVKSVVIDGEAVAYDREQHKILPFQILSTRG 406
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI 594
RKN+ +DIKV+VCIYAFD LY NG+ LLQ+ L RRE +Y +F+E P F F T S
Sbjct: 407 RKNIDEADIKVNVCIYAFDCLYLNGETLLQKSLTERREAMYSAFKEVPDEFYFCTAKISR 466
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPI 654
D++E+Q FL+ ++ + EGLI+KTM DATYEPSKRSLNWLKLKKDY+E GDSLDLVPI
Sbjct: 467 DVEELQVFLEDSIADNTEGLIVKTM--DATYEPSKRSLNWLKLKKDYLEGCGDSLDLVPI 524
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRP 714
AFHGRGKRTGVYGA+LLACYD +EE QSICKIGTGFS+ L E + LR VI PR
Sbjct: 525 GAFHGRGKRTGVYGAYLLACYDEESEELQSICKIGTGFSDEQLVELTEGLRPTVIEAPRS 584
Query: 715 YYRF-ADTISPDVWFEPTERPETSNSPASI 743
Y+++ A+ + DVWF+P++ E + SI
Sbjct: 585 YFKYDANAMKCDVWFDPSQVWEVKAADLSI 614
>gi|293333963|ref|NP_001169987.1| uncharacterized protein LOC100383890 [Zea mays]
gi|224032747|gb|ACN35449.1| unknown [Zea mays]
Length = 452
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 286/390 (73%), Positives = 339/390 (86%), Gaps = 1/390 (0%)
Query: 354 LRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL 413
+RIGLAE+T+ ALGQAAVY +++ PP +QSP EEAAKI+KQ +SVLP+Y+KIVPA+L
Sbjct: 1 MRIGLAEKTVQMALGQAAVYADKNPLPP-KVQSPFEEAAKIIKQAYSVLPIYDKIVPAIL 59
Query: 414 TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
GVW L TC F+ G+P+GPMLAK TK VSEI++KFQ +E+TCEYKYDGERAQIH +ED
Sbjct: 60 EVGVWKLPETCKFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIHCMED 119
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
GSVEIYSRNAERNTGK+PDVV AVSR +K +V+SFVLDCEIVAYDREKQKILPFQ LSTR
Sbjct: 120 GSVEIYSRNAERNTGKYPDVVDAVSRFRKATVKSFVLDCEIVAYDREKQKILPFQILSTR 179
Query: 534 ARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
ARK V+++DIKV VC + FDILY NG+PLLQEQL++RREHLY+SFEE PG F+ AT +TS
Sbjct: 180 ARKGVTINDIKVSVCTFGFDILYINGKPLLQEQLKIRREHLYNSFEEVPGVFKLATAITS 239
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
DL+EIQKFLD AV++SCEGLIIKT+D+DATYEP+KRS NWLKLKKDY++SIGDSLDLVP
Sbjct: 240 NDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSIGDSLDLVP 299
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR 713
IAAF+GRGKRTGV+G+FLLACYD NEE+Q+IC IGTGFSE LEERS+SLRSKVI KP+
Sbjct: 300 IAAFYGRGKRTGVFGSFLLACYDEQNEEYQTICNIGTGFSEQQLEERSASLRSKVIEKPK 359
Query: 714 PYYRFADTISPDVWFEPTERPETSNSPASI 743
YYRF DT++PDVWFEP+E E + SI
Sbjct: 360 AYYRFGDTMNPDVWFEPSEVWEVKAADLSI 389
>gi|340368751|ref|XP_003382914.1| PREDICTED: DNA ligase 1-like [Amphimedon queenslandica]
Length = 780
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 321/715 (44%), Positives = 449/715 (62%), Gaps = 54/715 (7%)
Query: 73 PSPQPNSSSSSSSPKKRRTLDTQTPKTT---NSVVGEKIQEVAEEPSNDLVKPISNQIDN 129
P ++SS + +P KR T T + T +++ +K + E+P ++KP S Q D+
Sbjct: 10 PVKTNSTSSVTKTPPKRATARKHTGRVTAAAKTIIKKK--DTQEDP---VIKPKS-QADD 63
Query: 130 PID---------SEKESQPTPPSPKKRKVNV-------NSVSAKEKIAELKSNIVLLKKK 173
D +++ES P K K + NSVSA EK K +
Sbjct: 64 VKDVVVSEETKEAKEESCPVSECEKIEKSSSLAEDKENNSVSAGEK----KESFAKKTST 119
Query: 174 AGEFDPKMV-------ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMET 226
+ FDP + ACW K ++VP++ ++ F I +GR+ I I+ N LR+V+
Sbjct: 120 SSSFDPTKINYHPVKDACWTKNQKVPYLAIAKTFQQIEQISGRLKIISILTNFLRSVIAL 179
Query: 227 TPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLV 286
+P + +YL NK+ PA++GLELGIGD +IKAL+ A GR +K + E GDLGL+
Sbjct: 180 SPRETTQCIYLCLNKLGPAYKGLELGIGDNILIKALSSATGRNPQQIKAEVAEKGDLGLI 239
Query: 287 AKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYL 346
A+ASRS+Q M P PLTI+ VF+ F IAK G SQ KK + IK+L+V+ DCE +YL
Sbjct: 240 AEASRSTQRTMFAPPPLTISSVFNKFTEIAKLTGHSSQNKKVDIIKSLIVSCKDCEAKYL 299
Query: 347 IRLLQSKLRIGLAEQTLLAALGQAAVY--------NEQHSKPPPNIQSPLEEAAKIVKQV 398
R L KLRIGLAEQ++L AL A Y + + L+ AA IVK
Sbjct: 300 TRSLSGKLRIGLAEQSVLVALAHAVKYTPPGQDIADASQGVNGEKFRKELDAAAAIVKNA 359
Query: 399 FSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
+ LP Y+ ++PALL G+ L N CS TPGIP+ PMLA PTKG+ E++ +F+ EFTCE
Sbjct: 360 YCELPNYDILIPALLEHGLDELPNHCSLTPGIPLKPMLAHPTKGIQEVLRRFEQSEFTCE 419
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPS----------VRSF 508
+KYDGERAQIH L+D +V+IYSRN E NT K+PD++ + ++ K + V+S
Sbjct: 420 WKYDGERAQIHLLDDNTVQIYSRNQEDNTSKYPDIIARIPQVLKTAGEGEEGEREGVKSC 479
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
V+D E VA+D EK++ILPFQTLSTR RK+ ++S+IKV VC++AFD+L+ NG+PL++E R
Sbjct: 480 VIDAEAVAWDIEKKQILPFQTLSTRKRKDANISEIKVQVCVFAFDLLFLNGRPLVREPFR 539
Query: 569 VRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPS 628
VRRE L SF+E G F F ++ S ++++IQ F+D ++ +CEGL++K +D+DA+YE +
Sbjct: 540 VRRELLKSSFKEIEGEFMFVQSIDSTNIEDIQSFMDESMKGNCEGLMVKCLDKDASYEIA 599
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
KRS NWLKLKKDY+E +GD+LDLV + FHG GKRTG YG FLLACYD NEE+Q ICKI
Sbjct: 600 KRSRNWLKLKKDYLEGVGDTLDLVVVGGFHGTGKRTGKYGGFLLACYDEENEEYQVICKI 659
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
GTGF + LE+ +S L+ VI P+ YY +D+I+PD WFEP + E + S+
Sbjct: 660 GTGFKDEELEQHTSYLKDHVIDGPKSYYSTSDSITPDHWFEPVQVWEVKAADLSV 714
>gi|384245430|gb|EIE18924.1| ATP-dependent DNA ligase [Coccomyxa subellipsoidea C-169]
Length = 651
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/558 (51%), Positives = 392/558 (70%), Gaps = 7/558 (1%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
FD +A W+ GE VPF+FL+ F+ I+N+ R+ +T ++ RT++ TTPEDL+P VY
Sbjct: 18 FDSAELATWKAGEPVPFLFLASTFEAIANQPKRLQMTQLLVTAFRTILATTPEDLLPAVY 77
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L +N++AP+HEGLELGIGD+ ++KAL +A G++ +K Y E GDLG VA A+R+ Q
Sbjct: 78 LCSNQVAPSHEGLELGIGDSILMKALCQATGKSMQKIKDDYAEAGDLGNVAAAARAKQKT 137
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M KP PLT+ VF F+ IA+ G SQE+K + I LLV++TD EP +++R LQ KLRI
Sbjct: 138 MFKPKPLTVQGVFKAFQAIARTQGTKSQERKVDLINKLLVSSTDVEPGFIMRALQGKLRI 197
Query: 357 GLAEQTLLAALGQA-AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTD 415
GL ++T+ AL A +++ + + LE A + VKQ +S P Y+ ++PALL
Sbjct: 198 GLGDETVRVALAHAQSLHRHGADNADGKLANRLETAVQAVKQAYSQCPSYDALIPALLQY 257
Query: 416 GVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS 475
+ +L + FTPG+P+ PMLAK T G++E++ KF D EFTCEYKYDGERAQ+HY EDG
Sbjct: 258 PIEDLPDHVRFTPGVPVKPMLAKATTGIAEVLEKFTDQEFTCEYKYDGERAQVHYTEDGK 317
Query: 476 VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
V IYSRN+E NTGK+PD+ V + + V+S VLDCE VA++R KILPFQ LSTR R
Sbjct: 318 VFIYSRNSENNTGKYPDIAAIVPSMVREGVKSMVLDCEAVAFERATGKILPFQVLSTRKR 377
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT----TL 591
K+V ++DIKV VC++AFD LY NG LLQ+ L RR L + E+PG QFA +
Sbjct: 378 KDVEVADIKVQVCLFAFDCLYLNGAMLLQKPLTERRTALSQAVREKPGELQFALFKAHSY 437
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
TS D++E+ FL+ +V A EGLI+KTM D+TYEPS+RSL+WLKLKKDY+E +GD+LD+
Sbjct: 438 TSTDVEELGTFLNESVAAGTEGLIVKTM--DSTYEPSRRSLHWLKLKKDYLEGVGDTLDV 495
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
I A+ G+GKR+GV+GAFLLA Y+ EEFQ+I KIGTGFSE L++ S LR IP
Sbjct: 496 AVIGAWFGKGKRSGVFGAFLLAVYNPEGEEFQTISKIGTGFSEEQLKQFSEELRLHTIPT 555
Query: 712 PRPYYRFADTISPDVWFE 729
+PYYR+++T+ PD+WF+
Sbjct: 556 AKPYYRYSETLLPDIWFD 573
>gi|327279789|ref|XP_003224638.1| PREDICTED: DNA ligase 1-like [Anolis carolinensis]
Length = 913
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 290/565 (51%), Positives = 386/565 (68%), Gaps = 12/565 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW G+RVP++ ++ F+ I E+ R+ I + + N R+V+ +PEDL+P VY
Sbjct: 269 YHPIHDACWGSGQRVPYLAVARTFEWIEQESARLKIIETLSNFFRSVIALSPEDLLPCVY 328
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++ PA+EGLELGIG ++KALA+A GR +K + E GDLGLVA++SR++Q
Sbjct: 329 LCLNRLGPAYEGLELGIGKTILMKALAQATGRQLDQIKAEAAEKGDLGLVAESSRTTQGT 388
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P L VF + I + G S KK + IK+L VA E +Y+ R L+ KLRI
Sbjct: 389 MFAPPKLGAGAVFGKLQAIGRMMGSSSMNKKIDIIKSLFVACRHSEARYIARSLEGKLRI 448
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++L+AL QAA K PP I +S L+E A IVKQ F LP
Sbjct: 449 GLAEQSVLSALAQAASLTPPGQKFPPEILDASKGKSAETRKSWLDERALIVKQAFCELPN 508
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y+ IVP LL GV +L C TPGIP+ PMLA PTKG+ E++ +F++ FTCEYKYDGE
Sbjct: 509 YDIIVPVLLEHGVESLPKHCKITPGIPLKPMLAHPTKGIGEVLKRFEEAAFTCEYKYDGE 568
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE+G V IYSRN E NT K+PD+V + ++KK +V S +LD E VA+D + ++I
Sbjct: 569 RAQIHILENGEVHIYSRNQENNTTKYPDIVSRIPKVKKSTVESCILDAEAVAWDPDSKQI 628
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK+V DI+V VC+YAFD+LY NGQ L++E L RR L DSF E G
Sbjct: 629 QPFQVLTTRKRKDVDTEDIRVQVCVYAFDMLYLNGQSLVREPLTQRRTLLRDSFTEVEGQ 688
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT++ + + DEI +FL+ ++ SCEGL++KT++ DATYE +KRS NWLKLKKDY++
Sbjct: 689 FLFATSMDTSNTDEIAEFLERSIKDSCEGLMVKTLEVDATYEIAKRSHNWLKLKKDYLDG 748
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ G+GKR G+YG FLLACYD +EEFQSICKIGTGF++ LE+ +SL
Sbjct: 749 VGDTLDLVVIGAYLGKGKRAGIYGGFLLACYDDESEEFQSICKIGTGFTDEDLEKLHTSL 808
Query: 705 RSKVIPKPRPYYRFADTISPDVWFE 729
++ VIP+PRPYYR+ T PD W E
Sbjct: 809 KAHVIPQPRPYYRWGGTAEPDHWLE 833
>gi|390361383|ref|XP_001180844.2| PREDICTED: DNA ligase 1-like [Strongylocentrotus purpuratus]
Length = 942
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 291/606 (48%), Positives = 399/606 (65%), Gaps = 9/606 (1%)
Query: 147 RKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNE 206
+K N + +K +++K++ + + + P ACW+K E VP++ L+ F +I
Sbjct: 269 KKTNAFVWGSSDKKSDVKTSGTSFRPGSSSYHPVEGACWKKDENVPYMALADTFSIIEET 328
Query: 207 TGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEAC 266
+GR+ +I+ + L +VM TP DL +YL NK+APA+EGLELGIGD ++KA+A+A
Sbjct: 329 SGRLKTIEILSDFLTSVMLLTPGDLKMCIYLCLNKLAPAYEGLELGIGDTVLMKAIAQAT 388
Query: 267 GRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEK 326
GR+ +K E GDLGLVA++SRS+Q M P LTI KVF + IA +G K
Sbjct: 389 GRSVDKLKVDAAEKGDLGLVAESSRSTQRTMFTPPRLTIKKVFSKLKDIANLSGNSCMSK 448
Query: 327 KKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHS-------- 378
K + IK LLVA + E +YLIR L KLRIGLAEQ++L ALG A + S
Sbjct: 449 KVDLIKGLLVACKNSEARYLIRSLGGKLRIGLAEQSVLVALGHAGALAKPESDEMILKSK 508
Query: 379 -KPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
+++ ++EAA +VK + +P Y+ ++PALL+ GV L N C TP IP+ PMLA
Sbjct: 509 AHTSDSVKKAMDEAALLVKTAYCEMPTYDALIPALLSHGVTELPNHCRLTPSIPLKPMLA 568
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
PTKGVSE++N+FQD FTCEYKYDGERAQIH LE G + IYSRN E NT K+PD++ +
Sbjct: 569 HPTKGVSEVLNRFQDTPFTCEYKYDGERAQIHLLESGKINIYSRNQENNTSKYPDIIARL 628
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYR 557
S V S +LD E VA+D E+++ILPFQ LSTR RK+ DIKV VC++AFD+LY
Sbjct: 629 SSSVDEKVTSCILDAEAVAWDVERKQILPFQVLSTRKRKDADAGDIKVQVCVFAFDLLYL 688
Query: 558 NGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIK 617
NG+ L+++ LR RR L F+E G F FA ++ S D+D+I FL+ +V +CEGL++K
Sbjct: 689 NGESLVRKPLRERRSLLRAHFKEVEGEFIFAKSMISSDVDDIAVFLEESVKGNCEGLMVK 748
Query: 618 TMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDS 677
T+D+DATYE ++RS NWLKLKKDY++ +GD+LD+V + F GRGKR G YG FLLACYD
Sbjct: 749 TLDKDATYEIARRSHNWLKLKKDYLDGVGDTLDVVVLGGFQGRGKRVGSYGGFLLACYDE 808
Query: 678 NNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETS 737
NEEFQSICKIGTGF E LE+ + + +I KPRPYY + +++PD WF+ + E
Sbjct: 809 ENEEFQSICKIGTGFKEEELEKHTKFFKDHLIEKPRPYYNYDSSVAPDHWFDAVQVWEIK 868
Query: 738 NSPASI 743
+ S+
Sbjct: 869 AADLSV 874
>gi|158299989|ref|XP_319999.3| AGAP009222-PA [Anopheles gambiae str. PEST]
gi|157013784|gb|EAA15024.3| AGAP009222-PA [Anopheles gambiae str. PEST]
Length = 752
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 282/566 (49%), Positives = 384/566 (67%), Gaps = 10/566 (1%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P A W++G+RVP++ L+ F MI +GR+ + +I+ N R+V+ +P DL+ VY
Sbjct: 108 YHPLKDAFWKQGDRVPYLALARTFQMIEETSGRLRMIEILSNYFRSVILLSPRDLLASVY 167
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++APA+EG+ELGI + S++KA+A++ GR+ + +K Q GDLGLVA+ S+SSQ +
Sbjct: 168 LCLNQLAPAYEGVELGIAEFSLMKAIAQSTGRSLAQIKADAQTTGDLGLVAEQSKSSQHL 227
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M +P PL++ VF R IA G S KK ++I+++ VA E +Y+IR L KLRI
Sbjct: 228 MFRPAPLSVEVVFGKLREIASMTGSASMAKKMDKIQSMFVACRHSESRYIIRSLAGKLRI 287
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPP----------PNIQSPLEEAAKIVKQVFSVLPVYE 406
G+AEQ+LL AL QA H+ PP +++ ++E A +K V+ P Y
Sbjct: 288 GVAEQSLLQALAQACALTPPHADPPVVNALAGESEARVKARVDEVALALKTVYCQCPNYN 347
Query: 407 KIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
+IVP LL GV LS C PG P+ PMLA PTKGV E++ +F ++FTCE+KYDGERA
Sbjct: 348 RIVPVLLEHGVQRLSEHCPMEPGTPLKPMLAHPTKGVQEVLQRFDGIDFTCEWKYDGERA 407
Query: 467 QIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP 526
QIH L DGSV+I+SRN E NT K+PDV+ + + V S +LDCE VA+D +K++ILP
Sbjct: 408 QIHLLADGSVQIFSRNQENNTSKYPDVIARLEFTRTEPVASAILDCEAVAWDTDKRQILP 467
Query: 527 FQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
FQ LSTR RK+ + +DIKV VC++ FD+LY NG+PL++ RRE LY F E G +Q
Sbjct: 468 FQVLSTRKRKDANEADIKVQVCVFMFDLLYLNGEPLVERPFVERRELLYRHFREIEGQWQ 527
Query: 587 FATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIG 646
+AT L + DLDE+Q+FLD AV +CEGL++KT+ R+ATYE +KRS NWLKLKKDY+ +G
Sbjct: 528 YATRLDTGDLDELQRFLDEAVRGNCEGLMVKTLAREATYEIAKRSRNWLKLKKDYLTGVG 587
Query: 647 DSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRS 706
DSLDLV I + GRGKRTG YG FLLACYD NEE+Q+ICKIGTGFS+ L+ + RS
Sbjct: 588 DSLDLVVIGGYRGRGKRTGTYGGFLLACYDEENEEYQTICKIGTGFSDDDLQRHTEFFRS 647
Query: 707 KVIPKPRPYYRFADTISPDVWFEPTE 732
VI +PYYR + PD WFEP +
Sbjct: 648 HVIAAAKPYYRHEANVVPDDWFEPVQ 673
>gi|302847056|ref|XP_002955063.1| ATP-dependent DNA ligase [Volvox carteri f. nagariensis]
gi|300259591|gb|EFJ43817.1| ATP-dependent DNA ligase [Volvox carteri f. nagariensis]
Length = 648
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/583 (50%), Positives = 395/583 (67%), Gaps = 4/583 (0%)
Query: 163 LKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRT 222
+ + V K E D + W+KG VP+ L+ F+ I+ + R+ I + R
Sbjct: 4 VGTGAVAAATKYAEADITKLITWKKGTPVPYSLLANTFEAIAGTSKRLEIVAHLVAAFRA 63
Query: 223 VMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGD 282
V++T P DL+P VYL N++AP+H G+ELGIG+A++IKAL EA G+ E+ +KK Y+ GD
Sbjct: 64 VLDTNPPDLLPAVYLCVNRVAPSHTGIELGIGEATLIKALCEATGKNEAGIKKAYEASGD 123
Query: 283 LGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE 342
LG+VA +RS+Q M P PLTI V FR IA+ AG S + K+ I +LVAA E
Sbjct: 124 LGVVAVGARSTQRTMFTPPPLTIANVLKGFRDIAQVAGSKSVDIKRGMIVKMLVAAKGNE 183
Query: 343 PQYLIRLLQSKLRIGLAEQTLLAALGQAA-VYNEQHSKPPPNIQSPLEEAAKIVKQVFSV 401
P Y+IR LQ+KLRIGLAEQ++L AL A ++ E + LE AA++VKQ +S
Sbjct: 184 PGYIIRSLQAKLRIGLAEQSVLVALAHAVHLHREGVKDKDGRLAEKLEAAAQVVKQAYSE 243
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
P Y+ ++PALL G +L + C F PG+P+ PMLAKPT GV E++ KF D EFT EYKY
Sbjct: 244 CPSYDVLIPALLEQGTADLLSRCHFMPGVPVKPMLAKPTTGVGEVLEKFTDTEFTVEYKY 303
Query: 462 DGERAQIHYLEDG-SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDRE 520
DGERAQ+H +E G +V I+SRNAE NT K+PD+V + L KP V+S V D E VAYD E
Sbjct: 304 DGERAQVHVMEGGKTVHIFSRNAENNTPKYPDIVARLRGLLKPHVQSIVFDSEAVAYDPE 363
Query: 521 KQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEE 580
K+KILPFQ LSTRARK+VS+ +IKV V ++AFD LY NG+ LL + L RRE LY + E
Sbjct: 364 KKKILPFQVLSTRARKDVSVGEIKVQVVLFAFDCLYLNGESLLHKPLTERREALYGALME 423
Query: 581 EPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKD 640
+ G QFAT TS D++E++ FL +V+A EGLI+KT+ TYEPSKRS +WLKLKKD
Sbjct: 424 KEGQLQFATAKTSRDVEELESFLTESVEAGTEGLIVKTLAD--TYEPSKRSSHWLKLKKD 481
Query: 641 YIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEER 700
Y+E +GD+ D+VP+ AF+G+GKRTG +GA+LL YD + E +Q+I K+GTGFSE L++
Sbjct: 482 YMEGVGDTFDVVPLGAFYGKGKRTGFFGAYLLGVYDPDTETYQTISKLGTGFSEEQLQQL 541
Query: 701 SSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ S+R +IP+PRPYY+++D + PDVWF+ E + SI
Sbjct: 542 ADSMRPHIIPQPRPYYKWSDALVPDVWFDAVAVWEVKAADLSI 584
>gi|383852354|ref|XP_003701693.1| PREDICTED: DNA ligase 1-like [Megachile rotundata]
Length = 831
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 292/670 (43%), Positives = 428/670 (63%), Gaps = 20/670 (2%)
Query: 75 PQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDNPIDSE 134
P N SS +KR++ D + K++++ EK + E N+ + D++
Sbjct: 92 PDSNKEEKSSDNEKRKSSDNEKQKSSDT---EKEKSDEETEVNEQSTEEKKNGEEENDTK 148
Query: 135 KESQPTPP--SPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVP 192
++ + K+++ N+V K K A N + + P ACW+K E+VP
Sbjct: 149 APAKKIHSFFTVKQKESTKNNVGDKAKSANQSYNPSI-----SNYHPINDACWKKDEKVP 203
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
+I L+ ++I + R+ I +I+ N R+V+ P+DL+P VYL N++ PA+EG+ELG
Sbjct: 204 YIALTRTLELIEETSARLKIIEILSNYFRSVIVLRPDDLLPSVYLCLNQLGPAYEGIELG 263
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTF 312
+ D +++KA+A+ GRT + +K QE+GDLG+VA+ SRS+Q M +P PLT+ V+
Sbjct: 264 VADTTLMKAIAQCTGRTLAQIKADVQEVGDLGIVAEGSRSNQRTMFQPAPLTVPNVYSRL 323
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
R IA+ G S KK ++I+AL VA E +YLIR L KLRIGLAEQ++L AL A
Sbjct: 324 REIAQMTGSASMSKKLDKIQALFVACRLTEARYLIRSLAGKLRIGLAEQSVLQALALACA 383
Query: 373 YNEQHSKP----------PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
P + + E+ A I+K + P Y+KI+P LL +GV L +
Sbjct: 384 MTPPEQDPQILDASKKMSSDSFKQKYEKIALILKTTYCECPNYDKIIPVLLKEGVEALPS 443
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
C TPGIP+ PMLA PTKGV E++ +F+ ++FTCE+KYDGERAQIH+ E+G + IYSRN
Sbjct: 444 KCKITPGIPMKPMLAHPTKGVQEVLTRFEGLKFTCEWKYDGERAQIHFAENGDISIYSRN 503
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
E NT K+PD++ K SV+S +LDCE VA+D E + ILPFQ LSTR RK+ + +D
Sbjct: 504 QENNTSKYPDIIGRFKNTKGESVKSCILDCEAVAWDNENKHILPFQVLSTRKRKDANEAD 563
Query: 543 IKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
IKV VC++ FD+LY NG+PL+Q+ RRE L ++F++ G ++FA +L + ++++Q F
Sbjct: 564 IKVQVCVFMFDLLYLNGEPLVQQPFVKRRELLKENFKDVEGEWKFANSLDTSSMEQVQDF 623
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
LD +V +CEGL++KT+++DATYE +KRS NWLKLKKDY++ +GD+LD+V I + G+GK
Sbjct: 624 LDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLKLKKDYLDGVGDTLDVVVIGGYIGKGK 683
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
RTG YG FLLACYD NEE+QSICKIGTGF+E L++ S L+ +IP + YYR+ ++
Sbjct: 684 RTGTYGGFLLACYDQENEEYQSICKIGTGFTEEDLQKHSEFLKEHIIPTNKSYYRYDSSL 743
Query: 723 SPDVWFEPTE 732
PD WFEP +
Sbjct: 744 QPDHWFEPVQ 753
>gi|340711651|ref|XP_003394386.1| PREDICTED: DNA ligase 1-like [Bombus terrestris]
Length = 925
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 270/571 (47%), Positives = 393/571 (68%), Gaps = 12/571 (2%)
Query: 174 AGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP 233
A ++DP A W++GE+VP+I L+ ++I + + R+ I +I+ N R+V+ +P+DL+P
Sbjct: 277 ASKYDPINDAFWKRGEKVPYIALTRTLELIEDTSARLKIIEILSNYFRSVIVLSPDDLLP 336
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS 293
+YL N++APA+EG+ELG+ + +++KA+A+ GRT + +K Q +GDLG+VA+ SRS+
Sbjct: 337 SIYLCLNQLAPAYEGIELGVAETNLMKAIAQCTGRTLAQIKADVQTVGDLGIVAEGSRSN 396
Query: 294 QSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSK 353
Q M +P PLT++ V+ + IA+ G S KK ++I++L VA E +YLIR L K
Sbjct: 397 QRTMFQPAPLTVSNVYTRLKEIAQMTGSASLTKKLDKIQSLFVACRFTEARYLIRSLAGK 456
Query: 354 LRIGLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSV 401
LRIGLAEQ++L AL A PP + + +E A +K +
Sbjct: 457 LRIGLAEQSVLQALALACTMTPPIQSYPPEVLDVSKKMSSDAFKQKYDETALTLKTTYCE 516
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
P Y+KI+P LL +G+ LSN C TPGIP+ PMLA PTKGV E++ +F ++FTCE+KY
Sbjct: 517 CPNYDKIIPVLLKEGIEELSNKCKITPGIPMKPMLAHPTKGVQEVLTRFDGLKFTCEWKY 576
Query: 462 DGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK 521
DGERAQIH EDG + IYSRN E NT K+PD++ + + V+S +LDCE VA+D E
Sbjct: 577 DGERAQIHLAEDGKINIYSRNQENNTSKYPDIIGRLKNTQGEEVKSCILDCEAVAWDNEN 636
Query: 522 QKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEE 581
++ILPFQ LSTR RK+ + +DIKV VC++ FD+LY NG+PL+Q+ RRE L +F+E
Sbjct: 637 KQILPFQILSTRKRKDANEADIKVQVCVFMFDLLYLNGEPLVQQPFIKRRELLKKNFKEV 696
Query: 582 PGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDY 641
G ++FAT+L + ++++Q FLD +V +CEGL++KT+++DATYE +KRS NWLKLKKDY
Sbjct: 697 IGEWKFATSLDTSTMEQVQDFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLKLKKDY 756
Query: 642 IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERS 701
+E +GD+LD+V I + G+GKRTG YG FLLACYD NEE+QS+CKIGTGFSE L++ +
Sbjct: 757 LEGVGDTLDVVVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSVCKIGTGFSEEDLQKHT 816
Query: 702 SSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
+ +IP+ + YYR+ ++ PD WFEP +
Sbjct: 817 EFFKEHIIPQTKSYYRYDSSLEPDHWFEPVQ 847
>gi|403183158|gb|EJY57894.1| AAEL017566-PA [Aedes aegypti]
Length = 905
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 278/569 (48%), Positives = 391/569 (68%), Gaps = 13/569 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P A W+KG++VP++ L+ F +I +GR+ + +I+ N R+V+ +P DL+ VY
Sbjct: 258 YHPINDAFWKKGDKVPYLALARTFQIIEETSGRLRMIEILSNYFRSVILLSPSDLLASVY 317
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++APA+EG+ELGI + +++KA+A++ GR+ + +K Q GDLGLVA+ S+SSQ M
Sbjct: 318 LSLNQLAPAYEGVELGIAEHTLMKAIAQSTGRSLAQIKTDAQNTGDLGLVAEQSKSSQRM 377
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M +P P ++ VF + IAK G S KK ++I+++ VA E +++IR L KLRI
Sbjct: 378 MFRPAPHSVEGVFGKLKEIAKMTGAASMAKKVDKIQSMFVACRHSEARFIIRSLAGKLRI 437
Query: 357 GLAEQTLLAALGQAAVY---NEQHSKPP----------PNIQSPLEEAAKIVKQVFSVLP 403
GLAEQ+LL AL QA N++ K P ++ ++E A I+K V+ P
Sbjct: 438 GLAEQSLLQALAQACAMTPPNQKDCKEPIVNALSKCSEATAKAKVDEIALILKTVYCQCP 497
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
Y +IVP LL G+ +L C PG P+ PMLA PTKGV E++ +F ++FTCE+KYDG
Sbjct: 498 NYNQIVPVLLEHGIDHLLEKCPMMPGTPLKPMLAHPTKGVQEVLERFDGIDFTCEWKYDG 557
Query: 464 ERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQK 523
ERAQIH LEDG+V IYSRN E NT K+PD++ + +K SV S +LDCE VA+D EK++
Sbjct: 558 ERAQIHLLEDGTVNIYSRNQENNTSKYPDIIARLGNTRKESVTSAILDCEAVAWDPEKKQ 617
Query: 524 ILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG 583
ILPFQ LSTR RK+ + +DIKV VC+Y FD+LY NG+PL++ RRE +Y F E G
Sbjct: 618 ILPFQILSTRKRKDANEADIKVQVCVYMFDLLYLNGKPLVERPFLERRELMYKHFIEFEG 677
Query: 584 FFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE 643
+++AT L + D+DE+Q+FLD AV +CEGL++KT+ ++ATYE +KRS NWLKLKKDY+
Sbjct: 678 EWKYATRLDTGDIDELQRFLDEAVKGNCEGLMVKTLQKEATYEIAKRSRNWLKLKKDYLS 737
Query: 644 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSS 703
+GDSLDLV I + GRGKRTG YG FLLACYD +NEE+QSICKIGTGFS+ L+ +
Sbjct: 738 GVGDSLDLVVIGGYKGRGKRTGTYGGFLLACYDEDNEEYQSICKIGTGFSDEDLQTHTDF 797
Query: 704 LRSKVIPKPRPYYRFADTISPDVWFEPTE 732
+ K+IP+ + YYR+ + PD WFEP +
Sbjct: 798 FKDKIIPRAKNYYRYDSSHEPDDWFEPAQ 826
>gi|156549819|ref|XP_001606591.1| PREDICTED: DNA ligase 1-like [Nasonia vitripennis]
Length = 1128
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 273/566 (48%), Positives = 393/566 (69%), Gaps = 12/566 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P A W++G++VP++ L+ F++I + + R+ I +I+ N R+V+ +P+DL+ +Y
Sbjct: 483 YHPINDAFWKEGQKVPYLALTRTFELIEDISARLKIIEILSNYFRSVIVLSPDDLLASIY 542
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++APA+EGLELGI + +++KA+A + GRT + +K + Q++GDLG++A+ SRS+Q M
Sbjct: 543 LCLNQLAPAYEGLELGIAETNLMKAIASSTGRTLAQIKSELQKVGDLGVIAEGSRSNQKM 602
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M +P PLT+ V+ + IA G S KK ++I++L VA E +YLIR L KLRI
Sbjct: 603 MFQPPPLTVNTVYAKLKEIASTTGTSSGMKKVDKIQSLFVACRHSEARYLIRSLAGKLRI 662
Query: 357 GLAEQTLLAALGQAA------------VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++L A+ A V N + + +E A I+K + P
Sbjct: 663 GLAEQSVLQAIALACAMTPPEQSRPFEVLNASKGISSESFKQNYDEVALILKTTYCQCPN 722
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y KI+P +L G+ L N C TPGIP+ PMLA PTKG+ E++++F+ ++FTCEYKYDGE
Sbjct: 723 YNKIIPVILKKGIKELPNECKLTPGIPLKPMLAHPTKGIQEVLSRFEGLKFTCEYKYDGE 782
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH EDG+V+IYSRN E NT K+PD++ +S + SV+S VLDCE VA+D+EK++I
Sbjct: 783 RAQIHIQEDGAVKIYSRNQEDNTSKYPDIINRISNTRHESVKSCVLDCEAVAWDKEKKQI 842
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
LPFQ LSTR RK+ + +DIKV VC++ FD+LY NG L++E L+ RRE L + F+E G
Sbjct: 843 LPFQVLSTRKRKDANEADIKVQVCVFMFDLLYFNGSALVEEPLKKRRELLKEYFKEVEGE 902
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
+ FA ++ +DE+Q+FLD ++ +CEGL+IKT++++ATYE +KRS NWLKLKKDY+E
Sbjct: 903 WCFAKSVDVQTMDEVQEFLDESIKGNCEGLMIKTLEKEATYEIAKRSRNWLKLKKDYLEG 962
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I + G+GKRTG YG FLLACYD NEE+QSICKIGTGFSE L + + +L
Sbjct: 963 VGDTLDLVVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSICKIGTGFSEDDLTKHTEAL 1022
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEP 730
+ VI + + YYR ++ PD WFEP
Sbjct: 1023 KECVIDQAKSYYRCDSSLEPDHWFEP 1048
>gi|187608350|ref|NP_001119860.1| DNA ligase 1 [Danio rerio]
Length = 1058
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 283/568 (49%), Positives = 390/568 (68%), Gaps = 12/568 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+KG++VP++ ++ F+ I ++GR+ + + N LR+V+ +P+DL+ VY
Sbjct: 415 YHPIDHACWKKGQKVPYLAVARTFEKIEEDSGRLKNIETLSNFLRSVILLSPDDLLCCVY 474
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++ PA++GLELGIG+ ++KA+A+A GR +K + QE GDLGLVA++SRS+Q M
Sbjct: 475 LCLNQLGPAYQGLELGIGETVLMKAVAQATGRQLDKIKAEAQEKGDLGLVAESSRSNQRM 534
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P LT VF+ + IA +G + KK + IK L VA E +Y++R L KLRI
Sbjct: 535 MFAPANLTAGGVFNKLKEIAHMSGNSAMNKKIDIIKGLFVACRFSEARYIVRSLAGKLRI 594
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPP------------NIQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP N + LEE A I+KQ + +P
Sbjct: 595 GLAEQSVLAALSQAVCLTPPGQEFPPAVLDAGKGMSTENRRVFLEEKALILKQTYCEMPN 654
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y+ I+P LL +G+ L N C TPG+P+ PMLA PTKGV E++ +F + FTCEYKYDGE
Sbjct: 655 YDAIIPVLLKEGIDELPNHCKLTPGVPLRPMLAHPTKGVGEVMKRFDEASFTCEYKYDGE 714
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE+G V I+SRN E NT K+PD++ + ++KK SVRS VLD E VA+DREK++I
Sbjct: 715 RAQIHILENGEVRIFSRNQEDNTSKYPDIISRIPQVKKESVRSCVLDSEAVAWDREKKQI 774
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK+V S+IKV VC+YAFD+LY NG+ L++E L RR L +SF E+ G
Sbjct: 775 QPFQVLTTRKRKDVDASEIKVQVCVYAFDLLYLNGESLVREPLSKRRALLRESFVEKEGE 834
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FA +L + + + I +FL+ +V SCEGL++KT+++ ATYE +KRS NWLKLKKDY+E
Sbjct: 835 FVFARSLDADNTETIAEFLEQSVRDSCEGLMVKTLEKHATYEIAKRSHNWLKLKKDYLEG 894
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD++DL I A+ G+GKR G YG FLLACYD NEEFQS+CKIGTGF + LE+ + L
Sbjct: 895 VGDTVDLCVIGAYLGKGKRAGGYGGFLLACYDEENEEFQSVCKIGTGFKDEDLEQHYNFL 954
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTE 732
+ ++PKPRPYYR + PDVW E +
Sbjct: 955 KEHILPKPRPYYRVDQSAEPDVWLEAVQ 982
>gi|390479226|ref|XP_002762363.2| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Callithrix
jacchus]
Length = 1009
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 315/712 (44%), Positives = 450/712 (63%), Gaps = 57/712 (8%)
Query: 74 SPQPNSSSSSSSPK--------KRRTLDTQTPK---TTNSVVGEKIQEVAEEPSNDLVKP 122
SP+ N S S +SP KRRT + +TPK T V EK +E ++P+ KP
Sbjct: 220 SPESNPSLSDTSPMDSSPSGIPKRRT-EAETPKENLTEAEVATEKEREDGDQPTVP-PKP 277
Query: 123 I-SNQIDNPIDS-------------EKESQPTPP-----------SPKKRKVNVNSVSAK 157
+ +++ + P++S ++E Q PP +P+K + V +
Sbjct: 278 LKTSEAETPMESISEPEVAMRQELQDEEEQAKPPRRAPKTLSNFFTPRKPAIK-KEVKEE 336
Query: 158 EKIAELKSNIVLLKKKAG------EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRIL 211
E A K + +G + P ACW+ G++VP++ ++ F+ I + R+
Sbjct: 337 EPGALGKEGAEGPLEPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLR 396
Query: 212 ITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES 271
+ + + N+LR+V+ +P DL+PV+YL+ N++ P +GLELG+GD ++KA+A+A GR
Sbjct: 397 MVETLSNLLRSVVALSPPDLLPVLYLSLNQLGPPQQGLELGVGDGVLLKAVAQATGRQLE 456
Query: 272 HVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRI 331
V+ + E GD+GLVA+ SRS+Q +M P PLT + VF FR IA+ G S KK + I
Sbjct: 457 SVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFTKFRDIARLTGSASTAKKIDII 516
Query: 332 KALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA------------AVYNEQHSK 379
KAL VA E +Y+ R L +LR+GLAEQ++LAAL QA AV + K
Sbjct: 517 KALFVACRHSEARYIARSLSGRLRLGLAEQSVLAALSQAMSLTPPGQEFPLAVVDAGKGK 576
Query: 380 PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKP 439
++ LEE I+KQ F +P ++IVP LL G+ L C PGIP+ PMLA P
Sbjct: 577 TAEARKTWLEEQGMILKQTFCEVPDLDRIVPVLLEHGLERLPEHCKLNPGIPLKPMLAHP 636
Query: 440 TKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSR 499
T+GVSE++ +F++ FTCEYKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ + R
Sbjct: 637 TRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALESGEVKIFSRNQEDNTGKYPDIISRIPR 696
Query: 500 LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNG 559
+K PSV SF+LD E VA+DREK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG
Sbjct: 697 IKLPSVTSFILDAEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNG 756
Query: 560 QPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM 619
+ L++E L RR+ L ++F E G F FAT+L + D+++I +FL+ +V SCEGL++KT+
Sbjct: 757 ESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTL 816
Query: 620 DRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNN 679
D DATYE +KRS NWLK+KKDY+ +GD+LDLV I A+ GRGKR G YG FLLACYD ++
Sbjct: 817 DVDATYEIAKRSHNWLKMKKDYLSGVGDTLDLVVIGAYLGRGKRAGRYGGFLLACYDEDS 876
Query: 680 EEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
EE Q+ICK+GTGFS+ LE SL++ V+P PRPY R D ++PD W +P+
Sbjct: 877 EELQAICKLGTGFSDEELEAHHQSLQALVLPSPRPYVRIDDAVTPDHWLDPS 928
>gi|301625480|ref|XP_002941929.1| PREDICTED: DNA ligase 1 [Xenopus (Silurana) tropicalis]
Length = 1040
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 283/579 (48%), Positives = 388/579 (67%), Gaps = 12/579 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW G++VP++ ++ F+ I E+ R+ + + N LR+V+ TP DL+P +Y
Sbjct: 396 YHPINDACWSNGQKVPYLAVARTFERIEEESARLKNIETLSNFLRSVIALTPGDLLPCIY 455
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++ PA+EGLELGIG+ ++KA+A+A GR +K + QE GDLGLVA++SRS+Q
Sbjct: 456 LCLNRLGPAYEGLELGIGETILMKAVAQATGRQLEKIKSEAQEKGDLGLVAESSRSNQRT 515
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P L + VF + IA+ G S KK + IK L VA E +Y+ R L KLRI
Sbjct: 516 MFTPPKLMASGVFSKLKDIARMTGNASMNKKIDIIKGLFVACRHSEARYIARSLGGKLRI 575
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++L+A+ QA PP + +S +E+ A I+KQ F LP
Sbjct: 576 GLAEQSVLSAIAQAVCLTPPGHDAPPTVMDAGKGMSTDARKSWIEDKAMILKQTFCELPN 635
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y+ I+P LL G+ +L C TPGIP+ PMLA PTKG+ E++ +F + FTCEYKYDGE
Sbjct: 636 YDAIIPILLEHGIDDLPKHCRLTPGIPLKPMLAHPTKGIGEVLKRFDEAAFTCEYKYDGE 695
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE+G V IYSRN E NT K+PD++ + ++KK SV+S +LD E VA+D EK++I
Sbjct: 696 RAQIHILENGEVHIYSRNQENNTTKYPDIISRIPKIKKESVKSCILDTEAVAWDPEKKQI 755
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK+V S+IKV VC+YAFD+LY NG+ L++E RR+ L DSF E G
Sbjct: 756 QPFQVLTTRKRKDVDASEIKVQVCVYAFDMLYLNGESLVKEPFAKRRQLLRDSFLETEGE 815
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT + + + DEI +FLD ++ SCEGL++KT+++DATYE +KRS NWLKLKKDY+E
Sbjct: 816 FMFATYMDTSNTDEISEFLDQSIKDSCEGLMVKTLEQDATYEIAKRSHNWLKLKKDYLEG 875
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ G+GKRTG+YG FLLA YD +EE+Q+ICKIGTGF++ LE+ + L
Sbjct: 876 VGDTLDLVVIGAYLGKGKRTGIYGGFLLASYDEESEEYQTICKIGTGFTDEDLEKHYNYL 935
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ VI PR YYR+ PD WF+P + E + SI
Sbjct: 936 KDHVIDSPRSYYRWDSATEPDHWFDPVQVWEVKCADLSI 974
>gi|66821251|ref|XP_644124.1| DNA ligase I [Dictyostelium discoideum AX4]
gi|74926714|sp|Q869E1.1|DNL1_DICDI RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|60472186|gb|EAL70139.1| DNA ligase I [Dictyostelium discoideum AX4]
Length = 1192
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/570 (49%), Positives = 402/570 (70%), Gaps = 13/570 (2%)
Query: 175 GEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
G++ P A W+KGE VP++ L+ F+M+ + + R++I + + N+ R++M +P+DLV
Sbjct: 546 GKYRPIEDAQWKKGEAVPYMVLAKTFEMMESTSSRLIIIEHLANLFRSIMLLSPKDLVMT 605
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
+YL+ NKI P+++ ELGIG+ +IK+LAE+ GR+ +K++ E+GDLG++A+ SRS+Q
Sbjct: 606 IYLSINKIGPSYQSKELGIGEHVLIKSLAESTGRSVDVIKQELTEVGDLGIIAQNSRSTQ 665
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
++M KP PLTI VF TF+ IA +G Q+KKK+ IK LLV+ DCE Y+IR LQ KL
Sbjct: 666 TLMGKPTPLTIQSVFKTFQQIADLSGTGGQQKKKDLIKKLLVSCKDCETLYIIRSLQGKL 725
Query: 355 RIGLAEQTLLAALGQAA------------VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVL 402
RIGLAE+++L AL ++ +++ + + + V + +S L
Sbjct: 726 RIGLAERSVLMALAKSVLVTPPIDGSGQQIFDIRKQMKQEEFEERYQNVVSKVTRAYSQL 785
Query: 403 PVYEKIVPALL-TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
P Y+ VP L+ +G+ N+ +TCS GIP+ PMLA+PT G+S+++++F DMEFTCE+KY
Sbjct: 786 PNYDLFVPHLIAVNGIDNILSTCSLKVGIPVKPMLAQPTTGISQMLDRFSDMEFTCEFKY 845
Query: 462 DGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK 521
DGERAQIH L DG+ IY+RN E T K+PD+V V++ P+V+SF+LDCE VA+D
Sbjct: 846 DGERAQIHRLPDGTTHIYTRNLEDYTQKYPDIVANVTKFVGPNVKSFILDCEAVAFDAAT 905
Query: 522 QKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEE 581
+KIL FQ LSTRARK+V LS IKV VC++AFD+LY NGQ L+ E L RREHL ++F
Sbjct: 906 KKILSFQVLSTRARKSVQLSQIKVPVCVFAFDLLYLNGQSLIDEPLIKRREHLVENFIAS 965
Query: 582 PGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDY 641
G F FA D+++IQ +L+ AV+ +CEGL++KT+ + YEPS+RS NWLK+KKDY
Sbjct: 966 DGVFAFAKYSNISDVNDIQSYLEEAVEGNCEGLMVKTLKEKSIYEPSRRSYNWLKIKKDY 1025
Query: 642 IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERS 701
++ + DSLDLVPI A++G+GKRTG YGA+LLACYD NNEEFQ++CKIGTGFS+ L +
Sbjct: 1026 MQGMTDSLDLVPIGAWYGKGKRTGTYGAYLLACYDENNEEFQTLCKIGTGFSDEQLTTFT 1085
Query: 702 SSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
S L+ +I +PR +RF+D+I PDVWF P+
Sbjct: 1086 SQLKPHLINQPRNQFRFSDSIKPDVWFSPS 1115
>gi|147901564|ref|NP_001081653.1| DNA ligase 1 [Xenopus laevis]
gi|1706480|sp|P51892.1|DNLI1_XENLA RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|1161304|gb|AAB37754.1| ligase I [Xenopus laevis]
Length = 1070
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 291/605 (48%), Positives = 400/605 (66%), Gaps = 20/605 (3%)
Query: 142 PSPKKRKVNVNSV--SAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLV 199
P PKK NV S ++K++ E ++ K K + P ACW G++VP++ ++
Sbjct: 395 PKPKK---NVGSFFGASKQEATEEQTEYNPSKSK---YHPIDDACWCNGQKVPYLAVART 448
Query: 200 FDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASII 259
F+ I E+ R+ + + N LR+V+ TPEDL+P +YL N++ PA+EGLELGIG+ ++
Sbjct: 449 FERIEEESARLKNVETLSNFLRSVIALTPEDLLPCIYLCLNRLGPAYEGLELGIGETILM 508
Query: 260 KALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEA 319
KA+A+A GR +K + QE GDLGLVA++SRS+Q M P L + VF + IA+
Sbjct: 509 KAVAQATGRQLEKIKAEAQEKGDLGLVAESSRSNQRTMFTPPKLMASGVFGKLKDIARMT 568
Query: 320 GKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK 379
G S KK + IK L VA E +Y+ R L KLRIGLAEQ++L+++ QA
Sbjct: 569 GNASMNKKIDIIKGLFVACRHSEARYIARSLGGKLRIGLAEQSVLSSIAQAVCLTPPGRD 628
Query: 380 PPPNI------------QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
PP + +S +EE A I+KQ F LP Y+ I+P LL G+ +L C T
Sbjct: 629 APPTVMDAGKGMSADARKSWIEEKAMILKQTFCELPNYDAIIPILLEHGIDDLPKHCRLT 688
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNT 487
PGIP+ PMLA PTKG+ E++ +F + FTCEYKYDGERAQIH LE+G V +YSRN E NT
Sbjct: 689 PGIPLKPMLAHPTKGIGEVLKRFDEAAFTCEYKYDGERAQIHILENGEVHVYSRNQENNT 748
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV 547
K+PD++ + ++KK SV+S +LD E VA D EK++I PFQ L+TR RK+V S+IKV V
Sbjct: 749 TKYPDIISRIPKIKKESVKSCILDTEAVAGDAEKKQIQPFQVLTTRKRKDVDASEIKVQV 808
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
C+YAFD+LY NG+ L++E RR+ L DSF E G F FAT + + DEI +FLD ++
Sbjct: 809 CVYAFDMLYLNGESLVKEPFAKRRQLLRDSFLETEGQFMFATYMDKSNTDEISEFLDQSI 868
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
SCEGL++KT+++DATYE +KRS NWLKLKKDY+E +GD+LDLV I A+ G+GKRTG+Y
Sbjct: 869 KDSCEGLMVKTLEQDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGKGKRTGIY 928
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVW 727
G FLLA YD +EE+Q+ICKIGTGF++ LE+ + L+ VI PR YYR+ PD W
Sbjct: 929 GGFLLASYDEESEEYQTICKIGTGFTDDDLEKHYNFLKDHVIENPRSYYRWDSATEPDHW 988
Query: 728 FEPTE 732
F+P +
Sbjct: 989 FDPVQ 993
>gi|403299139|ref|XP_003940347.1| PREDICTED: DNA ligase 1-like isoform 1 [Saimiri boliviensis
boliviensis]
Length = 918
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 324/769 (42%), Positives = 457/769 (59%), Gaps = 99/769 (12%)
Query: 52 KMSSSAPNAFQVLMSAAAKKKPSPQPNSSSSSSSP--------KKRRTLDTQTPKTTNSV 103
K APN QV + + SP+ N S S +SP KRRT Q PK T
Sbjct: 79 KGQKPAPNCPQV---SPPRPATSPESNPSLSDTSPMDSSPSGIPKRRTARKQLPKRT--- 132
Query: 104 VGEKIQEVAEEPSND-------------LVKPISNQIDNPIDSEKE----SQPT-PPSPK 145
I+EV EE S D P N + + +EKE QPT PP P
Sbjct: 133 ----IEEVLEEESADKDREAKRKKEEEEAETPKENLTEAEVATEKEREDGDQPTTPPKPL 188
Query: 146 K--------RKVNVNSVSAKEKIAELK------------SNIVLLKKKA----------- 174
K ++ V+ K+++ E + S+ +K A
Sbjct: 189 KTSEAETPMESISEPEVATKQELQEEEQAKPARRAPKTLSSFFTPRKPAIKKEMKEEELG 248
Query: 175 --------GEFDPKMV------------ACWEKGERVPFIFLSLVFDMISNETGRILITD 214
G DP ACW+ G++VP++ ++ F+ I + R+ + +
Sbjct: 249 APGKEGAEGPLDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVE 308
Query: 215 IVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVK 274
+ N+LR+V+ +P DL+PV+YL+ N++ P +GLELG+GD ++KA+A+A GR V+
Sbjct: 309 TLSNLLRSVVALSPPDLLPVLYLSLNQLGPPQQGLELGVGDGVLLKAVAQATGRQLESVR 368
Query: 275 KQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKAL 334
+ E GD+GLVA+ SRS+Q +M P PLT + VF FR IA+ G S KK + IKAL
Sbjct: 369 AEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFTKFRDIARLTGSASTAKKIDIIKAL 428
Query: 335 LVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI---------- 384
VA E +Y+ R L +LR+GLAEQ++LAAL QA + PP +
Sbjct: 429 FVACRHSEARYIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAE 488
Query: 385 --QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKG 442
++ LEE I+KQ F +P ++IVP LL G+ L C +PGIP+ PMLA PT+G
Sbjct: 489 ARKTWLEEQGMILKQTFCEVPDLDRIVPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRG 548
Query: 443 VSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKK 502
++E++ +F++ FTCEYKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ + R+K
Sbjct: 549 INEVLKRFEEAAFTCEYKYDGQRAQIHALESGEVKIFSRNQEDNTGKYPDIISRIPRIKL 608
Query: 503 PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPL 562
PSV SF+LD E VA+DREK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L
Sbjct: 609 PSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESL 668
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRD 622
++E L RR+ L ++F E G F FAT+L + D+++I +FL+ +V SCEGL++KT+D D
Sbjct: 669 VREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMLKTLDVD 728
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
ATYE +KRS NWLK+KKDY+ +GD+LDLV I A+ GRGKR G YG FLLACY+ ++EE
Sbjct: 729 ATYEIAKRSHNWLKMKKDYLSGVGDTLDLVVIGAYLGRGKRAGRYGGFLLACYEEDSEEL 788
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
Q+ICK+GTGFS+ LE SL++ V+P PRPY R D ++PD W +P+
Sbjct: 789 QAICKLGTGFSDDELEAHHQSLQALVLPSPRPYVRTDDAVTPDHWLDPS 837
>gi|403299143|ref|XP_003940349.1| PREDICTED: DNA ligase 1-like isoform 3 [Saimiri boliviensis
boliviensis]
Length = 887
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 324/768 (42%), Positives = 458/768 (59%), Gaps = 98/768 (12%)
Query: 52 KMSSSAPNAFQVLMSAAAKKKPSPQPNSSSSSSSPK--------KRRTLDTQTPKTTNSV 103
K APN QV + + SP+ N S S +SP KRRT Q PK T
Sbjct: 49 KGQKPAPNCPQV---SPPRPATSPESNPSLSDTSPMDSSPSGIPKRRTARKQLPKRT--- 102
Query: 104 VGEKIQEVAEEPSNDLVK------------PISNQIDNPIDSEKE----SQPT-PPSPKK 146
I+EV EE S D + P N + + +EKE QPT PP P K
Sbjct: 103 ----IEEVLEEESADKDREAKRKKEEEAETPKENLTEAEVATEKEREDGDQPTTPPKPLK 158
Query: 147 --------RKVNVNSVSAKEKIAELK------------SNIVLLKKKA------------ 174
++ V+ K+++ E + S+ +K A
Sbjct: 159 TSEAETPMESISEPEVATKQELQEEEQAKPARRAPKTLSSFFTPRKPAIKKEMKEEELGA 218
Query: 175 -------GEFDPKMV------------ACWEKGERVPFIFLSLVFDMISNETGRILITDI 215
G DP ACW+ G++VP++ ++ F+ I + R+ + +
Sbjct: 219 PGKEGAEGPLDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVET 278
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKK 275
+ N+LR+V+ +P DL+PV+YL+ N++ P +GLELG+GD ++KA+A+A GR V+
Sbjct: 279 LSNLLRSVVALSPPDLLPVLYLSLNQLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRA 338
Query: 276 QYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALL 335
+ E GD+GLVA+ SRS+Q +M P PLT + VF FR IA+ G S KK + IKAL
Sbjct: 339 EAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFTKFRDIARLTGSASTAKKIDIIKALF 398
Query: 336 VAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI----------- 384
VA E +Y+ R L +LR+GLAEQ++LAAL QA + PP +
Sbjct: 399 VACRHSEARYIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEA 458
Query: 385 -QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
++ LEE I+KQ F +P ++IVP LL G+ L C +PGIP+ PMLA PT+G+
Sbjct: 459 RKTWLEEQGMILKQTFCEVPDLDRIVPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGI 518
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKP 503
+E++ +F++ FTCEYKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ + R+K P
Sbjct: 519 NEVLKRFEEAAFTCEYKYDGQRAQIHALESGEVKIFSRNQEDNTGKYPDIISRIPRIKLP 578
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLL 563
SV SF+LD E VA+DREK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L+
Sbjct: 579 SVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLV 638
Query: 564 QEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDA 623
+E L RR+ L ++F E G F FAT+L + D+++I +FL+ +V SCEGL++KT+D DA
Sbjct: 639 REPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMLKTLDVDA 698
Query: 624 TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
TYE +KRS NWLK+KKDY+ +GD+LDLV I A+ GRGKR G YG FLLACY+ ++EE Q
Sbjct: 699 TYEIAKRSHNWLKMKKDYLSGVGDTLDLVVIGAYLGRGKRAGRYGGFLLACYEEDSEELQ 758
Query: 684 SICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
+ICK+GTGFS+ LE SL++ V+P PRPY R D ++PD W +P+
Sbjct: 759 AICKLGTGFSDDELEAHHQSLQALVLPSPRPYVRTDDAVTPDHWLDPS 806
>gi|350411865|ref|XP_003489474.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Bombus
impatiens]
Length = 945
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 269/571 (47%), Positives = 391/571 (68%), Gaps = 12/571 (2%)
Query: 174 AGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP 233
A ++DP A W++GE+VP+I L+ ++I + + R+ I +I+ N R+V+ +P+DL+P
Sbjct: 297 ASKYDPINDAFWKQGEKVPYIALTRTLELIEDTSARLKIIEILSNYFRSVIVLSPDDLLP 356
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS 293
+YL N++APA+EG+ELG+ + +++KA+A+ GRT + +K Q +GDLG+VA+ SRS+
Sbjct: 357 SIYLCLNQLAPAYEGIELGVAETNLMKAIAQCTGRTLAQIKADVQTVGDLGIVAEGSRSN 416
Query: 294 QSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSK 353
Q M +P PLT++ V+ + IA+ G S KK ++I++L VA E +YLIR L K
Sbjct: 417 QRTMFQPAPLTVSIVYTRLKEIAQMTGSASLTKKLDKIQSLFVACRFTEARYLIRSLAGK 476
Query: 354 LRIGLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSV 401
LRIGLAEQ++L AL A PP + + +E A +K +
Sbjct: 477 LRIGLAEQSVLQALALACTMTPPIQSYPPEVLDVSKKMSSDAFKQKYDETALTLKTTYCE 536
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
P Y+KI+P LL +G+ L N C TPGIP+ PMLA PTKGV E++ +F ++FTCE+KY
Sbjct: 537 CPNYDKIIPVLLKEGIEELPNKCKITPGIPMKPMLAHPTKGVQEVLTRFDGLKFTCEWKY 596
Query: 462 DGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK 521
DGERAQIH EDG + IYSRN E NT K+PD++ + V+S +LDCE VA+D E
Sbjct: 597 DGERAQIHLAEDGKISIYSRNQENNTSKYPDIIGRFKNTQGEEVKSCILDCEAVAWDNEN 656
Query: 522 QKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEE 581
++ILPFQ LSTR RK+ + +DIKV VC++ FD+LY NG+PL+Q+ RRE L +F+E
Sbjct: 657 KQILPFQILSTRKRKDANEADIKVQVCVFMFDLLYLNGEPLVQQPFIKRRELLKKNFKEV 716
Query: 582 PGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDY 641
G ++FAT+L + ++++Q FLD +V +CEGL++KT+++DATYE +KRS NWLKLKKDY
Sbjct: 717 IGEWKFATSLDTSTMEQVQDFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLKLKKDY 776
Query: 642 IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERS 701
+E +GD+LD+V I + G+GKRTG YG FLLACYD NEE+QS+CKIGTGFSE L++ +
Sbjct: 777 LEGVGDTLDVVVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSVCKIGTGFSEEDLQKHT 836
Query: 702 SSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
+ +IP+ + YYR+ ++ PD WFEP +
Sbjct: 837 EFFKEHIIPQTKSYYRYDSSLEPDHWFEPVQ 867
>gi|402906130|ref|XP_003915857.1| PREDICTED: DNA ligase 1 isoform 2 [Papio anubis]
Length = 851
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 302/697 (43%), Positives = 443/697 (63%), Gaps = 30/697 (4%)
Query: 65 MSAAAKKKPSP---QPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVK 121
+S A +KP+P Q + S++SP+ +L +P+ ++ K + AE P+ + +
Sbjct: 75 LSPAKGQKPAPDCSQVSPPRSATSPENHASLSDTSPRDSSPSGIPKRRTEAETPTESVSE 134
Query: 122 PISNQIDNPIDSEKESQPTPPSPK-------------KRKVNVNSVSA--KEKIAELKSN 166
P + E++++P +PK K++V A KE AE +
Sbjct: 135 PEVATRQELQEEEEQTKPPRSAPKTLSSFFTPRKPAIKKEVKEEEPGAPGKEGAAEGPLD 194
Query: 167 IVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMET 226
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+
Sbjct: 195 PSGYNPAKNSYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVAL 254
Query: 227 TPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLV 286
+P DL+PV+YL+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLV
Sbjct: 255 SPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLV 314
Query: 287 AKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYL 346
A+ SRS+Q +M P PLT + VF FR IA+ G S KK + IK L VA E +++
Sbjct: 315 AENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFI 374
Query: 347 IRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKI 394
R L +LR+GLAEQ++LAAL QA + PP + ++ LEE I
Sbjct: 375 ARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMI 434
Query: 395 VKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDME 454
+KQ F +P ++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++
Sbjct: 435 LKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAA 494
Query: 455 FTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEI 514
FTCEYKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E
Sbjct: 495 FTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEA 554
Query: 515 VAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHL 574
VA+DREK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L
Sbjct: 555 VAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLL 614
Query: 575 YDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNW 634
++F E G F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NW
Sbjct: 615 RENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNW 674
Query: 635 LKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
LKLKKDY++ +GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+
Sbjct: 675 LKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSD 734
Query: 695 AMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
LEE SL++ V+P PRPY R ++PD W +P+
Sbjct: 735 EELEEHHQSLKALVLPSPRPYVRIDGAVTPDHWLDPS 771
>gi|403299141|ref|XP_003940348.1| PREDICTED: DNA ligase 1-like isoform 2 [Saimiri boliviensis
boliviensis]
Length = 850
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 276/567 (48%), Positives = 393/567 (69%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 203 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 262
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 263 LSLNQLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 322
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IKAL VA E +Y+ R L +LR+
Sbjct: 323 MLPPPPLTASGVFTKFRDIARLTGSASTAKKIDIIKALFVACRHSEARYIARSLSGRLRL 382
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 383 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 442
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++IVP LL G+ L C +PGIP+ PMLA PT+G++E++ +F++ FTCEYKYDG+
Sbjct: 443 LDRIVPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGINEVLKRFEEAAFTCEYKYDGQ 502
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + R+K PSV SF+LD E VA+DREK++I
Sbjct: 503 RAQIHALESGEVKIFSRNQEDNTGKYPDIISRIPRIKLPSVTSFILDTEAVAWDREKKQI 562
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 563 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 622
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLK+KKDY+
Sbjct: 623 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMLKTLDVDATYEIAKRSHNWLKMKKDYLSG 682
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLACY+ ++EE Q+ICK+GTGFS+ LE SL
Sbjct: 683 VGDTLDLVVIGAYLGRGKRAGRYGGFLLACYEEDSEELQAICKLGTGFSDDELEAHHQSL 742
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R D ++PD W +P+
Sbjct: 743 QALVLPSPRPYVRTDDAVTPDHWLDPS 769
>gi|402906128|ref|XP_003915856.1| PREDICTED: DNA ligase 1 isoform 1 [Papio anubis]
Length = 919
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 275/567 (48%), Positives = 391/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 273 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 332
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 333 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 392
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 393 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 452
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 453 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 512
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 513 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 572
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 573 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 632
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 633 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 692
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 693 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 752
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 753 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 812
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R ++PD W +P+
Sbjct: 813 KALVLPSPRPYVRIDGAVTPDHWLDPS 839
>gi|384940622|gb|AFI33916.1| DNA ligase 1 [Macaca mulatta]
Length = 919
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 275/567 (48%), Positives = 391/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 273 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 332
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 333 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 392
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 393 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 452
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 453 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 512
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 513 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 572
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 573 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 632
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 633 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 692
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 693 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 752
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 753 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 812
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R ++PD W +P+
Sbjct: 813 KALVLPSPRPYVRIDGAVTPDHWLDPS 839
>gi|383418319|gb|AFH32373.1| DNA ligase 1 [Macaca mulatta]
Length = 919
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 275/567 (48%), Positives = 391/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 273 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 332
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 333 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 392
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 393 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 452
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 453 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 512
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 513 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 572
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 573 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 632
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 633 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 692
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 693 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 752
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 753 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 812
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R ++PD W +P+
Sbjct: 813 KALVLPSPRPYVRIDGAVTPDHWLDPS 839
>gi|402906132|ref|XP_003915858.1| PREDICTED: DNA ligase 1 isoform 3 [Papio anubis]
Length = 888
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 275/567 (48%), Positives = 391/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 242 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 301
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 302 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 361
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 362 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 421
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 422 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 481
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 482 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 541
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 542 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 601
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 602 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 661
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 662 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 721
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 722 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 781
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R ++PD W +P+
Sbjct: 782 KALVLPSPRPYVRIDGAVTPDHWLDPS 808
>gi|348551158|ref|XP_003461397.1| PREDICTED: DNA ligase 1-like [Cavia porcellus]
Length = 919
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 273/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW +G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 274 YHPIEDACWRQGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 333
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++ P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 334 LTLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAVEKGDIGLVAENSRSTQRL 393
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 394 MLPPPPLTTSGVFSKFRDIARLTGNASMTKKMDIIKGLFVACRHSEARFIARALSGRLRL 453
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 454 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTTEARKTWLEEQGMILKQTFCEVPD 513
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 514 LDRIIPVLLEHGLERLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEETAFTCEYKYDGQ 573
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 574 RAQIHLLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 633
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V ++I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 634 QPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSQRRQLLRENFVETEGE 693
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 694 FVFATSLDTKDMEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 753
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LEE SL
Sbjct: 754 VGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEQLEEHYQSL 813
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R ++PD W +P+
Sbjct: 814 QALVLPTPRPYVRADGAVAPDHWLDPS 840
>gi|297277489|ref|XP_002801368.1| PREDICTED: DNA ligase 1 isoform 4 [Macaca mulatta]
Length = 851
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 308/711 (43%), Positives = 437/711 (61%), Gaps = 37/711 (5%)
Query: 38 QKPKPLSSSLNPRRKMSSSAPNAFQVLMSAAAKKKPSPQPNSSSSSSSPKKRRTLDTQTP 97
QKP P S ++P R +S NA S P SS S PK+R +T T
Sbjct: 81 QKPAPDCSQVSPPRPATSPENNASLSDTS----------PTDSSPSGIPKRRTEAETLTE 130
Query: 98 KTTNSVVGEKIQEVAE----EPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKR-KVNVN 152
+ V + + E +P K +S+ P P+ KK K
Sbjct: 131 SVSEPEVATRQELQEEEEQTKPPRSAPKTLSSFF----------TPRKPAVKKEVKEEEP 180
Query: 153 SVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILI 212
KE AE + + P ACW+ G++VP++ ++ F+ I + R+ +
Sbjct: 181 GAPGKEGAAEGPLDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRM 240
Query: 213 TDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESH 272
+ + N+LR+V+ +P DL+PV+YL+ N + P +GLELG+GD ++KA+A+A GR
Sbjct: 241 VETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLES 300
Query: 273 VKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
V+ + E GD+GLVA+ SRS+Q +M P PLT + VF FR IA+ G S KK + IK
Sbjct: 301 VRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIK 360
Query: 333 ALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI-------- 384
L VA E +++ R L +LR+GLA Q++LAAL QA + PP +
Sbjct: 361 GLFVACRHSEARFIARSLSGRLRLGLAGQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKT 420
Query: 385 ----QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPT 440
++ LEE I+KQ F +P ++I+P LL G+ L C +PGIP+ PMLA PT
Sbjct: 421 AEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPT 480
Query: 441 KGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRL 500
+GVSE++ +F++ FTCEYKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ + ++
Sbjct: 481 RGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKI 540
Query: 501 KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQ 560
K PSV SF+LD E VA+DREK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG+
Sbjct: 541 KLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGE 600
Query: 561 PLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD 620
L++E L RR+ L ++F E G F FAT+L + D+++I +FL+ +V SCEGL++KT+D
Sbjct: 601 SLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLD 660
Query: 621 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNE 680
DATYE +KRS NWLKLKKDY++ +GD+LDLV I A+ GRGKR G YG FLLA YD ++E
Sbjct: 661 VDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSE 720
Query: 681 EFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
E Q+ICK+GTGFS+ LEE SL++ V+P PRPY R ++PD W +P+
Sbjct: 721 ELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVTPDHWLDPS 771
>gi|159489817|ref|XP_001702891.1| DNA ligase [Chlamydomonas reinhardtii]
gi|158271019|gb|EDO96848.1| DNA ligase [Chlamydomonas reinhardtii]
Length = 813
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 288/597 (48%), Positives = 394/597 (65%), Gaps = 27/597 (4%)
Query: 141 PPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVF 200
P +P+ V +++A K E D V W++G+ VP+ L+ F
Sbjct: 161 PTAPQMEGVGTGALAAASKYKEQ--------------DISAVISWKEGQPVPYSLLANTF 206
Query: 201 DMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIK 260
+ I+ T R+ I ++ + R ++ T P DL+P VYL N++APAH G+ELGIG+A++IK
Sbjct: 207 EAIAGTTKRLEIVALLVSAFRAILATNPPDLLPAVYLCVNRVAPAHTGIELGIGEATLIK 266
Query: 261 ALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAG 320
A+ EA G+ E+ +KK Y+E GDLG+V +RS+Q M P PLTI V F+ IA+ G
Sbjct: 267 AMCEATGKNEASIKKSYEEHGDLGVVVVGARSTQRTMFAPPPLTIASVLKAFQNIAQTTG 326
Query: 321 KDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKP 380
S ++K+ I LLVAA EP Y++R LQ+KLRIGLAEQ++L AL A H
Sbjct: 327 TKSGDQKRGMIVKLLVAAKGNEPGYIVRSLQAKLRIGLAEQSVLVALSHAV---HLHRGG 383
Query: 381 PPNIQSP-------LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIG 433
P ++ P LE A++VKQ +S P Y+ +VPALL G +L + C F PG+P+
Sbjct: 384 PAALKQPDVKLAEALEAGAQVVKQAYSECPSYDVLVPALLEHGSTDLLSRCHFMPGVPVK 443
Query: 434 PMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKFPD 492
PMLAK T GV E++ KF D+EFT EYKYDGERAQ+H L+ G +V I+SRNAE NT K+PD
Sbjct: 444 PMLAKATNGVGEVLEKFTDIEFTVEYKYDGERAQVHVLDGGKTVHIFSRNAENNTPKYPD 503
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAF 552
+V + L KP V S V D E VAYD EK+KILPFQ LSTRARK+V++ DIKV V ++AF
Sbjct: 504 IVSRIKGLLKPEVDSIVFDAEAVAYDPEKKKILPFQVLSTRARKDVAVDDIKVQVVLFAF 563
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCE 612
D LY NGQ LL + L RR LY S E+ G +A+ TS D++E++ FL+ +V+A E
Sbjct: 564 DCLYLNGQSLLHKPLTERRAALYGSLTEKEGELLYASYKTSRDVEELESFLNESVEAGTE 623
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
GLI+KT+ TYEPSKRS +WLKLKKDY+E +GD+ D+VP+ AF G+GKRTGV+GA+LL
Sbjct: 624 GLIVKTLGD--TYEPSKRSSHWLKLKKDYMEGVGDTFDVVPVGAFFGKGKRTGVFGAYLL 681
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
A YD + E +Q+I K+GTGFSE L + + ++R IP+PR YY + +++ PDVWF+
Sbjct: 682 AVYDPDTETYQTISKLGTGFSEEQLSQLAEAMRPHTIPQPRHYYTWDESLVPDVWFD 738
>gi|397486054|ref|XP_003814148.1| PREDICTED: DNA ligase 1 isoform 1 [Pan paniscus]
Length = 919
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 275/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 273 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 332
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 333 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 392
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 393 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 452
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 453 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 512
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 513 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 572
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 573 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 632
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 633 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 692
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 693 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 752
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 753 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 812
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R + PD W +P+
Sbjct: 813 KALVLPSPRPYVRIDGAVIPDHWLDPS 839
>gi|397486058|ref|XP_003814150.1| PREDICTED: DNA ligase 1 isoform 3 [Pan paniscus]
Length = 888
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 275/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 242 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 301
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 302 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 361
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 362 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 421
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 422 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 481
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 482 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 541
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 542 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 601
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 602 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 661
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 662 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 721
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 722 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 781
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R + PD W +P+
Sbjct: 782 KALVLPSPRPYVRIDGAVIPDHWLDPS 808
>gi|426389527|ref|XP_004061171.1| PREDICTED: DNA ligase 1 [Gorilla gorilla gorilla]
Length = 906
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 275/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 260 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 319
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 320 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 379
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 380 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 439
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 440 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKAAEARKTWLEEQGMILKQTFCEVPD 499
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 500 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 559
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 560 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 619
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 620 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 679
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 680 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 739
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 740 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 799
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R + PD W +P+
Sbjct: 800 KALVLPSPRPYVRIDGAVIPDHWLDPS 826
>gi|133892266|ref|NP_034845.2| DNA ligase 1 [Mus musculus]
gi|133892807|ref|NP_001076657.1| DNA ligase 1 [Mus musculus]
gi|313151236|ref|NP_001186239.1| DNA ligase 1 [Mus musculus]
gi|74150551|dbj|BAE32302.1| unnamed protein product [Mus musculus]
gi|187952925|gb|AAI38542.1| Lig1 protein [Mus musculus]
gi|223459942|gb|AAI38543.1| Lig1 protein [Mus musculus]
Length = 932
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 287 YHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPPDLLPVLY 346
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +
Sbjct: 347 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRL 406
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLTI+ VF F IA+ G S KK + IK L VA E +Y+ R L +LR+
Sbjct: 407 MLPPPPLTISGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRHSEARYIARSLSGRLRL 466
Query: 357 GLAEQTLLAALGQA------------AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA AV + K + LEE I+KQ F +P
Sbjct: 467 GLAEQSVLAALAQAVSLTPPGQEFPTAVVDAGKGKTAEARKMWLEEQGMILKQTFCEVPD 526
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++++FTCEYKYDG+
Sbjct: 527 LDRIIPVLLEHGLERLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEVDFTCEYKYDGQ 586
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 587 RAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQI 646
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L+++ L RR+ L ++F E G
Sbjct: 647 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRRRQLLRENFVETEGE 706
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F F T+L + D ++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 707 FVFTTSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 766
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LEE SL
Sbjct: 767 VGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEHHQSL 826
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R ++PD W +P+
Sbjct: 827 QALVLPTPRPYVRIDGAVAPDHWLDPS 853
>gi|4557719|ref|NP_000225.1| DNA ligase 1 [Homo sapiens]
gi|118773|sp|P18858.1|DNLI1_HUMAN RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|21780372|gb|AAM77697.1|AF527418_1 ligase I, DNA, ATP-dependent [Homo sapiens]
gi|187143|gb|AAA59518.1| DNA ligase I [Homo sapiens]
gi|80474360|gb|AAI08319.1| Ligase I, DNA, ATP-dependent [Homo sapiens]
gi|119572701|gb|EAW52316.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|189054890|dbj|BAG36885.1| unnamed protein product [Homo sapiens]
Length = 919
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 273 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 332
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 333 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 392
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 393 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 452
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 453 GLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 512
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+G+SE++ +F++ FTCEYKYDG+
Sbjct: 513 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQ 572
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 573 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 632
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 633 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 692
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 693 FVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 752
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 753 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 812
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R + PD W +P+
Sbjct: 813 KALVLPSPRPYVRIDGAVIPDHWLDPS 839
>gi|410221310|gb|JAA07874.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
gi|410251416|gb|JAA13675.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
gi|410288274|gb|JAA22737.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
gi|410353221|gb|JAA43214.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
Length = 919
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 273 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 332
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 333 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 392
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 393 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 452
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 453 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 512
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 513 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 572
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 573 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 632
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 633 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 692
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 693 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 752
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ L+E SL
Sbjct: 753 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELDEHHQSL 812
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R + PD W +P+
Sbjct: 813 KALVLPSPRPYVRIDGAVIPDHWLDPS 839
>gi|109125447|ref|XP_001111346.1| PREDICTED: DNA ligase 1 isoform 1 [Macaca mulatta]
Length = 919
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 273 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 332
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 333 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 392
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 393 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 452
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLA Q++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 453 GLAGQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 512
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 513 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 572
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 573 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 632
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 633 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 692
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 693 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 752
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 753 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 812
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R ++PD W +P+
Sbjct: 813 KALVLPSPRPYVRIDGAVTPDHWLDPS 839
>gi|397486056|ref|XP_003814149.1| PREDICTED: DNA ligase 1 isoform 2 [Pan paniscus]
Length = 851
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 205 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 264
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 265 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 324
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 325 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 384
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 385 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 444
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 445 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 504
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 505 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 564
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 565 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 624
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 625 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 684
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 685 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 744
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R + PD W +P+
Sbjct: 745 KALVLPSPRPYVRIDGAVIPDHWLDPS 771
>gi|194390694|dbj|BAG62106.1| unnamed protein product [Homo sapiens]
Length = 888
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 242 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 301
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 302 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 361
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 362 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 421
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 422 GLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 481
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+G+SE++ +F++ FTCEYKYDG+
Sbjct: 482 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQ 541
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 542 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 601
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 602 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 661
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 662 FVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 721
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 722 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 781
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R + PD W +P+
Sbjct: 782 KALVLPSPRPYVRIDGAVIPDHWLDPS 808
>gi|119572702|gb|EAW52317.1| ligase I, DNA, ATP-dependent, isoform CRA_b [Homo sapiens]
Length = 889
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 243 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 302
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 303 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 362
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 363 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 422
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 423 GLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 482
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+G+SE++ +F++ FTCEYKYDG+
Sbjct: 483 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQ 542
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 543 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 602
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 603 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 662
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 663 FVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 722
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 723 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 782
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R + PD W +P+
Sbjct: 783 KALVLPSPRPYVRIDGAVIPDHWLDPS 809
>gi|297277487|ref|XP_002801367.1| PREDICTED: DNA ligase 1 isoform 3 [Macaca mulatta]
Length = 888
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 242 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 301
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 302 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 361
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 362 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 421
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLA Q++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 422 GLAGQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 481
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 482 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 541
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 542 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 601
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 602 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 661
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 662 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 721
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 722 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 781
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R ++PD W +P+
Sbjct: 782 KALVLPSPRPYVRIDGAVTPDHWLDPS 808
>gi|330790648|ref|XP_003283408.1| hypothetical protein DICPUDRAFT_25751 [Dictyostelium purpureum]
gi|325086673|gb|EGC40059.1| hypothetical protein DICPUDRAFT_25751 [Dictyostelium purpureum]
Length = 648
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 280/582 (48%), Positives = 400/582 (68%), Gaps = 15/582 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P A W+KG+ +P++ L+ F+ I + + R++I + + N+ R++M +P+DLV +Y
Sbjct: 1 YHPIDDAMWKKGDSLPYMALAKTFETIESYSSRLVIIEHLTNLFRSIMLLSPKDLVMTIY 60
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ NKI P++E ELGIGD +IK++AE+ GRT +K++ E+GDLG++A+ +R +Q +
Sbjct: 61 LSINKIGPSYEAKELGIGDHILIKSVAESTGRTVDAIKQELVEVGDLGIIAQNARMTQPL 120
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKD--SQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
M P PLTI VF TF+ IA +G SQ+KK ++IK LL+A DCE Y+IR LQ KL
Sbjct: 121 MFSPPPLTIASVFKTFQQIADTSGTGTGSQKKKMDQIKKLLIACKDCESLYIIRSLQGKL 180
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNI------QSPLEEAAKI------VKQVFSVL 402
RIGLAE+++L AL +A + ++ PP + P E K V + +S L
Sbjct: 181 RIGLAERSVLMALAKAVLVTPPSTEFPPKVIDIRKNMRPEEFEEKYSNTVAKVTRAYSQL 240
Query: 403 PVYEKIVPALL-TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
P Y+ VP L DG+ N+ TCS GIP+ PMLA+PT G+++++++F DMEFTCE+KY
Sbjct: 241 PNYDLFVPHLCEKDGIDNILKTCSLNVGIPVKPMLAQPTTGITQMLDRFTDMEFTCEFKY 300
Query: 462 DGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK 521
DGERAQIHYLEDGSV IY+RN E TGK+PD+ V + P+V+SF+LDCE VA+D+
Sbjct: 301 DGERAQIHYLEDGSVHIYTRNLEDYTGKYPDIAANVKKFIGPNVKSFILDCEAVAFDKAT 360
Query: 522 QKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEE 581
+KIL FQ LSTRARK+V L IKV VC++AFD+L+ NG+ L+ E RRE + ++F
Sbjct: 361 KKILSFQVLSTRARKSVQLDQIKVPVCVFAFDLLFLNGKNLINEPFYKRREVMVENFVPS 420
Query: 582 PGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDY 641
G F FA D+++IQ +L+ AV+ +CEGL++KT+ + YEPS+RS NWLK+KKDY
Sbjct: 421 DGVFSFAKYANISDVNDIQSYLEEAVEGNCEGLMVKTLKEKSIYEPSRRSYNWLKIKKDY 480
Query: 642 IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERS 701
++ + DSLDLVPI A++G+GKRTG YGA+LLACYD +NEEFQ++CKIGTGFS+ L +
Sbjct: 481 MQGMTDSLDLVPIGAWYGKGKRTGTYGAYLLACYDEDNEEFQTLCKIGTGFSDKDLSSFT 540
Query: 702 SSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
L+ VI +PR +R +D+I PDVW P++ E + SI
Sbjct: 541 EQLKPHVINQPRNMFRISDSIKPDVWLSPSQVWEVLAADLSI 582
>gi|20271416|gb|AAH28287.1| Lig1 protein [Mus musculus]
Length = 916
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 271 YHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPPDLLPVLY 330
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +
Sbjct: 331 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRL 390
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLTI+ VF F IA+ G S KK + IK L VA E +Y+ R L +LR+
Sbjct: 391 MLPPPPLTISGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRHSEARYIARSLSGRLRL 450
Query: 357 GLAEQTLLAALGQA------------AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA AV + K + LEE I+KQ F +P
Sbjct: 451 GLAEQSVLAALAQAVSLTPPGQEFPTAVVDAGKGKTAEARKMWLEEQGMILKQTFCEVPD 510
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++++FTCEYKYDG+
Sbjct: 511 LDRIIPVLLEHGLERLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEVDFTCEYKYDGQ 570
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 571 RAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQI 630
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L+++ L RR+ L ++F E G
Sbjct: 631 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRRRQLLRENFVETEGE 690
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F F T+L + D ++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 691 FVFTTSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 750
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LEE SL
Sbjct: 751 VGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEHHQSL 810
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R ++PD W +P+
Sbjct: 811 QALVLPTPRPYVRIDGAVAPDHWLDPS 837
>gi|297277484|ref|XP_002801366.1| PREDICTED: DNA ligase 1 isoform 2 [Macaca mulatta]
Length = 975
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 329 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 388
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 389 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 448
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 449 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 508
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLA Q++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 509 GLAGQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 568
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 569 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 628
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 629 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 688
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 689 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 748
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 749 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 808
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 809 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 868
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R ++PD W +P+
Sbjct: 869 KALVLPSPRPYVRIDGAVTPDHWLDPS 895
>gi|194386400|dbj|BAG59764.1| unnamed protein product [Homo sapiens]
Length = 851
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 205 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 264
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 265 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 324
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 325 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 384
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 385 GLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 444
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+G+SE++ +F++ FTCEYKYDG+
Sbjct: 445 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQ 504
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 505 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 564
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 565 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 624
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 625 FVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 684
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 685 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 744
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R + PD W +P+
Sbjct: 745 KALVLPSPRPYVRIDGAVIPDHWLDPS 771
>gi|148706114|gb|EDL38061.1| ligase I, DNA, ATP-dependent, isoform CRA_b [Mus musculus]
Length = 938
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/573 (47%), Positives = 390/573 (68%), Gaps = 24/573 (4%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 293 YHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPPDLLPVLY 352
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +
Sbjct: 353 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRL 412
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLTI+ VF F IA+ G S KK + IK L VA E +Y+ R L +LR+
Sbjct: 413 MLPPPPLTISGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRHSEARYIARSLSGRLRL 472
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSP------------------LEEAAKIVKQV 398
GLAEQ++LAAL QA S PP + P LEE I+KQ
Sbjct: 473 GLAEQSVLAALAQAV------SLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQGMILKQT 526
Query: 399 FSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
F +P ++I+P LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++++FTCE
Sbjct: 527 FCEVPDLDRIIPVLLEHGLERLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEVDFTCE 586
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
YKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+D
Sbjct: 587 YKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFILDTEAVAWD 646
Query: 519 REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
REK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L+++ L RR+ L ++F
Sbjct: 647 REKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRRRQLLRENF 706
Query: 579 EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638
E G F F T+L + D ++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLK
Sbjct: 707 VETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLK 766
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
KDY++ +GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LE
Sbjct: 767 KDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELE 826
Query: 699 ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
E SL++ V+P PRPY R ++PD W +P+
Sbjct: 827 EHHQSLQALVLPTPRPYVRIDGAVAPDHWLDPS 859
>gi|148706115|gb|EDL38062.1| ligase I, DNA, ATP-dependent, isoform CRA_c [Mus musculus]
Length = 932
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/573 (47%), Positives = 390/573 (68%), Gaps = 24/573 (4%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 287 YHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPPDLLPVLY 346
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +
Sbjct: 347 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRL 406
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLTI+ VF F IA+ G S KK + IK L VA E +Y+ R L +LR+
Sbjct: 407 MLPPPPLTISGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRHSEARYIARSLSGRLRL 466
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSP------------------LEEAAKIVKQV 398
GLAEQ++LAAL QA S PP + P LEE I+KQ
Sbjct: 467 GLAEQSVLAALAQAV------SLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQGMILKQT 520
Query: 399 FSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
F +P ++I+P LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++++FTCE
Sbjct: 521 FCEVPDLDRIIPVLLEHGLERLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEVDFTCE 580
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
YKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+D
Sbjct: 581 YKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFILDTEAVAWD 640
Query: 519 REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
REK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L+++ L RR+ L ++F
Sbjct: 641 REKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRRRQLLRENF 700
Query: 579 EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638
E G F F T+L + D ++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLK
Sbjct: 701 VETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLK 760
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
KDY++ +GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LE
Sbjct: 761 KDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELE 820
Query: 699 ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
E SL++ V+P PRPY R ++PD W +P+
Sbjct: 821 EHHQSLQALVLPTPRPYVRIDGAVAPDHWLDPS 853
>gi|281348405|gb|EFB23989.1| hypothetical protein PANDA_006333 [Ailuropoda melanoleuca]
Length = 909
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/567 (48%), Positives = 389/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DLVPV+Y
Sbjct: 263 YHPIDDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLVPVLY 322
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ +++ P +GLELG+GD ++KA+A+A GR VK + E GD+GLVA+ SRS+Q +
Sbjct: 323 LSLSRLGPPQQGLELGVGDGVLLKAVAQATGRQLESVKAEAAEKGDVGLVAENSRSTQRL 382
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P LT VF FR IA+ AG S KK + IK L VA E +Y+ R L +LR+
Sbjct: 383 MLPPPALTAAGVFTKFRDIARLAGSASTAKKMDVIKGLFVACRHSEARYIARALSGRLRL 442
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE A I+KQ F +P
Sbjct: 443 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGRTAEARKTWLEEQAMILKQTFCEVPD 502
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 503 LDRIIPVLLEHGLERLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 562
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 563 RAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 622
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V ++I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 623 QPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 682
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D D+I +FL+ +V SCEGL++KT+D +ATYE +KRS NWLKLKKDY++
Sbjct: 683 FVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVNATYEIAKRSHNWLKLKKDYLDG 742
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LEE L
Sbjct: 743 VGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEHHRKL 802
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R ++PD W +P+
Sbjct: 803 QALVLPTPRPYVRADGAVAPDHWLDPS 829
>gi|290977272|ref|XP_002671362.1| predicted protein [Naegleria gruberi]
gi|284084930|gb|EFC38618.1| predicted protein [Naegleria gruberi]
Length = 846
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/566 (48%), Positives = 388/566 (68%), Gaps = 15/566 (2%)
Query: 177 FDPKMVACWEKGER-------------VPFIFLSLVFDMISNETGRILITDIVCNMLRTV 223
+DP A W+ G R P++FL+ D IS I T+++CN R++
Sbjct: 206 YDPIASATWKTGNRFVFTTLILSKFKSAPYLFLAKTLDEISKIGSSIKKTELLCNCFRSI 265
Query: 224 METTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDL 283
+ T+P DL+ VYL+ NK+AP+H G+ELG+G++ I+KALAEA G+T +K+ + GDL
Sbjct: 266 IATSPSDLLYSVYLSINKLAPSHFGIELGVGESLIMKALAEATGKTLKKIKELSVKEGDL 325
Query: 284 GLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEP 343
GLVA +RS+Q M KP LT+ V+D+F+ IA GK S K +IK LLV++ D EP
Sbjct: 326 GLVANVARSTQKTMFKPKSLTLKSVYDSFKFIATTEGKKSMNTKVEKIKLLLVSSVDVEP 385
Query: 344 QYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLP 403
++IR LQ KLRIGL E+T+L AL A + + K ++ L+ A + +K V+S LP
Sbjct: 386 MFIIRSLQGKLRIGLGEETVLIALSHAILLSRGGKKVLD--EADLKFAKETLKSVYSELP 443
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
Y+ I+PALL G L + C PG P+ PMLAK KGV E+ ++F + EFTCE+KYDG
Sbjct: 444 SYDDIIPALLEHGFEKLHDICHLKPGFPVRPMLAKSAKGVQELFDRFGEKEFTCEFKYDG 503
Query: 464 ERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQK 523
ERAQIH L D S++I+SRN E +T K+PD++ + ++ K V+SF++DCE+VA+D ++K
Sbjct: 504 ERAQIHMLPDKSIKIFSRNMENHTSKYPDLIQMLPQVTKEHVKSFIIDCEVVAFDPIEKK 563
Query: 524 ILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG 583
I PFQ LSTR RKN++++DIKV VC++AFDILY NG+ L++ L+ RR L+DSF
Sbjct: 564 IKPFQVLSTRGRKNININDIKVQVCLFAFDILYINGESCLKKNLKERRGILHDSFATSDD 623
Query: 584 FFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE 643
F FA+ + DL++IQ FL+ ++ +CEGL++KT++ DATYEPSKRS NWLKLKKDYIE
Sbjct: 624 KFMFASHRDTNDLNDIQVFLEDSIKGNCEGLMVKTLEVDATYEPSKRSFNWLKLKKDYIE 683
Query: 644 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSS 703
+GDS+DLV I + GRGKRTGVYG FLLAC+D ++++QSICKIGTGFS+ ML+E +
Sbjct: 684 GLGDSVDLVVIGGYKGRGKRTGVYGGFLLACFDPESDQYQSICKIGTGFSDEMLKECADK 743
Query: 704 LRSKVIPKPRPYYRFADTISPDVWFE 729
+ +I P+ Y+ F ++ PDVWF+
Sbjct: 744 MNEHIISAPKSYFSFRESQRPDVWFD 769
>gi|148706113|gb|EDL38060.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
Length = 934
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/573 (47%), Positives = 390/573 (68%), Gaps = 24/573 (4%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 289 YHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPPDLLPVLY 348
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +
Sbjct: 349 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRL 408
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLTI+ VF F IA+ G S KK + IK L VA E +Y+ R L +LR+
Sbjct: 409 MLPPPPLTISGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRHSEARYIARSLSGRLRL 468
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSP------------------LEEAAKIVKQV 398
GLAEQ++LAAL QA S PP + P LEE I+KQ
Sbjct: 469 GLAEQSVLAALAQAV------SLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQGMILKQT 522
Query: 399 FSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
F +P ++I+P LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++++FTCE
Sbjct: 523 FCEVPDLDRIIPVLLEHGLERLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEVDFTCE 582
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
YKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+D
Sbjct: 583 YKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFILDTEAVAWD 642
Query: 519 REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
REK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L+++ L RR+ L ++F
Sbjct: 643 REKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRRRQLLRENF 702
Query: 579 EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638
E G F F T+L + D ++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLK
Sbjct: 703 VETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLK 762
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
KDY++ +GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LE
Sbjct: 763 KDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELE 822
Query: 699 ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
E SL++ V+P PRPY R ++PD W +P+
Sbjct: 823 EHHQSLQALVLPTPRPYVRIDGAVAPDHWLDPS 855
>gi|301765093|ref|XP_002917926.1| PREDICTED: DNA ligase 1-like [Ailuropoda melanoleuca]
Length = 911
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/567 (48%), Positives = 389/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DLVPV+Y
Sbjct: 265 YHPIDDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLVPVLY 324
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ +++ P +GLELG+GD ++KA+A+A GR VK + E GD+GLVA+ SRS+Q +
Sbjct: 325 LSLSRLGPPQQGLELGVGDGVLLKAVAQATGRQLESVKAEAAEKGDVGLVAENSRSTQRL 384
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P LT VF FR IA+ AG S KK + IK L VA E +Y+ R L +LR+
Sbjct: 385 MLPPPALTAAGVFTKFRDIARLAGSASTAKKMDVIKGLFVACRHSEARYIARALSGRLRL 444
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE A I+KQ F +P
Sbjct: 445 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGRTAEARKTWLEEQAMILKQTFCEVPD 504
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 505 LDRIIPVLLEHGLERLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 564
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 565 RAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 624
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V ++I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 625 QPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 684
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D D+I +FL+ +V SCEGL++KT+D +ATYE +KRS NWLKLKKDY++
Sbjct: 685 FVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVNATYEIAKRSHNWLKLKKDYLDG 744
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LEE L
Sbjct: 745 VGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEHHRKL 804
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R ++PD W +P+
Sbjct: 805 QALVLPTPRPYVRADGAVAPDHWLDPS 831
>gi|410054237|ref|XP_001170212.3| PREDICTED: DNA ligase 1 isoform 4 [Pan troglodytes]
Length = 936
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 273 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 332
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 333 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 392
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 393 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 452
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 453 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 512
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 513 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 572
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 573 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 632
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 633 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 692
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 693 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 752
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ L+E SL
Sbjct: 753 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELDEHHQSL 812
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R + PD W +P+
Sbjct: 813 KALVLPSPRPYVRIDGAVIPDHWLDPS 839
>gi|194215708|ref|XP_001488637.2| PREDICTED: DNA ligase 1 [Equus caballus]
Length = 913
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/568 (48%), Positives = 392/568 (69%), Gaps = 13/568 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+P++Y
Sbjct: 266 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPILY 325
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELGIGD ++KA+A+A GR V+ + E GD+GLVA++SRS+Q +
Sbjct: 326 LSLNRLGPPQQGLELGIGDGILLKAVAQATGRQLESVRAEAAEKGDVGLVAESSRSTQRL 385
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P LT + VF F+ IA+ AG S KK + IK L VA E +++ R L +LR+
Sbjct: 386 MLPPPALTASGVFTKFQDIARLAGSASTTKKMDVIKGLFVACRHSEARFIARALSGRLRL 445
Query: 357 GLAEQTLLAALGQA------------AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA AV + K P ++ LEE I+KQ F +P
Sbjct: 446 GLAEQSVLAALAQAVSLTPPGQEFPPAVVDAGKGKTPEARKTWLEEQGMILKQTFCEVPD 505
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++IVP LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 506 LDRIVPVLLEHGLERLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 565
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PDV+ + +++ PSV SF+LD E VA+DREK++I
Sbjct: 566 RAQIHVLEGGEVKIFSRNQEDNTGKYPDVISRIPKIRLPSVTSFILDTEAVAWDREKKQI 625
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V ++I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 626 QPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGKSLVREPLSRRRQLLRENFVETEGE 685
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D D+I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 686 FVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 745
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI-GTGFSEAMLEERSSS 703
+GD+LDLV I A+ GRGKR G YG FLLACYD +EE Q+ICK+ G GFS+ LEE S
Sbjct: 746 VGDTLDLVVIGAYLGRGKRAGRYGGFLLACYDEESEELQAICKVLGAGFSDEKLEEHHCS 805
Query: 704 LRSKVIPKPRPYYRFADTISPDVWFEPT 731
L++ V+P PRPY R ++PD W +P+
Sbjct: 806 LQALVLPSPRPYVRADGAVAPDHWLDPS 833
>gi|1352290|sp|P37913.2|DNLI1_MOUSE RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|641912|gb|AAB60500.1| DNA ligase I [Mus musculus]
gi|905354|gb|AAA70403.1| DNA ligase I [Mus musculus]
Length = 916
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/573 (47%), Positives = 390/573 (68%), Gaps = 24/573 (4%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 271 YHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPPDLLPVLY 330
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +
Sbjct: 331 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRL 390
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLTI+ VF F IA+ G S KK + IK L VA E +Y+ R L +LR+
Sbjct: 391 MLPPPPLTISGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRHSEARYIARSLSGRLRL 450
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSP------------------LEEAAKIVKQV 398
GLAEQ++LAAL QA S PP + P LEE I+KQ
Sbjct: 451 GLAEQSVLAALAQAV------SLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQGMILKQT 504
Query: 399 FSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
F +P ++I+P LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++++FTCE
Sbjct: 505 FCEVPDLDRIIPVLLEHGLERLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEVDFTCE 564
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
YKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+D
Sbjct: 565 YKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFILDTEAVAWD 624
Query: 519 REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
REK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L+++ L RR+ L ++F
Sbjct: 625 REKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRRRQLLRENF 684
Query: 579 EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638
E G F F T+L + D ++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLK
Sbjct: 685 VETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLK 744
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
KDY++ +GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LE
Sbjct: 745 KDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELE 804
Query: 699 ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
E SL++ V+P PRPY R ++PD W +P+
Sbjct: 805 EHHQSLQALVLPTPRPYVRIDGAVAPDHWLDPS 837
>gi|344269407|ref|XP_003406544.1| PREDICTED: DNA ligase 1 [Loxodonta africana]
Length = 917
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ + + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 271 YHPIEDACWKSGQKVPYLAVARTFEKVEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 330
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA++SR++Q +
Sbjct: 331 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAESSRTTQRI 390
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ AG S KK + IK L VA E +++ R L +LR+
Sbjct: 391 MLPPPPLTASGVFAKFRDIARLAGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 450
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSP------------LEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + L+E ++KQ F +P
Sbjct: 451 GLAEQSVLAALAQAVSLTPPGQEFPPAVVDAGKGRTAEARKMWLDEQGMVLKQTFCEVPD 510
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
+ IVP LL G+ +L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 511 LDCIVPVLLEHGLEHLPEHCRLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 570
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 571 RAQIHVLEGGEVKIFSRNQEDNTGKYPDIIDRIPKIKLPSVTSFILDTEAVAWDREKKQI 630
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK+V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 631 QPFQVLTTRKRKDVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 690
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D D+I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY+E
Sbjct: 691 FVFATSLDTKDTDQIAEFLEQSVRDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEG 750
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LE+ SL
Sbjct: 751 VGDTLDLVVIGAYLGRGKRAGRYGGFLLATYDKESEELQAICKLGTGFSDEELEKHHQSL 810
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PR Y R ++PD W EP+
Sbjct: 811 QALVLPSPRSYVRADGAVAPDHWLEPS 837
>gi|149028347|gb|EDL83753.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Rattus norvegicus]
gi|149028348|gb|EDL83754.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Rattus norvegicus]
Length = 928
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 270/567 (47%), Positives = 391/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 283 YHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPTDLLPVLY 342
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +
Sbjct: 343 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRL 402
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT++ VF F IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 403 MLPPPPLTVSGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRYSEARFIARSLSGRLRL 462
Query: 357 GLAEQTLLAALGQA------------AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA AV + K + LEE I+KQ F +P
Sbjct: 463 GLAEQSVLAALAQAVSLTPPGQEFPTAVVDAGKGKTAEARKMWLEEQGMILKQTFCEVPD 522
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ +L C +PG+P+ PMLA PT+GV E++ +F++++FTCEYKYDG+
Sbjct: 523 LDRIIPVLLEHGLESLPEHCKLSPGVPLKPMLAHPTRGVREVLKRFEEVDFTCEYKYDGQ 582
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E N+GK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 583 RAQIHVLEGGEVKIFSRNQEDNSGKYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQI 642
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L ++ L RR+ L ++F E G
Sbjct: 643 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLARQPLSRRRQLLRENFVETEGE 702
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY+E
Sbjct: 703 FVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEG 762
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LEE S+
Sbjct: 763 VGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEHHQSM 822
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ ++P PRPY R ++PD W +P+
Sbjct: 823 QALLLPTPRPYVRIDGAVAPDHWLDPS 849
>gi|297705333|ref|XP_002829532.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1 [Pongo abelii]
Length = 920
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 388/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 274 YHPLEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 333
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 334 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRHLESVRAEAAEKGDMGLVAENSRSTQRL 393
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 394 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACHHSEARFIARSLSGRLRL 453
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 454 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 513
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 514 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 573
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+D EK++I
Sbjct: 574 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKVKCPSVTSFILDTEAVAWDHEKKQI 633
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 634 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 693
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY+
Sbjct: 694 FVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLNG 753
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 754 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 813
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R + PD W +P+
Sbjct: 814 KALVLPSPRPYVRIDGAVIPDHWLDPS 840
>gi|322801939|gb|EFZ22486.1| hypothetical protein SINV_00170 [Solenopsis invicta]
Length = 759
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 290/661 (43%), Positives = 413/661 (62%), Gaps = 34/661 (5%)
Query: 106 EKIQEVAEEPS-NDLVKPISNQIDNPIDSEKESQP---------------TPPSPKKRKV 149
++ EV ++PS NDL S+ + S+KE+ P T P K +KV
Sbjct: 21 DETSEVNKDPSDNDLNNSASDNEEKNESSKKETTPEKSPTTSKNESPKKETIPEKKAKKV 80
Query: 150 N------VNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMI 203
+ + +K+ KS A + P ACW++G++ P+ + ++I
Sbjct: 81 HNFFMPKQKDDTKNDKVKNAKSISQSYNPGASVYHPIDDACWKRGDKTPYSAFTRTLEII 140
Query: 204 SNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALA 263
+ R+ I +I+ N R+V+ PEDL+P VYL N++APA+EG+ELG+ D +++KA+A
Sbjct: 141 EETSARLKIIEILSNYFRSVIVLNPEDLLPSVYLCLNQLAPAYEGIELGVADMNLMKAIA 200
Query: 264 EACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDS 323
+ GRT + ++ QE+GDLG+VA+ SRS+Q M +P PLT+ V+ + IA+ G+ S
Sbjct: 201 QCTGRTLAQIRADVQEVGDLGIVAEGSRSNQRTMFQPAPLTVPNVYSKLKEIAQMTGQAS 260
Query: 324 QEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPN 383
KK ++I+ L VA + E +YLIR L KLRIGLAEQ++L AL A PP
Sbjct: 261 LSKKLDKIQTLFVACRNTEARYLIRSLAGKLRIGLAEQSVLQALALACAMTPPQQSYPPE 320
Query: 384 I------------QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIP 431
I + +E A I+K + P Y I+P LL DG+ L + C TPGIP
Sbjct: 321 ILNASKKMSSDRFKEKYDEIALILKTTYCECPNYNLIIPVLLEDGINALPSKCKLTPGIP 380
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFP 491
+ PMLA PTKGV E++ +F+ ++FTCE+KYDGERAQIH ++G V IYSRN E NT K+P
Sbjct: 381 LKPMLAHPTKGVQEVLTRFEGLKFTCEWKYDGERAQIHVADNGQVNIYSRNQENNTSKYP 440
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYA 551
D++ V++ +LDCE VA+DREK +ILPFQ LSTR RK+ + DIKV VC++
Sbjct: 441 DIIKRFKNTCGDLVKNCILDCEAVAWDREKNQILPFQILSTRKRKDANEEDIKVQVCVFM 500
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASC 611
FD+LY N +PL++E RRE L F+E G ++FAT+L + ++E++ FLD +V +C
Sbjct: 501 FDLLYLNDEPLVKEPFIKRRELLKQHFKEVEGEWKFATSLDTTTMEEVEVFLDESVKGNC 560
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
EGL++KT+++DATYE +KRS NWLKLKKDY++ +GD+LD+V I + G+GKRTG YG FL
Sbjct: 561 EGLMVKTLEKDATYEIAKRSRNWLKLKKDYLDGVGDTLDVVVIGGYIGKGKRTGTYGGFL 620
Query: 672 LACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
LACYD NEE+QSICKIGTGF E LE + + VIP+ + YYRF + PD WFEP
Sbjct: 621 LACYDQENEEYQSICKIGTGFKEDDLETHTKFFKDHVIPQAKSYYRFDSSHEPDHWFEPI 680
Query: 732 E 732
+
Sbjct: 681 Q 681
>gi|74183394|dbj|BAE36577.1| unnamed protein product [Mus musculus]
Length = 699
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 273/567 (48%), Positives = 389/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 54 YHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPPDLLPVLY 113
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +
Sbjct: 114 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRL 173
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLTI+ VF F IA+ G S KK + IK L VA E +Y+ R L +LR+
Sbjct: 174 MLPPPPLTISGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRHSEARYIARSLSGRLRL 233
Query: 357 GLAEQTLLAALGQA------------AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA AV + K + LEE I+KQ F +P
Sbjct: 234 GLAEQSVLAALAQAVSLTPPGQEFPTAVVDAGKGKTAEARKMWLEEQGMILKQTFCEVPD 293
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++++FTCEYKYDG+
Sbjct: 294 LDRIIPVLLEHGLERLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEVDFTCEYKYDGQ 353
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 354 RAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQI 413
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L+++ L RR+ L ++F E G
Sbjct: 414 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRRRQLLRENFVETEGE 473
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F F T+L + D ++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 474 FVFTTSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 533
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+G GFS+ LEE SL
Sbjct: 534 VGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGNGFSDEELEEHHQSL 593
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R ++PD W +P+
Sbjct: 594 QALVLPTPRPYVRIDGAVAPDHWLDPS 620
>gi|392343903|ref|XP_003748816.1| PREDICTED: DNA ligase 1-like, partial [Rattus norvegicus]
Length = 831
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 270/567 (47%), Positives = 391/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 186 YHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPTDLLPVLY 245
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +
Sbjct: 246 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRL 305
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT++ VF F IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 306 MLPPPPLTVSGVFTKFCDIARLTGSASMSKKMDIIKGLFVACRYSEARFIARSLSGRLRL 365
Query: 357 GLAEQTLLAALGQA------------AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA AV + K + LEE I+KQ F +P
Sbjct: 366 GLAEQSVLAALAQAVSLTPPGQEFPTAVVDAGKGKTAEARKMWLEEQGMILKQTFCEVPD 425
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ +L C +PG+P+ PMLA PT+GV E++ +F++++FTCEYKYDG+
Sbjct: 426 LDRIIPVLLEHGLESLPEHCKLSPGVPLKPMLAHPTRGVREVLKRFEEVDFTCEYKYDGQ 485
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E N+GK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 486 RAQIHVLEGGEVKIFSRNQEDNSGKYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQI 545
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L ++ L RR+ L ++F E G
Sbjct: 546 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLARQPLSRRRQLLRENFVETEGE 605
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY+E
Sbjct: 606 FVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEG 665
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LEE S+
Sbjct: 666 VGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEHHQSM 725
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ ++P PRPY R ++PD W +P+
Sbjct: 726 QALLLPTPRPYVRIDGAVAPDHWLDPS 752
>gi|66730439|ref|NP_001019439.1| DNA ligase 1 [Rattus norvegicus]
gi|62471446|gb|AAH93604.1| Ligase I, DNA, ATP-dependent [Rattus norvegicus]
Length = 913
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 270/567 (47%), Positives = 391/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 268 YHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPTDLLPVLY 327
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +
Sbjct: 328 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRL 387
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT++ VF F IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 388 MLPPPPLTVSGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRYSEARFIARSLSGRLRL 447
Query: 357 GLAEQTLLAALGQA------------AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA AV + K + LEE I+KQ F +P
Sbjct: 448 GLAEQSVLAALAQAVSLTPPGQEFPTAVVDAGKGKTAEARKMWLEEQGMILKQTFCEVPD 507
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ +L C +PG+P+ PMLA PT+GV E++ +F++++FTCEYKYDG+
Sbjct: 508 LDRIIPVLLEHGLESLPEHCKLSPGVPLKPMLAHPTRGVREVLKRFEEVDFTCEYKYDGQ 567
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E N+GK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 568 RAQIHVLEGGEVKIFSRNQEDNSGKYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQI 627
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L ++ L RR+ L ++F E G
Sbjct: 628 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLARQPLSRRRQLLRENFVETEGE 687
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY+E
Sbjct: 688 FVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEG 747
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LEE S+
Sbjct: 748 VGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEHHQSM 807
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ ++P PRPY R ++PD W +P+
Sbjct: 808 QALLLPTPRPYVRIDGAVAPDHWLDPS 834
>gi|156523208|ref|NP_001096018.1| DNA ligase 1 [Bos taurus]
gi|134025125|gb|AAI34519.1| LIG1 protein [Bos taurus]
gi|296477394|tpg|DAA19509.1| TPA: DNA ligase (ATP) 1 [Bos taurus]
Length = 916
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 273/568 (48%), Positives = 390/568 (68%), Gaps = 12/568 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G+RVP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 270 YHPIEDACWKAGQRVPYLAVARAFEKIEEVSARLRMVETLSNLLRSVVALSPADLLPVLY 329
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELGIG+ ++KA+A+A GR V+ + E GD+GLVA++SRS+Q +
Sbjct: 330 LSLNRLGPPQQGLELGIGEGILLKAVAQATGRQLESVRAEVAEKGDVGLVAESSRSTQRL 389
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
+ P LT VF FR IA+ AG S KK + IK L VA E +++ R L +LR+
Sbjct: 390 VLPPPALTAAGVFAKFRDIAQLAGSASTTKKIDVIKGLFVACRHSEARFIARALSGRLRL 449
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 450 GLAEQSVLAALAQAVSLTPPSQECPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 509
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
E+IVP LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 510 LERIVPVLLEHGLERLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 569
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTG++PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 570 RAQIHVLEGGEVKIFSRNQEDNTGRYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 629
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V ++I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 630 QPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGKSLVREPLSRRRQLLRENFVETEGE 689
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D ++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY+E
Sbjct: 690 FVFATSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEG 749
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ G+GKR G YG FLLA YD +EEFQ+ICK+GTGFS+ LEE L
Sbjct: 750 VGDTLDLVVIGAYLGKGKRAGRYGGFLLASYDEESEEFQAICKLGTGFSDEELEEHHQRL 809
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTE 732
++ V+P PR Y R ++PD W +P++
Sbjct: 810 QALVLPTPRSYVRADGAVAPDHWLDPSD 837
>gi|328780199|ref|XP_392286.4| PREDICTED: DNA ligase 1-like [Apis mellifera]
Length = 677
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 270/579 (46%), Positives = 392/579 (67%), Gaps = 12/579 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
++P ACW+ E+VP+I L+ ++I + + R+ I +I+ N R+V+ + +DL+P +Y
Sbjct: 33 YNPIDNACWKHNEKVPYIALTRTLELIEDTSARLKIIEILSNYFRSVIVLSSDDLLPSIY 92
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++APA+EG+ELG+ + +++KA+A+ GRT + +K QE+GDLG+VA+ SRS+Q
Sbjct: 93 LCLNQLAPAYEGIELGVAETNLMKAIAQCTGRTLAQIKTDVQEVGDLGIVAEGSRSNQRT 152
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M +P PLT++ V+ + IA+ G S KK ++I++L VA E +YLIR L KLRI
Sbjct: 153 MFQPAPLTVSSVYTRLKEIAQMTGSASVTKKLDKIQSLFVACRFTEARYLIRSLAGKLRI 212
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++L AL A PP I + +E A I+K + P
Sbjct: 213 GLAEQSVLQALALACTMTPPKPTFPPEILDVSKKMSNDTFKQKYDETALILKTTYCECPN 272
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y KI+P LL +G+ L N C TPGIP+ PMLA PTKGV E++ +F ++FTCE+KYDGE
Sbjct: 273 YGKIIPVLLKEGIKELPNKCKITPGIPMKPMLAHPTKGVQEVLTRFDGLKFTCEWKYDGE 332
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH EDG + IYSRN E NT K+PD++ + +V+S +LDCE VA+D +K++I
Sbjct: 333 RAQIHLAEDGKISIYSRNQENNTSKYPDIIGRFKNTQGENVKSCILDCEAVAWDNDKKQI 392
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
LPFQ LSTR RK+ + SDIKV VC++ FD+LY NG+PL+Q+ RRE L ++F+E G
Sbjct: 393 LPFQILSTRKRKDANESDIKVQVCVFMFDLLYLNGEPLVQQPFIKRRELLKENFKEVIGE 452
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
++FAT+L + ++++Q FLD +V +CEGL++KT++ +ATYE +KRS NWLKLKKDY++
Sbjct: 453 WKFATSLDTSTMEQVQDFLDESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDG 512
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
I D+LD+V I + G+GKRTG YG FLLACYD NEE+QSICKIGTGFSE L++ +
Sbjct: 513 ISDTLDVVVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSICKIGTGFSEEDLQKHTEFF 572
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ +I + + YYR+ ++ PD WFEP + E + S+
Sbjct: 573 KEYIISQTKSYYRYDSSLEPDHWFEPIQVWEIKCADLSL 611
>gi|291415245|ref|XP_002723865.1| PREDICTED: DNA ligase (ATP) 1, partial [Oryctolagus cuniculus]
Length = 757
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/567 (47%), Positives = 388/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N LR+V+ +P DL+P++Y
Sbjct: 111 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNFLRSVVALSPPDLLPILY 170
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SR +Q
Sbjct: 171 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLDIVRAEAAESGDVGLVAEYSRVTQRF 230
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L+ +LR+
Sbjct: 231 MLPPPPLTASGVFAKFRDIARLTGSASMTKKMDIIKGLFVACRHSEARFIARALRGRLRL 290
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++L AL QA PP + ++ LEE ++KQ F +P
Sbjct: 291 GLAEQSVLTALTQAVSLTPPGQAFPPAVVDAGKGKTAEARKTWLEEQGMVLKQTFCEVPD 350
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PG P+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 351 LDRIIPVLLEHGLERLPEHCKLSPGTPLRPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 410
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 411 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 470
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK+V S+I+V VC+YAFD++Y NGQ L++E L RR+ L ++F E G
Sbjct: 471 QPFQVLTTRKRKDVDPSEIQVQVCLYAFDLIYLNGQSLVREPLSRRRQLLRENFVETEGE 530
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + DL++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 531 FLFATSLDTKDLEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 590
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLACYD + E Q+ICK+GTGFS+ LEE+ SL
Sbjct: 591 VGDTLDLVVIGAYLGRGKRAGRYGGFLLACYDEDTEGLQAICKLGTGFSDEELEEQHQSL 650
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY + ++PD W +PT
Sbjct: 651 QALVLPAPRPYVQAGGAVAPDHWLDPT 677
>gi|345784854|ref|XP_003432611.1| PREDICTED: DNA ligase 1 [Canis lupus familiaris]
Length = 914
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/567 (47%), Positives = 388/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+P++Y
Sbjct: 269 YHPIDDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPILY 328
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR VK + E GD+GLVA+ SRS+Q +
Sbjct: 329 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLDSVKAEAAEKGDVGLVAENSRSTQRL 388
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P LT VF FR IA+ AG S KK + IK L VA E +++ R L +LR+
Sbjct: 389 MLPPPALTAAGVFAKFRDIARLAGSASTAKKIDVIKGLFVACRHSEARFIARALSGRLRL 448
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 449 GLAEQSVLAALAQAVSLTPPGQEFPPAVVDAGKGRTAEARKTWLEEQGMILKQTFCEVPD 508
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ +L C +PG+P+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 509 LDRIIPVLLEHGLEHLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 568
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 569 RAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 628
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V ++I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 629 QPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 688
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D D+I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 689 FVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 748
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LEE L
Sbjct: 749 VGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEHYQRL 808
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PR Y R ++PD W +P+
Sbjct: 809 QALVLPTPRSYVRVDGAVAPDHWLDPS 835
>gi|198427151|ref|XP_002124805.1| PREDICTED: similar to ligase I [Ciona intestinalis]
Length = 1060
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 279/579 (48%), Positives = 382/579 (65%), Gaps = 13/579 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACWE G++VP++ L+ F +I +GR+ +I+ N LR+V+ +P +L+ +Y
Sbjct: 415 YHPVDHACWENGKKVPYLALARTFSLIEETSGRLRTIEILSNFLRSVIALSPNELITCIY 474
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ NK+APA+EG+ELGIG+ ++KA+AEA GR + +K GDLGLVA+ SRS+Q M
Sbjct: 475 LSLNKLAPAYEGIELGIGENLLMKAVAEATGRNIAKIKVDVGNTGDLGLVAENSRSNQKM 534
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P LT+ VF + IA +G S +K + +K+LLVA CE +YL+R L KLRI
Sbjct: 535 MFTPAALTVDGVFKKLKQIAAISGGSSMSQKVSLVKSLLVACKHCEARYLMRSLGGKLRI 594
Query: 357 GLAEQTLLAALGQAA------------VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++L A+ AA + N P ++S ++E A IVK +S LP
Sbjct: 595 GLAEQSVLVAIANAAYLTPPGQDFPPAIINAGEKIPAETLKSKMDEKALIVKTTYSELPN 654
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y+ ++ +L GV L + C TPGIP+ PMLA PTKGVSE+ N+F EFTCEYKYDGE
Sbjct: 655 YDIVIKTMLEHGVDKLPDHCRLTPGIPLKPMLAHPTKGVSEVFNRFDKSEFTCEYKYDGE 714
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V IYSRN E NT K+PD++ V + K V S V+D E VA+D +K++I
Sbjct: 715 RAQIHLLEGGEVRIYSRNQENNTSKYPDIISRVPAMLKDEVTSCVIDSEAVAWDTDKKQI 774
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
LPFQ LSTR RK+ LS IKV VCIYAFD+LY NG+ L+++ R RR+ L D+F G
Sbjct: 775 LPFQVLSTRKRKDADLSTIKVQVCIYAFDLLYLNGESLVRKSFRERRKLLLDNFNVCDGQ 834
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FA + + D D+I +FL+ ++ +CEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 835 FVFAESQDTTDTDKIAEFLEESIKGNCEGLMVKTLDDDATYEIAKRSHNWLKLKKDYLDG 894
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I + G+GKR G YG FLLACYD +EE+Q+ICKIGTGFS+ L + +
Sbjct: 895 VGDTLDLVVIGGYKGKGKRVGNYGGFLLACYDEESEEYQTICKIGTGFSDQNLADHAIFF 954
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+I +P+ YYR + D WFEP + E + S+
Sbjct: 955 NQHLIDQPKSYYRLNGS-DADQWFEPVQVWEVKAADLSV 992
>gi|432911802|ref|XP_004078727.1| PREDICTED: DNA ligase 1-like [Oryzias latipes]
Length = 974
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 276/576 (47%), Positives = 385/576 (66%), Gaps = 19/576 (3%)
Query: 176 EFDPKM-------VACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTP 228
EFDP ACW+ ++VP++ ++ F+ I ++GR+ + + N+ R+V+ +P
Sbjct: 342 EFDPSRPNYHPVDHACWKHSQKVPYLAVARTFEKIEEDSGRLRNIETLSNLFRSVLLLSP 401
Query: 229 EDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAK 288
+DL+ VYL N++ PA+ G+ELG+G+ ++KA+A+A GR +K + QE GDLGLVA+
Sbjct: 402 DDLLCCVYLCLNQLGPAYLGMELGVGETVLMKAVAQATGRQLDKIKAEAQEKGDLGLVAE 461
Query: 289 ASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIR 348
+SRS+Q MM +P LT+ VF + IA +G + KK + IK L VA E +Y++R
Sbjct: 462 SSRSNQRMMFQPASLTVGSVFKKLKEIASMSGNSAMNKKIDIIKGLFVACRFSEARYIVR 521
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVK 396
L KLRIGLAEQ++L+AL QA PP + ++ +EE + I+K
Sbjct: 522 SLAGKLRIGLAEQSVLSALSQAVCLTPPGQDFPPAVIDASKGMSAESRRAWIEEKSLILK 581
Query: 397 QVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFT 456
Q + +P Y+ I+P LL +G+ L N C TPG+P+ PMLA PTKGV E++ KF + FT
Sbjct: 582 QTYCEMPNYDIILPVLLKEGIDQLPNHCKLTPGVPLRPMLAHPTKGVGEVMKKFDEAAFT 641
Query: 457 CEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVA 516
CEYKYDGERAQIH LE G V I+SRN E NT K+PD++ + ++KK SV S VLD E VA
Sbjct: 642 CEYKYDGERAQIHILESGEVRIFSRNQEDNTSKYPDIIARIPKVKKESVVSCVLDSEAVA 701
Query: 517 YDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYD 576
+D EK++I PFQ L+TR RK+V S+IKV VC+YAFD+LY NG+ L+++ L RR L D
Sbjct: 702 WDHEKKQIQPFQVLTTRKRKDVDASEIKVQVCVYAFDLLYLNGESLVRQPLCRRRALLRD 761
Query: 577 SFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLK 636
SF E G F FA ++ S D I +FL+ +V SCEGL++KT+++DATYE +KRS NWLK
Sbjct: 762 SFMEVEGEFMFARSIDSDSTDAIAEFLEQSVRDSCEGLMVKTLEKDATYEIAKRSHNWLK 821
Query: 637 LKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
LKKDY++ +GD++DL I A+ G+GKRTG YG FLLACYD NEEFQS+CKIGTGF +
Sbjct: 822 LKKDYLDGVGDTVDLCVIGAYLGKGKRTGTYGGFLLACYDDENEEFQSVCKIGTGFKDED 881
Query: 697 LEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
LE+ L+ ++PKPR YYR + PDVW + +
Sbjct: 882 LEQHYKFLKEHILPKPRAYYRVDQSAEPDVWLDAVQ 917
>gi|355699355|gb|AES01100.1| ligase I, DNA, ATP-dependent [Mustela putorius furo]
Length = 919
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/572 (47%), Positives = 388/572 (67%), Gaps = 17/572 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGR-----ILITDIVCNMLRTVMETTPEDL 231
+ P ACW+ G++VP++ ++ F+ I +GR + + + + N+LR+V+ +P DL
Sbjct: 269 YHPIDDACWKPGQKVPYLAVARTFEKIEEGSGREVSARLRMVETLSNLLRSVVALSPPDL 328
Query: 232 VPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASR 291
+P++YL+ N++ P +GLELG+GD ++KA+A+A GR +K + E GD+GLVA++SR
Sbjct: 329 LPILYLSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIKAEAAEKGDVGLVAESSR 388
Query: 292 SSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQ 351
S+Q ++ P LT VF FR IA+ AG S KK + IK L VA E +Y+ R L
Sbjct: 389 STQRLVLPPPALTAAGVFTKFRDIARLAGSASTAKKMDVIKGLFVACRHSEARYIARALS 448
Query: 352 SKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP------------LEEAAKIVKQVF 399
+LR+GLAEQ++LAAL QA + PP I LEE I+KQ F
Sbjct: 449 GRLRLGLAEQSVLAALAQAVSLTPPGQEFPPGIVDAGKGRTAEARKMWLEEQGMILKQTF 508
Query: 400 SVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
+P ++I+P LL G+ +L C +PG+P+ PMLA PT+GVSE++ +F++ FTCEY
Sbjct: 509 CEVPDLDRIIPVLLEHGLEHLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEY 568
Query: 460 KYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR 519
KYDG+RAQIH LE G V+I+SRN E NT K+PD++ + ++K PSV SF+LD E VA+DR
Sbjct: 569 KYDGQRAQIHVLEGGEVKIFSRNQEDNTSKYPDIISRIPKIKLPSVTSFILDTEAVAWDR 628
Query: 520 EKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFE 579
EK++I PFQ L+TR RK V ++I+V VC+YAFD++Y NGQ L++E L RR+ L ++F
Sbjct: 629 EKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGQSLVREPLSRRRQLLRENFV 688
Query: 580 EEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKK 639
+ G F FAT+L + D ++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKK
Sbjct: 689 QTEGEFVFATSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKK 748
Query: 640 DYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
DY++ +GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LEE
Sbjct: 749 DYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEE 808
Query: 700 RSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
L++ V+P PRPY R ++PD W +P+
Sbjct: 809 HHHRLQALVLPSPRPYVRVDGAVAPDHWLDPS 840
>gi|380029885|ref|XP_003698595.1| PREDICTED: DNA ligase 1-like, partial [Apis florea]
Length = 672
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 268/579 (46%), Positives = 393/579 (67%), Gaps = 12/579 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
++P A W+ E+VP+I L+ ++I + + R+ I +I+ N R+V+ + +DL+P +Y
Sbjct: 27 YNPIDDAFWKHNEKVPYIALTRTLELIEDTSARLKIIEILSNYFRSVIVLSSDDLLPSIY 86
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++APA+EG+ELG+ + +++KA+A+ GRT + +K QE+GDLG+VA+ SRS+Q
Sbjct: 87 LCLNQLAPAYEGIELGVAETNLMKAIAQCTGRTLAQIKTDVQEVGDLGIVAEGSRSNQRT 146
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M +P PLT++ V+ + IA+ G S KK ++I++L VA E +YLIR L KLRI
Sbjct: 147 MFQPAPLTVSSVYIRLKEIAQMTGSASLTKKLDKIQSLFVACRFTEARYLIRSLAGKLRI 206
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++L AL A PP I + +E A I+K + P
Sbjct: 207 GLAEQSVLQALALACTMTPPKPTFPPEILDVSKKMSNDSFKQKYDETALILKTTYCECPN 266
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y+KI+P LL +G+ L N C TPGIP+ PMLA PTKGV E++ +F ++FTCE+KYDGE
Sbjct: 267 YDKIIPVLLKEGIKELPNKCKITPGIPMKPMLAHPTKGVQEVLTRFDGLKFTCEWKYDGE 326
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH+ EDG + IYSRN E NT K+PD++ + +V+S +LDCE VA+D +K++I
Sbjct: 327 RAQIHFAEDGKISIYSRNQENNTSKYPDIIGRFKNTQGENVKSCILDCEAVAWDNDKKQI 386
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
LPFQ LSTR RK+ + SDIKV VC++ FD+LY NG+PL+Q+ RRE L ++F+E G
Sbjct: 387 LPFQVLSTRKRKDANESDIKVQVCVFMFDLLYLNGEPLVQQPFIKRRELLKENFKEVIGE 446
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
++FAT+L + ++++Q FLD +V +CEGL++KT++ +ATYE +KRS NWLKLKKDY++
Sbjct: 447 WKFATSLDTSTMEQVQDFLDESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDG 506
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ D+LD+V I + G+GKRTG YG FLLACYD NEE+QSICKIGTGFSE L++ +
Sbjct: 507 VSDTLDVVVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSICKIGTGFSEEDLQKHTEFF 566
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ +I + + YYR+ ++ PD WFEP + E + S+
Sbjct: 567 KEYIISQTKSYYRYDSSLEPDHWFEPIQVWEIKCADLSL 605
>gi|348520056|ref|XP_003447545.1| PREDICTED: DNA ligase 1-like [Oreochromis niloticus]
Length = 1044
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 273/566 (48%), Positives = 385/566 (68%), Gaps = 12/566 (2%)
Query: 176 EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
++ P ACW++G++VP++ ++ F+ I ++GR+ + + N+ R+V+ +P+DL+ V
Sbjct: 400 KYHPVDHACWKQGQKVPYLAVARTFERIEEDSGRLRNIETLSNLFRSVLLLSPDDLLCCV 459
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL N++ PA+ G+ELG+G+ ++KA+A+A GR +K + QE GDLGLVA++SRS+Q
Sbjct: 460 YLCLNQLGPAYLGMELGVGETVLMKAVAQATGRQLDKIKAEAQEKGDLGLVAESSRSNQR 519
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
MM +P LT VF + IA +G + KK + IK L VA E +Y++R L KLR
Sbjct: 520 MMFQPASLTAGGVFRKLKEIASMSGNSAMNKKIDIIKGLFVACRFSEARYIVRSLAGKLR 579
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLP 403
IGLAEQ++L+AL QA PP + ++ +EE + I+KQ + +P
Sbjct: 580 IGLAEQSVLSALSQAVCLTPPGQGFPPAVIDAGKGMSAESRRAWIEEKSLILKQTYCEMP 639
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
Y+ ++P LL +G+ L N C TPG+P+ PMLA PTKGV E++ KF + FTCEYKYDG
Sbjct: 640 NYDVLIPVLLKEGIDQLPNHCKLTPGVPLRPMLAHPTKGVGEVMKKFDEAAFTCEYKYDG 699
Query: 464 ERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQK 523
ERAQIH LE G V I+SRN E NT K+PD++ + ++KK SV S VLD E VA+D EK++
Sbjct: 700 ERAQIHILESGEVRIFSRNQEDNTSKYPDIISRIPKVKKDSVVSCVLDTEAVAWDHEKKQ 759
Query: 524 ILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG 583
I PFQ L+TR RK+V S+IKV VC+YAFD+LY NG+ L+++ L RR L +SF E G
Sbjct: 760 IQPFQVLTTRKRKDVDASEIKVQVCVYAFDLLYLNGESLVRQPLCRRRALLRESFSEVEG 819
Query: 584 FFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE 643
F FA ++ S + D I +FL+ +V SCEGL++KT+++DATYE +KRS NWLKLKKDY+E
Sbjct: 820 EFVFARSIDSDNTDTIAEFLEQSVRDSCEGLMVKTLEKDATYEIAKRSHNWLKLKKDYLE 879
Query: 644 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSS 703
+GD++DL I A+ G+GKRTG YG FLLACYD NEEFQS+CKIGTGF + LE+
Sbjct: 880 GVGDTVDLCVIGAYLGKGKRTGTYGGFLLACYDEENEEFQSVCKIGTGFKDEDLEQHYKF 939
Query: 704 LRSKVIPKPRPYYRFADTISPDVWFE 729
L+ ++PKPR YYR + PDVW +
Sbjct: 940 LKEHILPKPRAYYRVDQSAEPDVWLD 965
>gi|196017042|ref|XP_002118368.1| hypothetical protein TRIADDRAFT_34086 [Trichoplax adhaerens]
gi|190579027|gb|EDV19135.1| hypothetical protein TRIADDRAFT_34086 [Trichoplax adhaerens]
Length = 707
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/579 (46%), Positives = 381/579 (65%), Gaps = 12/579 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW +RVP+I +S FD I + R+ I + N R+V+ TPEDL VY
Sbjct: 63 YHPIRDACWALKQRVPYIAISRTFDEIEATSARLKIISTLRNFFRSVIILTPEDLTFCVY 122
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
+ NK+ PA+EGLELGIG+ ++KA+A+A GR+ + +K E GD+G+VA+ SRS+Q
Sbjct: 123 MCLNKVGPAYEGLELGIGETILMKAIAQATGRSLASIKADVTERGDVGIVAETSRSNQRT 182
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P LT+ VF + IAK G S +K ++IK + VA E ++L+R L KLRI
Sbjct: 183 MFTPAKLTVRSVFSKLKDIAKMTGTASMNRKSDKIKEMFVACRHSEARFLMRSLGGKLRI 242
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++L AL A +Y + PP+I + L+ A ++K P
Sbjct: 243 GLAEQSVLVALAHATIYTPSNQVYPPHIIDASKGKAVDAFKKELDNGALLLKDAHCQCPN 302
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y+ ++PALL G+ LS C +PG+P+ PMLA PTKG+ E++ + +D F CEYKYDGE
Sbjct: 303 YDLVIPALLKYGIHELSEHCKLSPGVPLKPMLAHPTKGIHEVLKRLEDKSFACEYKYDGE 362
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH L++G V+IYSRN E NT K+PD+++ + +K + SF++D E VA+D+EKQ+I
Sbjct: 363 RAQIHLLDNGEVQIYSRNCENNTTKYPDIIMRMPEVKLDHINSFIIDTEAVAWDKEKQQI 422
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
LPFQ LSTR RK+V ++IKV VC+YAFD+LY NG+ L++E RR L SF+E G
Sbjct: 423 LPFQILSTRKRKDVDANEIKVQVCVYAFDMLYCNGKSLVKETFEKRRSVLRSSFKEVEGE 482
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FA + S D +EI +FLD ++ +CEGL++KT+ +ATYE +KRS +WLKLKKDY+E
Sbjct: 483 FVFAKSRISADTEEIGEFLDESIKGNCEGLMVKTLQIEATYEIAKRSHSWLKLKKDYLEG 542
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I + G+GKRTG YG FLLACY+ +EEFQSICKIGTGF + LE+ ++ L
Sbjct: 543 VGDTLDLVVIGGYLGKGKRTGTYGGFLLACYNDEDEEFQSICKIGTGFKDVELEQHTNFL 602
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ + I KP+ YYR+ ++ PD WFE + E + SI
Sbjct: 603 KQQTIEKPKSYYRYDSSVQPDHWFEAVQVWEVKVADLSI 641
>gi|328772647|gb|EGF82685.1| hypothetical protein BATDEDRAFT_9401 [Batrachochytrium
dendrobatidis JAM81]
Length = 621
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 278/544 (51%), Positives = 378/544 (69%), Gaps = 10/544 (1%)
Query: 209 RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR 268
R+ I I+ N R V+ +P+ L+ VYL N+I P +EG ELGIG++ +IKALA A GR
Sbjct: 11 RLEIQSILSNFFREVIVASPDQLIECVYLCINRICPEYEGKELGIGESLLIKALANASGR 70
Query: 269 TESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKK 328
+K + ++GDLG VA+ S+ Q + KP PLT+T VF T + I +G+ SQ++K
Sbjct: 71 DAKSIKAEIDQVGDLGSVAQ-SKGYQKTLFKPKPLTVTSVFKTLKEICNISGQSSQQRKI 129
Query: 329 NRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHS--KPPPNIQS 386
N I+ +LV+ E +YLIR L+ KLRIGLAEQT+L +L A+ NE + +
Sbjct: 130 NIIQKMLVSCQGSEAKYLIRSLEGKLRIGLAEQTVLTSLAHASALNESTTIKMSTEKKAA 189
Query: 387 PLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEI 446
L +A ++K V+S +P Y+ I+P LL G LS C TPGIP+ PMLA PTK +SE+
Sbjct: 190 LLADATVMIKSVYSAIPSYDAIIPVLLKYGFKELSTHCHMTPGIPMKPMLAHPTKSLSEV 249
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKK---- 502
+++F M FTCEYKYDGERAQIH LEDG V IYSRN+E +GK+P+V+ + ++
Sbjct: 250 LDRFDGMAFTCEYKYDGERAQIHRLEDGQVIIYSRNSENLSGKYPEVLERIPKVWHFYDC 309
Query: 503 -PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQP 561
+++SFVLDCE VA+D +K+ ILPFQ LSTR RK+V D++V VCI+AFD+LY NGQ
Sbjct: 310 MENIKSFVLDCEAVAWDVQKECILPFQVLSTRKRKDVKSDDVQVQVCIFAFDLLYLNGQS 369
Query: 562 LLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR 621
++ E L+ RRE L+++F E G FQFA +TS +DEIQ FLD ++ +CEGL++KT+++
Sbjct: 370 MITETLKRRRELLHENFVEVDGQFQFAKHMTSNSVDEIQIFLDDSIVGNCEGLMVKTLEK 429
Query: 622 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEE 681
+A+YEPSKRS NWLK+KKDY+ +GDSLDLV I F GRGKRTG YG +LLAC+D + EE
Sbjct: 430 EASYEPSKRSRNWLKVKKDYVNGLGDSLDLVVIGGFIGRGKRTGWYGGYLLACFDPDREE 489
Query: 682 FQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD--TISPDVWFEPTERPETSNS 739
+Q+ICKIGTGFSE L E++ S +S +I KP+PYYRF D + PDVWFEPT+ E +
Sbjct: 490 YQTICKIGTGFSEEALAEQAESFKSHIISKPKPYYRFGDGPNVRPDVWFEPTQVWEIKAA 549
Query: 740 PASI 743
SI
Sbjct: 550 DLSI 553
>gi|444730652|gb|ELW71027.1| DNA ligase 1 [Tupaia chinensis]
Length = 960
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/566 (47%), Positives = 388/566 (68%), Gaps = 12/566 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 314 YHPIEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPLDLLPVLY 373
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++AP +GLELG+GDA +IKA+A+A GR V+ + E GDLGLVA+ SRS+Q +
Sbjct: 374 LSLNRLAPLQQGLELGVGDAVLIKAVAQATGRQLESVRAEVAEKGDLGLVAENSRSTQRL 433
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + V FR IA+ +G S +K + IK L VA E +++ R L +LR+
Sbjct: 434 MLPPPPLTTSGVLAKFRDIARLSGGTSMARKVDIIKGLFVACRHSEARFIARSLSGRLRL 493
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LE+ I+KQ F +P
Sbjct: 494 GLAEQSVLAALAQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEKQGMILKQTFCEVPD 553
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++IVP LL G+ L C +PG+ + PMLA PT+G+S+++ +F++ FTCEYKYDG+
Sbjct: 554 LDRIVPVLLEHGLERLPEHCRLSPGVALKPMLASPTRGISQVLKRFEEAAFTCEYKYDGQ 613
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K SV SF+LD E VA+D+EK++I
Sbjct: 614 RAQIHMLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLSSVTSFILDTEAVAWDQEKKQI 673
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
LPFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 674 LPFQVLTTRKRKEVDASEIQVQVCVYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 733
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D ++I +FL+ +V SCEGL++KT+D +ATYE +KRS NWLKLKKDY++
Sbjct: 734 FVFATSLDTKDTEQIDEFLEQSVKDSCEGLMVKTLDVNATYEIAKRSHNWLKLKKDYLDG 793
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD++ EE Q+ICK+GTGF + LEE+ +L
Sbjct: 794 VGDTLDLVVIGAYLGRGKRAGQYGGFLLASYDADTEELQAICKLGTGFCDRELEEQHENL 853
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEP 730
+ V+P PR Y R +PD W EP
Sbjct: 854 QDLVLPTPRSYVRVGGAAAPDHWLEP 879
>gi|428177538|gb|EKX46417.1| hypothetical protein GUITHDRAFT_157730 [Guillardia theta CCMP2712]
Length = 637
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 286/575 (49%), Positives = 389/575 (67%), Gaps = 16/575 (2%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L+ +F+ + E+ R+ I +V + LR+V+ETTPEDL+ VYL NK+AP
Sbjct: 9 WKPGQPVPYSHLATMFEKVEKESKRLEIISLVTDCLRSVIETTPEDLLFCVYLCVNKLAP 68
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
AHEG+ELGIGD + KALAEA GR ++ Y ++GDLG VA SRS+Q +M LT
Sbjct: 69 AHEGVELGIGDMILKKALAEATGRQVKDIQSDYDKVGDLGTVAMKSRSTQRVMFAAKSLT 128
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ + + IAK GKDS KK++IK+LLVAA E Q+++R LQ K+RIGLAEQT+L
Sbjct: 129 VQTLHKSLLQIAKMTGKDSGTLKKDKIKSLLVAAKGIETQFIVRHLQGKMRIGLAEQTVL 188
Query: 365 AALGQA-AVYNEQHSKPPPNIQSPLE------------EAAKIVKQVFSVLPVYEKIVPA 411
AL + A+ Q +KP I + +AA+ +++V+S LP Y+KIVP
Sbjct: 189 VALAHSIALSVPQGTKPNKQILEKVSCPCFLNQLIDSLQAAETLREVYSQLPCYDKIVPV 248
Query: 412 LLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL 471
LL + + NL C PGIP+ PMLA PTKGVSE++++F D FTCEYKYDGER QIH
Sbjct: 249 LLKEPINNLPLNCYLQPGIPVHPMLAHPTKGVSEVLDRFADQTFTCEYKYDGERGQIHMT 308
Query: 472 EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
DG+V I+SRN+E NT K+PD++ + ++ K +SF+LD E+VAYDRE +KILPFQ LS
Sbjct: 309 PDGTVRIFSRNSEDNTSKYPDLIALMPKVIKEQTKSFILDAEVVAYDRETKKILPFQVLS 368
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
TR RK+ + I V VC++AFDILY NG PL++ RRE L +F E G F FA +
Sbjct: 369 TRKRKDANEDTITVQVCLFAFDILYYNGDPLIKRSFHERRELLKSTFTEVEGSFAFAKSR 428
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD-ATYEPSKRSLNWLKLKKDYIESIGDSLD 650
+ D +EI FL+ AV SCEGL++KT+ D +TYEP++RS WLK+KKDYI+ + DSLD
Sbjct: 429 DASDTEEILAFLNDAVADSCEGLMVKTLFGDSSTYEPAQRSHKWLKVKKDYIDGMTDSLD 488
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP 710
LVPI AF G+GKRTGVYGAFLLACY+ E+F++ICKIGTG S+ L+E + +I
Sbjct: 489 LVPIGAFFGKGKRTGVYGAFLLACYNEETEDFEAICKIGTGISDTQLKEFYDAFEPIIIS 548
Query: 711 KPRPYYRFADT--ISPDVWFEPTERPETSNSPASI 743
+P+ YY++ D+ + P+VWFEP E + + SI
Sbjct: 549 EPKSYYQYDDSPGLLPNVWFEPKIVWEVAAADLSI 583
>gi|395862645|ref|XP_003803550.1| PREDICTED: DNA ligase 1 [Otolemur garnettii]
Length = 898
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 273/567 (48%), Positives = 386/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ I + + N+LR+V+ +P DL+PV+Y
Sbjct: 253 YHPIEDACWKPGQKVPYLAVARTFEKIEEVSARLRIVETLSNLLRSVVALSPPDLLPVLY 312
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA++SRS+Q +
Sbjct: 313 LSLNTLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAESSRSTQRL 372
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF F IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 373 MLPPPPLTASGVFSKFLDIARLTGSASTTKKMDIIKGLFVACRHSEARFISRSLSGRLRL 432
Query: 357 GLAEQTLLAALGQA------------AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA AV + K +S LE+ I+K+ F +P
Sbjct: 433 GLAEQSVLAALAQAVSLTPPGQEFPLAVVDAGKGKTAEARKSWLEDQVMILKRTFCEVPD 492
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++IVP LL G+ +L C +PGIP+ PMLA PT+ VSE++ +F + FTCEYKYDG+
Sbjct: 493 LDRIVPVLLEHGLEHLPEHCRLSPGIPLKPMLAHPTRSVSEVLKRFDEAAFTCEYKYDGQ 552
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 553 RAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 612
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NGQ L++E L RR+ L ++F E G
Sbjct: 613 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGQSLVREPLSRRRQLLRENFVETEGE 672
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D ++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 673 FVFATSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 732
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE L
Sbjct: 733 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDQDSEELQAICKLGTGFSDEELEEHYQKL 792
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
+ V+P PR Y R ++PD W +P+
Sbjct: 793 QDLVLPAPRSYVRIDGAVAPDHWLDPS 819
>gi|307187908|gb|EFN72821.1| DNA ligase 1 [Camponotus floridanus]
Length = 870
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 261/568 (45%), Positives = 376/568 (66%), Gaps = 12/568 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW++G++ P+ + ++I + R+ I +I+ N R+V+ +P DL+P VY
Sbjct: 225 YHPINNACWKRGDKTPYSAFTRTLELIEETSARLKIIEILSNYFRSVIVLSPMDLLPSVY 284
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++APA+EG+ELG+ D +++KA+A+ GRT + +K QE+GDLG+VA+ SRS+Q
Sbjct: 285 LCLNQLAPAYEGIELGVADTNLMKAIAQCTGRTLAQIKADVQEVGDLGIVAEGSRSNQRT 344
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M +P PLT+ V+ + +A+ G S KK ++I+ L VA + E +YLIR L KLRI
Sbjct: 345 MFQPAPLTVLVVYSKLKEVAQMTGHASLTKKLDKIQTLFVACRNTEARYLIRSLAGKLRI 404
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++L AL A PP I + +E A I+K + P
Sbjct: 405 GLAEQSVLQALALACAMTPPQQSYPPEILNANKNLSSDRFKQKYDEIALILKTTYCECPN 464
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y I+P LL DG+ L + C TPGIP+ PMLA PTKG+ E++ +F+ ++FTCE+KYDGE
Sbjct: 465 YNLIIPVLLEDGINGLPSKCKLTPGIPLKPMLAHPTKGIQEVLTRFEGLKFTCEWKYDGE 524
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH ++G + IYSRN E NT K+PD++ + V++ +LDCE VA+D E+++I
Sbjct: 525 RAQIHVADNGHINIYSRNQENNTSKYPDIIKRFKNTRGDLVKNCILDCEAVAWDNEQKQI 584
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
LPFQ LSTR RK+ + DIKV VC++ FD+LY N +PL++E RRE L F+E G
Sbjct: 585 LPFQVLSTRKRKDANEKDIKVQVCVFMFDLLYLNDEPLVKESFAKRRELLKQHFKEIEGE 644
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
++FA ++ + ++E+Q FLD +V +CEGL++KT++ +ATYE +KRS NWLKLKKDY++
Sbjct: 645 WKFANSMDTTTMEEVQIFLDESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDG 704
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LD+V I + G+GKRTG YG FLLACYD NEE+QSICKIGTGF E LE +
Sbjct: 705 VGDTLDVVVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSICKIGTGFKEEDLENHTKFF 764
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTE 732
+ VI + + YYRF + PD WFEP +
Sbjct: 765 KDHVISQTKSYYRFDSSHEPDHWFEPVQ 792
>gi|332022772|gb|EGI63045.1| DNA ligase 1 [Acromyrmex echinatior]
Length = 914
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/622 (43%), Positives = 400/622 (64%), Gaps = 20/622 (3%)
Query: 142 PSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGE--------FDPKMVACWEKGERVPF 193
P+P K+ V + ++ + K + V K A + + P ACW++G++ P+
Sbjct: 226 PTPNKKAKKVPNFFMSKQKGDAKGDKVNNGKSANQSYNPSASVYHPIDDACWKRGDKTPY 285
Query: 194 IFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGI 253
+ ++I + R+ I +I+ N R+V+ +PEDL+P VYL N++APA+EG+E GI
Sbjct: 286 SAFARTLEIIEETSARLKIIEILSNYFRSVIVLSPEDLLPSVYLCLNQLAPAYEGVEFGI 345
Query: 254 GDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFR 313
D +++KA+A+ GRT + ++ QE+GDLG++A+ S+S+Q M +P PLT+ V+
Sbjct: 346 ADTNLMKAIAQCTGRTLAQIRADVQEVGDLGIIAENSKSNQRTMFQPAPLTVPNVYSRLM 405
Query: 314 LIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY 373
IA+ G S KK ++I+ L VA + E +YL+RLL KLRIGLAEQ++L AL A
Sbjct: 406 EIAQMTGHASLSKKLDKIQTLFVACRNTEARYLVRLLAGKLRIGLAEQSVLQALALACAM 465
Query: 374 NEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLS 421
K PP I + +E A I+K + P Y I+P LL DG+ L
Sbjct: 466 TPPEQKYPPEILNASKKISSDRFKEKYDEIALILKTTYCECPNYNLIIPVLLEDGINTLP 525
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
+ C TPGIP+ PMLA PTKGV E++ +F+ ++FTCE+KYDGERAQIH ++G ++IYSR
Sbjct: 526 SKCKLTPGIPLKPMLAHPTKGVQEVLTRFEGLKFTCEWKYDGERAQIHVADNGQIKIYSR 585
Query: 482 NAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLS 541
N E NT K+PD++ + V++ +LDCE VA+D EK++ILPFQ LSTR RK+ +
Sbjct: 586 NQEDNTTKYPDIIKRFKNSRGDEVKNCILDCEAVAWDNEKKQILPFQILSTRKRKDANEE 645
Query: 542 DIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
DIKV VC++ FD+LY N +PL++E RRE L F+E G ++FA +L + ++E++
Sbjct: 646 DIKVQVCVFMFDLLYLNDEPLVKEPFVKRRELLKQHFKEVEGEWKFANSLDASTMEEVEV 705
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
FLD +V +CEGL++KT++++ATYE +KRS NWLKLKKDY++ +GD+LD+V I + G+G
Sbjct: 706 FLDESVKGNCEGLMVKTLEKEATYEIAKRSRNWLKLKKDYLDGVGDTLDVVVIGGYIGKG 765
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT 721
KRTG YG FLLACYD NEE+QSICKIGTGF E LE + + ++P+ + YYRF +
Sbjct: 766 KRTGTYGGFLLACYDLENEEYQSICKIGTGFKEDDLENHTKFFKDHIVPQVKSYYRFDSS 825
Query: 722 ISPDVWFEPTERPETSNSPASI 743
PD WFEP + E + S+
Sbjct: 826 HEPDHWFEPVQVWEIKCADLSL 847
>gi|282165835|ref|NP_001164142.1| DNA ligase [Tribolium castaneum]
Length = 756
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 289/640 (45%), Positives = 413/640 (64%), Gaps = 38/640 (5%)
Query: 135 KESQPTPPSPKKR-KVNVNSVSAKEKIAELKSNIV--LLKKKAGEFD----------PKM 181
K++ P+ SP+K K N +V K+A V LL K +GE D P
Sbjct: 56 KKACPSSASPEKSDKENKKNVEKSPKVASPSQTPVKSLLAKDSGENDSYNPNVAKYHPLE 115
Query: 182 VACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANK 241
A W +GERVP+I L+ + I + + R+ I +I+ N R+V+ +P+DL+P +YL NK
Sbjct: 116 DATWRQGERVPYIALTRTLEEIGSISSRLKIIEILSNFFRSVILLSPDDLLPSLYLCLNK 175
Query: 242 IAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD 301
+ PA+EGLELG+ + S++KA+A + GR+ S +K QE+GDLGLVA+ S+++Q M+ +P
Sbjct: 176 LGPAYEGLELGVAETSLMKAIASSTGRSMSQIKTDCQELGDLGLVAEQSKTNQRMLFQPA 235
Query: 302 PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQ 361
LT+ VF+ + IAK G SQ KK +I+ + VA E ++LIR L KLRIGLAEQ
Sbjct: 236 RLTVFGVFEKLKEIAKLTGHASQTKKIEKIQTMFVACKKSEARFLIRSLTGKLRIGLAEQ 295
Query: 362 TLLAALGQAAVYNEQHSKPPPNIQSPL------------------EEAAKIVKQVFSVLP 403
++L AL A N PPN +SP+ ++ A I+K + P
Sbjct: 296 SVLQALALACTLN------PPNSKSPVKSVNVAKKIASDDFKENYDKLALILKTTYCECP 349
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
Y+ I+P LL+DG+ L C TPGIP+ PMLA PTKG+ E++++F ++FTCE+KYDG
Sbjct: 350 NYDMIIPRLLSDGIEKLPEYCKLTPGIPLKPMLAHPTKGIQEVLHRFDGLKFTCEWKYDG 409
Query: 464 ERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQK 523
ERAQIH + V I+SRN E NT K+PD++ + + K V+S VLDCE VA+DRE++
Sbjct: 410 ERAQIH-ISGKDVFIFSRNQENNTSKYPDIISRIDKCKDEKVQSCVLDCEAVAWDRERKV 468
Query: 524 ILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG 583
ILPFQ LSTR RK+ S IKV VC++ FD+LY NG+ L+++ RR L + F+E G
Sbjct: 469 ILPFQILSTRKRKDADESSIKVQVCVFMFDLLYLNGESLVKKPFIERRNLLKEHFKEVEG 528
Query: 584 FFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE 643
+ F T+L + ++E+Q+FL+ ++ +CEGL++KT++++ATYE +KRS NWLKLKKDY++
Sbjct: 529 EWCFVTSLDTNTMEEVQEFLEESIKGNCEGLMVKTLEKEATYEIAKRSHNWLKLKKDYLD 588
Query: 644 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSS 703
S GD+LDLV I + G+GKRTG YG FLLACYD +EEFQSICKIGTGFS+ L++ S
Sbjct: 589 SCGDTLDLVVIGGYLGKGKRTGTYGGFLLACYDQESEEFQSICKIGTGFSDEALQQHSEF 648
Query: 704 LRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
L++ VI P+PYYRF + PD WF+ + E + S+
Sbjct: 649 LKNHVIQGPKPYYRFDGSHEPDHWFDSVQVWEVKCADLSL 688
>gi|320170916|gb|EFW47815.1| ligase I [Capsaspora owczarzaki ATCC 30864]
Length = 981
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 280/580 (48%), Positives = 386/580 (66%), Gaps = 13/580 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P A W++ E VP+ L+ F+ I + T R+ I + + N R+V+ +P DLV VY
Sbjct: 336 YHPIKDAFWKQDELVPYAALAKTFEAIGSTTKRLKIIETLANFFRSVIILSPNDLVRCVY 395
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
+ N+IAP +EGLELGIG++ ++KA+A+A GR +K + GDLG+VAK SRSSQ
Sbjct: 396 MCTNRIAPPYEGLELGIGESLLMKAIADATGRDMRRIKADAEAKGDLGIVAKESRSSQKT 455
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M LT+ VF R IA G KK +IKA+LVA + E +LIR L KLRI
Sbjct: 456 MFAHKTLTVEAVFKNLREIASMTGHSVMSKKIVKIKAMLVACKESESMFLIRSLAGKLRI 515
Query: 357 GLAEQTLLAAL-------------GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLP 403
GLAEQ++LAAL +A V + S ++ + LE A VK V+ LP
Sbjct: 516 GLAEQSVLAALARAILLTPPRINPAKAQVVDASKSMSEADLAAELERATLAVKTVYCELP 575
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
Y+ I+P LL G+ L C+ TPGIP+ PMLA PTKGVSE++ +F+ M FTCEYKYDG
Sbjct: 576 NYDVIIPTLLEVGLEELQVRCTLTPGIPLKPMLAHPTKGVSEVLKRFEGMTFTCEYKYDG 635
Query: 464 ERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQK 523
ERAQIH ED V IYSRN+E NT K+PD++ + + K +V+S++LDCE VA+D EK++
Sbjct: 636 ERAQIHMKEDRVVNIYSRNSENNTSKYPDIIERIPKSLKDTVKSYILDCESVAWDTEKKQ 695
Query: 524 ILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG 583
ILPFQ LSTR RK+ +++IKV VC++AFD+LY NG+ L+++ L+ RRE L + F E G
Sbjct: 696 ILPFQVLSTRKRKDADVAEIKVQVCLFAFDLLYLNGESLVKQPLKRRRELLREHFAEIEG 755
Query: 584 FFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE 643
FAT++ + ++I++FLD ++ A CEGL++KT++++ATYE +KRS NWLKLKKDY++
Sbjct: 756 EIMFATSMDGTNTEQIEEFLDQSIKAGCEGLMVKTLEQEATYEIAKRSHNWLKLKKDYLD 815
Query: 644 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSS 703
+GD+LDLV I + G+GKRTG YG FLLACYD NEE+QSICKIGTGFS+ L+ S+
Sbjct: 816 GVGDTLDLVVIGGYRGKGKRTGFYGGFLLACYDEENEEYQSICKIGTGFSDEDLQRHSTF 875
Query: 704 LRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ VI P+ YYR DT++PD WF+ + E + SI
Sbjct: 876 FKDHVISGPKSYYRADDTLAPDDWFDTVQVWEVKAADLSI 915
>gi|328871756|gb|EGG20126.1| DNA ligase I [Dictyostelium fasciculatum]
Length = 929
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 279/614 (45%), Positives = 399/614 (64%), Gaps = 20/614 (3%)
Query: 146 KRKVNVNS-VSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMIS 204
K+K+ V V K +L+ + L K + P A W+KG VP++ L+ F++I
Sbjct: 259 KKKIFVKKPVKQKSTAKQLEQELTNLSK----YHPITDAQWKKGLPVPYMALAKTFELIE 314
Query: 205 NETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAE 264
+ R+LI + + N+ R++M TP DL+ +Y++ NKI P++ G ELGIG++ ++KA+AE
Sbjct: 315 GTSRRLLIIEHLTNLFRSIMALTPGDLINTIYMSINKIGPSYGGKELGIGESILMKAVAE 374
Query: 265 ACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
+ GRT +K++ + +GDLG++A++SR +Q+MM P PLTI VF F IA G SQ
Sbjct: 375 STGRTMEFIKQELKTVGDLGIIAQSSRMTQTMMFAPPPLTIQGVFKIFSQIADMTGNSSQ 434
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV------------ 372
KKK+ I LLV+ + E Y+IR LQ KLRIGLAE+++L AL +A V
Sbjct: 435 NKKKDLITKLLVSCKESEALYIIRSLQGKLRIGLAERSVLIALTRAMVISPPALIASEPN 494
Query: 373 --YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT-DGVWNLSNTCSFTPG 429
+ + K S ++ A V + +S LP Y+ +VP L+ DGV + TC G
Sbjct: 495 GKLDTRKGKTTEEFASVIDAAVAKVTRAYSQLPNYDLLVPRLIVADGVDTILETCRLMAG 554
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PMLA+PT G+++++++FQ+MEFTCE+KYDGERAQIH EDG + IY+RN E TGK
Sbjct: 555 IPVKPMLAQPTTGITQVLDRFQEMEFTCEFKYDGERAQIHLTEDGKISIYTRNLEDYTGK 614
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PD++ V R V SF+LDCE VAYD KIL FQ LS+R RK VSL IK+ VC+
Sbjct: 615 YPDIIANVKRFIGEGVTSFILDCEAVAYDPTNNKILSFQILSSRPRKGVSLDQIKIPVCV 674
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+AFD+LY NG+ L+ E RRE LY +F+E PG +A D+++IQ +L A+D
Sbjct: 675 FAFDLLYLNGKSLIDEPFYKRREVLYANFKETPGALTYAKHANISDVNDIQLYLQEAIDG 734
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
+CEGL++KT+ + YEPSKRS NWLK+KKDY+ + DS+D+VPI A++G+GKRTGVYGA
Sbjct: 735 NCEGLMVKTLKEQSIYEPSKRSYNWLKIKKDYMAGMTDSVDVVPIGAWYGKGKRTGVYGA 794
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
+LLACYD +NE+FQ++CKIGTGFS+ L+E + L +V + Y +D + PDVWF
Sbjct: 795 YLLACYDDDNEDFQTLCKIGTGFSDEQLKEFTEILAPQVTNSCKNTYIVSDNLKPDVWFN 854
Query: 730 PTERPETSNSPASI 743
P++ E + SI
Sbjct: 855 PSQVWEVLAADLSI 868
>gi|156376850|ref|XP_001630571.1| predicted protein [Nematostella vectensis]
gi|156217595|gb|EDO38508.1| predicted protein [Nematostella vectensis]
Length = 609
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/541 (50%), Positives = 366/541 (67%), Gaps = 12/541 (2%)
Query: 215 IVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVK 274
I+ N R+V+ TP DL+P VYL NK+APA+EG+ELGIGD ++KA++EA G+ S +K
Sbjct: 3 ILSNFFRSVIALTPNDLLPCVYLCLNKLAPAYEGIELGIGDHILMKAVSEATGKILSQIK 62
Query: 275 KQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKAL 334
+ GDLGLVA+ASRS+Q M P LT V+ + IA G S KK + IK +
Sbjct: 63 ADLADKGDLGLVAEASRSNQRTMFAPPKLTAASVYSKLKDIALFTGHSSTGKKVDIIKGM 122
Query: 335 LVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK-PPPNIQSP------ 387
VA E +YLIR L KLRIGLAEQ++L AL + V S+ PPP I +
Sbjct: 123 FVACRHSEARYLIRSLSGKLRIGLAEQSVLTALAHSVVLTPPSSEFPPPVIDAAKTLSSD 182
Query: 388 -----LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKG 442
L+ A VK + LP Y KI+PALL G+ +L N C TPG+P+ PMLA P+KG
Sbjct: 183 ELKKMLDAGALTVKTCYCELPNYNKIIPALLEYGLEDLPNKCYLTPGVPLKPMLAHPSKG 242
Query: 443 VSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKK 502
V+E++ +F+ FTCEYKYDGERAQIH LE+G + IYSRN E NT K+PD++ + ++
Sbjct: 243 VAEVLKRFEGSAFTCEYKYDGERAQIHLLENGEIHIYSRNQENNTSKYPDIISRMPKVMS 302
Query: 503 PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPL 562
++SF++D E VA+DREKQ+ILPFQ LSTR RK+ +S+IKV VC+YAFD+LY NG+
Sbjct: 303 EEIKSFIIDTEAVAWDREKQQILPFQILSTRKRKDADVSEIKVQVCVYAFDLLYLNGKSY 362
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRD 622
++E VRR L SF+E G F FA +TS + +++ +FL+ ++ +CEGL++KT+D D
Sbjct: 363 VKEPFSVRRNLLRTSFKEAEGEFVFAKCMTSTNTEDMAEFLEESIKGNCEGLMVKTLDVD 422
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
ATYE +KRS NWLKLKKDY+ +GD+LDLVPI + G+GKRTG YG FLLACYD+ +EEF
Sbjct: 423 ATYEIAKRSHNWLKLKKDYLADVGDTLDLVPIGGYRGKGKRTGAYGGFLLACYDAESEEF 482
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPAS 742
Q+ICKIGTGF++ +LE + VI KP+PYYR+ D + PD WF+ + E + S
Sbjct: 483 QTICKIGTGFTDEVLESHHQFFKDHVIDKPKPYYRYDDGLEPDHWFDAVQVWEVRAADLS 542
Query: 743 I 743
+
Sbjct: 543 V 543
>gi|14423666|sp|Q9JHY8.1|DNLI1_RAT RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|9050023|gb|AAF82585.1|AF276774_1 DNA ligase I [Rattus norvegicus]
Length = 918
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/573 (46%), Positives = 388/573 (67%), Gaps = 24/573 (4%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 273 YHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPTDLLPVLY 332
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +
Sbjct: 333 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRL 392
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M PLT++ VF F IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 393 MLPSPPLTVSGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRYSEARFIARSLSGRLRL 452
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSP------------------LEEAAKIVKQV 398
GLAEQ++LAAL QA S PP + P LEE I+KQ
Sbjct: 453 GLAEQSVLAALAQAG------SLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQGMILKQT 506
Query: 399 FSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
F +P ++I+P LL G+ +L C +PG+P+ PMLA PT+GV E++ +F++++FTCE
Sbjct: 507 FCEVPDLDRIIPVLLEHGLESLPEHCKLSPGVPLKPMLAHPTRGVREVLKRFEEVDFTCE 566
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
YKY G+RAQIH LE G V+I+SRN E N+GK+PD++ + ++K PSV SF+LD E VA+D
Sbjct: 567 YKYYGQRAQIHVLEGGEVKIFSRNQEDNSGKYPDIISRIPKIKHPSVTSFILDTEAVAWD 626
Query: 519 REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
REK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L ++ L RR+ L ++F
Sbjct: 627 REKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLARQPLSRRRQLLRENF 686
Query: 579 EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638
E G F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLK
Sbjct: 687 VETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLK 746
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
KDY+E +GD+LDLV I A+ GRGKR G YG FLLA YD +EE +ICK+GTGFS+ LE
Sbjct: 747 KDYLEGVGDTLDLVVIGAYLGRGKRPGRYGGFLLAAYDEESEELAAICKLGTGFSDEELE 806
Query: 699 ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
E ++++ ++P PRPY R ++P+ W +P+
Sbjct: 807 EHHQNMQALLLPTPRPYVRIDGAVAPNHWLDPS 839
>gi|242008676|ref|XP_002425128.1| DNA ligase, putative [Pediculus humanus corporis]
gi|212508802|gb|EEB12390.1| DNA ligase, putative [Pediculus humanus corporis]
Length = 786
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 287/671 (42%), Positives = 424/671 (63%), Gaps = 33/671 (4%)
Query: 92 LDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVN- 150
L+T K+ +S + + Q+VA+ ++ V P+ + DN I +K++ K N
Sbjct: 64 LETTEKKSVDSRIKKTSQKVAKLTTSSKVNPLQSS-DNSITDKKDNLDKKNCTNIEKSNN 122
Query: 151 VNSVSAKEKIAEL-KSNIVLLKKKAGE--------------FDPKMVACWEKGERVPFIF 195
+ S S EK+ + K + +K+K + + P ACWE GE+VP+
Sbjct: 123 ITSESKTEKVEKTNKKDSSPVKEKVSKCNVLVEDYNPTLPKYHPIKNACWEYGEKVPYYA 182
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ F+ I + R+ + +I+ N LR+V+ TP+DL+P +YL+ NK+ PAHEGLELG+ +
Sbjct: 183 LTKTFEEIEKVSARLKMIEILSNFLRSVIVLTPDDLLPCIYLSLNKLGPAHEGLELGLAE 242
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLI 315
++I+ ++++ GRTE +GDLGLVA+ SR+SQ +M KP PL + VF F I
Sbjct: 243 QTLIRVISQSTGRTE---------VGDLGLVAEKSRTSQKLMFKPSPLNVNGVFKKFTEI 293
Query: 316 AKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA---AV 372
A GKDS KK + + L A E ++L+R L KLRI A GQ
Sbjct: 294 ANLTGKDSVNKKISMVSNLFTACKGPEAKFLMRSLNGKLRIACA----TTPPGQKYPPKN 349
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
+ + P +S ++E A I+K + P Y +VP LL +G+ L C TPG+P+
Sbjct: 350 LDVSSTMSPDTFKSHVDELALILKTTYCECPNYGMLVPVLLKEGISALPKHCKITPGLPM 409
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
PMLA+PTKGV E++ +F+DMEFTCE+KYDGERAQIHYLE+G V+I+SRN E NT K+PD
Sbjct: 410 KPMLAQPTKGVQEVLTRFEDMEFTCEWKYDGERAQIHYLENGKVKIFSRNQEDNTSKYPD 469
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAF 552
++ + ++KK SV SF+LDCE VA+D+E ILPFQ L R RK+V+ SDIKV VC+Y F
Sbjct: 470 IISRIQQVKKDSVTSFILDCEAVAWDKENNAILPFQVLIKRKRKDVAESDIKVPVCVYMF 529
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCE 612
D+LY NG+PL++E+ RR L ++F E G + FA ++ + ++E+Q+FL+ ++ +CE
Sbjct: 530 DLLYLNGKPLVKEKFIDRRRLLQENFNEVLGEWTFAKSIDTTKMEEVQEFLEESIKGNCE 589
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
GL++KT+ +ATYE +KRS NWLKLKKDY+E +GD+LDLV + + G+GKRTG YG FL+
Sbjct: 590 GLMVKTLREEATYEIAKRSKNWLKLKKDYLEGVGDTLDLVVLGGYLGKGKRTGTYGGFLI 649
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
CYD++NEE+QSICK+GTGFS+ L + + + VI + YY++ ++ PD WFEP +
Sbjct: 650 GCYDNDNEEYQSICKLGTGFSDESLAQHTEFFKPHVITQAPSYYQYDTSMEPDHWFEPIQ 709
Query: 733 RPETSNSPASI 743
ET + S+
Sbjct: 710 VWETKCADFSL 720
>gi|56967028|pdb|1X9N|A Chain A, Crystal Structure Of Human Dna Ligase I Bound To
5'-Adenylated, Nicked Dna
Length = 688
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/567 (47%), Positives = 385/567 (67%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + N+LR+V+ +P DL+PV+Y
Sbjct: 42 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRXVETLSNLLRSVVALSPPDLLPVLY 101
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 102 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 161
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 162 XLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 221
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP ++ LEE I+KQ F +P
Sbjct: 222 GLAEQSVLAALSQAVSLTPPGQEFPPAXVDAGKGKTAEARKTWLEEQGXILKQTFCEVPD 281
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ P LA PT+G+SE++ +F++ FTCEYKYDG+
Sbjct: 282 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPXLAHPTRGISEVLKRFEEAAFTCEYKYDGQ 341
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 342 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 401
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 402 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 461
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL +KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 462 FVFATSLDTKDIEQIAEFLEQSVKDSCEGLXVKTLDVDATYEIAKRSHNWLKLKKDYLDG 521
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 522 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 581
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R + PD W +P+
Sbjct: 582 KALVLPSPRPYVRIDGAVIPDHWLDPS 608
>gi|395528668|ref|XP_003766449.1| PREDICTED: DNA ligase 1, partial [Sarcophilus harrisii]
Length = 709
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/567 (47%), Positives = 382/567 (67%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G+RVP++ ++ F+ I + R+ + +++ N+LR+V+ +P DL+PV+Y
Sbjct: 62 YHPVDDACWKPGQRVPYLAVARTFEKIEEVSARLRMVEMLSNLLRSVVALSPADLLPVLY 121
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLV +ASRS+Q
Sbjct: 122 LSLNQLGPPQQGLELGVGDGVLLKAVAQATGRQLDTIRAEMAERGDVGLVVEASRSTQRT 181
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M LT V R IA+ G + KK IK L VA E +++ R L +LR+
Sbjct: 182 MLPLPHLTAAGVLSKLRDIARLTGSAATSKKIEIIKGLFVACRHSEARFIARALSGRLRL 241
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + +S LEE I+KQ F +P
Sbjct: 242 GLAEQSVLAALAQAVSLTPPGQEFPPAVVDAGKGKAAEARKSWLEEKGLILKQTFCEVPD 301
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
+ I+PALL G+ L C TPG+P+ PMLA PT+G+ E++ +F++ FTCEYKYDG+
Sbjct: 302 LDLIIPALLKHGLDQLPQHCQLTPGVPLKPMLAHPTRGIGEVLKRFEESAFTCEYKYDGQ 361
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH L++G V+I+SRN E NTG++PDV+ V ++K+PSV S +LD E VA+DR K++I
Sbjct: 362 RAQIHVLDNGDVKIFSRNQEDNTGRYPDVISRVPKMKRPSVVSCILDSEAVAWDRAKKQI 421
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ LSTR RK V SDI+V VC+YAFD++Y NGQ L++E L RR+ L ++F E G
Sbjct: 422 QPFQVLSTRKRKEVDESDIQVQVCLYAFDLIYLNGQSLVREPLSRRRQLLRENFIETEGE 481
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D ++I FL+ +V SCEGL++KT++ +ATYE +KRS NWLKLKKDY+E
Sbjct: 482 FVFATSLDTEDTEQIADFLEQSVKDSCEGLMVKTLETNATYEIAKRSHNWLKLKKDYLEG 541
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA +D ++EEFQ+ICK+GTGFS+ LEE +L
Sbjct: 542 VGDTLDLVVIGAYLGRGKRAGRYGGFLLAAFDEDSEEFQAICKLGTGFSDEELEEHYQNL 601
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ VIP PR Y R + PD W EPT
Sbjct: 602 QALVIPAPRSYVRAEGAVPPDHWLEPT 628
>gi|311257832|ref|XP_003127315.1| PREDICTED: DNA ligase 1 [Sus scrofa]
Length = 921
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/567 (47%), Positives = 387/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G+RVP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 275 YHPVQDACWQAGQRVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPADLLPVLY 334
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELGIGD ++KA+A+A GR V+ + E GD+GLVA++SRS+Q +
Sbjct: 335 LSLNRLGPPQQGLELGIGDGILLKAVAQATGRQLESVRAEVAEKGDVGLVAESSRSTQRL 394
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
+ P LT +F FR IA+ AG S KK IK L VA E +++ R L +LR+
Sbjct: 395 VLPPPALTAAGIFTKFRDIAQLAGSASTAKKMEIIKGLFVACRHSEARFIARALSGRLRL 454
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QAA + PP + ++ LEE I+KQ F +P
Sbjct: 455 GLAEQSVLAALAQAASLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 514
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++IVP LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 515 LDRIVPVLLEHGLERLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 574
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTG++PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 575 RAQIHVLEGGEVKIFSRNQEDNTGRYPDIISRIPKIKLPSVTSFILDAEAVAWDREKKQI 634
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V ++I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 635 QPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 694
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D D+I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 695 FVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 754
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ D+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LE SL
Sbjct: 755 VSDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEESEELQAICKLGTGFSDEELEAHHQSL 814
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PR Y R ++PD W +P+
Sbjct: 815 QALVLPAPRSYVRADGAVAPDHWLDPS 841
>gi|307212762|gb|EFN88433.1| DNA ligase 1 [Harpegnathos saltator]
Length = 826
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/621 (43%), Positives = 396/621 (63%), Gaps = 17/621 (2%)
Query: 124 SNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVA 183
+N +N ID EKE + K+K + + +K++ K+ I + P A
Sbjct: 133 NNCTENDIDVEKEEKEKSILLTKQKEDTKN----DKVSNGKNVIQSYNPSMSGYHPINDA 188
Query: 184 CWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIA 243
W++G++ P+ + ++I + R+ I +I+ N R+V+ +P DL+P VYL N++A
Sbjct: 189 YWKQGDKTPYSAFTRTLELIEETSARLKIIEILSNYFRSVIVLSPTDLLPSVYLCLNQLA 248
Query: 244 PAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPL 303
PA+EG+ELG+ D +++KA+A+ GRT + +K Q++GDLG+VA+ SRS+Q M +P PL
Sbjct: 249 PAYEGIELGVADTNLMKAIAQCTGRTLAQIKADVQQIGDLGIVAEGSRSNQRTMFQPAPL 308
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
T++ V+ + IA G S KK ++I+ L VA + E +YLIR L KLRIGLAEQ++
Sbjct: 309 TVSNVYAKLKEIAVMTGHSSLAKKLDKIQTLFVACRNTEARYLIRSLAGKLRIGLAEQSV 368
Query: 364 LAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPVYEKIVPA 411
L AL A PP I + +E A I+K + P Y I+P
Sbjct: 369 LQALALACAMTPPEQTYPPEIINAAKKMSSERFKEKYDEIAIILKTTYCECPNYNLIIPI 428
Query: 412 LLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL 471
LL DG+ L + C TPGIP+ PMLA PTKGV E++ +F+ ++FTCE+KYDGERAQIH
Sbjct: 429 LLEDGIETLPSKCKLTPGIPLKPMLAHPTKGVQEVLTRFEGLKFTCEWKYDGERAQIH-A 487
Query: 472 EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
+G + IYSRN E NT K+PD++ + V + +LDCE VA+D+EK++ILPFQ LS
Sbjct: 488 NNGQINIYSRNQENNTSKYPDIINRFKNTRDELVENCILDCEAVAWDKEKKQILPFQILS 547
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
TR RK+ + DIKV VC++ FD+LY NG+ L++E RRE L F+E G +++A +L
Sbjct: 548 TRKRKDANEEDIKVQVCVFMFDLLYLNGKSLVKEPFAKRRELLKKHFKEVEGEWKYANSL 607
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
+ ++E+Q FLD +V +CEGL++KT++ +ATYE +KRS NWLKLKKDY++ +GD+LD+
Sbjct: 608 DTSMIEEMQIFLDESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDGVGDTLDV 667
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
V I + G+GKRTG YG FLLACYD NEE+QS+CKIGTGF E LE + + VI +
Sbjct: 668 VVIGGYIGKGKRTGTYGGFLLACYDQENEEYQSVCKIGTGFKEEDLENHTKFFKDHVISQ 727
Query: 712 PRPYYRFADTISPDVWFEPTE 732
+ YYRF + PD WFEP +
Sbjct: 728 AKSYYRFDGSHEPDHWFEPIQ 748
>gi|45185533|ref|NP_983249.1| ACL155Wp [Ashbya gossypii ATCC 10895]
gi|44981251|gb|AAS51073.1| ACL155Wp [Ashbya gossypii ATCC 10895]
gi|374106454|gb|AEY95363.1| FACL155Wp [Ashbya gossypii FDAG1]
Length = 697
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/542 (49%), Positives = 369/542 (68%), Gaps = 4/542 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE-GL 249
V + L VF+ + + R+ IT + + + +V++ P L+PV YL N++ P +E GL
Sbjct: 93 VMYADLCAVFEAVEATSSRLSITKLCADFMYSVLKCDPGHLIPVTYLFINRLGPDYEPGL 152
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G+ +IK +++ACG++ + V+ Y+E GDLG VA+ +R Q M KP PLT+ VF
Sbjct: 153 ELGLGEGILIKTISDACGKSAAQVRSSYRECGDLGTVAQQARVVQPTMFKPKPLTVRDVF 212
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
T + IA+ GKDSQ KK IK +L A E +YLIR L+SKLRIGLAE+T+L AL +
Sbjct: 213 STLQAIAQAEGKDSQGKKIRLIKKMLTACQGMEAKYLIRSLESKLRIGLAEKTVLVALSK 272
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + +E K P Q ++ A +V+ F +P YE I+ A L G+ NL C TPG
Sbjct: 273 AILTHEHDGKEPSPEQ--VDAAEALVRDTFCQVPNYEMIINAALQYGIMNLPQHCVLTPG 330
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PMLAKPTK ++E++++FQ FTCEYKYDGERAQ+H +EDG++ IYSRN+E T +
Sbjct: 331 IPLKPMLAKPTKSITEVLDRFQGQRFTCEYKYDGERAQVHLMEDGTIRIYSRNSENMTER 390
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+P++ + RS ++DCE VA+D EKQKILPFQ LSTR RK V L D+KV VC+
Sbjct: 391 YPEIQFHQFLANPQTTRSLIIDCEAVAWDNEKQKILPFQVLSTRKRKGVELKDVKVRVCL 450
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+AFD+LY NG+ LL+ L RR+HLY + PG QFA +T+++L E+Q +L+ +V A
Sbjct: 451 FAFDLLYLNGESLLKCSLADRRKHLYSVLKVVPGELQFANEITTMELSELQTYLEQSVSA 510
Query: 610 SCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
SCEGL++K +D ++ YEPSKRS NWLKLKKDY+E +GDSLDL + A++GRGKRTG YG
Sbjct: 511 SCEGLMVKMLDGEESQYEPSKRSRNWLKLKKDYLEGVGDSLDLAVLGAYYGRGKRTGTYG 570
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
FLL CY+ + EEF++ CKIGTGFSE +L+ + L+ VI PR + D+ PDVWF
Sbjct: 571 GFLLGCYNPDLEEFETCCKIGTGFSEEVLQSLHAQLKDTVIAAPRGDVSYDDSSPPDVWF 630
Query: 729 EP 730
EP
Sbjct: 631 EP 632
>gi|326437875|gb|EGD83445.1| DNA ligase 1 [Salpingoeca sp. ATCC 50818]
Length = 1207
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 278/587 (47%), Positives = 377/587 (64%), Gaps = 17/587 (2%)
Query: 174 AGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP 233
A +DP ACW +G++VP+ L+ F ++ + R+ I + VCN+ R+VM +P LV
Sbjct: 557 AARYDPIASACWCRGQQVPYKALAATFKLVEATSKRLEIINTVCNLFRSVMVLSPASLVH 616
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS 293
+YL N +APA+EG+ELGIGD+ ++KA+ A GR+ ++ +GDLG VA S+S
Sbjct: 617 CIYLCTNDLAPAYEGIELGIGDSILMKAIQIASGRSLQQIRADMATIGDLGEVAAKSQSK 676
Query: 294 QSMM---RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-EPQYLIRL 349
Q + RK PLT+ VF + IA G++SQ++K + I+ LLVA E ++LIR
Sbjct: 677 QRKLTFGRKKKPLTVDAVFAKLKAIAVLKGQNSQQRKVDMIQGLLVACQSSDEAKFLIRA 736
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYN--EQHSKPPP-----------NIQSPLEEAAKIVK 396
L KLRIGLAE ++L+ALGQA Q PPP ++ +EE +K
Sbjct: 737 LGGKLRIGLAELSVLSALGQAIALTPPAQGEYPPPILDASKGVHADKFKATMEECTLKLK 796
Query: 397 QVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFT 456
V+ LP Y+ I+P LL +G+ LS C TPGIP+ PMLA PTKGV E++ +F F
Sbjct: 797 TVYCELPNYDYIIPILLEEGIDALSEKCGITPGIPMKPMLAHPTKGVDEVLQRFDGKTFV 856
Query: 457 CEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVA 516
CEYKYDGERAQ+H E G + IYSRN+E +T K+PDV+ V V FVLDCE VA
Sbjct: 857 CEYKYDGERAQVHRNEKGEMFIYSRNSENHTTKYPDVIANVPNAFAEGVSDFVLDCEAVA 916
Query: 517 YDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYD 576
+D Q+ILPFQ LSTR RK+ + ++V VC++AFD+LY NGQ L++E L RR L
Sbjct: 917 FDMTSQQILPFQVLSTRKRKDATEDSVEVQVCLFAFDLLYLNGQSLVREPLHTRRSLLRS 976
Query: 577 SFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLK 636
+F+ G FQFA L + D DEI FL+ ++ SCEGL+IKT+ DA+YE ++RS +WLK
Sbjct: 977 NFKHVQGRFQFADCLVTSDTDEIGMFLEQSIKDSCEGLMIKTLTEDASYEIARRSHSWLK 1036
Query: 637 LKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
LKKDY+E +GD+LDLV I + G+GKRTG YGAFLLACYD +EE+QSICKIGTGFS+
Sbjct: 1037 LKKDYLEGVGDTLDLVVIGGWLGKGKRTGTYGAFLLACYDEESEEYQSICKIGTGFSDED 1096
Query: 697 LEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
L+ L+ VIP PR YYR+ T++PD WF+ + E + SI
Sbjct: 1097 LKTHFEQLKPHVIPSPRNYYRYDSTLAPDHWFDAAQVWEVKAADLSI 1143
>gi|357472105|ref|XP_003606337.1| DNA ligase [Medicago truncatula]
gi|355507392|gb|AES88534.1| DNA ligase [Medicago truncatula]
Length = 426
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 287/443 (64%), Positives = 338/443 (76%), Gaps = 24/443 (5%)
Query: 58 PNAFQVLMSAA-AKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPS 116
P+AF L+S A A KK P P+SS KKR+ + + K E P+
Sbjct: 7 PSAFDKLLSGARASKKKLPPPSSS------KKRKAPTPPPSSSPH-----KTLETVINPN 55
Query: 117 NDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGE 176
N+L + NP ++ E PS K R S S+ +AELK + LKKK
Sbjct: 56 NNL-----KTVQNPEETVHED----PSSKIRNT---SSSSNGIVAELKEKVPELKKKPEN 103
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
FDP V CWEK + VPF+FLSL FD+IS E GRI+IT+IVCN+LRTV+ TP+DLVPVVY
Sbjct: 104 FDPSSVVCWEKNKPVPFLFLSLAFDLISKERGRIVITEIVCNLLRTVIHATPDDLVPVVY 163
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ANKIAPA++GLELGIGDASII+ALA+ACGRTE H+K QY++ GDLGLVA+ASRSSQ+
Sbjct: 164 LSANKIAPAYKGLELGIGDASIIRALADACGRTEKHIKSQYKKKGDLGLVAQASRSSQTT 223
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
MRK D LTI KVFDTF LIAKE+GKDSQEKKKN IK+LL AATDCEP Y+IRLLQ+KLRI
Sbjct: 224 MRKHDALTIRKVFDTFHLIAKESGKDSQEKKKNHIKSLLFAATDCEPLYIIRLLQTKLRI 283
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
G AEQTLLAALGQAAV+ E+HS PPP I+SPLEEAAKIVK+V+SVLP Y+KIV ALL DG
Sbjct: 284 GYAEQTLLAALGQAAVHTEEHSNPPPGIKSPLEEAAKIVKKVYSVLPDYDKIVSALLKDG 343
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
VW L C FTPG+P+GPML+K TK VSEI+NKFQ +EFTCEYKYDGERAQIH+LE+GSV
Sbjct: 344 VWELPKKCDFTPGVPVGPMLSKATKSVSEILNKFQGVEFTCEYKYDGERAQIHFLENGSV 403
Query: 477 EIYSRNAERNTGKFPDVVLAVSR 499
EIYSRNAERNTGK+PDV+ AVSR
Sbjct: 404 EIYSRNAERNTGKYPDVIAAVSR 426
>gi|321477879|gb|EFX88837.1| hypothetical protein DAPPUDRAFT_304798 [Daphnia pulex]
Length = 677
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/581 (46%), Positives = 384/581 (66%), Gaps = 14/581 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P A W+KGE VP++ L+ ++I + R+ + +I+ N R+V +P+DL+ VY
Sbjct: 32 YHPIQDATWKKGENVPYMVLAKTLELIEETSSRLKMIEILANYFRSVFLLSPDDLLCSVY 91
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++APA+ G+ELG+G+ IIKA+A+A GR VK GD+GLVA+AS+ +Q
Sbjct: 92 LCLNQLAPAYMGIELGVGEGIIIKAIAQATGRATDKVKSDVATKGDVGLVAEASKGTQRT 151
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
+ P LT+ VF +A G SQ KK ++I +LVAA E +++ R L KLRI
Sbjct: 152 LSIPVSLTVKSVFTKLTEVAVMTGNSSQIKKVDKIHGILVAAKQLESRFITRSLAGKLRI 211
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPN------------IQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++L AL AA + PP I++ +E +A I+K + P
Sbjct: 212 GLAEQSVLQALAFAATATPPNQSTPPTQLNCFAGLSSETIKAKVEASAVILKTAYCQCPS 271
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y++I+P LL +GV L C+ TPG+P+ PMLA PT+GV E++ KF+ +FTCE+KYDGE
Sbjct: 272 YDQIIPVLLREGVEALPLHCTLTPGVPLKPMLACPTRGVGEVLQKFESTKFTCEWKYDGE 331
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPS--VRSFVLDCEIVAYDREKQ 522
RAQIH LE+G + IYSRN E NT K+PD++ +PS VRS +LD E VA+D +K+
Sbjct: 332 RAQIHLLENGEIRIYSRNQENNTSKYPDIISRFQSWIEPSASVRSAILDTEAVAWDTDKK 391
Query: 523 KILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEP 582
+ILPFQ LSTR RK+ +DIKV VC+YAFD+LY NG+ L+ L RR+ L++SF +
Sbjct: 392 QILPFQILSTRKRKDAVEADIKVQVCVYAFDLLYLNGESLVTMPLIERRQRLWNSFHKVD 451
Query: 583 GFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYI 642
G F FAT+ ++EI++FLD ++ +CEGL++K + +DATYE +KRS NWLKLKKDY+
Sbjct: 452 GQFGFATSRDPQTVEEIEEFLDESLKGNCEGLMVKGLVKDATYEIAKRSKNWLKLKKDYL 511
Query: 643 ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSS 702
+ IGD++D V I + GRGKRTG+YG FLLACYD NEE+QS+CKIGTGFS+ + S
Sbjct: 512 DGIGDTIDAVVIGGYLGRGKRTGLYGGFLLACYDEANEEYQSLCKIGTGFSDEDFQAHSD 571
Query: 703 SLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
L++ IPKP+PY+RF ++SPD WFEP + E + SI
Sbjct: 572 FLKNHKIPKPKPYFRFDPSLSPDDWFEPVQVWEIKCADLSI 612
>gi|312375309|gb|EFR22707.1| hypothetical protein AND_14322 [Anopheles darlingi]
Length = 738
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 263/502 (52%), Positives = 353/502 (70%), Gaps = 4/502 (0%)
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
VYL+ N++APA+EG+ELGI + S++KA+A++ GR+ + +K Q GDLGLVA+ S+SSQ
Sbjct: 157 VYLSLNQLAPAYEGVELGIAEHSLMKAIAQSTGRSLAQIKTDAQTTGDLGLVAEQSKSSQ 216
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
MM +P PLT+ VF R IA G S KK ++I+A+ VA E +++IR L KL
Sbjct: 217 RMMFRPAPLTVASVFGKLREIASMIGAASMTKKMDKIQAMFVACRHSESRFIIRSLAGKL 276
Query: 355 RIGLAEQTLLAALGQAA----VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVP 410
RIGLAEQ+LL AL QA + + +P +++ ++E A +K V+ P Y +IVP
Sbjct: 277 RIGLAEQSLLQALAQACGDSPIIDALAKEPEAKVKARVDEIALTLKTVYCQCPNYNQIVP 336
Query: 411 ALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY 470
LL GV + C PG P+ PMLA PTKGV E++ +F +EFTCE+KYDGERAQIH
Sbjct: 337 VLLQYGVGEVLERCPMLPGTPLKPMLAHPTKGVQEVLQRFDGLEFTCEWKYDGERAQIHL 396
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
L DGSV I+SRN E NT K+PDV+ + +K +V S +LDCE VA+D EK++ILPFQ L
Sbjct: 397 LSDGSVHIFSRNQENNTSKYPDVIGRLEFTRKDTVESAILDCEAVAWDVEKRQILPFQVL 456
Query: 531 STRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
STR RK+ + +DIKV VC++ FD+LY NGQPL++ RRE LY F E G +++AT
Sbjct: 457 STRKRKDANEADIKVQVCVFMFDLLYLNGQPLVERPFSERRELLYTHFREIEGQWKYATR 516
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLD 650
L + DLDE+Q+FLD AV +CEGL++KT+ RDATYE +KRS NWLKLKKDY+ +GDSLD
Sbjct: 517 LDTGDLDELQRFLDEAVRGNCEGLMVKTLKRDATYEIAKRSRNWLKLKKDYLTGVGDSLD 576
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP 710
LV I + G+GKRTG YG FLLACYD++NEE+Q+ICKIGTGFS+ L+ + L + VIP
Sbjct: 577 LVVIGGYRGKGKRTGTYGGFLLACYDADNEEYQTICKIGTGFSDEDLQRHTEFLGAHVIP 636
Query: 711 KPRPYYRFADTISPDVWFEPTE 732
+ +PYYR+ + PD WFE +
Sbjct: 637 RAKPYYRYEANLEPDDWFEAVQ 658
>gi|119480745|ref|XP_001260401.1| DNA ligase Cdc9, putative [Neosartorya fischeri NRRL 181]
gi|119408555|gb|EAW18504.1| DNA ligase Cdc9, putative [Neosartorya fischeri NRRL 181]
Length = 840
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 276/553 (49%), Positives = 373/553 (67%), Gaps = 16/553 (2%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 212 WKPGEPVPYAALCTTFSLIEMTTKRLIILAHCSLFLRQVLRLTPQDLLPTVQLMINKLAA 271
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 272 DYAGIELGIGESFIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLT 331
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ V + IAK G+ SQ+KK + IK LL E ++++R L+ KLR+GLAE+T+L
Sbjct: 332 VRGVHEGLIAIAKIQGQGSQDKKISAIKKLL------EAKFIVRFLEGKLRLGLAEKTVL 385
Query: 365 AALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL 420
AL QA V +E + P P + + ++K V+S LP YE I+PA+L G++NL
Sbjct: 386 VALAQAVVAHEAAVRGEKTPSPE---KMAQGEAVLKTVYSELPAYEVIIPAMLEHGLFNL 442
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
C PGIPI PMLAKPTK ++E++N+F+ +FTCEYKYDGERAQIHY G I+S
Sbjct: 443 PKVCKLQPGIPIKPMLAKPTKSITEVLNRFEGKDFTCEYKYDGERAQIHYDSKGLSAIFS 502
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
RN+E + K+PDV+ + K V+SFVLDCE VA+D +K+LPFQ L TR RK+V
Sbjct: 503 RNSEDLSKKYPDVLAKLETWVKDGVKSFVLDCETVAWDTVNKKVLPFQQLMTRKRKDVKA 562
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
D+KV VCI+AFD+L+ NG+P +++ LR RRE L+ SFE G FQFA + DL+EIQ
Sbjct: 563 EDVKVKVCIFAFDLLFLNGEPTVKKTLRERRELLHSSFEVVEGEFQFAQHGDTNDLEEIQ 622
Query: 601 KFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
LD +V ASCEGL++K +D ++ YEPSKRS NWLK+KKDY+ +GDSLDLV + A+HG
Sbjct: 623 NLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLVVLGAYHG 682
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFA 719
RGKRT VYGAFLLA Y+S+ + +++IC IGTGFSEA+LEE L I +P+P+Y +
Sbjct: 683 RGKRTSVYGAFLLAAYNSSTQTYETICNIGTGFSEALLEELYKELSPLTIDRPKPFYSHS 742
Query: 720 DT--ISPDVWFEP 730
+ PDVWFEP
Sbjct: 743 NVPKDQPDVWFEP 755
>gi|195122766|ref|XP_002005882.1| GI20719 [Drosophila mojavensis]
gi|193910950|gb|EDW09817.1| GI20719 [Drosophila mojavensis]
Length = 736
Score = 553 bits (1426), Expect = e-154, Method: Compositional matrix adjust.
Identities = 276/619 (44%), Positives = 404/619 (65%), Gaps = 16/619 (2%)
Query: 131 IDSEKESQPTPPSPKK-RKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGE 189
+DSE++ + PSP K RK+ +NS + + +E V + P A W+
Sbjct: 59 VDSEEKMELEAPSPVKVRKMELNSGLPENEASEAYDPSV------ETYHPINDAYWKAQR 112
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
P++ L+ F +I GR+ + D + N +VM +PEDL+P VYL+ N++APA+EGL
Sbjct: 113 TTPYLALARTFQVIEETKGRLKMIDTLSNFFCSVMLVSPEDLLPCVYLSINQLAPAYEGL 172
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+ + +++KA+ +A GR +H+K Q Q GDLG+VA+ SR SQ MM +P PL + VF
Sbjct: 173 ELGVAETTLMKAICKATGRNLAHIKSQTQLTGDLGIVAEQSRVSQRMMFRPKPLNVRGVF 232
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
+ IA +G + K + + VA E ++ IR L KLRIG+AEQ+LL AL
Sbjct: 233 AKLKEIANISG----QAKITLVYDVFVACRHAEARFFIRSLIGKLRIGIAEQSLLTALAI 288
Query: 370 AAV----YNEQHSKPPPNI-QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
A V N+ + +I + + + I+K +S P Y+ ++PALL + L + C
Sbjct: 289 ALVKRNHINDCKAHKVCDIYKDEIADTTLILKTTYSQCPNYDIVIPALLKYDIKELQDRC 348
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
PG+P+ PMLA+PTKGVSE++ +F M+ TCE+KYDGERAQIH +DG + I+SRN+E
Sbjct: 349 PMHPGMPLRPMLAQPTKGVSEVLERFSGMQITCEWKYDGERAQIHLNKDGEISIFSRNSE 408
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
NT K+PD++ L K +V +++LD EIVA+D E+++ILPFQ L+TR RKNV ++DIK
Sbjct: 409 NNTPKYPDLIARSKSLVKGNVETYILDSEIVAWDIERKQILPFQILTTRKRKNVDIADIK 468
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
V VC+Y FD+LY NG L+ + L RR+ L + F+E G +QFAT L + D+DE+Q+FL+
Sbjct: 469 VQVCVYIFDLLYFNGVSLVTKPLSERRKILMEHFQEVEGEWQFATALDTTDMDEVQQFLE 528
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
++ +CEGL++KT+D +ATYE +KRS NWLKLKKDY+ ++GDSLDLV I + G+G+RT
Sbjct: 529 ESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRT 588
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
G+YG FLLACYD+ NEE+QSICKIGTGF++ L + S L + VI + Y+R+ ++ P
Sbjct: 589 GIYGGFLLACYDTENEEYQSICKIGTGFTDEDLRQHSEFLSAHVISSAKSYFRYDPSLEP 648
Query: 725 DVWFEPTERPETSNSPASI 743
D WFEP + E + S+
Sbjct: 649 DAWFEPVQVWEVKCADLSL 667
>gi|90079511|dbj|BAE89435.1| unnamed protein product [Macaca fascicularis]
Length = 612
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/532 (49%), Positives = 370/532 (69%), Gaps = 12/532 (2%)
Query: 212 ITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES 271
+ + + N+LR+V+ +P DL+PV+YL+ N + P +GLELG+GD ++KA+A+A GR
Sbjct: 1 MVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLE 60
Query: 272 HVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRI 331
V+ + E GD+GLVA+ SRS+Q +M P PLT + VF FR IA+ G S KK + I
Sbjct: 61 SVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKIDII 120
Query: 332 KALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI------- 384
K L VA E +++ R L +LR+GLAEQ++LAAL QA + PP +
Sbjct: 121 KGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGR 180
Query: 385 -----QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKP 439
++ LEE I+KQ F +P ++I+P LL G+ L C +PGIP+ PMLA P
Sbjct: 181 TAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHP 240
Query: 440 TKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSR 499
T+GVSE++ +F++ FTCEYKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ + +
Sbjct: 241 TRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPK 300
Query: 500 LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNG 559
+K PSV SF+LD E VA+DREK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG
Sbjct: 301 IKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNG 360
Query: 560 QPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM 619
+ L++E L RR+ L ++F E G F FAT+L + D+++I +FL+ +V SCEGL++KT+
Sbjct: 361 ESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTL 420
Query: 620 DRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNN 679
D DATYE +KRS NWLKLKKDY++ +GD+LDLV I A+ GRGKR G YG FLLA YD ++
Sbjct: 421 DVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDS 480
Query: 680 EEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
EE Q+ICK+GTGFS+ LEE SL++ V+P PRPY R ++PD W +P+
Sbjct: 481 EELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVTPDHWLDPS 532
>gi|345312731|ref|XP_001516930.2| PREDICTED: DNA ligase 1 [Ornithorhynchus anatinus]
Length = 819
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/524 (50%), Positives = 355/524 (67%), Gaps = 12/524 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW G+RVP++ ++ F+ I + R+ I + + N+ R+V+ +P DL+P +Y
Sbjct: 237 YHPTQDACWRHGQRVPYLAVARTFEKIEEVSARLRIVETLSNLFRSVISLSPTDLLPCIY 296
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++ PAHEGLELG+GD ++KA+A+A GR V+ + E GD+GLVA++SRS+Q
Sbjct: 297 LCLNRLGPAHEGLELGVGDTVLLKAIAQATGRQLDAVRAEAAERGDVGLVAESSRSTQRT 356
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
+ P PLT+ VF + IAK AG S KK IK L VA E +++ R L KLRI
Sbjct: 357 VFAPAPLTVPGVFAKLKEIAKMAGNASMNKKIEIIKGLFVACRHSEARFIARSLSGKLRI 416
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAA+ QAA PP + ++ +EE IVKQ F +P
Sbjct: 417 GLAEQSVLAAIAQAATLTPPSQGYPPEVPDAGKGKSAEARKAWIEERVLIVKQTFCEVPN 476
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y+ IVP LL GV +L + C TPG+P+ PMLA PTKGV E++ +F++ FTCEYKYDG+
Sbjct: 477 YDTIVPVLLEHGVESLPDRCKLTPGVPLKPMLAHPTKGVGEVLKRFEEAAFTCEYKYDGQ 536
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V IYSRN E NT ++PDV+ V ++KK SV S +LD E VA+DR++++I
Sbjct: 537 RAQIHILESGEVRIYSRNQEDNTARYPDVIARVPKMKKASVTSCILDTEAVAWDRDRKQI 596
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V ++IKV VCIYAFDI+Y NG+PL+++ L RR+ L++ F E G
Sbjct: 597 QPFQVLTTRKRKEVDAAEIKVQVCIYAFDIIYLNGEPLVRQPLSRRRQLLHEHFVETEGE 656
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT L S D D+I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY+E
Sbjct: 657 FVFATALDSADTDQISEFLEQSVRDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEG 716
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
+GD+LDLV I + GRGKR G YG FLLA YD EEFQ++CK+
Sbjct: 717 VGDTLDLVVIGVYLGRGKRAGRYGGFLLAAYDDEGEEFQAVCKV 760
>gi|342318887|gb|EGU10843.1| DNA ligase [Rhodotorula glutinis ATCC 204091]
Length = 872
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/557 (48%), Positives = 383/557 (68%), Gaps = 7/557 (1%)
Query: 180 KMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAA 239
K W+ GE VP+ L+ F I T R+ I+ + L V+E TPEDL+ VYL
Sbjct: 235 KAQTSWKSGEPVPYAALTATFSKIEATTKRLEISAYLTRFLIDVIEKTPEDLLKTVYLCI 294
Query: 240 NKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRK 299
N++AP +E +ELGIG++ ++KA+ E+CGRT + VK +Y+++GDLG VA SR+ Q + K
Sbjct: 295 NRLAPEYEPIELGIGESLLMKAIGESCGRTLAQVKAEYKKIGDLGEVAFNSRTRQKTLFK 354
Query: 300 PDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLA 359
PLT+ VFD + +AK +GKDSQ +K IK+LL E ++LIR L+ KLRIGLA
Sbjct: 355 SKPLTVKGVFDELKKVAKTSGKDSQGRKVGLIKSLLAKCEGEETKFLIRSLEGKLRIGLA 414
Query: 360 EQTLLAALGQAAVYNEQHSKPPPN-----IQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
E+T+L +L AAV E H+K + + LEE A+I+K VFS +P Y+ +VPALL
Sbjct: 415 EKTVLVSLAHAAVTAE-HNKSGKKWSRERLSAQLEEGAEILKSVFSEIPSYDLVVPALLD 473
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
G+ +L CS TPGIP+ PMLAKPTK ++E++++F+ +FTCEYKYDGERAQIHYLEDG
Sbjct: 474 KGMSHLQEACSLTPGIPLKPMLAKPTKAITEVLDRFEGKQFTCEYKYDGERAQIHYLEDG 533
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
S++++SRN+E T K+P+ V + + KP+ +SFV+D E VA+D E++++L FQ LSTR
Sbjct: 534 SIKVFSRNSEDMTVKYPEFVTQLPKCIKPNTKSFVIDAEAVAWDTEEKRLLEFQKLSTRK 593
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI 594
RK+V DIKV V ++AFD+LY NG+ LL++ LR RRE L D + G F FA + +
Sbjct: 594 RKDVKAEDIKVKVHLFAFDLLYLNGESLLEKNLRERRELLRDHLQPVEGEFAFAQSDDAS 653
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDRD-ATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
++EIQ FLD ++ CEGL++K ++ + A+YEPS+RS++WLKLKKDY++ +GDS DLV
Sbjct: 654 TVEEIQTFLDQSIKDGCEGLMVKMLEGEGASYEPSRRSIHWLKLKKDYLQGVGDSFDLVV 713
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR 713
I +G+GKRT VYGAF LAC+D+ + +Q ICKIGTGFS+ L++ +L+ + + +
Sbjct: 714 IGGDYGKGKRTNVYGAFHLACFDAESGTYQMICKIGTGFSDEALKQHHETLKPLELAQKK 773
Query: 714 PYYRFADTISPDVWFEP 730
YY PDV+FEP
Sbjct: 774 AYYDIGTAKGPDVYFEP 790
>gi|443700074|gb|ELT99220.1| hypothetical protein CAPTEDRAFT_157358 [Capitella teleta]
Length = 603
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/533 (50%), Positives = 355/533 (66%), Gaps = 13/533 (2%)
Query: 224 METTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDL 283
M +P+DL+ VYL N++APA+EG+ELGIG+ ++KA+A+A GR+ +K E GDL
Sbjct: 1 MVLSPDDLLSSVYLCLNQLAPAYEGVELGIGETILMKAIAQATGRSVDKIKIDAHEKGDL 60
Query: 284 GLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEP 343
GLVA+ASR +Q M P LT++ VF R IA G KK ++IK +LVA E
Sbjct: 61 GLVAEASRGTQRTMFTPPKLTLSSVFSKLREIALMTGNSVMTKKLDKIKGMLVACRQSEA 120
Query: 344 QYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEA 391
+YLIR L KLRIGLAEQ++L AL QAAV PP + + ++EA
Sbjct: 121 RYLIRSLSGKLRIGLAEQSVLQALAQAAVLTPPAQDFPPEVMDASKGVSAEVFKKKVDEA 180
Query: 392 AKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ 451
+VK + P Y I+P LL +G+ L N C TPG+P+ PMLA PTKGV E+ N+F
Sbjct: 181 TLVVKGTYCECPNYGAIIPVLLKEGLTELPNKCKLTPGVPLKPMLAHPTKGVHEVFNRFD 240
Query: 452 DMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLD 511
FTCE+KYDGERAQIH +DGS+ +YSRN+E NT K+PD++ + + K V S V+D
Sbjct: 241 KAAFTCEFKYDGERAQIHICDDGSINVYSRNSEDNTSKYPDIISRMPTVTKEGVVSAVID 300
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
E VA+D+E +ILPFQ LSTR RK+ + DIKV VC+YAFD+LY NG+ L++E LR RR
Sbjct: 301 SEAVAWDKENSQILPFQILSTRKRKDANEKDIKVQVCVYAFDLLYLNGKSLVKEPLRKRR 360
Query: 572 EHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA-SCEGLIIKTMDRDATYEPSKR 630
E L+DSF E G F FA ++ S D D+I FLD ++ +CEGL++KT+D DATYE +KR
Sbjct: 361 ELLHDSFNEIEGQFLFAKSMMSTDTDDIAVFLDDSIKGRNCEGLMVKTLDEDATYEIAKR 420
Query: 631 SLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGT 690
S NWLKLKKDY++ +GD+LDLV I +HG GKRTG YG FLLACYD NEEFQSICKIGT
Sbjct: 421 SHNWLKLKKDYLDGVGDTLDLVVIGGYHGSGKRTGRYGGFLLACYDEENEEFQSICKIGT 480
Query: 691 GFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
GF + LE+ + + V+ PRPYYR+ ++ PD WF+ + E + S+
Sbjct: 481 GFKDEDLEQHAKFFKDHVLDTPRPYYRYDNSHEPDHWFDAVQVWEVKAADLSV 533
>gi|71001108|ref|XP_755235.1| DNA ligase Cdc9 [Aspergillus fumigatus Af293]
gi|66852873|gb|EAL93197.1| DNA ligase Cdc9, putative [Aspergillus fumigatus Af293]
gi|159129320|gb|EDP54434.1| DNA ligase Cdc9, putative [Aspergillus fumigatus A1163]
Length = 909
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/553 (49%), Positives = 372/553 (67%), Gaps = 16/553 (2%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 281 WKPGEPVPYAALCKTFSLIEMTTKRLIILAHCSLFLRQVLRLTPQDLLPTVQLMINKLAA 340
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 341 DYAGIELGIGESFIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLT 400
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ V + IAK G+ SQ+KK + IK LL E ++++R L+ KLR+GLAE+T+L
Sbjct: 401 VRGVHEGLIAIAKIQGQGSQDKKISAIKKLL------EAKFIVRFLEGKLRLGLAEKTVL 454
Query: 365 AALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL 420
AL QA V +E + P P + + ++K V+S LP YE I+PA+L G++NL
Sbjct: 455 VALAQAVVAHEAAVRGEKTPSPE---KMAQGEAVLKTVYSELPAYEVIIPAMLEHGLFNL 511
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
C PGIPI PMLAKPTK ++E++N+F+ FTCEYKYDGERAQIHY G I+S
Sbjct: 512 PKVCKLQPGIPIKPMLAKPTKSITEVLNRFEGKNFTCEYKYDGERAQIHYDSKGLSAIFS 571
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
RN+E + K+PDV+ + K V+SFVLDCE VA+D +K+LPFQ L TR RK+V
Sbjct: 572 RNSEDLSKKYPDVLAKLETWVKDGVKSFVLDCETVAWDTVNKKVLPFQQLMTRKRKDVKA 631
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
D+KV VCI+AFD+L+ NG+P +++ LR RRE L+ SFE G FQFA + DL+EIQ
Sbjct: 632 EDVKVKVCIFAFDLLFLNGEPTVKKTLRERRELLHKSFEVVEGEFQFAQHGDTNDLEEIQ 691
Query: 601 KFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
LD +V ASCEGL++K +D ++ YEPSKRS NWLK+KKDY+ +GDSLDLV + A++G
Sbjct: 692 NLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLVVLGAYYG 751
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFA 719
RGKRT VYGAFLLA Y+S+ + +++IC IGTGFSEA+LEE L I +P+P+Y +
Sbjct: 752 RGKRTSVYGAFLLAAYNSSTQTYETICNIGTGFSEALLEELYKELSPLTIDRPKPFYSHS 811
Query: 720 DT--ISPDVWFEP 730
+ PDVWFEP
Sbjct: 812 NVPKDQPDVWFEP 824
>gi|195489363|ref|XP_002092706.1| GE14336 [Drosophila yakuba]
gi|194178807|gb|EDW92418.1| GE14336 [Drosophila yakuba]
Length = 747
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 286/686 (41%), Positives = 421/686 (61%), Gaps = 37/686 (5%)
Query: 76 QPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDNPIDSEK 135
Q +++ S+S PKK +D +T ++ E A + V+P+S +DSE+
Sbjct: 12 QSDANDSASPPKKVPKIDAKTELPDEPLIK---SESASPETKAKVEPMS------VDSEE 62
Query: 136 ESQP-----TPPSPKKRK--------VNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMV 182
++ P T P + K + +NS SA K ++ A + P
Sbjct: 63 KTSPVKNVKTEPKDVEDKTTDKKVTTIGLNSTSAT------KEDMENYDPSADSYHPLKN 116
Query: 183 ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKI 242
A W+ + P++ L+ F +I GR+ + D + N +VM +P+DLVP VYL+ N++
Sbjct: 117 AYWKDKKVTPYLALARTFQVIEETKGRLKMIDTLSNFFCSVMLVSPDDLVPSVYLSINQL 176
Query: 243 APAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP 302
APA+EGLELG+ + +++KA+ +A GR +H+K Q +GDLG+VA+ SR SQ MM +P P
Sbjct: 177 APAYEGLELGVAETTLMKAICKATGRNLAHIKSQTHLIGDLGIVAEQSRVSQRMMFQPAP 236
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
L + VF R IAK +G + K +++ + VA E ++ IR L KLRIG+AEQ+
Sbjct: 237 LNVRDVFRKLREIAKISG----QSKMDQVYNMFVACRSSEARFFIRSLIGKLRIGIAEQS 292
Query: 363 LLAALGQAAVYNEQ-----HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGV 417
LL AL V SK P + + E ++K + P Y+ I+PA+L +
Sbjct: 293 LLTALAVGLVKKNHIDDCKASKVPEVYKDEIAETTLLLKTAYCQCPNYDIIIPAILKYDI 352
Query: 418 WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE 477
L C PG+P+ PMLA+PTKGV E+ +F M+ TCE+KYDGERAQIH E G +
Sbjct: 353 KELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGGMQITCEWKYDGERAQIHRNEKGEIS 412
Query: 478 IYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
I+SRN+E NT K+PD++ + L K ++S+++D EIVA+D E+++ILPFQ LSTR RKN
Sbjct: 413 IFSRNSENNTAKYPDLIARSAGLLKGDIKSYIIDSEIVAWDVERKQILPFQVLSTRKRKN 472
Query: 538 VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD 597
V + +IKV VC+Y FD+LY NG L+ + L RR+ L + F+E G ++FAT L + D+D
Sbjct: 473 VDIEEIKVQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDID 532
Query: 598 EIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAF 657
E+Q+FL+ ++ +CEGL++KT+D +ATYE +KRS NWLKLKKDY+ ++GDSLDLV I +
Sbjct: 533 EVQQFLEESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGY 592
Query: 658 HGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYR 717
G+G+RTG YG FLLACYD+ NEE+QSICKIGTGF++ L+ S L V + YYR
Sbjct: 593 KGKGRRTGTYGGFLLACYDTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSTAKSYYR 652
Query: 718 FADTISPDVWFEPTERPETSNSPASI 743
+ ++ PD WFEP + E + S+
Sbjct: 653 YDPSLEPDHWFEPVQVWEVKCADLSL 678
>gi|213401441|ref|XP_002171493.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
gi|211999540|gb|EEB05200.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
Length = 730
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 286/640 (44%), Positives = 412/640 (64%), Gaps = 19/640 (2%)
Query: 107 KIQEVAEEPSND---LVKPISNQIDNPIDSEKESQPTP-PSPKKR----KVNVNSVSAKE 158
K+++ + +ND L SN+ N +DS+ E PSPK+ K N + +
Sbjct: 17 KLKDASRNENNDPVSLSTGSSNKRKNSVDSKAEKMDIDGPSPKENGRSIKKNKKNTPVDD 76
Query: 159 KIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLV--FDMISNETGRILITDIV 216
S+ + K G+ + E + F S+V F + T R+ I DI+
Sbjct: 77 TDTSSTSSASTVNKADGKGKQETTKAKEAAQGPHLTFASMVNTFTKVEATTKRLEIIDIM 136
Query: 217 CNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQ 276
N V P DL+ +YL+ NK+ P +EG+ELGIG++ IIKA+AE+ G+T VK
Sbjct: 137 RNFFFAVFRDYPSDLLQSIYLSINKLGPDYEGIELGIGESFIIKAIAESTGQTLQQVKHS 196
Query: 277 YQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLV 336
YQ++GDLGL+A++SR +Q M KP PLTI +F T + IA G SQ +K I+ LL
Sbjct: 197 YQKVGDLGLIAQSSRQNQPTMFKPAPLTIPVLFKTLKNIASMTGSQSQARKIGLIRRLLS 256
Query: 337 AATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAA-VYNEQH--SKPPPNIQSPLEEAAK 393
+ + EP+YL+R+L+ KLR+ LAE+T++ +L AA +Y+ + +K P I + EA +
Sbjct: 257 SCQNEEPKYLVRMLEGKLRLNLAEKTIIVSLAHAAAMYHAEKDSTKVNPEICA---EAEQ 313
Query: 394 IVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDM 453
++ V+S LP Y+ I+P LL G+ L ++C TPG+P+ PMLAKP+K +SE++++F+
Sbjct: 314 KLRDVYSQLPSYDFIIPHLLEHGLEGLEDSCKLTPGVPMKPMLAKPSKQISEVLDRFERS 373
Query: 454 EFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCE 513
+FTCEYKYDGERAQIH+ EDG + ++SRN+E +G++PD+V +VSR +KP+ SF+LDCE
Sbjct: 374 KFTCEYKYDGERAQIHFTEDGKLRVFSRNSEDVSGRYPDIVESVSRWRKPTSTSFILDCE 433
Query: 514 IVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREH 573
V +DR++ KILPFQ LSTR RK+V L D+KV CI+AFD+LY NG+ LL RR
Sbjct: 434 AVGWDRDEHKILPFQILSTRKRKDVQLEDVKVRACIFAFDLLYLNGKSLLTTPFIERRRL 493
Query: 574 LYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSKRSL 632
LYD+F G F FA + + ++I+KFL+ ++ SCEGL++K +D ++ YEPSKRS
Sbjct: 494 LYDAFSPAEGEFTFAKSSDAQSSEDIEKFLENSIHDSCEGLMVKMLDGPESHYEPSKRSR 553
Query: 633 NWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGF 692
NWLKLKKDY+ +GDS DL+ I A+HGRGKRT VYGA+LL CYD + E Q+ICK+GTGF
Sbjct: 554 NWLKLKKDYLSGVGDSFDLIVIGAYHGRGKRTSVYGAYLLGCYDPDTEMIQTICKLGTGF 613
Query: 693 SEAMLEERSSSLRSKVIPKPRPYYRFADTIS--PDVWFEP 730
SE +LE+ + + V KP+ Y +D + PDVWFEP
Sbjct: 614 SEELLEKFYNQFKDTVTLKPKEYISHSDVPAHQPDVWFEP 653
>gi|300176568|emb|CBK24233.2| unnamed protein product [Blastocystis hominis]
Length = 645
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 270/582 (46%), Positives = 389/582 (66%), Gaps = 14/582 (2%)
Query: 176 EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
++DP A W++ E VP+ ++ + D + R I + N+ R+++ TTP+DL+P V
Sbjct: 7 KYDPIQGAIWKQKEAVPYKAVASLLDEVEKIGERNRIISLTANLFRSIIATTPDDLLPTV 66
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL N++AP++EGLELGIGD IIKA+ EA G++ + +K + ++ GDLG VA +S+Q
Sbjct: 67 YLLINQVAPSYEGLELGIGDGIIIKAIQEATGKSSASIKSELKKHGDLGDVAMTCKSTQR 126
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
++ P PLT+ +F F +A+ G +Q +K IK LLV+A E ++L+R LQ KLR
Sbjct: 127 LLFPPPPLTVRGLFKDFLSLAQLEGNSTQSRKVGVIKRLLVSAHGSEIKFLVRGLQGKLR 186
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPP------------NIQSPLEEAAKIVKQVFSVLP 403
+GLAEQ++LAAL A V + PP +Q+ L +A + VKQ S P
Sbjct: 187 VGLAEQSVLAALAHAVVLTPPSATLPPPVLDASLHTNPAKLQTMLSDAVETVKQALSECP 246
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
Y+K++PA+L + L+ C TPGIP+ PMLAKPTKG+SE++++ Q +FTCE+KYDG
Sbjct: 247 SYDKLIPAVLQAPLSQLNQICHLTPGIPVHPMLAKPTKGISEVLDRLQGRQFTCEFKYDG 306
Query: 464 ERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQK 523
ERAQIH EDG+++I+SRN E NT K+PD+V A+ SV +F++D E VA+DRE ++
Sbjct: 307 ERAQIHRREDGTIKIFSRNNEDNTSKYPDLVKALQDCVSASVGTFIVDSECVAWDREAKR 366
Query: 524 ILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG 583
ILPFQ LSTRARK V ++K+ V I+AFD+L+ NG+ L+Q+ LR RR L ++F+E G
Sbjct: 367 ILPFQILSTRARKEVKEEEVKIHVVIFAFDLLFLNGESLIQKPLRERRALLRENFKEVEG 426
Query: 584 FFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE 643
FA+ + D ++IQ FL +V CEGL+IKT++ +ATYEPSKRSLNWLKLKKDY++
Sbjct: 427 KIHFASFMDDNDTEKIQAFLLESVANGCEGLMIKTLEENATYEPSKRSLNWLKLKKDYLQ 486
Query: 644 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK-IGTGFSEAMLEERSS 702
+GDS+DLVPI ++G+GKRTG +GAFLLAC+D ++EEFQSICK IGTGFS+ L++ S
Sbjct: 487 DLGDSMDLVPIGGYYGKGKRTGNFGAFLLACFDESSEEFQSICKVIGTGFSDDALKQYSE 546
Query: 703 SL-RSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
++ P + ++ PDVW P + E + SI
Sbjct: 547 FFSNGNLLDHKLPIFNVNPSVEPDVWLNPVQVWEVRAADLSI 588
>gi|194373981|dbj|BAG62303.1| unnamed protein product [Homo sapiens]
Length = 612
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/532 (49%), Positives = 368/532 (69%), Gaps = 12/532 (2%)
Query: 212 ITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES 271
+ + + N+LR+V+ +P DL+PV+YL+ N + P +GLELG+GD ++KA+A+A GR
Sbjct: 1 MVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLE 60
Query: 272 HVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRI 331
V+ + E GD+GLVA+ SRS+Q +M P PLT + VF FR IA+ G S KK + I
Sbjct: 61 SVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTAKKIDII 120
Query: 332 KALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI------- 384
K L VA E +++ R L +LR+GLAEQ++LAAL QA + PP +
Sbjct: 121 KGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGK 180
Query: 385 -----QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKP 439
++ LEE I+KQ F +P ++I+P LL G+ L C +PGIP+ PMLA P
Sbjct: 181 TAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHP 240
Query: 440 TKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSR 499
T+G+SE++ +F++ FTCEYKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ + +
Sbjct: 241 TRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPK 300
Query: 500 LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNG 559
+K PSV SF+LD E VA+DREK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG
Sbjct: 301 IKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNG 360
Query: 560 QPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM 619
+ L++E L RR+ L ++F E G F FAT+L + D+++I +FL+ +V SCEGL++KT+
Sbjct: 361 ESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTL 420
Query: 620 DRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNN 679
D DATYE +KRS NWLKLKKDY++ +GD+LDLV I A+ GRGKR G YG FLLA YD ++
Sbjct: 421 DVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDS 480
Query: 680 EEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
EE +ICK+GTGFS+ LEE SL++ V+P PRPY R + PD W +P+
Sbjct: 481 EELHAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVIPDHWLDPS 532
>gi|354475980|ref|XP_003500203.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Cricetulus
griseus]
Length = 931
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/560 (47%), Positives = 384/560 (68%), Gaps = 12/560 (2%)
Query: 183 ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKI 242
ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+YL+ N++
Sbjct: 291 ACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPPDLLPVLYLSLNRL 350
Query: 243 APAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP 302
P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +M P P
Sbjct: 351 GPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRLMLPPPP 410
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LT + VF F IA+ G S KK + IK L VA E +++ R L +LR+GLAEQ+
Sbjct: 411 LTTSGVFTKFCDIARLTGSASMAKKLDVIKGLFVACRHSEARFIARSLSGRLRLGLAEQS 470
Query: 363 LLAAL---------GQA---AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVP 410
+LAAL GQ AV + K ++ LEE I+KQ F +P ++I+P
Sbjct: 471 VLAALALAVSLTPPGQEFPPAVVDAGKGKTTEARKTWLEEQGMILKQTFCEVPDLDRIIP 530
Query: 411 ALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY 470
LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++++FT YKYDG+RAQIH
Sbjct: 531 VLLEHGLERLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEVDFTXLYKYDGQRAQIHV 590
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I PFQ L
Sbjct: 591 LEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVL 650
Query: 531 STRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
+TR RK V S+I+V VC+YAFD++ G+ L+++ L RR+ L ++F E G F FAT+
Sbjct: 651 TTRKRKEVDASEIQVQVCLYAFDLICLQGESLIRQPLSRRRQLLRENFVETEGEFVFATS 710
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLD 650
L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKD++ +GD+LD
Sbjct: 711 LDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDFLVGVGDTLD 770
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP 710
LV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LEE SL++ V+P
Sbjct: 771 LVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEHHQSLKALVLP 830
Query: 711 KPRPYYRFADTISPDVWFEP 730
PRPY R ++PD W +P
Sbjct: 831 TPRPYVRIDGAVAPDHWLDP 850
>gi|281200629|gb|EFA74847.1| DNA ligase I [Polysphondylium pallidum PN500]
Length = 1072
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/580 (45%), Positives = 383/580 (66%), Gaps = 28/580 (4%)
Query: 172 KKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDL 231
K ++DP A W+KG+ VP++ L+ F+ I + R+LI + + N+ R+V+ +P DL
Sbjct: 423 KALSKYDPIKDAPWKKGQVVPYMALAKTFERIEETSRRLLIIENLTNLFRSVIVLSPADL 482
Query: 232 VPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASR 291
V +YL+ NKI P++ G ELGIG++ ++KA++E+ GRT +K++ ++ GDLG+VA++SR
Sbjct: 483 VTCIYLSINKIGPSYSGKELGIGESILMKAVSESTGRTMDSIKQEAKDAGDLGIVAQSSR 542
Query: 292 SSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQ 351
++Q M PLTI K K+ IK LLVA DCE Y+IR LQ
Sbjct: 543 TTQQTMFPLPPLTI--------------------KSKDLIKKLLVACKDCEAMYIIRSLQ 582
Query: 352 SKLRIGLAEQTLLAALGQAAV-------YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
KLRIGLAE +++ AL +A + + S P Q+ +E+A + + +S P
Sbjct: 583 GKLRIGLAEGSVITALSRAITITPNDNTLDVRKSISPEEFQAKVEKAIASITRAYSQTPN 642
Query: 405 YEKIVPALLT-DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
Y+ +VP LL +GV + TC GIP+ PMLA+PT G+S+++++FQD+EFTCEYKYDG
Sbjct: 643 YDTLVPLLLKENGVDTILETCKLRVGIPVKPMLAQPTNGISQVLDRFQDLEFTCEYKYDG 702
Query: 464 ERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQK 523
ER QIH +DG V+IY+RN E TGK+PD++ + + V++F+LDCE VA+D +K
Sbjct: 703 ERVQIHRHDDGKVKIYTRNLEDYTGKYPDIIANIPKFMGSEVKNFILDCEAVAFDPTNKK 762
Query: 524 ILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG 583
ILPFQ LS+R RK VSL IK+ VC++AFD+LY NG L+ EQL RRE L +F E G
Sbjct: 763 ILPFQILSSRPRKGVSLDQIKIPVCVFAFDLLYLNGTSLIDEQLSRRREVLKSNFNESEG 822
Query: 584 FFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE 643
F +A D+ EIQ +++ AV A+CEGL++KT + YEPSKRS NWLK+KKDY++
Sbjct: 823 VFSYAQYSNISDVAEIQAYIEEAVKANCEGLMVKTFKEKSIYEPSKRSYNWLKIKKDYLK 882
Query: 644 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSS 703
+ DS+D+VPI A++G+GKRTGVYGA+LLACYD +NE+FQ++CKIGTGFS+ L++ +
Sbjct: 883 GMTDSVDIVPIGAWYGKGKRTGVYGAYLLACYDEDNEDFQTLCKIGTGFSDEQLQQFTEQ 942
Query: 704 LRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
L +I P+ YR ++ + PDVWF P + E + SI
Sbjct: 943 LTPHIIQNPKNMYRVSEQLKPDVWFSPKQVWEVLAADLSI 982
>gi|194754293|ref|XP_001959430.1| GF12871 [Drosophila ananassae]
gi|190620728|gb|EDV36252.1| GF12871 [Drosophila ananassae]
Length = 749
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 276/617 (44%), Positives = 390/617 (63%), Gaps = 18/617 (2%)
Query: 130 PIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAE--LKSNIVLLKKKAGEFDPKM------ 181
P+ + E++P + K + + + A K+ L S K+ A +DP
Sbjct: 57 PMTKDTENKPAAANDAKNESDTENKEADRKVTTIGLVSTSKDGKEDAENYDPSKDSYHPL 116
Query: 182 -VACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAAN 240
A W + P++ L+ F +I GR+ + D + N +VM +P DLVP VYL+ N
Sbjct: 117 KNAYWASKKVTPYLALARTFQVIEETKGRLKMIDTLSNYFCSVMLVSPSDLVPSVYLSIN 176
Query: 241 KIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
++APA+EGLELG+ + +++KA+ +A GR +H+K Q Q +GDLG+VA+ SR SQ MM +P
Sbjct: 177 QLAPAYEGLELGVAETTLMKAICKATGRNLAHIKSQTQLIGDLGIVAEQSRVSQRMMFQP 236
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
PL I VF R IAK +G + K + + + V+ E ++ IR L KLRIG+AE
Sbjct: 237 APLNIRDVFRKLREIAKISG----QSKMDLVYNVFVSCRSSEARFFIRSLIGKLRIGIAE 292
Query: 361 QTLLAALGQAAVYNEQ-----HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTD 415
Q+LL AL A V SK P + + E ++K +S P Y+ I+PA+L
Sbjct: 293 QSLLTALAIALVKKNHIGDCKASKVPEAYKDEIAETTLLLKTAYSQCPNYDIIIPAILEY 352
Query: 416 GVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS 475
+ L C PG+P+ PMLA+PTKGV E+ +F M TCE+KYDGERAQIH E G
Sbjct: 353 DIKELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGGMHITCEWKYDGERAQIHCNEKGE 412
Query: 476 VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
+ I+SRN+E NT K+PD++ K V S+++D EIVA+D E+++ILPFQ LSTR R
Sbjct: 413 ISIFSRNSENNTAKYPDLIARSKNFLKCPVESYIIDSEIVAWDVERKQILPFQVLSTRKR 472
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
KNV + +IKV VC+Y FD+LY NG L+ + L RR+ L + F+E G +QFAT L + D
Sbjct: 473 KNVDIEEIKVQVCVYIFDLLYINGTALVTKPLSERRKLLNEHFQEVEGEWQFATALNTND 532
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+DE+Q+FL+ +V +CEGL++KT+D++ATYE +KRS NWLKLKKDYI ++GDSLDLV I
Sbjct: 533 IDEVQQFLEESVKGNCEGLMVKTLDQEATYEIAKRSRNWLKLKKDYISNVGDSLDLVVIG 592
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
+ G+GKRTG YG FLLACYD+ NEE+Q+ICKIGTGF++ L+ S L VI + Y
Sbjct: 593 GYKGKGKRTGTYGGFLLACYDTENEEYQTICKIGTGFTDEDLQTHSEFLGKHVISSAKSY 652
Query: 716 YRFADTISPDVWFEPTE 732
YR+ ++ PD WFEP +
Sbjct: 653 YRYDSSLEPDHWFEPVQ 669
>gi|363745059|ref|XP_003643178.1| PREDICTED: DNA ligase 1-like [Gallus gallus]
Length = 775
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/564 (47%), Positives = 375/564 (66%), Gaps = 12/564 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW G VP++ ++ F+ I + R+ I +I+ N+LR+V+ +P +L+P +
Sbjct: 131 YHPVQDACWGHGRSVPYLAVARTFERIEEASSRLKIIEILTNLLRSVVALSPSELLPCLL 190
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N+ EGLELGIG+ + +ALA+A GR + ++ + Q+ GDLGLVA++SR +Q
Sbjct: 191 LCLNRPGAPSEGLELGIGETLLTRALAQATGRQLAQIRSEAQDKGDLGLVAESSRCTQRT 250
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
+ P PL+ + V R +A +G S KK + IK L VA E +YL+R L KLRI
Sbjct: 251 VVPPAPLSASGVLGKLREMAAMSGNASASKKIDIIKGLFVACRHSEARYLVRSLSGKLRI 310
Query: 357 GLAEQTLLAALGQA------------AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++L AL A AV + S P ++ LEE ++I+KQ F LP
Sbjct: 311 GLAEQSVLTALAHAIALTPPGQEWPLAVVDAGQSMAPDARRTWLEEQSRILKQTFCELPD 370
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y IVP LL G+ L C TPG+P+ PMLA+P + VSE++ +F++ FTCEYKYDGE
Sbjct: 371 YAAIVPVLLEHGLEQLPKHCGITPGVPLKPMLAQPARCVSELLKRFEEAAFTCEYKYDGE 430
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
R QIH LE G+V IYSRN E T K+PD+V + ++ KP VRS +LD E VA+D+ +++
Sbjct: 431 RTQIHVLESGAVFIYSRNQENTTSKYPDLVQRIPKMLKPGVRSCILDAEAVAWDKVTKQL 490
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L TR RK+V + IKV VC+YAFD+LY NG+PL++E L RR+ L SFEE G
Sbjct: 491 QPFQVLMTRKRKDVDAAAIKVQVCVYAFDLLYLNGEPLVREPLATRRQLLRQSFEEVEGE 550
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT++ + DE+ FLD A+ ASCEGL++KT++ +ATYE +KRS WLKLKKDY++
Sbjct: 551 FLFATSMDTRSADEVSDFLDKAIKASCEGLMVKTLEVEATYEIAKRSHKWLKLKKDYLDG 610
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ G+GKR G+YG FLLACYD +EE+QSICKIGTGF+E LE+ + L
Sbjct: 611 LGDTLDLVVIGAYLGKGKRAGIYGGFLLACYDEESEEYQSICKIGTGFTEESLEKHYNFL 670
Query: 705 RSKVIPKPRPYYRFADTISPDVWF 728
+ V+ +PRPYYR+ + ++PD W
Sbjct: 671 KEHVLTQPRPYYRWDNAVAPDRWL 694
>gi|194885762|ref|XP_001976489.1| GG22898 [Drosophila erecta]
gi|190659676|gb|EDV56889.1| GG22898 [Drosophila erecta]
Length = 747
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 277/642 (43%), Positives = 401/642 (62%), Gaps = 34/642 (5%)
Query: 120 VKPISNQIDNPIDSEKESQPTPPSPKKRK-------------VNVNSVSAKEKIAELKSN 166
V+P+S +DSE+++ P K+ K + +NS SA K +
Sbjct: 53 VEPMS------VDSEEKASPVKNVKKEPKDVEDRITDKKVTTIGLNSTSAS------KED 100
Query: 167 IVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMET 226
+ A + P A W+ + P++ L+ F +I GR+ + D + N +VM
Sbjct: 101 MENYDPSADSYHPLKNAYWKDKKVTPYLALARTFQVIEETKGRLKMIDTLSNFFCSVMLV 160
Query: 227 TPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLV 286
+PEDLVP VYL+ N++APA+EGLELG+ + +++KA+ +A GR +H+K Q +GDLG+V
Sbjct: 161 SPEDLVPSVYLSINQLAPAYEGLELGVAETTLMKAICKATGRNLAHIKSQTHLIGDLGIV 220
Query: 287 AKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYL 346
A+ SR SQ MM +P PL + VF R IAK +G + K + + + VA E ++
Sbjct: 221 AEQSRVSQRMMFQPAPLNVRDVFRKLREIAKISG----QSKMDLVYNMFVACRSSEARFF 276
Query: 347 IRLLQSKLRIGLAEQTLLAALGQAAVYNEQ-----HSKPPPNIQSPLEEAAKIVKQVFSV 401
IR L KLRIG+AEQ+LL AL V SK P + + E ++K +
Sbjct: 277 IRSLIGKLRIGIAEQSLLTALAIGLVKKNHIDECKASKVPEVYKDEIAETTLLLKTAYCQ 336
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
P Y+ I+PA+L + L + C PG+P+ PMLA+PTKGV E+ +F M+ TCE+KY
Sbjct: 337 CPNYDIIIPAILKYDIKELQDRCPMHPGMPLRPMLAQPTKGVHEVFERFGGMQITCEWKY 396
Query: 462 DGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK 521
DGERAQIH E G + I+SRN+E NT K+PD++ + L K V+S+++D EIVA+D E+
Sbjct: 397 DGERAQIHRNEKGEISIFSRNSENNTAKYPDLIARSTGLLKGDVQSYIIDSEIVAWDVER 456
Query: 522 QKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEE 581
++ILPFQ LSTR RKNV + +IKV VC+Y FD+LY NG L+ + L RR+ L + F+E
Sbjct: 457 KQILPFQVLSTRKRKNVDIEEIKVQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEV 516
Query: 582 PGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDY 641
G ++FAT L + D+DE+Q+FL+ ++ +CEGL++KT+D +ATYE +KRS NWLKLKKDY
Sbjct: 517 EGEWKFATALDTNDIDEVQQFLEESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDY 576
Query: 642 IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERS 701
+ ++GDSLDLV I + G+G+RTG YG FLLACYD+ NEE+QSICKIGTGF++ L+ S
Sbjct: 577 LSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLACYDTENEEYQSICKIGTGFTDEDLQTHS 636
Query: 702 SSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
L V + YYR+ ++ PD WFEP + E + S+
Sbjct: 637 EFLGKHVTDTAKSYYRYDQSLEPDHWFEPVQVWEVKCADLSL 678
>gi|24762424|ref|NP_611843.2| DNA ligase I [Drosophila melanogaster]
gi|75027832|sp|Q9W1H4.2|DNLI1_DROME RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; Short=DmDNA
Lig I
gi|23240139|gb|AAF47090.3| DNA ligase I [Drosophila melanogaster]
gi|54650818|gb|AAV36988.1| LD20955p [Drosophila melanogaster]
Length = 747
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 285/679 (41%), Positives = 417/679 (61%), Gaps = 27/679 (3%)
Query: 78 NSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDNPIDSEKES 137
+++ S S PKK +D +T + E A + V+P+S +DSE+++
Sbjct: 14 DATDSPSPPKKVPKIDAKTELPDEPHIK---SESASPETKPKVEPMS------VDSEEKT 64
Query: 138 QPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKK--------AGEFDPKMVACWEKGE 189
P + KK V+ + +K+ + N K+ A + P A W+ +
Sbjct: 65 SPVK-NVKKEPKEVDDKTTDKKVTTIGLNSTAATKEDVENYDPSADSYHPLKNAYWKDKK 123
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
P++ L+ F +I GR+ + D + N +VM +PEDLVP VYL+ N++APA+EGL
Sbjct: 124 VTPYLALARTFQVIEETKGRLKMIDTLSNFFCSVMLVSPEDLVPSVYLSINQLAPAYEGL 183
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+ + +++KA+ +A GR +H+K Q Q GDLG+VA+ SR SQ MM +P PL + VF
Sbjct: 184 ELGVAETTLMKAICKATGRNLAHIKSQTQLTGDLGIVAEQSRVSQRMMFQPAPLNVRDVF 243
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK +G + K + + + VA E ++ IR L KLRIG+AEQ+LL AL
Sbjct: 244 RKLREIAKLSG----QSKMDLVYNMFVACRSSEARFFIRSLIGKLRIGIAEQSLLTALAI 299
Query: 370 AAVYNEQ-----HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
V SK P + + + ++K + P Y+ I+PA+L + L C
Sbjct: 300 GLVKKNHIDDCKASKVPDVYKDEIVDTTLLLKTAYCQCPNYDIIIPAILKYDIKELQERC 359
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
PG+P+ PMLA+PTKGV E+ +F M+ TCE+KYDGERAQIH E G + I+SRN+E
Sbjct: 360 PMHPGMPLRPMLAQPTKGVHEVFERFGGMQITCEWKYDGERAQIHRNEKGEISIFSRNSE 419
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
NT K+PD++ + L K V+S+++D EIVA+D E+++ILPFQ LSTR RKNV + +IK
Sbjct: 420 NNTAKYPDLIARSTALLKGDVKSYIIDSEIVAWDVERKQILPFQVLSTRKRKNVDIEEIK 479
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
V VC+Y FD+LY NG L+ + L RR+ L + F+E G ++FAT L + D+DE+Q+FL+
Sbjct: 480 VQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLE 539
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
++ +CEGL++KT+D +ATYE +KRS NWLKLKKDY+ ++GDSLDLV I + G+G+RT
Sbjct: 540 ESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRT 599
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
G YG FLLACYD+ NEE+QSICKIGTGF++ L+ S L V + YYR+ ++ P
Sbjct: 600 GTYGGFLLACYDTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYRYDPSLEP 659
Query: 725 DVWFEPTERPETSNSPASI 743
D WFEP + E + S+
Sbjct: 660 DHWFEPVQVWEVKCADLSL 678
>gi|355755991|gb|EHH59738.1| hypothetical protein EGM_09925 [Macaca fascicularis]
Length = 1014
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 274/626 (43%), Positives = 390/626 (62%), Gaps = 71/626 (11%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 309 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 368
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 369 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 428
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 429 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 488
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLA Q++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 489 GLAGQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 548
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 549 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 608
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 609 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 668
Query: 525 LPFQTLSTRARK--------------------------------------NVSLSDIKVD 546
PFQ L+TR RK V S+I+V
Sbjct: 669 QPFQVLTTRKRKVASPAPLPAKAPYFLIFRPVLAVGPAQCPEGQSVSLDAEVDASEIQVQ 728
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC+YAFD++Y NG+ L++E L RR+ L ++F E G F FAT+L + D+++I +FL+ +
Sbjct: 729 VCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQS 788
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
V SCEGL++KT+D DATYE +KRS NWLKLKKDY++ +GD+LDLV I A+ GRGKR G
Sbjct: 789 VKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGR 848
Query: 667 YGAFLLACYDSNNEEFQSICK---------------------IGTGFSEAMLEERSSSLR 705
YG FLLA YD ++EE Q+ICK +GTGFS+ LEE SL+
Sbjct: 849 YGGFLLASYDEDSEELQAICKLPTSLVFCGYCIDQKAVGAMSLGTGFSDEELEEHHQSLK 908
Query: 706 SKVIPKPRPYYRFADTISPDVWFEPT 731
+ V+P PRPY R ++PD W +P+
Sbjct: 909 ALVLPSPRPYVRIDGAVTPDHWLDPS 934
>gi|134080257|emb|CAK97160.1| unnamed protein product [Aspergillus niger]
Length = 884
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 278/555 (50%), Positives = 374/555 (67%), Gaps = 12/555 (2%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 248 WKAGDPVPYAALCTTFSLIEMTTKRLVILAHCSLFLRQVLRLTPQDLLPTVQLMINKLAA 307
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 308 DYAGIELGIGESLIMKAIGESTGRSLAVIKTDQHEIGDLGLVAAKSRSNQPTMFKPKPLT 367
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALL-VAATDCEPQYLIRLLQSKLRIGLAEQTL 363
+ V + IAK G SQ+KK + IK LL A +Y++R L+ KLR+GLAE+T+
Sbjct: 368 VRGVHEGLLGIAKVQGHGSQDKKISGIKKLLSAADAATAAKYIVRFLEGKLRLGLAEKTV 427
Query: 364 LAALGQAAVYNEQ----HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN 419
L AL QA V +E H P L E I+K V+S LP YE I+PA+L G+ N
Sbjct: 428 LVALAQAVVAHEAAMEGHKTPSAE---KLAEGEAILKTVYSELPAYEVIIPAILEHGLSN 484
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLE-DGSVEI 478
L C PGIP+ PMLAKPTK ++E++++F+ EFTCEYKYDGERAQIHY + G I
Sbjct: 485 LPKVCKLQPGIPLKPMLAKPTKSITEVLDRFEGKEFTCEYKYDGERAQIHYKDAKGLSAI 544
Query: 479 YSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+SRN+E + K+PDV+ + K V+SFVLDCE VA+D E +K+LPFQ L TR RK+V
Sbjct: 545 FSRNSEDLSKKYPDVLAKLDGWIKEGVQSFVLDCETVAWDTENKKVLPFQQLMTRKRKDV 604
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
D+KV VCI+AFD+L+ NG+P +++ LR RRE L++SF+ G FQFA + LDE
Sbjct: 605 KAEDVKVKVCIFAFDLLFLNGEPTVKKSLRERRELLHESFQVTEGEFQFAQYGNTNVLDE 664
Query: 599 IQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAF 657
IQ LD +V ASCEGL++K +D ++ YEPSKRS NWLK+KKDY+ +GDSLDLV + A+
Sbjct: 665 IQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAY 724
Query: 658 HGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYR 717
HGRGKRT VYGAFLLA Y+S+ + +++IC IGTGFSEA+LEE ++L I +P+P+Y
Sbjct: 725 HGRGKRTSVYGAFLLAAYNSSTQTYETICNIGTGFSEAVLEEFYNALSPLTIDRPKPFYS 784
Query: 718 FADT--ISPDVWFEP 730
++ PDVWFEP
Sbjct: 785 HSNVPKDQPDVWFEP 799
>gi|195347251|ref|XP_002040167.1| GM16058 [Drosophila sechellia]
gi|194135516|gb|EDW57032.1| GM16058 [Drosophila sechellia]
Length = 747
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 285/679 (41%), Positives = 418/679 (61%), Gaps = 27/679 (3%)
Query: 78 NSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDNPIDSEKES 137
+++ S S PKK +D +T + E A + V+P+S +DSE+++
Sbjct: 14 DATDSPSPPKKVPKIDAKTELPDEPHIK---SESASPETKPKVEPMS------VDSEEKT 64
Query: 138 QPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGE--------FDPKMVACWEKGE 189
P K+ K V+ + K K+ + N K+ E + P A W+ +
Sbjct: 65 SPVKNVKKEPKDTVDKTTDK-KVTTIGLNSTSASKEDAENYDPSADSYHPLKNAYWKDKK 123
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
P++ L+ F +I GR+ + D + N +VM +PEDL+P VYL+ N++APA+EGL
Sbjct: 124 VTPYLALARTFQVIEETKGRLKMIDTLSNFFCSVMLVSPEDLLPSVYLSINQLAPAYEGL 183
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+ + +++KA+ +A GR +H+K Q Q +GDLG+VA+ SR SQ MM +P PL + VF
Sbjct: 184 ELGVAETTLMKAICKATGRNLAHIKSQTQLIGDLGIVAEQSRVSQRMMFQPAPLNVRDVF 243
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK +G + K + + + VA E ++ IR L KLRIG+AEQ+LL AL
Sbjct: 244 RKLREIAKISG----QSKMDLVYNMFVACRLSEARFFIRSLIGKLRIGIAEQSLLTALAI 299
Query: 370 AAVYNEQ-----HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
V SK P + + + ++K + P Y+ I+PA+L + L C
Sbjct: 300 GLVKKNHIDDCKASKVPEVYKDEIADTTLLLKTAYCQCPNYDIIIPAILKYDIKELQERC 359
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
PG+P+ PMLA+PTKGV E+ +F M+ TCE+KYDGERAQIH E G + I+SRN+E
Sbjct: 360 PMHPGMPLRPMLAQPTKGVHEVFERFGGMQITCEWKYDGERAQIHRNEKGEISIFSRNSE 419
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
NT K+PD++ + L K V+S+++D EIVA+D E+++ILPFQ LSTR RKNV + +IK
Sbjct: 420 NNTAKYPDLIARSTGLLKGDVKSYIIDSEIVAWDVERKQILPFQVLSTRKRKNVDIEEIK 479
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
V VC+Y FD+LY NG L+ + L RR+ L + F+E G ++FAT L + D+DE+Q+FL+
Sbjct: 480 VQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLE 539
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
++ +CEGL++KT+D +ATYE +KRS NWLKLKKDY+ ++GDSLDLV I + G+G+RT
Sbjct: 540 ESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRT 599
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
G YG FLLACYD+ NEE+QSICKIGTGF++ L+ S L V + YYR+ ++ P
Sbjct: 600 GTYGGFLLACYDTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYRYDPSLEP 659
Query: 725 DVWFEPTERPETSNSPASI 743
D WFEP + E + S+
Sbjct: 660 DHWFEPVQVWEVKCADLSL 678
>gi|260801006|ref|XP_002595387.1| hypothetical protein BRAFLDRAFT_69217 [Branchiostoma floridae]
gi|229280633|gb|EEN51399.1| hypothetical protein BRAFLDRAFT_69217 [Branchiostoma floridae]
Length = 952
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 271/564 (48%), Positives = 360/564 (63%), Gaps = 46/564 (8%)
Query: 174 AGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP 233
A F PK E + VP++ L+ F+ I R+ IT+I+CN R+V+ TP+DLV
Sbjct: 344 AAFFKPKQ----EADKTVPYLALAKTFEAIEEVRARLKITEILCNFFRSVIALTPDDLVQ 399
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS 293
VYL NK+ PA+EGLELGIG+ ++KA+AEA GR + +K QE GDLG+VA+
Sbjct: 400 CVYLCLNKVGPAYEGLELGIGETVLMKAIAEATGRKMAQIKTDAQEKGDLGIVAEV---- 455
Query: 294 QSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSK 353
KK N IK + VA E +YLIR L K
Sbjct: 456 ------------------------------MTKKINFIKGMFVACRQSEARYLIRSLGGK 485
Query: 354 LRIGLAEQTLLAALGQAA--------VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVY 405
LRIGLAEQ++L AL AA V + K ++ LE+AA I+K + +P Y
Sbjct: 486 LRIGLAEQSVLTALAHAATLTPAGKDVLDAGKGKSSDALKKKLEDAALILKTTYCEMPNY 545
Query: 406 EKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGER 465
+ ++ A+L G+ L C TPG P+ PMLA PTKGVSE++ +F+ EFTCEYKYDGER
Sbjct: 546 DAVISAMLKHGLEELPKHCKLTPGTPLKPMLAHPTKGVSEVLRRFEGAEFTCEYKYDGER 605
Query: 466 AQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKIL 525
AQIH LE+G + IYSRN E NT K+PD++ + ++ V S ++D E VA+D E +KIL
Sbjct: 606 AQIHMLENGEIHIYSRNQENNTSKYPDIIERMPKVNHDDVTSCIIDSEAVAWDPENKKIL 665
Query: 526 PFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFF 585
PFQ LSTR RK+ S+IKV VC+YAFD+LY NGQ L++E R RRE L +SF E G F
Sbjct: 666 PFQVLSTRKRKDADQSEIKVQVCVYAFDLLYLNGQSLVREPFRKRREMLRESFNEVEGEF 725
Query: 586 QFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESI 645
FAT++ S + +EI FLDA++ SCEGL++KT+D+DATYE +KRS NWLKLKKDY++ +
Sbjct: 726 VFATSMVSGNTEEIAVFLDASIKDSCEGLMVKTLDKDATYEIAKRSHNWLKLKKDYLDGV 785
Query: 646 GDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR 705
GD+LD+VPI F G GKRTG YG FLLACY +EEFQSICKIGTGF + LE+ + +
Sbjct: 786 GDTLDVVPIGGFLGTGKRTGKYGGFLLACYSEEDEEFQSICKIGTGFKDEELEQHTEFFK 845
Query: 706 SKVIPKPRPYYRFADTISPDVWFE 729
+ V+ KP+ YYR+ ++ PD WF+
Sbjct: 846 NHVVDKPKSYYRYDSSVEPDHWFD 869
>gi|355703720|gb|EHH30211.1| hypothetical protein EGK_10828 [Macaca mulatta]
Length = 1014
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 274/626 (43%), Positives = 390/626 (62%), Gaps = 71/626 (11%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 309 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 368
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 369 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 428
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 429 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 488
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLA Q++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 489 GLAGQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 548
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 549 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 608
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 609 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 668
Query: 525 LPFQTLSTRARK--------------------------------------NVSLSDIKVD 546
PFQ L+TR RK V S+I+V
Sbjct: 669 QPFQVLTTRKRKVASPAPLPAKAPYFLIFRPVLAVGPAQCPEGQSVSLDAEVDASEIQVQ 728
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC+YAFD++Y NG+ L++E L RR+ L ++F E G F FAT+L + D+++I +FL+ +
Sbjct: 729 VCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQS 788
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
V SCEGL++KT+D DATYE +KRS NWLKLKKDY++ +GD+LDLV I A+ GRGKR G
Sbjct: 789 VKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGR 848
Query: 667 YGAFLLACYDSNNEEFQSICK---------------------IGTGFSEAMLEERSSSLR 705
YG FLLA YD ++EE Q+ICK +GTGFS+ LEE SL+
Sbjct: 849 YGGFLLASYDEDSEELQAICKLPTSLVFCGYCIDQKAVGAMSLGTGFSDEELEEHHQSLK 908
Query: 706 SKVIPKPRPYYRFADTISPDVWFEPT 731
+ V+P PRPY R ++PD W +P+
Sbjct: 909 ALVLPSPRPYVRIDGAVTPDHWLDPS 934
>gi|310793139|gb|EFQ28600.1| DNA ligase I [Glomerella graminicola M1.001]
Length = 887
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 276/601 (45%), Positives = 388/601 (64%), Gaps = 39/601 (6%)
Query: 167 IVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMET 226
+V +K K DP W+ GE VP+ L F +I T R+ I LR V+
Sbjct: 207 VVQMKLKTQTKDP--YPDWKPGEPVPYAALCTTFSLIELTTKRLEIMAHCSLFLRQVLRL 264
Query: 227 TPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLV 286
TP+DL+P V L NK+AP + G+ELGIG++ I+KA+ E GR+ + +K+ +E+GDLGLV
Sbjct: 265 TPDDLLPTVLLMINKLAPDYAGIELGIGESLIMKAIGETTGRSLAVIKQDQKEIGDLGLV 324
Query: 287 AKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD------ 340
A SRS+Q M KP LTI V + IA +G +Q +K + IK LL AA
Sbjct: 325 AVKSRSTQPTMFKPKALTIRGVHNGLMGIATVSGNGAQGRKVDAIKKLLSAADSRSSGKV 384
Query: 341 ---------CEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEA 391
E +YL+R L+ KLR+GLAE+T+L +L QA V++E +K + +E+A
Sbjct: 385 DISKDKGGPSEAKYLVRFLEGKLRLGLAERTVLVSLAQAVVFHEADAKGQVPKTTDVEQA 444
Query: 392 AKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ 451
I+K V+S LP Y+ I+PA++ G+ NL C PG+P+ PMLAKPTK ++E++++F+
Sbjct: 445 EAILKTVYSELPSYDVIIPAMVNHGIMNLREHCKLKPGVPLKPMLAKPTKAITEVLDRFE 504
Query: 452 DMEFTCEYKYDGERAQIHYLE-------------------DGSVEIYSRNAERNTGKFPD 492
+ FTCEYKYDGERAQIHY+ DG I+SRN+E + K+PD
Sbjct: 505 NQTFTCEYKYDGERAQIHYVAKSADEEISQSLPGAAKSAADGVASIFSRNSEDLSKKYPD 564
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAF 552
++ + K RSFVLDCE VA+D +++K+LPFQ L TR +K+V + D+KV VC++AF
Sbjct: 565 ILAKLHTWVKADTRSFVLDCETVAWDVDEKKVLPFQQLMTRKKKDVKIEDVKVKVCVFAF 624
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCE 612
D+LY NGQ ++++ LR RRE L ++FE G F FAT + +L++IQ FLD +V ASCE
Sbjct: 625 DLLYLNGQAIVEKSLRERRELLENAFEPVEGEFSFATHMNGQELEQIQVFLDESVKASCE 684
Query: 613 GLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
GL++K +D ++ YEPSKRS NWLK+KKDY+ IGDSLDLV + A++G+GKRT VYGAFL
Sbjct: 685 GLMVKMLDGTESGYEPSKRSRNWLKIKKDYLSGIGDSLDLVVLGAYYGKGKRTSVYGAFL 744
Query: 672 LACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD--TISPDVWFE 729
LACY+ ++E ++++C IGTGFSEA+LEE L VI +P+P+Y + PDVWFE
Sbjct: 745 LACYNPSSESYETVCNIGTGFSEAVLEELHKQLSDIVIDRPKPFYAHSSGGQHQPDVWFE 804
Query: 730 P 730
P
Sbjct: 805 P 805
>gi|389639142|ref|XP_003717204.1| DNA ligase 1 [Magnaporthe oryzae 70-15]
gi|351643023|gb|EHA50885.1| DNA ligase 1 [Magnaporthe oryzae 70-15]
gi|440475490|gb|ELQ44160.1| DNA ligase 1 [Magnaporthe oryzae Y34]
gi|440485387|gb|ELQ65353.1| DNA ligase 1 [Magnaporthe oryzae P131]
Length = 896
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/583 (46%), Positives = 385/583 (66%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F ++ T R++I + LR V++ TPEDL+P V L NK+A
Sbjct: 232 WKPGEPVPYAALCTTFSLVELTTKRLIIIEHCSRFLRQVLKLTPEDLLPTVLLMINKLAA 291
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K+ +E+GDLGLVA SRS+Q M KP PLT
Sbjct: 292 DYAGIELGIGESLIMKAIGESTGRSLAIIKQDQREIGDLGLVAVKSRSTQPTMFKPKPLT 351
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA---------------TDCEPQYLIRL 349
+ VF IA G +Q +K + IK LL AA E ++++R
Sbjct: 352 VRGVFAGLTNIATITGNGAQGRKVDIIKKLLSAADVNNAGKVDISKDKGGPSEAKFIVRF 411
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
L+ KLR+GLAE+T+L +L QA + +E K S +E+A +++K V+S LP YE I+
Sbjct: 412 LEGKLRLGLAERTVLPSLAQAVIAHESSKKGTIPSTSDVEKAEQMLKTVYSELPSYEVII 471
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PALL G+ NL + C PGIP+ PMLAKPTK ++E++++F++ FTCEYKYDGERAQIH
Sbjct: 472 PALLEHGIMNLKDNCKLRPGIPLKPMLAKPTKAITEVLDRFENQTFTCEYKYDGERAQIH 531
Query: 470 YLE-------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
Y+ G I+SRN+E + K+PD++ + KP +SFVL
Sbjct: 532 YVAKEANEELSTALPGATKAVGSGLAAIFSRNSEDLSQKYPDILAKLDSWVKPETKSFVL 591
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D +++K+LPFQ L TR +K+V + D+KV VC++AFD+LY NG+ ++++ LR R
Sbjct: 592 DCETVAWDVQEKKVLPFQQLMTRKKKDVKIEDVKVKVCVFAFDLLYLNGEAVVEKSLRER 651
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSK 629
R L SF+ G F +AT + +LDEIQ FLD +V ASCEGL++K +D ++ YEPSK
Sbjct: 652 RTLLESSFKPIEGEFAYATHMNGQELDEIQTFLDESVKASCEGLMVKMLDGTESGYEPSK 711
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ IGDSLDLV + A++G+GKRT VYGAFLLACY+ ++++++++C IG
Sbjct: 712 RSRNWLKIKKDYLSGIGDSLDLVVLGAYYGKGKRTSVYGAFLLACYNPSSDKYETVCNIG 771
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRFAD--TISPDVWFEP 730
TGFSEA+LEE + L+ VI +P+P+Y + PDVWFEP
Sbjct: 772 TGFSEAVLEELHTQLKDTVIDRPKPFYSHSSGGQHQPDVWFEP 814
>gi|212532871|ref|XP_002146592.1| DNA ligase Cdc9, putative [Talaromyces marneffei ATCC 18224]
gi|210071956|gb|EEA26045.1| DNA ligase Cdc9, putative [Talaromyces marneffei ATCC 18224]
Length = 862
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 298/721 (41%), Positives = 431/721 (59%), Gaps = 58/721 (8%)
Query: 55 SSAPNAFQVLMSAAAKKKPSPQPNSSSSS----SSPKKRRTLDTQTPKTTNSVVGEKIQE 110
+SA N + K+ S + S S ++ K+R+ + P+ + +
Sbjct: 69 ASAANNGSTSPTKGVKRDQSAEAEESDDSDIQPATKKRRKNAKSPRPRKSAKEI------ 122
Query: 111 VAEEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLL 170
VAE PS+ V ++ P++ + + PS + + K++I ++++ +
Sbjct: 123 VAERPSSPKVSKKASGEVTPVEEDADEPAEDPSASEEDEDEKPEIKKKQIEKVQATL--- 179
Query: 171 KKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPED 230
K+ DP W+ GE VP+ L F +I T R++I LR V+ TPED
Sbjct: 180 --KSTGNDP--YPDWKAGEPVPYAALCTTFSLIEMTTKRLIILAHASLFLRQVLRLTPED 235
Query: 231 LVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKAS 290
L+P V L NK+A + G+ELGIG++ I+KA+ E GR+ + +K E+GDLGLVA S
Sbjct: 236 LLPTVQLMINKLAADYSGIELGIGESLIMKAIGETTGRSLAVIKADQHEIGDLGLVAAKS 295
Query: 291 RSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC--------- 341
RS+Q M KP PLT+ V + IAK G SQ+KK + IK LL AA
Sbjct: 296 RSNQPTMFKPKPLTVRGVHEGLLAIAKVQGHGSQDKKISGIKKLLSAADAATAGKGAKGI 355
Query: 342 ----------EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP-LEE 390
E ++LIR L+ KLR+GLAE+T+L AL QA V +E + + + L +
Sbjct: 356 DIKQNKGGPSEAKFLIRFLEGKLRLGLAEKTVLVALAQAVVAHEAELEGGKSASAERLAQ 415
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF 450
++KQV+S LP YE I+PA+L +G++NL + C PG+P+ PMLAKPTK ++E++N+F
Sbjct: 416 GESLLKQVYSELPAYEVIIPAMLKEGIFNLPDVCKLQPGVPLKPMLAKPTKSITEVLNRF 475
Query: 451 QDMEFTCEYKYDGERAQIHYLEDGSVE------------------IYSRNAERNTGKFPD 492
+ EFTCEYKYDGERAQIHY+ S+ I+SRN+E + K+PD
Sbjct: 476 EGKEFTCEYKYDGERAQIHYVSPDSIHQFPNAATTLQKDAKGLSSIFSRNSEDLSKKYPD 535
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAF 552
++ + KP V SFVLDCE VA+D +K+LPFQ L TR RK+V D+KV VC++AF
Sbjct: 536 ILAKLDTWIKPGVSSFVLDCETVAWDMANKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAF 595
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCE 612
D+L+ NG+P +++ LR RR+ L+++F+ G F FA + +LDEIQ L+ +V ASCE
Sbjct: 596 DLLFLNGEPTVKKSLRERRQLLHEAFQPTEGEFAFAQHSNTNELDEIQSLLEDSVKASCE 655
Query: 613 GLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
GL++K +D ++ YEPSKRS NWLK+KKDY++ +GDSLDLV + A+ GRGKRT VYGAFL
Sbjct: 656 GLMVKMLDTEESGYEPSKRSRNWLKVKKDYLQGLGDSLDLVVLGAYFGRGKRTSVYGAFL 715
Query: 672 LACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFE 729
LA Y+++ + F++IC IGTGFSEA+LEE L VI +P+P+Y + PDVWFE
Sbjct: 716 LAAYNASKQSFETICNIGTGFSEALLEELHKELSPLVIDRPKPFYEHSTVPKDQPDVWFE 775
Query: 730 P 730
P
Sbjct: 776 P 776
>gi|406601860|emb|CCH46521.1| DNA ligase 1 [Wickerhamomyces ciferrii]
Length = 768
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/549 (47%), Positives = 368/549 (67%), Gaps = 12/549 (2%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ + +F+ I + T R+ I + V++T P DL+P+ YL N++ P +EGLE
Sbjct: 161 IPYAAVVEIFEKIESTTKRLEIIKYTSDFFLKVLQTNPNDLIPITYLFINRLGPDYEGLE 220
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
LG+G+ +IK ++E+ G+ HVK +Y+E+GDLG VA +RS Q M KP PLT+ VFD
Sbjct: 221 LGLGETILIKTISESTGKNTQHVKAKYREIGDLGTVALQARSVQPTMFKPKPLTVDTVFD 280
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
+ I+K +GKDSQ KK N IK +L A+ E ++LIR L+SKLRIGLAE+T+L +L +A
Sbjct: 281 NLKQISKASGKDSQTKKINIIKRMLTASQGLEAKFLIRSLESKLRIGLAEKTVLISLAKA 340
Query: 371 AVYNEQ------HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
EQ + P++ EEA ++ F +P YE ++ + GV L + C
Sbjct: 341 LATFEQLNQGKKQERISPDLFIKAEEA---IRDAFCQVPNYEVLINTAIEHGVLKLGDHC 397
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
+ PGIP+ PMLAKPTK V E++++F EFTCEYKYDGERAQ+H L +G V++YSRN+E
Sbjct: 398 TLKPGIPLKPMLAKPTKSVGEVLDRFNGEEFTCEYKYDGERAQVHLLNNGEVKVYSRNSE 457
Query: 485 RNTGKFPDVVLAVSRLKKP--SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
+ ++PD++ +V KP +S +LDCE VA+DR +KILPFQ LSTR RK+VS D
Sbjct: 458 DMSQRYPDIIDSVKGFLKPDQDTKSLILDCEAVAWDRVDEKILPFQVLSTRKRKDVSTED 517
Query: 543 IKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
IKV VC++AFD+L N +PL+ + LR RR LY PG FQFAT+ + D+DE+Q F
Sbjct: 518 IKVQVCLFAFDMLCYNDEPLISKPLRERRNQLYKVLNPIPGKFQFATSKITSDVDELQTF 577
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
LD +V ++CEGL++KT+D D Y PS+RS +WLKLKKDY+E +GDSLDLV I A++GRGK
Sbjct: 578 LDESVKSACEGLMVKTLDSDP-YRPSQRSNSWLKLKKDYLEGVGDSLDLVVIGAYYGRGK 636
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
RTG YG FLLA Y+ ++ E+++ CKIGTGFS+ ML+ L I P+ + F +
Sbjct: 637 RTGTYGGFLLASYNQDSGEYETCCKIGTGFSDEMLKTLYEKLSKTEIEDPKSEFTFDSSA 696
Query: 723 SPDVWFEPT 731
PDVWFEP+
Sbjct: 697 EPDVWFEPS 705
>gi|402079070|gb|EJT74335.1| DNA ligase 1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 944
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 274/585 (46%), Positives = 381/585 (65%), Gaps = 41/585 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F ++ T R++IT+ LR V+ TP DL+P V L NK+A
Sbjct: 280 WKPGEPVPYAALCATFSLVELTTKRLIITEYCSLFLRQVLRLTPGDLLPTVLLMINKLAA 339
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K+ +E+GDLGLVA SRS+Q M KP PLT
Sbjct: 340 DYAGIELGIGESLIMKAIGESTGRSLAVIKQDQKEIGDLGLVAVKSRSTQPTMFKPKPLT 399
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA---------------TDCEPQYLIRL 349
+ V IA +G +Q +K + IK LL AA E +YL+R
Sbjct: 400 VRGVHTVLVGIATMSGNGAQGRKVDMIKKLLSAADVNLTGKVDITKDKGGPSEAKYLVRF 459
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP--LEEAAKIVKQVFSVLPVYEK 407
L+ KLR+GLAE+T+L +L QA + +E K N+ SP +E+A ++K V+S LP YE
Sbjct: 460 LEGKLRLGLAERTVLVSLAQAIIAHEATQKG--NVPSPSDVEKAEAMLKTVYSELPSYET 517
Query: 408 IVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQ 467
I+PA+L G+ NL C PGIP+ PMLAKPTK ++E++++F++ FTCEYKYDGERAQ
Sbjct: 518 IIPAVLEHGIMNLKENCKLRPGIPLKPMLAKPTKAITEVLDRFENQTFTCEYKYDGERAQ 577
Query: 468 IHYLED-------------------GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSF 508
IHY+ G I+SRN+E + K+PD++ + K +SF
Sbjct: 578 IHYVAKDADEELSQSLPGANKTTGAGVAAIFSRNSEDLSKKYPDILAKLHTWIKEDTKSF 637
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
VLDCE VA+D ++K+LPFQ L TR +K+V + D+KV VC++AFD+LY NG+ ++++ LR
Sbjct: 638 VLDCETVAWDVVEKKVLPFQQLMTRKKKDVKIEDVKVKVCVFAFDLLYLNGEAVVEKSLR 697
Query: 569 VRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEP 627
RRE L SFE G F AT + +LDEIQ FLD +V ASCEGL++K +D ++ YEP
Sbjct: 698 ERRELLAASFEPVEGEFALATHMNGRELDEIQTFLDESVKASCEGLMVKMLDGAESGYEP 757
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
SKRS NWLK+KKDY+ IGDSLDLV + A+HG+GKRT VYGAFLLACY+ +++ +++IC
Sbjct: 758 SKRSRNWLKIKKDYLSGIGDSLDLVVLGAYHGKGKRTSVYGAFLLACYNPSSDTYETICN 817
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD--TISPDVWFEP 730
IGTGFSEA+LEE S L+ VI +P+P+Y + PDVW EP
Sbjct: 818 IGTGFSEAVLEELHSQLKDTVIDRPKPFYSHSSGGQHQPDVWLEP 862
>gi|358369869|dbj|GAA86482.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Aspergillus
kawachii IFO 4308]
Length = 889
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 279/588 (47%), Positives = 379/588 (64%), Gaps = 43/588 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 218 WKAGDPVPYAALCTTFSLIEMTTKRLVILAHCSLFLRQVLRLTPQDLLPTVQLMINKLAA 277
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 278 DYAGIELGIGESLIMKAIGESTGRSLAVIKTDQHEIGDLGLVAAKSRSNQPTMFKPKPLT 337
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQY 345
+ V + IAK G SQ+KK + IK LL AA E +Y
Sbjct: 338 VRGVHEGLLGIAKVQGHGSQDKKISGIKKLLSAADAATAGKGSKGIDITKDKGGPSEAKY 397
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNE--QHSKPPPNIQSPLEEAAKIVKQVFSVLP 403
++R L+ KLR+GLAE+T+L AL QA V +E + P+ + L E I+K V+S LP
Sbjct: 398 IVRFLEGKLRLGLAEKTVLVALAQAVVAHEAAMEGQKTPSAEK-LAEGEAILKTVYSELP 456
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
YE I+PA+L G+ NL C PGIP+ PMLAKPTK ++E++++F+ EFTCEYKYDG
Sbjct: 457 AYEVIIPAILEHGLSNLPKVCKLQPGIPLKPMLAKPTKSITEVLDRFEGKEFTCEYKYDG 516
Query: 464 ERAQIHYLEDGSVE------------------IYSRNAERNTGKFPDVVLAVSRLKKPSV 505
ERAQIHY+ S+ I+SRN+E + K+PDV+ + K V
Sbjct: 517 ERAQIHYVAPDSIHQYPGATATLKKDSKGLSAIFSRNSEDLSKKYPDVLAKLDGWIKEGV 576
Query: 506 RSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQE 565
+SFVLDCE VA+D E +K+LPFQ L TR RK+V D+KV VC++AFD+L+ NG+P +++
Sbjct: 577 QSFVLDCETVAWDTENKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTVKK 636
Query: 566 QLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDAT 624
LR RRE L+DSF+ G FQFA + LDEIQ LD +V ASCEGL++K +D ++
Sbjct: 637 SLRERRELLHDSFQVTEGEFQFAQYGNTNVLDEIQTLLDDSVKASCEGLMVKMLDTEESG 696
Query: 625 YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQS 684
YEPSKRS NWLK+KKDY+ +GDSLDLV + A+HGRGKRT VYGAFLLA Y+S+ + +++
Sbjct: 697 YEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAYHGRGKRTSVYGAFLLAAYNSSTQTYET 756
Query: 685 ICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
IC IGTGFSEA+LEE ++L I +P+P+Y ++ PDVWFEP
Sbjct: 757 ICNIGTGFSEAILEEFYNALSPLTIDRPKPFYSHSNVPKDQPDVWFEP 804
>gi|429856550|gb|ELA31455.1| DNA ligase [Colletotrichum gloeosporioides Nara gc5]
Length = 901
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 269/583 (46%), Positives = 379/583 (65%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F +I T R+ I LR VM TP+DL+P V L NK+AP
Sbjct: 237 WKPGEPVPYAALCKTFSLIEMTTKRLEIMAHCSLFLRQVMRLTPDDLLPTVLLMINKLAP 296
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ + +K+ +E+GDLGLVA SRS+Q M KP LT
Sbjct: 297 DYAGIELGIGESLIMKAIGETTGRSLAIIKQDQKEIGDLGLVAVKSRSTQPTMFKPKALT 356
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
I V IA +G +Q +K + IK LL AA E +YL+R
Sbjct: 357 IRGVHKGLMGIATVSGNGAQGRKVDSIKKLLSAADAHNIGKVDITKDKGGPSEAKYLVRF 416
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
L+ KLR+GLAE+T+L +L QA Y+E +K + +E+A ++KQV+S LP Y+ I+
Sbjct: 417 LEGKLRLGLAEKTVLVSLAQAVTYHEADAKGQSPKTTDVEQAEAVLKQVYSELPSYDVII 476
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PA++ G+ NL C PG+P+ PMLAKPTK ++E++++F++ FTCEYKYDGERAQIH
Sbjct: 477 PAMVEHGIMNLREHCKLKPGVPLKPMLAKPTKAITEVLDRFENQTFTCEYKYDGERAQIH 536
Query: 470 YLE-------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
Y+ DG I+SRN+E + K+PD++ + KP +SFVL
Sbjct: 537 YVAKNADEELSQSLPGATQAAADGVASIFSRNSEDLSKKYPDILAKLHTWVKPDTKSFVL 596
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D +++K+LPFQ L TR +K+V + D+KV VC++AFD+LY NG+ ++++ LR R
Sbjct: 597 DCETVAWDVDEKKVLPFQQLMTRKKKDVKIEDVKVKVCVFAFDLLYLNGEAIVEKPLRER 656
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSK 629
RE L ++F G F AT + +L++IQ+FLD +V ASCEGL++K +D ++ YEPSK
Sbjct: 657 RELLENAFAPVEGEFALATHMNGQELEQIQEFLDESVKASCEGLMVKMLDGSESGYEPSK 716
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ IGDSLDLV + A+HG+GKRT VYGAFLLACY+ +++ ++++C IG
Sbjct: 717 RSRNWLKIKKDYLSGIGDSLDLVVLGAYHGKGKRTSVYGAFLLACYNPSSDSYETVCNIG 776
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRFAD--TISPDVWFEP 730
TGFSEA+LEE L VI P+P+Y + PDVWFEP
Sbjct: 777 TGFSEAVLEELHKQLSDIVIDLPKPFYAHSSGGQHQPDVWFEP 819
>gi|417405259|gb|JAA49345.1| Putative atp-dependent dna ligase i [Desmodus rotundus]
Length = 919
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/566 (47%), Positives = 385/566 (68%), Gaps = 12/566 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW++G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+P++Y
Sbjct: 273 YHPMHDACWKQGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPILY 332
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 333 LSLNCLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 392
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P LT + VF FR IA+ G S KK IK L VA E +++ R L +LR+
Sbjct: 393 MLPPPALTASGVFARFRDIARLTGSASTAKKIEIIKGLFVACRHSEARFIARALSGQLRL 452
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE ++KQ F +P
Sbjct: 453 GLAEQSVLAALAQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMVLKQTFCEVPD 512
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++IVP LL G+ L C +PGIP+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 513 LDRIVPVLLEHGLERLPEHCRLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 572
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH+LE G V+I+SRN E NTGK+PD++ ++K SV SF+LD E VA+DREK++I
Sbjct: 573 RAQIHFLEGGEVKIFSRNQEDNTGKYPDIISRTPKIKLQSVTSFILDAEAVAWDREKKQI 632
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V ++I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 633 QPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 692
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+D+I +FL+ +V SCEGL++KT+D ATYE +KRS NWLKLKKDY+
Sbjct: 693 FVFATSLDTKDMDQIAEFLEQSVKDSCEGLMVKTLDVHATYEIAKRSHNWLKLKKDYLNG 752
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRG+R G YG FLLACYD ++E Q+ICK+GTGFS+ LEE +L
Sbjct: 753 LGDTLDLVVIGAYLGRGRRAGRYGGFLLACYDEDSEGLQAICKLGTGFSDEELEEHHRNL 812
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEP 730
++ V+P PR Y + ++PD W EP
Sbjct: 813 QALVLPTPRSYVQADGAVAPDHWLEP 838
>gi|317033374|ref|XP_001395539.2| DNA ligase Cdc9 [Aspergillus niger CBS 513.88]
Length = 894
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/590 (47%), Positives = 377/590 (63%), Gaps = 47/590 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 223 WKAGDPVPYAALCTTFSLIEMTTKRLVILAHCSLFLRQVLRLTPQDLLPTVQLMINKLAA 282
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 283 DYAGIELGIGESLIMKAIGESTGRSLAVIKTDQHEIGDLGLVAAKSRSNQPTMFKPKPLT 342
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQY 345
+ V + IAK G SQ+KK + IK LL AA E +Y
Sbjct: 343 VRGVHEGLLGIAKVQGHGSQDKKISGIKKLLSAADAATAGKGSKGIDITKDKGGPSEAKY 402
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ----HSKPPPNIQSPLEEAAKIVKQVFSV 401
++R L+ KLR+GLAE+T+L AL QA V +E H P L E I+K V+S
Sbjct: 403 IVRFLEGKLRLGLAEKTVLVALAQAVVAHEAAMEGHKTPSAE---KLAEGEAILKTVYSE 459
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
LP YE I+PA+L G+ NL C PGIP+ PMLAKPTK ++E++++F+ EFTCEYKY
Sbjct: 460 LPAYEVIIPAILEHGLSNLPKVCKLQPGIPLKPMLAKPTKSITEVLDRFEGKEFTCEYKY 519
Query: 462 DGERAQIHYLEDGSVE------------------IYSRNAERNTGKFPDVVLAVSRLKKP 503
DGERAQIHY+ S+ I+SRN+E + K+PDV+ + K
Sbjct: 520 DGERAQIHYVAPDSIHQYPGATATLKKDAKGLSAIFSRNSEDLSKKYPDVLAKLDGWIKE 579
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLL 563
V+SFVLDCE VA+D E +K+LPFQ L TR RK+V D+KV VCI+AFD+L+ NG+P +
Sbjct: 580 GVQSFVLDCETVAWDTENKKVLPFQQLMTRKRKDVKAEDVKVKVCIFAFDLLFLNGEPTV 639
Query: 564 QEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RD 622
++ LR RRE L++SF+ G FQFA + LDEIQ LD +V ASCEGL++K +D +
Sbjct: 640 KKSLRERRELLHESFQVTEGEFQFAQYGNTNVLDEIQTLLDDSVKASCEGLMVKMLDTEE 699
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+ YEPSKRS NWLK+KKDY+ +GDSLDLV + A+HGRGKRT VYGAFLLA Y+S+ + +
Sbjct: 700 SGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAYHGRGKRTSVYGAFLLAAYNSSTQTY 759
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
++IC IGTGFSEA+LEE ++L I +P+P+Y ++ PDVWFEP
Sbjct: 760 ETICNIGTGFSEAVLEEFYNALSPLTIDRPKPFYSHSNVPKDQPDVWFEP 809
>gi|350636886|gb|EHA25244.1| hypothetical protein ASPNIDRAFT_186220 [Aspergillus niger ATCC
1015]
Length = 915
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 280/590 (47%), Positives = 377/590 (63%), Gaps = 47/590 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 244 WKAGDPVPYAALCTTFSLIEMTTKRLVILAHCSLFLRQVLRLTPQDLLPTVQLMINKLAA 303
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 304 DYAGIELGIGESLIMKAIGESTGRSLAVIKTDQHEIGDLGLVAAKSRSNQPTMFKPKPLT 363
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQY 345
+ V + IAK G SQ+KK + IK LL AA E +Y
Sbjct: 364 VRGVHEGLLGIAKVQGHGSQDKKISGIKKLLSAADAATAGKGSKGIDITKDKGGPSEAKY 423
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ----HSKPPPNIQSPLEEAAKIVKQVFSV 401
++R L+ KLR+GLAE+T+L AL QA V +E H P L E I+K V+S
Sbjct: 424 IVRFLEGKLRLGLAEKTVLVALAQAVVAHEAAMEGHKTPSAE---KLAEGEAILKTVYSE 480
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
LP YE I+PA+L G+ NL C PGIP+ PMLAKPTK ++E++++F+ EFTCEYKY
Sbjct: 481 LPAYEVIIPAILEHGLSNLPKVCKLQPGIPLKPMLAKPTKSITEVLDRFEGKEFTCEYKY 540
Query: 462 DGERAQIHYLEDGSVE------------------IYSRNAERNTGKFPDVVLAVSRLKKP 503
DGERAQIHY+ S+ I+SRN+E + K+PDV+ + K
Sbjct: 541 DGERAQIHYVAPDSIHQYPGATATLKKDAKGLSAIFSRNSEDLSKKYPDVLAKLDGWIKE 600
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLL 563
V+SFVLDCE VA+D E +K+LPFQ L TR RK+V D+KV VCI+AFD+L+ NG+P +
Sbjct: 601 GVQSFVLDCETVAWDTENKKVLPFQQLMTRKRKDVKAEDVKVKVCIFAFDLLFLNGEPTV 660
Query: 564 QEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RD 622
++ LR RRE L++SF+ G FQFA + LDEIQ LD +V ASCEGL++K +D +
Sbjct: 661 KKSLRERRELLHESFQVTEGEFQFAQYGNTNVLDEIQTLLDDSVKASCEGLMVKMLDTEE 720
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+ YEPSKRS NWLK+KKDY+ +GDSLDLV + A+HGRGKRT VYGAFLLA Y+S+ + +
Sbjct: 721 SGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAYHGRGKRTSVYGAFLLAAYNSSTQTY 780
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
++IC IGTGFSEA+LEE ++L I +P+P+Y ++ PDVWFEP
Sbjct: 781 ETICNIGTGFSEAVLEEFYNALSPLTIDRPKPFYSHSNVPKDQPDVWFEP 830
>gi|195028338|ref|XP_001987033.1| GH20192 [Drosophila grimshawi]
gi|193903033|gb|EDW01900.1| GH20192 [Drosophila grimshawi]
Length = 674
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 268/613 (43%), Positives = 396/613 (64%), Gaps = 17/613 (2%)
Query: 138 QPTPPSPKKRKV-NVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFL 196
+P P P K+K+ ++ S S + + ++ + + L + P A W P++ L
Sbjct: 3 EPMEPLPSKQKIISLTSDSNESEGTDIYNPSLEL------YHPINHAYWRAEGVTPYLAL 56
Query: 197 SLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDA 256
+ F +I GR+ + DI+ N +VM +PEDLVP VYL+ N++APA+EGLELG+ +
Sbjct: 57 ARTFQVIEETKGRLKMIDILSNFFCSVMMVSPEDLVPCVYLSINQLAPAYEGLELGVAET 116
Query: 257 SIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIA 316
+++KA+ +A GR +H+K Q Q +GDLG+VA+ SR SQ MM +P PL + VF + IA
Sbjct: 117 TLMKAICKATGRNLAHIKSQTQLIGDLGIVAEQSRVSQRMMFRPKPLNVRAVFAKLKEIA 176
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN-- 374
+G + K + + VA E ++ IR L KLRIG+AEQ+LL AL A V
Sbjct: 177 NISG----QSKITLVYDIFVACRLSEARFFIRSLIGKLRIGIAEQSLLTALAIALVKKLH 232
Query: 375 ----EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
++ K + + E I+K F P Y+ I+PA+L + L C PG+
Sbjct: 233 INDCKRIDKVAEIYKDEIAETTLILKTTFCQCPNYDIIIPAILKYDIEELQERCPMHPGM 292
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
P+ PMLA+PTKGV E++ +F M TCE+KYDGERAQIH E G + I+SRN+E NT K+
Sbjct: 293 PLRPMLAQPTKGVHEVLERFSGMHITCEWKYDGERAQIHLNEQGEISIFSRNSENNTPKY 352
Query: 491 PDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIY 550
PD++ + K V+S++LD EIVA+D E+++ILPFQ LSTR RKNV + DIKV VC+Y
Sbjct: 353 PDLIARSKPILKTEVKSYILDSEIVAWDIERKQILPFQILSTRKRKNVDIDDIKVQVCVY 412
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
FD+LY NG+ L+ + L RR+ L++ F+E G ++FAT L + D+DE+Q+FL+ ++ +
Sbjct: 413 IFDLLYINGKSLVTQPLSERRKILFEHFQEVEGEWKFATALNTNDMDEVQQFLEESIKGN 472
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
CEGL++KT+D +ATYE +KRS NWLKLKKDY+ ++GDSLDLV I + G+G+RTG+YG F
Sbjct: 473 CEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGIYGGF 532
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
LLACYD++NEE+Q+ICKIGTGF++ L + S + + + + Y+R+ ++ PD WFEP
Sbjct: 533 LLACYDTDNEEYQTICKIGTGFTDEDLRQHSEFFSTNKLSEAKSYFRYDSSLEPDDWFEP 592
Query: 731 TERPETSNSPASI 743
+ E + S+
Sbjct: 593 CQVWEVKCADLSL 605
>gi|195149365|ref|XP_002015628.1| GL11174 [Drosophila persimilis]
gi|194109475|gb|EDW31518.1| GL11174 [Drosophila persimilis]
Length = 744
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 276/629 (43%), Positives = 394/629 (62%), Gaps = 16/629 (2%)
Query: 124 SNQIDNP---IDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPK 180
+N+I +P I E + P S +RKV +++ K + K + + P
Sbjct: 54 ANRIIDPNPSIIEAMEIKEEPTSKVERKVTTIGLNSTSK--DNKEEVENYDPSNEAYHPL 111
Query: 181 MVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAAN 240
A W+ P++ L+ F +I GR+ + D + N +VM +P DL+P VYL+ N
Sbjct: 112 EHAYWKAKAVTPYLALARTFQVIEETKGRLKMIDTLSNFFSSVMLVSPNDLLPSVYLSIN 171
Query: 241 KIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
++APA+EGLELG+ + +++KA+ +A GR +H+K Q GDLG+VA+ SR SQ MM +P
Sbjct: 172 QLAPAYEGLELGVAETTLMKAICKATGRNLAHIKSQTHLTGDLGIVAEQSRVSQRMMFQP 231
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
PL I VF+ R IAK +G + K + + VA E ++ IR L KLRIG+AE
Sbjct: 232 APLNIRGVFNKLREIAKISG----QSKMTLVYDVFVACRSSEARFFIRSLIGKLRIGIAE 287
Query: 361 QTLLAALGQAAVYNEQH------SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
Q+LL AL A V + H SK + + E ++K +S P Y+ I+PA+L
Sbjct: 288 QSLLTALAIALV-KKNHINDCKVSKIVDVYKDEITETTLLLKTAYSQCPNYDIIIPAILK 346
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
+ L C PG+P+ PMLA+PTKGV E+ +F M TCE+KYDGERAQIH E G
Sbjct: 347 YDIKELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGSMHITCEWKYDGERAQIHCNERG 406
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
+ I+SRN+E NT K+PD++ K +V+S+++D EIVA+D E+++ILPFQ LSTR
Sbjct: 407 EISIFSRNSENNTAKYPDLIARSKGFLKGAVQSYIIDSEIVAWDVERKQILPFQVLSTRK 466
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI 594
RKNV + +IKV VC+Y FD+LY NG L+ L RR+ L + F+E G ++FAT L +
Sbjct: 467 RKNVDIEEIKVQVCVYIFDLLYINGTTLVTSPLSERRKLLLEHFQEVEGEWKFATALDTN 526
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPI 654
D+DE+Q+FL+ +V +CEGL++KT+D +ATYE +KRS NWLKLKKDY+ ++GDSLDLV I
Sbjct: 527 DIDEVQQFLEESVKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVI 586
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRP 714
+ G+G+RTG YG FLLACYD+ NEE+QSICKIGTGF++ L S L VIP +
Sbjct: 587 GGYKGKGRRTGTYGGFLLACYDTENEEYQSICKIGTGFTDEDLRIHSEFLGKHVIPSAKS 646
Query: 715 YYRFADTISPDVWFEPTERPETSNSPASI 743
Y+R+ ++ PD WFEP + E + S+
Sbjct: 647 YFRYDSSLEPDHWFEPAQVWEVKCADLSL 675
>gi|240282287|gb|EER45790.1| DNA ligase [Ajellomyces capsulatus H143]
Length = 899
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 302/705 (42%), Positives = 411/705 (58%), Gaps = 54/705 (7%)
Query: 70 KKKPSPQPNSSSSSSSP-KKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQID 128
K++ SP +S S+ P KRR KT + A N + N +
Sbjct: 119 KREKSPMEDSDESNVQPVTKRRKRAPSNRKTAGK------KPSASPNQNKRTRSPKNARE 172
Query: 129 NPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKG 188
P+ +KES + + + K KIA+ K V K DP W+ G
Sbjct: 173 KPVAEDKESSSAEQEDNISENDDDLAEEKPKIAQKKRETVQQALKGSRKDP--YPDWKAG 230
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
E VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A + G
Sbjct: 231 EPVPYAALCTTFSLIEMTTRRLIILSHCSLFLRQVLRLTPKDLLPTVQLMLNKLAADYAG 290
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT+ V
Sbjct: 291 IELGIGESFIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLTVRSV 350
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQYLIRL 349
+ IAK G SQEKK + IK LL +A E +++IR
Sbjct: 351 HEGLLAIAKTQGHGSQEKKISAIKKLLSSADATLAGKGSKGIDITQNKGGPSEAKFIIRF 410
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNE---QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYE 406
L+ KLR+GLAE+T+L AL A V +E Q K P + L + I+K V+S LP YE
Sbjct: 411 LEGKLRLGLAEKTVLVALAHAMVAHEVELQGKKAPSTEE--LGKGEAILKSVYSELPSYE 468
Query: 407 KIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
I+PA+L G++NL C PG+P+ PMLAKPTK ++E++++F+ FTCEYKYDGERA
Sbjct: 469 VIIPAMLEHGIFNLKEKCKLQPGVPLKPMLAKPTKSITEVLDRFEGKNFTCEYKYDGERA 528
Query: 467 QIHYLE------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSF 508
QIHY+ +G I+SRN+E + K+PD++ + K SF
Sbjct: 529 QIHYVAREEMHKYPSTASTLQKDGEGICAIFSRNSEDLSKKYPDILGKLENWVKQGTTSF 588
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
VLDCE VA+D +K+LPFQ L TR RK+V D+KV VC++AFD+L+ NG+P ++ LR
Sbjct: 589 VLDCETVAWDTVNKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTVKMTLR 648
Query: 569 VRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEP 627
RR L+D+F G F FA + DLDEIQ LD +V ASCEGL++K +D ++ YEP
Sbjct: 649 ERRARLHDAFTPIEGEFVFAQHGDTNDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEP 708
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
SKRS NWLK+KKDY+ IGDSLDLV + A++GRGKRT VYGAFLLA Y+++ + FQ++C
Sbjct: 709 SKRSRNWLKVKKDYLAGIGDSLDLVVLGAYYGRGKRTSVYGAFLLAAYNTSTQTFQTVCN 768
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
IGTGFSEA+LEE SL VI +P+P+Y + PDVWFEP
Sbjct: 769 IGTGFSEALLEELHKSLSPLVIDRPKPFYDHSSVPKDQPDVWFEP 813
>gi|440906381|gb|ELR56651.1| DNA ligase 1, partial [Bos grunniens mutus]
Length = 917
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 267/572 (46%), Positives = 381/572 (66%), Gaps = 16/572 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACWE G+RVP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 267 YHPIEDACWEAGQRVPYLAVARAFEKIEEVSARLRMVETLSNLLRSVVALSPADLLPVLY 326
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELGIG+ ++KA+A+A GR V+ + E GD+GLVA++SRS+Q +
Sbjct: 327 LSLNRLGPPQQGLELGIGEGILLKAVAQATGRQLESVRAEVAEKGDVGLVAESSRSTQRL 386
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
+ P LT VF FR IA+ AG S KK + IK L VA E +++ R L +LR+
Sbjct: 387 VLPPPALTAAGVFAKFRDIAQLAGSASTTKKIDVIKGLFVACRHSEARFIARALSGRLRL 446
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 447 GLAEQSVLAALAQAVSLTPPSQECPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 506
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
E+IVP LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 507 LEQIVPVLLEHGLERLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 566
Query: 465 RAQIHYLED-GSVEIYSRNAERNTGKFPDVVLA-VSRLKKPSVRSFVLDCEIVAYDREKQ 522
RAQ+ + G ++SR+ R F + LA V R+K PSV SF+LD E VA+DREK+
Sbjct: 567 RAQVRGFQGFGEPCVFSRDEHREDVGFTESSLAAVRRIKLPSVTSFILDTEAVAWDREKK 626
Query: 523 KILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPL--LQEQLRVRREHLYDSFEE 580
+I PFQ L+TR RK V ++I+V VC+YAFD++Y NG+ L ++E L RR+ L ++F E
Sbjct: 627 QIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLSLVREPLSRRRQLLRENFVE 686
Query: 581 EPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKD 640
G F FAT+L + D ++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKD
Sbjct: 687 TEGEFVFATSLDTKDSEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKD 746
Query: 641 YIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEER 700
Y+E +GD+LDLV I A+ G+GKR G YG FLLA YD +EEFQ+ICK+GTGFS+ LEE
Sbjct: 747 YLEGVGDTLDLVVIGAYLGKGKRAGRYGGFLLASYDEESEEFQAICKLGTGFSDEELEEH 806
Query: 701 SSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
L++ V+P PR Y R ++PD W +P++
Sbjct: 807 HQRLQALVLPTPRSYVRADGAVAPDHWLDPSD 838
>gi|198456070|ref|XP_001360228.2| GA18999 [Drosophila pseudoobscura pseudoobscura]
gi|198135509|gb|EAL24802.2| GA18999 [Drosophila pseudoobscura pseudoobscura]
Length = 744
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/573 (46%), Positives = 371/573 (64%), Gaps = 11/573 (1%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P A W+ P++ L+ F +I GR+ + D + N +VM +P DL+P VY
Sbjct: 108 YHPLEHAYWKAKAVTPYLALARTFQVIEETKGRLKMIDTLSNFFSSVMLVSPNDLLPSVY 167
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++APA+EGLELG+ + +++KA+ +A GR +H+K Q GDLG+VA+ SR SQ M
Sbjct: 168 LSINQLAPAYEGLELGVAETTLMKAICKATGRNLAHIKSQTHLTGDLGIVAEQSRVSQRM 227
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M +P PL I VF R IAK +G + K + + VA E ++ IR L KLRI
Sbjct: 228 MFQPAPLNIRGVFSKLREIAKISG----QSKMTLVYDVFVACRSSEARFFIRSLIGKLRI 283
Query: 357 GLAEQTLLAALGQAAVYNEQH------SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVP 410
G+AEQ+LL AL A V + H SK + + E ++K +S P Y+ I+P
Sbjct: 284 GIAEQSLLTALAIALV-KKNHINDCKVSKIVDVYKDEITETTLLLKTAYSQCPNYDIIIP 342
Query: 411 ALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY 470
A+L + L C PG+P+ PMLA+PTKGV E+ +F M TCE+KYDGERAQIH
Sbjct: 343 AILKYDIKELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGSMHITCEWKYDGERAQIHC 402
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
E G + I+SRN+E NT K+PD++ K +V+S+++D EIVA+D E+++ILPFQ L
Sbjct: 403 NERGEISIFSRNSENNTAKYPDLIARSKGFLKGAVQSYIIDSEIVAWDVERKQILPFQVL 462
Query: 531 STRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
STR RKNV + +IKV VC+Y FD+LY NG L+ L RR+ L + F+E G ++FAT
Sbjct: 463 STRKRKNVDIEEIKVQVCVYIFDLLYINGTTLVTSPLSERRKLLLEHFQEVEGEWKFATA 522
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLD 650
L + D+DE+Q+FL+ +V +CEGL++KT+D +ATYE +KRS NWLKLKKDY+ ++GDSLD
Sbjct: 523 LDTNDMDEVQQFLEESVKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLD 582
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP 710
LV I + G+G+RTG YG FLLACYD+ NEE+QSICKIGTGF++ L S L VIP
Sbjct: 583 LVVIGGYKGKGRRTGTYGGFLLACYDTENEEYQSICKIGTGFTDEDLRIHSEFLGKHVIP 642
Query: 711 KPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ Y+R+ ++ PD WFEP + E + S+
Sbjct: 643 SAKSYFRYDSSLEPDHWFEPAQVWEVKCADLSL 675
>gi|256074242|ref|XP_002573435.1| DNA ligase I [Schistosoma mansoni]
Length = 752
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 268/586 (45%), Positives = 368/586 (62%), Gaps = 16/586 (2%)
Query: 173 KAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV 232
KAG + P W +GE VP++ L+ F+ I +GRI IT+I+CN R+V + DL
Sbjct: 98 KAG-YHPIHDCNWREGESVPYLSLARTFECIEATSGRIKITEILCNFFRSVGLLSSFDLT 156
Query: 233 PVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRS 292
VYL N++ PA+EG+ELG+G+ ++KALA G H++ ++ GDLG VA+ RS
Sbjct: 157 SCVYLCLNRLGPAYEGMELGVGETILLKALAATTGVGIEHMRSSLKQHGDLGAVAETIRS 216
Query: 293 SQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQS 352
Q ++ P PLTI+ VF + IA +G +Q KK I++LLVA + E +Y+IR L
Sbjct: 217 RQKILSAPKPLTISSVFSKLKDIASMSGNSAQNKKMEIIRSLLVACRESETKYIIRSLSG 276
Query: 353 KLRIGLAEQTLLAALGQAA---------------VYNEQHSKPPPNIQSPLEEAAKIVKQ 397
KLRIGLAEQT+L ALGQA + N + + ++ A VK+
Sbjct: 277 KLRIGLAEQTVLTALGQAVAMTPFHFKVSDKSTRIINASNGMSSEQWKVTMDIAVANVKR 336
Query: 398 VFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC 457
+ V P Y +++ ALLT +L C+ TPGIP+ PMLA PT G+ EI+ +F++ +FTC
Sbjct: 337 AYCVCPDYSRLIKALLTKSHESLDQICTITPGIPLKPMLASPTHGIYEILKRFEECDFTC 396
Query: 458 EYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY 517
EYKYDGERAQIH L G+ +YSRN E NT K+PD+V + ++D E+VA+
Sbjct: 397 EYKYDGERAQIHILPSGASHVYSRNQEDNTTKYPDIVNNLMSXXXXKTLCCIIDSEVVAW 456
Query: 518 DREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDS 577
DR ILPFQ LSTR RK+V S +KV +CIY FDIL+ NG L+++ LR+RRE L +
Sbjct: 457 DRLAGHILPFQVLSTRKRKDVDESTLKVQICIYVFDILFINGISLIEQPLRIRREILREV 516
Query: 578 FEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKL 637
F G F AT+L S D DEI FLD A+ +CEGL+IKT+DR++TYE +KRS +WLKL
Sbjct: 517 FPRISGEFMMATSLDSSDTDEIATFLDEAIKGNCEGLMIKTLDRNSTYEIAKRSHSWLKL 576
Query: 638 KKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
KKDY+E +GD+LDLV I F+G GKR G YG +LLACYD + EE+Q+ICKIGTG + L
Sbjct: 577 KKDYLEGVGDTLDLVVIGGFYGTGKRAGRYGGYLLACYDPDTEEYQTICKIGTGMKDDEL 636
Query: 698 EERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
S ++ K +PYY++ ++ PD WFEP + E + SI
Sbjct: 637 ASFSEFFKNHATDKAKPYYQYTISLIPDQWFEPVQVWEVKAADLSI 682
>gi|67539798|ref|XP_663673.1| hypothetical protein AN6069.2 [Aspergillus nidulans FGSC A4]
gi|40738854|gb|EAA58044.1| hypothetical protein AN6069.2 [Aspergillus nidulans FGSC A4]
Length = 886
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 328/790 (41%), Positives = 456/790 (57%), Gaps = 91/790 (11%)
Query: 10 PLRLTPLS--GNVVKPTSFSRLSFSSHHLFQKPKPLSSSLNPRRKMSSSAP--------N 59
P + T LS GN K TS SR P SSLN K +S+ +
Sbjct: 33 PKKQTILSFGGNRSKSTSASR-----------PNREPSSLNGNTKNASAVTRGDDVNTGD 81
Query: 60 AFQVL--MSAAAKKKPSPQPNSSSSSSSP---------KKRRTLDTQTP------KTTNS 102
AF+V M A A + P + S S S K+RR +TP + S
Sbjct: 82 AFEVKPEMRAGADQNPLKRDKSEDVSDSDESEKVQPSNKRRRKSSGKTPAKPQIDSSPES 141
Query: 103 VVGEKIQEVAEEPSNDLVKPISNQIDNPIDSE-KESQPTPPSPKKRKVNVNSVSAKEKIA 161
G K Q +EP+ ++V S + + P D + E++ S + + + K++I
Sbjct: 142 TKGRKSQ--VKEPTPEIVVKASGE-ETPEDPDVSEAEEEGLSASEDETDKKPELKKKEIE 198
Query: 162 ELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLR 221
++++ I K DP W+ GE VP+ L F +I T R+ I LR
Sbjct: 199 KVQATI-----KGSGNDP--YPDWQPGEPVPYAALCTTFSLIEMTTKRLQILAHCSLFLR 251
Query: 222 TVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMG 281
V+ TP+D +P V L NK+A + G+ELGIG++ I+KA+ E+ GR+ + +K E+G
Sbjct: 252 QVLRLTPQDFLPTVQLMINKLAADYAGIELGIGESLIMKAIGESTGRSLAVIKADQHEIG 311
Query: 282 DLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC 341
DLGLVA SRS+Q M KP LT+ V + IAK G +Q+KK + IK LL AA
Sbjct: 312 DLGLVAAKSRSNQPTMFKPKALTVRGVHEGLLNIAKVQGHGAQDKKISGIKKLLSAADAA 371
Query: 342 -------------------EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ--HSKP 380
E +Y++R L+ KLR+GLAE+T+L AL QA V +E K
Sbjct: 372 TTGKGSKGIDITKNKGGPSEAKYIVRFLEGKLRLGLAEKTVLVALAQAVVSHEAALKGKK 431
Query: 381 PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPT 440
P+ + L E I+K V+S LP YE I+PALL G+ NL C PGIPI PMLAKPT
Sbjct: 432 APSAEE-LAEGEAILKTVYSELPAYEVIIPALLEHGLSNLREHCKLQPGIPIKPMLAKPT 490
Query: 441 KGVSEIVNKFQDMEFTCEYKYDGERAQIHYL-----------------EDGSVEIYSRNA 483
K ++E++++F+ +FTCEYKYDGERAQIHY+ G I+SRN+
Sbjct: 491 KSITEVLDRFEGKDFTCEYKYDGERAQIHYVAPDETKNYPGAQLTLKESAGLSAIFSRNS 550
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E + K+PDV+ +S KP V+SFVLDCE VA+D E +K+LPFQ L TR RK+V D+
Sbjct: 551 EDLSKKYPDVLAKLSTWIKPGVKSFVLDCETVAWDVEAKKVLPFQQLMTRKRKDVKAEDV 610
Query: 544 KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFL 603
KV VC++AFD+L+ NG+P +++ LR RR+ L+ SF+ G FQFA + DL++IQ L
Sbjct: 611 KVKVCVFAFDLLFLNGEPTVKKPLRQRRDLLHSSFQPIEGEFQFAQYGNTNDLEQIQTLL 670
Query: 604 DAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
D +V ASCEGL++K +D ++ YEPSKRS NWLK+KKDY+ +GDSLDL+ + A++GRGK
Sbjct: 671 DDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLLVLGAYYGRGK 730
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT- 721
RT VYGAFLLA Y+SN++ +++IC IGTGFSEAML+E ++L VI +P+P+Y +
Sbjct: 731 RTSVYGAFLLAAYNSNSQTYETICNIGTGFSEAMLDELHTTLSPLVIDRPKPFYSHSTVP 790
Query: 722 -ISPDVWFEP 730
PDVW EP
Sbjct: 791 KDQPDVWLEP 800
>gi|259479746|tpe|CBF70249.1| TPA: DNA ligase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 932
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 324/782 (41%), Positives = 451/782 (57%), Gaps = 89/782 (11%)
Query: 16 LSGNVVKPTSFSRLSFSSHHLFQKPKPLSSSLNPRRKMSSSAP--------NAFQVL--M 65
GN K TS SR P SSLN K +S+ +AF+V M
Sbjct: 87 FGGNRSKSTSASR-----------PNREPSSLNGNTKNASAVTRGDDVNTGDAFEVKPEM 135
Query: 66 SAAAKKKPSPQPNSSSSSSSP---------KKRRTLDTQTP------KTTNSVVGEKIQE 110
A A + P + S S S K+RR +TP + S G K Q
Sbjct: 136 RAGADQNPLKRDKSEDVSDSDESEKVQPSNKRRRKSSGKTPAKPQIDSSPESTKGRKSQ- 194
Query: 111 VAEEPSNDLVKPISNQIDNPIDSE-KESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVL 169
+EP+ ++V S + + P D + E++ S + + + K++I ++++ I
Sbjct: 195 -VKEPTPEIVVKASGE-ETPEDPDVSEAEEEGLSASEDETDKKPELKKKEIEKVQATI-- 250
Query: 170 LKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE 229
K DP W+ GE VP+ L F +I T R+ I LR V+ TP+
Sbjct: 251 ---KGSGNDP--YPDWQPGEPVPYAALCTTFSLIEMTTKRLQILAHCSLFLRQVLRLTPQ 305
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA 289
D +P V L NK+A + G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA
Sbjct: 306 DFLPTVQLMINKLAADYAGIELGIGESLIMKAIGESTGRSLAVIKADQHEIGDLGLVAAK 365
Query: 290 SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------- 341
SRS+Q M KP LT+ V + IAK G +Q+KK + IK LL AA
Sbjct: 366 SRSNQPTMFKPKALTVRGVHEGLLNIAKVQGHGAQDKKISGIKKLLSAADAATTGKGSKG 425
Query: 342 -----------EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ--HSKPPPNIQSPL 388
E +Y++R L+ KLR+GLAE+T+L AL QA V +E K P+ + L
Sbjct: 426 IDITKNKGGPSEAKYIVRFLEGKLRLGLAEKTVLVALAQAVVSHEAALKGKKAPSAEE-L 484
Query: 389 EEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVN 448
E I+K V+S LP YE I+PALL G+ NL C PGIPI PMLAKPTK ++E+++
Sbjct: 485 AEGEAILKTVYSELPAYEVIIPALLEHGLSNLREHCKLQPGIPIKPMLAKPTKSITEVLD 544
Query: 449 KFQDMEFTCEYKYDGERAQIHYL-----------------EDGSVEIYSRNAERNTGKFP 491
+F+ +FTCEYKYDGERAQIHY+ G I+SRN+E + K+P
Sbjct: 545 RFEGKDFTCEYKYDGERAQIHYVAPDETKNYPGAQLTLKESAGLSAIFSRNSEDLSKKYP 604
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYA 551
DV+ +S KP V+SFVLDCE VA+D E +K+LPFQ L TR RK+V D+KV VC++A
Sbjct: 605 DVLAKLSTWIKPGVKSFVLDCETVAWDVEAKKVLPFQQLMTRKRKDVKAEDVKVKVCVFA 664
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASC 611
FD+L+ NG+P +++ LR RR+ L+ SF+ G FQFA + DL++IQ LD +V ASC
Sbjct: 665 FDLLFLNGEPTVKKPLRQRRDLLHSSFQPIEGEFQFAQYGNTNDLEQIQTLLDDSVKASC 724
Query: 612 EGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
EGL++K +D ++ YEPSKRS NWLK+KKDY+ +GDSLDL+ + A++GRGKRT VYGAF
Sbjct: 725 EGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLLVLGAYYGRGKRTSVYGAF 784
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWF 728
LLA Y+SN++ +++IC IGTGFSEAML+E ++L VI +P+P+Y + PDVW
Sbjct: 785 LLAAYNSNSQTYETICNIGTGFSEAMLDELHTTLSPLVIDRPKPFYSHSTVPKDQPDVWL 844
Query: 729 EP 730
EP
Sbjct: 845 EP 846
>gi|391328687|ref|XP_003738816.1| PREDICTED: DNA ligase 1-like [Metaseiulus occidentalis]
Length = 854
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 295/713 (41%), Positives = 425/713 (59%), Gaps = 33/713 (4%)
Query: 50 RRKMSSSAP-NAFQVLMSAAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKI 108
+RK+SS +P +A + + P + S + + +T T++PK + E
Sbjct: 92 KRKLSSGSPKDAPPTKRQSKVGETPEVEKTSKAKAGRKSSPKTTKTKSPKNKKN---EMC 148
Query: 109 QEVAEEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIV 168
+E AE +N +P+S N EK++Q PK S KE+ K N
Sbjct: 149 EEGAERKANVKEQPLSPMAVNTSVDEKDTQEGERIPKD--------SPKEEPQTPKLNFG 200
Query: 169 LLKK---KAGE--------FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVC 217
+ KAGE +DP A W+K E++P++ + I N + R+ + +I+C
Sbjct: 201 KAESTTSKAGEEYRPDKSNYDPVNDAVWKKDEKIPYLAFCRTLECIDNNSSRLKMIEILC 260
Query: 218 NMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQY 277
N R+ + +P DL+ VYL NKIAP +EG ELGIGD+ ++KA+AE GRT +KK+
Sbjct: 261 NFFRSCLAVSPNDLIYAVYLCLNKIAPDYEGKELGIGDSLLMKAVAEVTGRTMDAIKKEV 320
Query: 278 QEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVA 337
GDLG VA+AS+S+Q M+ P L + VF+ + IA+ +G Q KK + IK++ VA
Sbjct: 321 HVKGDLGSVAEASKSNQKMIFAPPKLLLCNVFNKLKQIAQLSGHSVQTKKVDMIKSMFVA 380
Query: 338 ATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKP-------PPNIQSPLEE 390
E ++LIR L KLRIGLAE +LL AL A H +P + + LEE
Sbjct: 381 CRGSESKFLIRSLTGKLRIGLAESSLLTALAHAITL---HDRPKLLKTLGSDSTKKVLEE 437
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF 450
A +K V+ P Y+KI+ LL DG L C TPG+P+ PMLA PTKGV++++ +F
Sbjct: 438 ATLTLKTVYCECPNYDKIIEVLLRDGFDALPEKCKITPGVPMKPMLAHPTKGVADVLKRF 497
Query: 451 QDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
+M FTCE+KYDGERAQIH E + I+SRN E NT K+PD++ +S+ K V F++
Sbjct: 498 DNMSFTCEFKYDGERAQIHMTEGKKISIFSRNQENNTTKYPDIIERISKNVKDDVTDFIM 557
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
D E VAYDREK++ILPFQTL R +K+V +I + V ++AFD+LY NG+ L++E R R
Sbjct: 558 DSEAVAYDREKKQILPFQTLMHRKKKDVDQKEITIQVYVFAFDLLYLNGRSLVREPFRER 617
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKR 630
R L + F E F A ++++IQ+FL+ ++ +CEGL++KT+D DATYE +KR
Sbjct: 618 RRLLREHFNEVEAEFGLAQNADLDNVEDIQEFLEQSIKGNCEGLMVKTLDNDATYEIAKR 677
Query: 631 SLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGT 690
S NWLKLKKDY+E +GD++D+V I + G+GKRTG YG FLLACYD +EEFQS+CKIGT
Sbjct: 678 SHNWLKLKKDYLEGVGDTIDVVVIGGWKGKGKRTGTYGGFLLACYDPESEEFQSLCKIGT 737
Query: 691 GFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
GF E LE+ ++ + V+ K +PYY ++ PD WF+ + E + SI
Sbjct: 738 GFKEEELEQHTNFFKDHVLDKVKPYYNADASLQPDDWFDAVQVWEIKCADLSI 790
>gi|195382489|ref|XP_002049962.1| GJ20456 [Drosophila virilis]
gi|194144759|gb|EDW61155.1| GJ20456 [Drosophila virilis]
Length = 667
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/573 (46%), Positives = 375/573 (65%), Gaps = 11/573 (1%)
Query: 177 FDPKMVACWEKGERV-PFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
+ P A W K ERV P++ L+ F +I +GR+ + DI+ N +VM +PEDLVP V
Sbjct: 31 YHPLKHAYW-KAERVTPYLALARTFQVIEETSGRLKMIDILSNFFCSVMLVSPEDLVPCV 89
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL+ N++APA+EGLELG+ + +++KA+ +A GR +H+K Q GDLG+VA+ SR SQ
Sbjct: 90 YLSINQLAPAYEGLELGVAETTLMKAICKATGRNLAHIKSQTHLTGDLGIVAEQSRVSQR 149
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
MM +P PL + VF + IAK +G + K + + VA E ++ IR L KLR
Sbjct: 150 MMFRPKPLNVRGVFTKLKEIAKISG----QAKMTLVYDVFVACRLSEARFFIRSLIGKLR 205
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPN-----IQSPLEEAAKIVKQVFSVLPVYEKIVP 410
IG+AEQ+LL AL A V + N + + E I+K F P Y+ I+P
Sbjct: 206 IGIAEQSLLTALAIALVKRNHINDCKTNKVCDVYKDEIAETTLILKTTFCQCPNYDIIIP 265
Query: 411 ALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY 470
A+L + L C PG+P+ PMLA+PTKGV E++ +F M TCE+KYDGERAQIH
Sbjct: 266 AILKYDIKELQERCPMHPGMPLRPMLAQPTKGVLEVLERFSGMHITCEWKYDGERAQIHL 325
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
E G + I+SRN+E NT K+PD++ K V+S+++D EIVA+D E+++ILPFQ L
Sbjct: 326 NELGEISIFSRNSENNTPKYPDLIARSKSFLKTDVQSYIIDSEIVAWDIERKQILPFQIL 385
Query: 531 STRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
STR RKNV + DIKV VC+Y FD+L+ NG L+ + L +RR+ L++ F+E G ++FAT
Sbjct: 386 STRKRKNVDIEDIKVQVCVYIFDLLFINGVSLVTKPLSLRRKMLFEHFQEVEGQWKFATA 445
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLD 650
L + D+DE+Q+FL+ ++ +CEGL++KT++ +ATYE +KRS NWLKLKKDY+ ++GDSLD
Sbjct: 446 LDTNDMDEVQQFLEESIKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLSNVGDSLD 505
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP 710
LV I + G+G+RTG YG FLLACYD+ NEE+QSICKIGTGF++ L S V
Sbjct: 506 LVVIGGYKGKGRRTGTYGGFLLACYDTENEEYQSICKIGTGFTDDDLRLHSEFFNKHVTG 565
Query: 711 KPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ Y+R+ ++ PDVWFEP + E + S+
Sbjct: 566 SAKSYFRYDPSLEPDVWFEPVQVWEVKCADLSL 598
>gi|242776785|ref|XP_002478901.1| DNA ligase Cdc9, putative [Talaromyces stipitatus ATCC 10500]
gi|218722520|gb|EED21938.1| DNA ligase Cdc9, putative [Talaromyces stipitatus ATCC 10500]
Length = 860
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 308/711 (43%), Positives = 421/711 (59%), Gaps = 88/711 (12%)
Query: 79 SSSSSSSPKKRRTLDTQTP---KTTNSVVGEKIQ--EVAEEPSNDLVKPISNQIDNPI-- 131
S S S KRR ++++P KT V+ E+ ++A++ S + V P+ ID P
Sbjct: 94 SDSDIQSANKRRKKNSKSPRPKKTAKEVLAERPSSPKIAKKASGE-VTPVEEDIDEPAEE 152
Query: 132 -------DSEKESQPTPPSPKKRKVNVNSVSAKEKI-AELKSNIVLLKKKAGEFDPKMVA 183
D EK P KK+++ EKI A LKS DP
Sbjct: 153 PSASEEEDDEK------PEIKKKQI--------EKIQATLKST---------GNDP--YP 187
Query: 184 CWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIA 243
W GE VP+ L F +I T R++I LR V+ TPEDL+P V L NK+A
Sbjct: 188 DWRAGEPVPYAALCTTFSLIEMTTKRLIILAHASLFLRQVLRLTPEDLLPTVQLMINKLA 247
Query: 244 PAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPL 303
+ G+ELGIG++ I+K++ E GR+ S +K E+GDLGLVA SR +Q M KP PL
Sbjct: 248 ADYAGIELGIGESLIMKSIGETTGRSLSVIKADQHEIGDLGLVAAKSRLNQPTMFKPKPL 307
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQ 344
T+ V + IAK G SQ+KK + IK LL AA E +
Sbjct: 308 TVRGVHEGLLAIAKVQGHGSQDKKISGIKKLLSAADSAIAGKGAKGVDIKQNKGGPSEAK 367
Query: 345 YLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP----LEEAAKIVKQVFS 400
+LIR L+ KLR+GLAE+T+L AL QA V +E K +SP L + ++KQV+S
Sbjct: 368 FLIRFLEGKLRLGLAEKTVLVALAQAVVTHEAALK---GEKSPSAERLAQGESVLKQVYS 424
Query: 401 VLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYK 460
LP YE I+PA+L +G++NL C PG+P+ PMLAKPTK ++E++++F+ EFTCEYK
Sbjct: 425 ELPAYEVIIPAMLKEGIFNLPKVCKLQPGVPLKPMLAKPTKSITEVLDRFEGKEFTCEYK 484
Query: 461 YDGERAQIHYLEDGSVE------------------IYSRNAERNTGKFPDVVLAVSRLKK 502
YDGERAQIHY+ S+ I+SRN+E + K+PD++ + K
Sbjct: 485 YDGERAQIHYVSPDSIHQYPNATATLQKDAKGLSSIFSRNSEDLSKKYPDILAKLDTWIK 544
Query: 503 PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPL 562
P V SFVLDCE VA+D +K+LPFQ L TR RK+V D+KV VC++AFD+L+ NG+P
Sbjct: 545 PGVTSFVLDCETVAWDMANKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPT 604
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-R 621
+++ LR RR+ L++SF G F FA + +LDEIQ L+ +V +SCEGL++K +D
Sbjct: 605 VKKSLRERRQLLHESFHPTEGEFAFAEHSNTNELDEIQSLLEESVKSSCEGLMVKMLDTE 664
Query: 622 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEE 681
++ YEPSKRS NWLK+KKDY+ +GDSLDLV + A+ GRGKRT VYGAFLLA Y+S+ +
Sbjct: 665 ESGYEPSKRSRNWLKVKKDYLSGLGDSLDLVVLGAYFGRGKRTSVYGAFLLAAYNSSKQT 724
Query: 682 FQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
F++IC IGTGFSEA+LEE L I +P+P+Y + PDVWFEP
Sbjct: 725 FETICNIGTGFSEALLEELHKELSPLAIDRPKPFYEHSTVPKEQPDVWFEP 775
>gi|350645177|emb|CCD60119.1| DNA ligase I, putative [Schistosoma mansoni]
Length = 749
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 269/586 (45%), Positives = 370/586 (63%), Gaps = 19/586 (3%)
Query: 173 KAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV 232
KAG + P W +GE VP++ L+ F+ I +GRI IT+I+CN R+V + DL
Sbjct: 98 KAG-YHPIHDCNWREGESVPYLSLARTFECIEATSGRIKITEILCNFFRSVGLLSSFDLT 156
Query: 233 PVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRS 292
VYL N++ PA+EG+ELG+G+ ++KALA G H++ ++ GDLG VA+ RS
Sbjct: 157 SCVYLCLNRLGPAYEGMELGVGETILLKALAATTGVGIEHMRSSLKQHGDLGAVAETIRS 216
Query: 293 SQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQS 352
Q ++ P PLTI+ VF + IA +G +Q KK I++LLVA + E +Y+IR L
Sbjct: 217 RQKILSAPKPLTISSVFSKLKDIASMSGNSAQNKKMEIIRSLLVACRESETKYIIRSLSG 276
Query: 353 KLRIGLAEQTLLAALGQAA---------------VYNEQHSKPPPNIQSPLEEAAKIVKQ 397
KLRIGLAEQT+L ALGQA + N + + ++ A VK+
Sbjct: 277 KLRIGLAEQTVLTALGQAVAMTPFHFKVSDKSTRIINASNGMSSEQWKVTMDIAVANVKR 336
Query: 398 VFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC 457
+ V P Y +++ ALLT +L C+ TPGIP+ PMLA PT G+ EI+ +F++ +FTC
Sbjct: 337 AYCVCPDYSRLIKALLTKSHESLDQICTITPGIPLKPMLASPTHGIYEILKRFEECDFTC 396
Query: 458 EYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY 517
EYKYDGERAQIH L G+ +YSRN E NT K+PD+V + L + ++D E+VA+
Sbjct: 397 EYKYDGERAQIHILPSGASHVYSRNQEDNTTKYPDIV---NNLMSRVLPDCIIDSEVVAW 453
Query: 518 DREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDS 577
DR ILPFQ LSTR RK+V S +KV +CIY FDIL+ NG L+++ LR+RRE L +
Sbjct: 454 DRLAGHILPFQVLSTRKRKDVDESTLKVQICIYVFDILFINGISLIEQPLRIRREILREV 513
Query: 578 FEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKL 637
F G F AT+L S D DEI FLD A+ +CEGL+IKT+DR++TYE +KRS +WLKL
Sbjct: 514 FPRISGEFMMATSLDSSDTDEIATFLDEAIKGNCEGLMIKTLDRNSTYEIAKRSHSWLKL 573
Query: 638 KKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
KKDY+E +GD+LDLV I F+G GKR G YG +LLACYD + EE+Q+ICKIGTG + L
Sbjct: 574 KKDYLEGVGDTLDLVVIGGFYGTGKRAGRYGGYLLACYDPDTEEYQTICKIGTGMKDDEL 633
Query: 698 EERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
S ++ K +PYY++ ++ PD WFEP + E + SI
Sbjct: 634 ASFSEFFKNHATDKAKPYYQYTISLIPDQWFEPVQVWEVKAADLSI 679
>gi|431920819|gb|ELK18592.1| DNA ligase 1 [Pteropus alecto]
Length = 926
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/567 (45%), Positives = 372/567 (65%), Gaps = 28/567 (4%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW++G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+P++Y
Sbjct: 296 YHPVEDACWKQGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPSDLLPILY 355
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELGIGD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 356 LSLNHLGPPQQGLELGIGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 415
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P LT + VF FR IA+ G S KK IK L VA E +++ R L +LR+
Sbjct: 416 MLPPPTLTASGVFAKFRDIARLTGSASTAKKIEIIKGLFVACRHSEARFIARALSGRLRL 475
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA PP + ++ LEE I+KQ F +P
Sbjct: 476 GLAEQSVLAALAQAVSLTPPGQGFPPAVVDAGKGRTAEARKTWLEEQGMILKQTFCEVPD 535
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
+++VP LL G+ L C +PG+P+ PMLA PT+GV E++ +F++ FTCEYKYDG+
Sbjct: 536 LDRVVPVLLEHGLERLPEHCRLSPGVPLKPMLAHPTRGVGEVLKRFEEAAFTCEYKYDGQ 595
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQ E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 596 RAQ----------------EDNTGKYPDIISRIPKIKLPSVTSFILDAEAVAWDREKKQI 639
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V ++I+V VC+YAFD++Y NG+ L++ L RR+ L ++F E G
Sbjct: 640 QPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVRGPLSRRRQLLRENFMETEGE 699
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D D+I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 700 FVFATSLDTKDTDQIAEFLEQSVRDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 759
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE L
Sbjct: 760 VGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEDSEELQAICKLGTGFSDDALEEHHHRL 819
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PR Y R ++PD W EP+
Sbjct: 820 QALVLPSPRSYVRADGAVAPDHWLEPS 846
>gi|83775118|dbj|BAE65241.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 882
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 282/590 (47%), Positives = 375/590 (63%), Gaps = 47/590 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 211 WKPGTPVPYAALCTTFSLIEMTTKRLVILAHCSLFLRQVLRLTPQDLLPTVQLMINKLAA 270
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 271 DYAGVELGIGESLIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLT 330
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-------------------TDCEPQY 345
+ V + IAK G SQ+KK + IK LL AA E +Y
Sbjct: 331 VRGVHEGLLGIAKVQGHGSQDKKISGIKKLLSAADPETAGKGSKGVDITKNKGGPSEAKY 390
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSV 401
++R L+ KLR+GLAE+T+L AL QA V +E K P P L E I+K V+S
Sbjct: 391 IVRFLEGKLRLGLAEKTVLVALAQAVVTHEAALKGEKAPSPE---KLAEGEAILKTVYSE 447
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
LP YE I+PA+L +G+ L C PGIPI PMLAKPTK ++E++++F+ EFTCEYKY
Sbjct: 448 LPAYEIIIPAMLKNGLSKLHEACKLQPGIPIKPMLAKPTKSITEVLDRFEGKEFTCEYKY 507
Query: 462 DGERAQIHYL----------------EDGS--VEIYSRNAERNTGKFPDVVLAVSRLKKP 503
DGERAQIHY+ +DG I+SRN+E + K+PDV+ + K
Sbjct: 508 DGERAQIHYVAPDATHNYPEAQHTLQKDGKGLAAIFSRNSEDLSKKYPDVLAKLDSWIKD 567
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLL 563
V+SFVLDCE VA+D +K+LPFQ L TR RK+V D+KV VC++AFD+L+ NG+P +
Sbjct: 568 GVKSFVLDCETVAWDTVNKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTV 627
Query: 564 QEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDA 623
++ LR RRE L++SF+ G FQFA + LDEIQ+ LD +V ASCEGL++K +D D
Sbjct: 628 KKSLRERRELLHESFQVTEGEFQFAQFGNTNVLDEIQELLDDSVKASCEGLMVKMLDTDE 687
Query: 624 T-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+ YEPSKRS NWLK+KKDY+ +GDSLDLV + A++GRGKRT VYGAFLLA Y++N + +
Sbjct: 688 SGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAYYGRGKRTSVYGAFLLAAYNANTQTY 747
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
+SIC IGTGFSEA LEE L VI +P+P+Y + PDVWFEP
Sbjct: 748 ESICNIGTGFSEANLEELHKELSPLVIDRPKPFYTHSTVPKDQPDVWFEP 797
>gi|238493649|ref|XP_002378061.1| DNA ligase Cdc9, putative [Aspergillus flavus NRRL3357]
gi|220696555|gb|EED52897.1| DNA ligase Cdc9, putative [Aspergillus flavus NRRL3357]
Length = 953
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 282/590 (47%), Positives = 375/590 (63%), Gaps = 47/590 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 282 WKPGTPVPYAALCTTFSLIEMTTKRLVILAHCSLFLRQVLRLTPQDLLPTVQLMINKLAA 341
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 342 DYAGVELGIGESLIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLT 401
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-------------------TDCEPQY 345
+ V + IAK G SQ+KK + IK LL AA E +Y
Sbjct: 402 VRGVHEGLLGIAKVQGHGSQDKKISGIKKLLSAADPETAGKGSKGVDITKNKGGPSEAKY 461
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSV 401
++R L+ KLR+GLAE+T+L AL QA V +E K P P L E I+K V+S
Sbjct: 462 IVRFLEGKLRLGLAEKTVLVALAQAVVTHEAALKGEKAPSPE---KLAEGEAILKTVYSE 518
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
LP YE I+PA+L +G+ L C PGIPI PMLAKPTK ++E++++F+ EFTCEYKY
Sbjct: 519 LPAYEIIIPAMLKNGLSKLHEACKLQPGIPIKPMLAKPTKSITEVLDRFEGKEFTCEYKY 578
Query: 462 DGERAQIHYL----------------EDGS--VEIYSRNAERNTGKFPDVVLAVSRLKKP 503
DGERAQIHY+ +DG I+SRN+E + K+PDV+ + K
Sbjct: 579 DGERAQIHYVAPDATHNYPEAQHTLQKDGKGLAAIFSRNSEDLSKKYPDVLAKLDSWIKD 638
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLL 563
V+SFVLDCE VA+D +K+LPFQ L TR RK+V D+KV VC++AFD+L+ NG+P +
Sbjct: 639 GVKSFVLDCETVAWDTVNKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTV 698
Query: 564 QEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDA 623
++ LR RRE L++SF+ G FQFA + LDEIQ+ LD +V ASCEGL++K +D D
Sbjct: 699 KKSLRERRELLHESFQVTEGEFQFAQFGNTNVLDEIQELLDDSVKASCEGLMVKMLDTDE 758
Query: 624 T-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+ YEPSKRS NWLK+KKDY+ +GDSLDLV + A++GRGKRT VYGAFLLA Y++N + +
Sbjct: 759 SGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAYYGRGKRTSVYGAFLLAAYNANTQTY 818
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
+SIC IGTGFSEA LEE L VI +P+P+Y + PDVWFEP
Sbjct: 819 ESICNIGTGFSEANLEELHKELSPLVIDRPKPFYTHSTVPKDQPDVWFEP 868
>gi|317157291|ref|XP_001826374.2| DNA ligase Cdc9 [Aspergillus oryzae RIB40]
Length = 892
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 282/590 (47%), Positives = 375/590 (63%), Gaps = 47/590 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 221 WKPGTPVPYAALCTTFSLIEMTTKRLVILAHCSLFLRQVLRLTPQDLLPTVQLMINKLAA 280
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 281 DYAGVELGIGESLIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLT 340
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-------------------TDCEPQY 345
+ V + IAK G SQ+KK + IK LL AA E +Y
Sbjct: 341 VRGVHEGLLGIAKVQGHGSQDKKISGIKKLLSAADPETAGKGSKGVDITKNKGGPSEAKY 400
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSV 401
++R L+ KLR+GLAE+T+L AL QA V +E K P P L E I+K V+S
Sbjct: 401 IVRFLEGKLRLGLAEKTVLVALAQAVVTHEAALKGEKAPSPE---KLAEGEAILKTVYSE 457
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
LP YE I+PA+L +G+ L C PGIPI PMLAKPTK ++E++++F+ EFTCEYKY
Sbjct: 458 LPAYEIIIPAMLKNGLSKLHEACKLQPGIPIKPMLAKPTKSITEVLDRFEGKEFTCEYKY 517
Query: 462 DGERAQIHYL----------------EDGS--VEIYSRNAERNTGKFPDVVLAVSRLKKP 503
DGERAQIHY+ +DG I+SRN+E + K+PDV+ + K
Sbjct: 518 DGERAQIHYVAPDATHNYPEAQHTLQKDGKGLAAIFSRNSEDLSKKYPDVLAKLDSWIKD 577
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLL 563
V+SFVLDCE VA+D +K+LPFQ L TR RK+V D+KV VC++AFD+L+ NG+P +
Sbjct: 578 GVKSFVLDCETVAWDTVNKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTV 637
Query: 564 QEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDA 623
++ LR RRE L++SF+ G FQFA + LDEIQ+ LD +V ASCEGL++K +D D
Sbjct: 638 KKSLRERRELLHESFQVTEGEFQFAQFGNTNVLDEIQELLDDSVKASCEGLMVKMLDTDE 697
Query: 624 T-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+ YEPSKRS NWLK+KKDY+ +GDSLDLV + A++GRGKRT VYGAFLLA Y++N + +
Sbjct: 698 SGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAYYGRGKRTSVYGAFLLAAYNANTQTY 757
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
+SIC IGTGFSEA LEE L VI +P+P+Y + PDVWFEP
Sbjct: 758 ESICNIGTGFSEANLEELHKELSPLVIDRPKPFYTHSTVPKDQPDVWFEP 807
>gi|322709388|gb|EFZ00964.1| DNA ligase [Metarhizium anisopliae ARSEF 23]
Length = 886
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 271/583 (46%), Positives = 370/583 (63%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G VP+ L F +I T R++I LR VM TP+DL+P V L NK+AP
Sbjct: 222 WQPGSPVPYAALCQTFSLIEMTTKRLIIMGHCSLFLRQVMRLTPDDLLPTVLLMINKLAP 281
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ +K +E+GDLGLVA SRS+Q M KP PLT
Sbjct: 282 DYAGIELGIGESLIMKAIGETTGRSLQIIKADQKEIGDLGLVAVKSRSTQPTMFKPKPLT 341
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
+ V IA G +Q +K + IK LL AA E +++IR
Sbjct: 342 VRGVHQGLMNIATVTGNGAQGRKVDGIKKLLSAADAYSTVKADITKDKGGPSEAKFIIRF 401
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
L+ KLR+GLAE+T+L +L QA V +E K + +E I+K V+S LP Y+ I+
Sbjct: 402 LEGKLRLGLAERTVLVSLAQAIVCHEAEQKGKVPSTTDMENGESILKTVYSELPSYDAII 461
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PA+L+ G+ NL C PG+P+ PMLAKPTK ++E++++F+ +FTCEYKYDGERAQIH
Sbjct: 462 PAVLSHGIMNLRECCKLRPGVPLKPMLAKPTKAITEVLDRFEGQKFTCEYKYDGERAQIH 521
Query: 470 YLE-------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
Y+ DG I+SRN+E + K+PD++ + K +SFVL
Sbjct: 522 YVARDSDQELSQETSGAAKQAADGVASIFSRNSEDLSKKYPDILAKLHTWVKNDTKSFVL 581
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D ++K+LPFQ L TR +K+V L D+KV VC++AFD+LY NG P++++ LR R
Sbjct: 582 DCETVAWDVSEKKVLPFQQLMTRKKKDVKLEDVKVKVCVFAFDLLYLNGLPVVEKSLRER 641
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSK 629
RE L SF G F FAT + +LDEIQ FLD +V ASCEGL++K +D ++ YEPSK
Sbjct: 642 RELLQQSFAPVEGEFAFATYMDGQELDEIQLFLDESVKASCEGLMVKMLDGTESGYEPSK 701
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ +GDSLDLV + A++GRGKRT VYGAFLLACY+ N+ ++++C IG
Sbjct: 702 RSRNWLKVKKDYLAGVGDSLDLVVLGAYYGRGKRTSVYGAFLLACYNPANDTYETVCNIG 761
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
TGFSE +LEE + L VI +P+P+Y PDVWFEP
Sbjct: 762 TGFSEQVLEELHAQLSEIVIDRPKPFYSHSAGGQHQPDVWFEP 804
>gi|391869415|gb|EIT78613.1| ATP-dependent DNA ligase I [Aspergillus oryzae 3.042]
Length = 953
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 282/590 (47%), Positives = 375/590 (63%), Gaps = 47/590 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 282 WKPGTPVPYAALCTTFSLIEMTTKRLVILAHCSLFLRQVLRLTPQDLLPTVQLMINKLAA 341
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 342 DYAGVELGIGESLIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLT 401
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-------------------TDCEPQY 345
+ V + IAK G SQ+KK + IK LL AA E +Y
Sbjct: 402 VRGVHEGLLGIAKVQGHGSQDKKISGIKKLLSAADPETAGKGSKGVDITKNKGGPSEAKY 461
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSV 401
++R L+ KLR+GLAE+T+L AL QA V +E K P P L E I+K V+S
Sbjct: 462 IVRFLEGKLRLGLAEKTVLVALAQAVVTHEAALKGEKAPSPE---KLAEGEAILKTVYSE 518
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
LP YE I+PA+L +G+ L C PGIPI PMLAKPTK ++E++++F+ EFTCEYKY
Sbjct: 519 LPAYEIIIPAMLENGLSKLHEACKLQPGIPIKPMLAKPTKSITEVLDRFEGKEFTCEYKY 578
Query: 462 DGERAQIHYL----------------EDGS--VEIYSRNAERNTGKFPDVVLAVSRLKKP 503
DGERAQIHY+ +DG I+SRN+E + K+PDV+ + K
Sbjct: 579 DGERAQIHYVAPDATHNYLEAQHTLQKDGKGLAAIFSRNSEDLSKKYPDVLAKLDSWIKD 638
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLL 563
V+SFVLDCE VA+D +K+LPFQ L TR RK+V D+KV VC++AFD+L+ NG+P +
Sbjct: 639 GVKSFVLDCETVAWDTVNKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTV 698
Query: 564 QEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDA 623
++ LR RRE L++SF+ G FQFA + LDEIQ+ LD +V ASCEGL++K +D D
Sbjct: 699 KKSLRERRELLHESFQVTEGEFQFAQFGNTNVLDEIQELLDDSVKASCEGLMVKMLDTDE 758
Query: 624 T-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+ YEPSKRS NWLK+KKDY+ +GDSLDLV + A++GRGKRT VYGAFLLA Y++N + +
Sbjct: 759 SGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAYYGRGKRTSVYGAFLLAAYNANTQTY 818
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
+SIC IGTGFSEA LEE L VI +P+P+Y + PDVWFEP
Sbjct: 819 ESICNIGTGFSEANLEELHKELSPLVIDRPKPFYTHSTVPKDQPDVWFEP 868
>gi|322697185|gb|EFY88968.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Metarhizium
acridum CQMa 102]
Length = 899
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 271/583 (46%), Positives = 368/583 (63%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G VP+ L F +I T R++I LR VM TP+DL+P V L NK+AP
Sbjct: 235 WKPGSPVPYAALCQTFSLIEMTTKRLIIMGHCSLFLRQVMRLTPDDLLPTVLLMINKLAP 294
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ +K +E+GDLGLVA SRS+Q M KP PLT
Sbjct: 295 DYAGIELGIGESLIMKAIGETTGRSLQVIKADQKEIGDLGLVAVKSRSTQPTMFKPKPLT 354
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
+ V IA G +Q +K + IK LL AA E +Y+IR
Sbjct: 355 VRGVHQGLMNIATVTGNGAQGRKVDGIKKLLSAADAYSTVKADITKDKGGPSEAKYIIRF 414
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
L+ KLR+GLAE+T+L +L QA V +E K + +E I+K V+S LP Y+ I+
Sbjct: 415 LEGKLRLGLAERTVLVSLAQAIVCHEAEQKGKVPSTTDMENGESILKTVYSELPSYDAII 474
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PA+L+ G+ L C PG+P+ PMLAKPTK ++E++++F+ +FTCEYKYDGERAQIH
Sbjct: 475 PAVLSHGIMKLRECCKLRPGVPLKPMLAKPTKAITEVLDRFEGQKFTCEYKYDGERAQIH 534
Query: 470 YLE-------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
Y+ G I+SRN+E + K+PD++ + K +SFVL
Sbjct: 535 YVARDSGQELSRETSGAAKQAAGGVASIFSRNSEDLSKKYPDILAKLHSWVKNDTKSFVL 594
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D ++K+LPFQ L TR +K+V L D+KV VC++AFD+LY NG P++++ LR R
Sbjct: 595 DCETVAWDVSEKKVLPFQQLMTRKKKDVKLEDVKVKVCVFAFDLLYLNGLPVVEKSLRER 654
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSK 629
RE L SF G F FAT + +LDEIQ FLD +V ASCEGL++K +D ++ YEPSK
Sbjct: 655 RELLQQSFAPVEGEFSFATYMDGQELDEIQLFLDESVKASCEGLMVKMLDGTESGYEPSK 714
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ +GDSLDLV + A+HGRGKRT VYGAFLLACY+ N+ ++++C IG
Sbjct: 715 RSRNWLKVKKDYLAGVGDSLDLVVLGAYHGRGKRTSVYGAFLLACYNPANDTYETVCNIG 774
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
TGFSE +LEE + L VI +P+P+Y PDVWFEP
Sbjct: 775 TGFSEQVLEELHAQLSEIVIDRPKPFYSHSAGGQHQPDVWFEP 817
>gi|358058970|dbj|GAA95368.1| hypothetical protein E5Q_02023.3 [Mixia osmundae IAM 14324]
Length = 1044
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/582 (46%), Positives = 381/582 (65%), Gaps = 10/582 (1%)
Query: 157 KEKIAELKSNIVLLKKKAG---EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILIT 213
++K+ +K + KKK G E V W+ G+ VP+ L F +I + R+ I+
Sbjct: 387 QDKVQAVKLAEIFTKKKIGASTEIGGHNVLDWKAGDPVPYASLVKTFQLIEGTSKRLEIS 446
Query: 214 DIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHV 273
+ L V++ +PEDL VVYL N++ P +EGLELGIG+ + KA+AEA GR + V
Sbjct: 447 AFLSAYLLAVIQRSPEDLTRVVYLCINRLCPDYEGLELGIGEGLLQKAIAEATGRGLAQV 506
Query: 274 KKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKA 333
K Y + GDLGLVA++SR Q M K PL + VF + IA +G++SQ KK IK
Sbjct: 507 KADYVKTGDLGLVAQSSRKVQPTMFKQKPLDVRVVFKNLKDIAAASGQNSQAKKTGIIKK 566
Query: 334 LLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEE--- 390
LL E +++IR L+ KLRIGLAE+T+L AL A V +E Q+ LE+
Sbjct: 567 LLAGCEGSEAKFVIRSLEGKLRIGLAERTVLIALATAVVRHEIEQSGKKISQAALEQRIE 626
Query: 391 -AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
++KQVFS LP Y+KIVPALL G+ L + C+ T GIP+ PMLAKPTK ++E++++
Sbjct: 627 AGQDMIKQVFSELPSYDKIVPALLEQGIDKLHDVCALTAGIPLKPMLAKPTKAITEVLDR 686
Query: 450 FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
F+ +FTCEYKYDGERAQ+H LEDGS++++SRN+E + K+PD+V + R KPSV+SFV
Sbjct: 687 FEGQDFTCEYKYDGERAQVHMLEDGSIKVFSRNSEDMSIKYPDLVEQLPRCIKPSVKSFV 746
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
+D E A+ ++++++LPFQ LS R RK V + D+ V V ++AFD+LY NG+ LL+ L
Sbjct: 747 IDAECTAWSKDEKRLLPFQELSKRKRKGVKIEDVTVRVKLFAFDLLYLNGETLLKTDLDS 806
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPS 628
RR+ L + F F FAT+ + D++ IQ FLD ++ CEGL++K + + A YEPS
Sbjct: 807 RRKLLREHFSPVANEFDFATSADASDVEHIQAFLDESIKQGCEGLMVKMLHGQGAYYEPS 866
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
+RS+NWLK+KKDY++ +GDS DL I +HGRGKRT VYGAFLLACYD ++E +Q++CK+
Sbjct: 867 RRSMNWLKVKKDYLQGVGDSFDLTVIGGYHGRGKRTAVYGAFLLACYDPDSESYQAVCKL 926
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
GTGFSE L+ + L+ K R YY T +PDV+FEP
Sbjct: 927 GTGFSEEALDSHYTVLKPHECGK-RGYYEVG-TATPDVYFEP 966
>gi|358058971|dbj|GAA95369.1| hypothetical protein E5Q_02023.4 [Mixia osmundae IAM 14324]
Length = 871
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/582 (46%), Positives = 381/582 (65%), Gaps = 10/582 (1%)
Query: 157 KEKIAELKSNIVLLKKKAG---EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILIT 213
++K+ +K + KKK G E V W+ G+ VP+ L F +I + R+ I+
Sbjct: 214 QDKVQAVKLAEIFTKKKIGASTEIGGHNVLDWKAGDPVPYASLVKTFQLIEGTSKRLEIS 273
Query: 214 DIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHV 273
+ L V++ +PEDL VVYL N++ P +EGLELGIG+ + KA+AEA GR + V
Sbjct: 274 AFLSAYLLAVIQRSPEDLTRVVYLCINRLCPDYEGLELGIGEGLLQKAIAEATGRGLAQV 333
Query: 274 KKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKA 333
K Y + GDLGLVA++SR Q M K PL + VF + IA +G++SQ KK IK
Sbjct: 334 KADYVKTGDLGLVAQSSRKVQPTMFKQKPLDVRVVFKNLKDIAAASGQNSQAKKTGIIKK 393
Query: 334 LLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEE--- 390
LL E +++IR L+ KLRIGLAE+T+L AL A V +E Q+ LE+
Sbjct: 394 LLAGCEGSEAKFVIRSLEGKLRIGLAERTVLIALATAVVRHEIEQSGKKISQAALEQRIE 453
Query: 391 -AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
++KQVFS LP Y+KIVPALL G+ L + C+ T GIP+ PMLAKPTK ++E++++
Sbjct: 454 AGQDMIKQVFSELPSYDKIVPALLEQGIDKLHDVCALTAGIPLKPMLAKPTKAITEVLDR 513
Query: 450 FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
F+ +FTCEYKYDGERAQ+H LEDGS++++SRN+E + K+PD+V + R KPSV+SFV
Sbjct: 514 FEGQDFTCEYKYDGERAQVHMLEDGSIKVFSRNSEDMSIKYPDLVEQLPRCIKPSVKSFV 573
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
+D E A+ ++++++LPFQ LS R RK V + D+ V V ++AFD+LY NG+ LL+ L
Sbjct: 574 IDAECTAWSKDEKRLLPFQELSKRKRKGVKIEDVTVRVKLFAFDLLYLNGETLLKTDLDS 633
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPS 628
RR+ L + F F FAT+ + D++ IQ FLD ++ CEGL++K + + A YEPS
Sbjct: 634 RRKLLREHFSPVANEFDFATSADASDVEHIQAFLDESIKQGCEGLMVKMLHGQGAYYEPS 693
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
+RS+NWLK+KKDY++ +GDS DL I +HGRGKRT VYGAFLLACYD ++E +Q++CK+
Sbjct: 694 RRSMNWLKVKKDYLQGVGDSFDLTVIGGYHGRGKRTAVYGAFLLACYDPDSESYQAVCKL 753
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
GTGFSE L+ + L+ K R YY T +PDV+FEP
Sbjct: 754 GTGFSEEALDSHYTVLKPHECGK-RGYYEVG-TATPDVYFEP 793
>gi|302406130|ref|XP_003000901.1| DNA ligase [Verticillium albo-atrum VaMs.102]
gi|261360159|gb|EEY22587.1| DNA ligase [Verticillium albo-atrum VaMs.102]
Length = 893
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/582 (45%), Positives = 377/582 (64%), Gaps = 36/582 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+KG+ VP+ L F ++ T R+ I LR V+ TP+DL+P V L NK+AP
Sbjct: 230 WKKGDPVPYAALCKTFSLVELTTKRLEIMAHCSKFLRQVLRLTPDDLLPTVLLMINKLAP 289
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GRT +K+ +E+GDLGLVA SRS+Q M KP PLT
Sbjct: 290 DYAGIELGIGESLIMKAIGESTGRTLQIIKQDQKEIGDLGLVAVKSRSTQPTMFKPKPLT 349
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC--------------EPQYLIRLL 350
+ V IA G +Q +K + IK LL +A E ++LIR L
Sbjct: 350 VRGVHKGLMGIATVTGNGAQGRKVDGIKKLLSSADAAGGKVDISKDKGGPSEAKFLIRFL 409
Query: 351 QSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVP 410
+ KLR+GLAE+T+L +L QA V +E +K +E+A ++K V+S LP Y+ I+P
Sbjct: 410 EGKLRLGLAERTVLVSLAQAVVNHEASAKDLVASPEDVEKAEAMLKTVYSELPSYDVIIP 469
Query: 411 ALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY 470
A++ G+ NL C PG+P+ PMLAKPTK ++E++++F++ FTCEYKYDGERAQIHY
Sbjct: 470 AMVEHGIMNLREHCKLKPGVPLKPMLAKPTKAITEVLDRFENQTFTCEYKYDGERAQIHY 529
Query: 471 LE-------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLD 511
+ +G I+SRN+E + K+PD++ + KP +SFVLD
Sbjct: 530 VAKSADEELSESMPGATKEAANGVANIFSRNSEDLSKKYPDILAKLHTWVKPDTKSFVLD 589
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
CE VA+D ++K+LPFQ L TR +K+V + D+KV VC++AFD+LY NG+ L+++ LR RR
Sbjct: 590 CETVAWDVVEKKVLPFQQLMTRKKKDVKIEDVKVKVCVFAFDLLYLNGEALVEKSLRHRR 649
Query: 572 EHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKR 630
+ + ++F G F AT++ +L++IQ+FLD +V ASCEGL++K +D ++ YEPSKR
Sbjct: 650 DLMVEAFAPVEGEFSLATSMDGQELEQIQEFLDESVKASCEGLMVKMLDGTESGYEPSKR 709
Query: 631 SLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGT 690
S NWLK+KKDY+ IGDSLDLV + A+HG+GKRT VYGAFLLACY+ + E ++++C IGT
Sbjct: 710 SRNWLKIKKDYLAGIGDSLDLVVLGAYHGKGKRTSVYGAFLLACYNPSGEVYETVCNIGT 769
Query: 691 GFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
GFSEA+LEE L VI +P+P+Y PDVWFEP
Sbjct: 770 GFSEAVLEELHKQLSEIVIDRPKPFYSHSAGGQHQPDVWFEP 811
>gi|358058968|dbj|GAA95366.1| hypothetical protein E5Q_02023.1 [Mixia osmundae IAM 14324]
Length = 1404
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/582 (46%), Positives = 381/582 (65%), Gaps = 10/582 (1%)
Query: 157 KEKIAELKSNIVLLKKKAG---EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILIT 213
++K+ +K + KKK G E V W+ G+ VP+ L F +I + R+ I+
Sbjct: 747 QDKVQAVKLAEIFTKKKIGASTEIGGHNVLDWKAGDPVPYASLVKTFQLIEGTSKRLEIS 806
Query: 214 DIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHV 273
+ L V++ +PEDL VVYL N++ P +EGLELGIG+ + KA+AEA GR + V
Sbjct: 807 AFLSAYLLAVIQRSPEDLTRVVYLCINRLCPDYEGLELGIGEGLLQKAIAEATGRGLAQV 866
Query: 274 KKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKA 333
K Y + GDLGLVA++SR Q M K PL + VF + IA +G++SQ KK IK
Sbjct: 867 KADYVKTGDLGLVAQSSRKVQPTMFKQKPLDVRVVFKNLKDIAAASGQNSQAKKTGIIKK 926
Query: 334 LLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEE--- 390
LL E +++IR L+ KLRIGLAE+T+L AL A V +E Q+ LE+
Sbjct: 927 LLAGCEGSEAKFVIRSLEGKLRIGLAERTVLIALATAVVRHEIEQSGKKISQAALEQRIE 986
Query: 391 -AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
++KQVFS LP Y+KIVPALL G+ L + C+ T GIP+ PMLAKPTK ++E++++
Sbjct: 987 AGQDMIKQVFSELPSYDKIVPALLEQGIDKLHDVCALTAGIPLKPMLAKPTKAITEVLDR 1046
Query: 450 FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
F+ +FTCEYKYDGERAQ+H LEDGS++++SRN+E + K+PD+V + R KPSV+SFV
Sbjct: 1047 FEGQDFTCEYKYDGERAQVHMLEDGSIKVFSRNSEDMSIKYPDLVEQLPRCIKPSVKSFV 1106
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
+D E A+ ++++++LPFQ LS R RK V + D+ V V ++AFD+LY NG+ LL+ L
Sbjct: 1107 IDAECTAWSKDEKRLLPFQELSKRKRKGVKIEDVTVRVKLFAFDLLYLNGETLLKTDLDS 1166
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPS 628
RR+ L + F F FAT+ + D++ IQ FLD ++ CEGL++K + + A YEPS
Sbjct: 1167 RRKLLREHFSPVANEFDFATSADASDVEHIQAFLDESIKQGCEGLMVKMLHGQGAYYEPS 1226
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
+RS+NWLK+KKDY++ +GDS DL I +HGRGKRT VYGAFLLACYD ++E +Q++CK+
Sbjct: 1227 RRSMNWLKVKKDYLQGVGDSFDLTVIGGYHGRGKRTAVYGAFLLACYDPDSESYQAVCKL 1286
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
GTGFSE L+ + L+ K R YY T +PDV+FEP
Sbjct: 1287 GTGFSEEALDSHYTVLKPHECGK-RGYYEVG-TATPDVYFEP 1326
>gi|358058969|dbj|GAA95367.1| hypothetical protein E5Q_02023.2 [Mixia osmundae IAM 14324]
Length = 1165
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 270/582 (46%), Positives = 381/582 (65%), Gaps = 10/582 (1%)
Query: 157 KEKIAELKSNIVLLKKKAG---EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILIT 213
++K+ +K + KKK G E V W+ G+ VP+ L F +I + R+ I+
Sbjct: 508 QDKVQAVKLAEIFTKKKIGASTEIGGHNVLDWKAGDPVPYASLVKTFQLIEGTSKRLEIS 567
Query: 214 DIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHV 273
+ L V++ +PEDL VVYL N++ P +EGLELGIG+ + KA+AEA GR + V
Sbjct: 568 AFLSAYLLAVIQRSPEDLTRVVYLCINRLCPDYEGLELGIGEGLLQKAIAEATGRGLAQV 627
Query: 274 KKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKA 333
K Y + GDLGLVA++SR Q M K PL + VF + IA +G++SQ KK IK
Sbjct: 628 KADYVKTGDLGLVAQSSRKVQPTMFKQKPLDVRVVFKNLKDIAAASGQNSQAKKTGIIKK 687
Query: 334 LLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEE--- 390
LL E +++IR L+ KLRIGLAE+T+L AL A V +E Q+ LE+
Sbjct: 688 LLAGCEGSEAKFVIRSLEGKLRIGLAERTVLIALATAVVRHEIEQSGKKISQAALEQRIE 747
Query: 391 -AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
++KQVFS LP Y+KIVPALL G+ L + C+ T GIP+ PMLAKPTK ++E++++
Sbjct: 748 AGQDMIKQVFSELPSYDKIVPALLEQGIDKLHDVCALTAGIPLKPMLAKPTKAITEVLDR 807
Query: 450 FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
F+ +FTCEYKYDGERAQ+H LEDGS++++SRN+E + K+PD+V + R KPSV+SFV
Sbjct: 808 FEGQDFTCEYKYDGERAQVHMLEDGSIKVFSRNSEDMSIKYPDLVEQLPRCIKPSVKSFV 867
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
+D E A+ ++++++LPFQ LS R RK V + D+ V V ++AFD+LY NG+ LL+ L
Sbjct: 868 IDAECTAWSKDEKRLLPFQELSKRKRKGVKIEDVTVRVKLFAFDLLYLNGETLLKTDLDS 927
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM-DRDATYEPS 628
RR+ L + F F FAT+ + D++ IQ FLD ++ CEGL++K + + A YEPS
Sbjct: 928 RRKLLREHFSPVANEFDFATSADASDVEHIQAFLDESIKQGCEGLMVKMLHGQGAYYEPS 987
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
+RS+NWLK+KKDY++ +GDS DL I +HGRGKRT VYGAFLLACYD ++E +Q++CK+
Sbjct: 988 RRSMNWLKVKKDYLQGVGDSFDLTVIGGYHGRGKRTAVYGAFLLACYDPDSESYQAVCKL 1047
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
GTGFSE L+ + L+ K R YY T +PDV+FEP
Sbjct: 1048 GTGFSEEALDSHYTVLKPHECGK-RGYYEVG-TATPDVYFEP 1087
>gi|195431541|ref|XP_002063795.1| GK15713 [Drosophila willistoni]
gi|194159880|gb|EDW74781.1| GK15713 [Drosophila willistoni]
Length = 744
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/572 (45%), Positives = 373/572 (65%), Gaps = 9/572 (1%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P A W+ P++ L+ F +I GR+ + D + N +VM +PEDL+P VY
Sbjct: 108 YHPLKHAYWKAKGVTPYLALARTFQVIEETKGRLKMIDTLSNFFCSVMLVSPEDLLPSVY 167
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++APA+EGLELG+ D +++KA+ +A GR +H+K Q GDLG+VA+ SR SQ M
Sbjct: 168 LSINQLAPAYEGLELGVADTTLMKAICKATGRNLAHIKSQTHLTGDLGIVAEQSRVSQRM 227
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M +P PL + VF + +AK +G + K + + VA E ++ IR L KLRI
Sbjct: 228 MFRPAPLNLRGVFQKLKEVAKISG----QSKMTLVYDVFVACRLSEARFFIRSLIGKLRI 283
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPN-----IQSPLEEAAKIVKQVFSVLPVYEKIVPA 411
G+AEQ+LL AL A V H + N + + E ++K + P Y+ I+PA
Sbjct: 284 GIAEQSLLTALALALVKKNHHEECKLNKVGDVYKDEIAETTLLLKTTYCQCPNYDIIIPA 343
Query: 412 LLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL 471
+L + LS C PG+P+ PMLA+PTKGV E++ +F M TCE+KYDGERAQIH
Sbjct: 344 ILKYDIKELSTRCPMHPGMPLRPMLAQPTKGVHEVLERFGGMHITCEWKYDGERAQIHCN 403
Query: 472 EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
E G + I+SRN+E NT K+PD++ K V ++++D EIVA+D E+++ILPFQ LS
Sbjct: 404 EQGEISIFSRNSENNTAKYPDLIARSKNFIKKPVETYIIDSEIVAWDVERKQILPFQVLS 463
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
TR RKNV + +IKV VC+Y FD+LY NG L+ + L RR+ L + F+E G ++FAT L
Sbjct: 464 TRKRKNVDIDEIKVQVCVYIFDLLYINGMALVTKPLSERRKLLLEHFQEVEGEWKFATAL 523
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
+ D+DE+Q+FL+ +V +CEGL++KT+D +ATYE +KRS NWLKLKKDY+ ++GDSLDL
Sbjct: 524 NTNDMDEVQQFLEESVKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDL 583
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
V + + G+G+RTG +G FLLACYD+ NEE+QSICKIGTGF++ L+ S SL VI
Sbjct: 584 VVLGGYRGKGRRTGTFGGFLLACYDAENEEYQSICKIGTGFTDEDLKVHSESLGKSVISG 643
Query: 712 PRPYYRFADTISPDVWFEPTERPETSNSPASI 743
P+ YYR+ ++ PD WFEP + E + S+
Sbjct: 644 PKSYYRYDSSLEPDAWFEPVQVWEVKCADLSL 675
>gi|63054532|ref|NP_593318.2| ATP-dependent DNA ligase Cdc17 [Schizosaccharomyces pombe 972h-]
gi|118774|sp|P12000.1|DNLI1_SCHPO RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|4925|emb|CAA28754.1| DNA ligase [Schizosaccharomyces pombe]
gi|159883924|emb|CAB08176.2| ATP-dependent DNA ligase Cdc17 [Schizosaccharomyces pombe]
Length = 768
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/535 (48%), Positives = 353/535 (65%), Gaps = 3/535 (0%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
F I N + R+ I DI+ ++ P DL+ VYL+ NK+ P + GLELGIG++ I
Sbjct: 155 AFTKIENTSKRLEIIDIMGTYFFGILRDHPSDLLACVYLSINKLGPDYSGLELGIGESII 214
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKE 318
+KA+ E+ G+T +K + ++GDLGLVA+ SR +Q M KP LTI +FD+ + IA+
Sbjct: 215 MKAIGESTGQTLQQIKLSFHKVGDLGLVAQTSRQNQPTMFKPAALTIPFLFDSLKKIAQM 274
Query: 319 AGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHS 378
+G SQ +K IK LL + EP+YLIR L+ KLR+ LAE+T+L AL A
Sbjct: 275 SGNQSQNRKIGVIKRLLSSCEGAEPKYLIRALEGKLRLQLAEKTILVALANATAQYHADK 334
Query: 379 KPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAK 438
Q E +I++ V+ LP Y+ IVP L+ G+ L TC TPGIP PMLAK
Sbjct: 335 NGEKLSQQDRIEGEQILRDVYCQLPSYDLIVPHLIEHGLGTLRETCKLTPGIPTKPMLAK 394
Query: 439 PTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVS 498
PTK +SE++N F FTCEYKYDGERAQ+H+ EDG ++SRN+E + ++PD+ ++VS
Sbjct: 395 PTKQISEVLNTFDQAAFTCEYKYDGERAQVHFTEDGKFYVFSRNSENMSVRYPDISVSVS 454
Query: 499 RLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRN 558
+ KKP RSF+LDCE V +DR++ KILPFQ L+TR RK+V + DIKV C++AFDILY N
Sbjct: 455 KWKKPDARSFILDCEAVGWDRDENKILPFQKLATRKRKDVKIGDIKVRACLFAFDILYLN 514
Query: 559 GQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKT 618
GQPLL+ L RR+ LY F+ G F FA ++ I++FL+ +V SCEGL++K
Sbjct: 515 GQPLLETPLNERRKLLYSMFQPSTGDFTFAKHSDQKSIESIEEFLEESVKDSCEGLMVKM 574
Query: 619 MDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDS 677
++ D+ YEPSKRS +WLK+KKDY+ +GDSLDL+ I A++G+GKRT VYGAFLL CYD
Sbjct: 575 LEGPDSHYEPSKRSRHWLKVKKDYLSGVGDSLDLIVIGAYYGKGKRTSVYGAFLLGCYDP 634
Query: 678 NNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
+ E QSICK+GTGFSE LE + L+ VI K + +Y +D PDVWFEP
Sbjct: 635 DTETVQSICKLGTGFSEEHLETFYNQLKDIVISKKKDFYAHSDVPAHQPDVWFEP 689
>gi|346971415|gb|EGY14867.1| DNA ligase [Verticillium dahliae VdLs.17]
Length = 893
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/582 (45%), Positives = 375/582 (64%), Gaps = 36/582 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W KG+ VP+ L F ++ T R+ I LR V+ TP+DL+P V L NK+AP
Sbjct: 230 WNKGDPVPYAALCKTFSLVELTTKRLEIMAHCSKFLRQVLRLTPDDLLPTVLLMINKLAP 289
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GRT +K+ +E+GDLGLVA SRS+Q M KP PLT
Sbjct: 290 DYAGIELGIGESLIMKAIGESTGRTLQIIKQDQKEIGDLGLVAVKSRSTQPTMFKPKPLT 349
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC--------------EPQYLIRLL 350
+ V IA G +Q +K + IK LL +A E ++LIR L
Sbjct: 350 VRGVHKGLMGIATVTGNGAQGRKVDGIKKLLSSADAAGGKVDISKDKGGPSEAKFLIRFL 409
Query: 351 QSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVP 410
+ KLR+GLAE+T+L +L QA V +E K +E+A ++K V+S LP Y+ I+P
Sbjct: 410 EGKLRLGLAERTVLVSLAQAVVNHEASVKDLVASPEDVEKAEAMLKTVYSELPSYDVIIP 469
Query: 411 ALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY 470
A++ G+ NL C PG+P+ PMLAKPTK ++E++++F++ FTCEYKYDGERAQIHY
Sbjct: 470 AMVEHGIMNLREHCKLKPGVPLKPMLAKPTKAITEVLDRFENQTFTCEYKYDGERAQIHY 529
Query: 471 LE-------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLD 511
+ +G I+SRN+E + K+PD++ + KP +SFVLD
Sbjct: 530 VAKSADEELSQSMPGATKEAANGVANIFSRNSEDLSKKYPDILAKLHTWVKPDTKSFVLD 589
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
CE VA+D ++K+LPFQ L TR +K+V + D+KV VC++AFD+LY NG+ L+++ LR RR
Sbjct: 590 CETVAWDVVEKKVLPFQQLMTRKKKDVKIDDVKVKVCVFAFDLLYLNGEALVEKSLRHRR 649
Query: 572 EHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKR 630
+ + ++F G F AT++ +L++IQ+FLD +V ASCEGL++K +D ++ YEPSKR
Sbjct: 650 DLMVEAFAPVEGEFSLATSMDGQELEQIQEFLDESVKASCEGLMVKMLDGTESGYEPSKR 709
Query: 631 SLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGT 690
S NWLK+KKDY+ IGDSLDLV + A+HG+GKRT VYGAFLLACY+ + E ++++C IGT
Sbjct: 710 SRNWLKIKKDYLAGIGDSLDLVVLGAYHGKGKRTSVYGAFLLACYNPSGEVYETVCNIGT 769
Query: 691 GFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
GFSEA+LEE L VI +P+P+Y PDVWFEP
Sbjct: 770 GFSEAVLEELHKQLSEIVIDRPKPFYSHSAGGQHQPDVWFEP 811
>gi|225559355|gb|EEH07638.1| DNA ligase [Ajellomyces capsulatus G186AR]
Length = 888
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 287/646 (44%), Positives = 390/646 (60%), Gaps = 47/646 (7%)
Query: 128 DNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEK 187
+ P+ +KES + + + K KIA+ K V K DP W+
Sbjct: 159 EKPVAEDKESSSAEQEDNISENDDDLAEEKPKIAQKKRETVQQALKGSRKDP--YPDWKA 216
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE 247
GE VP+ L F +I T R++I L V+ TP+DL+P V L NK+A +
Sbjct: 217 GEPVPYAALCTTFSLIEMTTKRLIILSHCSLFLCQVLRLTPKDLLPTVQLMLNKLAADYA 276
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITK 307
G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT+
Sbjct: 277 GIELGIGESFIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLTVRG 336
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQYLIR 348
V + IAK G SQEKK + IK LL +A E +++IR
Sbjct: 337 VHEGLLAIAKTQGHGSQEKKISAIKKLLSSADATLAGKGSKGIDITQNKGGPSEAKFIIR 396
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNE---QHSKPPPNIQSPLEEAAKIVKQVFSVLPVY 405
L+ KLR+GLAE+T+L AL A V +E Q K P + L + I+K V+S LP Y
Sbjct: 397 FLEGKLRLGLAEKTVLVALAHAMVAHEVELQGKKAPSTEE--LGKGEAILKSVYSELPSY 454
Query: 406 EKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGER 465
E I+PA+L G++NL C PG+P+ PMLAKPTK ++E++++F+ FTCEYKYDGER
Sbjct: 455 EVIIPAMLEHGIFNLKENCKLQPGVPLKPMLAKPTKSITEVLDRFEGKNFTCEYKYDGER 514
Query: 466 AQIHYLE------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRS 507
AQIHY+ +G I+SRN+E + K+PD++ + K S
Sbjct: 515 AQIHYVAREEMHKYPSTASTLQKDGEGICAIFSRNSEDLSKKYPDILGKLENWVKQGTTS 574
Query: 508 FVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQL 567
FVLDCE VA+D +K+LPFQ L TR RK+V D+KV VC++AFD+L+ NG+P ++ L
Sbjct: 575 FVLDCETVAWDTVNKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTVKMTL 634
Query: 568 RVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYE 626
R RR L+D+F G F FA + DLDEIQ LD +V ASCEGL++K +D ++ YE
Sbjct: 635 RERRARLHDAFTPIEGEFVFAQHGDTNDLDEIQTLLDESVKASCEGLMVKMLDTEESGYE 694
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
PSKRS NWLK+KKDY+ IGDSLDLV + A++GRGKRT VYGAFLLA Y+++ + FQ++C
Sbjct: 695 PSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYYGRGKRTSVYGAFLLAAYNTSTQTFQTVC 754
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
IGTGFSEA+LEE SL VI +P+P+Y + PDVWFEP
Sbjct: 755 NIGTGFSEALLEELHKSLSPLVIDRPKPFYDHSSVPKDQPDVWFEP 800
>gi|83405065|gb|AAI10623.1| LIG1 protein [Homo sapiens]
Length = 801
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 253/524 (48%), Positives = 362/524 (69%), Gaps = 12/524 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 273 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 332
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 333 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 392
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 393 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 452
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 453 GLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 512
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+G+SE++ +F++ FTCEYKYDG+
Sbjct: 513 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQ 572
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 573 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 632
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 633 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 692
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 693 FVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 752
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+
Sbjct: 753 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKV 796
>gi|226478780|emb|CAX72885.1| ligase I, DNA, ATP-dependent [Schistosoma japonicum]
Length = 840
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 272/613 (44%), Positives = 373/613 (60%), Gaps = 46/613 (7%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P W++GE VP++ L+ F+ I + RI IT+ + N R+V +P D+ VY
Sbjct: 160 YHPIHDCNWKEGESVPYLSLAKTFECIETTSSRIKITETLSNFFRSVGLLSPFDMTSCVY 219
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++ PA+EG ELG+G+ ++KALA G H++ ++ GDLG+VA+ RS Q +
Sbjct: 220 LCLNRLGPAYEGTELGVGETVLLKALAATTGVGIEHIRSSLKKYGDLGVVAETIRSRQKI 279
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
+ P PLTI+ VF + IA +G +Q KK +++LLVA + E +YLIR L KLRI
Sbjct: 280 LSAPKPLTISLVFSKLKNIASMSGNSAQNKKLEIVRSLLVACRESETKYLIRSLSGKLRI 339
Query: 357 GLAEQTLLAALGQAAVYNEQHSKP---PPNI------------QSPLEEAAKIVKQVFSV 401
GLAEQT+L ALGQA H K P I ++ L+ A VK+ + V
Sbjct: 340 GLAEQTVLTALGQAVAMTPFHFKADDESPRIVDASNGISSEQWKTVLDTAVANVKRAYCV 399
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
P Y +++ +LLTD L C+ TPGIP+ PMLA PT G+SEI+ +F++ +FTCEYKY
Sbjct: 400 CPDYSRLIKSLLTDSHEALEQMCTITPGIPLKPMLASPTHGISEILKRFEECDFTCEYKY 459
Query: 462 DGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV-------LAVSRLKKPSVR-------- 506
DGERAQIH L G+ +YSRN E NT K+PD+V L S+L +V
Sbjct: 460 DGERAQIHILPSGASHVYSRNQEDNTTKYPDIVNNLMSRVLPESKLTPHAVELLSEIVKN 519
Query: 507 ----------------SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIY 550
S ++D E+VA+DR ILPFQ LSTR RK+V S +KV +C+Y
Sbjct: 520 SKKQDQSIGVIGNKLVSCIIDSEVVAWDRVAGHILPFQILSTRKRKDVDESTVKVQICVY 579
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
FDIL+ NG L+++ LR+RRE L + F G F AT+L S D+DEI FLD A+ +
Sbjct: 580 VFDILFINGVSLIEQTLRIRREILREVFPRIFGEFMIATSLDSSDIDEIATFLDEAIKGN 639
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
CEGL+IKT+D ++TYE +KRS +WLKLKKDY+E +GD+LDLV I FHG GKR G YG +
Sbjct: 640 CEGLMIKTLDHNSTYEIAKRSHSWLKLKKDYLEGVGDTLDLVVIGGFHGTGKRAGRYGGY 699
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
LLACYD EE+Q+ICKIGTG + L S +S + K +PYY++ ++ PD WFEP
Sbjct: 700 LLACYDPETEEYQTICKIGTGMKDDDLASFSEYFKSHAVDKAKPYYQYTSSLIPDQWFEP 759
Query: 731 TERPETSNSPASI 743
+ E + SI
Sbjct: 760 VQVWEVKAADLSI 772
>gi|62087162|dbj|BAD92028.1| DNA ligase I variant [Homo sapiens]
Length = 832
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 253/524 (48%), Positives = 362/524 (69%), Gaps = 12/524 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 304 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 363
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 364 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 423
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 424 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 483
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 484 GLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 543
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+G+SE++ +F++ FTCEYKYDG+
Sbjct: 544 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQ 603
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 604 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 663
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 664 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 723
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 724 FVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 783
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+
Sbjct: 784 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKV 827
>gi|320590780|gb|EFX03223.1| DNA ligase [Grosmannia clavigera kw1407]
Length = 872
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 272/585 (46%), Positives = 374/585 (63%), Gaps = 37/585 (6%)
Query: 183 ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKI 242
A W+ GE VP+ L F +I T R++I + LR V+ TP DL+P V L NK+
Sbjct: 198 ADWKAGEPVPYAALCQTFSLIEMTTKRLVIMEHCSLFLRQVLRLTPGDLLPTVLLMVNKL 257
Query: 243 APAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP 302
AP + G+ELGIG++ I+KA+ E GR+ + +K+ +E+GDLGLVA SRS+Q M KP
Sbjct: 258 APDYAGIELGIGESLIMKAIGETTGRSLAVIKQDQKEIGDLGLVAVKSRSTQPTMFKPKA 317
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLV-------------AATD--------C 341
LT+ V IA G +Q++K + IK LL A D
Sbjct: 318 LTVQGVHKGLMAIATVTGIGAQQRKVDGIKKLLAAADATATAAAGRRVAVDINKDKGGAS 377
Query: 342 EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHS------KPPPNIQSPLEEAAKIV 395
E +YL+R L+ KLR+GLAE+T+L +L QA +++E + K S LE+A ++
Sbjct: 378 EAKYLVRFLEGKLRLGLAEKTVLVSLAQAVMHHEAQTAGRADGKETQASASELEQAEAML 437
Query: 396 KQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEF 455
K V+S LP Y+ IVPA+L G+ L C PGIP+ PMLAKPTK ++E++++F++ F
Sbjct: 438 KTVYSELPSYDIIVPAMLEHGIMQLRKHCQLRPGIPLKPMLAKPTKAITEVLDRFENQTF 497
Query: 456 TCEYKYDGERAQIHYLE-------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSF 508
TCEYKYDGERAQIHY+ DG I+SRN+E + K+PD++ ++ +P SF
Sbjct: 498 TCEYKYDGERAQIHYVAADAATGTDGLSAIFSRNSEDLSKKYPDILAKLATWVRPGTTSF 557
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
VLDCE V +D E++K+LPFQ L TR RK+V ++D+KV VC++AFD+LY NG L++ LR
Sbjct: 558 VLDCETVGWDVEERKVLPFQQLMTRKRKDVKIADVKVRVCVFAFDLLYLNGAALVERPLR 617
Query: 569 VRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEP 627
RRE L + G FA+++ +LDEIQ FLD +V ASCEGL++K +D ++ YEP
Sbjct: 618 ERREQLASAVLPVEGELAFASSMDGRELDEIQTFLDESVRASCEGLMVKMLDGPESAYEP 677
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
SKRS NWLK+KKDY+ +GDSLDLV + A+ GRGKRT VYGAFLLACY + E F++IC
Sbjct: 678 SKRSRNWLKIKKDYLAGVGDSLDLVVLGAYFGRGKRTSVYGAFLLACYSPSAEAFETICN 737
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
IGTGFSEA+L+E L + VI +P+P+Y PDVWFEP
Sbjct: 738 IGTGFSEAVLDELHGQLSAIVIDRPKPFYAHSAGGQHQPDVWFEP 782
>gi|367027026|ref|XP_003662797.1| hypothetical protein MYCTH_2303831 [Myceliophthora thermophila ATCC
42464]
gi|347010066|gb|AEO57552.1| hypothetical protein MYCTH_2303831 [Myceliophthora thermophila ATCC
42464]
Length = 892
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/583 (45%), Positives = 374/583 (64%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W++G+ VP+ L F +I T R+ I LR V+ TP+DL+P V L NK+AP
Sbjct: 228 WKEGDPVPYAALCKTFSLIELTTKRLEILAHCSLFLRQVLRLTPDDLLPTVLLMVNKLAP 287
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
G+ELGIG++ I+KA+ E+ GR+ + +K+ +E+GDLGLVA SRS+Q M KP PLT
Sbjct: 288 DFAGIELGIGESLIMKAIGESTGRSLAVIKQDQKEIGDLGLVAVKSRSTQPTMFKPKPLT 347
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
+ V IA G +Q +K + IK LL AA E +Y++R
Sbjct: 348 VRGVHKGLMGIATVTGNGAQGRKVDGIKKLLSAADANGTGKVDITKDKGGPSEAKYIVRF 407
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
L+ KLR+GLAE+T++ AL QA V +E + K S LE+ I+K V+S LP Y+ I+
Sbjct: 408 LEGKLRLGLAEKTVIVALAQAVVAHEAYQKGTVPSTSDLEKGESILKTVYSELPSYDIII 467
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PA++ G+ NL C PG+P+ PMLAKPTK ++E++++F+ FTCEYKYDGERAQIH
Sbjct: 468 PAMVKYGIENLREHCKLRPGVPLKPMLAKPTKAITEVLDRFEGQTFTCEYKYDGERAQIH 527
Query: 470 YLED-------------------GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
Y+ G I+SRN+E + K+PD++ + K +SFVL
Sbjct: 528 YVAKDTDEQLSQSAMGATKEVGKGVAAIFSRNSEDLSKKYPDILAKLPTWVKEDTKSFVL 587
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D +++K+LPFQ L TR +K+V + D+KV VC++AFD+LY NG+ ++++ LR R
Sbjct: 588 DCESVAWDVKEKKVLPFQQLMTRKKKDVKVEDVKVTVCVFAFDLLYLNGEAVVKKSLRER 647
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSK 629
RE L +F+ G F FAT + +LDEIQ FLD +V ASCEGL++K +D ++ YEPSK
Sbjct: 648 RELLQQAFQPVEGEFAFATYMNGQELDEIQAFLDESVKASCEGLMVKMLDGEESGYEPSK 707
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ IGDSLDLV + A++G+GKRT VYGAFLLACY+ + ++++C IG
Sbjct: 708 RSRNWLKIKKDYLSGIGDSLDLVVLGAYYGKGKRTSVYGAFLLACYNPGTDTYETVCNIG 767
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
TGFSEA+LEE SL VI +P+P+Y PDVWFEP
Sbjct: 768 TGFSEAVLEELHKSLSEIVIDRPKPFYSHSSGSQHQPDVWFEP 810
>gi|358379416|gb|EHK17096.1| hypothetical protein TRIVIDRAFT_183439 [Trichoderma virens Gv29-8]
Length = 854
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/570 (46%), Positives = 368/570 (64%), Gaps = 24/570 (4%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W G VP+ L F +I T R++I + LR VM TP+DL+P V L NK+AP
Sbjct: 203 WTAGTPVPYAALCKTFSLIELTTKRLIIMEHCSRFLRQVMRLTPDDLLPTVLLMINKLAP 262
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ +K +E+GDLGLVA SRS+Q M KP PLT
Sbjct: 263 DYAGIELGIGESLIMKAIGETTGRSLQVIKADQKEIGDLGLVAVKSRSTQPTMFKPKPLT 322
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
+ V IA G +Q +K + IK LL ++ E +Y+IR
Sbjct: 323 VRGVHQGLMGIATVTGNGAQGRKVDGIKKLLSSSDSHLKEKVDITKDKGGPSEAKYIIRF 382
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
L+ KLR+GLA++T+L +L QA V +E K + LE I+K V+S LP Y+ I+
Sbjct: 383 LEGKLRLGLADRTVLVSLAQAVVAHEAEVKGKIPSTTDLENGESILKTVYSELPSYDVII 442
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PA+L G+ NL C PG+P+ PMLAKPTK ++E++++F+ FTCEYKYDGERAQIH
Sbjct: 443 PAMLQYGIANLREHCKLRPGVPLKPMLAKPTKAITEVLDRFEGQTFTCEYKYDGERAQIH 502
Query: 470 YLE------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQK 523
Y+ G I+SRN+E + K+PDV+ ++ K +SFVLDCE VA+D ++K
Sbjct: 503 YVSKDAPQGSGVSSIFSRNSEDLSKKYPDVLEKLNTWVKEDTKSFVLDCETVAWDVTEKK 562
Query: 524 ILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG 583
+LPFQ L TR RK+V DIKV VC++AFD+LY NG+ ++++ LR RRE L +F G
Sbjct: 563 VLPFQQLMTRKRKDVKAEDIKVKVCVFAFDLLYLNGEAVVEKSLRERRELLNTAFAPVEG 622
Query: 584 FFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYI 642
F FAT + +LDEIQ FLD +V ASCEGL++K +D +++ YEPSKRS NWLK+KKDY+
Sbjct: 623 EFAFATHMNGQELDEIQTFLDESVKASCEGLMVKMLDGKESGYEPSKRSRNWLKIKKDYL 682
Query: 643 ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSS 702
+GDSLDLV + A++G+GKRT VYGAFLLACY+++ + ++++C IGTGFSE +LE+ +
Sbjct: 683 SGVGDSLDLVVLGAYYGKGKRTSVYGAFLLACYNASTDTYETVCNIGTGFSEQVLEDLYA 742
Query: 703 SLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
L I +P+P+Y PDVWFEP
Sbjct: 743 QLSQITIARPKPFYSHSTGGQHQPDVWFEP 772
>gi|170083931|ref|XP_001873189.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650741|gb|EDR14981.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 816
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 273/568 (48%), Positives = 375/568 (66%), Gaps = 12/568 (2%)
Query: 172 KKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE-- 229
++ GE D K W+ GE V + L+ F +I T R+ T I+ + L V++ + +
Sbjct: 171 RRKGEVDVK--GGWKVGEPVLYAALTKAFSLIEATTKRLEKTAILTSFLLLVIQRSAKAD 228
Query: 230 --DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA 287
L+ VYL N+++P + G+ELGIG++ +IKA+AE+ GR+ S +K + GDLGLVA
Sbjct: 229 HNSLLQAVYLCINRLSPDYVGVELGIGESLLIKAIAESTGRSLSLIKADLKREGDLGLVA 288
Query: 288 KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLI 347
S++SQ + KP PLT+ VF R IA G SQ KK + I LL A D E +Y++
Sbjct: 289 MNSKNSQKTLFKPKPLTLPFVFSNLRDIALTTGNSSQAKKVSVITKLLAACQDFEAKYIV 348
Query: 348 RLLQSKLRIGLAEQTLLAALGQAAVYNEQHS----KPPPNIQSPLEEAAKIVKQVFSVLP 403
R L+ KLRIG AE+++L AL QA V E+ + + LEE A I+K V+S LP
Sbjct: 349 RSLEGKLRIGNAERSVLVALAQAVVLAEKEKVGKKWSQEKLTARLEEGANIIKAVYSELP 408
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
Y+K++PALL G+ L + C TPG+P+ PMLAKPTK + E++++F++ FTCEYKYDG
Sbjct: 409 SYDKVIPALLEVGIDGLRDKCKLTPGVPLKPMLAKPTKAIGEVLDRFENKRFTCEYKYDG 468
Query: 464 ERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQK 523
ERAQ+H LEDG+V+++SRN+E + K+PD+V + R K S +SFVLD E VA DR K
Sbjct: 469 ERAQVHKLEDGTVDVFSRNSEDMSKKYPDLVDQLPRCIKESTKSFVLDAEAVAIDRLTGK 528
Query: 524 ILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG 583
++PFQ LS R RK+V + DI+V VC++AFD+LY NG+PLLQ L RRE L F PG
Sbjct: 529 LMPFQELSRRKRKDVKVEDIQVQVCLFAFDLLYLNGEPLLQRPLYERRELLRQYFTPVPG 588
Query: 584 FFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYI 642
F FA + S +EIQ FL+ +V CEGL++K +D DA+ YEPS+RS+NWLKLKKDY+
Sbjct: 589 EFDFAKSSDSETTEEIQTFLEESVKDGCEGLMVKMLDSDASYYEPSRRSVNWLKLKKDYL 648
Query: 643 ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSS 702
+GDSLDLV + ++G+GKRT VYGAFLLACYDS +EE+Q+ICKIGTGFSE L+
Sbjct: 649 AGVGDSLDLVVVGGYYGKGKRTNVYGAFLLACYDSESEEYQTICKIGTGFSEENLQAHYD 708
Query: 703 SLRSKVIPKPRPYYRFADTISPDVWFEP 730
+L+ K R + PD+WFEP
Sbjct: 709 ALKPLETTKVRGDIKVGGA-KPDIWFEP 735
>gi|121698847|ref|XP_001267826.1| DNA ligase Cdc9, putative [Aspergillus clavatus NRRL 1]
gi|119395968|gb|EAW06400.1| DNA ligase Cdc9, putative [Aspergillus clavatus NRRL 1]
Length = 879
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 273/587 (46%), Positives = 373/587 (63%), Gaps = 44/587 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ + VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 211 WKPRQPVPYAALCKTFSLIEMTTKRLIILAHCSLFLRQVLRLTPQDLLPTVQLMINKLAA 270
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 271 DYAGIELGIGESFIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLT 330
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC----------------EPQYLIR 348
+ V + IAK G+ SQEKK + IK LL AA E ++++R
Sbjct: 331 VRGVHEGLLAIAKIQGQGSQEKKISAIKKLLSAADAATVGKGVDITKDKGGPSEAKFIVR 390
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSVLPV 404
L+ KLR+GLAE+T+L AL QA V +E K P P + + ++K V+S LP
Sbjct: 391 FLEGKLRLGLAEKTVLVALAQAVVAHEAAVKGEKLPTPE---KMAQGEAVLKTVYSELPA 447
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
YE I+PA+L G+ +L C PG+PI PMLAKPTK ++E++N+F+ +FTCEYKYDGE
Sbjct: 448 YEVIIPAMLEHGLLDLPKVCKLQPGVPIKPMLAKPTKSITEVLNRFEGKDFTCEYKYDGE 507
Query: 465 RAQIHYLEDGSVE------------------IYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
RAQIHY+ +++ I+SRN+E + K+PDV+ + K V+
Sbjct: 508 RAQIHYVAPDAIKHYPGATATLQRDSKGLSAIFSRNSEDLSKKYPDVLAKLDNWVKDGVK 567
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
SFVLDCE VA+D E +K+LPFQ L TR RK+V D+KV VCI+AFD+L+ NG+ +++
Sbjct: 568 SFVLDCETVAWDMENKKVLPFQQLMTRKRKDVKAEDVKVKVCIFAFDLLFLNGEATVKKS 627
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATY 625
LR RRE L+ SF G FQFA + DL+EIQ LD +V ASCEGL++K +D ++ Y
Sbjct: 628 LRDRRELLHSSFNVSEGEFQFAQHGDTNDLEEIQTLLDDSVKASCEGLMVKMLDTEESGY 687
Query: 626 EPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSI 685
EPSKRS NWLK+KKDY+ +GDSLDLV + A+HGRGKRT VYGAFLLA Y+S+ + ++++
Sbjct: 688 EPSKRSRNWLKVKKDYLAGVGDSLDLVVLGAYHGRGKRTSVYGAFLLAAYNSSTQTYETV 747
Query: 686 CKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
C IGTGFSEA LEE L I +P+P+Y + PDVWFEP
Sbjct: 748 CNIGTGFSEAALEEFYQELSPLTIDRPKPFYSHSTVPKDQPDVWFEP 794
>gi|425766642|gb|EKV05245.1| DNA ligase [Penicillium digitatum Pd1]
gi|425775293|gb|EKV13571.1| DNA ligase [Penicillium digitatum PHI26]
Length = 853
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 307/747 (41%), Positives = 432/747 (57%), Gaps = 67/747 (8%)
Query: 49 PRRKMSSSAPNAFQVLMSAAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKI 108
P+++ + + QV AA + + ++ + T ++T V EK
Sbjct: 24 PKKQTTLAFGGTRQVASCKAADTETKNNADGATVEDATNSAPTASLNKTESTKGVKREKS 83
Query: 109 QEVAEEPSNDLVKPISNQIDNPIDSEKES---QPTPPSPKKRKVNVNSVSAKEKIAELKS 165
E AEE V+P+S + + ES + PSPK N + V+ +EK ++
Sbjct: 84 VE-AEESDGSDVQPVSKRRRRASPKKSESIKLKIESPSPKASLKNPSDVTPEEKSPSVEE 142
Query: 166 NIV-------------LLKKKAGEFDPKMVAC-------WEKGERVPFIFLSLVFDMISN 205
L KK +F K+ W+ GE VP+ L F ++
Sbjct: 143 EEDPLESEDEDDLKPELTKKSIEKFQAKLQGSGKDPYPDWKAGEPVPYAALCTTFSLVEM 202
Query: 206 ETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEA 265
R+ ITD LR V+ TP D +P V L NK+A + G+ELGIG++ I+KA+ E
Sbjct: 203 TRKRLEITDHCSLFLRQVLRLTPADFLPTVQLMINKLAADYAGVELGIGESLIMKAIGEC 262
Query: 266 CGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQE 325
GR+ + +K +E+GDLGLVA SRS+Q M KP PLT+ V + IAK G SQ+
Sbjct: 263 TGRSLAIIKADQREIGDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLLGIAKVQGHGSQD 322
Query: 326 KKKNRIKALLVAATD-------------------CEPQYLIRLLQSKLRIGLAEQTLLAA 366
KK + IK LL AA E +Y++R L+ KLR+GLAE+T+L A
Sbjct: 323 KKISGIKKLLAAADADTSGKGGKGVDVTKDKGGPSEAKYIVRFLEGKLRLGLAEKTVLVA 382
Query: 367 LGQAAVYNEQHS--KPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
+ +A +E S K P+ + + E I K V+S LP YE I+PA+L G+ L C
Sbjct: 383 VSRAVQTHEAESTGKKIPSAEQ-MAEGENIFKTVYSELPAYEVIIPAVLEHGLLKLPEVC 441
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE------- 477
+PGIPI PMLAKPTK ++E++++F+ EFTCEYKYDGERAQIH++ SV
Sbjct: 442 KLSPGIPIKPMLAKPTKSITEVLDRFEGKEFTCEYKYDGERAQIHFVSPDSVHQYPGALD 501
Query: 478 -----------IYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP 526
I+SRN+E + K+PDV+ + K V+SFVLDCE VA+D E +K+LP
Sbjct: 502 TLQKDSKGLSSIFSRNSEDLSKKYPDVLGKLDTWVKSDVKSFVLDCETVAWDTEAKKVLP 561
Query: 527 FQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
FQ L TR RK+V D+KV VC+YAFD+L+ NG+P +++ LR RRE +++ F+ G FQ
Sbjct: 562 FQQLMTRKRKDVKAEDVKVKVCVYAFDLLFFNGEPCVKKSLRERRELMHECFQPVEGEFQ 621
Query: 587 FATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESI 645
FA S LDEIQ+ L+A+V ASCEGL++K +D ++ YEPSKRS NWLK+KKDY+ +
Sbjct: 622 FAQYGNSNVLDEIQELLEASVKASCEGLMVKMLDTAESGYEPSKRSRNWLKVKKDYLAGV 681
Query: 646 GDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR 705
GDSLDLV + A++GRGKRT VYGAFLLA Y+ +++ +++IC IGTGFSEA+LEE +L
Sbjct: 682 GDSLDLVVLGAYYGRGKRTSVYGAFLLAAYNPSSDTYETICNIGTGFSEALLEELHQTLV 741
Query: 706 SKVIPKPRPYYRFADT--ISPDVWFEP 730
VI +P+P+Y + PDVWFEP
Sbjct: 742 PLVIDRPKPFYTHSAVPKDQPDVWFEP 768
>gi|440639060|gb|ELR08979.1| hypothetical protein GMDG_00597 [Geomyces destructans 20631-21]
Length = 930
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/584 (44%), Positives = 376/584 (64%), Gaps = 38/584 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 267 WKPGEPVPYAALCTTFSLIEMTTKRLIIAAHCSLFLRQVLRLTPDDLLPTVLLMINKLAA 326
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ EA GR+ + +K+ +E+GDLGLVA SRS+Q M KP PLT
Sbjct: 327 DYAGIELGIGESLIMKAIGEATGRSLAVIKQDQKEIGDLGLVAVKSRSNQPTMYKPKPLT 386
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD--------------CEPQYLIRLL 350
+ + + IA G +Q +K + IK LL AA E ++++R L
Sbjct: 387 VRGIHKSLLRIAVMQGNGAQTRKVDGIKKLLSAADSEGGKVDLAKDKGGPSEAKFIVRFL 446
Query: 351 QSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP--LEEAAKIVKQVFSVLPVYEKI 408
+ KLR+GLAE+T+L +L QA V +E SK + S L + +++K V+S LP Y+ I
Sbjct: 447 EGKLRLGLAEKTVLVSLAQAMVCHETESKGRDKVPSTDQLAKGEQVLKAVYSELPSYDVI 506
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+PA++ G++NL C PG+P+ PMLAKPTK ++E++++F+ FTCEYKYDGERAQI
Sbjct: 507 IPAMVQHGIFNLRENCKLQPGVPLKPMLAKPTKAITEVLDRFEGQTFTCEYKYDGERAQI 566
Query: 469 HYLE-------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
HY+ G I+SRN+E + K+PD++ + KP +SFV
Sbjct: 567 HYVSKDSETKYQSSVPAAAKGTAGGLAAIFSRNSEDLSKKYPDILEKLGTWVKPETKSFV 626
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
LDCE VA+D ++K++PFQ L TR +K+V D+KV VC++AFD+L+ NG+ ++ + LR
Sbjct: 627 LDCETVAWDMVEKKVMPFQQLMTRKKKDVKTEDVKVKVCVFAFDLLFLNGEAIVGKPLRE 686
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPS 628
RR L+ +F G F FAT++ ++DEIQ FLD +V ASCEGL++K +D ++ YEPS
Sbjct: 687 RRSLLHTAFTPVEGEFAFATSMNGQEIDEIQTFLDDSVKASCEGLMVKMLDGVESGYEPS 746
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
KRS NWLK+KKDY+ IGDSLDLV + A+HG+GKRT VYGAFLLACY+ + E ++++C I
Sbjct: 747 KRSRNWLKIKKDYLAGIGDSLDLVVLGAYHGKGKRTSVYGAFLLACYNPSTERYETVCNI 806
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRFA--DTISPDVWFEP 730
GTGFSE +LE + L VI +P+P+Y + + PDVWFEP
Sbjct: 807 GTGFSEEVLETLHAQLADTVIDRPKPFYEHSKVNAHQPDVWFEP 850
>gi|115443382|ref|XP_001218498.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Aspergillus
terreus NIH2624]
gi|114188367|gb|EAU30067.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Aspergillus
terreus NIH2624]
Length = 873
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 274/588 (46%), Positives = 375/588 (63%), Gaps = 43/588 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F +I T R++I LR V+ TPEDL+P V L NK+A
Sbjct: 202 WKPGEPVPYAALCTTFSLIEMTTKRLVILAHCSLFLRQVLRLTPEDLLPTVQLMINKLAA 261
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 262 DYAGIELGIGESLIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLT 321
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQY 345
+ V + IAK G SQ+KK + IK LL AA E ++
Sbjct: 322 VRGVHEGLLAIAKVQGHGSQDKKISGIKKLLSAADAATAGKGSKGVDITKDKGGPSEAKF 381
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK--PPPNIQSPLEEAAKIVKQVFSVLP 403
++R L+ KLR+GLAE+T+L AL QA V +E K P+ + + + ++K V+S LP
Sbjct: 382 IVRFLEGKLRLGLAEKTVLVALAQAVVAHEAALKGEKTPSAEK-MAQGEAVLKTVYSELP 440
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
YE I+PA+L G++NL C PGIPI PMLAKPTK ++E++++F+ +FTCEYKYDG
Sbjct: 441 AYEVIIPAMLEHGLFNLGKVCKLQPGIPIKPMLAKPTKSITEVLDRFEGKDFTCEYKYDG 500
Query: 464 ERAQIHYLEDGSVE------------------IYSRNAERNTGKFPDVVLAVSRLKKPSV 505
ERAQIHY+ S+ I+SRN+E + K+PDV+ + K V
Sbjct: 501 ERAQIHYVSPDSIHEFPGATATLNQDTKGLCAIFSRNSEDLSKKYPDVMGKLEGWVKDGV 560
Query: 506 RSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQE 565
+SFVLDCE VA+D +K+LPFQ L TR RK+V D+KV VC++AFD+L+ NG+P +++
Sbjct: 561 KSFVLDCETVAWDTVNKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTVKK 620
Query: 566 QLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDAT 624
LR RRE L++SF+ G FQFA + LDEIQ L+ +V ASCEGL++K +D ++
Sbjct: 621 SLRERRELLHESFQVVEGEFQFAQFGNTNVLDEIQNLLEESVKASCEGLMVKMLDTEESG 680
Query: 625 YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQS 684
YEPSKRS NWLK+KKDY+ +GDSLDLV + A+HGRGKRT VYGAFLLA Y+++ + +++
Sbjct: 681 YEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAYHGRGKRTSVYGAFLLAAYNASTQTYET 740
Query: 685 ICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
IC IGTGFSEA LEE L VI + +P+Y + PDVWFEP
Sbjct: 741 ICNIGTGFSEADLEELHKELSPLVIDRAKPFYSHSTVPKDQPDVWFEP 788
>gi|226293865|gb|EEH49285.1| DNA ligase [Paracoccidioides brasiliensis Pb18]
Length = 912
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 301/710 (42%), Positives = 421/710 (59%), Gaps = 76/710 (10%)
Query: 66 SAAAKKKPSPQPNSSSSS--SSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPI 123
S KK+ SP+P ++ +S K R+ Q+PK V E + E E S +
Sbjct: 148 STPEKKRASPKPKTADKKPVASKAKGRSKSPQSPKK----VKEPVDETKESTSAE----- 198
Query: 124 SNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVA 183
+ +D+ ++ ++ + TP +K + V V LKS +G+ DP
Sbjct: 199 KDDVDS-VNDDEIGEETPEVAQKDRETVQQV--------LKS--------SGK-DP--YP 238
Query: 184 CWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIA 243
W+ G+ VP+ L F +I T R++I LR V+ TP DL+P V L NK+A
Sbjct: 239 DWKVGDPVPYAALCTTFSLIEMTTKRLVILSHCSLFLRQVLRLTPNDLLPTVQLMLNKLA 298
Query: 244 PAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPL 303
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PL
Sbjct: 299 ADYAGIELGIGESLIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPL 358
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQ 344
T+ V D IAK G SQ+KK + IK LL +A E +
Sbjct: 359 TVRGVHDGLLAIAKTQGHGSQDKKISAIKKLLSSADAAVAGKGSKGIDITHNKGGPSEAK 418
Query: 345 YLIRLLQSKLRIGLAEQTLLAALGQAAVYNE---QHSKPPPNIQSPLEEAAKIVKQVFSV 401
++IR L+ KLR+GLAE+T+L AL A V +E Q K P Q L + +I+K V+S
Sbjct: 419 FIIRFLEGKLRLGLAERTVLVALAHAMVAHEVELQGKKAPTTEQ--LAKGEEILKSVYSE 476
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
LP YE I+PA+L G++NL + C PG+P+ PMLAKPTK ++E++++F+ FTCEYKY
Sbjct: 477 LPSYEVIIPAMLEHGIFNLKDKCKLQPGVPLKPMLAKPTKSITEVLDRFEGKNFTCEYKY 536
Query: 462 DGERAQIHYLE------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKP 503
DGERAQIHY+ G I+SRN+E + K+PD++ + K
Sbjct: 537 DGERAQIHYISREAISEYRATASTLQKDGGGVCAIFSRNSEDLSKKYPDILSKLENWVKK 596
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLL 563
SFVLDCE VA+D +K+LPFQ L TR RK+V D+KV VC++AFD+L+ NG+P +
Sbjct: 597 GTTSFVLDCETVAWDVAGKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTV 656
Query: 564 QEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RD 622
++ LR RR L+++F G F FA + DL+EIQ LD +V ASCEGL++K +D +
Sbjct: 657 KKTLRERRSLLHEAFVPVEGEFVFAQHGDTSDLEEIQTLLDESVKASCEGLMVKMLDTEE 716
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+ YEPSKRS NWLK+KKDY+ IGDSLDLV + A++GRGKRT VYGAFLLA Y+ + +
Sbjct: 717 SGYEPSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYYGRGKRTSVYGAFLLAAYNPTTQNY 776
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
++IC IGTGFSEA+LEE S+L VI +P+P+Y + PDVWFEP
Sbjct: 777 ETICNIGTGFSEALLEELHSALSPLVIDRPKPFYDHSSVPKDQPDVWFEP 826
>gi|30962491|dbj|BAC76762.1| DNA ligase I [Coprinopsis cinerea]
Length = 825
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 290/673 (43%), Positives = 418/673 (62%), Gaps = 38/673 (5%)
Query: 67 AAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQ 126
A + + +P+P S ++SSSP K+ ++ K +S + E+ A EP D ++
Sbjct: 103 ATSSRHVTPEP-SEAASSSPVKKHVEGSRAVKPPHSDIDEE-SIAASEPEAD-----EDR 155
Query: 127 IDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWE 186
D ++ ++E P + K + LLKK E D K W+
Sbjct: 156 DDVLLEDDEELNPVGGTESK-----------------SARAALLKKD--EVDIK--GGWK 194
Query: 187 KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPED----LVPVVYLAANKI 242
G+ VP+ L+ F +I T R+ I+ L V++ + +D L+ VYL N++
Sbjct: 195 VGQPVPYAALAKTFSLIEATTKRLEKNAILTAFLLLVIQRSAKDDHKSLLQAVYLCINRL 254
Query: 243 APAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP 302
+P + G+ELGIG++ +IKA+AE+ GR+ + +K ++ GDLGLVA S++SQ + KP P
Sbjct: 255 SPDYVGIELGIGESLLIKAIAESTGRSLAVIKADLKKEGDLGLVAMNSKNSQKTLFKPKP 314
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LT+ VF + IA G SQ KK I LL A D E +Y++R L+ KLRIG AE++
Sbjct: 315 LTLPFVFTQLKDIALTTGNASQAKKVGIITKLLAACQDVEAKYIVRSLEGKLRIGNAERS 374
Query: 363 LLAALGQAAVYNEQHSKPPP----NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
+L +L AAV E+ + + LEE A+I+K V+S LP Y+ +VPALL G+
Sbjct: 375 VLVSLAHAAVLAERERADKKWSQDKLTARLEEGAEIMKAVYSELPSYDSVVPALLEGGIK 434
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
L C TPGIP+ PMLAKPTK + E++++F++ FTCEYKYDGERAQIH L+DG+V +
Sbjct: 435 GLRERCKLTPGIPLKPMLAKPTKAIREVLDRFENKRFTCEYKYDGERAQIHRLDDGTVGV 494
Query: 479 YSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+SRN+E + K+PD+V +S+ K + +SFVLD E VA DR K++PFQ LS R RK+V
Sbjct: 495 FSRNSEDMSKKYPDLVDQLSKCIKKNTKSFVLDSEAVAIDRTTGKLMPFQELSRRKRKDV 554
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
+ DI+V VCI+AFD+LY NG+PL+ + L RR+ L F+ PG F FA + DE
Sbjct: 555 KVEDIQVRVCIFAFDLLYLNGEPLINKPLVERRDLLRKHFQVVPGEFDFAKSSDGESTDE 614
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAF 657
IQ FL+ +V CEGL++K ++ DA+ YEPS+RS+NWLKLKKDY+ +GDSLDLV + A+
Sbjct: 615 IQTFLEESVKDGCEGLMVKMLESDASNYEPSRRSVNWLKLKKDYLAGVGDSLDLVVVGAY 674
Query: 658 HGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYR 717
+G+GKRT YGAFLLACYD+++EE+Q+ICKIGTGFS+ L+ +L+ KPR Y +
Sbjct: 675 YGKGKRTNYYGAFLLACYDADSEEYQTICKIGTGFSDEALQTHYETLKPLEQTKPRGYIK 734
Query: 718 FADTISPDVWFEP 730
PD+WFEP
Sbjct: 735 IGGA-KPDIWFEP 746
>gi|380089931|emb|CCC12242.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 919
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/584 (45%), Positives = 373/584 (63%), Gaps = 38/584 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F +I R+LI + LR V+ TP+DL+P V L NK+AP
Sbjct: 254 WKAGEPVPYAALCTTFSLIEQTRKRLLIMEYCSLFLRQVLRLTPDDLLPTVLLMINKLAP 313
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ + +K +E+GDLGLVA SRS Q M KP PLT
Sbjct: 314 DYAGIELGIGESLIMKAIGETTGRSVAVIKNDQKEIGDLGLVAVKSRSKQPTMFKPKPLT 373
Query: 305 ITKVFDTFRLIAKE-AGKDSQEKKKNRIKALLVAATD---------------CEPQYLIR 348
I V IA G +Q+KK + IK LL AA E ++++R
Sbjct: 374 IRGVHKGLMDIATTMTGTGAQQKKVDGIKKLLSAADANSTGKVDIIKEKGGPSEAKFIVR 433
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ KLR+GLAE++++ +L QA + +E K +S +A I+K V+S LP Y I
Sbjct: 434 FLEGKLRLGLAEKSVIVSLAQAMIAHEFAQKGKVPSESDFSKAESILKTVYSELPSYNVI 493
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+PA+L G+ NL + C PG+P+ PMLA PTK ++E++++F+ FTCEYKYDGERAQI
Sbjct: 494 IPAMLQHGIMNLRDHCKLRPGVPLKPMLANPTKAITEVLDRFEGQTFTCEYKYDGERAQI 553
Query: 469 HYLED-------------------GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
HY+ G I+SRN+E + K+PDV+ + K +SFV
Sbjct: 554 HYVAKDAPKSDGDLSQVASKETGKGVAAIFSRNSEDLSQKYPDVLAKLPTWVKEGTKSFV 613
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
LDCE VA+D ++K+LPFQ L TR +K+V L D+KV VC++AFD+LY NGQ ++++ LR
Sbjct: 614 LDCESVAWDTVEKKVLPFQQLMTRKKKDVKLEDVKVKVCVFAFDLLYLNGQAVVEKSLRE 673
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPS 628
RRE L +F+ G F FAT++ +LDEIQ FLD +V ASCEGL++K +D ++ YEPS
Sbjct: 674 RRELLRSAFKPVEGEFSFATSMDGQELDEIQMFLDESVKASCEGLMVKMLDGAESGYEPS 733
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
KRS NWLK+KKDY+ IGDSLDLV + A+HG+GKRT V+GAFLLACY+ N++ ++++C I
Sbjct: 734 KRSRNWLKIKKDYLAGIGDSLDLVVLGAYHGKGKRTSVFGAFLLACYNPNSDTYETVCNI 793
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
GTGFS+ +L+E +SL +I +P+P+Y PDVWFEP
Sbjct: 794 GTGFSDEVLQELHASLSPIIIDRPKPFYAHSSGGQHQPDVWFEP 837
>gi|336263280|ref|XP_003346420.1| hypothetical protein SMAC_05315 [Sordaria macrospora k-hell]
Length = 934
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/584 (45%), Positives = 373/584 (63%), Gaps = 38/584 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F +I R+LI + LR V+ TP+DL+P V L NK+AP
Sbjct: 269 WKAGEPVPYAALCTTFSLIEQTRKRLLIMEYCSLFLRQVLRLTPDDLLPTVLLMINKLAP 328
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ + +K +E+GDLGLVA SRS Q M KP PLT
Sbjct: 329 DYAGIELGIGESLIMKAIGETTGRSVAVIKNDQKEIGDLGLVAVKSRSKQPTMFKPKPLT 388
Query: 305 ITKVFDTFRLIAKE-AGKDSQEKKKNRIKALLVAATD---------------CEPQYLIR 348
I V IA G +Q+KK + IK LL AA E ++++R
Sbjct: 389 IRGVHKGLMDIATTMTGTGAQQKKVDGIKKLLSAADANSTGKVDIIKEKGGPSEAKFIVR 448
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ KLR+GLAE++++ +L QA + +E K +S +A I+K V+S LP Y I
Sbjct: 449 FLEGKLRLGLAEKSVIVSLAQAMIAHEFAQKGKVPSESDFSKAESILKTVYSELPSYNVI 508
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+PA+L G+ NL + C PG+P+ PMLA PTK ++E++++F+ FTCEYKYDGERAQI
Sbjct: 509 IPAMLQHGIMNLRDHCKLRPGVPLKPMLANPTKAITEVLDRFEGQTFTCEYKYDGERAQI 568
Query: 469 HYLED-------------------GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
HY+ G I+SRN+E + K+PDV+ + K +SFV
Sbjct: 569 HYVAKDAPKSDGDLSQVASKETGKGVAAIFSRNSEDLSQKYPDVLAKLPTWVKEGTKSFV 628
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
LDCE VA+D ++K+LPFQ L TR +K+V L D+KV VC++AFD+LY NGQ ++++ LR
Sbjct: 629 LDCESVAWDTVEKKVLPFQQLMTRKKKDVKLEDVKVKVCVFAFDLLYLNGQAVVEKSLRE 688
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPS 628
RRE L +F+ G F FAT++ +LDEIQ FLD +V ASCEGL++K +D ++ YEPS
Sbjct: 689 RRELLRSAFKPVEGEFSFATSMDGQELDEIQMFLDESVKASCEGLMVKMLDGAESGYEPS 748
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
KRS NWLK+KKDY+ IGDSLDLV + A+HG+GKRT V+GAFLLACY+ N++ ++++C I
Sbjct: 749 KRSRNWLKIKKDYLAGIGDSLDLVVLGAYHGKGKRTSVFGAFLLACYNPNSDTYETVCNI 808
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
GTGFS+ +L+E +SL +I +P+P+Y PDVWFEP
Sbjct: 809 GTGFSDEVLQELHASLSPIIIDRPKPFYAHSSGGQHQPDVWFEP 852
>gi|297847214|ref|XP_002891488.1| hypothetical protein ARALYDRAFT_337048 [Arabidopsis lyrata subsp.
lyrata]
gi|297337330|gb|EFH67747.1| hypothetical protein ARALYDRAFT_337048 [Arabidopsis lyrata subsp.
lyrata]
Length = 625
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/385 (64%), Positives = 305/385 (79%), Gaps = 14/385 (3%)
Query: 359 AEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
+ QT++ VYNE+HSKPPPNI++PL+EAA IVK+VFSVLPVY+ IV ALLT GVW
Sbjct: 189 SSQTVIFMHKPLTVYNEEHSKPPPNIKNPLDEAATIVKEVFSVLPVYDLIVGALLTSGVW 248
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
NL TC TPG+P+ PMLAK T V I+ KF D FT EYKYDGERAQIHY+EDG++EI
Sbjct: 249 NLPKTCKLTPGVPVRPMLAKATTSVDLILEKFGDTVFTAEYKYDGERAQIHYMEDGTIEI 308
Query: 479 YSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+SR+AERNTGK+PDV LA+SR KKP+V+SF+LDCE+VA++RE++KILP QTLSTRA KNV
Sbjct: 309 FSRHAERNTGKYPDVALALSRFKKPAVKSFILDCEVVAFNREEKKILPLQTLSTRAHKNV 368
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
++SDIKV V ++AFDILY NGQ L+QE L +RRE LYDSFEE+PG+FQFAT LTS D+ E
Sbjct: 369 NVSDIKVGVYVFAFDILYLNGQLLIQENLNIRREKLYDSFEEDPGYFQFATALTSNDIGE 428
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFH 658
+Q+FL A++D CEGL+IK++ +ATYEP+K SIGDS+DLVPIAAFH
Sbjct: 429 LQEFLKASIDIGCEGLMIKSLYSNATYEPAK--------------SIGDSVDLVPIAAFH 474
Query: 659 GRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF 718
GRGKRTG +GAFLLACYD + EEFQSICKIGTGFS+A L+E SSSL SKVI P+ YY+
Sbjct: 475 GRGKRTGFFGAFLLACYDVDKEEFQSICKIGTGFSDAELQELSSSLFSKVIAIPKQYYQV 534
Query: 719 ADTISPDVWFEPTERPETSNSPASI 743
D ++PDVW EPTE E + +I
Sbjct: 535 DDGLNPDVWLEPTEVWEVKAADLTI 559
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 135/175 (77%), Gaps = 5/175 (2%)
Query: 136 ESQPTPPSPKKRKVNVN-SVSAK---EKIAELKSNIVLLKKKAGEFDPKMVACWEKGERV 191
E PS + K V S SAK +++ ELKS I LLKKK +FDP V+CW+KGERV
Sbjct: 28 EETADAPSSRVNKTLVGISDSAKPKSDRVTELKSKIGLLKKKPADFDPSKVSCWDKGERV 87
Query: 192 PFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLEL 251
PF+FLSL FD+I+ E+GRI+ITDI+CNMLRT + TT +DL+ VYLAAN+IAPAHEG++L
Sbjct: 88 PFMFLSLAFDLIALESGRIVITDILCNMLRTAIATTQDDLLSTVYLAANEIAPAHEGVKL 147
Query: 252 GIG-DASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTI 305
GIG +SIIKA++EA GRT++ VK+QY ++GDLGLVAK SRSSQ+++ PLT+
Sbjct: 148 GIGKGSSIIKAISEAFGRTKAQVKQQYTQLGDLGLVAKGSRSSQTVIFMHKPLTV 202
>gi|353240611|emb|CCA72472.1| probable CDC9-DNA ligase I [Piriformospora indica DSM 11827]
Length = 826
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 280/670 (41%), Positives = 416/670 (62%), Gaps = 27/670 (4%)
Query: 82 SSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDNPIDSEKESQPTP 141
+ +S K+ T ++ P+T + V K+ + + S+ ++ +DN + +E S
Sbjct: 83 TKASTSKKSTAKSKIPETKSKKVKAKLPKAPKSVSSRASSVPASDVDNSVINEASSPVAD 142
Query: 142 PSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFD 201
P + +++ ++E K+ LLK +F W +GE P+ ++ F
Sbjct: 143 VDPGEEELS--DAHSEEAAVASKAAEQLLK---NQFTVDFKGAWPEGEPAPYALITQAFS 197
Query: 202 MISNETGRILITDIVCNMLRTVM---------ETTPEDLVPVVYLAANKIAPAHEGLELG 252
+I T RI T + ++L TV+ E + ++ VYL N+++P + G+ELG
Sbjct: 198 LIEGTTKRIEKTSYLTSLLFTVISRSRQKDGREPDIDSVLQTVYLCINRLSPDYIGIELG 257
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTF 312
IG++ +IKA++E+ GR+ +K + ++ GDLGLVA S++SQ + KP PLT+ VF
Sbjct: 258 IGESLLIKAISESTGRSAQVIKTELKKEGDLGLVAMNSKASQKTIFKPKPLTVPTVFARL 317
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVA-------ATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
+ IA +G SQ KK I LL A +T E +++IR L+ KLRIGLAE+T++
Sbjct: 318 KEIALTSGVQSQAKKTGIITKLLAACQTTIAGSTSSEAKFIIRSLEGKLRIGLAERTVIV 377
Query: 366 ALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLS 421
AL AAV +E+ + + S LEEA I+KQV+S +P Y+ ++PALL G+W+L
Sbjct: 378 ALAHAAVLDEKERRNKNWSKERLSSKLEEATGILKQVYSEIPSYDLVIPALLKYGIWDLR 437
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
C TPGIP+ PMLAKPTK + E++++F+ +FTCEYKYDGERAQ+H LEDG+V ++SR
Sbjct: 438 AHCKLTPGIPLKPMLAKPTKAIGEVLDRFEGKKFTCEYKYDGERAQVHRLEDGTVAVFSR 497
Query: 482 NAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLS 541
N+E + K+PD++ ++ R K + +SFV D E VA D+ K++PFQ LS R RK+V +
Sbjct: 498 NSEDMSKKYPDLMESLPRCIKDNTKSFVFDAEAVAIDKNTGKLMPFQELSKRKRKDVKVE 557
Query: 542 DIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
DI V VC++AFD+LY NG+PLL + L RR L + F P F FA + ++IQ
Sbjct: 558 DIAVRVCLFAFDLLYLNGEPLLHKSLEERRALLREHFVPVPLEFDFAKSSDGDTTEQIQT 617
Query: 602 FLDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
FL+ +V CEGL++K + D + YEPS+RS+NWLKLKKDY+ +GDSLDLV + +HG+
Sbjct: 618 FLEESVKDGCEGLMVKMLQSDESFYEPSRRSVNWLKLKKDYLAGVGDSLDLVVVGGYHGK 677
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD 720
GKRT VYGAFLLACYD++NEE+Q+ICKIGTGFS+ L+E + +L+ I R + A
Sbjct: 678 GKRTAVYGAFLLACYDADNEEWQTICKIGTGFSDEALQEHAKTLKELEISALRGDIK-AG 736
Query: 721 TISPDVWFEP 730
PDVWFEP
Sbjct: 737 GAKPDVWFEP 746
>gi|256074244|ref|XP_002573436.1| DNA ligase I [Schistosoma mansoni]
gi|350645178|emb|CCD60120.1| DNA ligase I, putative [Schistosoma mansoni]
Length = 783
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 272/617 (44%), Positives = 374/617 (60%), Gaps = 47/617 (7%)
Query: 173 KAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV 232
KAG + P W +GE VP++ L+ F+ I +GRI IT+I+CN R+V + DL
Sbjct: 98 KAG-YHPIHDCNWREGESVPYLSLARTFECIEATSGRIKITEILCNFFRSVGLLSSFDLT 156
Query: 233 PVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRS 292
VYL N++ PA+EG+ELG+G+ ++KALA G H++ ++ GDLG VA+ RS
Sbjct: 157 SCVYLCLNRLGPAYEGMELGVGETILLKALAATTGVGIEHMRSSLKQHGDLGAVAETIRS 216
Query: 293 SQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQS 352
Q ++ P PLTI+ VF + IA +G +Q KK I++LLVA + E +Y+IR L
Sbjct: 217 RQKILSAPKPLTISSVFSKLKDIASMSGNSAQNKKMEIIRSLLVACRESETKYIIRSLSG 276
Query: 353 KLRIGLAEQTLLAALGQAA---------------VYNEQHSKPPPNIQSPLEEAAKIVKQ 397
KLRIGLAEQT+L ALGQA + N + + ++ A VK+
Sbjct: 277 KLRIGLAEQTVLTALGQAVAMTPFHFKVSDKSTRIINASNGMSSEQWKVTMDIAVANVKR 336
Query: 398 VFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC 457
+ V P Y +++ ALLT +L C+ TPGIP+ PMLA PT G+ EI+ +F++ +FTC
Sbjct: 337 AYCVCPDYSRLIKALLTKSHESLDQICTITPGIPLKPMLASPTHGIYEILKRFEECDFTC 396
Query: 458 EYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV-------LAVSRLKKPSVR---- 506
EYKYDGERAQIH L G+ +YSRN E NT K+PD+V L S+L ++
Sbjct: 397 EYKYDGERAQIHILPSGASHVYSRNQEDNTTKYPDIVNNLMSRVLPESKLTPHAIELLSE 456
Query: 507 --------------------SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
S ++D E+VA+DR ILPFQ LSTR RK+V S +KV
Sbjct: 457 IVKDNKIQVQSNGIVGNKLESCIIDSEVVAWDRLAGHILPFQVLSTRKRKDVDESTLKVQ 516
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
+CIY FDIL+ NG L+++ LR+RRE L + F G F AT+L S D DEI FLD A
Sbjct: 517 ICIYVFDILFINGISLIEQPLRIRREILREVFPRISGEFMMATSLDSSDTDEIATFLDEA 576
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
+ +CEGL+IKT+DR++TYE +KRS +WLKLKKDY+E +GD+LDLV I F+G GKR G
Sbjct: 577 IKGNCEGLMIKTLDRNSTYEIAKRSHSWLKLKKDYLEGVGDTLDLVVIGGFYGTGKRAGR 636
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
YG +LLACYD + EE+Q+ICKIGTG + L S ++ K +PYY++ ++ PD
Sbjct: 637 YGGYLLACYDPDTEEYQTICKIGTGMKDDELASFSEFFKNHATDKAKPYYQYTISLIPDQ 696
Query: 727 WFEPTERPETSNSPASI 743
WFEP + E + SI
Sbjct: 697 WFEPVQVWEVKAADLSI 713
>gi|167521445|ref|XP_001745061.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776675|gb|EDQ90294.1| predicted protein [Monosiga brevicollis MX1]
Length = 657
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 270/594 (45%), Positives = 382/594 (64%), Gaps = 27/594 (4%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW + P+ L+ ++ + T R+ I +V N R+V+ +P+DLV VY
Sbjct: 1 YHPIAHACWVHDQPTPYQALAAMYMAVDKTTKRLEIIAMVANFFRSVLLLSPKDLVRCVY 60
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS- 295
L N +APA+EGLELGIGD+ +++A+A+A GR+ VK + GDLG A + Q
Sbjct: 61 LCTNDLAPAYEGLELGIGDSILVRAIADASGRSPGQVKAVMHQCGDLGKCAVKCKGKQGK 120
Query: 296 --MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-TDCEPQYLIRLLQS 352
+R+ PLT+ +VF+ F IA+ +G+D Q++K++ IK LLV A + E +LIR L
Sbjct: 121 LGFVRQQPPLTVAQVFEAFTQIARLSGRDCQKRKQDVIKQLLVRARCEAETMFLIRSLSG 180
Query: 353 KLRIGLAEQTLLAALGQAAVYNE-QHSKPPPNIQSPLEEA----------AKIV--KQVF 399
+LRIGLA+ ++L+ALG A PP I + A A I+ K V+
Sbjct: 181 RLRIGLADSSVLSALGLAITMTPPCQDFPPAEIDASKGRAQSEAFKAKADANILALKTVY 240
Query: 400 SVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
LP Y+ I+P LL DG+ + + C TPGIP+ PMLA PTKG+SE++++F F CEY
Sbjct: 241 CELPNYDYILPILLKDGLAAVVDKCGITPGIPMKPMLAHPTKGISEVMDRFDGKTFACEY 300
Query: 460 KYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR 519
KYDGERAQ+H ++G V I+SRN+E NT K+PD+V + V FVLDCE VAYD
Sbjct: 301 KYDGERAQVHMSKEGRVCIFSRNSEDNTTKYPDIVGRIRDAMSQHVTDFVLDCEAVAYDI 360
Query: 520 EKQKILPFQ----------TLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
+++ILPFQ LSTR RK+ + DIKV VC++AFD+LY NG+ L++E +
Sbjct: 361 VERQILPFQACPCGSSQRLVLSTRKRKDANEEDIKVQVCLFAFDLLYLNGESLVRENFQT 420
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSK 629
RR L ++F+ G F FA +L + D+DEI ++LD ++ SCEGL++KT++ DATYE +K
Sbjct: 421 RRNKLREAFQHVEGQFHFANSLITNDVDEINEYLDLSIKESCEGLMVKTLEVDATYEIAK 480
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS +WLKLKKDY++ +GD+LDLV I A+ G+GKRTG YGAFLLAC+D+ EEFQSICKIG
Sbjct: 481 RSHSWLKLKKDYLDGVGDTLDLVVIGAWIGKGKRTGTYGAFLLACHDTETEEFQSICKIG 540
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
TGFS+ L+ ++SL++ V+P YYR+ + PDVWF P + E + SI
Sbjct: 541 TGFSDEDLKGFATSLKAHVVPTAPSYYRYDAGLKPDVWFAPEQVWEVKAADLSI 594
>gi|225684244|gb|EEH22528.1| DNA ligase [Paracoccidioides brasiliensis Pb03]
Length = 847
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 297/710 (41%), Positives = 417/710 (58%), Gaps = 76/710 (10%)
Query: 66 SAAAKKKPSPQPNSSSSS--SSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPI 123
S KK+ SP+P ++ +S K R+ Q+PK V E + E E S +
Sbjct: 147 STPEKKRASPKPKTADKKPVASKAKGRSKSPQSPKK----VKEPVDETKESTSAE----- 197
Query: 124 SNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVA 183
+ +D+ ++ ++ + TP +K + V V LK + P
Sbjct: 198 KDDVDS-VNDDEIGEETPEVAQKDRETVQQV---------------LKSSGKDPSPD--- 238
Query: 184 CWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIA 243
W+ G+ VP+ L F +I T R++I LR V+ TP DL+P V L NK+A
Sbjct: 239 -WKVGDPVPYAALCTTFSLIEMTTKRLVILSHCSLFLRQVLRLTPNDLLPTVQLMLNKLA 297
Query: 244 PAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPL 303
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PL
Sbjct: 298 ADYAGIELGIGESLIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPL 357
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQ 344
T+ V + IAK G SQ+KK + IK LL +A E +
Sbjct: 358 TVRGVHEGLLAIAKTQGHGSQDKKISAIKKLLSSADAAVAGKGSKGIDITHNKGGPSEAK 417
Query: 345 YLIRLLQSKLRIGLAEQTLLAALGQAAVYNE---QHSKPPPNIQSPLEEAAKIVKQVFSV 401
++IR L+ KLR+GLAE+T+L AL A V +E Q K P Q L + +I+K V+S
Sbjct: 418 FIIRFLEGKLRLGLAERTVLVALAHAMVAHEVELQGKKAPTTEQ--LAKGEEILKSVYSE 475
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
LP YE I+PA+L G++NL + C PG+P+ PMLAKPTK ++E++++F+ FTCEYKY
Sbjct: 476 LPSYEVIIPAMLEHGIFNLKDKCKLQPGVPLKPMLAKPTKSITEVLDRFEGKNFTCEYKY 535
Query: 462 DGERAQIHYLE------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKP 503
DGERAQIHY+ G I+SRN+E + K+PD++ + K
Sbjct: 536 DGERAQIHYISREAISEYRATASTLQKDGGGVCAIFSRNSEDLSKKYPDILSKLENWVKK 595
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLL 563
SFVLDCE VA+D +K+LPFQ L TR RK+V D+KV VC++AFD+L+ NG+P +
Sbjct: 596 GTTSFVLDCETVAWDVVGKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTV 655
Query: 564 QEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RD 622
++ LR RR L+++F G F FA + DL+EIQ LD +V ASCEGL++K +D +
Sbjct: 656 KKTLRERRSLLHEAFVPVEGEFVFAQHGDTSDLEEIQTLLDESVKASCEGLMVKMLDTEE 715
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+ YEPSKRS NWLK+KKDY+ IGDSLDLV + A++GRGKRT VYGAFLLA Y+ + +
Sbjct: 716 SGYEPSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYYGRGKRTSVYGAFLLAAYNPTTQNY 775
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
++IC IGTGFSEA+LEE S+L VI +P+P+Y + PDVWFEP
Sbjct: 776 ETICNIGTGFSEALLEELHSALSPLVIDRPKPFYDHSSVPKDQPDVWFEP 825
>gi|156847073|ref|XP_001646422.1| hypothetical protein Kpol_2001p71 [Vanderwaltozyma polyspora DSM
70294]
gi|156117098|gb|EDO18564.1| hypothetical protein Kpol_2001p71 [Vanderwaltozyma polyspora DSM
70294]
Length = 726
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 261/546 (47%), Positives = 374/546 (68%), Gaps = 7/546 (1%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE-GL 249
VP+ L VF + + + R+ I I + L VM+ P++LVP+ YL NK+ P +E GL
Sbjct: 117 VPYADLCEVFQEVESTSSRLSIIKICSDFLIKVMKQDPQNLVPITYLFINKLGPDYEPGL 176
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G+ ++K ++E+CG++ +K QY+E+GDLG +A+ +R+ Q M KP PLT+ +VF
Sbjct: 177 ELGLGEGLLMKTISESCGKSMQQLKNQYREIGDLGQIAQDARNVQPTMFKPKPLTVGEVF 236
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
+ IA+ GKDSQ++K IK +L A E ++LIR L+SKLRIGLAE+T+L +L +
Sbjct: 237 QNLKDIAQSQGKDSQQRKMRLIKRMLTACKGVEAKFLIRSLESKLRIGLAEKTVLISLSK 296
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + NE + P+++ +E A + ++ F +P YE I+ + L DG+ L N C PG
Sbjct: 297 ALLLNEYETSKDPSME-LIETAEEKIRDAFCQVPNYEIIIQSCLNDGIMELDNNCKLRPG 355
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PMLAKPTK ++E+++ FQ EFTCEYKYDGER Q+H L +G + IYSRN E T +
Sbjct: 356 IPLKPMLAKPTKAINEVLDAFQGEEFTCEYKYDGERGQVHLLSNGEMRIYSRNGENMTER 415
Query: 490 FPDVVLAVSRLKKPSVR----SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV 545
+P++ + +K S S +LDCE+VA+D E+ KILPFQ LSTR RK V L D+KV
Sbjct: 416 YPELHIEDFLVKDESNTDKEVSLILDCEVVAWDNEQNKILPFQVLSTRKRKGVELKDVKV 475
Query: 546 DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDA 605
VC++AFDILY NG+ L+ + LR RR+ L++ + PG FQ+AT+L + +LDEIQKFLD
Sbjct: 476 RVCLFAFDILYYNGEGLITKTLRERRKILHEVTKCVPGEFQYATSLITAELDEIQKFLDQ 535
Query: 606 AVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A+ SCEGL++K +D ++ YEPSKRS NWLKLKKDY+ +GDSLDL + A++G+GKRT
Sbjct: 536 AIKDSCEGLMVKILDGEESRYEPSKRSRNWLKLKKDYLAGVGDSLDLCVMGAYYGKGKRT 595
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
G YG FLL CY+ ++ E+++ CKIGTGFS+ ML + R + I P+ +Y F + P
Sbjct: 596 GTYGGFLLGCYNQDSGEYETCCKIGTGFSDEMLTKLYELFREEEIEVPKSFYNFDSSAEP 655
Query: 725 DVWFEP 730
D+WFEP
Sbjct: 656 DIWFEP 661
>gi|406864570|gb|EKD17615.1| putative DNA ligase (Polydeoxyribonucleotide synthase) [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 918
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 260/585 (44%), Positives = 382/585 (65%), Gaps = 39/585 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F +I + R++I LR V+ TP+D++P V L NK+A
Sbjct: 252 WKPGEPVPYAALCTTFSLIEMTSKRLVIAAHCSLFLRQVLRLTPDDMLPTVLLMINKLAA 311
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ GR + +K+ +E+GDLGLVA SR++Q +M KP PLT
Sbjct: 312 DYAGIELGIGESLIMKAIGSTTGRNLAQIKQDQREIGDLGLVAVKSRANQPVMFKPRPLT 371
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEP---------------QYLIRL 349
I V +A +G +Q +K + I LL AA +P ++++R
Sbjct: 372 IRAVHKGLMDVATTSGNGAQGRKVDLIGKLLAAADVAKPGKVDITKDKGGPSEAKFIVRF 431
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP--LEEAAKIVKQVFSVLPVYEK 407
L+ KLR+GLAE+T+L +L QA V +E +K + + L + I+K V S LP Y+
Sbjct: 432 LEGKLRLGLAEKTVLVSLAQAMVCHETEAKGSGKVPTTEQLAKGEAILKAVHSELPSYDV 491
Query: 408 IVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQ 467
I+PA+L G++NL + C PG+P+ PMLAKPTK ++E++++F++ FTCEYKYDGERAQ
Sbjct: 492 IIPAMLEHGIFNLRDNCKLQPGVPLKPMLAKPTKAITEVLDRFENQTFTCEYKYDGERAQ 551
Query: 468 IHYLED-------GSVE------------IYSRNAERNTGKFPDVVLAVSRLKKPSVRSF 508
IHY+ GS E I+SRN+E + K+PD++ ++ KP +SF
Sbjct: 552 IHYVAKDSAQQYRGSAESATKTAHGGLAAIFSRNSEDLSKKYPDILAKLNTWVKPDTKSF 611
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
V+DCE VA+D E++K+LPFQ L TR +K+V + D+KV VC++AFD+L+ NG+ ++ + LR
Sbjct: 612 VMDCETVAWDLEEKKVLPFQQLMTRKKKDVKIEDVKVKVCVFAFDLLFLNGEAVVGKSLR 671
Query: 569 VRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEP 627
RRE L++SF G F FAT++ +++EIQ FLD ++ ASCEGL++K +D ++ YEP
Sbjct: 672 ERRELLHESFTPVEGEFSFATSMNGQEIEEIQIFLDESMKASCEGLMVKMLDGAESGYEP 731
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
SKRS NWLK+KKDY+ +GDSLDLV + A+HG+GKRT VYGAFLLA Y+S ++ +++IC
Sbjct: 732 SKRSRNWLKIKKDYLSGVGDSLDLVVLGAYHGKGKRTSVYGAFLLASYNSTSDTYETICN 791
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
IGTGFSEA+LE + L +I +P+P+Y +T PDVWFEP
Sbjct: 792 IGTGFSEAVLETLHAELSPLIIDRPKPFYSHSAGNTHQPDVWFEP 836
>gi|328719935|ref|XP_001943404.2| PREDICTED: DNA ligase 1-like [Acyrthosiphon pisum]
Length = 843
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/568 (44%), Positives = 372/568 (65%), Gaps = 12/568 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P A W + P+ L+ I + R+ I +I+ N R+V+ +P+DL+P VY
Sbjct: 199 YHPIRDAFWNHNQPTPYSALTKTLLCIEEVSARLKIIEILSNYFRSVIVVSPKDLLPSVY 258
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L NK+ P + GLELGI + +++KA+ + GR+ + VK +++GDLG+VA+ S+S+Q
Sbjct: 259 LCLNKVCPDYIGLELGIAETTLLKAIVQTTGRSMAQVKSDVKKIGDLGIVAEKSKSNQKT 318
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M KP LT+ VFD + I++ G KK ++I+++ +A D E ++L+R L KLRI
Sbjct: 319 MFKPARLTVKSVFDKLKDISEMTGHAVTVKKLDKIQSMFIACQDSEARFLMRSLAGKLRI 378
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAK------------IVKQVFSVLPV 404
GLAEQ++L ALG A PP I + ++ ++ I+K + P
Sbjct: 379 GLAEQSVLQALGLACTMTPPPQDFPPEILNAAKKMSEEKFKKTYDGNTLIIKTTYCESPN 438
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
+ I+P +L GV L C TPGIP+ PMLA PTKGV E++++F ++FTCE+KYDGE
Sbjct: 439 LDIIIPIILEVGVSALPENCKLTPGIPLKPMLAHPTKGVHEVLSRFDGLKFTCEWKYDGE 498
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH EDG++ IYSRN E NT K+PD++ + +K P+V+SFV+D E VA+DRE +KI
Sbjct: 499 RAQIHLTEDGNICIYSRNQENNTSKYPDIINRLDSVKGPNVKSFVMDSEAVAWDRENKKI 558
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
+PFQ LSTR RKN + +DIKV VC+Y FD+LY NG+ L++ RR+ L ++F E
Sbjct: 559 MPFQILSTRKRKNANEADIKVQVCVYMFDLLYLNGESLVKRPFCERRQLLRENFIEVEEQ 618
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F AT+L + ++E+Q FL+ ++ +CEGL++KT++ +ATYE +KRS NWLKLKKDY++
Sbjct: 619 FLLATSLDTTKMEEVQDFLEESIKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDG 678
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD++D+V + + GRGKRTG YG FLLACYD ++EE+QSICKIGTGFS+ L+ +
Sbjct: 679 VGDTIDVVVLGGYLGRGKRTGTYGGFLLACYDPDSEEYQSICKIGTGFSDEDLQTHTEFF 738
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTE 732
+ +I P+ YYRF + PD WFE +
Sbjct: 739 QQHIIDGPKSYYRFDQSHEPDHWFETVQ 766
>gi|393906949|gb|EFO21610.2| DNA ligase [Loa loa]
Length = 665
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/563 (46%), Positives = 367/563 (65%), Gaps = 5/563 (0%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE++P++ L+ F+ I + R+ I I+ N V+E TP +L VYL NK+ P
Sbjct: 35 WKSGEKIPYLCLAKTFEDIEATSSRLEIIKILANFFGKVIERTPNELAICVYLCVNKLGP 94
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+EG+ELGI + +++KA+A+A GR +++ + GDLGLVA+ SRS+Q ++ P PLT
Sbjct: 95 TYEGMELGIAEGALMKAIAQATGRKIDKLREDLNQKGDLGLVAQMSRSNQRILFTPAPLT 154
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+T VF + +AK +G + KK + IK+LLV+ DCE +YLIR L KLRIGLAEQ++L
Sbjct: 155 VTSVFHKLQDMAKTSGHMAMNKKVDMIKSLLVSCRDCEARYLIRSLSGKLRIGLAEQSIL 214
Query: 365 AALGQAAV-YNEQHSKPPPNIQSPLEEAAK---IVKQVFSVLPVYEKIVPALLTDGVWNL 420
AL A + + S N + E A+ ++K +S P YEK++ A+L+DG+ L
Sbjct: 215 VALANAFTNFEAKKSGEKLNCEKMKERQAEDILLLKSTYSECPDYEKVIEAVLSDGLSKL 274
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
C TPGIP+ PMLA PTKG+ E++ +F D F CE+KYDGERAQIHY G ++I+S
Sbjct: 275 PEKCKITPGIPVKPMLAHPTKGIDEVLKRFGDSVFACEFKYDGERAQIHYDSSG-IKIFS 333
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
RN E NT K+PDV + ++ SF++D EIVA+D + ILPFQ LSTR RKNV
Sbjct: 334 RNQENNTDKYPDVREQLKQIMDEETTSFIIDSEIVAFDPVHETILPFQILSTRKRKNVGD 393
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
S+IKV V ++ FD+L+ NGQ L + R RRE L F+E G F + + D ++I
Sbjct: 394 SEIKVKVHVFIFDLLFWNGQSLTKSPYRKRREILRQHFKEVGGICGFVASKDTEDTEQIS 453
Query: 601 KFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
+FLD A+ +CEGL+IKT+D DATYE +KRS +WLKLKKDY+++IGD+LDL I AF G
Sbjct: 454 EFLDDAIKGNCEGLMIKTLDCDATYEIAKRSRSWLKLKKDYLDTIGDTLDLTVIGAFFGT 513
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD 720
GKRTGVYG +LLACY+ NEE++SICKIGTG ++ L ++ I K RPYY +
Sbjct: 514 GKRTGVYGGYLLACYNPINEEYESICKIGTGLTDDDLRQQHQYFEELRIEKARPYYSYDS 573
Query: 721 TISPDVWFEPTERPETSNSPASI 743
++ PDVWF+P E + SI
Sbjct: 574 SLKPDVWFDPKIVWEVKAADLSI 596
>gi|258574125|ref|XP_002541244.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Uncinocarpus
reesii 1704]
gi|237901510|gb|EEP75911.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Uncinocarpus
reesii 1704]
Length = 941
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 270/585 (46%), Positives = 374/585 (63%), Gaps = 41/585 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F ++ T R+ I LR V+ TP DL+P + L NK+A
Sbjct: 271 WKAGDPVPYAALCTTFSLVEMTTKRLAILAHCSLFLRQVLRLTPGDLLPTIQLMINKLAA 330
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 331 DYAGIELGIGESLIMKAIGESTGRSLAVIKTDQHEIGDLGLVAAKSRSNQPTMFKPKPLT 390
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
+ V ++ IAK G SQ+KK IK LL +A E +Y++R
Sbjct: 391 VRGVHESLLAIAKVQGHGSQDKKIGGIKKLLSSADAGTAGKIDITKDKGGPSEAKYIVRF 450
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNE---QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYE 406
L+ KLR+GLAE+T+L AL A V +E ++ K P Q L + I+KQV+S LP YE
Sbjct: 451 LEGKLRLGLAERTVLVALAHAMVSHEIEVKNGKAPSTEQ--LAKGEAILKQVYSELPSYE 508
Query: 407 KIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
I+PA+L G++N+ + C PG+P+ PMLAKPTK +SE++++F+ +FTCEYKYDGERA
Sbjct: 509 VIIPAMLEHGLFNVQDKCKLQPGVPLKPMLAKPTKSISEVLDRFEGKDFTCEYKYDGERA 568
Query: 467 QIHYLEDGSVE------------------IYSRNAERNTGKFPDVVLAVSRLKKPSVRSF 508
QIHY+ S++ I+SRN+E + K+PDV+ + KP +SF
Sbjct: 569 QIHYVSRDSIKDYAATAGTLQKDGQGLCAIFSRNSEDLSKKYPDVLDKLESWVKPGTKSF 628
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
V+DCE VA+D E +K+LPFQ L TR RK+V DIKV VC++AFDIL+ NG+P ++ LR
Sbjct: 629 VVDCETVAWDLENKKVLPFQQLMTRKRKDVKAEDIKVRVCVFAFDILFLNGEPTVKMTLR 688
Query: 569 VRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDAT-YEP 627
RR L+++F G F FA + +++EIQ LD +V +SCEGL++K +D D + YEP
Sbjct: 689 ERRSLLHETFIPTEGEFAFAQYGNTSNVEEIQNLLDESVKSSCEGLMVKMLDTDESGYEP 748
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
SKRS NWLK+KKDY+ IGDSLDLV I A+ G+GKRT VYGAFLLA Y+ N E +++IC
Sbjct: 749 SKRSRNWLKVKKDYLAGIGDSLDLVVIGAYFGKGKRTSVYGAFLLAAYNPNTENYETICN 808
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
IGTGFSE++LEE +L I +P+P+Y + PDVWFEP
Sbjct: 809 IGTGFSESLLEELHKTLSPLSISQPKPFYSHSSVPKDQPDVWFEP 853
>gi|303312547|ref|XP_003066285.1| ATP-dependent DNA ligase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240105947|gb|EER24140.1| ATP-dependent DNA ligase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320033623|gb|EFW15570.1| DNA ligase [Coccidioides posadasii str. Silveira]
Length = 969
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 272/589 (46%), Positives = 372/589 (63%), Gaps = 45/589 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F ++ T R+ I LR V+ TPEDL+P V L NK+A
Sbjct: 298 WKAGDPVPYAALCTTFSLVEMTTKRLAILAHCSLFLRQVLRLTPEDLLPTVQLMINKLAA 357
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 358 DYAGIELGIGESLIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLT 417
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQY 345
+ V ++ IAK G SQEKK IK LL +A E +Y
Sbjct: 418 VRGVHESLLAIAKMQGHGSQEKKVGGIKKLLSSADSATAGKGSKGIDITKNKGGPSEAKY 477
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAK---IVKQVFSVL 402
++R L+ KLR+GLA++T+L AL A V +E SK N E+ AK I+KQV+S L
Sbjct: 478 IVRFLEGKLRLGLADKTVLVALAHAMVAHETLSKG--NKTPSAEQLAKGEAILKQVYSEL 535
Query: 403 PVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYD 462
P YE I+PA+L G++NL C PG+P+ PMLAKPTK +SE++++F+ +FTCEYKYD
Sbjct: 536 PSYEVIIPAMLEHGIFNLQENCKLQPGVPLKPMLAKPTKSISEVLDRFEGKDFTCEYKYD 595
Query: 463 GERAQIHYLEDGSVE------------------IYSRNAERNTGKFPDVVLAVSRLKKPS 504
GERAQIHY+ +++ I+SRN+E + K+PDV+ + +P
Sbjct: 596 GERAQIHYVSQDAIKDYTATAGTLQKDGKGLCAIFSRNSEDLSKKYPDVLDKLESWVRPG 655
Query: 505 VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQ 564
+SFVLDCE VA+D E +K+LPFQ L TR RK+V DIKV VCI+AFDIL+ NG P ++
Sbjct: 656 TKSFVLDCETVAWDLENKKVLPFQQLMTRKRKDVKAEDIKVRVCIFAFDILFLNGAPTVK 715
Query: 565 EQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDA 623
R RR L+++F G F FA + +++EIQ LD +V +SCEGL++K +D ++
Sbjct: 716 MTFRERRALLHETFVPTEGEFAFAQYGNTSNVEEIQTLLDESVKSSCEGLMVKMLDTEES 775
Query: 624 TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
YEPSKRS NWLK+KKDY+ IGDSLDLV I A+ G+GKRT VYGAFLLA Y+ + E ++
Sbjct: 776 GYEPSKRSRNWLKVKKDYLAGIGDSLDLVVIGAYFGKGKRTSVYGAFLLAAYNPSTENYE 835
Query: 684 SICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
+IC IGTGFS+A+L+E SL I +P+P+Y + PDVWFEP
Sbjct: 836 TICNIGTGFSDALLDELHKSLSPLAISQPKPFYSHSSVPKDQPDVWFEP 884
>gi|358398200|gb|EHK47558.1| hypothetical protein TRIATDRAFT_133844 [Trichoderma atroviride IMI
206040]
Length = 873
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/583 (45%), Positives = 370/583 (63%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G VP+ L F +I T R++I + LR VM TP+DL+P V L NK+AP
Sbjct: 209 WQPGTPVPYAALCKTFSLIELTTKRLIIMEYCSKFLRQVMRLTPDDLLPTVLLMINKLAP 268
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ +K +E+GDLGLVA SRS+Q M KP LT
Sbjct: 269 DYAGIELGIGESLIMKAIGETTGRSLQVIKADQKEIGDLGLVAVKSRSTQPTMFKPKALT 328
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
+ V IA G +Q +K + IK LL ++ E +Y+IR
Sbjct: 329 VRGVHQGLMSIATVTGNGAQGRKVDGIKKLLSSSDSHLKEKVDINKDKGGPSEAKYIIRF 388
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
L+ KLR+GLA++T+L +L QA V +E K S LE I+K V+S LP Y+ I+
Sbjct: 389 LEGKLRLGLADRTVLVSLAQAVVAHEAEVKGKIPTTSDLENGESILKTVYSELPSYDVII 448
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PA++ G+ NL + C PG+P+ PMLAKPTK ++E++++F+ +FTCEYKYDGERAQIH
Sbjct: 449 PAMMEHGIANLRDHCKLRPGVPLKPMLAKPTKAITEVLDRFEGQKFTCEYKYDGERAQIH 508
Query: 470 Y-------------------LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
Y +E G I+SRN+E + K+PDV+ +S K +SFV+
Sbjct: 509 YVAKDAAQDLDASTQGSTKKIESGVACIFSRNSEDLSKKYPDVLEKLSAWIKEDTKSFVV 568
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D ++K+LPFQ L TR RK+V DIKV VC++AFD+LY NG+ ++++ LR R
Sbjct: 569 DCETVAWDVAEKKVLPFQQLMTRKRKDVKAEDIKVKVCVFAFDLLYLNGEAVVEKSLRER 628
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSK 629
RE L +F G FQ AT + +LDEIQ FLD +V ASCEGL++K +D ++ YEPSK
Sbjct: 629 RELLSTAFVPTEGEFQLATHMNGQELDEIQTFLDESVKASCEGLMVKMLDGTESGYEPSK 688
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ +GDSLDLV + A++G+GKRT VYGAFLLACY+ + + ++++C IG
Sbjct: 689 RSRNWLKVKKDYLSGVGDSLDLVVLGAYYGKGKRTSVYGAFLLACYNPSTDVYETVCNIG 748
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRFA--DTISPDVWFEP 730
TGFSE +LE+ + L I +P+P+Y + PDVWFEP
Sbjct: 749 TGFSEQVLEDLHAQLSEITIARPKPFYSHSAGGQHQPDVWFEP 791
>gi|448112033|ref|XP_004201992.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
gi|359464981|emb|CCE88686.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
Length = 759
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 271/555 (48%), Positives = 370/555 (66%), Gaps = 16/555 (2%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETT-PEDLVPVVYLAANKIAPAHE- 247
++ + L+ +F+ I +E+ R+ IT + N +++T+ PE LV VVYL N++ P +E
Sbjct: 145 KLYYTELADLFEKIEHESSRLTITSYMSNFFLHILKTSKPEKLVKVVYLCINRLGPDYEP 204
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITK 307
LELG+G+ +IKA++E GR+ + +KK Y E+GDLG+VA+ SR Q M KP L +
Sbjct: 205 DLELGLGETILIKAVSECYGRSSAKIKKDYHEVGDLGIVAQKSRIGQPTMFKPAKLDVDS 264
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVA--ATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
VFD+ IAK GKDSQ KK + I +L A + E ++++R L+ KLRIGLAE+T+L
Sbjct: 265 VFDSLTKIAKATGKDSQAKKISLINKMLTACDSKTNEAKFIVRSLEGKLRIGLAEKTVLI 324
Query: 366 ALGQAAVYNEQHSKPPPNIQSP-LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
AL QA + K P + + L +A ++++ FS +P YE I+ G+ NL C
Sbjct: 325 ALAQAFI---NWDKSIPKVTTEILAKAEDVIREAFSQIPNYEIIIMKAYEFGILNLLEHC 381
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
TPGIP+ PMLAKPTK V+E++++FQ+ EFTCEYKYDGERAQ+H L G V IYSRN+E
Sbjct: 382 HLTPGIPLKPMLAKPTKSVTEVMDRFQNEEFTCEYKYDGERAQVHVLSSGEVRIYSRNSE 441
Query: 485 RNTGKFPDVVLAVSRLKK----PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
+ ++PD+V + K + S +LDCE VA+DRE+ KILPFQ LSTR RK+V
Sbjct: 442 DMSQRYPDLVSITKDILKLQDGSQISSLILDCEAVAWDREQNKILPFQVLSTRKRKDVEE 501
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
DIKV +C++AFDILY N PL+ + L RR+ LYD+F G FQFAT S DLDEIQ
Sbjct: 502 KDIKVHICLFAFDILYYNDAPLITKSLTERRQVLYDNFNSITGKFQFATHKDSNDLDEIQ 561
Query: 601 KFLDAAVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
+FLD +V SCEGL+IK ++ D+ YEPSKRS NWLKLKKDY+ +GDSLDLV I A+ G
Sbjct: 562 QFLDQSVKDSCEGLMIKMLNGVDSYYEPSKRSRNWLKLKKDYLSGVGDSLDLVVIGAYIG 621
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFA 719
+GKRTG YG FLLA Y+++ E+++ CKIGTGFS+ L + L+ I P+PYY +
Sbjct: 622 KGKRTGTYGGFLLASYNTDTGEYETTCKIGTGFSDEDLASLHAKLKPTEIDTPKPYYVYD 681
Query: 720 DTIS---PDVWFEPT 731
+ S PDVW EPT
Sbjct: 682 TSNSNAQPDVWLEPT 696
>gi|119192832|ref|XP_001247022.1| hypothetical protein CIMG_00793 [Coccidioides immitis RS]
Length = 914
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 272/589 (46%), Positives = 372/589 (63%), Gaps = 45/589 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F ++ T R+ I LR V+ TPEDL+P V L NK+A
Sbjct: 243 WKAGDPVPYAALCTTFSLVEMTTKRLAILAHCSLFLRQVLRLTPEDLLPTVQLMINKLAA 302
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 303 DYAGIELGIGESLIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLT 362
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQY 345
+ V ++ IAK G SQEKK IK LL +A E +Y
Sbjct: 363 VRGVHESLLAIAKMQGHGSQEKKVGGIKKLLSSADSATAGKGSKGIDITKNKGGPSEAKY 422
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAK---IVKQVFSVL 402
++R L+ KLR+GLA++T+L AL A V +E SK N E+ AK I+KQV+S L
Sbjct: 423 IVRFLEGKLRLGLADKTVLVALAHAMVAHETLSKG--NKTPSAEQLAKGEAILKQVYSEL 480
Query: 403 PVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYD 462
P YE I+PA+L G++NL C PG+P+ PMLAKPTK +SE++++F+ +FTCEYKYD
Sbjct: 481 PSYEVIIPAMLEHGIFNLQENCKLQPGVPLKPMLAKPTKSISEVLDRFEGKDFTCEYKYD 540
Query: 463 GERAQIHYLEDGSVE------------------IYSRNAERNTGKFPDVVLAVSRLKKPS 504
GERAQIHY+ +++ I+SRN+E + K+PDV+ + +P
Sbjct: 541 GERAQIHYVSQDAIKDYTATAGTLQKDGKGLCAIFSRNSEDLSKKYPDVLDKLESWVQPG 600
Query: 505 VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQ 564
+SFVLDCE VA+D E +K+LPFQ L TR RK+V DIKV VCI+AFDIL+ NG P ++
Sbjct: 601 TKSFVLDCETVAWDLENKKVLPFQQLMTRKRKDVKAEDIKVRVCIFAFDILFLNGAPTVK 660
Query: 565 EQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDA 623
R RR L+++F G F FA + +++EIQ LD +V +SCEGL++K +D ++
Sbjct: 661 MTFRERRALLHETFVPTEGEFAFAQYGNTSNVEEIQTLLDESVKSSCEGLMVKMLDTEES 720
Query: 624 TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
YEPSKRS NWLK+KKDY+ IGDSLDLV I A+ G+GKRT VYGAFLLA Y+ + E ++
Sbjct: 721 GYEPSKRSRNWLKVKKDYLAGIGDSLDLVVIGAYFGKGKRTSVYGAFLLAAYNPSTENYE 780
Query: 684 SICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
+IC IGTGFS+A+L+E SL I +P+P+Y + PDVWFEP
Sbjct: 781 TICNIGTGFSDALLDELHKSLSPLAISQPKPFYSHSSVPKDQPDVWFEP 829
>gi|327353118|gb|EGE81975.1| DNA ligase [Ajellomyces dermatitidis ATCC 18188]
Length = 1004
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 281/617 (45%), Positives = 379/617 (61%), Gaps = 47/617 (7%)
Query: 157 KEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIV 216
K KIA+ K +V K DP W+ G VP+ L F +I T R++I
Sbjct: 302 KPKIAQKKREMVQHALKDSGKDP--YPDWKPGAPVPYAALCTTFSLIEMTTKRLIILSHC 359
Query: 217 CNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQ 276
LR V+ TP DL+P V L NK+A + G+ELGIG++ I+KA+ E+ GR+ + +K
Sbjct: 360 SLFLRQVLRLTPNDLLPTVQLMLNKLAADYAGIELGIGESFIMKAIGESTGRSLAVIKAD 419
Query: 277 YQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLV 336
E+GDLGLVA SRS+Q M KP PLT+ V + IAK G SQEKK + IK LL
Sbjct: 420 QHEIGDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLLAIAKTQGHGSQEKKISAIKKLLS 479
Query: 337 AATDC-------------------EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE-- 375
+A E +++IR L+ KLR+GLAE+T+L AL A V +E
Sbjct: 480 SADAALAGKGPKGIDITHNKGGPSEAKFIIRFLEGKLRLGLAEKTVLVALAHAMVAHEVE 539
Query: 376 -QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
Q K P + L + I+K V+S LP YE I+PA+L G++NL + C PG+P+ P
Sbjct: 540 VQGKKAPSTEE--LAKGEAILKSVYSELPSYEVIIPAMLEHGIFNLKDKCKLQPGVPLKP 597
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLE------------------DGSV 476
MLAKPTK ++E++++F+ FTCEYKYDGERAQIHY+ +G
Sbjct: 598 MLAKPTKSITEVLDRFEGKNFTCEYKYDGERAQIHYVAREEIHKYASTASTLQKDGEGIC 657
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
I+SRN+E + K+PD++ + K SFVLDCE VA+D +K+LPFQ L TR RK
Sbjct: 658 AIFSRNSEDLSKKYPDILGKLESWVKKGTTSFVLDCETVAWDMVNKKVLPFQQLMTRKRK 717
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+V D+KV VC++AFD+L+ NGQ ++ LR RR L+++F G F FA + DL
Sbjct: 718 DVKAEDVKVKVCVFAFDLLFLNGQATVKMTLRERRALLHEAFTPIEGEFVFAQHGDTNDL 777
Query: 597 DEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
DEIQ LD +V ASCEGL++K +D ++ YEPSKRS NWLK+KKDY+ IGDSLDLV +
Sbjct: 778 DEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVVLG 837
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
A++GRGKRT VYGAFLLA Y+ N + F+++C IGTGFSEA+LEE +L VI +P+P+
Sbjct: 838 AYYGRGKRTSVYGAFLLAAYNPNTQNFETVCNIGTGFSEALLEELHKALSPLVIDRPKPF 897
Query: 716 YRFADT--ISPDVWFEP 730
Y + PDVWFEP
Sbjct: 898 YDHSSVPKDQPDVWFEP 914
>gi|392863744|gb|EAS35487.2| DNA ligase I, ATP-dependent (dnl1) [Coccidioides immitis RS]
Length = 969
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/589 (46%), Positives = 372/589 (63%), Gaps = 45/589 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F ++ T R+ I LR V+ TPEDL+P V L NK+A
Sbjct: 298 WKAGDPVPYAALCTTFSLVEMTTKRLAILAHCSLFLRQVLRLTPEDLLPTVQLMINKLAA 357
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 358 DYAGIELGIGESLIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLT 417
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQY 345
+ V ++ IAK G SQEKK IK LL +A E +Y
Sbjct: 418 VRGVHESLLAIAKMQGHGSQEKKVGGIKKLLSSADSATAGKGSKGIDITKNKGGPSEAKY 477
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAK---IVKQVFSVL 402
++R L+ KLR+GLA++T+L AL A V +E SK N E+ AK I+KQV+S L
Sbjct: 478 IVRFLEGKLRLGLADKTVLVALAHAMVAHETLSKG--NKTPSAEQLAKGEAILKQVYSEL 535
Query: 403 PVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYD 462
P YE I+PA+L G++NL C PG+P+ PMLAKPTK +SE++++F+ +FTCEYKYD
Sbjct: 536 PSYEVIIPAMLEHGIFNLQENCKLQPGVPLKPMLAKPTKSISEVLDRFEGKDFTCEYKYD 595
Query: 463 GERAQIHYLEDGSVE------------------IYSRNAERNTGKFPDVVLAVSRLKKPS 504
GERAQIHY+ +++ I+SRN+E + K+PDV+ + +P
Sbjct: 596 GERAQIHYVSQDAIKDYTATAGTLQKDGKGLCAIFSRNSEDLSKKYPDVLDKLESWVQPG 655
Query: 505 VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQ 564
+SFVLDCE VA+D E +K+LPFQ L TR RK+V DIKV VCI+AFDIL+ NG P ++
Sbjct: 656 TKSFVLDCETVAWDLENKKVLPFQQLMTRKRKDVKAEDIKVRVCIFAFDILFLNGAPTVK 715
Query: 565 EQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDA 623
R RR L+++F G F FA + +++EIQ LD +V +SCEGL++K +D ++
Sbjct: 716 MTFRERRALLHETFVPTEGEFAFAQYGNTSNVEEIQTLLDESVKSSCEGLMVKMLDTEES 775
Query: 624 TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
YEPSKRS NWLK+KKDY+ IGDSLDLV I A+ G+GKRT VYGAFLLA Y+ + E ++
Sbjct: 776 GYEPSKRSRNWLKVKKDYLAGIGDSLDLVVIGAYFGKGKRTSVYGAFLLAAYNPSTENYE 835
Query: 684 SICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
+IC IGTGFS+A+L+E SL I +P+P+Y + PDVWFEP
Sbjct: 836 TICNIGTGFSDALLDELHKSLSPLAISQPKPFYSHSSVPKDQPDVWFEP 884
>gi|444320241|ref|XP_004180777.1| hypothetical protein TBLA_0E02050 [Tetrapisispora blattae CBS 6284]
gi|387513820|emb|CCH61258.1| hypothetical protein TBLA_0E02050 [Tetrapisispora blattae CBS 6284]
Length = 720
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 270/545 (49%), Positives = 365/545 (66%), Gaps = 7/545 (1%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ L +F+ I +E+ R+ IT++ ++ P LVPV YL NK+ P + G+E
Sbjct: 115 LPYADLCQLFETIESESSRLTITNLCTAFFSRTLQLDPSLLVPVTYLCINKLGPDYSGVE 174
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM--MRKPDPLTITKV 308
LG+G+ ++KA+ ACG ++ +K QY+++GDLG +A ++R Q M K +PLTITKV
Sbjct: 175 LGLGEGLLLKAIGSACGVSQQQLKLQYRKLGDLGQLAMSTRVLQPTITMFKLEPLTITKV 234
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
FDT IA GKDSQ +K N IK LL + E ++LIR L+SKLRIGLAE+T+L +L
Sbjct: 235 FDTLAKIAASQGKDSQNQKINMIKRLLTSCQGVEAKFLIRSLESKLRIGLAEKTVLTSLA 294
Query: 369 QAAVYNEQHSKPPPNIQSP-LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
+A V H K NIQ A +I+K F +P YE I+ L GV L++ T
Sbjct: 295 RALVI---HEKGNDNIQDDDYSNAEQIIKDSFCQIPNYEIIITTSLQYGVSQLASHIKLT 351
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNT 487
PGIP+ PMLAKPTK +SE+++ FQ+++FT EYKYDGERAQ+H L DGS+ IYSRN E T
Sbjct: 352 PGIPLKPMLAKPTKSISEVLDTFQNIQFTSEYKYDGERAQVHLLPDGSMRIYSRNGEDMT 411
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV 547
++P++ + + + +LDCE VA+D E QKILPFQ LSTR RK+V L DIKV V
Sbjct: 412 QRYPELNIQDYLVDSTTTTQLILDCEAVAWDVELQKILPFQVLSTRKRKSVDLKDIKVRV 471
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
C++AFDIL N L+ LR RR+ L+ + PG FQFAT LT+ +LDE+Q FLD A+
Sbjct: 472 CLFAFDILRHNNDSLINNTLRERRDILHSITKPCPGQFQFATELTTSNLDELQTFLDKAI 531
Query: 608 DASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
SCEGL++K++D D+ YEPSKRS NWLKLKKDY++ +GDSLDL + A++GRGKRTG
Sbjct: 532 KDSCEGLMVKSLDGTDSHYEPSKRSRNWLKLKKDYLQGMGDSLDLCVLGAYYGRGKRTGT 591
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
YG FLLACY+ + EEF++ CKIGTGFS+ ML+ + L+ I PR + F + PDV
Sbjct: 592 YGGFLLACYNQDTEEFETCCKIGTGFSDEMLQTLYNGLKETAIESPRANFVFDSSAEPDV 651
Query: 727 WFEPT 731
WF PT
Sbjct: 652 WFNPT 656
>gi|295669945|ref|XP_002795520.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284605|gb|EEH40171.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 907
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 271/589 (46%), Positives = 372/589 (63%), Gaps = 45/589 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F +I T R++I LR V+ TP DL+P V L NK+A
Sbjct: 235 WKAGEPVPYAALCTTFSLIEMTTKRLVILSHCSLFLRQVLRLTPNDLLPTVQLMLNKLAA 294
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT
Sbjct: 295 DYAGIELGIGESLIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLT 354
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQY 345
+ V + IA+ G SQ+KK + IK LL +A E ++
Sbjct: 355 VRGVHEGLLAIARTQGHGSQDKKISAIKKLLSSADAAVAGKGSKGIDITHNKGGPSEAKF 414
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNE---QHSKPPPNIQSPLEEAAKIVKQVFSVL 402
+IR L+ KLR+GLAE+T+L AL A V +E Q K P Q L + +I+K V+S L
Sbjct: 415 IIRFLEGKLRLGLAERTVLVALAHAMVAHEVELQGKKAPATEQ--LAKGEEILKSVYSEL 472
Query: 403 PVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYD 462
P YE I+PA+L G++NL + C PG+P+ PMLAKPTK ++E++++F+ FTCEYKYD
Sbjct: 473 PSYEVIIPAMLEHGIFNLKDKCKLQPGVPLKPMLAKPTKSITEVLDRFEGKNFTCEYKYD 532
Query: 463 GERAQIHYLE------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPS 504
GERAQIHY+ G I+SRN+E + K+PD++ + K
Sbjct: 533 GERAQIHYISREAISECRATASTLQKDGGGVCAIFSRNSEDLSKKYPDILGKLENWVKKG 592
Query: 505 VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQ 564
+SFVLDCE VA+D +K+LPFQ L TR RK+V D+KV VC++AFD+L+ NG+P ++
Sbjct: 593 TKSFVLDCETVAWDVVGKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTVK 652
Query: 565 EQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDA 623
+ LR RR L+++F G F FA + DL+EIQ LD +V ASCEGL++K +D ++
Sbjct: 653 KTLRERRSLLHEAFVPVEGEFVFAQHGDTNDLEEIQTLLDESVKASCEGLMVKMLDTEES 712
Query: 624 TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
YEPSKRS NWLK+KKDY+ IGDSLDLV + A++GRGKRT VYGAFLLA Y+ + ++
Sbjct: 713 GYEPSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYYGRGKRTSVYGAFLLAAYNPTTQNYE 772
Query: 684 SICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
+IC IGTGFSEA+LEE S+L VI +P+P+Y + PDVWFEP
Sbjct: 773 TICNIGTGFSEALLEELYSALSPLVIDRPKPFYDHSSVPKDQPDVWFEP 821
>gi|340516366|gb|EGR46615.1| DNA ligase [Trichoderma reesei QM6a]
Length = 877
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 265/584 (45%), Positives = 373/584 (63%), Gaps = 39/584 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G VP+ L F +I T R++I + LR VM TP+DL+P V L NK+AP
Sbjct: 213 WKPGTPVPYAALCKTFSLIELTTKRLIIMEHCSRFLRQVMRLTPDDLLPTVLLMINKLAP 272
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ +K +E+GDLGLVA SRS Q M +P LT
Sbjct: 273 DYAGIELGIGESLIMKAIGETTGRSLQVIKADQKEIGDLGLVAVKSRSKQPTMFQPKALT 332
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC----------------EPQYLIR 348
+ V IA +G +Q +K + IK LL +A+D E +Y+IR
Sbjct: 333 VRGVHQGLMNIATVSGNGAQGRKVDGIKKLL-SASDAYLKEKVDITKDKGGPSEAKYIIR 391
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ KLR+GLA++T+L +L QA V +E K + LE I+K V+S LP Y+ I
Sbjct: 392 FLEGKLRLGLADRTVLVSLAQAVVAHEAEQKGKIPSTTDLENGESILKTVYSELPSYDVI 451
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+PA+L G++NL C PG+P+ PMLAKPTK ++E++++F+ FTCEYKYDGERAQI
Sbjct: 452 IPAMLKYGIFNLREHCKLRPGVPLKPMLAKPTKAITEVLDRFEGQTFTCEYKYDGERAQI 511
Query: 469 HYLEDGSVE-------------------IYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
HY+ + E I+SRN+E + K+PD++ + K +SFV
Sbjct: 512 HYVAKDASEDLSAPAAGVAKPAASGVSCIFSRNSEDLSKKYPDILEKLHTWVKEDTKSFV 571
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
LDCE VA+D ++K+LPFQ L TR RK+V DIKV VC++AFD+LY NG+ ++++ LR
Sbjct: 572 LDCETVAWDVTEKKVLPFQQLMTRKRKDVKAEDIKVKVCVFAFDLLYFNGEAVVEKSLRE 631
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPS 628
RRE L+ +F G F FAT + +LDEIQ FLD +V ASCEGL++K +D +++ YEPS
Sbjct: 632 RRELLHTAFTPVEGEFAFATHMNGQELDEIQSFLDESVKASCEGLMVKMLDGKESGYEPS 691
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
KRS NWLK+KKDY+ +GDSLDLV I A++G+GKRT VYGAFLLACY+++ + ++++C I
Sbjct: 692 KRSRNWLKIKKDYLSGVGDSLDLVVIGAYYGKGKRTSVYGAFLLACYNASTDTYETVCNI 751
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD--TISPDVWFEP 730
GTGFSE +LE+ + L I +P+P+Y + PDVWFEP
Sbjct: 752 GTGFSEQVLEDLYAQLSQITISRPKPFYSHSSGGQHQPDVWFEP 795
>gi|326478881|gb|EGE02891.1| DNA ligase [Trichophyton equinum CBS 127.97]
Length = 889
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 273/589 (46%), Positives = 368/589 (62%), Gaps = 45/589 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F I T R++I LR V+ TP+DL+ V L NK+A
Sbjct: 217 WKAGDPVPYAALCTTFSHIEMTTKRLIILSHCALFLRQVLRLTPDDLLSTVQLMINKLAA 276
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP LT
Sbjct: 277 DYAGIELGIGESLIMKAIGESTGRSLAVIKADQNEIGDLGLVAAKSRSNQPTMFKPKALT 336
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-------------------TDCEPQY 345
+ V + IAK G SQEKK IK LL AA E ++
Sbjct: 337 VRGVHEGLLAIAKTHGTGSQEKKIAGIKKLLSAADADKTGKGSKTIDITKNRGGASEAKF 396
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH---SKPPPNIQSPLEEAAKIVKQVFSVL 402
++R L+ KLR+GLAE+T+L AL A V +E KPP Q L + I+K V+S L
Sbjct: 397 IVRFLEGKLRLGLAERTVLVALAHAMVAHEAEMDGGKPPSTDQ--LGKGEDILKTVYSEL 454
Query: 403 PVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYD 462
P YE I+PA+L G++NL + C PG+P+ PMLAKPTK +SE++++F+ FTCEYKYD
Sbjct: 455 PSYEVIIPAMLKHGIFNLPDNCKLQPGVPLKPMLAKPTKSISEVLDRFEGKHFTCEYKYD 514
Query: 463 GERAQIHYLE------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPS 504
GERAQIHY+ +G ++SRN+E + K+PD++ + KP
Sbjct: 515 GERAQIHYISRDTIKEYPAASTTLQKDGEGLCAVFSRNSEDLSKKYPDILEKLEAWVKPG 574
Query: 505 VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQ 564
+SFV+DCE VA+D +K+LPFQ L TR RK+V DIKV VC++AFD+L+ NG+P ++
Sbjct: 575 TQSFVVDCETVAWDTVNKKVLPFQQLMTRKRKDVKSEDIKVKVCVFAFDLLFLNGEPTVK 634
Query: 565 EQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDA 623
+ LR RR L+D+F G F FA + DL+EIQ LD +V ASCEGL++K +D D+
Sbjct: 635 KTLRERRALLHDAFVPVEGEFAFAQHGNTSDLEEIQTMLDESVKASCEGLMVKMLDTEDS 694
Query: 624 TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
YEPSKRS NWLK+KKDY+ IGDSLDLV + A+ GRGKRT VYGAFLLA Y+ + ++
Sbjct: 695 GYEPSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYFGRGKRTSVYGAFLLAAYNPKTQNYE 754
Query: 684 SICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
+IC IGTGFSEA+LEE +L VI KP+P+Y + PDVWFEP
Sbjct: 755 TICNIGTGFSEALLEELHETLSPLVIDKPKPFYSHSTVPKDQPDVWFEP 803
>gi|324506408|gb|ADY42738.1| DNA ligase 1 [Ascaris suum]
Length = 692
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/564 (46%), Positives = 359/564 (63%), Gaps = 6/564 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W GE++P++ L+ F+ I + + R+ I I+ +E TP +L VYL N++ P
Sbjct: 63 WNSGEKIPYLCLARTFEKIEDTSSRLEIIKILSEFFLKAIERTPSELTACVYLCVNQLGP 122
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
A++GLELGI + ++IKA+A+A GR +K+ GDLG+VA+ SR +Q M+ P PLT
Sbjct: 123 AYDGLELGIAEGTLIKAIAQATGRKVDKIKEDLNAKGDLGIVAQHSRCTQRMLFTPAPLT 182
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ VF+ + IAK AG+ S KK + IK LL++ D E +YL+R L KLRIGLAEQ++L
Sbjct: 183 VLNVFNKLKEIAKAAGQSSMTKKTDVIKTLLISCRDVEARYLVRCLGGKLRIGLAEQSVL 242
Query: 365 AALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVP-ALLTDGVWN 419
AL A NE K ++ E ++K + P Y+ I+ AL G+ +
Sbjct: 243 VALANAFTANELSKKGLKLSGEKLKEKQAEDVLMLKTTYCECPNYDLIISTALAEGGLSS 302
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
L C +PGIP+ PMLA PTKG+ E++ +F +F CEYKYDGER QIH+ G V+I+
Sbjct: 303 LHEHCKLSPGIPLKPMLAFPTKGIGEVMKRFGSAQFACEYKYDGERGQIHFGSFG-VKIF 361
Query: 480 SRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVS 539
SR+ E NTGK+PD+ + + FV D EIVA+D ++ ILPFQ LSTR RKN S
Sbjct: 362 SRSQEDNTGKYPDIAARIHECFDDETKCFVADSEIVAWDTVQKSILPFQILSTRKRKNAS 421
Query: 540 LSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEI 599
S+IKV VC++ FD+LY NG+ L++ R RRE L F+E G F FA + + D DEI
Sbjct: 422 DSEIKVKVCVFMFDLLYWNGESLVKYPFRKRREMLRSHFKEVEGCFCFALSKDTEDTDEI 481
Query: 600 QKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
+FLD A+ +CEGL++KT+D DATYE +KRS NWLKLKKDY++S+GD+LDLV I + G
Sbjct: 482 SEFLDEAIKGNCEGLMVKTLDTDATYEIAKRSHNWLKLKKDYLDSVGDTLDLVVIGGYCG 541
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFA 719
GKRTGVYG +LLACYD ++EE+QSICKIGTG + L + S I K RPYY +
Sbjct: 542 TGKRTGVYGGYLLACYDPDSEEYQSICKIGTGLKDDDLSTQFDQFASLRIEKARPYYSYD 601
Query: 720 DTISPDVWFEPTERPETSNSPASI 743
++ PD WFEP+ E + SI
Sbjct: 602 SSLEPDHWFEPSVVWEVKAADLSI 625
>gi|327303420|ref|XP_003236402.1| DNA ligase I [Trichophyton rubrum CBS 118892]
gi|326461744|gb|EGD87197.1| DNA ligase I [Trichophyton rubrum CBS 118892]
Length = 889
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/589 (46%), Positives = 368/589 (62%), Gaps = 45/589 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F I T R++I LR V+ TP+DL+ V L NK+A
Sbjct: 217 WKAGDPVPYAALCTTFSHIEMTTKRLIILSHCALFLRQVLRLTPDDLLSTVQLMINKLAA 276
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP LT
Sbjct: 277 DYAGIELGIGESLIMKAIGESTGRSLAVIKADQNEIGDLGLVAAKSRSNQPTMFKPRALT 336
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-------------------TDCEPQY 345
+ V + IAK G SQEKK IK LL AA E ++
Sbjct: 337 VRGVHEGLLAIAKTHGTGSQEKKIAGIKKLLSAADADKTGKGSKTIDITKNRGGASEAKF 396
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH---SKPPPNIQSPLEEAAKIVKQVFSVL 402
++R L+ KLR+GLAE+T+L AL A V +E KPP Q L + I+K V+S L
Sbjct: 397 IVRFLEGKLRLGLAERTVLVALAHAMVAHEAEMDGGKPPSTDQ--LAKGEDILKTVYSEL 454
Query: 403 PVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYD 462
P YE I+PA+L G++NL + C PG+P+ PMLAKPTK +SE++++F+ FTCEYKYD
Sbjct: 455 PSYEVIIPAMLKHGIFNLPDNCKLQPGVPLKPMLAKPTKSISEVLDRFEGKHFTCEYKYD 514
Query: 463 GERAQIHYLE------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPS 504
GERAQIHY+ +G ++SRN+E + K+PD++ + KP
Sbjct: 515 GERAQIHYISRDTIKEYPAASTTLQKDGEGLCAVFSRNSEDLSKKYPDILEKLEAWVKPG 574
Query: 505 VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQ 564
+SFV+DCE VA+D +K+LPFQ L TR RK+V D+KV VC++AFD+L+ NG+P ++
Sbjct: 575 TQSFVVDCETVAWDTVNKKVLPFQQLMTRKRKDVKSEDVKVKVCVFAFDLLFLNGEPTVK 634
Query: 565 EQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDA 623
+ LR RR L+D+F G F FA + DL+EIQ LD +V ASCEGL++K +D D+
Sbjct: 635 KTLRERRALLHDAFMPVEGEFAFAQHGNTSDLEEIQTMLDESVKASCEGLMVKMLDTEDS 694
Query: 624 TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
YEPSKRS NWLK+KKDY+ IGDSLDLV + A+ GRGKRT VYGAFLLA Y+ + ++
Sbjct: 695 GYEPSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYFGRGKRTSVYGAFLLAAYNPKTQNYE 754
Query: 684 SICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
+IC IGTGFSEA+LEE +L VI KP+P+Y + PDVWFEP
Sbjct: 755 TICNIGTGFSEALLEELHETLSPLVIDKPKPFYSHSTVPKDQPDVWFEP 803
>gi|339246701|ref|XP_003374984.1| DNA ligase 1 [Trichinella spiralis]
gi|316971746|gb|EFV55486.1| DNA ligase 1 [Trichinella spiralis]
Length = 825
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/606 (42%), Positives = 379/606 (62%), Gaps = 21/606 (3%)
Query: 152 NSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRIL 211
N S +E + E ++ K A +DP+ ACW GE+VP++ + I N + R+
Sbjct: 154 NCFSEQEDVVEPQN----YKPDATTYDPECNACWRAGEQVPYLAFAYTMKAIENTSSRLE 209
Query: 212 ITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES 271
I I+ N ++V+ P+DL+P +YL N++ P++E +ELGI + ++ KA+A++ GR+
Sbjct: 210 IIRILSNFFQSVIWLNPDDLLPCIYLCLNRLGPSYEAVELGIAEGTLQKAVAQSTGRSME 269
Query: 272 HVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRI 331
+K + GDLG+VA+ SR+ Q + PLT+ +F IA +G S KK +
Sbjct: 270 KIKADIADKGDLGIVAEMSRNMQRTIFATRPLTVAGIFAKLNQIAHLSGSSSMNKKLEMV 329
Query: 332 KALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP---- 387
K LLV+ DCE +YLIR L K+RIGLAEQ+LL AL A + E+ + ++
Sbjct: 330 KGLLVSCRDCEARYLIRCLSGKMRIGLAEQSLLVALAHAFAFIERKKENKKKLRDDALKE 389
Query: 388 -LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEI 446
L+E A I+K + P Y KIV L G+ L C TPGIP+ PMLA P+KG+ E+
Sbjct: 390 YLDECALIMKT--AECPDYGKIVDIALRHGLHALPEHCHITPGIPLKPMLAFPSKGIEEV 447
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPS-- 504
+ +F EF CE+KYDGERAQIH+ DG+V+++SRN E +TGK+PD+V + ++ +
Sbjct: 448 LKRFGSAEFACEWKYDGERAQIHFY-DGTVKVFSRNQENHTGKYPDIVELIPKVLSATNN 506
Query: 505 -------VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYR 557
+ S ++D EIVA+D E Q ILPFQ LSTR RK+ D+KV+V ++AFD+LY
Sbjct: 507 KNNQTDPISSCIIDSEIVAWDTENQSILPFQVLSTRKRKDAESGDVKVNVSVFAFDLLYL 566
Query: 558 NGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIK 617
NGQ L + R RR L EE G F F +L + D DEI +FL+ AV +CEGL++K
Sbjct: 567 NGQSLTTQPFRERRSMLRSLIEEMDGHFFFTKSLVTNDSDEIGQFLEEAVKGNCEGLMLK 626
Query: 618 TMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDS 677
T+D+DATYE +KRS WLKLKKDY+++ GD++DLV I + G G+R GVYG +LLACY+
Sbjct: 627 TLDKDATYEIAKRSHKWLKLKKDYLDNTGDTVDLVVIGGYLGVGRRVGVYGGYLLACYNP 686
Query: 678 NNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETS 737
EE+QSICKIGTGF + L++++ + +I P+ YYR++ +I+PD WF+P + E
Sbjct: 687 TTEEYQSICKIGTGFKDEDLQKQAEFFKQHIISAPKSYYRYSSSIAPDHWFDPVQVWEVK 746
Query: 738 NSPASI 743
+ SI
Sbjct: 747 AADLSI 752
>gi|452823268|gb|EME30280.1| DNA ligase 1 [Galdieria sulphuraria]
Length = 741
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 256/560 (45%), Positives = 377/560 (67%), Gaps = 8/560 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ R PF FL+ F+++ T R+ + I+ + R ++ TTP+DL+P VYL N + P
Sbjct: 121 WQPPSRTPFRFLAEAFEVMEMTTSRLALIKILTQVFRKIVNTTPDDLLPCVYLCTNMLGP 180
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
AHEGLEL G+A+++ AL+ A G + +K++ ++GD+G +A R++Q M KP LT
Sbjct: 181 AHEGLELKAGEATVLNALSSATGNSVKVLKERLIKLGDIGDLAAECRTTQQTMFKPPSLT 240
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I V+ FR +A AGK S ++++ ++ LLV+AT E +Y+ R++ KLRI +A +T++
Sbjct: 241 IQGVYQEFRTMANLAGKMSTKEREKHLQKLLVSATSQEAKYIARIVLGKLRIHIAYKTVI 300
Query: 365 AALGQA-AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTD-GVWNLSN 422
A+L A ++ K + S ++EA + V+S LP++++I+P L+ + L +
Sbjct: 301 ASLATVFAPCSKTVGKTADEMDSIVKEATATLNAVYSQLPMWDRIIPVLIQNKSTQGLED 360
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
C TPG+P+GPMLAKP K S+++ +FQ+ F CEYKYDG RAQIHYL DG+V+I+SRN
Sbjct: 361 HCRLTPGVPVGPMLAKPAKEASDVLERFQECSFVCEYKYDGMRAQIHYLPDGNVKIFSRN 420
Query: 483 AERNTGKFPDVV--LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
AE +T K+PD+V + + K +VRSF++D E+VAYD E + FQ L RARK V L
Sbjct: 421 AEDDTPKYPDIVENIKFALSKNKAVRSFIIDSEVVAYDPETNVMKSFQELQGRARKEVKL 480
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
DIKV VC++AFDIL+ NG+ LL+ L+ RRE L ++F G FQF T+ D + +
Sbjct: 481 EDIKVSVCVFAFDILFFNGESLLKWSLKERREKLIETFSPVQGKFQFTTSKVFTDWEGVD 540
Query: 601 KFLDAAVDASCEGLIIKTMDRD-ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
+ +D A+ A CEGL+IK + + ++YEPS RS NWLK+KKDY+ SIGDSLDLVPI A++G
Sbjct: 541 EMMDEAIQAGCEGLMIKALTGEYSSYEPSNRSQNWLKMKKDYMNSIGDSLDLVPIGAYYG 600
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR-SKVIPKPRPYYRF 718
RGKR+GV+GAFLLACY+S EEFQ++CK+GTGFS+ L + + ++ +P+PYY
Sbjct: 601 RGKRSGVFGAFLLACYNSETEEFQTVCKLGTGFSDEFLSSITKFYKDGHILAEPKPYYGV 660
Query: 719 AD--TISPDVWFEPTERPET 736
+D TI PDVWF+P + ET
Sbjct: 661 SDSPTIIPDVWFDPCQVWET 680
>gi|296812721|ref|XP_002846698.1| DNA ligase [Arthroderma otae CBS 113480]
gi|238841954|gb|EEQ31616.1| DNA ligase [Arthroderma otae CBS 113480]
Length = 890
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 270/587 (45%), Positives = 368/587 (62%), Gaps = 41/587 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F I T R++I LR V+ TP+DL+ V L NK+A
Sbjct: 218 WKAGDPVPYAALCTTFSHIEMTTKRLIILSHCALFLRQVLRLTPDDLLSTVQLMINKLAA 277
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP LT
Sbjct: 278 DYAGVELGIGESLIMKAVGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKALT 337
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-------------------TDCEPQY 345
+ V + IAK G SQE+K IK LL AA E ++
Sbjct: 338 VRGVHEGLLAIAKTQGSGSQERKIAGIKKLLSAADADKAGKGAKAIDITKDRGGASEAKF 397
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP-LEEAAKIVKQVFSVLPV 404
++R L+ KLR+GLAE+T+L AL A V +E + L + +I+K V+S LP
Sbjct: 398 IVRFLEGKLRLGLAERTVLVALAHAMVAHEAEMDGGKTASTDQLAKGEEILKSVYSELPS 457
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
YE I+PA+L G++NL + C PG+P+ PMLAKPTK +SE++++F+ FTCEYKYDGE
Sbjct: 458 YEVIIPAMLKHGIFNLPDNCKLQPGVPLKPMLAKPTKSISEVLDRFEGKHFTCEYKYDGE 517
Query: 465 RAQIHYLE------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
RAQIHY+ +G I+SRN+E + K+PD++ + KP +
Sbjct: 518 RAQIHYVSRDTIKDYPAASAALQKDGEGLSAIFSRNSEDLSKKYPDILEKLETWVKPGTQ 577
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
SFVLDCE VA+D +K+LPFQ L TR RK+V DIKV VC++AFD+L+ NG+P +++
Sbjct: 578 SFVLDCETVAWDTVNKKVLPFQQLMTRKRKDVKSEDIKVKVCVFAFDLLFLNGEPTVKKS 637
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATY 625
LR RR+ L+D+F G F FA + DL+EIQ LD +V ASCEGL++K +D D+ Y
Sbjct: 638 LRERRDLLHDAFVPIEGEFAFAQHGNTSDLEEIQTMLDESVKASCEGLMVKMLDTEDSGY 697
Query: 626 EPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSI 685
EPSKRS NWLK+KKDY+ IGDSLDLV + A+ GRGKRT VYGAFLLA Y++ + +++I
Sbjct: 698 EPSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYFGRGKRTSVYGAFLLAAYNTKTQNYETI 757
Query: 686 CKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
C IGTGFSEA+LEE +L VI KP+P+Y + PDVWFEP
Sbjct: 758 CNIGTGFSEALLEELHETLSPLVIDKPKPFYSHSTVPKDQPDVWFEP 804
>gi|390604378|gb|EIN13769.1| DNA ligase I [Punctularia strigosozonata HHB-11173 SS5]
Length = 811
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/588 (45%), Positives = 382/588 (64%), Gaps = 14/588 (2%)
Query: 152 NSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRIL 211
++V E +AE + L + E D K W+ G+ VP+ L+ F +I T R+
Sbjct: 147 DAVDEDENVAEESALAAL--SRIEEVDIK--GGWKTGDAVPYAALAKAFALIEATTKRLE 202
Query: 212 ITDIVCNMLRTVMETTPE----DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG 267
T I+ + L V+ + + L+ VYL N+++P + G+ELGIG++ ++KA++E+ G
Sbjct: 203 KTSILTSFLLLVIRRSAQGDTKSLLQTVYLCINRLSPDYVGVELGIGESLLVKAISESTG 262
Query: 268 RTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKK 327
R+ + VK ++ GDLGLVA+ S++SQ + KP LT+ VF R IA G SQ+KK
Sbjct: 263 RSLAVVKADLKKEGDLGLVAQHSKNSQKTLFKPKALTVPYVFSNLREIALSTGHSSQQKK 322
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP----N 383
+ I LL A E +Y+IR L+ KLRIG AE+T+L AL A V E+
Sbjct: 323 VSVITKLLAACQGSEAKYIIRSLEGKLRIGNAERTVLVALAHAVVLAEKERGSKKWSEEK 382
Query: 384 IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
+ + LEE A I+K V+S LP Y+ ++PALL G+ L C TPG+P+ PMLAKPTK +
Sbjct: 383 LTARLEEGANIIKSVYSELPTYDAVIPALLEHGIDGLKEHCKLTPGVPLKPMLAKPTKAI 442
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKP 503
E++++F++ FTCEYKYDGERAQ+H LEDGSV +YSRN+E + K+PD+V + R K
Sbjct: 443 GEVLDRFENKRFTCEYKYDGERAQVHRLEDGSVRVYSRNSEDMSKKYPDLVEQLPRCIKE 502
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLL 563
+ +SFVLD E VA D+ +K++PFQ LS R RK+V + DI+V VC++ FD+LY NG+PLL
Sbjct: 503 TTKSFVLDAEAVAIDKTTKKLMPFQELSRRKRKDVKVEDIQVRVCLFGFDLLYLNGEPLL 562
Query: 564 QEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDA 623
++ L RR L + F G FQFA + S ++IQ FL+ +V CEGL++K ++ +A
Sbjct: 563 RKSLSERRGLLREHFHPVDGEFQFAKSSDSQSTEDIQSFLEESVKDGCEGLMVKMLETEA 622
Query: 624 T-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+ YEPS+RS+NWLKLKKDY+ +GDS DLV + A++G+GKRT VYGAFLLACYD+++EE+
Sbjct: 623 SFYEPSRRSVNWLKLKKDYLAGVGDSFDLVVVGAYYGKGKRTNVYGAFLLACYDADSEEY 682
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
Q+ICKIGTGFSE L++ +L+ KPR + PDVW EP
Sbjct: 683 QTICKIGTGFSEDALQQHYDTLKPLEQSKPRGDIKIGGA-KPDVWLEP 729
>gi|410982858|ref|XP_003997763.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1 [Felis catus]
Length = 903
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/568 (45%), Positives = 376/568 (66%), Gaps = 23/568 (4%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+P++Y
Sbjct: 266 YHPVDDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPILY 325
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTE-SHVKKQYQEMGDLGLVAKASRSSQS 295
L+ N++ P +GLELG+GD ++KA+A+A G+ V ++ + G++G SR+ +
Sbjct: 326 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGKQGVERVPREAADWGEVGRGGGGSRARRR 385
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
P P T T + RL S KK + IK L VA E +++ R L +LR
Sbjct: 386 RGPHPAPQTPTGLP---RLX-------STAKKMDVIKGLFVACRHSEARFIARALSGRLR 435
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLP 403
+GLAEQ++LAAL QA PP + ++ LEE I+KQ F +P
Sbjct: 436 LGLAEQSVLAALAQAVSLTPPGQDFPPAVVDAGKGRTAEARKTWLEEQGMILKQTFCEVP 495
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
++I+P LL G+ +L C +PG+P+ PMLA PT+GVSE++ +F++ FTCEYKYDG
Sbjct: 496 DLDRIIPVLLEHGLEHLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDG 555
Query: 464 ERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQK 523
+RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++
Sbjct: 556 QRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQ 615
Query: 524 ILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG 583
I PFQ L+TR RK V +DI+V VC+YAFD++Y NG+ L++E L RR+ L ++F + G
Sbjct: 616 IQPFQVLTTRKRKEVDAADIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVQTEG 675
Query: 584 FFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE 643
F FAT+L + D D+I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 676 EFVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLD 735
Query: 644 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSS 703
+GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LE+ S
Sbjct: 736 GVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEDHFQS 795
Query: 704 LRSKVIPKPRPYYRFADTISPDVWFEPT 731
L++ V+P PR Y R ++PD W +P+
Sbjct: 796 LQALVLPTPRSYVRADGAVAPDHWLDPS 823
>gi|255941662|ref|XP_002561600.1| Pc16g13010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586223|emb|CAP93971.1| Pc16g13010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 906
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 279/608 (45%), Positives = 380/608 (62%), Gaps = 47/608 (7%)
Query: 169 LLKKKAGEFDPKMVAC-------WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLR 221
L KK +F K+ A W+ G VP+ L F ++ R+ ITD LR
Sbjct: 215 LAKKSIEKFQAKLQASGKDPYPDWKAGTPVPYAALCTTFSLVEMTRKRLEITDHCSLFLR 274
Query: 222 TVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMG 281
V+ +P D +P V L NK+A + G+ELGIG++ I+KA+ E GR+ + +K +E+G
Sbjct: 275 QVLRLSPADFLPTVQLMINKLAADYAGIELGIGESLIMKAIGECTGRSLAVIKADQREIG 334
Query: 282 DLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD- 340
DLGLVA SRS+Q M KP PLT+ V + IAK G SQ+KK + IK LL AA
Sbjct: 335 DLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLLGIAKVQGHGSQDKKISGIKKLLSAADAD 394
Query: 341 ---------------CEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQ 385
E +Y++R L+ KLR+GLAE+T+L A+ +A V + I
Sbjct: 395 TAGKGVDITKDKGGPSEAKYIVRFLEGKLRLGLAEKTVLVAVSRA-VQTHEAELAGNKIP 453
Query: 386 SPLEEAA--KIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
S E AA I K V+S LP YE I+PA+L G++ L C +PGIPI PMLAKPTK +
Sbjct: 454 SAEEMAAGENIFKSVYSELPAYEVIIPAVLEHGLFKLPEVCKLSPGIPIKPMLAKPTKSI 513
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE------------------IYSRNAER 485
+E++++F+ EFTCEYKYDGERAQIH++ S+ I+SRN+E
Sbjct: 514 TEVLDRFEGKEFTCEYKYDGERAQIHFVSPDSIHQYPGAVNTLQKDSKGLSSIFSRNSED 573
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV 545
+ K+PDV+ + KP V+SFVLDCE VA+D E +K+LPFQ L TR RK+V D+KV
Sbjct: 574 LSKKYPDVLGKLDTWVKPDVKSFVLDCETVAWDTEAKKVLPFQQLMTRKRKDVKAEDVKV 633
Query: 546 DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDA 605
VC+YAFD+L+ NG+P +++ LR RRE ++ F+ G FQFA S LDEIQ+ L+A
Sbjct: 634 KVCVYAFDLLFFNGEPCVKKSLRERRELMHKCFQPVEGEFQFAQYGNSSVLDEIQELLEA 693
Query: 606 AVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
+V ASCEGL++K +D ++ YEPS RS NWLK+KKDY+ +GDSLDLV + A++GRGKRT
Sbjct: 694 SVKASCEGLMVKMLDTAESGYEPSMRSRNWLKVKKDYLAGVGDSLDLVVLGAYYGRGKRT 753
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--I 722
VYGAFLLA Y+ +N+ +++IC IGTGFSE +LEE +L VI +P+P+Y +
Sbjct: 754 SVYGAFLLAAYNPSNDTYETICNIGTGFSEVLLEELHQTLVPLVIDRPKPFYTHSTVPKD 813
Query: 723 SPDVWFEP 730
PDVWFEP
Sbjct: 814 QPDVWFEP 821
>gi|448114611|ref|XP_004202619.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
gi|359383487|emb|CCE79403.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
Length = 759
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 270/555 (48%), Positives = 367/555 (66%), Gaps = 16/555 (2%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNM-LRTVMETTPEDLVPVVYLAANKIAPAHE- 247
R+ + L+ +F+ I +E+ R+ IT + N L + + PE LV VVYL N++ P +E
Sbjct: 145 RLYYTELADLFEKIEHESSRLTITSYMSNFFLHILKHSKPEKLVKVVYLCINRLGPDYEP 204
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITK 307
LELG+G+ +IKA++E GR+ + +KK Y E+GDLG+VA+ SR Q M KP L +
Sbjct: 205 DLELGLGETILIKAVSECYGRSSAKIKKDYHEVGDLGIVAQKSRIGQPTMFKPAKLDVDS 264
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVA--ATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
VF+ IAK GKDSQ KK + I +L A + E ++++R L+ KLRIGLAE+T+L
Sbjct: 265 VFNNLTKIAKATGKDSQAKKISLINKMLTACDSKTNEAKFIVRSLEGKLRIGLAEKTVLI 324
Query: 366 ALGQAAVYNEQHSKPPPNIQSP-LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
AL QA + K P + + L +A ++++ FS +P YE I+ G+ NL C
Sbjct: 325 ALAQAFI---NWDKSIPKVTTEILAKAEDVIREAFSQIPNYEIIIMKAYEFGILNLLEHC 381
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
TPGIP+ PMLAKPTK V+E++++FQ+ EFTCEYKYDGERAQ+H L G V IYSRN+E
Sbjct: 382 HLTPGIPLKPMLAKPTKSVTEVMDRFQNEEFTCEYKYDGERAQVHVLSSGEVRIYSRNSE 441
Query: 485 RNTGKFPDVVLAVSRLKK----PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
+ ++PD+V + K + S +LDCE VA+DRE+ KILPFQ LSTR RK+V
Sbjct: 442 DMSQRYPDLVSITKDILKLQDGSQISSMILDCEAVAWDREQNKILPFQVLSTRKRKDVEE 501
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
DIKV +C++AFDILY N PL+ + L RR+ LYD+F G FQFAT S DLDEIQ
Sbjct: 502 KDIKVHICLFAFDILYYNDAPLITKSLTERRKVLYDNFNSITGKFQFATHKDSNDLDEIQ 561
Query: 601 KFLDAAVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
+FLD ++ SCEGL+IK ++ D+ YEPSKRS NWLKLKKDY+ +GDSLDLV I A+ G
Sbjct: 562 QFLDQSMKDSCEGLMIKMLNGVDSYYEPSKRSRNWLKLKKDYLSGVGDSLDLVVIGAYIG 621
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFA 719
+GKRTG YG FLLA Y+++ E+++ CKIGTGFS+ L + L+ I P+PYY +
Sbjct: 622 KGKRTGTYGGFLLASYNTDTGEYETTCKIGTGFSDEDLASLHAKLKPTEIDTPKPYYVYD 681
Query: 720 DTIS---PDVWFEPT 731
+ S PDVW EPT
Sbjct: 682 TSNSNAQPDVWLEPT 696
>gi|150863848|ref|XP_001382465.2| hypothetical protein PICST_56005 [Scheffersomyces stipitis CBS
6054]
gi|149385104|gb|ABN64436.2| ATP dependent DNA ligase [Scheffersomyces stipitis CBS 6054]
Length = 719
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 277/587 (47%), Positives = 384/587 (65%), Gaps = 16/587 (2%)
Query: 157 KEKIAELKSNIVLLKKKAGEFDPKMVACWEK-GERVPFIFLSLVFDMISNETGRILITDI 215
K+K E+K L+K E + + EK ++P+ L+ V D I E+ R+ IT I
Sbjct: 74 KDKTEEIKEASELIKLSEKEHEKHV---GEKLSAKIPYSKLTDVLDKIEAESSRLKITAI 130
Query: 216 VCNM-LRTVMETTPEDLVPVVYLAANKIAPAHE-GLELGIGDASIIKALAEACGRTESHV 273
V L + ++T + LV +VYL N++ P +E LELG+G+ +IKA++E GR + +
Sbjct: 131 VSEFFLEILKQSTVDKLVKIVYLFINRLGPDYEPDLELGLGETILIKAISECYGRPSTKI 190
Query: 274 KKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKA 333
KK YQE+GDLGLVA+ SRS Q M KP PL + +VF+ IAK GKDSQ KK + I
Sbjct: 191 KKDYQEVGDLGLVAQKSRSGQPTMFKPAPLDVDQVFENLTKIAKSTGKDSQAKKISLINK 250
Query: 334 LLVA--ATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEA 391
+L A A E ++LIR L+ KLRIGLAE+T+L L QA V E N + L ++
Sbjct: 251 MLTACNAKSSEAKFLIRSLEGKLRIGLAEKTVLIGLAQAFVNYEAKDSKRINPEK-LTQS 309
Query: 392 AKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ 451
+V++ FS +P YE ++ G++NL + C TPGIP+ PMLAKPTK +SE++++FQ
Sbjct: 310 EDVVREAFSQIPNYEILIRNAYEYGIFNLLDHCQLTPGIPLKPMLAKPTKSISEVLDRFQ 369
Query: 452 DMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVS---RLKKPSVRSF 508
EFTCEYKYDGERAQ+H L DG+V IYSRN+E + ++PD++ + + ++ S
Sbjct: 370 GEEFTCEYKYDGERAQVHLLHDGTVRIYSRNSEDMSERYPDLISIMKDFIKTQEGQAPSM 429
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
+LDCE VA+DR KILPFQ LSTR RK+V DI V +C++AFDILY + +PL+ + L+
Sbjct: 430 ILDCEAVAWDRVANKILPFQVLSTRKRKDVDEKDITVHICLFAFDILYFDNEPLITKSLK 489
Query: 569 VRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEP 627
RR+ + ++ G FQFAT S +LDE+Q+FLD +V SCEGL++K ++ +++ YEP
Sbjct: 490 ERRQVMEENLTPMDGKFQFATAKNSSNLDELQQFLDQSVKDSCEGLMVKMLNGKESYYEP 549
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
SKRS NWLKLKKDY+ +GDSLDLV I A+ GRGKRTG YG FLLA Y+ + E+++ CK
Sbjct: 550 SKRSRNWLKLKKDYLAGVGDSLDLVVIGAYIGRGKRTGNYGGFLLASYNQDTGEYETTCK 609
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTIS---PDVWFEPT 731
IGTGFS+ L + L+ I P+PYY + T S PDVWFEPT
Sbjct: 610 IGTGFSDEDLASLHTKLKPTEISVPKPYYVYDTTNSNAKPDVWFEPT 656
>gi|365981523|ref|XP_003667595.1| hypothetical protein NDAI_0A01940 [Naumovozyma dairenensis CBS 421]
gi|343766361|emb|CCD22352.1| hypothetical protein NDAI_0A01940 [Naumovozyma dairenensis CBS 421]
Length = 765
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/544 (47%), Positives = 374/544 (68%), Gaps = 4/544 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE-GL 249
+P+ + +F I + R+ I + + L +M+ P++L+PV YL NK+ P +E GL
Sbjct: 159 IPYKEVCQLFQEIETTSSRLSIIKLCSDFLIKIMKQDPQNLIPVTYLFINKLGPDYEPGL 218
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G+ ++K ++E+CG++ + ++ QY+E+GDLG +A +R+ Q M KP PLT+ +VF
Sbjct: 219 ELGLGEGLLMKTISESCGKSLTQIRAQYRELGDLGQIALEARNVQPTMFKPKPLTVGEVF 278
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATD-CEPQYLIRLLQSKLRIGLAEQTLLAALG 368
+ ++IAK AGKDSQ KK IK +L A D E ++LIR L+SKLRIGLAE+T+L +L
Sbjct: 279 NNLKMIAKAAGKDSQTKKIKLIKRMLTACEDGVEAKFLIRSLESKLRIGLAEKTVLISLS 338
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
+A + E + +++ LE A ++ F +P YE ++ + L G+ NL+ CS P
Sbjct: 339 KALLVKEFDANKDFDMEL-LETAEGKIRDAFCQVPNYEIVINSCLQYGIMNLNEHCSLRP 397
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
GIP+ PMLAKPTK ++EI+++FQ FT EYKYDGERAQ+H LEDG++ IYSRN E T
Sbjct: 398 GIPLKPMLAKPTKAINEILDRFQGETFTSEYKYDGERAQVHLLEDGTMRIYSRNGENMTE 457
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVC 548
++P++ + + ++ +LDCE VA+D+E+QKILPFQ LSTR RK+V D+KV VC
Sbjct: 458 RYPEIHIGDFVKDRNETKTLILDCEAVAWDKEQQKILPFQVLSTRKRKDVLAKDVKVRVC 517
Query: 549 IYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVD 608
++AFDIL N L+ L+ RRE L+ PG FQ+AT LT+ +LDE+QKFLD +V+
Sbjct: 518 LFAFDILCHNSNKLINYSLKERREILHRVTTPAPGEFQYATELTTSNLDELQKFLDQSVN 577
Query: 609 ASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+E IGDSLDL + A++GRGKRTG Y
Sbjct: 578 DSCEGLMVKMLEGEESHYEPSKRSRNWLKLKKDYLEGIGDSLDLCVLGAYYGRGKRTGTY 637
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVW 727
G FLL CY+ N EF++ CKIGTGFS+ ML++ L++ VI P+ Y + + PDVW
Sbjct: 638 GGFLLGCYNDNTGEFETCCKIGTGFSDEMLQQLHEKLKATVIDGPKATYIYDSSAEPDVW 697
Query: 728 FEPT 731
FEP+
Sbjct: 698 FEPS 701
>gi|403412845|emb|CCL99545.1| predicted protein [Fibroporia radiculosa]
Length = 826
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/555 (47%), Positives = 365/555 (65%), Gaps = 10/555 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTP----EDLVPVVYLAAN 240
WE GE +P+ L+ VF +I T R+ T ++ V++ + E ++ VYL N
Sbjct: 191 WEVGEPIPYAALTKVFSLIEATTKRLEKTALLTAFFLLVIQRSAKGDTESMLQAVYLCIN 250
Query: 241 KIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
+++P + G+ELGIG++ +IKA+ E+ GR+ + VK + ++ GDLGLVA S++SQ + KP
Sbjct: 251 RLSPDYIGIELGIGESLLIKAIGESTGRSLAVVKSELKKEGDLGLVAMNSKNSQKTLFKP 310
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
PLT+ VF + IA G SQ KK + I LL A E +Y++R L+ KLRIG AE
Sbjct: 311 KPLTVPFVFTNLKDIALSTGHSSQNKKVSIITKLLAACQGSEAKYIVRSLEGKLRIGNAE 370
Query: 361 QTLLAALGQAAVYNEQHSKP----PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
+T+L AL A V EQ + + LEE+A +VK V+S LP Y+ +VPALL G
Sbjct: 371 RTVLVALAHAFVLAEQERANKKINSEKLTARLEESANVVKSVYSELPTYDLVVPALLEAG 430
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ L C TPG+P+ PMLAKPTK + E++++F++ FTCEYKYDGERAQ+H LEDG+V
Sbjct: 431 IDKLREKCKLTPGVPLKPMLAKPTKAIGEVLDRFENKRFTCEYKYDGERAQVHKLEDGTV 490
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
++SRN+E + K+PD++ + S +SFVLD E VA D++ K++PFQ LS R RK
Sbjct: 491 GVFSRNSEDMSKKYPDLMEQLPNCINESTKSFVLDAEAVAIDKDTGKLMPFQELSRRKRK 550
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+V + DIKV VC++AFD+LY NG+PLLQ+ L RR L D F+ PG F FA +
Sbjct: 551 DVKVEDIKVRVCLFAFDLLYLNGEPLLQKSLAERRLLLRDHFQRVPGEFDFAKSSDCETT 610
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+EIQ FL+ +V CEGL++K ++ D + YEPS+RS+NWLKLKKDY+ +GDSLDLV +
Sbjct: 611 EEIQAFLEESVKDGCEGLMVKMLEEDPSFYEPSRRSVNWLKLKKDYLAGVGDSLDLVVVG 670
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
A++G+GKRT VYGAFLLACYD++ EE+Q+ICKIGTGFSE L+ +L+ K R
Sbjct: 671 AYYGKGKRTNVYGAFLLACYDADAEEYQTICKIGTGFSEEALQAHHDTLKPLETTKARAD 730
Query: 716 YRFADTISPDVWFEP 730
+ PDVW EP
Sbjct: 731 IKIGGA-KPDVWLEP 744
>gi|346326802|gb|EGX96398.1| DNA ligase (Polydeoxyribonucleotide synthase) [Cordyceps militaris
CM01]
Length = 861
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 292/716 (40%), Positives = 426/716 (59%), Gaps = 70/716 (9%)
Query: 78 NSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPI--SNQIDNPIDSEK 135
++ + S +P K+ D P E +E +PI Q+D+P+ E
Sbjct: 71 DAKNESKAPIKKEEDDEDAPVAKRPRRRRPKVEDDDEDVVPTTEPIKKQEQMDSPVKVES 130
Query: 136 ESQPTPPSPKKRKVNVN----SVSAKEKIAELKSNIVLLKKKAGEFDPKMVAC------- 184
+P+P P K++ + +A E ++++ +I GE P++VA
Sbjct: 131 SVEPSPEPPVKKEKRADKEFKEAAASESGSDVEGDI------EGEEKPEVVAKARKLAQT 184
Query: 185 ------------WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV 232
W+ G VP+ L F ++ T R++I + LR VM TP DL+
Sbjct: 185 KLSSKAKDPYPDWKAGTPVPYAALCTTFSLVEMTTKRLIIMEHCALFLRQVMRLTPNDLL 244
Query: 233 PVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRS 292
P V L NK+AP + G+ELGIG++ I+KA+ E+ GR+ +K +++GDLGLVA SRS
Sbjct: 245 PTVLLMINKLAPDYAGIELGIGESLIMKAIGESTGRSLQVIKTDQKDIGDLGLVALKSRS 304
Query: 293 SQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC----------- 341
+Q M KP PLT+ V IA +G +Q +K + IK LL +A+D
Sbjct: 305 TQPTMFKPKPLTVRGVHQGLMGIATISGNGAQGRKVDGIKKLL-SASDAHNTGKVDITKD 363
Query: 342 -----EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVK 396
E +Y+IR L+ KLR+GLAE+T+L +L QA V +E + S +E+ I+K
Sbjct: 364 KGGPSEAKYIIRFLEGKLRLGLAEKTVLVSLAQAIVCHEADQRGKLPSTSDMEKGESILK 423
Query: 397 QVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFT 456
V+S LP Y+ I+PA+L+ G+ NL C PG+P+ PMLAKPTK ++E++++F+ FT
Sbjct: 424 TVYSELPSYDVIIPAMLSHGILNLHEHCKLQPGVPLKPMLAKPTKAITEVLDRFEGQTFT 483
Query: 457 CEYKYDGERAQIHYLED-------------------GSVEIYSRNAERNTGKFPDVVLAV 497
CEYKYDGERAQIHY+ G I+SRN+E + K+PD++ +
Sbjct: 484 CEYKYDGERAQIHYVAKDAPQELSQAAPGANKDAAKGVASIFSRNSEDLSKKYPDILAKL 543
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYR 557
K +SFVLDCE VA+D E++ +LPFQ L TR +K+V + D+KV VC++AFD+LY
Sbjct: 544 HSWVKDDTKSFVLDCETVAWDTEEKTVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLYL 603
Query: 558 NGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIK 617
NGQP++++ LR RRE L +F G F FAT++ +LDEIQ FLD +V ASCEGL++K
Sbjct: 604 NGQPVVEKSLRERRELLQQAFTPVEGEFSFATSMDGQELDEIQVFLDESVKASCEGLMVK 663
Query: 618 TMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYD 676
+D ++ YEPSKRS NWLK+KKDY+ +GDSLDLV + A++GRGKRT VYGAFLLACY+
Sbjct: 664 MLDGTESGYEPSKRSRNWLKIKKDYLAGVGDSLDLVVLGAYYGRGKRTSVYGAFLLACYN 723
Query: 677 SNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
++ ++++C IGTGFSE +LEE ++L + VI +P+P+Y + PDVWFEP
Sbjct: 724 PGSDTYETVCNIGTGFSEQVLEELHAALSAIVIDRPKPFYAHSTGNQHQPDVWFEP 779
>gi|50289929|ref|XP_447396.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526706|emb|CAG60333.1| unnamed protein product [Candida glabrata]
Length = 724
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 268/573 (46%), Positives = 384/573 (67%), Gaps = 13/573 (2%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE-G 248
+VP+ L +F+ I + R+ I + + +M+ P++L+PV YL NK+ P +E G
Sbjct: 117 KVPYSDLCNLFEEIEGTSSRLAIIKLCSDFFIKIMKEDPQNLIPVTYLFINKLGPDYEPG 176
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
LELG+G+ ++K ++E+CG++ +K QY+E+GDLG +A +R+ Q M KP PL + +V
Sbjct: 177 LELGLGENLLMKTISESCGKSMQQIKNQYREIGDLGQIALEARNVQPTMFKPKPLVVGEV 236
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F+ + IAK GKDSQ KK IK +L A E ++LIR L+SKLRIGLAE+T+L AL
Sbjct: 237 FENLKTIAKSQGKDSQTKKMKLIKRMLTACQGTEAKFLIRSLESKLRIGLAEKTVLIALS 296
Query: 369 QAA-VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
+A +++E++S P++ +E+A + ++ F +P YE ++ A L G+ L C+
Sbjct: 297 KALLIHDEKYSNKEPSMDV-VEQAEQKIRDAFCQVPNYELVINACLDYGIMKLDEHCTIQ 355
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNT 487
PGIP+ PMLAKPTK ++E++++FQ FT EYKYDGERAQ+H L+DG++ IYSRN E T
Sbjct: 356 PGIPLKPMLAKPTKAINEVLDRFQGQTFTSEYKYDGERAQVHLLKDGTMRIYSRNGENMT 415
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV 547
++P++ + S S +LDCE VA+D+E+ KILPFQ L+TR RK+V+++++KV V
Sbjct: 416 ERYPEIQIKDFLADPASTTSLILDCEAVAWDKEQNKILPFQVLTTRKRKDVNINEVKVRV 475
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
C++AFDIL N L+ E L RRE L++ + G FQ+AT +T+ +LDE+QKFLD +V
Sbjct: 476 CLFAFDILLHNDMRLINEPLSKRREVLHEVTKPVEGEFQYATQMTTSNLDELQKFLDESV 535
Query: 608 DASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
SCEGL++K MD ++ YEPSKRS NWLKLKKDY+E +GDSLDL + A+ GRGKRTG
Sbjct: 536 KNSCEGLMVKMMDGVESYYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYFGRGKRTGT 595
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
YG FLL CY++++E+F++ CKIGTGFSE ML+ L VI P+ Y F + PDV
Sbjct: 596 YGGFLLGCYNADSEDFETCCKIGTGFSEEMLQTLYEKLSPTVIDGPKGTYVFDSSAEPDV 655
Query: 727 WFEPTERPET-----SNSP----ASIVYDSQIT 750
WFEPT E S SP S VYD I+
Sbjct: 656 WFEPTMLFEVLTADLSLSPIYKAGSSVYDKGIS 688
>gi|171686862|ref|XP_001908372.1| hypothetical protein [Podospora anserina S mat+]
gi|170943392|emb|CAP69045.1| unnamed protein product [Podospora anserina S mat+]
Length = 957
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 263/583 (45%), Positives = 371/583 (63%), Gaps = 39/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F ++ T R+ I LR V+ TP+DL+PVV L NK+AP
Sbjct: 295 WKAGEPVPYAALCTTFSLVELTTKRLEIMAHCALFLRQVLRLTPDDLLPVVLLMINKLAP 354
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K+ +E+GDLGLVA SRS+Q M KP PLT
Sbjct: 355 DYAGIELGIGESLIMKAIGESTGRSLAIIKQDQKEIGDLGLVAVKSRSTQPTMFKPKPLT 414
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
+ V IA G +Q +K + IK LL A E +YL+R
Sbjct: 415 VRGVLKGLMGIATTTGNGAQGRKVDGIKKLLSQADANGAKKVDITKDKGGPSEAKYLVRF 474
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
L+ KLR+GLAE++++ +L QA V +E K + E+ I+K V+S LP Y+ I+
Sbjct: 475 LEGKLRLGLAEKSVIVSLSQAVVAHEAAQKGVAPSAADFEKGEAILKTVYSELPSYDVII 534
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PA++ G+ NL + C PG+P+ PMLA PTK ++E++++F++ FTCEYKYDGERAQIH
Sbjct: 535 PAMVEHGIMNLRDHCKLRPGVPLKPMLANPTKAITEVLDRFENKLFTCEYKYDGERAQIH 594
Query: 470 YLE-------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
Y+ +G I+SRN+E + K+PDV+ +S K +SFVL
Sbjct: 595 YVAKDTAEELSQSAANASKEVGNGVAAIFSRNSEDLSKKYPDVLAKLSTWVKDDTKSFVL 654
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D +++K+LPFQ L TR +K+V + ++KV VC++AFD+LY NG+ ++ + LR R
Sbjct: 655 DCESVAWDVDEKKVLPFQQLMTRKKKDVKIEEVKVKVCVFAFDLLYLNGEAVVNKSLRER 714
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSK 629
RE L+ SF G F FAT++ +LDEIQ FLD +V ASCEGL++K +D ++ YEPSK
Sbjct: 715 RELLHKSFTPVEGEFAFATSMNGQELDEIQTFLDESVKASCEGLMVKMLDGEESGYEPSK 774
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NW LKKDY+ IGDSLDLV + A+ G+GKRT VYGAFLLACY+ + ++++C IG
Sbjct: 775 RSRNW--LKKDYLAGIGDSLDLVVLGAYFGKGKRTSVYGAFLLACYNPGTDMYETVCNIG 832
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
TGFSEA+LEE + L I +P+P+Y PDVWFEP
Sbjct: 833 TGFSEAVLEELHAQLSKITIDRPKPFYAHSSGGQHQPDVWFEP 875
>gi|315050570|ref|XP_003174659.1| DNA ligase [Arthroderma gypseum CBS 118893]
gi|311339974|gb|EFQ99176.1| DNA ligase [Arthroderma gypseum CBS 118893]
Length = 890
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 270/589 (45%), Positives = 365/589 (61%), Gaps = 45/589 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F I T R++I LR V+ TP+DL+ V L NK+A
Sbjct: 218 WKAGDPVPYAALCTTFSQIELTTKRLIILSHCALFLRQVLRLTPDDLLSTVQLMINKLAA 277
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+K++ E+ GR+ + +K E+GDLGLVA SRS+Q M KP LT
Sbjct: 278 DYAGIELGIGESLIMKSIGESTGRSLAVIKADQNEIGDLGLVAAKSRSNQPTMFKPKALT 337
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-------------------TDCEPQY 345
+ V + IAK G SQ+KK IK LL AA E ++
Sbjct: 338 VRGVHEGLLAIAKTHGTGSQDKKIAGIKKLLSAADADKTGKGAKAIDITKDRGGASEAKF 397
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH---SKPPPNIQSPLEEAAKIVKQVFSVL 402
++R L+ KLR+GLAE+T+L AL A V +E K P Q L + I+K V+S L
Sbjct: 398 IVRFLEGKLRLGLAERTVLVALAHAMVAHEAEINGGKAPSTDQ--LAKGEDILKSVYSEL 455
Query: 403 PVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYD 462
P YE I+PA+L G++NL + C PG+P+ PMLAKPTK +SE++++F+ FTCEYKYD
Sbjct: 456 PSYEVIIPAMLKHGIFNLPDNCKLQPGVPLKPMLAKPTKAISEVLDRFEGKHFTCEYKYD 515
Query: 463 GERAQIHYLE------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPS 504
GERAQIHY+ +G I+SRN+E + K+PD++ + KP
Sbjct: 516 GERAQIHYISRDTIKDYPAASTTLQKDGEGLCAIFSRNSEDLSKKYPDILEKLETWVKPG 575
Query: 505 VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQ 564
SFV+DCE VA+D +K+LPFQ L TR RK+V DIKV VC++AFD+L+ NG+P ++
Sbjct: 576 THSFVVDCETVAWDTVNKKVLPFQQLMTRKRKDVKSEDIKVKVCVFAFDLLFLNGEPTVK 635
Query: 565 EQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDA 623
+ LR RR L+ +F G F FA + DL+EIQ LD +V ASCEGL++K +D D+
Sbjct: 636 KTLRERRALLHGAFVPTEGEFAFAQHGNTSDLEEIQTMLDESVKASCEGLMVKMLDTEDS 695
Query: 624 TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
YEPSKRS NWLK+KKDY+ IGDSLDLV + A+ GRGKRT VYGAFLLA Y+ + ++
Sbjct: 696 GYEPSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYFGRGKRTSVYGAFLLAAYNPKTQNYE 755
Query: 684 SICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
+IC IGTGFSEA+LEE +L VI KP+P+Y + PDVWFEP
Sbjct: 756 TICNIGTGFSEALLEELHETLSPLVIDKPKPFYSHSTVPKDQPDVWFEP 804
>gi|378733666|gb|EHY60125.1| DNA ligase 1 [Exophiala dermatitidis NIH/UT8656]
Length = 931
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 270/615 (43%), Positives = 390/615 (63%), Gaps = 51/615 (8%)
Query: 157 KEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIV 216
K+++A++++ I K +G+ DP W+ G+ VP+ L F +I T R+ I
Sbjct: 244 KKQVAQIQATI----KSSGK-DP--YPDWKAGDPVPYAALCTTFSLIELTTKRLQIIAYC 296
Query: 217 CNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQ 276
L+ V+ TPEDL+P V L NK+A + G+ELGIG++ I+KA+ E+ GR+ + +K
Sbjct: 297 SAFLQQVLRLTPEDLLPTVQLMLNKLAADYAGIELGIGESLIMKAIGESSGRSLAVIKAD 356
Query: 277 YQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLV 336
+ ++GDLGLVA S+S QS M KP PLT+ V IAK G+ SQ++K I L+
Sbjct: 357 HHKIGDLGLVAAKSKSKQSQMFKPKPLTVRGVHQGLLEIAKMEGQGSQDQKVRAINRLMA 416
Query: 337 AA----------------TDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE--QHS 378
+A E ++L+R L+ KLR+GLAE+T++ AL QA V +E +
Sbjct: 417 SADVSSASKAVDINKDKGGPSEAKFLVRFLEGKLRLGLAEKTVIVALAQAVVTHEAAKKG 476
Query: 379 KPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAK 438
K P Q EAA +K V+S LP YE I+PA+L G++NL +C PG+P+ PMLAK
Sbjct: 477 KVPSTDQLAKGEAA--LKTVYSELPSYEVIIPAMLEHGIFNLHESCKLQPGVPLKPMLAK 534
Query: 439 PTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLE---------------------DGSVE 477
PTK ++E++++F+ +FTCEYKYDGERAQIHY+ G
Sbjct: 535 PTKSITEVLDRFEGKDFTCEYKYDGERAQIHYVAPEAKSEFPAAENTLAKDPKNVKGLAA 594
Query: 478 IYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
I+SRN+E + K+PD++ ++ KPS +SFVLDCE VA+D + +K+LPFQ L TR RK+
Sbjct: 595 IFSRNSEDLSKKYPDILEKLNTWIKPSTKSFVLDCETVAWDPQNKKVLPFQQLMTRKRKD 654
Query: 538 VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD 597
V S++ V VC++AFD+L+ NGQPL+++ LR RRE L+++F G F FA+ + D++
Sbjct: 655 VKTSEVTVKVCVFAFDLLFYNGQPLVKKSLRERREILHNAFVPVVGEFSFASYGDTRDIE 714
Query: 598 EIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAA 656
+IQ LD +V ASCEGL++K +D ++ YEPSKRS NWLK+KKDY+ +GDSLDLV + A
Sbjct: 715 QIQHLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLVVLGA 774
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYY 716
++G+GKRT YGAFLL Y+ + F+++C IGTGFSEA+LEE L VI P+P+Y
Sbjct: 775 YYGKGKRTSWYGAFLLGAYNEETQTFETVCNIGTGFSEAILEEFYKDLSELVIDGPKPFY 834
Query: 717 RFADTIS--PDVWFE 729
+ + PDVWFE
Sbjct: 835 SHSTVKNDQPDVWFE 849
>gi|321262088|ref|XP_003195763.1| DNA ligase [Cryptococcus gattii WM276]
gi|317462237|gb|ADV23976.1| DNA ligase, putative [Cryptococcus gattii WM276]
Length = 803
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 263/555 (47%), Positives = 361/555 (65%), Gaps = 10/555 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNML------RTVMETTPEDLVPVVYLA 238
W+ GE VP+ L F+ I T R+ I +++ L T +T L+ VVYL
Sbjct: 172 WKDGEAVPYSALVSTFEKIEATTKRLEILELLTQFLLVVAKRDTATDTKGSMLLKVVYLC 231
Query: 239 ANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMR 298
N++ P + G+ELGIG++ ++KA+AE+ GR +K+ ++ GDLG VA SR++QS M
Sbjct: 232 INRLCPDYMGIELGIGESLLVKAIAESTGRAMPKIKEDLKKEGDLGKVATNSRNTQSTMF 291
Query: 299 KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGL 358
KP PLT+ VF IAK G SQ KK IK LL A E +++IR L+ KLRIGL
Sbjct: 292 KPKPLTVPYVFQCLTEIAKATGNASQAKKVGIIKKLLAACQSTEAKFIIRSLEGKLRIGL 351
Query: 359 AEQTLLAALGQAAVYNEQHSKPPP--NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
A++T++ AL A V K P + LE+ A+ VK V+S LP Y+ ++PALL DG
Sbjct: 352 ADKTVVVALAHAIVLKTIGDKKPSPEKLAIMLEQGAETVKAVYSELPSYDLVIPALLQDG 411
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
V L C TPG+P+ PMLAKPTK ++E++++F+ EFTCEYKYDGERAQ+H LEDG++
Sbjct: 412 VEGLRKHCKLTPGVPLKPMLAKPTKAITEVLDRFEGKEFTCEYKYDGERAQVHLLEDGTI 471
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
++SRN+E + K+PD++ + R KP+ ++FV+D E VAYD E +KILPFQ LS R RK
Sbjct: 472 SVFSRNSENMSAKYPDLIDQIPRALKPTAKTFVIDAEAVAYDLETKKILPFQDLSRRKRK 531
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+V DI V V I+AFD+LY NG+ LL ++L+ RR L + F+ F FA +
Sbjct: 532 DVKAEDITVRVHIFAFDLLYLNGESLLAKELKERRRLLQEHFQPVESEFAFAKSSDGSTS 591
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDA-TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+EIQ FL+ +V CEGL++K + +A TYEPS+RS+NWLKLKKDY+ +GDSLDLV +
Sbjct: 592 EEIQAFLEESVKDGCEGLMVKMLTSEASTYEPSRRSMNWLKLKKDYLSGVGDSLDLVVVG 651
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
A+HG+GKRT VYGAFLLACYD ++E +Q+ICKIGTGFSE +L + L+ + R
Sbjct: 652 AYHGKGKRTAVYGAFLLACYDPDSEHYQTICKIGTGFSEEILTKFYELLKPLELGVVRGD 711
Query: 716 YRFADTISPDVWFEP 730
PDVWFEP
Sbjct: 712 IEVGGA-KPDVWFEP 725
>gi|388579226|gb|EIM19552.1| ATP-dependent DNA ligase [Wallemia sebi CBS 633.66]
Length = 643
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 266/547 (48%), Positives = 364/547 (66%), Gaps = 13/547 (2%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
+ + F L+ F I T R+ ITD + + V+ T PE+L+ +YL N++ P +EG
Sbjct: 45 DTITFAQLTDTFTKIEATTKRLEITDYLTQFYKQVILTKPEELLMTLYLTINRLCPDYEG 104
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
LELGIG++ +IKA+ E+ GRT + VK++ +++GDLG VA+++R +Q M K L + V
Sbjct: 105 LELGIGESILIKAVVESTGRTTAKVKEELKKVGDLGTVAQSARKNQPTMFKSKDLNVPTV 164
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVA--ATDCEPQYLIRLLQSKLRIGLAEQTLLAA 366
F + IA +G SQ KK I +L + + E ++LIRLL+ KLRIGLAE+T++ +
Sbjct: 165 FKNLKEIATASGSQSQTKKIGIIMKMLTSCNSNTNEVKFLIRLLEGKLRIGLAEKTVVVS 224
Query: 367 LGQAAVY--NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
L A V NE +K LE +IVKQV+S LP Y+ I+PALL GV NL C
Sbjct: 225 LANAIVLSNNEDATK------EDLERGVEIVKQVYSELPSYDLIIPALLDGGVDNLQERC 278
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
TPGIP+ PMLAKPTK V+E++++F+ FTCEYKYDGERAQIHY DG V+++SRN+E
Sbjct: 279 HLTPGIPLKPMLAKPTKAVTEVLDRFEGRSFTCEYKYDGERAQIHY-HDGKVKVFSRNSE 337
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
+ K+PD+V + R KP V++FV+D E VA+D++ +KILPFQ L+ R RK+V + DI
Sbjct: 338 DMSMKYPDLVEQLPRAIKPGVKNFVIDSEAVAFDKQTKKILPFQELTRRKRKDVKVEDIT 397
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
V V I+AFD+LY N +PLL E L RRE L D+FE F A ++ + +EIQ FL+
Sbjct: 398 VKVHIFAFDLLYFNDKPLLHEDLTRRREMLSDNFETVEDEFAMAKSMEAQSTEEIQAFLE 457
Query: 605 AAVDASCEGLIIK-TMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
+V SCEGL++K A Y PSKRS+NWLKLKKDY+ +GDSLDLV I ++G+GKR
Sbjct: 458 ESVKDSCEGLMVKMNQGESAWYTPSKRSMNWLKLKKDYLSGVGDSLDLVVIGGYYGKGKR 517
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTIS 723
T VYGA+LLACYD ++E +QSICKIGTGFSE ML+ L I P+ YY+ +
Sbjct: 518 TNVYGAYLLACYDQDSESYQSICKIGTGFSEEMLDSHYKLLNPLEITAPKSYYKLG-SAK 576
Query: 724 PDVWFEP 730
PDV+FEP
Sbjct: 577 PDVYFEP 583
>gi|392597419|gb|EIW86741.1| ATP-dependent DNA ligase [Coniophora puteana RWD-64-598 SS2]
Length = 834
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 265/558 (47%), Positives = 371/558 (66%), Gaps = 10/558 (1%)
Query: 182 VACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE----DLVPVVYL 237
V W+ GE VP+ L+ F MI T R+ T I+ V++ + + L+ VYL
Sbjct: 197 VKSWKVGEPVPYAALAHAFSMIEATTKRLEKTHILTTFFLLVIQRSAKGDTNSLLQTVYL 256
Query: 238 AANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM 297
N+++P + G+ELGIG++ +IKA++E+ GR+ + VK ++ GDLGLVA S++SQ +
Sbjct: 257 CINRLSPDYIGIELGIGESLLIKAISESTGRSLATVKADLKKEGDLGLVALNSKNSQKTL 316
Query: 298 RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIG 357
KP PLT+ VF + IA G SQ KK + I LL A D E +Y+IR L+ KLRIG
Sbjct: 317 FKPKPLTLPFVFSKLKEIALSTGHSSQSKKVSIITKLLAACQDVEAKYIIRSLEGKLRIG 376
Query: 358 LAEQTLLAALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL 413
AE+T+L AL AAV E+ + LEE I+K V+S LP Y+ ++PALL
Sbjct: 377 NAERTVLVALAHAAVLAEKEQAGKKWSSEKLTGRLEEGTHIMKSVYSELPTYDLVIPALL 436
Query: 414 TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
DG+ L C TPG+P+ PMLAKPTK + E++++F++ FTCEYKYDGERAQ+H LED
Sbjct: 437 EDGIDKLKEKCKLTPGVPLKPMLAKPTKAIGEVLDRFENKRFTCEYKYDGERAQVHKLED 496
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
G+V ++SRN+E + K+PD+V + KP+ ++FVLD E VA ++ K++PFQ LS R
Sbjct: 497 GTVAVFSRNSEDMSKKYPDLVEQLPHCIKPTTKTFVLDAEAVAIEKATGKLMPFQELSRR 556
Query: 534 ARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
RK+V + DI+V VC++AFD+LY NG+PL+Q+ L RRE L + F+ PG F FA +
Sbjct: 557 KRKDVKIEDIQVRVCLFAFDLLYLNGEPLMQKSLGERRELLREHFQVVPGEFDFAKSSDG 616
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLV 652
DEIQ FL+ +V CEGL++K ++ DA+ YEPS+RS+NWLKLKKDY+ +GDSLDLV
Sbjct: 617 ETTDEIQTFLEESVKDGCEGLMVKMLETDASYYEPSRRSVNWLKLKKDYLAGVGDSLDLV 676
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKP 712
+ ++G+GKRT VYGAFLLACYD++ EE+Q+ICKIGTGFSE L++ +LR + K
Sbjct: 677 VVGGYYGKGKRTNVYGAFLLACYDADAEEYQTICKIGTGFSEEALQQHWDTLRPLEMEKL 736
Query: 713 RPYYRFADTISPDVWFEP 730
R + A PD+WFEP
Sbjct: 737 RGDLK-AGGAKPDIWFEP 753
>gi|402217987|gb|EJT98065.1| ATP-dependent DNA ligase [Dacryopinax sp. DJM-731 SS1]
Length = 846
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 260/550 (47%), Positives = 361/550 (65%), Gaps = 4/550 (0%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ E VP+ L F +I + + RI IT + V+ +P++L+ VYL N++ P
Sbjct: 216 WQADEPVPYAALISTFTLIESTSKRIEITTHLTAFFFMVIRLSPKELLKTVYLCINRLCP 275
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ GLELG+G++ + KA+AE+ GR+ + +K ++ GDLGLVA SR++Q M KP PLT
Sbjct: 276 DYVGLELGVGESILEKAIAESTGRSLAKIKADLKKEGDLGLVAMMSRNTQPTMFKPKPLT 335
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
++ VF IA+ +G SQ KK IK+LL + + EP+++IR L+ KLRI LAE+T+L
Sbjct: 336 VSSVFAKLTEIARVSGNASQAKKIGIIKSLLATSVEMEPKFIIRSLEGKLRIRLAERTVL 395
Query: 365 AALGQAAVYNEQHSK--PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
A+ A V ++ SK + S LEE A IVK V+S LP Y+ ++PALL G+ L
Sbjct: 396 VAVAWATVLRDRGSKKWSKEKLASELEEGANIVKSVYSELPSYDCVIPALLDCGISGLRE 455
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
C TPGIP+ PMLAKPTK + E++++F+ FTCEYKYDGERAQIH EDG+++I+SRN
Sbjct: 456 HCKLTPGIPLKPMLAKPTKAIGEVLDRFEGKTFTCEYKYDGERAQIHQSEDGTIKIFSRN 515
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
+E + K+PD++ + SFVLD E VA +R +LPFQ LS R RK+V D
Sbjct: 516 SEDMSLKYPDLIDQLPGCINEGTSSFVLDAEAVAIERATMNLLPFQELSRRKRKDVRAED 575
Query: 543 IKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
++V VC++AFD+LY NG+PLL + L RR+ LY F PG F FA + +EIQ F
Sbjct: 576 VQVTVCLFAFDLLYLNGEPLLHKDLLSRRQLLYQHFHPVPGEFDFANSSDGSSTEEIQTF 635
Query: 603 LDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
LD +V CEGL++K + DA+ YEPS+RS+NWLKLKKDY+ +GDS DLV + A+HG G
Sbjct: 636 LDQSVKDGCEGLMVKMLQSDASYYEPSRRSVNWLKLKKDYLTGVGDSFDLVVVGAYHGHG 695
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT 721
KRT VYGAFLLACYDS++E+FQ+ICKIGTGF++ L + ++L+ + R
Sbjct: 696 KRTAVYGAFLLACYDSDSEQFQTICKIGTGFTDDALLQHHNTLKGLEVDVMRSDIAPGQA 755
Query: 722 ISPDVWFEPT 731
PDVWF PT
Sbjct: 756 -KPDVWFTPT 764
>gi|389742332|gb|EIM83519.1| ATP-dependent DNA ligase [Stereum hirsutum FP-91666 SS1]
Length = 934
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 266/562 (47%), Positives = 375/562 (66%), Gaps = 10/562 (1%)
Query: 178 DPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVME-TTPED---LVP 233
D + W+ GE VP+ L+ F +I T R+ T ++ +L V++ + P D L+
Sbjct: 293 DVDVTGGWKDGEPVPYAALAKTFALIEATTKRLEKTSLLTALLLLVIQRSKPGDSNSLLQ 352
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS 293
+YL N+++P + G+ELGIG++ +IKA+ E+ GR + +K + ++ GDLGLVA S++
Sbjct: 353 TIYLCINRLSPDYIGIELGIGESILIKAIGESTGRNLNTIKAELKKEGDLGLVAMNSKNM 412
Query: 294 QSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSK 353
Q + KP PLT + VF + IA G SQ KK N I LL A E +Y++R L+ K
Sbjct: 413 QKTLFKPKPLTASFVFTNLKEIALSTGHSSQNKKINIITKLLAACLGQEAKYIVRSLEGK 472
Query: 354 LRIGLAEQTLLAALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
LRIG AE+T+L AL AAV EQ P + + LE+ A I+K V+S LP Y+K++
Sbjct: 473 LRIGNAERTVLVALAHAAVLAEQEKSGKKWSPDKLATRLEQGASIIKSVYSELPNYDKVI 532
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PALLTDG+ L+ TC TPG+P+ PMLAKPTK + E++++F+ FTCEYKYDGERAQ+H
Sbjct: 533 PALLTDGLDRLTETCKLTPGVPLKPMLAKPTKAIGEVLDRFEGKRFTCEYKYDGERAQVH 592
Query: 470 YLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQT 529
L+DGS+ ++SRN+E + K+PD+V + K + +SFVLD E VA DR+ K++PFQ
Sbjct: 593 MLDDGSINVFSRNSEDMSKKYPDLVEQLPHCVKEATKSFVLDTEAVAIDRQTGKLMPFQE 652
Query: 530 LSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT 589
LS R RK+V + DI+V VC++AFD+LY NG+PLL + L RRE L F+ G F FA
Sbjct: 653 LSKRKRKDVKVEDIQVRVCLFAFDLLYLNGEPLLHKPLAERRELLRKHFQSVEGEFDFAK 712
Query: 590 TLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDS 648
++ + ++EIQ FLD +V CEGL++K M+ +A+ YEPS+RS+NWLKLKKDY+ +GDS
Sbjct: 713 SMDNESVEEIQTFLDVSVKDGCEGLMVKMMESEASHYEPSRRSVNWLKLKKDYLAGVGDS 772
Query: 649 LDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
LDLV + ++G+GKRT YGAFLLACYDS++EEFQ+ICKIGTGFSE L +L+
Sbjct: 773 LDLVVVGGYYGKGKRTNFYGAFLLACYDSDSEEFQTICKIGTGFSEEALASHYEALKPLE 832
Query: 709 IPKPRPYYRFADTISPDVWFEP 730
+ K R + PD+WFEP
Sbjct: 833 MEKHRGDIKPGGA-KPDIWFEP 853
>gi|426244015|ref|XP_004015832.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1 [Ovis aries]
Length = 893
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 293/697 (42%), Positives = 418/697 (59%), Gaps = 57/697 (8%)
Query: 88 KRRTLDTQTPKTTNSVV----GE--------KIQEVAEEPSNDLVKPISNQIDNPIDSEK 135
KRRT Q PK T V GE K +E AE P+ L +P + + E
Sbjct: 121 KRRTARKQLPKRTFQDVLKEQGEDEDPETKKKKEEGAETPTESLPEPEGGDKE---EVEG 177
Query: 136 ESQPT-PPSPKK------RKVNVNSVSAKEKIAE-----------------LKSNIVLLK 171
QPT PP P+ V+ V+ K++ E +K
Sbjct: 178 RDQPTTPPEPQTSTESPTESVSEPGVTVKQEPQEDGQAQPPPKAPKTLSSFFSPRKPAVK 237
Query: 172 KKAGEFDPKMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPED 230
K+A E P + E KG VP++ ++ F+ I + R+ + + + N+LR+V+ +P D
Sbjct: 238 KEAKEGGPGALRKDETKG--VPYLAVARAFEKIEEVSARLRMVETLSNLLRSVVALSPAD 295
Query: 231 LVPVVYLAANKIAPAHEGLELGIGDASII-KALAEACGRTESHVKKQYQEMGDLGLVAKA 289
L+PV+ N++ P +GLELGIG+ I+ KA+A+A GR V+ + E GD+GLVA++
Sbjct: 296 LLPVLQPPLNRLGPPQQGLELGIGEEGILLKAVAQATGRQLESVRAEVAEKGDVGLVAES 355
Query: 290 SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRL 349
SRS+Q ++ P LT VF FR IA+ AG S KK + IK L VA E +++ R
Sbjct: 356 SRSTQRLVLPPPALTAGGVFAKFRDIAQLAGSASTTKKMDVIKGLFVACRHSEARFIARX 415
Query: 350 LQSKLRIG--LAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIV 395
+R G A +LL + + PP + ++ LEE I+
Sbjct: 416 GCGPVRWGGGRAGASLLVPXPSSDGSTPPARECPPVVVDAGKGKTAEARKTWLEEQGMIL 475
Query: 396 KQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEF 455
KQ F +P ++IVP LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++ F
Sbjct: 476 KQTFCEVPDLDRIVPVLLEHGLERLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEAAF 535
Query: 456 TCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIV 515
TCEYKYDG+RAQIH LE G V+I+SRN E NTG++PD++ + ++K PSV SF+LD E V
Sbjct: 536 TCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGRYPDIISRIPKIKLPSVTSFILDTEAV 595
Query: 516 AYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLY 575
A+DREK++I PFQ L+TR RK V ++I+V VC+YAFD++Y NG+ L++E L RR+ L
Sbjct: 596 AWDREKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLR 655
Query: 576 DSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWL 635
++F E G F FAT+L + D ++I +FL+ +V SCEGL++KT+D DATYE +KRS NWL
Sbjct: 656 ENFVETEGEFVFATSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWL 715
Query: 636 KLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEA 695
KLKKDY+E +GD+LDLV I A+ G+GKR G YG FLLA YD +EEFQ+ICK+GTGFS+
Sbjct: 716 KLKKDYLEGVGDTLDLVVIGAYLGKGKRAGRYGGFLLASYDEESEEFQAICKLGTGFSDE 775
Query: 696 MLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
LEE L++ V+P PR Y R ++PD W +P++
Sbjct: 776 ELEEHHQRLQALVLPTPRSYVRADGAVAPDHWLDPSD 812
>gi|195586207|ref|XP_002082869.1| GD11806 [Drosophila simulans]
gi|194194878|gb|EDX08454.1| GD11806 [Drosophila simulans]
Length = 713
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 276/674 (40%), Positives = 406/674 (60%), Gaps = 51/674 (7%)
Query: 78 NSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDNPIDSEKES 137
+++ S S PKK +D +T + E A + V+P+S +DSE+++
Sbjct: 14 DATDSPSPPKKVPKIDAKTELPDEPHIK---SESASPETKPKVEPMS------VDSEEKT 64
Query: 138 QPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGE--------FDPKMVACWEKGE 189
P K+ K V+ + K K+ + N K+ E + P A W+ +
Sbjct: 65 SPVKNVKKEPKDTVDKTTDK-KVTTIGLNSTSASKEDAENYDPSADSYHPLKNAYWKDKK 123
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
P++ L+ F +I GR+ + D + N +VM +PEDLVP VYL+ N++APA+EG+
Sbjct: 124 VTPYLALARTFQVIEETKGRLKMIDTLSNFFCSVMLVSPEDLVPSVYLSINQLAPAYEGM 183
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+ + +++KA+ +A GR +H+K Q +GDLG+VA+ SR SQ MM +P PL + VF
Sbjct: 184 ELGVAETTLMKAICKATGRNLAHIKSQTHLIGDLGIVAEQSRVSQRMMFQPAPLNVRDVF 243
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK +G + K + + + VA E ++ IR L KLRIG+ Q
Sbjct: 244 RKLREIAKISG----QSKMDMVYNMFVACRLSEARFFIRSLIGKLRIGM----------Q 289
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
+ V +++ P Q P Y+ I+PA+L + L C PG
Sbjct: 290 SRVCSQRW---PLGCQCP----------------NYDIIIPAILKYDIKELQERCPMHPG 330
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
+P+ PMLA+PTKGV E+ +F M+ TCE+KYDGERAQIH E G + I+SRN+E NT K
Sbjct: 331 MPLRPMLAQPTKGVHEVFERFGGMQITCEWKYDGERAQIHRNEKGEISIFSRNSENNTAK 390
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PD++ + L K V+S+++D EIVA+D E+++ILPFQ LSTR RKNV + +IKV VC+
Sbjct: 391 YPDLIARSTGLLKGDVKSYIIDSEIVAWDVERKQILPFQVLSTRKRKNVDIEEIKVQVCV 450
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
Y FD+LY NG L+ + L RR+ L + F+E G ++FAT L + D+DE+Q+FL+ ++
Sbjct: 451 YIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLEESIKG 510
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
+CEGL++KT+D +ATYE +KRS NWLKLKKDY+ ++GDSLDLV I + G+G+RTG YG
Sbjct: 511 NCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGG 570
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
FLLACYD+ NEE+QSICKIGTGF++ L+ S L V + YYR+ ++ PD WFE
Sbjct: 571 FLLACYDTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYRYDPSLEPDHWFE 630
Query: 730 PTERPETSNSPASI 743
P + E + S+
Sbjct: 631 PVQVWEVKCADLSL 644
>gi|58270892|ref|XP_572602.1| DNA ligase [Cryptococcus neoformans var. neoformans JEC21]
gi|134115296|ref|XP_773946.1| hypothetical protein CNBH3980 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256574|gb|EAL19299.1| hypothetical protein CNBH3980 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228861|gb|AAW45295.1| DNA ligase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 803
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 264/555 (47%), Positives = 362/555 (65%), Gaps = 10/555 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVME-TTPED-----LVPVVYLA 238
W+ GE VP+ L F+ I T R+ I + + L V + T D L+ VVYL
Sbjct: 172 WKDGEAVPYPALVSTFEKIEATTKRLEILEFLTQFLLVVAKRDTATDAKGSMLLKVVYLC 231
Query: 239 ANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMR 298
N++ P + G+ELGIG++ +IKA+AE+ GR +K+ ++ GDLG VA SR++QS M
Sbjct: 232 INRLCPDYMGIELGIGESLLIKAIAESTGRAMPKIKEDLKKEGDLGKVAMNSRNTQSTMF 291
Query: 299 KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGL 358
KP PLT+ VF IAK +G SQ KK IK LL A E +++IR L+ KLRIGL
Sbjct: 292 KPKPLTVPYVFQCLTDIAKASGNASQAKKVGIIKKLLAACQGTEAKFIIRSLEGKLRIGL 351
Query: 359 AEQTLLAALGQAAVYNEQHSKPPP--NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
A++T++ AL A V K PP + LE+ A+ VK V+S LP Y+ ++PALL G
Sbjct: 352 ADKTVVVALAHAIVLKTIGDKKPPPEKLAIMLEQGAETVKAVYSELPSYDLVIPALLQGG 411
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
V L C TPG+P+ PMLAKPTK ++E++++F+ EFTCEYKYDGERAQ+H LEDG++
Sbjct: 412 VEGLRERCKLTPGVPLKPMLAKPTKAITEVLDRFEGKEFTCEYKYDGERAQVHLLEDGTI 471
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
++SRN+E + K+PD+V + R KP+ ++FV+D E VAYD E +KILPFQ LS R RK
Sbjct: 472 SVFSRNSENMSAKYPDLVDQIPRSMKPTAKTFVIDAEAVAYDLETKKILPFQDLSRRKRK 531
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+V DI V V I+AFD+LY NG+ LL ++L+ RR+ L + F+ F FA +
Sbjct: 532 DVKAEDITVRVHIFAFDLLYLNGESLLAKELKERRQLLQEHFQPVESEFAFAKSSDGSTT 591
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRD-ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+EIQ L+ +V CEGL++K + + +TYEPS+RS+NWLKLKKDY+ +GDSLDLV +
Sbjct: 592 EEIQALLEESVKDGCEGLMVKMLTSESSTYEPSRRSMNWLKLKKDYLSGVGDSLDLVVVG 651
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
A+HG+GKRT VYGAFLLACYD ++E +Q+ICKIGTGFSE +L + L+ + R
Sbjct: 652 AYHGKGKRTAVYGAFLLACYDPDSEHYQTICKIGTGFSEEILTQFYELLKPLELEVVRGD 711
Query: 716 YRFADTISPDVWFEP 730
PDVWFEP
Sbjct: 712 IEVGGA-KPDVWFEP 725
>gi|401843019|gb|EJT44979.1| CDC9-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 755
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/546 (45%), Positives = 363/546 (66%), Gaps = 5/546 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ + VF+ I + R+ I I + +M + ++L+P YL N++ P +E
Sbjct: 146 IPYSEVCEVFNKIEAISSRLEIIRICSDFFIKIMNQSSKNLIPTTYLFINRLGPDYEAGL 205
Query: 251 LGIGDASI-IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
++ +K ++E+CG++ S +K +Y+EMGDLG +A +R+ Q M KP LT+ +VF
Sbjct: 206 ELGLGENLLMKTISESCGKSMSQIKLKYKEMGDLGEIAMGARNVQPTMFKPKALTVGEVF 265
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK GKDSQ +K IK +L A E ++LIR L+SKLRIGLAE+T+L +L +
Sbjct: 266 KNLRTIAKTQGKDSQLRKMKLIKRMLTACQGVEAKFLIRSLESKLRIGLAEKTVLISLSK 325
Query: 370 AAVYNEQHSKPPPNIQSP---LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF 426
A + ++++ + P+ + P LE A + ++ F +P YE ++ + L G+ NL C+
Sbjct: 326 ALLLHDENKENSPDKEIPMDVLESAQQRIRDAFCQVPNYEIVINSCLNHGIMNLDKYCTL 385
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERN 486
PGIP+ PMLAKPTK ++E++++FQ FT EYKYDGERAQ+H L DG++ IYSRN E
Sbjct: 386 RPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTMRIYSRNGENM 445
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
T ++P++ + S ++ +LDCE VA+D+E++KILPFQ LSTR RK+V L D+KV
Sbjct: 446 TERYPEIKITDFIQDLNSTKNLILDCEAVAWDKEQKKILPFQILSTRKRKDVELHDVKVK 505
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFDIL N + L+ + LR RREHL + PG FQ+AT + + +LDE+QKFLD +
Sbjct: 506 VCLFAFDILCYNDERLINKSLRERREHLAKVTKVVPGEFQYATQIITNNLDELQKFLDES 565
Query: 607 VDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
V+ SCEGL++K +D ++ YEPSKRS NWLKLKKDY+E +GDSLDL + A++GRGKRTG
Sbjct: 566 VNNSCEGLMVKMLDGPESHYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYYGRGKRTG 625
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
YG FLL CY+ + EF++ CKIGTGFS+ ML+ L +I P+ + F + PD
Sbjct: 626 TYGGFLLGCYNQDTGEFETCCKIGTGFSDEMLQLLHERLTPTIIDGPKATFVFDASAEPD 685
Query: 726 VWFEPT 731
VWFEPT
Sbjct: 686 VWFEPT 691
>gi|367050816|ref|XP_003655787.1| hypothetical protein THITE_43396 [Thielavia terrestris NRRL 8126]
gi|347003051|gb|AEO69451.1| hypothetical protein THITE_43396 [Thielavia terrestris NRRL 8126]
Length = 749
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 271/583 (46%), Positives = 375/583 (64%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F +I T R+ I LR VM TP+DL+P V L NK+AP
Sbjct: 85 WKAGEPVPYAALCKTFSLIELTTKRLEILAHCSLFLRQVMRLTPDDLLPTVLLMVNKLAP 144
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ + +K+ +E+GDLGLVA SRS+Q M KP PLT
Sbjct: 145 DYAGIELGIGESLIMKAIGETTGRSLAVIKQDQKEIGDLGLVAVKSRSTQPTMFKPKPLT 204
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
+ V IA G +Q +K + IK LL AA E +Y+IR
Sbjct: 205 VRGVHKGLMAIATVTGNGAQGRKVDGIKKLLSAADANSTGKVDITKDKGGPSEAKYIIRF 264
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
L+ KLR+GLAE+T++ AL QA V +E K S +E+ I+K V+S LP Y+ I+
Sbjct: 265 LEGKLRLGLAEKTVIVALAQAVVAHEAARKGKVPSTSDIEKGESILKAVYSELPSYDVII 324
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PA++ G+ NL C PG+P+ PMLAKPTK ++E++++F+ FTCEYKYDGERAQIH
Sbjct: 325 PAMVEHGILNLKEHCKLRPGVPLKPMLAKPTKAITEVLDRFEGQTFTCEYKYDGERAQIH 384
Query: 470 YLED-------------------GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
Y+ G I+SRN+E + K+PDV+ + K +SFVL
Sbjct: 385 YVAKDTDEELSQSASGASKEVGRGVAAIFSRNSEDLSKKYPDVLAKLPTWVKEDTKSFVL 444
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D +++K+LPFQ L TR +K+V + D+KV VC++AFD+LY NG+P++++ LR R
Sbjct: 445 DCESVAWDVKEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLYLNGKPVVEKPLRER 504
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSK 629
RE L+ +F+ G F FAT + +LDEIQ FLD +V ASCEGL++K +D ++ YEPSK
Sbjct: 505 RELLHQAFQPVEGEFAFATFMNGQELDEIQSFLDESVKASCEGLMVKMLDGEESGYEPSK 564
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ +GDSLDLV + A++G+GKRT VYGAFLLACY+ + ++++C IG
Sbjct: 565 RSRNWLKIKKDYLSGVGDSLDLVVLGAYYGKGKRTSVYGAFLLACYNPGTDTYETVCNIG 624
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
TGFSEA+LEE SL VI +P+P+Y + PDVWFEP
Sbjct: 625 TGFSEAVLEELHDSLSQIVIDRPKPFYSHSSVGQHQPDVWFEP 667
>gi|344232319|gb|EGV64198.1| ATP-dependent DNA ligase [Candida tenuis ATCC 10573]
Length = 715
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 268/554 (48%), Positives = 371/554 (66%), Gaps = 16/554 (2%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNM-LRTVMETTPEDLVPVVYLAANKIAPAHE- 247
++P+ L+ VF+ I E+GR+ + I+ L + ++T + LV +VYL+ N++ P +E
Sbjct: 102 KLPYSKLTSVFEEIEAESGRLKMISIISEFYLEVLQQSTVDKLVKIVYLSINRLGPDYEP 161
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITK 307
LELG+G+ +IKA++E GR S +K+ Y+ GDLGLVA+ SRS Q M KP PL +
Sbjct: 162 DLELGLGETLLIKAISECYGRASSKIKQDYKTFGDLGLVAQQSRSGQPTMFKPTPLDVDL 221
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAA--TDCEPQYLIRLLQSKLRIGLAEQTLLA 365
VFD+ IAK GKDSQ KK I LL A E ++LIR L+ KLRIGLAE+T+L
Sbjct: 222 VFDSLTKIAKSTGKDSQMKKVGLINKLLTACERKTTEAKFLIRSLEGKLRIGLAEKTVLI 281
Query: 366 ALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCS 425
L QA E H+ P NI +A I+++ FS++P YE I+ G++NL +
Sbjct: 282 GLAQAFTNYENHAMTPENIT----KAEDIIRESFSLIPNYEIIIKTAYEHGIFNLLDHIH 337
Query: 426 FTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAER 485
TPGIP+ PMLAKPTK +SE++++FQ EFTCEYKYDGERAQ+H L DGSV IYSRN+E
Sbjct: 338 LTPGIPLKPMLAKPTKSISEVLDRFQGEEFTCEYKYDGERAQVHLLSDGSVRIYSRNSED 397
Query: 486 NTGKFPDVVLAVSRLKKPS-------VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+ ++PD++ + K ++S +LDCE VA+DR+ KILPFQ LSTR RK+V
Sbjct: 398 MSQRYPDLIAIIKDFIKVQEDSDGTPIKSLILDCEAVAWDRQLNKILPFQVLSTRKRKDV 457
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
+ DIKV +C++AFDILY NG+ ++ + L RRE +Y++ + G F FAT+ S +LDE
Sbjct: 458 NEKDIKVHICLFAFDILYLNGESVVNKTLAERRELMYENLKPIEGKFCFATSRNSSNLDE 517
Query: 599 IQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAF 657
+Q FLD +V SCEGL++K ++ +++ YEPSKRS NWLKLKKDY+ +GDSLDLV + A+
Sbjct: 518 LQIFLDQSVKDSCEGLMVKMLNSKESYYEPSKRSRNWLKLKKDYLAGVGDSLDLVVVGAY 577
Query: 658 HGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYR 717
+GRGKRTG YG FLLA Y+ + EF++ CKIGTGFS+ L +SL I +P+ Y
Sbjct: 578 NGRGKRTGNYGGFLLASYNDDTGEFETTCKIGTGFSDEDLTSLYNSLHPTEISQPKGSYV 637
Query: 718 FADTISPDVWFEPT 731
+ + PDVWFEPT
Sbjct: 638 YDPSAVPDVWFEPT 651
>gi|384491447|gb|EIE82643.1| hypothetical protein RO3G_07348 [Rhizopus delemar RA 99-880]
Length = 726
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/575 (44%), Positives = 371/575 (64%), Gaps = 41/575 (7%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ L F+ N T R+ IT+ + + K+ P +EGLE
Sbjct: 109 IPYAVLCKTFEKCENTTKRLEITEYLVTLF-------------------GKLCPDYEGLE 149
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
LGIG++ +IKA+AE+ GR+ +K +Y ++GDLG +AK S+ SQS + KP PLT+ VF
Sbjct: 150 LGIGESLLIKAIAESTGRSIKQIKTEYAKIGDLGTIAKESKGSQSTLFKPKPLTVPHVFR 209
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
+ +A G +Q KK ++IK LLVA + E +Y+IR L+ KLRIGLAEQT+L+AL Q+
Sbjct: 210 VLKEVANITGNSAQSKKIDKIKGLLVACQENEAKYIIRQLEGKLRIGLAEQTVLSALAQS 269
Query: 371 AVYNEQHSKPPPNIQSP--LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
+ ++ +S + L A + VK V++ LP Y+ IVPALL + L + CS P
Sbjct: 270 VMLSKLNSSKVSTTKKEELLASAVETVKYVYNQLPCYDDIVPALLKYPIEELIDHCSMHP 329
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
G+P+ PMLA PTK ++E++++F+ FTCE+KYDGERAQIH L DGS+ +YSRN+E +
Sbjct: 330 GVPLKPMLAHPTKSLTEVLDRFEGQTFTCEFKYDGERAQIHKLADGSIHVYSRNSENMSI 389
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVC 548
++PD++ A+ + KP+ +F+LDCE VA+D+E +KILPFQ LSTR RK+V +IKV V
Sbjct: 390 RYPDIMNAIQKWLKPTTETFILDCEAVAWDKEAKKILPFQVLSTRKRKDVKEEEIKVRVA 449
Query: 549 IYAFDILYRNG------------------QPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
++AFD LY NG + LLQE L +RR+ L ++F E F FA
Sbjct: 450 VFAFDCLYLNGKVSQILLHNRLFFVTLFFKSLLQESLEIRRQKLQEAFTETEHEFYFAKH 509
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTM-DRDATYEPSKRSLNWLKLKKDYIESIGDSL 649
+ S ++++IQ FLD +V +CEGL++K+ ++ATYEPSKRS NWLK+KKDY+ +GDS+
Sbjct: 510 MDSNNIEDIQTFLDVSVGNNCEGLMVKSFSSKEATYEPSKRSRNWLKVKKDYLNGVGDSM 569
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
DLV I A++GRGKRT VYGAFLLACYD EE+Q+ICK+GTGFS+ L+ ++L+ VI
Sbjct: 570 DLVVIGAYYGRGKRTSVYGAFLLACYDPETEEYQTICKLGTGFSDENLQLFYNTLKDHVI 629
Query: 710 PKPRPYYRFADT-ISPDVWFEPTERPETSNSPASI 743
P+ +Y D PD+WF+P + E + S+
Sbjct: 630 NDPKRFYCLGDNPPKPDIWFDPVQVWEVKCADLSL 664
>gi|302656594|ref|XP_003020049.1| hypothetical protein TRV_05913 [Trichophyton verrucosum HKI 0517]
gi|291183829|gb|EFE39425.1| hypothetical protein TRV_05913 [Trichophyton verrucosum HKI 0517]
Length = 908
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/608 (44%), Positives = 368/608 (60%), Gaps = 64/608 (10%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F I T R++I LR V+ TP+DL+ V L NK+A
Sbjct: 217 WKAGDPVPYAALCTTFSHIEMTTKRLIILSHCALFLRQVLRLTPDDLLSTVQLMINKLAA 276
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP LT
Sbjct: 277 DYAGIELGIGESLIMKAIGESTGRSLAVIKADQNEIGDLGLVAAKSRSNQPTMFKPKALT 336
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-------------------TDCEPQY 345
+ V + IAK G SQEKK IK LL AA E ++
Sbjct: 337 VRGVHEGLLAIAKTHGTGSQEKKIAGIKKLLSAADADKAGKGSKTIDITKNRGGASEAKF 396
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH---SKPPPNIQSPLEEAAKIVKQVF--- 399
++R L+ KLR+GLAE+T+L AL A V +E KPP Q L + I+K V+
Sbjct: 397 IVRFLEGKLRLGLAERTVLVALAHAMVAHEAEMDGGKPPSTDQ--LAKGEDILKTVYRYA 454
Query: 400 ----------------SVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
S LP YE I+PA+L G++NL + C PG+P+ PMLAKPTK +
Sbjct: 455 PLLNIFGGISELILCDSELPSYEVIIPAMLKHGIFNLPDNCKLQPGVPLKPMLAKPTKSI 514
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLE------------------DGSVEIYSRNAER 485
SE++++F+ FTCEYKYDGERAQIHY+ +G I+SRN+E
Sbjct: 515 SEVLDRFEGKHFTCEYKYDGERAQIHYISRDTIKEYPAASTTLQKDGEGLCAIFSRNSED 574
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV 545
+ K+PD++ + KP +SFV+DCE VA+D +K+LPFQ L TR RK+V DIKV
Sbjct: 575 LSKKYPDILEKLEAWVKPGTQSFVVDCETVAWDTVNKKVLPFQQLMTRKRKDVKSEDIKV 634
Query: 546 DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDA 605
VC++AFD+L+ NG+P +++ LR RR L+++F G F FA + DL+EIQ LD
Sbjct: 635 KVCVFAFDLLFLNGEPTVKKTLRERRALLHEAFVPVEGEFAFAQHGNTSDLEEIQTMLDE 694
Query: 606 AVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
+V ASCEGL++K +D D+ YEPSKRS NWLK+KKDY+ IGDSLDLV + A+ GRGKRT
Sbjct: 695 SVKASCEGLMVKMLDTEDSGYEPSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYFGRGKRT 754
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--I 722
VYGAFLLA Y+ + +++IC IGTGFSEA+LEE +L VI KP+P+Y +
Sbjct: 755 SVYGAFLLAAYNPKTQNYETICNIGTGFSEALLEELHETLSPLVIDKPKPFYSHSTVPKD 814
Query: 723 SPDVWFEP 730
PDVWFEP
Sbjct: 815 QPDVWFEP 822
>gi|85083459|ref|XP_957121.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Neurospora
crassa OR74A]
gi|28918207|gb|EAA27885.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Neurospora
crassa OR74A]
Length = 923
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/584 (45%), Positives = 371/584 (63%), Gaps = 38/584 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F +I R+LI + LR V+ TP+DL+P V L NK+AP
Sbjct: 258 WKAGEPVPYAALCTTFSLIEQTRKRLLIMEYCSLFLRQVLRLTPDDLLPTVLLMINKLAP 317
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ + VK +E+GDLGLVA SRS Q M KP PLT
Sbjct: 318 DYAGIELGIGESLIMKAIGETTGRSIAVVKNDQKEIGDLGLVAVKSRSKQPTMFKPKPLT 377
Query: 305 ITKVFDTFRLIAKE-AGKDSQEKKKNRIKALLVAATD---------------CEPQYLIR 348
I V IA G +Q+KK + IK LL AA E ++++R
Sbjct: 378 IRGVHKGLMDIATTMTGTGAQQKKVDGIKKLLSAADANSTGKVDITKDKGGPSEAKFIVR 437
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ KLR+GLAE++++ +L QA + +E K +S +A I+K V+S LP Y+ I
Sbjct: 438 FLEGKLRLGLAEKSVIVSLAQAMIAHEFAQKGKIPSESDFSKAESILKTVYSELPSYDVI 497
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+PA+L G+ NL C PG+P+ PMLA PTK ++E++++F+ FTCEYKYDGERAQI
Sbjct: 498 IPAMLQHGIMNLREHCKLRPGVPLKPMLANPTKAITEVLDRFEGQTFTCEYKYDGERAQI 557
Query: 469 HYLED-------------------GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
HY+ G I+SRN+E + K+PDV+ + K +SFV
Sbjct: 558 HYVAKDVPKSEGDLSQVASKDTGKGVAAIFSRNSEDLSQKYPDVLAKLPTWVKEGTKSFV 617
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
LDCE VA+D +K+LPFQ L TR +K+V L D+KV VC++AFD+LY NGQ ++++ LR
Sbjct: 618 LDCESVAWDTVDKKVLPFQQLMTRKKKDVKLEDVKVKVCVFAFDLLYLNGQAVVEKSLRE 677
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPS 628
RRE L ++F+ G F FAT++ +LDEIQ FLD +V A CEGL++K +D ++ YEPS
Sbjct: 678 RRELLREAFKPVEGEFAFATSMDGQELDEIQSFLDESVKAGCEGLMVKMLDGAESGYEPS 737
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
KRS NWLK+KKDY+ IGDSLDLV + A+HG+GKRT V+GAFLLACY+ + + ++++C I
Sbjct: 738 KRSRNWLKIKKDYLAGIGDSLDLVVLGAYHGKGKRTSVFGAFLLACYNPSTDTYETVCNI 797
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
GTGFS+ +L+E SSL +I +P+P+Y PDVWFEP
Sbjct: 798 GTGFSDEVLQELHSSLSPIIIDRPKPFYAHSSGGQHQPDVWFEP 841
>gi|46122151|ref|XP_385629.1| hypothetical protein FG05453.1 [Gibberella zeae PH-1]
Length = 867
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 265/583 (45%), Positives = 375/583 (64%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G VP+ L F ++ T R++I + LR VM TP+DL+P V L NK+AP
Sbjct: 203 WQPGTPVPYAALCTTFSLVEMTTKRLIIMEHCSLFLRQVMRLTPDDLLPTVLLMINKLAP 262
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ +K +++GDLGLVA SRS+Q M KP PLT
Sbjct: 263 DYAGIELGIGESLIMKAIGETTGRSLQVIKADQKDIGDLGLVAVKSRSTQRTMFKPKPLT 322
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
+ + IA G +Q +K + IK LL AA E +++IR
Sbjct: 323 VRGIHQGLMNIATVTGNGAQGRKVDGIKKLLAAADANSTGKVDITKDKGGPSEAKFIIRF 382
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
L+ KLR+GLAE+T+L +L QA V +E +K + LE+ I+K V+S LP Y+ I+
Sbjct: 383 LEGKLRLGLAERTVLVSLAQAIVAHEADAKGKAPSTTDLEKGEAILKTVYSELPSYDVII 442
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PA+L G+ NL + C PG+P+ PMLAKPTK ++E++++F+ +FTCEYKYDGERAQIH
Sbjct: 443 PAILEHGIMNLRDNCKLRPGVPLKPMLAKPTKAITEVLDRFEGQKFTCEYKYDGERAQIH 502
Query: 470 YLED-------------------GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
Y+ G I+SRN+E + K+PD++ + KP +SFVL
Sbjct: 503 YVAKDAPQELNEASQGAAKEVAAGVASIFSRNSEDLSRKYPDILAKLHTWVKPDTKSFVL 562
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D +++K+LPFQ L TR +K+V + D+KV VC++AFD+LY NG+ ++++ LR R
Sbjct: 563 DCETVAWDVDEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLYLNGEAVVEKALRER 622
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDAT-YEPSK 629
RE L +F G F FAT + +LDEIQ FLD +V ASCEGL++K +D D + YEPSK
Sbjct: 623 RELLQTAFNPVEGEFAFATHMDGQELDEIQVFLDESVKASCEGLMVKMLDGDESGYEPSK 682
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ +GDSLDLV + A++G+GKRT VYGAFLLACY+ N+E+++++C IG
Sbjct: 683 RSRNWLKIKKDYLSGVGDSLDLVVLGAYYGKGKRTSVYGAFLLACYNPNSEKYETVCNIG 742
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRFAD--TISPDVWFEP 730
TGFSE +LE+ L I +P+P+Y + PDVWFEP
Sbjct: 743 TGFSEQVLEDLHMQLSEITIDRPKPFYSHSSGGQHQPDVWFEP 785
>gi|400601191|gb|EJP68834.1| DNA ligase I [Beauveria bassiana ARSEF 2860]
Length = 856
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/584 (46%), Positives = 381/584 (65%), Gaps = 39/584 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G VP+ L F +I T R++I + LR VM TP+DL+P V L NK+AP
Sbjct: 192 WKPGAPVPYAALCTTFSLIEMTTKRLIIMEHCALFLRQVMRLTPDDLLPTVLLMINKLAP 251
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ +K +++GDLGLVA SRS+Q M KP PLT
Sbjct: 252 DYAGIELGIGESLIMKAIGESTGRSLQVIKADQKDIGDLGLVALKSRSTQPTMFKPKPLT 311
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC----------------EPQYLIR 348
+ V IA +G +Q +K + IK LL +A+D E +Y+IR
Sbjct: 312 VRGVHQGLMGIATVSGNGAQGRKVDGIKKLL-SASDAHNTGKVDITKDKGGASEAKYIIR 370
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ KLR+GLAE+T+L +L QA V +E + S +E+ I+K V+S LP Y+ I
Sbjct: 371 FLEGKLRLGLAEKTVLVSLAQAVVCHEADQRGKVPSTSDMEKGESILKTVYSELPSYDVI 430
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+PA+L+ G+ NL + C PG+P+ PMLAKPTK ++E++++F+ FTCEYKYDGERAQI
Sbjct: 431 IPAMLSHGILNLRDHCKLQPGVPLKPMLAKPTKAITEVLDRFEGQTFTCEYKYDGERAQI 490
Query: 469 HYL-ED------------------GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
HY+ ED G I+SRN+E + K+PD++ + K +SFV
Sbjct: 491 HYVAEDAPQELSQAAPGANKAAAKGVASIFSRNSEDLSKKYPDILAKLHSWVKDDTKSFV 550
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
LDCE VA+D ++ +LPFQ L TR +K+V + D+KV VC++AFD+LY NGQP++++ LR
Sbjct: 551 LDCETVAWDMVEKTVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLYLNGQPVVEKPLRE 610
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPS 628
RRE L +F G F AT++ +LD+IQ FLD +V ASCEGL++K +D ++ YEPS
Sbjct: 611 RRELLRQAFAPVEGEFALATSMDGQELDDIQVFLDESVKASCEGLMVKMLDGTESGYEPS 670
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
KRS NWLK+KKDY+ +GDSLDLV + A++GRGKRT VYGAFLLACY+ N++ ++++C I
Sbjct: 671 KRSRNWLKIKKDYLSGVGDSLDLVVLGAYYGRGKRTSVYGAFLLACYNPNSDTYETVCNI 730
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
GTGFSE +LEE +SL + VI +P+P+Y + PDVWFEP
Sbjct: 731 GTGFSEQVLEELHASLSALVIDRPKPFYAHSAGNQHQPDVWFEP 774
>gi|340905275|gb|EGS17643.1| DNA ligase-like protein [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 863
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/584 (45%), Positives = 381/584 (65%), Gaps = 39/584 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W++GE VP+ L F +I + R+ I LR VM TP+DL+P V L NK+AP
Sbjct: 199 WKEGEPVPYAALCQTFSLIELTSKRLEIMAHCSLFLRQVMRLTPDDLLPTVLLMVNKLAP 258
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ S +K+ +E+GDLGLVA SR++Q M KP PLT
Sbjct: 259 DYAGIELGIGESLIMKAIGETTGRSLSVIKQDQKEIGDLGLVAVKSRATQPTMFKPKPLT 318
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC----------------EPQYLIR 348
+ V IA G +Q+KK + IK LL +A+D E ++L+R
Sbjct: 319 VRGVHKILMDIATVTGNGAQQKKVDFIKKLL-SASDVNMKGKADITKDKGGPSEAKFLVR 377
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ KLR+GLAE+T++ +L QA V +E K + LE+ +I+KQV+S LP Y+ I
Sbjct: 378 FLEGKLRLGLAEKTVIVSLAQAMVAHEAWKKGKVPSTADLEKGEQILKQVYSELPSYDVI 437
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+PA++ G++NL C PG+P+ PMLAKPTK ++E++++F+ FTCEYKYDGERAQI
Sbjct: 438 IPAMVKHGIFNLREHCKLRPGVPLKPMLAKPTKAITEVLDRFEGQTFTCEYKYDGERAQI 497
Query: 469 HYLED-------------------GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
HY+ G I+SRN+E + K+PDV+ + K +SFV
Sbjct: 498 HYVAKDTGEALSQSASGASKEVGKGVAAIFSRNSEDLSKKYPDVLAKLPTWVKEDTKSFV 557
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
LDCE VA+D ++K+LPFQTL TR +K+V + D+KV VC++AFD+LY NG+ ++ + LR
Sbjct: 558 LDCESVAWDVNEKKVLPFQTLMTRKKKDVKVEDVKVKVCVFAFDLLYLNGEAIVHKSLRE 617
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPS 628
RRE +Y +F+ G F FAT + S +L++IQ FLD +V ASCEGL++K +D ++ YEPS
Sbjct: 618 RRELMYKAFQPVEGEFAFATHMNSQELEDIQAFLDESVKASCEGLMVKMLDGEESGYEPS 677
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
KRS NWLK+KKDY+ +GDSLDLV + A++G+GKRT VYGAFLLACY+ E ++++C I
Sbjct: 678 KRSRNWLKIKKDYLSGVGDSLDLVVLGAYYGKGKRTSVYGAFLLACYNPIKETYETVCNI 737
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI--SPDVWFEP 730
GTGFS+++LEE L VI +P+P+Y + T PDVWFEP
Sbjct: 738 GTGFSDSVLEELYKQLSEIVIDRPKPFYSHSSTAQHQPDVWFEP 781
>gi|342874818|gb|EGU76737.1| hypothetical protein FOXB_12758 [Fusarium oxysporum Fo5176]
Length = 879
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 296/698 (42%), Positives = 417/698 (59%), Gaps = 57/698 (8%)
Query: 70 KKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDN 129
KK+ PN S +S+P K ++PK + + K AEEP+ P N
Sbjct: 120 KKEKHASPNKSKVASTPPK-----VKSPKRSKATPKAK---AAEEPT-----PEEND--- 163
Query: 130 PIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGE 189
+S KE T + + + V K ++A V K K+ DP W+ G
Sbjct: 164 --ESAKEEASTASASEAELDDEADVEDKPEVAAKAREKVQTKFKSKTKDP--YPDWKPGT 219
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
+P+ L F ++ T R++I + LR VM TPEDL+P V L NK+AP + G+
Sbjct: 220 PIPYAALCTTFSLVEMTTKRLIIMEHCSLFLRQVMRLTPEDLLPTVLLMINKLAPDYAGI 279
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELGIG++ I+KA+ E GR+ +K +E+GDLGLVA SRS+Q M KP LTI V
Sbjct: 280 ELGIGESLIMKAIGETTGRSLQVIKADQKEIGDLGLVAVKSRSTQRTMFKPKALTIRGVH 339
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRLLQSKL 354
IA G +Q +K + IK LL AA E +++IR L+ KL
Sbjct: 340 QGLMNIATVTGNGAQGRKVDGIKKLLAAADANSTGKVDITKDKGGPSEAKFIIRFLEGKL 399
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
R+GLAE+T+L +L QA V +E +K S LE+ I+K V+S LP Y+ I+PA+L
Sbjct: 400 RLGLAERTVLVSLAQAIVAHEADAKGKVPSTSDLEKGESILKTVYSELPSYDVIIPAMLE 459
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL-ED 473
G+ L C PG+P+ PMLAKPTK ++E++++F+ FTCEYKYDGERAQIHY+ +D
Sbjct: 460 HGIMKLRENCKLRPGVPLKPMLAKPTKAITEVLDRFEGQTFTCEYKYDGERAQIHYVAKD 519
Query: 474 GSVE------------------IYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIV 515
E I+SRN+E + K+PD++ + KP +SFVLDCE V
Sbjct: 520 APQELNEASQGAAKEAAAGVASIFSRNSEDLSRKYPDILAKLHTWVKPDTKSFVLDCETV 579
Query: 516 AYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLY 575
A+D +++K+LPFQ L TR +K+V + D+KV VC++AFD+LY NG+ ++++ LR RRE L
Sbjct: 580 AWDVDEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLYLNGEAVVEKALRERRELLE 639
Query: 576 DSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNW 634
+F G F FAT + +LDEIQ FLD +V ASCEGL++K +D ++ YEPSKRS NW
Sbjct: 640 TAFNPVEGEFSFATHMNGQELDEIQVFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNW 699
Query: 635 LKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
LK+KKDY+ +GDSLDLV + A++G+GKRT VYGAFLLACY+ N+E ++++C IGTGFSE
Sbjct: 700 LKIKKDYLSGVGDSLDLVVLGAYYGKGKRTSVYGAFLLACYNPNSETYETVCNIGTGFSE 759
Query: 695 AMLEERSSSLRSKVIPKPRPYYRFAD--TISPDVWFEP 730
+LE+ + L I +P+P+Y + PDVWFEP
Sbjct: 760 QVLEDLHTQLSEITIDRPKPFYSHSSGGQHQPDVWFEP 797
>gi|254584268|ref|XP_002497702.1| ZYRO0F11572p [Zygosaccharomyces rouxii]
gi|238940595|emb|CAR28769.1| ZYRO0F11572p [Zygosaccharomyces rouxii]
Length = 731
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/543 (45%), Positives = 359/543 (66%), Gaps = 4/543 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE-GL 249
VP+ + +F I + + R+ I I + +++ +LVP YL NK+ P +E G+
Sbjct: 128 VPYADVCNIFQEIESTSSRLSIIKICSDFFTQIVKEDSRNLVPTTYLFINKLGPDYEPGM 187
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G+ ++K ++E+CG++ + VK +Y+EMGDLG +A +R+ Q M KP PLT+ +VF
Sbjct: 188 ELGLGEGLLMKTISESCGKSLAQVKNRYREMGDLGQIAMEARNVQPTMFKPKPLTVGEVF 247
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IA GKDSQ KK IK +L A E ++LIR L+SKLRIGLAE+T+L +L
Sbjct: 248 VNLRNIANAQGKDSQNKKIKLIKRMLTACQGVEAKFLIRSLESKLRIGLAEKTVLISLSN 307
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + +EQ P+ ++ +++A + ++ F +P YE ++ L G+ L C TPG
Sbjct: 308 ALLRHEQGLDVEPSDEA-VDKAEQSIRDAFCQVPNYEIVINTCLEHGISQLHKHCQLTPG 366
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PMLAKPTK ++E++++FQ F EYKYDGERAQ+H L DG++ IYSRN E T +
Sbjct: 367 IPLKPMLAKPTKAITEVLDRFQGQLFVSEYKYDGERAQLHLLPDGTMRIYSRNGENMTER 426
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+P++ + L PS S +LDCE VA+D+E+ KILPFQ LSTR RK+V D+KV VC+
Sbjct: 427 YPEIDIR-DFLSDPSTESLILDCEAVAWDKEQGKILPFQVLSTRKRKDVDAKDVKVRVCL 485
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+AFD+L NG+PL+ + LR R++ L + G F++A L + +++E+Q FLD +V
Sbjct: 486 FAFDLLCHNGEPLINKSLRERQDDLQKVTKPVDGEFRYANKLITANIEELQHFLDQSVKD 545
Query: 610 SCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
SCEGL++K +D ++ YEPSKRS NWLKLKKDY+ +GDSLDL + A++GRGKRTG YG
Sbjct: 546 SCEGLMVKMLDGPESHYEPSKRSRNWLKLKKDYLNGVGDSLDLCVLGAYYGRGKRTGTYG 605
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
FLL CY+ + E+++ CKIGTGFSE +L++ L+ + P +Y + PDVWF
Sbjct: 606 GFLLGCYNQDTGEYETCCKIGTGFSEELLQQLYDRLKPTAMEAPAAFYVYDSAQQPDVWF 665
Query: 729 EPT 731
EPT
Sbjct: 666 EPT 668
>gi|403214978|emb|CCK69478.1| hypothetical protein KNAG_0C03740 [Kazachstania naganishii CBS
8797]
Length = 727
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 259/544 (47%), Positives = 366/544 (67%), Gaps = 4/544 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE-GL 249
VP+ L +F I + R+ I + + L +VM+ P +L+P+ YL NK+ P + GL
Sbjct: 121 VPYADLCNLFQEIEGISSRLAIIKLCSSFLISVMKLDPRNLIPMTYLFINKLGPDYMPGL 180
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G+ +IK +AE+CGR+ +K +Y E+GDLG +A +R Q M KP PLT+ +VF
Sbjct: 181 ELGLGENLLIKTIAESCGRSLQQIKTKYHEIGDLGQIALEARKVQPTMFKPKPLTVGEVF 240
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
+ IA GKDSQ KK IK +L + E ++LIR L+SKLRIGLAE+T+L +L +
Sbjct: 241 QNLKSIASSQGKDSQTKKIKLIKRMLTSCQGVEAKFLIRSLESKLRIGLAEKTVLISLSK 300
Query: 370 AA-VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
A VY S ++++ +E A + ++ F +P YE ++ + L G+ NL CS P
Sbjct: 301 ALLVYEYGESDKDIDMET-VENAEQKIRDAFCQVPNYEVVIDSCLKHGIMNLDQHCSLRP 359
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
IP+ PMLAKPTK +SEI ++FQD +FTCEYKYDGERAQ+H LEDG++ IYSRN E T
Sbjct: 360 AIPLKPMLAKPTKSISEIFDRFQDQKFTCEYKYDGERAQVHLLEDGTMRIYSRNGENMTE 419
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVC 548
++P++ + +S +LDCE VA+D+E+ KILPFQ LSTR RK+V +++IKV VC
Sbjct: 420 RYPEIHIRDFVTDLSHTKSLILDCEAVAWDKEQNKILPFQVLSTRKRKDVDINEIKVRVC 479
Query: 549 IYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVD 608
++AFDIL N + L+ + L+ RR+ L+ +E G FQFAT +T+ +L+E+Q FLD +V
Sbjct: 480 LFAFDILLHNDEKLINKSLQERRDILHSITKEVTGEFQFATEMTTTNLEELQSFLDQSVK 539
Query: 609 ASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+ +GDSLDL + A+ GRGKRTG Y
Sbjct: 540 NSCEGLMVKMLEGEESHYEPSKRSRNWLKLKKDYLAGVGDSLDLCVLGAYFGRGKRTGNY 599
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVW 727
G FLL CY+ + EF++ CKIGTGFS+ +L++ L+S VI P+ Y F + PDVW
Sbjct: 600 GGFLLGCYNQDTGEFETACKIGTGFSDEVLQQLHERLKSTVIDLPKATYVFDPSAEPDVW 659
Query: 728 FEPT 731
FEPT
Sbjct: 660 FEPT 663
>gi|443894934|dbj|GAC72280.1| ATP-dependent DNA ligase I [Pseudozyma antarctica T-34]
Length = 828
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 265/560 (47%), Positives = 367/560 (65%), Gaps = 16/560 (2%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W++GE VP+ L+ F I T R+ IT+I+ L V+E +P++L+ VVYL N++ P
Sbjct: 190 WKQGEPVPYAALAAAFSEIQATTKRLEITEILTQFLVRVIERSPDNLLHVVYLCINRLCP 249
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+EGLELGIG++ +IKA+A++ GR +KK + +GDLGLVA S+ +Q M K L
Sbjct: 250 DYEGLELGIGESLLIKAIAQSTGREVPRIKKDLESLGDLGLVALNSKKNQPTMFKVSSLK 309
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ VF R IA AG SQ++K IK LL A EP++LIR L+ KLRIGLAE+++L
Sbjct: 310 VPSVFKQLRDIALVAGNKSQDRKIGMIKKLLAACQGEEPKFLIRSLEGKLRIGLAERSVL 369
Query: 365 AALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL 420
+L +A V ++ P + S LE+ ++VK V+S LP Y+ ++PALL GV L
Sbjct: 370 VSLARAVVISKLGKSIAKLPQETLASKLEQGTEVVKAVYSELPSYDLVIPALLRGGVEGL 429
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
+ C TPG+P+ PMLAKPTK +SE++++F+ FTCEYKYDGERAQ+H L DG + ++S
Sbjct: 430 RDECKLTPGVPLKPMLAKPTKAISEVLDRFEGQPFTCEYKYDGERAQVHLLADGKLAVFS 489
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD----------REKQKILPFQTL 530
RN+E + K+PD+V + R +PSV SFVLD E A+ E K+LPFQ L
Sbjct: 490 RNSENMSVKYPDLVEQIPRCIRPSVTSFVLDAEAAAWKKAELNPDTGVEEPAKLLPFQEL 549
Query: 531 STRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
S R RK+V +DIKV V ++AFD+LY NG+PLL L RR+ L D F F +A
Sbjct: 550 SRRKRKDVKAADIKVKVKLFAFDLLYLNGEPLLSRPLDERRQLLLDHFTPVEDEFDYAKA 609
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSL 649
+++I+ FL+ +V CEGL++K + D+TYEPS+RS+NWLKLKKDY+ GDSL
Sbjct: 610 EDGTSVEQIETFLERSVKEGCEGLMVKMLRGPDSTYEPSRRSMNWLKLKKDYLAGTGDSL 669
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
DLV I + G+GKRT VYGAFLLACYD ++E+FQSICKIGTGF+EA L+ ++L+ I
Sbjct: 670 DLVVIGGYLGKGKRTNVYGAFLLACYDPDSEKFQSICKIGTGFTEADLDAHYATLKQLEI 729
Query: 710 PKPRPYYRFADTISPDVWFE 729
+PYY D PDV+F+
Sbjct: 730 GARKPYYDVGDA-KPDVYFD 748
>gi|328848917|gb|EGF98110.1| hypothetical protein MELLADRAFT_41015 [Melampsora larici-populina
98AG31]
Length = 635
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 252/547 (46%), Positives = 361/547 (65%), Gaps = 7/547 (1%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
+R+P+ L F +I T R+ IT + L V+ TP +L+ ++YL N++ P +EG
Sbjct: 3 DRIPYSSLVHTFTLIDGTTKRLEITKYLSQYLMKVINRTPNELIKIIYLCINRLCPDYEG 62
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELGIG++ +IKA+ + GRT + VK ++++GDLGLVA+ SRS+Q M KP LT+ V
Sbjct: 63 IELGIGESILIKAIGSSMGRTPTQVKADFKKVGDLGLVAQNSRSTQKTMFKPKLLTVNSV 122
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
+ + IA +G SQ KK I +L A E +Y+IR L+ KLRIGLAE+T+L AL
Sbjct: 123 YQDLKTIATTSGHSSQAKKVGIITKMLAACEGEEAKYIIRSLEGKLRIGLAERTVLVALA 182
Query: 369 QAAVY----NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
A V N K + + + E +VK V+S +P Y+ ++PALL G+ L C
Sbjct: 183 TAVVTTGTSNPTKRKSKETLSTEILEGTNLVKSVYSEIPSYDLVIPALLKGGIQGLRENC 242
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
TPG+P+ PMLAKPTK +SE++++F+ FTCEYKYDGERAQIHYLEDG++ I+SRN+E
Sbjct: 243 KLTPGVPLKPMLAKPTKSISEVLDRFEGQSFTCEYKYDGERAQIHYLEDGTISIFSRNSE 302
Query: 485 RNTGKFPDVVLAVSR-LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
+ K+PD++ + + +K +SFVLD E+VA+D +KILPFQ LS R RK+V S+I
Sbjct: 303 NMSEKYPDMLDQMKKSIKTDITKSFVLDSEVVAWDPICKKILPFQELSKRKRKDVKRSEI 362
Query: 544 KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFL 603
+ + I+ FD+LY N + L+++ L+ RR L + F E F A +L S ++EIQ FL
Sbjct: 363 DIKIKIFGFDLLYLNDEALIKQDLKYRRMKLKEHFNEIEDEFNLAKSLDSDKVEEIQVFL 422
Query: 604 DAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
D ++ ASCEGL++K ++ +A YEPS+RS+NWLK+KKDY+ +GDSLDLV I A+ G+GK
Sbjct: 423 DESIKASCEGLMVKMLNGENAYYEPSRRSMNWLKVKKDYLAGLGDSLDLVVIGAYFGKGK 482
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
RT VYGAFLL YD + E +QSICKIGTGF++ +LE L+ + + + YY D +
Sbjct: 483 RTNVYGAFLLGIYDQSTESYQSICKIGTGFTDEVLESHYQKLKPLELLQKKSYYDTGD-V 541
Query: 723 SPDVWFE 729
PDVW E
Sbjct: 542 KPDVWIE 548
>gi|296416928|ref|XP_002838121.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634027|emb|CAZ82312.1| unnamed protein product [Tuber melanosporum]
Length = 976
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 248/566 (43%), Positives = 370/566 (65%), Gaps = 20/566 (3%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W GE P+ L F+++ + T R+ LR V++ +P++L+ V++L NK+A
Sbjct: 330 WVAGEPTPYAALVTTFNLLESTTKRLEKISHTSRFLRQVLQLSPDELLLVIHLMINKLAA 389
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
EG+E+GIG++ ++KA+ E+CGR+ +++ +E GDLGLVA SR++Q + P PLT
Sbjct: 390 DFEGVEMGIGESLLMKAIGESCGRSLERIREDQRECGDLGLVAMKSRNNQKTLFAPRPLT 449
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I V IAK G+ Q +K + I+ LL AA E ++LIR L+ KLR+GLAE+T+L
Sbjct: 450 IAVVHKGLLGIAKTKGEGGQGRKVSAIRKLLAAAKGDEAKFLIRGLEGKLRLGLAERTVL 509
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
+L A + +EQ + L+++ ++ V+S LP YE I+PA+ G+ ++ C
Sbjct: 510 VSLSSAMITHEQELVGKTPTTAMLDQSELNLRSVYSELPSYEIIIPAMREHGIMDIKKYC 569
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS--------- 475
PG+P+ PMLAKPTK +SE++++F++ FTCEYKYDGERAQIHY+ S
Sbjct: 570 KLQPGVPVKPMLAKPTKAISEVLDRFENKRFTCEYKYDGERAQIHYVSPKSSIEYPPATL 629
Query: 476 --------VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
+++SRN+E +GK+PD++ A++ +P V SFVLDCE V +D ++LPF
Sbjct: 630 SGEPIKNLAKVFSRNSEDLSGKYPDILAAMNEWVRPEVESFVLDCEAVGWDETNNRLLPF 689
Query: 528 QTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
Q L TR +K+V+L D+K+ VC++AFD+L+ NG+P+++E L RR+ ++ +F E P F F
Sbjct: 690 QMLQTRKKKDVALEDVKIRVCVHAFDLLFLNGKPVVRESLDDRRKLMHKTFIEVPNQFVF 749
Query: 588 ATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIG 646
A + S L+EI+ FLD +V SCEGL++K MD ++ YEPS+RS NWLK+KKDYI+ +G
Sbjct: 750 ARYMDSSHLEEIRLFLDQSVKDSCEGLMVKMMDGPESFYEPSQRSRNWLKIKKDYIDELG 809
Query: 647 DSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRS 706
DSLDLV I A+ GRGKRT VYG+FLLACY+ + ++S+C IGTGF+EA LEE +L
Sbjct: 810 DSLDLVVIGAYWGRGKRTSVYGSFLLACYNPGTQNYESLCNIGTGFTEAELEEFYGTLHP 869
Query: 707 KVIPKPRPYYRF--ADTISPDVWFEP 730
I + +P+Y + PDVWFEP
Sbjct: 870 LEIDRAKPFYDHPSGNAGKPDVWFEP 895
>gi|449017186|dbj|BAM80588.1| DNA ligase I [Cyanidioschyzon merolae strain 10D]
Length = 1028
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 267/572 (46%), Positives = 384/572 (67%), Gaps = 9/572 (1%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
F+P CWE G+ VP+ FL+ F+ ++ +GRI +T + +L V+ TP DL+P +Y
Sbjct: 385 FEP----CWEPGQPVPYSFLANAFETMAGTSGRIDLTRQLACVLFHVLNRTPVDLLPTIY 440
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++APAHEGLE+G+GDA +++ALA+A GR+ S +++ Y GDLG VA SR++Q
Sbjct: 441 LVINRLAPAHEGLEIGVGDALLLQALADATGRSLSKLREDYHRTGDLGDVAVHSRTTQRT 500
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M LTI V++ IA+ +GK QE+K+ RI+ LLVAA + E +++ R LQ +LRI
Sbjct: 501 MFAVPRLTIRNVYNELLAIARASGKAMQEEKRRRIQKLLVAAKNNEAKFIARALQGRLRI 560
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPAL--LT 414
LAE+T++ AL A V N S+ + +E AA +++ + P + I AL L
Sbjct: 561 RLAEKTVILALAAAFVQNAAASRGTHPDAARVERAAHLLRTSSNECPSWNMITEALLELQ 620
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
D L C TPG+P+ PMLAKP++ ++E++ +F+ M FTCEYKYDGERAQIH L DG
Sbjct: 621 DIDERLLERCHLTPGLPVMPMLAKPSRSIAEVLTRFEGMRFTCEYKYDGERAQIHGLADG 680
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR--SFVLDCEIVAYDREKQKILPFQTLST 532
S+ IYSRNAE +T K+PDV+ + + S SF+LD E+VA+DR+ Q+ILPFQ +
Sbjct: 681 SIRIYSRNAEDHTRKYPDVMEQILQAVGSSSDQPSFILDSEVVAFDRDAQRILPFQYIQQ 740
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
RARK+VSL D+K +V I AFDILY G+PL ++ L RR L D+F+E PG F+FAT
Sbjct: 741 RARKHVSLDDLKTNVLIVAFDILYWRGEPLTRKPLAERRAILRDAFQEVPGGFRFATRRD 800
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRD-ATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
DLD IQKF++ AV SCEGL++K ++ +TYEP+ R+ +WLKLKKDY+ +IGD+LDL
Sbjct: 801 VSDLDGIQKFMEEAVRDSCEGLMVKALEGPLSTYEPANRTQHWLKLKKDYLRTIGDTLDL 860
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
VPI A++GRGKRTG +G+FLLACY+ E+F+++ ++GTGFSE + + S V+
Sbjct: 861 VPIGAYYGRGKRTGWFGSFLLACYNPETEQFEAVTRVGTGFSEEQMAQLHSEYAQYVLDS 920
Query: 712 PRPYYRFADTISPDVWFEPTERPETSNSPASI 743
PRPY ++++ PD+W +P + E + SI
Sbjct: 921 PRPYVACSESVKPDIWLDPRQVWEVQCADLSI 952
>gi|392578982|gb|EIW72109.1| hypothetical protein TREMEDRAFT_25666 [Tremella mesenterica DSM
1558]
Length = 671
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/553 (46%), Positives = 359/553 (64%), Gaps = 8/553 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNML------RTVMETTPEDLVPVVYLA 238
W++GE +P+ L F+ I T R+ I I+ L T + +L+ VVYL
Sbjct: 42 WKEGEPLPYAALVATFEKIEATTKRLEILQILTQFLLVVAKRDTATDAKSSNLLKVVYLC 101
Query: 239 ANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMR 298
N++ P + G+ELGIG++ ++K++AE+ GR S +K+ ++ GDLG VA SR++Q M
Sbjct: 102 INRLCPDYMGIELGIGESLLVKSIAESTGRAMSKIKEDLRKEGDLGKVAMNSRNNQPTMF 161
Query: 299 KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGL 358
KP LT+ VF + IAK +G SQ KK I LL A E ++++R L+ KLRIGL
Sbjct: 162 KPKALTVPYVFQSLTEIAKASGNASQNKKVGIINKLLAACQGTEAKFIVRSLEGKLRIGL 221
Query: 359 AEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
A++TL+ AL A V + LEE A IVK ++S LP Y+ I+PAL+ G+
Sbjct: 222 ADKTLVVALAHAMVLKRDKRIGGEELAKKLEEGADIVKSIYSELPNYDLIIPALMKGGIE 281
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
L C TPG+P+ PMLAKPTK ++E++++F+ EFTCEYKYDGERAQ+H LEDG++ +
Sbjct: 282 GLQENCKLTPGVPLKPMLAKPTKAITEVLDRFEGKEFTCEYKYDGERAQVHLLEDGTIAV 341
Query: 479 YSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+SRN+E + K+PD+V + R K V+SFV+D E VAYD E++K+LPFQ LS R RK+V
Sbjct: 342 FSRNSENMSAKYPDLVEQLPRCIKEGVKSFVIDAEAVAYDLEQKKLLPFQDLSRRKRKDV 401
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
DI V V ++AFD+LY NG+ LLQ++L+ RR L F+ P F FA + +E
Sbjct: 402 RTEDITVRVHLFAFDLLYLNGESLLQKELKERRSLLQKHFQPIPSEFAFAVSSDCTTTEE 461
Query: 599 IQKFLDAAVDASCEGLIIKTM-DRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAF 657
IQ FL+ +V CEGL++K + + +TYEPS+RS+NWLKLKKDY+ IGDSLDLV I A+
Sbjct: 462 IQSFLEESVKDGCEGLMVKMLTTQSSTYEPSRRSINWLKLKKDYLSGIGDSLDLVVIGAY 521
Query: 658 HGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYR 717
+G+GKRT VYGAFLL+CYD ++E +Q+ICKIGTGFSE +L + L+ + R
Sbjct: 522 YGKGKRTSVYGAFLLSCYDPDSEHYQTICKIGTGFSEEILIKFHEMLKPLELQVVRGDIE 581
Query: 718 FADTISPDVWFEP 730
PDVWFEP
Sbjct: 582 VGGA-KPDVWFEP 593
>gi|260947188|ref|XP_002617891.1| hypothetical protein CLUG_01350 [Clavispora lusitaniae ATCC 42720]
gi|238847763|gb|EEQ37227.1| hypothetical protein CLUG_01350 [Clavispora lusitaniae ATCC 42720]
Length = 780
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 273/561 (48%), Positives = 372/561 (66%), Gaps = 22/561 (3%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMET--TPEDLVPVVYLAANKIAPAHE 247
++P+ L+ V D I E+GR+ IT +V L V+E +P++LV VVYL N++ P +E
Sbjct: 160 KIPYSRLTDVLDKIEKESGRLKITALVSEFLLEVLEQYPSPDNLVRVVYLFINRLGPDYE 219
Query: 248 -GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTIT 306
LELG+G+ +IKA++E GR+ + +KK Y E GDLGLVA+ SRS Q M KP PL +
Sbjct: 220 PDLELGLGETLLIKAISECYGRSAAKIKKDYHEAGDLGLVAQKSRSGQPTMFKPAPLDVD 279
Query: 307 KVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT--DCEPQYLIRLLQSKLRIGLAEQTLL 364
VF+ IAK GKDSQ +K I +L A E ++LIR L+ KLRIGLAE+T+L
Sbjct: 280 TVFENLTKIAKSTGKDSQTRKIGIINKMLTACNMKSSEAKFLIRSLEGKLRIGLAEKTVL 339
Query: 365 AALGQAAVY--NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
AL QA + N+ K P L +A ++++ FS++P YE I+ G+ NL
Sbjct: 340 IALAQAFLNFENKTSKKISP---EQLTKAENVIREAFSLIPNYEIIIRNAHKYGILNLLE 396
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
C TPG+P+ PMLAKPTK + EI+++FQ EFTCEYKYDGERAQ+H L DGSV +YSRN
Sbjct: 397 HCQLTPGVPLKPMLAKPTKSIGEILDRFQGEEFTCEYKYDGERAQVHLLADGSVRVYSRN 456
Query: 483 AERNTGKFPDVVLAVSRL--------KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
+E + ++PD++ V +K S +S +LDCE VA+DREKQKILPFQ LSTR
Sbjct: 457 SEDMSERYPDLLSIVKDFIKVTTNSEEKESPKSMILDCEAVAWDREKQKILPFQVLSTRK 516
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI 594
RK+V+ SDIKV +C++AFD+LY N + L+ + L RR L+++F+ G FQ+AT S
Sbjct: 517 RKDVNESDIKVHICLFAFDLLYYNNESLITKSLEERRSCLFENFKTIEGKFQYATYKNSS 576
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
DLDE+Q FLD +V SCEGL++K + ++ YEPSKRS NWLKLKKDY+ +GDSLDLV
Sbjct: 577 DLDELQAFLDQSVKDSCEGLMVKMLHGPESFYEPSKRSRNWLKLKKDYLAGVGDSLDLVV 636
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR 713
+ A+ G+GKRTG YG FLLA Y+ + E+++ CKIGTGFS+ L + L+ I +P+
Sbjct: 637 VGAYVGKGKRTGSYGGFLLATYNDDTGEYETTCKIGTGFSDEDLASLYAKLKPTEISRPK 696
Query: 714 PYYRFADTIS---PDVWFEPT 731
P+Y + S PDVW EPT
Sbjct: 697 PFYVYDTKNSNAVPDVWLEPT 717
>gi|302697907|ref|XP_003038632.1| hypothetical protein SCHCODRAFT_46359 [Schizophyllum commune H4-8]
gi|300112329|gb|EFJ03730.1| hypothetical protein SCHCODRAFT_46359, partial [Schizophyllum
commune H4-8]
Length = 833
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/562 (46%), Positives = 373/562 (66%), Gaps = 10/562 (1%)
Query: 178 DPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVME-TTPED---LVP 233
D + W+ G+ VP+ L+ F I + T R+ + L V++ + P D L+
Sbjct: 195 DVDIKGGWKVGDPVPYAALTKTFSHIESTTKRLEKNAFLTAFLTLVIQRSAPNDHNSLLQ 254
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS 293
VYL N+++P + G+ELGIG++ +IKA++E+ GR +K ++ GDLGLVA S++S
Sbjct: 255 AVYLCINRLSPDYIGIELGIGESLLIKAISESTGRNAGLIKADLKKEGDLGLVAMNSKNS 314
Query: 294 QSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSK 353
Q + KP PLT+ VF + IA +G SQ KK + I LL A D E +Y++R L+ K
Sbjct: 315 QRTLFKPKPLTLPFVFSNLKEIALSSGHSSQTKKVSIITKLLAACQDFEAKYIVRSLEGK 374
Query: 354 LRIGLAEQTLLAALGQAAVYNEQHSKP----PPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
LRIG AE+++L AL AAV E + + + LEE+ IVK V+S LP Y+K++
Sbjct: 375 LRIGNAERSVLVALAHAAVLAENAKRDRKLHGEKLAARLEESTNIVKAVYSELPSYDKVI 434
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PALL G+ L C +PG+P+ PMLAKPTK + E++++F++ FTCEYKYDGERAQ+H
Sbjct: 435 PALLDHGIDGLREHCKLSPGVPLKPMLAKPTKAIGEVLDRFENKRFTCEYKYDGERAQVH 494
Query: 470 YLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQT 529
+EDG + ++SRN+E + K+PD++ + R K S +SFVLD E VA DR K++PFQ
Sbjct: 495 LMEDGKIAVFSRNSEDMSKKYPDLMEQIPRCIKDSTKSFVLDAEAVAIDRTTGKLMPFQE 554
Query: 530 LSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT 589
LS R RK+V + DI+V VC++AFD+LY NG+PLLQ+ L RR L +SF+ FQFA
Sbjct: 555 LSKRKRKDVKVEDIQVKVCLFAFDLLYLNGEPLLQKSLAERRVLLRESFQIVESEFQFAK 614
Query: 590 TLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDS 648
+ S ++EIQ FL+ +V CEGL++K ++ DA+ YEPS+RS+NWLKLKKDY+ +GDS
Sbjct: 615 STDSETVEEIQTFLEESVKDGCEGLMVKMLESDASYYEPSRRSINWLKLKKDYLAGVGDS 674
Query: 649 LDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
LDLV + ++G+GKRT VYGAFLLACYD+++EE+Q+ICKIGTGFSE L+ + L+
Sbjct: 675 LDLVVVGGYYGKGKRTNVYGAFLLACYDADSEEYQTICKIGTGFSEEALQSHYNVLKPLE 734
Query: 709 IPKPRPYYRFADTISPDVWFEP 730
+ KPR + PD+WFEP
Sbjct: 735 MEKPRGDIKVGGA-KPDIWFEP 755
>gi|336469372|gb|EGO57534.1| hypothetical protein NEUTE1DRAFT_41251 [Neurospora tetrasperma FGSC
2508]
gi|350290993|gb|EGZ72207.1| ATP-dependent DNA ligase [Neurospora tetrasperma FGSC 2509]
Length = 770
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/584 (45%), Positives = 370/584 (63%), Gaps = 38/584 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F +I R+LI + LR V+ TP+DL+P V L NK+AP
Sbjct: 105 WKAGEPVPYAALCTTFSLIEQTRKRLLIMEYCSLFLRQVLRLTPDDLLPTVLLMINKLAP 164
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ + VK +E+GDLGLVA SRS Q M KP PLT
Sbjct: 165 DYAGIELGIGESLIMKAIGETTGRSIAVVKNDQKEIGDLGLVAVKSRSKQPTMFKPKPLT 224
Query: 305 ITKVFDTFRLIAKE-AGKDSQEKKKNRIKALLVAATD---------------CEPQYLIR 348
I V IA G +Q+KK + IK LL AA E ++++R
Sbjct: 225 IRGVHKGLMDIATTMTGTGAQQKKVDGIKKLLSAADANSTGKVDITKEKGGPSEAKFIVR 284
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ KLR+GLAE++++ +L QA + +E K +S +A I+K V+S LP Y+ I
Sbjct: 285 FLEGKLRLGLAEKSVIVSLAQAMIAHEFAQKGKIPSESDFSKAESILKTVYSELPSYDVI 344
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+PA+L G+ NL C PG+P+ PMLA PTK ++E++++F+ FTCEYKYDGERAQI
Sbjct: 345 IPAMLQHGIMNLREHCKLRPGVPLKPMLANPTKAITEVLDRFEGQTFTCEYKYDGERAQI 404
Query: 469 HYLED-------------------GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
HY+ G I+SRN+E + K+PDV+ + K +SFV
Sbjct: 405 HYVAKDAPKSEGDLSQVASKDTGKGVAAIFSRNSEDLSQKYPDVLAKLPTWVKEGTKSFV 464
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
LDCE VA+D K+LPFQ L TR +K+V L D+KV VC++AFD+LY NGQ ++++ LR
Sbjct: 465 LDCESVAWDTVDHKLLPFQQLMTRKKKDVKLEDVKVKVCVFAFDLLYLNGQAVVEKSLRE 524
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPS 628
RRE L ++F+ G F FAT++ +LDEIQ FLD +V A CEGL++K +D ++ YEPS
Sbjct: 525 RRELLREAFKPVEGEFAFATSMDGQELDEIQTFLDESVKAGCEGLMVKMLDGAESGYEPS 584
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
KRS NWLK+KKDY+ IGDSLDLV + A+HG+GKRT V+GAFLLACY+ + + ++++C I
Sbjct: 585 KRSRNWLKIKKDYLAGIGDSLDLVVLGAYHGKGKRTSVFGAFLLACYNPSTDTYETVCNI 644
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
GTGFS+ +L+E SSL +I +P+P+Y PDVWFEP
Sbjct: 645 GTGFSDEVLQELHSSLSPIIIDRPKPFYAHSSGGQHQPDVWFEP 688
>gi|50307281|ref|XP_453619.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642753|emb|CAH00715.1| KLLA0D12496p [Kluyveromyces lactis]
Length = 700
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 255/543 (46%), Positives = 366/543 (67%), Gaps = 4/543 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE-GL 249
+PF L F I + R+ IT I L +V+E PE LVP+ YL +K+ P +E GL
Sbjct: 97 IPFAELCDTFQAIEVTSSRLAITAICSKFLYSVLERDPESLVPITYLFIHKLGPDYEPGL 156
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G++ +IK ++EACG++ ++ +Y+E+GDLG +A +R+ Q M KP PLT+ +VF
Sbjct: 157 ELGLGESLLIKTISEACGKSIQQIRNKYREIGDLGEIAMQARNVQPTMFKPKPLTVGEVF 216
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
+ IAK GKDSQ +K + IK +L A E ++LIR L+SKLRIGLAE+T+L ++ +
Sbjct: 217 NNLVSIAKSNGKDSQSRKGSLIKKMLTACKGYEAKFLIRSLESKLRIGLAEKTVLISVSK 276
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + +E + + P +E+A +++ F +P YE I+ L G+ NL+ PG
Sbjct: 277 AILTHEHNGQEPST--EMVEQAESLIRDAFCQVPNYEMIINVALQYGIMNLNQHIKLRPG 334
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PMLAKPTK +SE++++FQ +FTCEYKYDGERAQ+H DGS++IYSRN E T +
Sbjct: 335 IPLQPMLAKPTKSISEVLDRFQGTKFTCEYKYDGERAQVHLCRDGSMKIYSRNGEDMTER 394
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+P++ + + +SF++D E VA+D+E+ KILPFQ LSTR RK V L D+KV VC+
Sbjct: 395 YPEIDVKHYVKDLGATKSFIVDSEAVAWDQEQGKILPFQVLSTRKRKGVELKDVKVRVCL 454
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
YAFDIL N +PL+ + RR+ L D+F G F FA LT+ + DE+QK+LD +V
Sbjct: 455 YAFDILCLNDEPLINKSFHERRQILLDTFNGTQGQFDFANELTTTNFDELQKYLDQSVKD 514
Query: 610 SCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+E +GDSLDLV + A++GRGKRTG YG
Sbjct: 515 SCEGLMVKMLEGEESHYEPSKRSRNWLKLKKDYLEGVGDSLDLVVLGAYYGRGKRTGTYG 574
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
FLL CY+ ++EEF++ CKIGTGFS+ ML++ + L+ + P + + DVWF
Sbjct: 575 GFLLGCYNLDSEEFETCCKIGTGFSDEMLQDLYTKLKDTTVEHPSTNVIYDSSAPADVWF 634
Query: 729 EPT 731
EP+
Sbjct: 635 EPS 637
>gi|410075868|ref|XP_003955516.1| hypothetical protein KAFR_0B00830 [Kazachstania africana CBS 2517]
gi|372462099|emb|CCF56381.1| hypothetical protein KAFR_0B00830 [Kazachstania africana CBS 2517]
Length = 710
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 254/543 (46%), Positives = 365/543 (67%), Gaps = 3/543 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE-GL 249
+P+ + ++F I N + R+ I + M+ +L+P+ YL NK+ P +E GL
Sbjct: 105 IPYADVCVLFQEIENISSRLQIIKLCSEFFTKAMKQNTANLIPLTYLFINKLGPDYEMGL 164
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G+ ++K ++E+CG++ VK Y+++GDLG +A +R+ Q M KP PLT+ VF
Sbjct: 165 ELGLGENLLMKTISESCGKSLQQVKLDYKDIGDLGTIAMNARNVQPTMFKPKPLTVGYVF 224
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
+LIAK +GKDSQ KK IK LL A E +YLIR L+SKLRIGLAE+++L +L +
Sbjct: 225 QNLKLIAKSSGKDSQLKKIRLIKKLLTACKGIEAKYLIRSLESKLRIGLAEKSVLISLSK 284
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + NE ++ P+++ +E+A + ++ F +P YE ++ + L G+ NL CS PG
Sbjct: 285 ALLINEYNNTLDPDME-LIEKAEQKIRDAFCQIPNYEIVINSCLKYGIMNLDEHCSLRPG 343
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PMLAKPTK + E+ ++FQ++ FT EYKYDGERAQ+H + DGS+ IYSRN E T +
Sbjct: 344 IPLKPMLAKPTKTIMEVFDRFQNIHFTSEYKYDGERAQVHLMNDGSMRIYSRNGENMTER 403
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+P++ + +S ++DCE VA+DRE++KILPFQ LSTR RK+V + DIKV +C+
Sbjct: 404 YPEINVTDFIKDLNLTKSLIIDCEAVAWDREEKKILPFQVLSTRKRKDVDIKDIKVRICL 463
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+AFDIL N + L+ + LR RRE L+ E G F +A L++ +LDE+Q FLD +V
Sbjct: 464 FAFDILCHNDEKLINKSLRERREILHSVTREVHGEFTYAKELSTNNLDELQLFLDQSVKD 523
Query: 610 SCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
SCEGL++K +D D+ YEPSKRS NWLKLKKDY++ +GDSLDL + AF+GRGKRTG YG
Sbjct: 524 SCEGLMVKVLDGEDSHYEPSKRSRNWLKLKKDYLDGVGDSLDLCVLGAFYGRGKRTGTYG 583
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
FLL CY+ + EF++ CKIGTGFS+ +L+ L+S I P+ Y + + PDVWF
Sbjct: 584 GFLLGCYNQDTGEFETACKIGTGFSDEVLQSLYDRLKSTTIDGPKATYIYDSSAQPDVWF 643
Query: 729 EPT 731
EPT
Sbjct: 644 EPT 646
>gi|207347088|gb|EDZ73389.1| YDL164Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 755
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/546 (44%), Positives = 364/546 (66%), Gaps = 5/546 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ + VF+ I + R+ I I + +M+ + ++L+P YL N++ P +E
Sbjct: 146 IPYSEVCEVFNKIEAISSRLEIIRICSDFFIKIMKQSSKNLIPTTYLFINRLGPDYEAGL 205
Query: 251 LGIGDASI-IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
++ +K ++E CG++ S +K +Y+++GDLG +A +R+ Q M KP PLT+ +VF
Sbjct: 206 ELGLGENLLMKTISETCGKSMSQIKLKYKDIGDLGEIAMGARNVQPTMFKPKPLTVGEVF 265
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK GKDSQ KK IK +L A E ++LIR L+SKLRIGLAE+T+L +L +
Sbjct: 266 KNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKTVLISLSK 325
Query: 370 AAVYNEQHSKPPPNIQSP---LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF 426
A + ++++ + P+ P LE A + ++ F +P YE ++ + L G+ NL C+
Sbjct: 326 ALLLHDENREDSPDKDVPMDVLESAQQKIRDAFCQVPNYEIVINSCLEHGIMNLDKYCTL 385
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERN 486
PGIP+ PMLAKPTK ++E++++FQ FT EYKYDGERAQ+H L DG++ IYSRN E
Sbjct: 386 RPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTMRIYSRNGENM 445
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
T ++P++ + + ++ +LDCE VA+D+++ KILPFQ LSTR RK+V L+D+KV
Sbjct: 446 TERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPFQVLSTRKRKDVELNDVKVK 505
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFDIL N + L+ + L+ RRE+L + PG FQ+AT +T+ +LDE+QKFLD +
Sbjct: 506 VCLFAFDILCYNNERLINKSLKERREYLTKVTKVVPGEFQYATQITTNNLDELQKFLDES 565
Query: 607 VDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
V+ SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+E +GDSLDL + A++GRGKRTG
Sbjct: 566 VNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYYGRGKRTG 625
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
YG FLL CY+ + EF++ CKIGTGFS+ ML+ L +I P+ + F + PD
Sbjct: 626 TYGGFLLGCYNQDTGEFETCCKIGTGFSDEMLQLLHDRLTPTIIDGPKATFVFDSSAEPD 685
Query: 726 VWFEPT 731
VWFEPT
Sbjct: 686 VWFEPT 691
>gi|408397149|gb|EKJ76299.1| hypothetical protein FPSE_03554 [Fusarium pseudograminearum CS3096]
Length = 886
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/583 (45%), Positives = 374/583 (64%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G VP+ L F ++ T R++I + LR VM TP+DL+P V L NK+AP
Sbjct: 222 WQPGTPVPYAALCTTFSLVEMTTKRLIIMEHCSLFLRQVMRLTPDDLLPTVLLMINKLAP 281
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ +K +++GDLGLVA SRS+Q M KP PLT
Sbjct: 282 DYAGIELGIGESLIMKAIGETTGRSLQVIKADQKDIGDLGLVAVKSRSTQRTMFKPKPLT 341
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
+ + IA G +Q +K + IK LL AA E +++IR
Sbjct: 342 VRGIHQGLMNIATVTGNGAQGRKVDGIKKLLAAADANSTGKVDITKDKGGPSEAKFIIRF 401
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
L+ KLR+GLAE+T+L +L QA V +E ++K + LE+ I+K V+S LP Y+ I+
Sbjct: 402 LEGKLRLGLAERTVLVSLAQAIVAHEAYTKDKAPSATDLEKGEAILKTVYSELPSYDVII 461
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PA+L G+ L +TC PG+P+ PMLAKPTK ++E++++F+ +FTCEYKYDGERAQIH
Sbjct: 462 PAILEHGIMKLRDTCKLRPGVPLKPMLAKPTKAITEVLDRFEGQKFTCEYKYDGERAQIH 521
Query: 470 YLED-------------------GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
Y+ G I+SRN+E + K+PD++ + K +SFVL
Sbjct: 522 YVAKDAPQELNEASQGAAKEVAAGVASIFSRNSEDLSRKYPDILAKLHTWVKLDTKSFVL 581
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D +++K+LPFQ L TR +K+V + D+KV VC++AFD+LY NG+ ++++ LR R
Sbjct: 582 DCETVAWDVDEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLYLNGEAVVEKALRER 641
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDAT-YEPSK 629
RE L +F G F FAT + +LDEIQ FLD +V ASCEGL++K +D D + YEPSK
Sbjct: 642 RELLQTAFNPVEGEFAFATHMDGQELDEIQVFLDESVKASCEGLMVKMLDGDESGYEPSK 701
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ +GDSLDLV + A++G+GKRT VYGAFLLACY+ N+E+++++C IG
Sbjct: 702 RSRNWLKIKKDYLSGVGDSLDLVVLGAYYGKGKRTSVYGAFLLACYNPNSEKYETVCNIG 761
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
TGFSE +LE+ L I +P+P+Y PD+WFEP
Sbjct: 762 TGFSEQVLEDLHKQLSEITIDRPKPFYSHSSGGQHQPDIWFEP 804
>gi|170583972|ref|XP_001896804.1| DNA ligase [Brugia malayi]
gi|158595867|gb|EDP34348.1| DNA ligase, putative [Brugia malayi]
Length = 552
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 253/545 (46%), Positives = 358/545 (65%), Gaps = 5/545 (0%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
R+P++ L+ F+ I + R+ I I+ + V+E TP +L VYL NK+ P +EG+
Sbjct: 8 RIPYLCLAKTFEGIEATSSRLEIVKILASFFMKVIERTPSELATCVYLCVNKLGPTYEGM 67
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELGI + +++KA+A+A GR +K+ + GDLGLVA+ SRS+Q ++ P PLT+T VF
Sbjct: 68 ELGIAEGALMKAIAQATGRKIDKLKEDLNQKGDLGLVAQMSRSNQRILFTPAPLTVTAVF 127
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
+ +AK +G + KK + IK+LLV+ DCE +YLIR L KLRIGLAEQ++LAAL
Sbjct: 128 HKLQDMAKTSGHMAMNKKVDMIKSLLVSCRDCEARYLIRCLSGKLRIGLAEQSILAALAN 187
Query: 370 AAV-YNEQHSKPPPNIQSPLEEAAK---IVKQVFSVLPVYEKIVPALLTDGVWNLSNTCS 425
A + + + + + E A+ +++ +S P YEK+V A+L G+ L C
Sbjct: 188 AFTDFEIKKTGEKLSCEKMKERQAEDILLLRSTYSECPDYEKVVAAVLNGGLSKLPEKCK 247
Query: 426 FTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAER 485
TPGIP+ PMLA PTKG++E++ +F F CE+KYDGERAQIHY G ++I+SRN E
Sbjct: 248 ITPGIPVKPMLAHPTKGIAEVLKRFGGSVFACEFKYDGERAQIHYDSSG-IKIFSRNQEN 306
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV 545
NT K+PD+ + ++ SF++D EIVA+D + ILPFQ LSTR RKNV S+IKV
Sbjct: 307 NTDKYPDLKELLKQIMDEETTSFIIDSEIVAFDPIHETILPFQILSTRKRKNVGDSEIKV 366
Query: 546 DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDA 605
V ++ FD+L+ NGQ L + R RRE L F+E G F + + D ++I +FLD
Sbjct: 367 KVHVFMFDLLFWNGQSLTKSPYRKRREMLQRHFKEVGGVCGFVASKDTEDTEQISEFLDD 426
Query: 606 AVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
A+ +CEGL+IKT+D DATYE +KRS +WLKLKKDY+++IGD++DL I AF G GKRTG
Sbjct: 427 AIKGNCEGLMIKTLDVDATYEIAKRSHSWLKLKKDYLDTIGDTVDLTVIGAFFGTGKRTG 486
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
VYG +LLACY+ NEE++SICKIGTG ++ L ++ I K RPYY + ++ PD
Sbjct: 487 VYGGYLLACYNPINEEYESICKIGTGLTDDDLRQQHQYFEELRIEKARPYYSYDSSLKPD 546
Query: 726 VWFEP 730
VWF+P
Sbjct: 547 VWFDP 551
>gi|190405162|gb|EDV08429.1| DNA ligase [Saccharomyces cerevisiae RM11-1a]
Length = 755
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/546 (44%), Positives = 364/546 (66%), Gaps = 5/546 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ + VF+ I + R+ I I + +M+ + ++L+P YL N++ P +E
Sbjct: 146 IPYSEVCEVFNKIEAISSRLEIIRICSDFFIKIMKQSSKNLIPTTYLFINRLGPDYEAGL 205
Query: 251 LGIGDASI-IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
++ +K ++E CG++ S +K +Y+++GDLG +A +R+ Q M KP PLT+ +VF
Sbjct: 206 ELGLGENLLMKTISETCGKSMSQIKLKYKDIGDLGEIAMGARNVQPTMFKPKPLTVGEVF 265
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK GKDSQ KK IK +L A E ++LIR L+SKLRIGLAE+T+L +L +
Sbjct: 266 KNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKTVLISLSK 325
Query: 370 AAVYNEQHSKPPPNIQSP---LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF 426
A + ++++ + P+ P LE A + ++ F +P YE ++ + L G+ NL C+
Sbjct: 326 ALLLHDENREDSPDKDVPMDVLESAQQKIRDAFCQVPNYEIVINSCLEHGIMNLDKYCTL 385
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERN 486
PGIP+ PMLAKPTK ++E++++FQ FT EYKYDGERAQ+H L DG++ IYSRN E
Sbjct: 386 RPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTMRIYSRNGENM 445
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
T ++P++ + + ++ +LDCE VA+D+++ KILPFQ LSTR RK+V L+D+KV
Sbjct: 446 TERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPFQVLSTRKRKDVELNDVKVK 505
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFDIL N + L+ + L+ RRE+L + PG FQ+AT +T+ +LDE+QKFLD +
Sbjct: 506 VCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYATQITTNNLDELQKFLDES 565
Query: 607 VDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
V+ SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+E +GDSLDL + A++GRGKRTG
Sbjct: 566 VNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYYGRGKRTG 625
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
YG FLL CY+ + EF++ CKIGTGFS+ ML+ L +I P+ + F + PD
Sbjct: 626 TYGGFLLGCYNQDTGEFETCCKIGTGFSDEMLQLLHDRLTPTIIDGPKATFVFDSSAEPD 685
Query: 726 VWFEPT 731
VWFEPT
Sbjct: 686 VWFEPT 691
>gi|6320038|ref|NP_010117.1| DNA ligase (ATP) CDC9 [Saccharomyces cerevisiae S288c]
gi|2506361|sp|P04819.2|DNLI1_YEAST RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1; Flags:
Precursor
gi|1061275|emb|CAA91582.1| DNA ligase [Saccharomyces cerevisiae]
gi|1431259|emb|CAA98737.1| CDC9 [Saccharomyces cerevisiae]
gi|51830214|gb|AAU09681.1| YDL164C [Saccharomyces cerevisiae]
gi|151941840|gb|EDN60196.1| DNA ligase [Saccharomyces cerevisiae YJM789]
gi|256273587|gb|EEU08520.1| Cdc9p [Saccharomyces cerevisiae JAY291]
gi|259145080|emb|CAY78344.1| Cdc9p [Saccharomyces cerevisiae EC1118]
gi|285810873|tpg|DAA11697.1| TPA: DNA ligase (ATP) CDC9 [Saccharomyces cerevisiae S288c]
gi|349576917|dbj|GAA22086.1| K7_Cdc9p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 755
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/546 (44%), Positives = 364/546 (66%), Gaps = 5/546 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ + VF+ I + R+ I I + +M+ + ++L+P YL N++ P +E
Sbjct: 146 IPYSEVCEVFNKIEAISSRLEIIRICSDFFIKIMKQSSKNLIPTTYLFINRLGPDYEAGL 205
Query: 251 LGIGDASI-IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
++ +K ++E CG++ S +K +Y+++GDLG +A +R+ Q M KP PLT+ +VF
Sbjct: 206 ELGLGENLLMKTISETCGKSMSQIKLKYKDIGDLGEIAMGARNVQPTMFKPKPLTVGEVF 265
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK GKDSQ KK IK +L A E ++LIR L+SKLRIGLAE+T+L +L +
Sbjct: 266 KNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKTVLISLSK 325
Query: 370 AAVYNEQHSKPPPNIQSP---LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF 426
A + ++++ + P+ P LE A + ++ F +P YE ++ + L G+ NL C+
Sbjct: 326 ALLLHDENREDSPDKDVPMDVLESAQQKIRDAFCQVPNYEIVINSCLEHGIMNLDKYCTL 385
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERN 486
PGIP+ PMLAKPTK ++E++++FQ FT EYKYDGERAQ+H L DG++ IYSRN E
Sbjct: 386 RPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTMRIYSRNGENM 445
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
T ++P++ + + ++ +LDCE VA+D+++ KILPFQ LSTR RK+V L+D+KV
Sbjct: 446 TERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPFQVLSTRKRKDVELNDVKVK 505
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFDIL N + L+ + L+ RRE+L + PG FQ+AT +T+ +LDE+QKFLD +
Sbjct: 506 VCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYATQITTNNLDELQKFLDES 565
Query: 607 VDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
V+ SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+E +GDSLDL + A++GRGKRTG
Sbjct: 566 VNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYYGRGKRTG 625
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
YG FLL CY+ + EF++ CKIGTGFS+ ML+ L +I P+ + F + PD
Sbjct: 626 TYGGFLLGCYNQDTGEFETCCKIGTGFSDEMLQLLHDRLTPTIIDGPKATFVFDSSAEPD 685
Query: 726 VWFEPT 731
VWFEPT
Sbjct: 686 VWFEPT 691
>gi|50554875|ref|XP_504846.1| YALI0F01034p [Yarrowia lipolytica]
gi|49650716|emb|CAG77648.1| YALI0F01034p [Yarrowia lipolytica CLIB122]
Length = 738
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/545 (47%), Positives = 377/545 (69%), Gaps = 6/545 (1%)
Query: 192 PFIFLSLV--FDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
P ++ ++V F+ I T R+ IT + +V+++ P+ + VVYL N++ P +EGL
Sbjct: 131 PLLYRTIVDTFEKIEATTKRLEITAHCAALFLSVLKSHPQMMATVVYLCINRLGPDYEGL 190
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G++ ++K++AE+ GRT ++VK +YQ++GDLG VA++S+S+Q M KP+PL VF
Sbjct: 191 ELGLGESLLMKSIAESTGRTPAYVKTEYQKLGDLGKVAQSSKSNQRAMFKPEPLKAANVF 250
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
DTFR IA+ GKDSQ K N IK ++ A E +++IR L+ KLRIGLAE+++L +L Q
Sbjct: 251 DTFREIAQTTGKDSQNAKINMIKRMMGACQGNEAKFIIRSLEGKLRIGLAEKSVLVSLSQ 310
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A V E +K + ++++ VF LP Y I+ A+L +G+ LS TC + G
Sbjct: 311 AFVTFEAENKGKKVNPDDITAGEEMIRDVFCQLPNYALIIDAILENGIMRLSETCKISTG 370
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
+P+ PMLAKPTK +SE++++FQD EFTCEYKYDGERAQIH E G + +YSRN+E T +
Sbjct: 371 VPLKPMLAKPTKSISEVLDRFQDTEFTCEYKYDGERAQIHKTESGEMFVYSRNSEDMTVR 430
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PD+V + + + +SF+LDCE VA+DR++ KILPFQ LSTR RKNV+ +I V VCI
Sbjct: 431 YPDLVSIIPKFAGEA-KSFILDCEAVAWDRKQNKILPFQVLSTRKRKNVNEEEITVRVCI 489
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+AFDILY NG+ LL L RR+ L ++F E PG F FA ++ + +++EIQ FLD ++
Sbjct: 490 FAFDILYLNGESLLTLPLAERRQKLKEAFTEVPGEFLFAKSMDTSNVEEIQTFLDQSIKD 549
Query: 610 SCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
SCEGL++K ++ +++ YEPSKRS NWLK+KKDYI+ IGDSLDLV + + G+GKR+ YG
Sbjct: 550 SCEGLMVKLLEGKESGYEPSKRSRNWLKVKKDYIDGIGDSLDLVILGGYFGKGKRSQWYG 609
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTIS--PDV 726
AFLL Y+ ++EEF+++CK TGFSE ML++ L+ VI P + T + PDV
Sbjct: 610 AFLLGVYNQDSEEFETVCKTATGFSEEMLQKMYDKLKPTVIETPHSDVSYDSTPANLPDV 669
Query: 727 WFEPT 731
WF+P+
Sbjct: 670 WFDPS 674
>gi|347840149|emb|CCD54721.1| hypothetical protein [Botryotinia fuckeliana]
Length = 923
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 268/586 (45%), Positives = 383/586 (65%), Gaps = 41/586 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F ++ T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 257 WKPGEPVPYAALCTTFSLVEMTTKRLVIAAHCSLFLRQVLRLTPDDLLPTVLLMINKLAA 316
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR S +K +E+GDLGLVA SRS+Q +M KP PLT
Sbjct: 317 DYAGIELGIGESLIMKAIGESTGRNLSVIKNDQKEIGDLGLVAVKSRSNQPVMFKPKPLT 376
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA---------------TDCEPQYLIRL 349
I V + IA G +Q +K + IK LL AA E +Y++R
Sbjct: 377 IRGVLKSLIDIATMQGNGAQGRKVDGIKKLLSAADAHSSGKVDITKDKGGASEAKYIVRF 436
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAK---IVKQVFSVLPVYE 406
L+ KLR+GLAE+T+L +L QA V +E +K + S E+ AK I+K V S LP Y+
Sbjct: 437 LEGKLRLGLAEKTVLVSLAQAMVCHEIEAKGSGKVPS-TEQMAKGESILKAVHSSLPSYD 495
Query: 407 KIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
I+PA+L G++NL + C PG+P+ PMLAKPTK ++E++++F++ FTCEYKYDGERA
Sbjct: 496 VIIPAMLEHGIFNLKDNCKLQPGVPLKPMLAKPTKAITEVLDRFENQTFTCEYKYDGERA 555
Query: 467 QIHYL-------------------EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRS 507
QIHY+ + G I+SRN+E + K+PD++ ++ K +S
Sbjct: 556 QIHYVSKDSSKQYLGATPAAAKSSDGGLAAIFSRNSEDLSKKYPDILGKLNTWVKEDTKS 615
Query: 508 FVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQL 567
FVLDCE VA+D ++K+LPFQ L TR +K+V + D+KV VC++AFD+L+ NG+ ++++ L
Sbjct: 616 FVLDCETVAWDTVEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLFLNGEAVVEKSL 675
Query: 568 RVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYE 626
R RR L+++F+ G FQFAT++ ++DEIQ FLD +V ASCEGL++K +D ++ YE
Sbjct: 676 RERRALLHEAFQPVEGEFQFATSMNGQEIDEIQTFLDDSVKASCEGLMVKMLDGTESGYE 735
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
PSKRS NWLK+KKDY+ IGDSLDLV + A++GRGKRT VYGAFLLAC++ + +++IC
Sbjct: 736 PSKRSRNWLKIKKDYLSGIGDSLDLVVLGAYYGRGKRTSVYGAFLLACHNPQTDTYETIC 795
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
IGTGFSE +LEE + L + VI +P+P+Y + PDVWFEP
Sbjct: 796 NIGTGFSEQVLEELYAQLSAIVIDRPKPFYSHSSGNQHQPDVWFEP 841
>gi|366989161|ref|XP_003674348.1| hypothetical protein NCAS_0A14110 [Naumovozyma castellii CBS 4309]
gi|342300211|emb|CCC67969.1| hypothetical protein NCAS_0A14110 [Naumovozyma castellii CBS 4309]
Length = 753
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/544 (47%), Positives = 371/544 (68%), Gaps = 5/544 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE-GL 249
+P+ + +F I + + R+ I + + +M+ P++L+PV YL NK+ P +E GL
Sbjct: 149 IPYREVCNLFQEIESTSSRLAIIKLCSDFFIKIMKENPQNLIPVTYLFINKLGPDYEPGL 208
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G+ ++K ++E+CG++ + V+ +Y+E+GDLG +A +R+ Q M KP PLT+ +VF
Sbjct: 209 ELGLGEGLLMKTISESCGKSLAQVRNKYRELGDLGQIAMDARNVQPTMFKPKPLTVGEVF 268
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
+ RLIAK GKDSQ +K IK +L A E ++LIR L+SKLRIGLAE+T+L +L +
Sbjct: 269 ENLRLIAKSEGKDSQTRKIKLIKRMLTACEGTEAKFLIRSLESKLRIGLAEKTVLISLSK 328
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + +E +++ LE A + ++ F +P YE ++ + L G+ L CS PG
Sbjct: 329 ALLVHECKDNKDFDMEL-LETAEQKIRDAFCQVPNYEIVINSCLKYGIMELETHCSLRPG 387
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PMLAKPTK ++EI+++FQ FT EYKYDGERAQ+H L DG++ IYSRN E T +
Sbjct: 388 IPLKPMLAKPTKAINEILDRFQGEIFTSEYKYDGERAQVHLLSDGTMRIYSRNGENMTER 447
Query: 490 FPDVVLAVSRLKKPSVRS-FVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVC 548
+P++ + + P V S +LDCE VA+D E+ KILPFQ LSTR RK+V L D+KV VC
Sbjct: 448 YPEIHIR-DFIADPLVTSTLILDCEAVAWDNEQNKILPFQVLSTRKRKDVDLKDVKVKVC 506
Query: 549 IYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVD 608
++AFDIL N + L+ + LR RR+ L + + G FQ+AT +TS +LDE+QKFLD +V
Sbjct: 507 LFAFDILCHNDEKLINKSLRERRQILQEVTKSVTGEFQYATEMTSSNLDELQKFLDQSVH 566
Query: 609 ASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
SCEGL++K +D ++ YEPSKRS NWLKLKKDY+E IGDSLDL I A++GRGKRTG+Y
Sbjct: 567 DSCEGLMVKMLDGIESHYEPSKRSRNWLKLKKDYLEGIGDSLDLCVIGAYYGRGKRTGMY 626
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVW 727
G FLL CY+ + EF++ CKIGTGFS+ ML++ + L V+ P+ + + + PDVW
Sbjct: 627 GGFLLGCYNQDTGEFETCCKIGTGFSDEMLQQLYTRLTPTVLDGPKATFVYDSSAEPDVW 686
Query: 728 FEPT 731
FEPT
Sbjct: 687 FEPT 690
>gi|449551128|gb|EMD42092.1| hypothetical protein CERSUDRAFT_110637 [Ceriporiopsis subvermispora
B]
Length = 841
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 255/555 (45%), Positives = 370/555 (66%), Gaps = 10/555 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNM-LRTVMETTPED---LVPVVYLAAN 240
W+ G+ VP+ L+ VF +I T R+ T ++ L + + P D L+ VYL N
Sbjct: 206 WKTGDPVPYAALAKVFSLIEATTKRLEKTSLLTAFFLLVIRRSAPGDTQSLLQAVYLCIN 265
Query: 241 KIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
+++P + G+ELGIG++ +IKA+ E+ GR+ + VK ++ GDLGLVA S++SQ + KP
Sbjct: 266 RLSPDYVGVELGIGESLLIKAIGESTGRSLAVVKADLKKEGDLGLVAMNSKNSQKTLFKP 325
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
PLT+ VF+ + IA G SQ KK + I LL A + E +Y+IR L+ KLRIG AE
Sbjct: 326 KPLTLPFVFNNLKEIALSTGHSSQNKKVSIITKLLAACQESEAKYIIRSLEGKLRIGNAE 385
Query: 361 QTLLAALGQAAVYNEQHSKPPP----NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
QT+L AL A+ EQ + + L +A++I+K V+S LP Y+ ++PAL+ G
Sbjct: 386 QTVLVALAHASAIAEQERANKKINKEKLAARLPQASEIIKSVYSELPNYDLVIPALIEVG 445
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ L C TPG+P+ PMLAKPTK + E++++F++ FTCEYKYDGERAQ+H +EDG+V
Sbjct: 446 LDKLHEHCKLTPGVPLKPMLAKPTKAIGEVLDRFENKRFTCEYKYDGERAQVHLVEDGTV 505
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
++SRN+E + K+PD++ + K + +SFVLD E VA D++ ++PFQ LS R RK
Sbjct: 506 SVFSRNSEDMSKKYPDLMAQIPHCIKENTKSFVLDAEAVAIDKDTGSLMPFQELSRRKRK 565
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+V + DI+V VC++AFD+LY NG+PLL++ L RR+ L + F+ F FA +
Sbjct: 566 DVKVEDIQVRVCLFAFDLLYLNGEPLLRKSLAERRQLLREHFQPMHLEFDFAKSSDGETT 625
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+EIQ FL+ +V CEGL++K +D + + YEPS+RS+NWLKLKKDY+ +GDSLDLV +
Sbjct: 626 EEIQTFLEESVKDGCEGLMVKMLDGEPSFYEPSRRSVNWLKLKKDYLAGVGDSLDLVVVG 685
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
A++G+GKRT VYGAFLLAC+D++ EEFQ+ICKIGTGFSE +L++ SL+ + KPR
Sbjct: 686 AYYGKGKRTNVYGAFLLACWDADAEEFQTICKIGTGFSEEVLQKHYESLQPLEMTKPRGD 745
Query: 716 YRFADTISPDVWFEP 730
+ PDVWFEP
Sbjct: 746 IKIGGA-KPDVWFEP 759
>gi|302903161|ref|XP_003048798.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729732|gb|EEU43085.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 856
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 267/583 (45%), Positives = 371/583 (63%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
WE G VP+ L F +I T R++I + LR VM TP DL+P V L NK+AP
Sbjct: 192 WEAGTPVPYAALCTTFSLIEMTTKRLIIMEHCSLFLRQVMRLTPNDLLPTVLLMINKLAP 251
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ +K +E+GDLGLVA SRS+Q M KP LT
Sbjct: 252 DYAGIELGIGESLIMKAIGETTGRSLQVIKADQKEIGDLGLVAVKSRSTQRTMFKPKALT 311
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
I V IA G +Q +K + IK LL AA E +++IR
Sbjct: 312 IRGVHQGLMNIATVTGNGAQGRKVDGIKKLLAAADANSTGKVDITKDKGGPSEAKFIIRF 371
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
L+ KLR+GLAE+T+L +L QA V +E +K S +E+ I+K V+S LP Y+ I+
Sbjct: 372 LEGKLRLGLAEKTVLVSLAQAIVCHEADAKDKVPSTSDIEKGESILKTVYSELPSYDVII 431
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PA+L G+ L C+ PG+P+ PMLAKPTK ++E++++F+ FTCEYKYDGERAQIH
Sbjct: 432 PAILEHGIMKLRENCNLRPGVPLKPMLAKPTKAITEVLDRFEGQTFTCEYKYDGERAQIH 491
Query: 470 YLED-------------------GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
Y+ G I+SRN+E + K+PD++ +S KP +SFVL
Sbjct: 492 YVAKDAPQQLSQASQGAAKEVGAGVASIFSRNSEDLSKKYPDILAKLSTWVKPDTKSFVL 551
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D +++K+LPFQ L TR +K+V + D+KV VC++AFD+LY NG+ +++ LR R
Sbjct: 552 DCETVAWDVDEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLYLNGEAVVERALRER 611
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSK 629
RE L +F G F FAT + +L+EIQ FLD +V ASCEGL++K +D R++ YEPSK
Sbjct: 612 RELLEAAFIPVEGEFAFATHMNGQELEEIQVFLDESVKASCEGLMVKMLDGRESGYEPSK 671
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ +GDSLDLV + A++G+GKRT VYGAFLLACY+ N++ ++++C IG
Sbjct: 672 RSRNWLKIKKDYLSGVGDSLDLVVLGAYYGKGKRTSVYGAFLLACYNPNSDTYETVCNIG 731
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRFAD--TISPDVWFEP 730
TGFSE +LE+ L I +P+P+Y + PDVWFEP
Sbjct: 732 TGFSEQVLEDLHKQLSEITIDRPKPFYSHSSGGQHQPDVWFEP 774
>gi|146416351|ref|XP_001484145.1| hypothetical protein PGUG_03526 [Meyerozyma guilliermondii ATCC
6260]
gi|146391270|gb|EDK39428.1| hypothetical protein PGUG_03526 [Meyerozyma guilliermondii ATCC
6260]
Length = 731
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 271/557 (48%), Positives = 366/557 (65%), Gaps = 13/557 (2%)
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVME-TTPEDLVPVVYLAANKIAPAH 246
G ++P+ L+ VF+ I E+ R+ IT IV + ++E ++P+ LV +VYL N++ P +
Sbjct: 112 GPKIPYAKLTEVFEKIEGESSRLAITAIVSQFFQEILEQSSPDKLVKIVYLFINRLGPDY 171
Query: 247 E-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTI 305
E LELG+G+ +IKA++E GR + +KK Y E+GDLG+VA+ SRS Q M +P L +
Sbjct: 172 EPDLELGLGETLLIKAISECYGRAPAKIKKDYHEVGDLGIVAQKSRSGQPTMFRPTSLDV 231
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA--TDCEPQYLIRLLQSKLRIGLAEQTL 363
VF+ IAK +GKDSQ KK I +L A E ++LIR L+ KLRIGLAE+T+
Sbjct: 232 DTVFENLTKIAKFSGKDSQGKKIGMINKMLTACDLKSNEAKFLIRSLEGKLRIGLAEKTV 291
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L AL QA V +E S L A IV++ FS P YE ++ GV+NL
Sbjct: 292 LIALAQAFVNHELSSSGKKINPEKLTSAEDIVREAFSRTPNYEVLIKKAAEFGVFNLLEH 351
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
C TPGIP+ PMLAKPTK +SE++++FQ +FTCEYKYDGERAQ+H LE G V IYSRN+
Sbjct: 352 CKLTPGIPLKPMLAKPTKSISEVLDRFQGEDFTCEYKYDGERAQVHLLETGEVRIYSRNS 411
Query: 484 ERNTGKFPDVV-----LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
E + ++PD++ ++ ++ + S VLDCE VA+DR KILPFQ LSTR RK+V
Sbjct: 412 EDMSQRYPDLISILKDFVKTQAEETKITSMVLDCEAVAWDRVNNKILPFQVLSTRKRKDV 471
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
DIKV +C++AFD+LY NG+PL+ + L RRE ++ + G FQFAT S +LDE
Sbjct: 472 DEKDIKVHICLFAFDLLYYNGEPLITKSLADRREIMHKHIDTIEGKFQFATAKNSSNLDE 531
Query: 599 IQKFLDAAVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAF 657
+Q FLD +V +CEGL++K + D+ YEPSKRS NWLKLKKDY+ +GDSLDLV I A+
Sbjct: 532 LQAFLDQSVKDACEGLMVKMLHGPDSYYEPSKRSRNWLKLKKDYLAGVGDSLDLVVIGAY 591
Query: 658 HGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYR 717
GRGKRTG YG FLLA Y+ + E+++ CKIGTGFSE L + + L I +P+ YY
Sbjct: 592 IGRGKRTGGYGGFLLASYNQDTGEYETTCKIGTGFSEQDLADLHAKLSPTEIKQPKSYYV 651
Query: 718 FADTIS---PDVWFEPT 731
+ T S PDVWFEPT
Sbjct: 652 YDTTNSNAVPDVWFEPT 668
>gi|401626455|gb|EJS44401.1| cdc9p [Saccharomyces arboricola H-6]
Length = 757
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/546 (44%), Positives = 364/546 (66%), Gaps = 5/546 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ + VF+ I + R+ I I + +M+ + ++L+P YL N++ P +E
Sbjct: 148 IPYSEVCEVFNKIEAISSRLEIIRICSDFFIKIMQQSSKNLIPTTYLFINRLGPDYEAGL 207
Query: 251 LGIGDASI-IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
++ +K ++E+CG++ S +K +Y+E+GDLG +A +R+ Q M KP PLT+ +VF
Sbjct: 208 ELGLGENLLMKTISESCGKSMSQIKLKYKEIGDLGEIAMGARNVQPTMFKPKPLTVGEVF 267
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK GKDSQ KK +IK +L A E ++LIR L+SKLRIGLAE+T+L +L +
Sbjct: 268 KNLRTIAKTQGKDSQLKKMRQIKRMLTACQGVEAKFLIRSLESKLRIGLAEKTILISLSK 327
Query: 370 AAVYNEQHSKPPPNIQSP---LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF 426
A + ++Q + + P LE A + ++ F +P YE ++ + L G+ NL C+
Sbjct: 328 ALLLHDQSRENSRDKDIPMDVLETAQQKIRDAFCQVPNYEIVINSCLKHGIMNLDKYCTL 387
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERN 486
PGIP+ PMLAKPTK ++E++++FQ FT EYKYDGERAQ+H L DG++ IYSRN E
Sbjct: 388 RPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTMRIYSRNGENM 447
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
T ++P++ + + ++ +LDCE VA+D+E+ KILPFQ LSTR RK+V L+D+KV
Sbjct: 448 TERYPEIKITDFIEDLDATKNLILDCEAVAWDKEQGKILPFQVLSTRKRKDVELTDVKVK 507
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFDIL N + L+ + LR RR++L + PG F++AT + + +LDE+QKFLD +
Sbjct: 508 VCLFAFDILCHNDERLINQSLRERRDYLAKVTKVVPGEFEYATQIITNNLDELQKFLDDS 567
Query: 607 VDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
V+ SCEGL++K ++ ++ YEPSKRS NWLKLKKDY++ +GDSLDL + A++GRGKRTG
Sbjct: 568 VNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLDGVGDSLDLCVLGAYYGRGKRTG 627
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
YG FLL CY+ + EF++ CKIGTGFS+ ML++ L +I P+ + F + PD
Sbjct: 628 TYGGFLLGCYNQDTGEFETCCKIGTGFSDEMLQQLHERLTPTIIDGPKATFVFDSSAEPD 687
Query: 726 VWFEPT 731
VWFEPT
Sbjct: 688 VWFEPT 693
>gi|302509298|ref|XP_003016609.1| hypothetical protein ARB_04898 [Arthroderma benhamiae CBS 112371]
gi|291180179|gb|EFE35964.1| hypothetical protein ARB_04898 [Arthroderma benhamiae CBS 112371]
Length = 909
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 275/616 (44%), Positives = 368/616 (59%), Gaps = 72/616 (11%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F I T R++I LR V+ TP+DL+ V L NK+A
Sbjct: 210 WKAGDPVPYAALCTTFSHIEMTTKRLIILSHCALFLRQVLRLTPDDLLSTVQLMINKLAA 269
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP LT
Sbjct: 270 DYAGIELGIGESLIMKAIGESTGRSLAVIKADQNEIGDLGLVAAKSRSNQPTMFKPKALT 329
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-------------------TDCEPQY 345
+ V + IAK G SQEKK IK LL AA E ++
Sbjct: 330 VRGVHEGLLAIAKTHGTGSQEKKIAGIKKLLSAADADKTGKGSKTIDITKNRGGASEAKF 389
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH---SKPPPNIQSPLEEAAKIVKQVF--- 399
++R L+ KLR+GLAE+T+L AL A V +E KPP Q L + I+K V+
Sbjct: 390 IVRFLEGKLRLGLAERTVLVALAHAMVAHEAEMDGGKPPSTDQ--LAKGEDILKTVYRYA 447
Query: 400 ----------------SVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
S LP YE IVPA+L G++NL + C PG+P+ PMLAKPTK +
Sbjct: 448 PLLNIVGVVTELTLCDSELPSYEVIVPAMLKHGIFNLPDNCKLQPGVPLKPMLAKPTKSI 507
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLE------------------DGSVEIYSRNAER 485
SE++++F+ FTCEYKYDGERAQIHY+ +G I+SRN+E
Sbjct: 508 SEVLDRFEGKHFTCEYKYDGERAQIHYISQDTIKEYPAASTTLQKDGEGLCAIFSRNSED 567
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV 545
+ K+PD++ + KP +SFV+DCE VA+D +K+LPFQ L TR RK+V DIKV
Sbjct: 568 LSKKYPDILEKLEAWVKPGTQSFVVDCETVAWDTVNKKVLPFQQLMTRKRKDVKSEDIKV 627
Query: 546 DVCIYAFDILYRNG--------QPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD 597
VC++AFD+L+ NG QP +++ LR RR L+++F G F FA + DL+
Sbjct: 628 KVCVFAFDLLFLNGEKNDTDYTQPTVKKTLRERRALLHEAFVPVEGEFAFAQHGNTSDLE 687
Query: 598 EIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAA 656
EIQ LD +V ASCEGL++K +D D+ YEPSKRS NWLK+KKDY+ IGDSLDLV + A
Sbjct: 688 EIQTMLDESVKASCEGLMVKMLDTEDSGYEPSKRSRNWLKVKKDYLAGIGDSLDLVVLGA 747
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYY 716
+ GRGKRT VYGAFLLA Y+ + +++IC IGTGFSEA+LEE +L VI KP+P+Y
Sbjct: 748 YFGRGKRTSVYGAFLLAAYNPKTQNYETICNIGTGFSEALLEELHETLSPLVIDKPKPFY 807
Query: 717 RFADT--ISPDVWFEP 730
+ PDVWFEP
Sbjct: 808 SHSTVPKDQPDVWFEP 823
>gi|344301030|gb|EGW31342.1| hypothetical protein SPAPADRAFT_56206 [Spathaspora passalidarum
NRRL Y-27907]
Length = 715
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 267/554 (48%), Positives = 368/554 (66%), Gaps = 18/554 (3%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPED-LVPVVYLAANKIAPAHE- 247
++P+ L+ + + I NE+ R+ I I+ ++ + D L+ +VYL N++ P +E
Sbjct: 105 KIPYATLTSILEKIENESSRLKIISILSQFFEDILSASSIDKLIKIVYLVINRLGPDYEP 164
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITK 307
LELG+G+ +IKA++E GR S +K Y+E+GDLGLVA+ SRS Q M KP PL I
Sbjct: 165 DLELGLGETLLIKAISEGYGRATSKIKSDYKEVGDLGLVAQKSRSGQPTMFKPQPLDIDT 224
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQ-----YLIRLLQSKLRIGLAEQT 362
VF IA+ GKDSQ KK I +L A C+P+ +LIR L+ KLRIGLAE+T
Sbjct: 225 VFANLTQIARSTGKDSQSKKIGIINKMLTA---CDPKTNEAKFLIRSLEGKLRIGLAEKT 281
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL QA V +E+ K + L +A I+++ FS +P YE I+ GV+NL +
Sbjct: 282 VLIALAQAFVNHEKKHKVHAD---ELSKAEDIIREAFSQIPNYEVIIKNASEHGVFNLLD 338
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
TPGIP+ PMLAKPTK + E++++FQ EFTCEYKYDGERAQ+H L D SV IYSRN
Sbjct: 339 HVRLTPGIPVKPMLAKPTKSIGEVLDRFQHEEFTCEYKYDGERAQVHVLPDASVRIYSRN 398
Query: 483 AERNTGKFPDVVLAVSRL-KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLS 541
+E + ++PD++ ++ K+ + S +LDCE VA+DR + KILPFQ LSTR RK+V+
Sbjct: 399 SEDMSQRYPDLISIITEFSKQQELHSMILDCEAVAWDRVQNKILPFQVLSTRKRKDVNEK 458
Query: 542 DIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
DI V +C++AFD++Y NG+ L+ + L RRE LY++F G FQFAT S +LDE+Q
Sbjct: 459 DITVHICLFAFDLIYYNGESLITKSLAERREVLYNNFTTIEGKFQFATKKDSSNLDELQL 518
Query: 602 FLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
FLD +V SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+ +GDSLDLV I A++GR
Sbjct: 519 FLDQSVKDSCEGLMVKMLNGTESFYEPSKRSRNWLKLKKDYLAGVGDSLDLVVIGAYNGR 578
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD 720
GKRTG YG FLLA Y+ ++ E ++ CKIGTGFS+ L + L IP PRP++ +
Sbjct: 579 GKRTGTYGGFLLASYNQDSGELETTCKIGTGFSDEDLTNLYNKLHPTEIPNPRPHFVYDS 638
Query: 721 TIS---PDVWFEPT 731
T S PDVWFEP+
Sbjct: 639 TNSNAAPDVWFEPS 652
>gi|3515|emb|CAA27005.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 755
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/546 (44%), Positives = 364/546 (66%), Gaps = 5/546 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ + VF+ I + R+ I I + +M+ + ++++P YL N++ P +E
Sbjct: 146 IPYSEVCEVFNKIEAISSRLEIIRICSDFFIKIMKQSSKNVIPTTYLFINRLGPDYEAGL 205
Query: 251 LGIGDASI-IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
++ +K ++E CG++ S +K +Y+++GDLG +A +R+ Q M KP PLT+ +VF
Sbjct: 206 ELGLGENLLMKTISETCGKSMSQIKLKYKDIGDLGEIAMGARNVQPTMFKPKPLTVGEVF 265
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK GKDSQ KK IK +L A E ++LIR L+SKLRIGLAE+T+L +L +
Sbjct: 266 KNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKTVLISLSK 325
Query: 370 AAVYNEQHSKPPPNIQSP---LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF 426
A + ++++ + P+ P LE A + ++ F +P YE ++ + L G+ NL C+
Sbjct: 326 ALLLHDENREDSPDKDVPMDVLESAQQKIRDAFCQVPNYEIVINSCLEHGIMNLDKYCTL 385
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERN 486
PGIP+ PMLAKPTK ++E++++FQ FT EYKYDGERAQ+H L DG++ IYSRN E
Sbjct: 386 RPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTMRIYSRNGENM 445
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
T ++P++ + + ++ +LDCE VA+D+++ KILPFQ LSTR RK+V L+D+KV
Sbjct: 446 TERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPFQVLSTRKRKDVELNDVKVK 505
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFDIL N + L+ + L+ RRE+L + PG FQ+AT +T+ +LDE+QKFLD +
Sbjct: 506 VCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYATQITTNNLDELQKFLDES 565
Query: 607 VDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
V+ SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+E +GDSLDL + A++GRGKRTG
Sbjct: 566 VNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYYGRGKRTG 625
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
YG FLL CY+ + EF++ CKIGTGFS+ ML+ L +I P+ + F + PD
Sbjct: 626 TYGGFLLGCYNQDTGEFETCCKIGTGFSDEMLQLLHDRLTPTIIDGPKATFVFDSSAEPD 685
Query: 726 VWFEPT 731
VWFEPT
Sbjct: 686 VWFEPT 691
>gi|365766695|gb|EHN08190.1| Cdc9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 732
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/546 (44%), Positives = 363/546 (66%), Gaps = 5/546 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ + VF+ I + R+ I I + +M+ + ++L+P YL N++ P +E
Sbjct: 123 IPYSEVCEVFNKIEAISSRLEIIRICSDFFIKIMKQSSKNLIPTTYLFINRLGPDYEAGL 182
Query: 251 LGIGDASI-IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
++ +K ++E CG++ S +K +Y+++GDLG +A +R+ Q M KP PLT+ +VF
Sbjct: 183 ELGLGENLLMKTISETCGKSMSQIKLKYKDIGDLGEIAMGARNVQPTMFKPKPLTVGEVF 242
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK GKDSQ KK IK +L A E ++LIR L+SKLRIGLAE+T+L +L +
Sbjct: 243 KNLRXIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKTVLISLSK 302
Query: 370 AAVYNEQHSKPPPNIQSP---LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF 426
A + ++++ + P+ P LE A + ++ F +P YE ++ + L G+ NL C+
Sbjct: 303 ALLLHDENREDSPDKDVPMDVLESAQQKIRDAFCQVPNYEIVINSCLEHGIMNLDKYCTL 362
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERN 486
PGIP+ PMLAKPTK ++E++++FQ FT EYKYDGERAQ H L DG++ IYSRN E
Sbjct: 363 RPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQXHLLNDGTMRIYSRNGENM 422
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
T ++P++ + + ++ +LDCE VA+D+++ KILPFQ LSTR RK+V L+D+KV
Sbjct: 423 TERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPFQVLSTRKRKDVELNDVKVK 482
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFDIL N + L+ + L+ RRE+L + PG FQ+AT +T+ +LDE+QKFLD +
Sbjct: 483 VCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYATQITTNNLDELQKFLDES 542
Query: 607 VDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
V+ SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+E +GDSLDL + A++GRGKRTG
Sbjct: 543 VNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYYGRGKRTG 602
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
YG FLL CY+ + EF++ CKIGTGFS+ ML+ L +I P+ + F + PD
Sbjct: 603 TYGGFLLGCYNQDTGEFETCCKIGTGFSDEMLQLLHDRLTPTIIDGPKATFVFDSSAEPD 662
Query: 726 VWFEPT 731
VWFEPT
Sbjct: 663 VWFEPT 668
>gi|409083536|gb|EKM83893.1| hypothetical protein AGABI1DRAFT_51454 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 822
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 253/555 (45%), Positives = 369/555 (66%), Gaps = 10/555 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE----DLVPVVYLAAN 240
W+ G+ VP+ L+ F +I + T R+ + + L V++ + + L+ VYL N
Sbjct: 190 WKVGQPVPYAALAKTFSLIESTTKRLEKNSYLTSFLLLVIQRSAKGDWNSLLQTVYLCIN 249
Query: 241 KIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
+++P +EG+ELGIG++ +IKA+AE+ GR+ + +K + GDLGLVA S++SQ + KP
Sbjct: 250 RLSPDYEGIELGIGESLLIKAIAESTGRSLAVIKADLKREGDLGLVAMNSKTSQKTLFKP 309
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
PLT+ VF + IA +G SQ KK + I LL A E +Y+IR L+ KLRIG AE
Sbjct: 310 KPLTLPFVFSHLKDIATTSGHSSQAKKVSIITKLLAACQGLEAKYIIRSLEGKLRIGNAE 369
Query: 361 QTLLAALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
+++L A+ A V E+ + + LEE+ +K V+S LP Y+K++PALL G
Sbjct: 370 RSVLVAIANAVVLAEKEASNKNWSNEKLIKRLEESTLRIKSVYSELPSYDKVIPALLNVG 429
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ L C TPG+P+ PMLAKPTK + E++++F++ FTCEYKYDGERAQ+H LEDGSV
Sbjct: 430 IDGLEEVCKLTPGVPLKPMLAKPTKAIGEVLDRFENQHFTCEYKYDGERAQVHKLEDGSV 489
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
++SRN+E + K+PD+V + + K + +SFVLD E VA DR+ K++PFQ LS R RK
Sbjct: 490 AVFSRNSEDMSKKYPDLVEQLPKCIKETTKSFVLDAEAVAIDRKTGKLMPFQELSRRKRK 549
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+V + DI+V VC++AFD+LY NG+PLL++ L RR+ L + F+ G F FA S +
Sbjct: 550 DVKVEDIQVRVCLFAFDLLYLNGEPLLRKPLSERRKLLLEHFQPIDGEFNFAKASNSQSV 609
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+EIQ FL+ +V CEGL++K +D + + YEPS+RS+NWLKLKKDY+ +GDSLDLV +
Sbjct: 610 EEIQAFLEESVKDGCEGLMVKMLDGEPSFYEPSRRSVNWLKLKKDYLAGVGDSLDLVVVG 669
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
++G+GKRT VYGAFLLAC+D ++EE+Q+ICKIGTGFS+ +L+ + L+ + K R
Sbjct: 670 GYYGKGKRTNVYGAFLLACFDPDSEEYQTICKIGTGFSDEILQSHYNELKPLELEKARGD 729
Query: 716 YRFADTISPDVWFEP 730
PD+WFEP
Sbjct: 730 VNIGGA-KPDIWFEP 743
>gi|392300662|gb|EIW11753.1| Cdc9p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 732
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/546 (44%), Positives = 363/546 (66%), Gaps = 5/546 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ + VF+ I + R+ I I + +M+ + ++L+P YL N++ P +E
Sbjct: 123 IPYSEVCEVFNKIEAISSRLEIIRICSDFFIKIMKQSSKNLIPTTYLFINRLGPDYEAGL 182
Query: 251 LGIGDASI-IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
++ +K ++E CG++ S +K +Y+++GDLG +A +R+ Q M KP PLT+ +VF
Sbjct: 183 ELGLGENLLMKTISETCGKSMSQIKLKYKDIGDLGEIAMGARNVQPTMFKPKPLTVGEVF 242
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK GKDSQ KK IK +L A E ++LIR L+SKLRIGLAE+T+L +L +
Sbjct: 243 KNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKTVLISLSK 302
Query: 370 AAVYNEQHSKPPPNIQSP---LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF 426
A + ++++ + P+ P LE A + ++ F +P YE ++ + L G+ NL C+
Sbjct: 303 ALLLHDENREDSPDKDVPMDVLESAQQKIRDAFCQVPNYEIVINSCLEHGIMNLDKYCTL 362
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERN 486
PGIP+ PMLAKPTK ++E++++FQ FT EYKYDGERAQ H L DG++ IYSRN E
Sbjct: 363 RPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQAHLLNDGTMRIYSRNGENM 422
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
T ++P++ + + ++ +LDCE VA+D+++ KILPFQ LSTR RK+V L+D+KV
Sbjct: 423 TERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPFQVLSTRKRKDVELNDVKVK 482
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFDIL N + L+ + L+ RRE+L + PG FQ+AT +T+ +LDE+QKFLD +
Sbjct: 483 VCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYATQITTNNLDELQKFLDES 542
Query: 607 VDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
V+ SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+E +GDSLDL + A++GRGKRTG
Sbjct: 543 VNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYYGRGKRTG 602
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
YG FLL CY+ + EF++ CKIGTGFS+ ML+ L +I P+ + F + PD
Sbjct: 603 TYGGFLLGCYNQDTGEFETCCKIGTGFSDEMLQLLHDRLTPTIIDGPKATFVFDSSAEPD 662
Query: 726 VWFEPT 731
VWFEPT
Sbjct: 663 VWFEPT 668
>gi|323355897|gb|EGA87709.1| Cdc9p [Saccharomyces cerevisiae VL3]
Length = 690
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/546 (44%), Positives = 363/546 (66%), Gaps = 5/546 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ + VF+ I + R+ I I + +M+ + ++L+P YL N++ P +E
Sbjct: 81 IPYSEVCEVFNKIEAISSRLEIIRICSDFFIKIMKQSSKNLIPTTYLFINRLGPDYEAGL 140
Query: 251 LGIGDASI-IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
++ +K ++E CG++ S +K +Y+++GDLG +A +R+ Q M KP PLT+ +VF
Sbjct: 141 ELGLGENLLMKTISETCGKSMSQIKLKYKDIGDLGEIAMGARNVQPTMFKPKPLTVGEVF 200
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK GKDSQ KK IK +L A E ++LIR L+SKLRIGLAE+T+L +L +
Sbjct: 201 KNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKTVLISLSK 260
Query: 370 AAVYNEQHSKPPPNIQSP---LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF 426
A + ++++ + P+ P LE A + ++ F +P YE ++ + L G+ NL C+
Sbjct: 261 ALLLHDENREDSPDKDVPMDVLESAQQKIRDAFCQVPNYEIVINSCLEHGIMNLDKYCTL 320
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERN 486
PGIP+ PMLAKPTK ++E++++FQ FT EYKYDGERAQ H L DG++ IYSRN E
Sbjct: 321 RPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQXHLLNDGTMRIYSRNGENM 380
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
T ++P++ + + ++ +LDCE VA+D+++ KILPFQ LSTR RK+V L+D+KV
Sbjct: 381 TERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPFQVLSTRKRKDVELNDVKVK 440
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFDIL N + L+ + L+ RRE+L + PG FQ+AT +T+ +LDE+QKFLD +
Sbjct: 441 VCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYATQITTNNLDELQKFLDES 500
Query: 607 VDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
V+ SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+E +GDSLDL + A++GRGKRTG
Sbjct: 501 VNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYYGRGKRTG 560
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
YG FLL CY+ + EF++ CKIGTGFS+ ML+ L +I P+ + F + PD
Sbjct: 561 TYGGFLLGCYNQDTGEFETCCKIGTGFSDEMLQLLHDRLTPTIIDGPKATFVFDSSAEPD 620
Query: 726 VWFEPT 731
VWFEPT
Sbjct: 621 VWFEPT 626
>gi|426201422|gb|EKV51345.1| hypothetical protein AGABI2DRAFT_214235 [Agaricus bisporus var.
bisporus H97]
Length = 822
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 253/555 (45%), Positives = 369/555 (66%), Gaps = 10/555 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE----DLVPVVYLAAN 240
W+ G+ VP+ L+ F +I + T R+ + + L V++ + + L+ VYL N
Sbjct: 190 WKVGQPVPYAALAKTFSLIESTTKRLEKNSYLTSFLLLVIQRSAKGDWNSLLQTVYLCIN 249
Query: 241 KIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
+++P +EG+ELGIG++ +IKA+AE+ GR+ + +K + GDLGLVA S++SQ + KP
Sbjct: 250 RLSPDYEGIELGIGESLLIKAIAESTGRSLAVIKADLKREGDLGLVAMNSKTSQKTLFKP 309
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
PLT+ VF + IA +G SQ KK + I LL A E +Y+IR L+ KLRIG AE
Sbjct: 310 KPLTLPFVFSHLKDIATTSGHSSQAKKVSIITKLLAACQGLEAKYIIRSLEGKLRIGNAE 369
Query: 361 QTLLAALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
+++L A+ A V E+ + + LEE+ +K V+S LP Y+K++PALL G
Sbjct: 370 RSVLVAIANAVVLAEKEASNRNWSNEKLIKRLEESTLRIKSVYSELPNYDKVIPALLDVG 429
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ L C TPG+P+ PMLAKPTK + E++++F++ FTCEYKYDGERAQ+H LEDGSV
Sbjct: 430 IDGLEEVCKLTPGVPLKPMLAKPTKAIGEVLDRFENQHFTCEYKYDGERAQVHKLEDGSV 489
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
++SRN+E + K+PD+V + + K + +SFVLD E VA DR+ K++PFQ LS R RK
Sbjct: 490 AVFSRNSEDMSKKYPDLVEQLPKCIKETTKSFVLDAEAVAIDRKTGKLMPFQELSRRKRK 549
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+V + DI+V VC++AFD+LY NG+PLL++ L RR+ L + F+ G F FA S +
Sbjct: 550 DVKVEDIQVRVCLFAFDLLYLNGEPLLRKPLSERRKLLLEHFQPIDGEFNFAKASNSQSV 609
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+EIQ FL+ +V CEGL++K +D + + YEPS+RS+NWLKLKKDY+ +GDSLDLV +
Sbjct: 610 EEIQAFLEESVKDGCEGLMVKMLDGEPSFYEPSRRSVNWLKLKKDYLAGVGDSLDLVVVG 669
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
++G+GKRT VYGAFLLAC+D ++EE+Q+ICKIGTGFS+ +L+ + L+ + K R
Sbjct: 670 GYYGKGKRTNVYGAFLLACFDPDSEEYQTICKIGTGFSDEILQSHYNELKPLELEKARGD 729
Query: 716 YRFADTISPDVWFEP 730
PD+WFEP
Sbjct: 730 VNIGGA-KPDIWFEP 743
>gi|341899398|gb|EGT55333.1| hypothetical protein CAEBREN_01380 [Caenorhabditis brenneri]
Length = 777
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/550 (46%), Positives = 357/550 (64%), Gaps = 7/550 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W KG +VPF +L + I + +G+ + D + V++ +PEDL VY++ N++ P
Sbjct: 13 WAKGTKVPFKEFALTLEKIEDLSGKKKV-DELAQFFTKVLDFSPEDLTSCVYMSVNQLGP 71
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
++EGLELG+ + S+IKA+A+A GRTES +K+ + GDLG VA+ SRS+Q M+ P LT
Sbjct: 72 SYEGLELGVAENSLIKAVAKATGRTESKIKEDLRIKGDLGTVAQQSRSNQKMLAVPKALT 131
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ VF IAK +G + KK + I LL++ E ++L+R+L K+RIGL EQ++L
Sbjct: 132 VPAVFSKLTEIAKHSGNSAMNKKVDAISGLLISCQGIEARFLVRMLAGKMRIGLGEQSVL 191
Query: 365 AALGQA---AVYNEQHSKPPPNIQSPLEEA-AKIVKQVFSVLPVYEKIVPALLTDGVWNL 420
+ALG A A E K L++A K VK + P Y +++ L +GV L
Sbjct: 192 SALGHAFTLAKIAESEKKVSGEKLDSLKDANVKRVKTAYCECPNYNRLIEVALAEGVEAL 251
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
C TPGIP+ PMLA PTKG+ EI+ +F++ TCE+KYDGER QIH EDGS+ IYS
Sbjct: 252 VEKCKLTPGIPLKPMLAHPTKGIDEIMRRFRNQTMTCEWKYDGERGQIHKREDGSIFIYS 311
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
RN E NT K+PD++ +S V SF++D E+VA D E ILPFQ LSTR RKN +
Sbjct: 312 RNQENNTTKYPDIIEKISTCIGDGVTSFIVDAEVVAID-ETGLILPFQVLSTRKRKNAT- 369
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
D V V ++ FD+LY NG+PL++E LR RRE L +F++ G F FAT++ + D DEI
Sbjct: 370 DDNGVKVGVFLFDLLYFNGEPLVREPLRKRRELLRQNFKKIEGSFYFATSVDTNDTDEIN 429
Query: 601 KFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
F D AV CEGL+IKT+D +ATYE S+RS +WLK+KKDY++ +GD+LDLV + A+ G
Sbjct: 430 SFFDEAVQNKCEGLMIKTLDTEATYEISRRSKSWLKMKKDYVDGVGDTLDLVVMGAYIGN 489
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD 720
GKRTGVYG +LL CY+ + EE++S+CKIGTGFS+ L E+ L+ + I K YY+F
Sbjct: 490 GKRTGVYGGYLLGCYNPSTEEYESVCKIGTGFSDDDLAEQFKLLQEEKIDKVPSYYQFDP 549
Query: 721 TISPDVWFEP 730
T+ PD F P
Sbjct: 550 TLKPDDIFSP 559
>gi|73852627|ref|YP_293911.1| putative DNA ligase [Emiliania huxleyi virus 86]
gi|72415343|emb|CAI65580.1| putative DNA ligase [Emiliania huxleyi virus 86]
Length = 622
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/557 (47%), Positives = 360/557 (64%), Gaps = 9/557 (1%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
VP+IFL+ F+ I ET R++I + N R V+ P L + L N IA HEG E
Sbjct: 18 VPYIFLASSFNDIEKETKRLVIIEHATNAFRAVIHNDPSSLFHTISLMTNTIAAVHEGFE 77
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
LGIGDA I+K L E ++ V+K + +GDLG VA++ +Q+ KP PLT T V++
Sbjct: 78 LGIGDAIIVKTLTETYMKSTETVRKDLKSLGDLGKVAESYAGAQATFVKPSPLTATHVYN 137
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
TFR IA +GKDS K+ IK LL++A+ E YL+R LQ K+RIG+AEQ++L A+ A
Sbjct: 138 TFRQIATTSGKDSMFTKRVVIKKLLLSASKLETLYLVRALQGKMRIGMAEQSILTAIAYA 197
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
V + + + L A + VKQ F LP Y ++V L+ G N S PG+
Sbjct: 198 YVMSNPGNIFDTKMTGKLSTAVEQVKQAFCELPDYGELVKTLMETGDLNRS---FIKPGV 254
Query: 431 PIGPMLAKPTKGVSEIVNK-FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
P+ PMLAKPT GV+E++++ + FTC++KYDG RAQIH EDG+V ++SRN E T
Sbjct: 255 PVKPMLAKPTNGVTEVMDRMLKSGRFTCDFKYDGMRAQIHMKEDGTVSVFSRNMESMTSS 314
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PDVV ++ + +SF++D E VA D + ILPFQ LSTR RK+ S +IKV VCI
Sbjct: 315 YPDVVNSIPSTLSNNTKSFIIDTEAVAVDGDGN-ILPFQVLSTRKRKDASTDEIKVKVCI 373
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
YAFDILY NG+ L++ L RR+ LY +F + F+FAT++ +EI K L+ AV +
Sbjct: 374 YAFDILYYNGESTLKKTLAQRRDILYTAFSQVGNSFKFATSMNPSTEEEIAKMLNHAVLS 433
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EGL++K++D +++YEPSKRSLNWLKLKKDY+ +GDS DLVPIA + GRGKRTGVYGA
Sbjct: 434 KTEGLMVKSLDDNSSYEPSKRSLNWLKLKKDYLAGMGDSCDLVPIAGYTGRGKRTGVYGA 493
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP-KPRPYYRFAD--TISPDV 726
+LLA YD + E FQS+CKIGTGFS+ L + S SL ++P KP YY AD ++ PDV
Sbjct: 494 YLLAVYDPDEEVFQSVCKIGTGFSDEDLIQLSDSLTPHIVPQKPSDYY-VADVPSLKPDV 552
Query: 727 WFEPTERPETSNSPASI 743
WF PT+ E ++ SI
Sbjct: 553 WFSPTQVWEVLSADLSI 569
>gi|351702584|gb|EHB05503.1| DNA ligase 1 [Heterocephalus glaber]
Length = 874
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 252/585 (43%), Positives = 365/585 (62%), Gaps = 62/585 (10%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW +G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 243 YHPIEDACWSRGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 302
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++ P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 303 LTLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAVEKGDVGLVAENSRSTQRL 362
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT VF FR IA+ G + KK + IK L VA E +++ R L +LR+
Sbjct: 363 MLPPPPLTSAGVFSKFRDIAQLTGSAAVTKKMDIIKGLFVACRHSEARFIARALSGRLRL 422
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 423 GLAEQSVLAALSQAVSLTPPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 482
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P L G+ +L C +PG+P+ PMLA PT+GVSE++ +F++ FTCEYKYDG+
Sbjct: 483 LDRIIPVLQEHGLEHLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQ 542
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQI K PSV SF+LD E VA+DREK++I
Sbjct: 543 RAQI--------------------------------KLPSVTSFILDTEAVAWDREKKQI 570
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V ++I+V VC+YAFD+++ NG+ L+++ L RR+ L ++F E G
Sbjct: 571 QPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIFLNGESLVRQPLSQRRQLLRENFVETEGE 630
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D +ATYE +KRS NWLKLKKDY++
Sbjct: 631 FVFATSLDTKDMEQIAEFLEQSVKDSCEGLMVKTLDVNATYEIAKRSHNWLKLKKDYLDG 690
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK----------------- 687
+GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK
Sbjct: 691 VGDTLDLVVIGAYLGRGKRAGRYGGFLLAVYDEESEELQAICKLGTGFSDEQLEEHYQSL 750
Query: 688 -IGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
+GTGFS+ LEE SL++ V+P PRPY R ++PD W +P+
Sbjct: 751 QLGTGFSDEQLEEHYQSLQALVLPTPRPYVRADGAVAPDHWLDPS 795
>gi|320583128|gb|EFW97344.1| DNA ligase [Ogataea parapolymorpha DL-1]
Length = 706
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 261/556 (46%), Positives = 374/556 (67%), Gaps = 12/556 (2%)
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE------DLVPVVYLAANK 241
G+ +P+ L VF+ + E+GR+ +I M V++ + +LV V YL N+
Sbjct: 85 GKPIPYSKLCEVFEALEKESGRLKCIEIASEMFSHVLDVSENQEDQIRNLVEVNYLTINR 144
Query: 242 IAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD 301
+ P +EGLELG+G+ ++KALA GR+ +KK E GD+GLVA+ SRS QS+M KP
Sbjct: 145 VCPDYEGLELGLGETLLMKALATGTGRSMQQLKKDLGEYGDIGLVAQKSRSKQSLMFKPQ 204
Query: 302 PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQ 361
PLT+++VF + IA +G SQ KK I +L + E ++L+R L+ LRI AE+
Sbjct: 205 PLTVSQVFKNLKEIASMSGASSQNKKIAMINRMLTSCDSREAKFLMRSLEGTLRIQFAEK 264
Query: 362 TLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLS 421
+++ AL +A V +E + + L EA + +K+ FS P YE I+ + G NL
Sbjct: 265 SVVVALAKALVEHEMKQRGQKVTPAILSEAEEQMKEAFSQTPNYELIIETAIKYGTLNLM 324
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
+ C+ PGIP+ PMLAKPTK ++EI+N+F++ EF+CEYKYDGERAQ+H L D ++ +YSR
Sbjct: 325 DHCTLKPGIPLKPMLAKPTKSITEILNQFENQEFSCEYKYDGERAQVHLLPDRTLRVYSR 384
Query: 482 NAERNTGKFPDVVLAVSRLKK--PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVS 539
++E T ++PD++ + L++ P V+SF+LDCE VA+D++++KILPFQ LSTR RK+V
Sbjct: 385 SSENMTQRYPDLIPVMEELQRLNPEVKSFILDCECVAWDKKQEKILPFQILSTRKRKDVK 444
Query: 540 LSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEI 599
DI V VC++AFDIL NG+ LLQ+ L+ RR+++YD+ + PG F+F+ L S DLD I
Sbjct: 445 EEDITVQVCLFAFDILLYNGESLLQKSLKERRQYMYDNLKIIPGKFRFSEKLDSSDLDVI 504
Query: 600 QKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFH 658
KFLD +V SCEGL+IKT++ ++ YEPSKRS NWLKLKKDY+E +GDSLDLV I A+
Sbjct: 505 TKFLDQSVKDSCEGLMIKTLNGTNSLYEPSKRSRNWLKLKKDYLEGVGDSLDLVVIGAYV 564
Query: 659 GRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF 718
G+GKRTG YG FLLA Y+ ++ EF++ICKIGTGFSE ML L+ + KP+ + +
Sbjct: 565 GKGKRTGGYGGFLLASYNPDSGEFEAICKIGTGFSEEMLASLFEKLKPTQLDKPKASFVY 624
Query: 719 ADT---ISPDVWFEPT 731
T +PD+WFEPT
Sbjct: 625 DKTNPRAAPDIWFEPT 640
>gi|341899425|gb|EGT55360.1| hypothetical protein CAEBREN_25255 [Caenorhabditis brenneri]
Length = 777
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 255/550 (46%), Positives = 356/550 (64%), Gaps = 7/550 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W KG +VPF +L + I + +G+ + D + V++ +PEDL VY++ N++ P
Sbjct: 13 WAKGTKVPFKEFALTLEKIEDLSGKKKV-DELAQFFTKVLDFSPEDLTSCVYMSVNQLGP 71
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
++EGLELG+ + S+IKA+A+A GRTES +K+ + GDLG VA+ SRS+Q M+ P LT
Sbjct: 72 SYEGLELGVAENSLIKAVAKATGRTESKIKEDLRIKGDLGTVAQQSRSNQKMLAVPKALT 131
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ VF IAK +G + KK + I LL++ E ++L+R+L K+RIGL EQ++L
Sbjct: 132 VPAVFSKLTEIAKHSGNSAMNKKVDAISGLLISCQGIEARFLVRMLAGKMRIGLGEQSVL 191
Query: 365 AALGQA---AVYNEQHSKPPPNIQSPLEEA-AKIVKQVFSVLPVYEKIVPALLTDGVWNL 420
+ALG A A E K L++ K VK + P Y +++ L +GV L
Sbjct: 192 SALGHAFTLAKIAESEKKVSGEKLDSLKDVNVKRVKTAYCECPNYNRLIEVALAEGVEAL 251
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
C TPGIP+ PMLA PTKG+ EI+ +F++ TCE+KYDGER QIH EDGS+ IYS
Sbjct: 252 VEKCKLTPGIPLKPMLAHPTKGIDEIMRRFRNQTMTCEWKYDGERGQIHKREDGSIFIYS 311
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
RN E NT K+PD++ +S V SF++D E+VA D E ILPFQ LSTR RKN +
Sbjct: 312 RNQENNTTKYPDIIEKISTCIGDGVTSFIVDAEVVAID-ETGLILPFQVLSTRKRKNAT- 369
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
D V V ++ FD+LY NG+PL++E LR RRE L +F++ G F FAT++ + D DEI
Sbjct: 370 DDNGVKVGVFLFDLLYFNGEPLVREPLRKRRELLRQNFKKIEGSFYFATSVDTNDTDEIN 429
Query: 601 KFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
F D AV CEGL+IKT+D +ATYE S+RS +WLK+KKDY++ +GD+LDLV + A+ G
Sbjct: 430 SFFDEAVQNKCEGLMIKTLDTEATYEISRRSKSWLKMKKDYVDGVGDTLDLVVMGAYIGN 489
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD 720
GKRTGVYG +LL CY+ + EE++S+CKIGTGFS+ L E+ L+ + I K YY+F
Sbjct: 490 GKRTGVYGGYLLGCYNPSTEEYESVCKIGTGFSDDDLAEQFKLLQEEKIDKAPSYYQFDP 549
Query: 721 TISPDVWFEP 730
T+ PD F P
Sbjct: 550 TLKPDDIFSP 559
>gi|294654642|ref|XP_456702.2| DEHA2A08602p [Debaryomyces hansenii CBS767]
gi|199429037|emb|CAG84658.2| DEHA2A08602p [Debaryomyces hansenii CBS767]
Length = 749
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 273/571 (47%), Positives = 369/571 (64%), Gaps = 13/571 (2%)
Query: 173 KAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVME-TTPEDL 231
K E + + C E ++ + L+ +F+ I E+ R+ IT + ++E T + L
Sbjct: 117 KLSEKEQEKHTCTEASSKIHYSELTELFEKIEQESSRLKITAFISQFYYQILEHATSDKL 176
Query: 232 VPVVYLAANKIAPAHE-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKAS 290
V ++YL N++ P +E LELG+G+ +IKA++E GR S +KK YQE+GDLG+VA+ S
Sbjct: 177 VKIIYLCINRLGPDYEPDLELGLGETLLIKAISECYGRPPSKIKKDYQEVGDLGIVAQKS 236
Query: 291 RSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA--TDCEPQYLIR 348
RS Q M KP L I VF+ IAK GKDSQ KK + I +L A E ++LIR
Sbjct: 237 RSGQPTMFKPTRLDIVTVFENLTKIAKSTGKDSQSKKISTINKMLTACEMKSNEAKFLIR 296
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ KLRIGLAE+T+L L QA V E S + + L +A I+++ FS +P YE I
Sbjct: 297 SLEGKLRIGLAEKTVLIGLAQAFVNYENKSNKKISPEK-LAQAEDIIREAFSRIPNYEII 355
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+ G++NL + C TPGIP+ PMLAKPTK VSEI+++FQ EFTCEYKYDGERAQ+
Sbjct: 356 ISNAYEHGIFNLLDYCILTPGIPLKPMLAKPTKSVSEILDRFQGEEFTCEYKYDGERAQV 415
Query: 469 HYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKK----PSVRSFVLDCEIVAYDREKQKI 524
H L G V IYSRN+E + ++PD++ + K S VLDCE VA+DRE KI
Sbjct: 416 HLLPTGEVRIYSRNSEDMSQRYPDLISIIKDFLKTQEISGKHSMVLDCEAVAWDRETNKI 475
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
LPFQ LSTR RK+V DIKV +C++AFD+LY N +PL+ L RR+ ++++ G
Sbjct: 476 LPFQVLSTRKRKDVEEKDIKVHICLFAFDLLYYNDKPLITTSLAERRKVMFENLRPIEGK 535
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIE 643
FQFAT + +LDE+Q FLD +V SCEGL++K M+ D+ YEPSKRS NWLKLKKDY+
Sbjct: 536 FQFATFKNTTNLDELQHFLDQSVKDSCEGLMVKMMNGTDSYYEPSKRSRNWLKLKKDYLA 595
Query: 644 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSS 703
+GDSLDLV I A+ G+GKRTG YG FLLA Y+ ++ E+++ CKIGTGFS+ L +
Sbjct: 596 GVGDSLDLVVIGAYIGKGKRTGSYGGFLLASYNQDSGEYETTCKIGTGFSDEDLVSIHAR 655
Query: 704 LRSKVIPKPRPYYRFADTIS---PDVWFEPT 731
L+ I +P+PYY + T S PDVWFEPT
Sbjct: 656 LKPTEIQRPKPYYVYDTTNSNAVPDVWFEPT 686
>gi|449305227|gb|EMD01234.1| hypothetical protein BAUCODRAFT_21163 [Baudoinia compniacensis UAMH
10762]
Length = 937
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/587 (43%), Positives = 363/587 (61%), Gaps = 42/587 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F I T R+ I + LR V+ TPEDL+P V L K+A
Sbjct: 270 WKPGEPVPYAALCTTFSKIEMTTKRLEILALCAAFLRQVLRLTPEDLLPTVLLMIGKLAA 329
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ +K+ Q++GDLGLVA SR +Q M KP PLT
Sbjct: 330 DYSGIELGIGESLIMKAIGETTGRSLKIIKEDQQKIGDLGLVAAKSRQNQPTMFKPKPLT 389
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-----------------TDCEPQYLI 347
+ V + IA G+ SQ++K + IK LL +A E +++I
Sbjct: 390 VRGVHEGLMKIATVEGQGSQQRKVDGIKKLLSSADVSLAKGQTVDINKDKGGPSESKFII 449
Query: 348 RLLQSKLRIGLAEQTLLAALGQAAVYNE--QHSKPPPNIQSPLEEAAKIVKQVFSVLPVY 405
R L+ K+R+GLA++ L AL A V +E + K P ++ L++ ++ K V++ LP Y
Sbjct: 450 RALEGKMRLGLADKNLQVALSHAIVAHEVSKDGKKVPT-EADLKKGEEVFKSVYNELPAY 508
Query: 406 EKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGER 465
E IVPALL G+WNL TC PG+P+ PMLAKPTK + E++++F+ +FTCEYKYDGER
Sbjct: 509 EVIVPALLKGGIWNLHETCKLQPGVPLKPMLAKPTKSIGEVLDRFEGKDFTCEYKYDGER 568
Query: 466 AQIHYL-------------------EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
AQIH++ + G I+SRN+E + K+PD++ + K
Sbjct: 569 AQIHFVAHDAGQEFAATEAPKEGKSDRGVSNIFSRNSEDLSKKYPDILAKLPTWVKEGTM 628
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
SFVLDCE VA+D EK+ +LPFQ L TR +K+V DIKV VC++AFD+LY NG+ L+ +
Sbjct: 629 SFVLDCETVAWDVEKKHVLPFQQLMTRKKKDVKTEDIKVKVCVFAFDLLYLNGEALVNKP 688
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATY 625
R RR+ +Y + E G F FA + +++EIQ L+ +V ASCEGL++K +D ++ Y
Sbjct: 689 FRERRDLMYGALEPVEGEFAFAQYGNTREIEEIQTLLEDSVKASCEGLMVKMLDGVESHY 748
Query: 626 EPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSI 685
EPS+RS NWLK+KKDY+ GDSLDLV + A++G+GKRT VYGAF LACY+ E ++++
Sbjct: 749 EPSRRSQNWLKVKKDYLSGAGDSLDLVVLGAYYGKGKRTSVYGAFHLACYNPEKEMYETV 808
Query: 686 CKIGTGFSEAMLEERSSSLRSKVIPKPRPYY--RFADTISPDVWFEP 730
C IGTGFSE +L E +L VI +P+P+Y PDVWFEP
Sbjct: 809 CNIGTGFSEVLLNELYETLSPLVIDRPKPFYDHSMGKNDQPDVWFEP 855
>gi|347600922|gb|AEP15409.1| DNA ligase 1 [Emiliania huxleyi virus 88]
Length = 622
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/557 (47%), Positives = 360/557 (64%), Gaps = 9/557 (1%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
VP+IFL+ F+ I ET R++I + N R V+ P L + L N IA HEG E
Sbjct: 18 VPYIFLASSFNDIEKETKRLVIIEHATNAFRAVIHNDPSSLFHTISLMTNTIAAVHEGFE 77
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
LGIGDA I+K L E ++ V+K + +GDLG VA++ +Q+ KP PLT T V++
Sbjct: 78 LGIGDAIIVKTLTETYMKSTETVRKDLKSLGDLGKVAESYAGAQATFVKPSPLTATHVYN 137
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
TFR IA +GKDS K+ IK LL++A+ E YL+R LQ K+RIG+AEQ++L A+ A
Sbjct: 138 TFRQIATTSGKDSMFTKRVLIKKLLLSASKLETLYLVRALQGKMRIGMAEQSILTAIAYA 197
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
V + + + L A + VKQ F LP Y ++V L+ G N S PG+
Sbjct: 198 YVMSNPGNIFDTKMTGKLSTAVEQVKQAFCELPDYGELVKTLMETGDLNRS---FIKPGV 254
Query: 431 PIGPMLAKPTKGVSEIVNK-FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
P+ PMLAKPT GV+E++++ + FTC++KYDG RAQIH EDG+V ++SRN E T
Sbjct: 255 PVKPMLAKPTNGVTEVMDRMLKSGRFTCDFKYDGMRAQIHMKEDGTVSVFSRNMESMTSS 314
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PDVV ++ + +SF++D E VA D + ILPFQ LSTR RK+ S +IKV VCI
Sbjct: 315 YPDVVNSIPSTLSNNTKSFIIDTEAVAVDGDGN-ILPFQVLSTRKRKDASTDEIKVKVCI 373
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
YAFDILY NG+ L++ L RR+ LY +F + F+FAT++ +EI + L+ AV +
Sbjct: 374 YAFDILYYNGESTLKKTLAQRRDILYTAFSQVGNSFKFATSMNPSTEEEIAEMLNHAVLS 433
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EGL++K++D +++YEPSKRSLNWLKLKKDY+ +GDS DLVPIA + GRGKRTGVYGA
Sbjct: 434 KTEGLMVKSLDDNSSYEPSKRSLNWLKLKKDYLAGMGDSCDLVPIAGYTGRGKRTGVYGA 493
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP-KPRPYYRFAD--TISPDV 726
+LLA YD + E FQS+CKIGTGFS+ L + S SL ++P KP YY AD ++ PDV
Sbjct: 494 YLLAVYDPDEEVFQSVCKIGTGFSDEDLIQLSDSLTPHIVPQKPSDYY-VADVPSLKPDV 552
Query: 727 WFEPTERPETSNSPASI 743
WF PT+ E ++ SI
Sbjct: 553 WFSPTQVWEVLSADLSI 569
>gi|283481371|emb|CAZ69487.1| putative DNA ligase [Emiliania huxleyi virus 99B1]
Length = 622
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/557 (47%), Positives = 361/557 (64%), Gaps = 9/557 (1%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
VP+IFL+ F+ I ET R++I + N R V+ P L + L N IA HEG E
Sbjct: 18 VPYIFLASSFNDIEKETKRLVIIEHATNAFRAVIHNDPSSLFHTISLMTNTIAAVHEGFE 77
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
LGIGDA I+K L E ++ V+K + +GDLG VA++ +Q+ KP PLT T V++
Sbjct: 78 LGIGDAIIVKTLTETYMKSTETVRKDLKSLGDLGKVAESYAGAQATFVKPSPLTATHVYN 137
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
TFR IA +GKDS K+ IK LL++A+ E YL+R LQ K+RIG+AEQ++L A+ A
Sbjct: 138 TFRQIATTSGKDSMFTKRVVIKKLLLSASKLETLYLVRALQGKMRIGMAEQSILTAIAYA 197
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
V + + + L A + VKQ F LP Y ++V L+ G N S PG+
Sbjct: 198 YVMSNPGNIFDTKMTGKLSTAVEQVKQAFCELPDYGELVKTLMETGDLNRS---FIKPGV 254
Query: 431 PIGPMLAKPTKGVSEIVNK-FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
P+ PMLAKPT GV+E++++ + FTC++KYDG RAQIH EDG+V ++SRN E T
Sbjct: 255 PVKPMLAKPTNGVTEVMDRMLKSGRFTCDFKYDGMRAQIHMKEDGTVSVFSRNMESMTSS 314
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PDVV ++ + +SF++D E VA D + ILPFQ LSTR RK+ S +IKV VCI
Sbjct: 315 YPDVVNSIPSTLSNNTKSFIIDTEAVAVDGDGN-ILPFQVLSTRKRKDASTDEIKVKVCI 373
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
YAFDILY NG+ L++ L RR+ LY +F + F+FAT++ +EI + L+ AV +
Sbjct: 374 YAFDILYYNGESTLKKTLAQRRDILYTAFSQVGNSFKFATSMNPSTEEEIAEMLNHAVLS 433
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EGL++K++D +++YEPSKRSLNWLKLKKDY+ +GDS DLVPIA + GRGKRTGVYGA
Sbjct: 434 KTEGLMVKSLDDNSSYEPSKRSLNWLKLKKDYLAGMGDSCDLVPIAGYTGRGKRTGVYGA 493
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP-KPRPYYRFAD--TISPDV 726
+LLA YD + E FQS+CKIGTGFS+ L + S+SL ++P KP YY AD ++ PDV
Sbjct: 494 YLLAVYDPDEEVFQSVCKIGTGFSDEDLIQLSNSLTPHIVPQKPSDYY-VADVPSLKPDV 552
Query: 727 WFEPTERPETSNSPASI 743
WF PT+ E ++ SI
Sbjct: 553 WFSPTQIWEVLSADLSI 569
>gi|409051591|gb|EKM61067.1| hypothetical protein PHACADRAFT_204217 [Phanerochaete carnosa
HHB-10118-sp]
Length = 843
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/574 (44%), Positives = 373/574 (64%), Gaps = 12/574 (2%)
Query: 166 NIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVME 225
NI + K E D + WE G +P+ L+ VF +I T R+ T ++ + L V++
Sbjct: 191 NIEAVLSKTKEVD--IEGGWELGHPIPYAALAKVFGLIEGTTKRLEKTSLLTSFLLLVIQ 248
Query: 226 TTP----EDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMG 281
+ + L+ VYL N++ P + G+ELGIG++ ++KA+AE+ GR+ + +K+ ++ G
Sbjct: 249 RSASGDTDSLLQSVYLCINRLCPDYVGIELGIGESLLLKAIAESTGRSMTVIKQDLKKEG 308
Query: 282 DLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC 341
DLGLVA+ S+++Q + KP PLT+ +F + IA G SQ KK + I LL A
Sbjct: 309 DLGLVARNSKNAQKTLFKPKPLTVPFMFKNLKEIASSTGHSSQNKKVSIITKLLAACQGE 368
Query: 342 EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPP----PNIQSPLEEAAKIVKQ 397
E +Y+IR L+ KLRIG AE+T+L AL AA+ EQ + LE AA++VK
Sbjct: 369 EAKYIIRSLEGKLRIGNAERTVLVALAHAAILAEQEKATKRLNQEKLTGRLEHAAEVVKS 428
Query: 398 VFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC 457
V+S LP Y+ ++PALL G+ L C TPG+P+ PMLAKPTK + E++++F+ +FTC
Sbjct: 429 VYSELPSYDLVIPALLEVGIDGLKERCKLTPGVPLKPMLAKPTKAIGEVLDRFEGKKFTC 488
Query: 458 EYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY 517
EYKYDGERAQ+H L+DG+V ++SRN+E + K+PD++ + R K + +SFVLD E VA
Sbjct: 489 EYKYDGERAQVHKLDDGTVAVFSRNSEDMSKKYPDLMDQLPRCMKSTAKSFVLDAEAVAV 548
Query: 518 DREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDS 577
DR+ ++ PFQ LS R RK+V + DI++ VC++ FD+LY NG+ LL RRE L
Sbjct: 549 DRKTGQLKPFQELSKRKRKDVKVEDIEIWVCLFGFDLLYLNGESLLHHPFAERRELLGTH 608
Query: 578 FEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLK 636
F+E G F FA + +EIQ FL+ +V CEGL++K ++ +A+ YEPS+RS+NWLK
Sbjct: 609 FQEVEGEFTFAKSKDCETTEEIQAFLEESVKDGCEGLMVKMLETEASHYEPSRRSVNWLK 668
Query: 637 LKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
LKKDY+ +GDSLDLV + ++G+GKRT VYGAFLLACYD++ E++Q+ICKIGTGFS+
Sbjct: 669 LKKDYLAGVGDSLDLVVVGGYYGKGKRTNVYGAFLLACYDADGEQYQTICKIGTGFSDEA 728
Query: 697 LEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
L++ L+ + KPR + PDVWFEP
Sbjct: 729 LQQHHELLKPLELTKPRGDIKVGGA-KPDVWFEP 761
>gi|367011607|ref|XP_003680304.1| hypothetical protein TDEL_0C02040 [Torulaspora delbrueckii]
gi|359747963|emb|CCE91093.1| hypothetical protein TDEL_0C02040 [Torulaspora delbrueckii]
Length = 705
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/544 (46%), Positives = 360/544 (66%), Gaps = 3/544 (0%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE-G 248
+VP+ + VF I + R+ I I +M+ P++L+P YL N++ P +E G
Sbjct: 100 KVPYSDVCNVFQEIEGTSSRLSIIKICSEFFSRIMKDNPQNLIPTTYLFINRLGPDYEPG 159
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
LELG+G+ ++K ++EACG++ VK +Y+EMGDLG +A +R+ Q M KP PLT+ +V
Sbjct: 160 LELGLGEGLLMKTISEACGKSLVQVKNRYREMGDLGQIALEARNVQPTMFKPKPLTVGEV 219
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F+ R IA GKDSQ +K IK +L A E ++LIR L+SKLRIGLAE+T+L +L
Sbjct: 220 FENLRAIAHSQGKDSQTRKIKLIKRMLTACEGVEAKFLIRSLESKLRIGLAEKTVLISLS 279
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
+A + NE + P+++ +E+A ++ F +P YE ++ A L G+ L C P
Sbjct: 280 KALLTNEGETGKEPSME-LVEQAEAKIRDAFCQVPNYEIVINACLDYGIMELDKHCRLRP 338
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
GIP+ PMLAKPTK ++E++++FQ FT EYKYDGERAQ+H LEDG++ IYSRN E T
Sbjct: 339 GIPLKPMLAKPTKSITEVLDRFQGQTFTSEYKYDGERAQVHLLEDGTMRIYSRNGENMTE 398
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVC 548
++P++ + ++ +LDCE VA+D+ +QKILPFQ LSTR RK+V D+KV VC
Sbjct: 399 RYPEISIRDFVADLEHTKTLILDCEAVAWDKVQQKILPFQVLSTRKRKDVEAKDVKVRVC 458
Query: 549 IYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVD 608
++AFDI+ NG+ + + LR RRE L + G FQ+A LT+ ++E+QKFLD +V
Sbjct: 459 LFAFDIICHNGERQINKSLRERRELLAQVTKPVAGEFQYAVELTTSSVEELQKFLDQSVK 518
Query: 609 ASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
SCEGL++K +D ++ YEPSKRS NWLKLKKDY++ +GDSLDL + A++GRGKRTG Y
Sbjct: 519 DSCEGLMVKMLDGPESHYEPSKRSRNWLKLKKDYLDGVGDSLDLCVLGAYYGRGKRTGTY 578
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVW 727
G FLL CY+ ++ EF++ CKIGTGFS+ ML++ + P+ Y F + PDVW
Sbjct: 579 GGFLLGCYNQDSGEFETCCKIGTGFSDEMLQQLYERFSKTTLDGPKATYVFDSSAEPDVW 638
Query: 728 FEPT 731
FEPT
Sbjct: 639 FEPT 642
>gi|452988517|gb|EME88272.1| hypothetical protein MYCFIDRAFT_125670 [Pseudocercospora fijiensis
CIRAD86]
Length = 909
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/588 (44%), Positives = 365/588 (62%), Gaps = 44/588 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F I T R+ I + LR V TP+DL+P V L K+A
Sbjct: 242 WKAGDPVPYAALCTTFSKIELTTKRLEILALCSAFLRQVARLTPQDLLPTVLLMNGKLAA 301
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ +K+ Q++GDLGLVA SR +Q M KP PLT
Sbjct: 302 DYSGIELGIGESLIMKAIGESTGRSLKIIKEDQQKIGDLGLVAAKSRQNQPTMFKPKPLT 361
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT-----------------DCEPQYLI 347
+ V + IA G+ SQ +K + IK LL +A E +++I
Sbjct: 362 VRGVHEGLMKIATVEGQGSQGRKVDGIKKLLSSADVNLPKGQNVDINKDKGGPSESKFII 421
Query: 348 RLLQSKLRIGLAEQTLLAALGQAAVYN---EQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
R L+ K+R+GLA+++L AAL A V + E K P ++ L++ +I K V++ LP
Sbjct: 422 RALEGKMRLGLADKSLQAALSHAMVAHAVSEDGKKVP--TEADLKKGEEIFKAVYNELPA 479
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
YE IVPALL G+W L PG+P+ PMLAKPTK + E++++F+ +FTCEYKYDGE
Sbjct: 480 YEVIVPALLEHGIWKLRGALKLRPGVPLKPMLAKPTKSIGEVLDRFEGRDFTCEYKYDGE 539
Query: 465 RAQIHYL-------------------EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSV 505
RAQIHY+ + G I+SRN+E + K+PD++ + K
Sbjct: 540 RAQIHYVAHDADEEFAATVAPKEGKTDRGVSNIFSRNSEDLSKKYPDILARLPSWVKKGT 599
Query: 506 RSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQE 565
+SFVLDCE VA+D EK+ +LPFQ L TR +K+V DIKV VC++AFDILY +G+ L+ +
Sbjct: 600 KSFVLDCETVAWDVEKKHVLPFQQLMTRKKKDVKAEDIKVKVCVFAFDILYLDGEALVNK 659
Query: 566 QLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DAT 624
R RRE +Y +FEE G F FA S +++EIQ LD ++ ASCEGL++K +D ++
Sbjct: 660 PFRERREAMYGAFEEVEGEFAFAKFGNSREIEEIQTLLDESIAASCEGLMVKMLDGVESH 719
Query: 625 YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQS 684
YEPS+RS NWLK+KKDY+ GDSLDLV + A++G+GKRT YGAF LACY+S+ E++++
Sbjct: 720 YEPSRRSQNWLKVKKDYLSGAGDSLDLVVLGAYYGKGKRTNWYGAFHLACYNSSTEQYET 779
Query: 685 ICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
+C IGTGFSEA+L E +L VI + +P+Y PDVWFEP
Sbjct: 780 VCNIGTGFSEAVLAELHETLSPLVIDRAKPFYDHSTGKNDQPDVWFEP 827
>gi|347482118|gb|AEO98059.1| DNA ligase [Emiliania huxleyi virus 203]
gi|347601305|gb|AEP15791.1| DNA ligase [Emiliania huxleyi virus 207]
gi|347601721|gb|AEP16206.1| DNA ligase I [Emiliania huxleyi virus 208]
Length = 622
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/557 (47%), Positives = 360/557 (64%), Gaps = 9/557 (1%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
VP+IFL+ F+ I ET R++I + N R V+ P L + L N IA HEG E
Sbjct: 18 VPYIFLASSFNDIEKETKRLVIIEHATNAFRAVIHNDPSSLFHTISLMTNTIAAVHEGFE 77
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
LGIGDA I+K L E ++ V+K + +GDLG VA++ +Q+ KP PLT T V++
Sbjct: 78 LGIGDAIIVKTLTETYMKSTETVRKDLKSLGDLGKVAESYAGAQATFVKPSPLTATHVYN 137
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
TFR IA +GKDS K+ IK LL++A+ E YL+R LQ K+RIG+AEQ++L A+ A
Sbjct: 138 TFRQIATTSGKDSMFTKRVLIKKLLLSASKLETLYLVRALQGKMRIGMAEQSILTAIAYA 197
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
V + + + L A + VKQ F LP Y ++V L+ G N S PG+
Sbjct: 198 YVMSNPDNIFDTKMTGKLSTAVEQVKQAFCELPDYGELVKTLMETGDLNRS---FIKPGV 254
Query: 431 PIGPMLAKPTKGVSEIVNK-FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
P+ PMLAKPT GV+E++++ + FTC++KYDG RAQIH EDG+V ++SRN E T
Sbjct: 255 PVKPMLAKPTNGVTEVMDRMLKSGRFTCDFKYDGMRAQIHMKEDGTVSVFSRNMESMTSS 314
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PDVV ++ + +SF++D E VA D + ILPFQ LSTR RK+ S +IKV VCI
Sbjct: 315 YPDVVNSIPSTLSNNTKSFIIDTEAVAVDGDGN-ILPFQVLSTRKRKDASTDEIKVKVCI 373
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
YAFDILY NG+ L++ L RR+ LY +F + F+FAT++ +E+ + L+ AV +
Sbjct: 374 YAFDILYYNGESTLKKTLAQRRDILYTAFSQVGNSFKFATSMNPSTEEEVAEMLNHAVLS 433
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EGL++K++D +++YEPSKRSLNWLKLKKDY+ +GDS DLVPIA + GRGKRTGVYGA
Sbjct: 434 KTEGLMVKSLDDNSSYEPSKRSLNWLKLKKDYLAGMGDSCDLVPIAGYIGRGKRTGVYGA 493
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP-KPRPYYRFAD--TISPDV 726
+LLA YD + E FQS+CKIGTGFS+ L + S SL ++P KP YY AD ++ PDV
Sbjct: 494 YLLAVYDPDEEVFQSVCKIGTGFSDEDLIQLSDSLTPHIVPQKPSDYY-VADAPSLKPDV 552
Query: 727 WFEPTERPETSNSPASI 743
WF PT+ E ++ SI
Sbjct: 553 WFSPTQVWEVLSADLSI 569
>gi|71985269|ref|NP_741625.2| Protein LIG-1, isoform a [Caenorhabditis elegans]
gi|66774195|sp|Q27474.2|DNL1_CAEEL RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|54110912|emb|CAA98242.2| Protein LIG-1, isoform a [Caenorhabditis elegans]
Length = 773
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/548 (45%), Positives = 357/548 (65%), Gaps = 5/548 (0%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W KG +VP+ +L + I +G+ + D + V++ +P+DL VY++ N++ P
Sbjct: 13 WAKGSKVPYKEFALTLEKIEELSGKKKV-DELAQFFTKVLDFSPDDLTACVYMSVNQLGP 71
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
++EGLELG+ + S+IKA+A+A GRTE +K+ + GDLG VA+ SRS+Q M+ P LT
Sbjct: 72 SYEGLELGVAENSLIKAVAKATGRTEGKIKEDLRAKGDLGTVAQQSRSNQKMLAVPKALT 131
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ VF+ IAK +G + KK + I ALL+A E ++L+R+L K+RIGL EQ++L
Sbjct: 132 VPTVFNKLTEIAKLSGTSAMNKKVDAISALLIACQGIEARFLVRMLAGKMRIGLGEQSVL 191
Query: 365 AALGQAAVYNE-QHSKPPPNIQSPLEEA-AKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+ALG A ++ K + L++A K VK + P Y +++ LT+GV L
Sbjct: 192 SALGHAFTLSKITDQKVRGDKLDSLKDANVKRVKTAYCECPNYNRLIEVALTEGVEALVE 251
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
C +PGIP+ PMLA PTKG+ EI+ +F++ TCE+KYDGER QIH EDG + IYSRN
Sbjct: 252 KCKLSPGIPLKPMLAHPTKGIDEIMRRFRNQTMTCEWKYDGERGQIHKREDGQIFIYSRN 311
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
E NT K+PD++ +S V SF++D E+VA D E ILPFQ LSTR RKN + D
Sbjct: 312 QENNTTKYPDIIEKISSCIGDGVTSFIVDAEVVAID-EAGLILPFQVLSTRKRKNAT-DD 369
Query: 543 IKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
V V ++ FD+LY NG+PL+++ LR RRE L +F++ G F FAT++ + D DEI F
Sbjct: 370 NGVKVVVFLFDLLYFNGEPLVRKPLRKRRELLRTNFKKIDGSFYFATSVDTNDTDEINSF 429
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
D AV CEGL+IKT+D +ATYE S+RS +WLK+KKDY++ +GD+LDLV + A+ G GK
Sbjct: 430 FDEAVQNKCEGLMIKTLDTEATYEISRRSHSWLKMKKDYVDGVGDTLDLVVMGAYSGVGK 489
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
RTGVYG +LL CY+ EE++S+CKIGTGF++ L E+ L+ K I K YY+F T+
Sbjct: 490 RTGVYGGYLLGCYNPTTEEYESVCKIGTGFTDEDLAEQYKILQDKKIDKSPSYYQFDHTL 549
Query: 723 SPDVWFEP 730
PD F P
Sbjct: 550 KPDDTFSP 557
>gi|345569158|gb|EGX52026.1| hypothetical protein AOL_s00043g416 [Arthrobotrys oligospora ATCC
24927]
Length = 877
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/564 (43%), Positives = 361/564 (64%), Gaps = 18/564 (3%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W++G VP+ L F++I R+ IT L+ V+ +P++ + VV+L N++A
Sbjct: 233 WKEGGSVPYAALCKTFELIDQTRKRLEITAHTSLFLQQVLRLSPKEFLTVVHLMLNRLAA 292
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA++E+ GR+ +K E+GDLGL+A SR++Q + KP PLT
Sbjct: 293 DYMGVELGIGESLIMKAISESTGRSMDKLKSMQSEVGDLGLLAYQSRNAQPTLFKPLPLT 352
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ K+F +A G + K IK LL A E ++L+R L+ KLR+GLAE T+L
Sbjct: 353 VDKIFQGLYKVATTKGDGAMGLKVAEIKKLLAACQGEEAKFLVRGLEGKLRLGLAEATVL 412
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
A QA + +E+ + S L A ++K+VFS LP YE ++PA++ G+ NL + C
Sbjct: 413 QATAQAMITHEKTKEGKIAKASDLVAAEDVLKEVFSGLPSYEVVIPAMVEHGIMNLRDHC 472
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE------- 477
+ PG+P+ PMLAKPTK +SE++++F+D +FTCE+KYDGERAQIHY+ + E
Sbjct: 473 TMQPGVPLKPMLAKPTKSISEVLDRFEDKKFTCEFKYDGERAQIHYVSKTTTEKYASTSA 532
Query: 478 --------IYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQT 529
I+SRN+E + K+PD++ + + SF+LDCE A D++ K+LPFQT
Sbjct: 533 DPKKGLAAIFSRNSEDLSTKYPDILAVLDQWVAEGTTSFILDCETTAVDKDTAKLLPFQT 592
Query: 530 LSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT 589
L TR RK+V++ D+ V VC+YAFD+L+ NG+ L+ + L RR + +F E G F +A
Sbjct: 593 LQTRKRKDVAVEDVTVKVCVYAFDLLFLNGEALVHKSLTERRLAMRKAFNEVKGEFAYAR 652
Query: 590 TLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDS 648
+ +DEIQ L+ +V + CEGL++K +D ++ Y PSKRS NWLK+KKDY+ GDS
Sbjct: 653 FSNTDQVDEIQSLLEESVKSQCEGLMVKMLDGEESYYTPSKRSHNWLKIKKDYLAGTGDS 712
Query: 649 LDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
LDLV + A+HG+GKRT VYGAFLLACY+ ++E++++IC IGTGFS+ +L L +
Sbjct: 713 LDLVVLGAYHGKGKRTSVYGAFLLACYNPSSEQYETICNIGTGFSDEVLANLHKQLEPHI 772
Query: 709 IPKPRPYYRFADTI--SPDVWFEP 730
I KP+PYY + PDVWFEP
Sbjct: 773 IAKPKPYYSHSTVAKDQPDVWFEP 796
>gi|307103045|gb|EFN51310.1| hypothetical protein CHLNCDRAFT_28217 [Chlorella variabilis]
Length = 673
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 269/550 (48%), Positives = 355/550 (64%), Gaps = 13/550 (2%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W +G+ VPF FL+ F++I+ E R++IT + + LR V+ TTP DL+P+VYL N++AP
Sbjct: 5 WGEGKPVPFRFLADTFELIAEEPKRLVITRHLTHALRAVIATTPADLLPIVYLCTNRVAP 64
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
AH G+ELGIGDA++IKALA+A GR ES +K +Y E GDLGLVA SR SQ M KP PLT
Sbjct: 65 AHAGVELGIGDATLIKALAQATGRKESAIKAEYGECGDLGLVAAKSRGSQKPMFKPPPLT 124
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ KVF F+ IA +G SQ++K I LL AA E Y++R LQ KLRIGLAEQT+L
Sbjct: 125 VQKVFAAFKEIASTSGSKSQDRKVRSIVGLLAAADREEAGYVMRQLQGKLRIGLAEQTVL 184
Query: 365 AALGQAAVYNEQ---HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLS 421
AL AA + + LE AA++VKQV+S P Y+ +VPALL + +L
Sbjct: 185 VALAHAAALQREGGGAGGASEELAGRLESAAQVVKQVYSECPSYDDLVPALLAHPIADLP 244
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
+ F PG+P+ PMLAKPT GV E+++KF D EFTCEYKYDGERAQIH LE G V+IYSR
Sbjct: 245 SRVHFKPGVPVKPMLAKPTNGVGEVLDKFTDREFTCEYKYDGERAQIHVLEGGKVKIYSR 304
Query: 482 NAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLS 541
N+E NTGK+PD+ V +P V S VLD E VA+DR+ ++LPFQ V +
Sbjct: 305 NSEDNTGKYPDIAALVPGQLRPGVTSLVLDAEAVAWDRQHNRVLPFQVRWQGVCVCVCVC 364
Query: 542 DIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
D+ + +L R R ++ TS D++E+ +
Sbjct: 365 VCVCVCVCVYTDVTHLFQSSVLLPPTRTRHPPIHPHTHTH------THMQTSRDVEELTR 418
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
FLD +V+A EGLI+KT + DA YEPSKRS +WLKLKKDY+E +GD+ DLVPI A+ G+G
Sbjct: 419 FLDESVEAGTEGLIVKTTE-DA-YEPSKRSSHWLKLKKDYLEGVGDTFDLVPIGAWFGKG 476
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYR--FA 719
KRTG+YG++LLA YD + EE+Q+I KIGTGFSE L++ + + VIP + YYR
Sbjct: 477 KRTGMYGSYLLAAYDPDTEEYQTISKIGTGFSEEQLKQLAEQMEGLVIPDAKKYYRHVLG 536
Query: 720 DTISPDVWFE 729
T+ PDVWF+
Sbjct: 537 VTLIPDVWFD 546
>gi|392571467|gb|EIW64639.1| ATP-dependent DNA ligase [Trametes versicolor FP-101664 SS1]
Length = 692
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 269/605 (44%), Positives = 387/605 (63%), Gaps = 16/605 (2%)
Query: 137 SQPTPPSPKKRKVNVNSV--SAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFI 194
S P P + ++ V+ + E +A + L K K E D + W+ G+ VP+
Sbjct: 10 SSPEDPDEGEDEIEVDEDLDAEDEGVASKNAEAALSKTK--EVD--LPGGWKAGDPVPYA 65
Query: 195 FLSLVFDMISNETGRI----LITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
L+ VF +I T R+ L+T + ++R + + L+ VYL N++ P + G+E
Sbjct: 66 ALAKVFALIEATTKRLEKTALLTSFLLLVIRRRAQGDSQSLLQAVYLCINRLCPDYVGIE 125
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
LGIG++ +IKA++E+ GR+ S VK ++ GDLGLVA S++SQ + KP PLT+ VF
Sbjct: 126 LGIGESLLIKAISESTGRSLSVVKADLKKEGDLGLVAMNSKNSQKTLFKPKPLTLPTVFK 185
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
+ IA +G SQ KK + I L+ + E +Y+IR L+ KLRIG AE+T+L AL A
Sbjct: 186 NLKEIALSSGHSSQNKKVSIITKLMASCQGQEAKYIIRSLEGKLRIGNAERTVLVALAHA 245
Query: 371 AVYNEQH----SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF 426
AV EQ + S LEE+A I+KQV+S LP Y+ ++PALL GV L C
Sbjct: 246 AVLAEQEISNKRSSAEKLASRLEESASIIKQVYSELPNYDLVIPALLDVGVDRLIEVCKL 305
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERN 486
TPG+P+ PMLAKPTK + E+++KF+ +FTCEYKYDGERAQ+H LEDGS+ ++SRN+E
Sbjct: 306 TPGVPLKPMLAKPTKAIGEVLDKFEGKKFTCEYKYDGERAQVHKLEDGSIAVFSRNSEDM 365
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
+ K+PD++ + K ++FV D E VA D++ K++PFQ LS R RK+V + DIKV
Sbjct: 366 SKKYPDLMAQLPSCIKEGTKTFVFDAEAVAIDKDTGKLMPFQELSRRKRKDVKVEDIKVR 425
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFD+LY NG+PLLQ RR L + F G FQFA + DEIQ FL+ +
Sbjct: 426 VCLFAFDLLYLNGEPLLQRDFGTRRGLLQEHFLPVDGEFQFAKSSDCDTTDEIQTFLEES 485
Query: 607 VDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
V CEGL++K ++ + + Y+PS+R++NWLKLKKDY+ +GDSLDLV + A++G+GKRT
Sbjct: 486 VKDGCEGLMVKMLEGELSHYQPSRRTVNWLKLKKDYLAGVGDSLDLVVVGAYYGKGKRTN 545
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
VYGAFLLACYD+++EE+Q+ICKIGTGFS+ L+ +++L+ + PR + PD
Sbjct: 546 VYGAFLLACYDADSEEYQTICKIGTGFSDEALQAHAATLKPLEMTTPRGDVKVGGA-KPD 604
Query: 726 VWFEP 730
VW EP
Sbjct: 605 VWLEP 609
>gi|268558410|ref|XP_002637195.1| C. briggsae CBR-LIG-1 protein [Caenorhabditis briggsae]
Length = 780
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/569 (44%), Positives = 361/569 (63%), Gaps = 11/569 (1%)
Query: 166 NIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVME 225
N + KAG K W KG +VP+ + + I + +G+ I D + V++
Sbjct: 1 NFQMFFSKAG----KAAVEWAKGTKVPYKDFAQTLEKIEDLSGKKKI-DELAQFFTKVLD 55
Query: 226 TTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGL 285
+PEDL VY++ N++ P++EGLELG+ + S+IKA+A+A GRTES +K+ + GDLG
Sbjct: 56 FSPEDLTACVYMSVNQLGPSYEGLELGVAENSLIKAVAKATGRTESKIKEDLRIKGDLGT 115
Query: 286 VAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQY 345
VA+ SRS+Q M+ P LT+ VF+ IAK +G + KK + I ALL+A E ++
Sbjct: 116 VAQQSRSNQKMLAVPKALTVPTVFNKLTEIAKLSGVSAMNKKVDAISALLIACQGIEARF 175
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEE----AAKIVKQVFSV 401
L+R+L K+RIGL EQ++L+ALG A + +Q L+ K VK +
Sbjct: 176 LVRMLAGKMRIGLGEQSVLSALGHAFTFAKQAESEKKMTGEKLDALKDTNVKRVKTAYCE 235
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
P Y +I+ L++G+ L C TPGIP+ PMLA PTKG+ EI+ +F++ TCE+KY
Sbjct: 236 CPNYNRIIEVALSEGIEVLEEKCKLTPGIPLKPMLAHPTKGIDEIMRRFRNQTMTCEWKY 295
Query: 462 DGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK 521
DGER QIH EDG + IYSRN E NT K+PD++ +S V SF++D E+VA D E
Sbjct: 296 DGERGQIHKREDGQIFIYSRNQENNTSKYPDIIEKISTCIGEGVESFIVDAEVVAID-ES 354
Query: 522 QKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEE 581
ILPFQ L+TR RKN + D V V ++ FD+L+ NG+ L+++ LR RRE L +F++
Sbjct: 355 GAILPFQVLTTRKRKNAT-DDNGVKVGVFLFDLLFFNGESLVRQPLRKRRELLRKNFKKI 413
Query: 582 PGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDY 641
G F FAT++ ++D DEI F D A+ CEGL+IKT+D +ATYE S+RS +WLK+KKDY
Sbjct: 414 EGSFYFATSVDTMDTDEINSFFDEAIQNKCEGLMIKTLDTEATYEISRRSKSWLKMKKDY 473
Query: 642 IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERS 701
++ +GD+LDLV + A+ G GKRTGVYG +LL CY+ EE++S+CKIGTGF++ L E+
Sbjct: 474 VDGVGDTLDLVVMGAYVGNGKRTGVYGGYLLGCYNPTTEEYESVCKIGTGFTDEDLSEQF 533
Query: 702 SSLRSKVIPKPRPYYRFADTISPDVWFEP 730
L+ K I + YY+F T+ PD F P
Sbjct: 534 KILQEKKIDRAPVYYQFDPTLKPDDIFAP 562
>gi|15292189|gb|AAK93363.1| LD41868p [Drosophila melanogaster]
Length = 720
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/626 (41%), Positives = 378/626 (60%), Gaps = 45/626 (7%)
Query: 131 IDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKK--------AGEFDPKMV 182
+DSE+++ P + KK V+ + +K+ + N K+ A + P
Sbjct: 58 VDSEEKTSPVK-NVKKEPKEVDDKTTDKKVTTIGLNSTAATKEDVENYDPSADSYHPLKN 116
Query: 183 ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKI 242
A W+ + P++ L+ F +I GR+ + D + N +VM +PEDLVP VYL+ N++
Sbjct: 117 AYWKDKKVTPYLALARTFQVIEETKGRLKMIDTLSNFFCSVMLVSPEDLVPSVYLSINQL 176
Query: 243 APAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP 302
APA+EGLELG+ + +++KA+ +A GR +H+K Q Q GDLG+VA+ SR SQ MM +P P
Sbjct: 177 APAYEGLELGVAETTLMKAICKATGRNLAHIKSQTQLTGDLGIVAEQSRVSQRMMFQPAP 236
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
L + VF R IAK +G + K + + + VA E ++ IR L KLRIG+AEQ+
Sbjct: 237 LNVRDVFRKLREIAKLSG----QSKMDLVYNMFVACRSSEARFFIRSLIGKLRIGIAEQS 292
Query: 363 LLAALGQAAVYNE-----QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGV 417
LL AL V + SK P + + + ++K + P Y+ I+PA+L +
Sbjct: 293 LLTALAIGLVKKNHIDDCKASKVPDVYKDEIVDTTLLLKTAYCQCPNYDIIIPAILKYDI 352
Query: 418 WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE 477
L C M+ TCE+KYDGERAQIH E G +
Sbjct: 353 KELQERCP---------------------------MQITCEWKYDGERAQIHRNEKGEIS 385
Query: 478 IYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
I+SRN+E NT K+PD++ + L K V+S+++D EIVA+D E+++ILPFQ LSTR RKN
Sbjct: 386 IFSRNSENNTAKYPDLIARSTALLKGDVKSYIIDSEIVAWDVERKQILPFQVLSTRKRKN 445
Query: 538 VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD 597
V + +IKV VC+Y FD+LY NG L+ + L RR+ L + F+E G ++FAT L + D+D
Sbjct: 446 VDIEEIKVQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDID 505
Query: 598 EIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAF 657
E+Q+FL+ ++ +CEGL++KT+D +ATYE +KRS NWLKLKKDY+ ++GDSLDLV I +
Sbjct: 506 EVQQFLEESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGY 565
Query: 658 HGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYR 717
G+G+RTG YG FLLACYD+ NEE+QSICKIGTGF++ L+ S L V + YYR
Sbjct: 566 KGKGRRTGTYGGFLLACYDTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYR 625
Query: 718 FADTISPDVWFEPTERPETSNSPASI 743
+ ++ PD WFEP + E + S+
Sbjct: 626 YDPSLEPDHWFEPVQVWEVKCADLSL 651
>gi|396462464|ref|XP_003835843.1| hypothetical protein LEMA_P051840.1 [Leptosphaeria maculans JN3]
gi|312212395|emb|CBX92478.1| hypothetical protein LEMA_P051840.1 [Leptosphaeria maculans JN3]
Length = 896
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 262/583 (44%), Positives = 368/583 (63%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F I T R+ I LR V+ TP D++P V L NK+A
Sbjct: 234 WKPGEPVPYAALCTTFSKIEMTTKRLEILAHCSLFLRQVLRLTPSDMLPTVMLMVNKLAA 293
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA++ + GR+ +K E+GDLGLVA SRS Q M KP LT
Sbjct: 294 DYAGIELGIGESLIMKAVSGSTGRSLQQIKADQNEIGDLGLVAAMSRSKQPTMFKPKALT 353
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA----------------TDCEPQYLIR 348
+ V IA G+ +Q +K + IK LL AA E ++++R
Sbjct: 354 VEGVRKGLMAIATTEGQGAQGRKVDGIKKLLSAADAETAGKAVDIEKDKGGASEAKFIVR 413
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ KLR+GLAE+T++ A+ QA +++E K S L EA I+K V+S LP YE I
Sbjct: 414 TLEGKLRLGLAERTVVVAVAQAMIFHEMSQKGKTPSTSDLAEAEAILKTVYSELPSYEVI 473
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+PA+L G+ NL C PG+P+ PMLAKPTK ++E++++F+ +FTCEYKYDGERAQI
Sbjct: 474 IPAMLEHGIMNLRENCRLQPGVPLKPMLAKPTKSITEVLDRFEGKDFTCEYKYDGERAQI 533
Query: 469 HYL------------------EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
H++ + G I+SRN+E + K+PD++ + K +SFVL
Sbjct: 534 HFVSHDANMKLATAAPSAGKSDRGVSNIFSRNSEDLSKKYPDILAKLPSWVKEGTKSFVL 593
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D E++K+LPFQ L TR RK+V + D+KV VC++AFDILY NG+ L+ + R R
Sbjct: 594 DCETVAWDMEEKKVLPFQQLMTRKRKDVKVEDVKVKVCVFAFDILYLNGEALVTKSFRER 653
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSK 629
REHL ++F E G F FA + +LDEIQ L+ +V + CEGL++K +D ++ YEPSK
Sbjct: 654 REHLREAFTEVEGEFAFAKFGNTNELDEIQILLEDSVKSGCEGLMVKMLDGPESYYEPSK 713
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ +GDSLDLV + A++GRGKRT YGAFLLACY+ + E+++++C IG
Sbjct: 714 RSQNWLKVKKDYLAGVGDSLDLVVLGAYYGRGKRTSWYGAFLLACYNPSTEKYETVCNIG 773
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
TGFSEA+LE +L + VI +P+P+Y + PDVWFEP
Sbjct: 774 TGFSEAILESLHKTLSAIVIDRPKPFYTHSSGNKDQPDVWFEP 816
>gi|270004895|gb|EFA01343.1| hypothetical protein TcasGA2_TC003800 [Tribolium castaneum]
Length = 592
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 242/508 (47%), Positives = 343/508 (67%), Gaps = 13/508 (2%)
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITK 307
GLELG+ + S++KA+A + GR+ S +K QE+GDLGLVA+ S+++Q M+ +P LT+
Sbjct: 18 GLELGVAETSLMKAIASSTGRSMSQIKTDCQELGDLGLVAEQSKTNQRMLFQPARLTVFG 77
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
VF+ + IAK G SQ KK +I+ + VA E ++LIR L KLRIGLAEQ++L AL
Sbjct: 78 VFEKLKEIAKLTGHASQTKKIEKIQTMFVACKKSEARFLIRSLTGKLRIGLAEQSVLQAL 137
Query: 368 GQAAVYNEQHSKPP------------PNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTD 415
A N +SK P + + ++ A I+K + P Y+ I+P LL+D
Sbjct: 138 ALACTLNPPNSKSPVKSVNVAKKIASDDFKENYDKLALILKTTYCECPNYDMIIPRLLSD 197
Query: 416 GVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS 475
G+ L C TPGIP+ PMLA PTKG+ E++++F ++FTCE+KYDGERAQIH +
Sbjct: 198 GIEKLPEYCKLTPGIPLKPMLAHPTKGIQEVLHRFDGLKFTCEWKYDGERAQIH-ISGKD 256
Query: 476 VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
V I+SRN E NT K+PD++ + + K V+S VLDCE VA+DRE++ ILPFQ LSTR R
Sbjct: 257 VFIFSRNQENNTSKYPDIISRIDKCKDEKVQSCVLDCEAVAWDRERKVILPFQILSTRKR 316
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K+ S IKV VC++ FD+LY NG+ L+++ RR L + F+E G + F T+L +
Sbjct: 317 KDADESSIKVQVCVFMFDLLYLNGESLVKKPFIERRNLLKEHFKEVEGEWCFVTSLDTNT 376
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
++E+Q+FL+ ++ +CEGL++KT++++ATYE +KRS NWLKLKKDY++S GD+LDLV I
Sbjct: 377 MEEVQEFLEESIKGNCEGLMVKTLEKEATYEIAKRSHNWLKLKKDYLDSCGDTLDLVVIG 436
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
+ G+GKRTG YG FLLACYD +EEFQSICKIGTGFS+ L++ S L++ VI P+PY
Sbjct: 437 GYLGKGKRTGTYGGFLLACYDQESEEFQSICKIGTGFSDEALQQHSEFLKNHVIQGPKPY 496
Query: 716 YRFADTISPDVWFEPTERPETSNSPASI 743
YRF + PD WF+ + E + S+
Sbjct: 497 YRFDGSHEPDHWFDSVQVWEVKCADLSL 524
>gi|154294102|ref|XP_001547494.1| hypothetical protein BC1G_14121 [Botryotinia fuckeliana B05.10]
Length = 919
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 266/586 (45%), Positives = 381/586 (65%), Gaps = 45/586 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F ++ T R++I LR V+ TP+DL+P V L NK+A
Sbjct: 257 WKPGEPVPYAALCTTFSLVEMTTKRLVIAAHCSLFLRQVLRLTPDDLLPTVLLMINKLAA 316
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR S +K +E+GDLGLVA SRS+Q +M KP PLT
Sbjct: 317 DYAGIELGIGESLIMKAIGESTGRNLSVIKNDQKEIGDLGLVAVKSRSNQPVMFKPKPLT 376
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA---------------TDCEPQYLIRL 349
I V + IA G +Q +K + IK LL AA E +Y++R
Sbjct: 377 IRGVLKSLIDIATMQGNGAQGRKVDGIKKLLSAADAHSSGKVDITKDKGGASEAKYIVRF 436
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAK---IVKQVFSVLPVYE 406
L+ KLR+GLAE+T+L +L QA V +E +K + S E+ AK I+K V S Y+
Sbjct: 437 LEGKLRLGLAEKTVLVSLAQAMVCHEIEAKGSGKVPS-TEQMAKGESILKAVHS----YD 491
Query: 407 KIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
I+PA+L G++NL + C PG+P+ PMLAKPTK ++E++++F++ FTCEYKYDGERA
Sbjct: 492 VIIPAMLEHGIFNLKDNCKLQPGVPLKPMLAKPTKAITEVLDRFENQTFTCEYKYDGERA 551
Query: 467 QIHYL-------------------EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRS 507
QIHY+ + G I+SRN+E + K+PD++ ++ K +S
Sbjct: 552 QIHYVSKDSSKQYLGATPAAAKSSDGGLAAIFSRNSEDLSKKYPDILGKLNTWVKEDTKS 611
Query: 508 FVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQL 567
FVLDCE VA+D ++K+LPFQ L TR +K+V + D+KV VC++AFD+L+ NG+ ++++ L
Sbjct: 612 FVLDCETVAWDTVEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLFLNGEAVVEKSL 671
Query: 568 RVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYE 626
R RR L+++F+ G FQFAT++ ++DEIQ FLD +V ASCEGL++K +D ++ YE
Sbjct: 672 RERRALLHEAFQPVEGEFQFATSMNGQEIDEIQTFLDDSVKASCEGLMVKMLDGTESGYE 731
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
PSKRS NWLK+KKDY+ IGDSLDLV + A++GRGKRT VYGAFLLAC++ + +++IC
Sbjct: 732 PSKRSRNWLKIKKDYLSGIGDSLDLVVLGAYYGRGKRTSVYGAFLLACHNPQTDTYETIC 791
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
IGTGFSE +LEE + L + VI +P+P+Y + PDVWFEP
Sbjct: 792 NIGTGFSEQVLEELYAQLSAIVIDRPKPFYSHSSGNQHQPDVWFEP 837
>gi|71023511|ref|XP_761985.1| hypothetical protein UM05838.1 [Ustilago maydis 521]
gi|46101550|gb|EAK86783.1| hypothetical protein UM05838.1 [Ustilago maydis 521]
Length = 892
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/559 (46%), Positives = 366/559 (65%), Gaps = 15/559 (2%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W++GE VP+ L+ F I T R+ IT+I+ L V++ +P++L+ VVYL N++ P
Sbjct: 255 WKEGEAVPYAALATTFADIQATTKRLEITEILTQFLVRVIKRSPDNLLQVVYLCINRLCP 314
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+EGLELGIG++ +IKA+A++ GR + +KK + GDLGLVA S+ +Q M K L
Sbjct: 315 DYEGLELGIGESLLIKAIAQSTGREVARIKKDLEAQGDLGLVALHSKKNQPTMFKVSSLK 374
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ +VF + IA +G SQ++K IK LL + EP++LIR L+ KLRIGLAE+++L
Sbjct: 375 VPQVFKQLKEIALVSGNKSQDRKIGMIKKLLASCQGDEPKFLIRSLEGKLRIGLAERSVL 434
Query: 365 AALGQAAV---YNEQHSK-PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL 420
+L +A V + SK ++ LE+A ++VK V+S LP Y+ +VPALL GV +L
Sbjct: 435 VSLARAVVIAKLGKTISKLSQESLAKQLEDATELVKAVYSELPSYDLVVPALLKGGVEHL 494
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
+ C TPG+P+ PMLAKPTK +SE++++F+ FTCEYKYDGERAQ+H L + + ++S
Sbjct: 495 RSECKLTPGVPLKPMLAKPTKAISEVLDRFEGKPFTCEYKYDGERAQVHLLPNRQLAVFS 554
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR---------EKQKILPFQTLS 531
RN+E + K+PD+V + R KP+V+SFVLD E A+ + E K+LPFQ LS
Sbjct: 555 RNSENMSVKYPDLVEQIPRCIKPTVKSFVLDAEAAAWKKAQLNAEGILEPAKLLPFQELS 614
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
R RK+V DIKV V ++AFD+L+ NG+ LL L RR L F+ F FA +
Sbjct: 615 RRKRKDVKAQDIKVKVKLFAFDLLFLNGESLLSLPLSERRALLQSHFQPVDDEFDFARSE 674
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLD 650
+++I FLD +V CEGL++K + D+TYEPS+RS+NWLKLKKDY+ GDSLD
Sbjct: 675 DCSSVEQISVFLDKSVKEGCEGLMVKMLSGVDSTYEPSRRSMNWLKLKKDYLAGTGDSLD 734
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP 710
LV I ++G+GKRT VYGAFLLACYDS++E FQ+ICKIGTGF+E LE +L+ I
Sbjct: 735 LVVIGGYYGKGKRTNVYGAFLLACYDSDSETFQTICKIGTGFTEQDLESHYKTLKQLEIS 794
Query: 711 KPRPYYRFADTISPDVWFE 729
+ YY + PDV+FE
Sbjct: 795 GKKGYYDVGEA-KPDVYFE 812
>gi|405122241|gb|AFR97008.1| DNA ligase [Cryptococcus neoformans var. grubii H99]
Length = 801
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/561 (46%), Positives = 359/561 (63%), Gaps = 25/561 (4%)
Query: 179 PKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVME-TTPED-----LV 232
P +V+ +EK I T R+ I +I+ L V + T D L+
Sbjct: 179 PALVSTFEK---------------IEATTKRLEILEILTQFLLVVAKRDTATDAKGSMLL 223
Query: 233 PVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRS 292
VVYL N++ P + G+ELGIG++ ++KA+AE+ GR +K+ + GDLG VA SR+
Sbjct: 224 KVVYLCINRLCPDYIGIELGIGESLLVKAIAESTGRAMPKIKEDLKREGDLGKVAMNSRN 283
Query: 293 SQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQS 352
+QS M KP PLT+ VF IAK +G SQ KK IK LL A E +++IR L+
Sbjct: 284 TQSTMFKPKPLTVPYVFQCLTDIAKASGNASQTKKVGIIKKLLAACQGTEAKFIIRSLEG 343
Query: 353 KLRIGLAEQTLLAALGQAAVYNEQHSKP--PPNIQSPLEEAAKIVKQVFSVLPVYEKIVP 410
KLRIGLA++T++ AL A V K P + + LE+ A+ VK V+S LP Y+ ++P
Sbjct: 344 KLRIGLADKTVVVALAHAIVLKTIGDKKPQPEKLAAMLEQGAETVKAVYSELPSYDLVIP 403
Query: 411 ALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY 470
ALL GV L C TPG+P+ PMLAKPTK ++E++++F+ EFTCEYKYDGERAQ+H
Sbjct: 404 ALLQGGVEGLREHCKLTPGVPLKPMLAKPTKAITEVLDRFEGKEFTCEYKYDGERAQVHL 463
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
LEDG++ ++SRN+E + K+PD+V + R KP+ ++FV+D E VAYD E +KILPFQ L
Sbjct: 464 LEDGTISVFSRNSENMSAKYPDLVDQIPRAMKPTAKTFVIDAEAVAYDLETKKILPFQDL 523
Query: 531 STRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
S R RK+V DI V V I+AFD+LY NG+ LL ++L+ RR+ L + F+ F FA +
Sbjct: 524 SRRKRKDVKAEDITVRVHIFAFDLLYLNGESLLAKELKERRQLLQEHFQPVESEFAFAKS 583
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRD-ATYEPSKRSLNWLKLKKDYIESIGDSL 649
+EIQ L+ +V CEGL++K + + +TYEPS+RS+NWLKLKKDY+ +GDSL
Sbjct: 584 SDGSTTEEIQALLEESVKDGCEGLMVKMLTSESSTYEPSRRSMNWLKLKKDYLSGVGDSL 643
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
DLV I A+HG+GKRT VYGAFLLACYD ++E +Q+ICKIGTGFSE +L + L+ +
Sbjct: 644 DLVVIGAYHGKGKRTAVYGAFLLACYDPDSEHYQTICKIGTGFSEEILAQFYEILKPLEL 703
Query: 710 PKPRPYYRFADTISPDVWFEP 730
R PDVWFEP
Sbjct: 704 EVVRGDIEVGGA-KPDVWFEP 723
>gi|452848459|gb|EME50391.1| hypothetical protein DOTSEDRAFT_145234 [Dothistroma septosporum
NZE10]
Length = 935
Score = 500 bits (1287), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/587 (43%), Positives = 366/587 (62%), Gaps = 42/587 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F I T R+ I LR V+ TP DL+P V L K+A
Sbjct: 268 WKAGEPVPYAALCTTFSKIEMTTKRLEILAHCSLFLRQVLRLTPGDLLPTVLLMIGKLAA 327
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ +K Q++GDLGLVA SR +Q M KP PLT
Sbjct: 328 DYAGIELGIGESLIMKAIGESTGRSLKIIKDDQQKIGDLGLVAAKSRGNQPTMFKPKPLT 387
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-----------------TDCEPQYLI 347
+ V IA G+ +Q +K + IK LL +A E +++I
Sbjct: 388 VRGVHKGLMDIATVEGQGAQGRKVDGIKKLLSSADVNLKKGEQVDINKDKGGPSESKFII 447
Query: 348 RLLQSKLRIGLAEQTLLAALGQAAVYNE--QHSKPPPNIQSPLEEAAKIVKQVFSVLPVY 405
R L+ K+R+GLA++ L A+ A V +E + K P + L++ ++ K V++ LP Y
Sbjct: 448 RALEGKMRLGLADKNLQVAISHAMVAHEVSKEGKKVPT-EDQLKKGEEVFKAVYNELPSY 506
Query: 406 EKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGER 465
E IVPALL +G+W L ++ PG+P+ PMLAKPTK + E++++F+ +FTCEYKYDGER
Sbjct: 507 EVIVPALLENGIWKLRDSLKLRPGVPLKPMLAKPTKSIGEVLDRFEGKDFTCEYKYDGER 566
Query: 466 AQIHYL-------------------EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
AQIH++ + G I+SRN+E + K+PD++ + + K ++
Sbjct: 567 AQIHFVAHDAEQGFAATVAPAAGKSDRGVSNIFSRNSEDLSKKYPDILERLPKWVKQGIQ 626
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
SFVLDCE VA+D EK+ +LPFQ L TR +K+V DIKV VC++AFDILY NG+ L+ +
Sbjct: 627 SFVLDCETVAWDVEKKHVLPFQQLMTRKKKDVKTEDIKVKVCVFAFDILYLNGEALVNKP 686
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATY 625
R RRE +Y +FEE G F FA S +++EIQ LD ++ ASCEGL++K +D ++ Y
Sbjct: 687 FRERREAMYSAFEEVEGEFAFAQYGNSREIEEIQTLLDDSIKASCEGLMVKMLDGVESHY 746
Query: 626 EPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSI 685
EPS+RS NWLK+KKDY+ GDSLDLV + A++G+GKRT YGAF LACY++++E+++++
Sbjct: 747 EPSRRSQNWLKVKKDYLSGAGDSLDLVVLGAYYGKGKRTNWYGAFQLACYNTSSEQYETV 806
Query: 686 CKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
C IGTGFSEA+L E +L VI + +P+Y PDVWFEP
Sbjct: 807 CNIGTGFSEALLAELYETLSPLVIDRAKPFYDHSTGKNDQPDVWFEP 853
>gi|156033275|ref|XP_001585474.1| hypothetical protein SS1G_13713 [Sclerotinia sclerotiorum 1980]
gi|154699116|gb|EDN98854.1| hypothetical protein SS1G_13713 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 914
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/585 (44%), Positives = 378/585 (64%), Gaps = 43/585 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F ++ T R++IT LR V+ TP+DL+ V L NK+A
Sbjct: 252 WKAGEPVPYAALCTTFSLVEMTTKRLIITAHCSLFLRQVLRLTPDDLLSTVLLMINKLAA 311
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR S +K +E+GDLGLVA SRS+Q +M KP PLT
Sbjct: 312 DYAGIELGIGESLIMKAIGESTGRNLSVIKNDQKEIGDLGLVAVKSRSNQPVMFKPKPLT 371
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA---------------TDCEPQYLIRL 349
+ V + IA G +Q +K + IK LL AA E +Y++R
Sbjct: 372 VRAVLKSLIDIATVQGNGAQGRKVDGIKKLLSAADAHSSGKVDITKDKGGASEAKYIVRF 431
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP--LEEAAKIVKQVFSVLPVYEK 407
L+ KLR+GLAE+T+L +L QA V +E +K + S L I+K V S Y+
Sbjct: 432 LEGKLRLGLAEKTVLVSLAQAMVCHEIEAKGSGKVPSTEQLANGESILKAVHS----YDV 487
Query: 408 IVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQ 467
I+PA+L G+++L + C PG+P+ PMLAKPTK ++E++++F++ FTCEYKYDGERAQ
Sbjct: 488 IIPAMLEHGIFSLKDNCKLQPGVPLKPMLAKPTKAITEVLDRFENQTFTCEYKYDGERAQ 547
Query: 468 IHYLE-------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSF 508
IHY+ G I+SRN+E + K+PD++ ++ K +SF
Sbjct: 548 IHYVAKDSPKQYLGATPAAAKPSAGGLAAIFSRNSEDLSKKYPDILGKLNTWVKEDTKSF 607
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
VLDCE VA+D ++K+LPFQ L TR +K+V + D+KV VC++AFD+L+ NG+ ++++ LR
Sbjct: 608 VLDCETVAWDMVEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLFLNGEAVVEKSLR 667
Query: 569 VRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEP 627
RR L+++F+ G FQFAT++ ++DEIQ FLD +V ASCEGL++K +D ++ YEP
Sbjct: 668 ERRALLHEAFQPVEGEFQFATSMNGQEIDEIQTFLDESVKASCEGLMVKMLDGTESGYEP 727
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
SKRS NWLK+KKDY+ IGDSLDLV + A++GRGKRT VYGAFLLAC++ + + +++IC
Sbjct: 728 SKRSRNWLKIKKDYLSGIGDSLDLVVLGAYYGRGKRTSVYGAFLLACHNPHTDTYETICN 787
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
IGTGFSE +LEE + L + VI +P+P+Y + PDVWFEP
Sbjct: 788 IGTGFSEQVLEELHAQLSAIVIDRPKPFYSHSSGNQHQPDVWFEP 832
>gi|395334355|gb|EJF66731.1| ATP-dependent DNA ligase [Dichomitus squalens LYAD-421 SS1]
Length = 834
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 258/555 (46%), Positives = 365/555 (65%), Gaps = 10/555 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRI----LITDIVCNMLRTVMETTPEDLVPVVYLAAN 240
W GE VP+ L+ VF +I T RI L+T + ++R E + L+ VYL N
Sbjct: 199 WNVGEPVPYAALAKVFSLIEATTKRIEKTSLLTSFLLLVIRRRAEGVTQSLLQAVYLCIN 258
Query: 241 KIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
++ P + G+ELGIG++ ++KA++E+ GR+ + VK ++ GDLGLVA S++SQ + KP
Sbjct: 259 RLCPDYMGIELGIGESLLVKAISESTGRSLATVKADLKKEGDLGLVAMNSKNSQKTLFKP 318
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
PLT+ VF + IA +G SQ KK + I LL + E +Y+IR L+ KLRIG AE
Sbjct: 319 KPLTLPTVFKNLKEIAMSSGHSSQNKKVSIITKLLASCQGQEAKYIIRSLEGKLRIGNAE 378
Query: 361 QTLLAALGQAAVYNEQHSKP----PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
+T+L AL AAV EQ S + + LEEAA I+KQV+S LP Y+ ++PALL G
Sbjct: 379 RTVLVALAHAAVLAEQESANKRLNTEKLAARLEEAAGIIKQVYSELPNYDLVIPALLNAG 438
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ L C +PG+P+ PMLAKPTK + E+++KF+ +FTCEYKYDGERAQ+H L DG++
Sbjct: 439 IDGLKEKCKLSPGVPLKPMLAKPTKAIGEVLDKFEGKKFTCEYKYDGERAQVHKLADGTI 498
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
++SRN+E + K+PD++ + R K +FV D E VA D++ K+LPFQ LS R RK
Sbjct: 499 AVFSRNSEDMSKKYPDLMEQLPRCVKEGTETFVFDAEAVAIDKDTAKLLPFQELSRRKRK 558
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+V + DIKV VC++AFD+LY NG+PLLQ+ RR L + F+ FQFA + +
Sbjct: 559 DVKVEDIKVRVCLFAFDLLYLNGEPLLQKDFAERRALLQEHFQPVEHEFQFAKASDAETV 618
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRD-ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
DEIQ FL+ +V CEGL++K ++ + + Y+PS+R++NWLKLKKDY+ +GDSLDLV +
Sbjct: 619 DEIQTFLEESVKDGCEGLMVKMLEGEFSHYQPSRRTVNWLKLKKDYLAGVGDSLDLVVVG 678
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
+ G+GKRT VYGAFLLACYD++ EE+Q+ICKIGTGFS+ L+ +L+ + PR
Sbjct: 679 GYFGKGKRTNVYGAFLLACYDADAEEYQTICKIGTGFSDEALQAHYETLKPLEVHAPRGD 738
Query: 716 YRFADTISPDVWFEP 730
+ PDVWFEP
Sbjct: 739 IKIGGA-KPDVWFEP 752
>gi|255719318|ref|XP_002555939.1| KLTH0H01408p [Lachancea thermotolerans]
gi|238941905|emb|CAR30077.1| KLTH0H01408p [Lachancea thermotolerans CBS 6340]
Length = 723
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/561 (44%), Positives = 368/561 (65%), Gaps = 5/561 (0%)
Query: 174 AGEFDP-KMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV 232
A + DP K+ A K ++ + + VF+ I + R+ I + + L +V+ +D+V
Sbjct: 102 ATKGDPAKLGASAPKDSKILYAEMCNVFNEIEGTSSRLQIVKLCGDFLYSVLLKARKDIV 161
Query: 233 PVVYLAANKIAPAHE-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASR 291
P+ YL NK+ P ++ GLELG+G+ ++K ++E+CG++ +K +Y+E+GDLG +A+ +R
Sbjct: 162 PITYLLINKLGPDYQPGLELGLGEGLLMKTISESCGKSLQQIKARYRELGDLGRIAQEAR 221
Query: 292 SSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQ 351
+ Q M KP PLT +VF + IA+ GKDSQ +K IK +L A E ++LIR L+
Sbjct: 222 AVQPTMFKPKPLTTGEVFSNLQAIARSQGKDSQLRKVQLIKRMLTACQGLEAKFLIRSLE 281
Query: 352 SKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPA 411
SKLRIGLAE+++L AL +A + E + K P + ++ A + ++ F +P Y+ ++
Sbjct: 282 SKLRIGLAEKSVLVALSKALLTYEHNGKEPSS--ELVDTAEQKIRDAFCQVPNYQIVIET 339
Query: 412 LLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL 471
L G+ L C TPGIP+ PMLAKP+K +SE++++FQ FTCEYKYDGERAQ+H L
Sbjct: 340 ALEHGIMELDKHCVLTPGIPLKPMLAKPSKSISEVLDRFQGQRFTCEYKYDGERAQVHLL 399
Query: 472 EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
DGS+ IYSRN E T ++P++ ++ + +LDCE VA+D+EK ILPFQ LS
Sbjct: 400 PDGSMRIYSRNGENMTERYPEIRISDFIADPARTHTLILDCEAVAWDKEKNTILPFQVLS 459
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
TR RK V++ D+KV VC++AFDIL N +PL+ L RR L + PG Q A+ +
Sbjct: 460 TRKRKGVAVEDVKVRVCLFAFDILCYNDEPLITRPLAERRACLERALVPVPGELQLASEV 519
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLD 650
T++ LDE+Q +LD AV CEGL++K ++ ++ YEPSKRS NWLKLKKDY++ +GDSLD
Sbjct: 520 TTMSLDELQHYLDQAVRDCCEGLMVKILEGEESHYEPSKRSRNWLKLKKDYLQGVGDSLD 579
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP 710
L + A++GRGKRTG YG FLL CY+ ++ E+++ CKIGTGFSE ML+ L IP
Sbjct: 580 LCVLGAYYGRGKRTGTYGGFLLGCYNQDSGEYETCCKIGTGFSEEMLQTLFDRLSPTAIP 639
Query: 711 KPRPYYRFADTISPDVWFEPT 731
P+ +Y +++ PDVWFEPT
Sbjct: 640 TPKAFYVHSESAPPDVWFEPT 660
>gi|343427357|emb|CBQ70884.1| probable CDC9-DNA ligase I [Sporisorium reilianum SRZ2]
Length = 852
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 285/701 (40%), Positives = 414/701 (59%), Gaps = 40/701 (5%)
Query: 67 AAAKKKPSPQPNSSSSSSSP--KKRRTLDTQTPKTTNSVVGE---------------KIQ 109
AAA + N+S+++++P KKRR +++ V+ E K+
Sbjct: 72 AAASNGNGTENNASANTAAPQRKKRRIVESDDEDDDEPVLLEAPTPAAAPTTTTTTTKVA 131
Query: 110 EV------AEEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAEL 163
V P+ + V+P D DS E P + + +++ +
Sbjct: 132 SVFAKPPPKTSPAANKVQPKHEATDTDSDSGSEHIPADDDEEDDAEEEEERAIEQEEQKG 191
Query: 164 KSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTV 223
+ L +K E VA W++GE VP+ L+ F I T R+ IT+I+ L V
Sbjct: 192 AKKLAALFQKLSEVKEGKVA-WKQGEPVPYAALASTFADIQATTKRLEITEILTQFLVRV 250
Query: 224 METTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDL 283
++ +P++L+ VVYL N++ P +EGLELGIG++ +IKA+A++ GR + +KK + GDL
Sbjct: 251 IKRSPDNLLHVVYLCINRLCPDYEGLELGIGESLLIKAIAQSTGREVARIKKDLEAQGDL 310
Query: 284 GLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEP 343
GLVA S+ +Q M K L + +VF + IA +G SQ++K IK LL A EP
Sbjct: 311 GLVALNSKKNQPTMFKVSSLKVPQVFKQLKEIAVVSGNKSQDRKIGMIKKLLAACQGDEP 370
Query: 344 QYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK----PPPNIQSPLEEAAKIVKQVF 399
++LIR L+ KLRIGLAE+++L AL +A V + ++ ++ LE+ ++VK V+
Sbjct: 371 KFLIRSLEGKLRIGLAERSVLVALARAVVISRLGAQLAQLSQESLAKQLEDGTELVKAVY 430
Query: 400 SVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
S LP Y+ ++PALL GV L + C TPG+P+ PMLAKPTK +SE++++F+ FTCEY
Sbjct: 431 SELPSYDLVIPALLKGGVEGLRDECKLTPGVPLKPMLAKPTKAISEVLDRFEGKPFTCEY 490
Query: 460 KYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR 519
KYDGERAQ+H L DG++ ++SRN+E + K+PD+V + R SV+SFVLD E A+ +
Sbjct: 491 KYDGERAQMHLLADGTLAVFSRNSENMSVKYPDLVEQIPRCIDASVKSFVLDAEAAAWKK 550
Query: 520 ----------EKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
E K+LPFQ LS R RK+V SDIK+ V ++ FD+LY NG+PLL L
Sbjct: 551 AELNAETGAMEPAKLLPFQELSRRKRKDVKASDIKIKVKLFGFDLLYLNGEPLLSLPLAE 610
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPS 628
RR L F F +A + ++EI FLD +V CEGL++K + D+TYEPS
Sbjct: 611 RRALLQQHFHPVDDEFDYARSEDCTSVEEISVFLDKSVKEGCEGLMVKMLSGPDSTYEPS 670
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
+RS+NWLKLKKDY+ GDSLDLV I ++G+GKRT VYGAFLLACY++++E FQ+ICKI
Sbjct: 671 RRSMNWLKLKKDYLAGTGDSLDLVVIGGYYGKGKRTNVYGAFLLACYNADSETFQTICKI 730
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
GTGF+E LE +L+ I + YY D PDV+FE
Sbjct: 731 GTGFTELDLEAHYKTLKELEISAKKGYYDVGDA-KPDVYFE 770
>gi|308466931|ref|XP_003095716.1| CRE-LIG-1 protein [Caenorhabditis remanei]
gi|308244481|gb|EFO88433.1| CRE-LIG-1 protein [Caenorhabditis remanei]
Length = 779
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/550 (46%), Positives = 358/550 (65%), Gaps = 7/550 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W KG +VPF + + I + +G+ I D + V++ +PEDL VY++ N++ P
Sbjct: 13 WAKGAKVPFKEFAQTLEKIEDLSGKKKI-DELGQFFTKVLDFSPEDLTACVYMSVNQLGP 71
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
++EGLELGI + S+IKA+A+A GR + +K+ + GDLG VA+ SR +Q + +P PLT
Sbjct: 72 SYEGLELGIAEHSLIKAVAQATGREINKIKEDLRIKGDLGTVAQQSRQNQKTLIQPKPLT 131
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I VF+ IAK GK++ K + IK LL + E ++L+R+L K+RIGL EQ++L
Sbjct: 132 IPIVFNKLVKIAKINGKEATTTKISEIKGLLSSCQGIEARFLVRMLAGKMRIGLGEQSVL 191
Query: 365 AALGQA---AVYNEQHSKPPPNIQSPLEEA-AKIVKQVFSVLPVYEKIVPALLTDGVWNL 420
+ALG A A E + K + L++ K VK + P Y++++ LT+G+ L
Sbjct: 192 SALGHALTLAKLAETNKKVSGDKLDALKDTNVKRVKTAYCECPNYDRLIQVALTEGIDAL 251
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
C TPGIP+ PMLA PTKG+ EI+ +F++ TCE+KYDGER QIH +DG + IYS
Sbjct: 252 VEKCKLTPGIPLKPMLAHPTKGIDEIMRRFRNQTMTCEWKYDGERGQIHKRDDGQIFIYS 311
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
RN E NT K+PD++ +S V SF++D E+VA D E ILPFQ LSTR RKN +
Sbjct: 312 RNQENNTTKYPDIIEKISACIGEGVESFIVDAEVVAID-EAGVILPFQVLSTRKRKNAT- 369
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
D V V ++ FD+LY NG+PL++E LR RRE L +F++ G F FAT++ ++D DEI
Sbjct: 370 DDNGVKVGVFLFDLLYFNGKPLVREPLRKRRELLRSNFKKVDGSFYFATSVDTMDTDEIN 429
Query: 601 KFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
F D A+ CEGL+IKT+D +ATYE S+RS +WLK+KKDY++ IGD+LDLV + A+ G
Sbjct: 430 SFFDEAIQNKCEGLMIKTLDTEATYEISRRSKSWLKMKKDYVDGIGDTLDLVVMGAYVGN 489
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD 720
GKRTGVYG +LL CY+ + EE++S+CKIGTGFS+ L E+ L+ K I K YY+F
Sbjct: 490 GKRTGVYGGYLLGCYNPSTEEYESVCKIGTGFSDEDLAEQFKILQEKKIEKAPMYYQFDP 549
Query: 721 TISPDVWFEP 730
T+ PD F P
Sbjct: 550 TLKPDDIFAP 559
>gi|453089474|gb|EMF17514.1| ATP-dependent DNA ligase [Mycosphaerella populorum SO2202]
Length = 927
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/589 (43%), Positives = 358/589 (60%), Gaps = 46/589 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F MI T R+ I LR V+ TP+DL+PVV L K+A
Sbjct: 260 WKVGDPVPYAALCTTFSMIEMTTKRLEILSHCARFLRQVLRLTPDDLLPVVLLMVGKLAA 319
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ VK+ Q++GDLGLVA SR Q MM KP PLT
Sbjct: 320 DYAGIELGIGESLIMKAIGESTGRSLKVVKEDQQKVGDLGLVAAKSRGGQPMMFKPKPLT 379
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-----------------TDCEPQYLI 347
+ V + IA G+ +Q +K + IK LL +A E +++I
Sbjct: 380 VRAVHEGLMKIATVEGQGAQGRKVDGIKKLLSSADINMAKGATIDINKDKGGPSESKFII 439
Query: 348 RLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAK----IVKQVFSVLP 403
R L+ K+R+GLA++ L A+ A V HS + P EE K + K V++ LP
Sbjct: 440 RALEGKMRLGLADKNLQVAVAHAMV---AHSVSKDGKKVPSEEQLKKGEEVFKAVYAELP 496
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
YE I+PALL G+W L + PG+P+ PMLAKPTK + E++++F+ +FTCEYKYDG
Sbjct: 497 AYEVIIPALLEHGIWELRDAVKLKPGVPLKPMLAKPTKSIGEVLDRFEGKDFTCEYKYDG 556
Query: 464 ERAQIHYL-------------------EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPS 504
ERAQIHY+ + G I+SRN+E + K+PD++ + K
Sbjct: 557 ERAQIHYVAHDTDEKFAATIAPAAGKSDRGIANIFSRNSEDLSKKYPDILEKLPNWVKKG 616
Query: 505 VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQ 564
+SFVLDCE VA+D EK+ +LPFQ L TR +K+V DIKV VC++AFDILY +G ++
Sbjct: 617 TKSFVLDCETVAWDVEKKHVLPFQQLMTRKKKDVKTEDIKVKVCVFAFDILYLDGDAMVN 676
Query: 565 EQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DA 623
+ R RRE +Y +FEE G F FA S +++EIQ L+ ++ ASCEGL++K +D ++
Sbjct: 677 KPFRERREAMYGAFEEIEGEFAFAKFGNSKEVEEIQTLLEDSIKASCEGLMVKMLDGVES 736
Query: 624 TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
YEPS+RS NWLK+KKDY+ GDSLDLV I A++G+GKRT YGAF LACY+ E+++
Sbjct: 737 HYEPSRRSQNWLKVKKDYLAGAGDSLDLVVIGAYYGKGKRTNWYGAFQLACYNDQKEQYE 796
Query: 684 SICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
++C IGTGFSE +L E +L I + +P++ PDVWFEP
Sbjct: 797 TVCNIGTGFSEVLLAELYETLSPLAIDRAKPFFDHSTGKNDQPDVWFEP 845
>gi|241952605|ref|XP_002419024.1| DNA ligase I, mitochondrial precursor, putative;
polydeoxyribonucleotide synthase [ATP] [Candida
dubliniensis CD36]
gi|223642364|emb|CAX42606.1| DNA ligase I, mitochondrial precursor, putative [Candida
dubliniensis CD36]
Length = 848
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/554 (46%), Positives = 363/554 (65%), Gaps = 11/554 (1%)
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNM-LRTVMETTPEDLVPVVYLAANKIAPAH 246
G ++P+ L+ VF+ I NE+ R+ I I+ L + ++T + L+ +VYL N++ P +
Sbjct: 232 GVKIPYAKLASVFEAIENESSRLAIIAIISQFFLEVLQQSTIDKLIRIVYLCINRLGPDY 291
Query: 247 E-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTI 305
E GLELG+G+ +IKA++E GR S +K Y+ GDLGL+A+ SRS Q M K PL +
Sbjct: 292 EPGLELGLGETILIKAISECYGRETSKIKADYKSTGDLGLIAQKSRSLQPTMFKTAPLDV 351
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT--DCEPQYLIRLLQSKLRIGLAEQTL 363
VFD IAK GK+SQ KK + IK +L A CE ++LIR LQ KLRIG AE+++
Sbjct: 352 DTVFDNSLKIAKSTGKESQSKKISIIKQMLTACQMKSCEAKFLIRSLQGKLRIGSAEKSI 411
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
+ L QA V E S + S L EA +I+K+ FS +P YE ++ G++NL
Sbjct: 412 IIGLAQAFVNYENKSNKKID-ASKLTEAEEIMKEAFSRVPNYEVVLKTAYQYGIFNLLEH 470
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
C TPGIP+ PMLA PTK + E++++FQ+ EFTCEYKYDG RAQ+H L DGSV+++SRN
Sbjct: 471 CFVTPGIPLKPMLANPTKSIGEVLDRFQNEEFTCEYKYDGVRAQVHILSDGSVKVFSRNL 530
Query: 484 ERNTGKFPDVVLAVSRLK-KPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
E T +PD++ + + S +LDCE VA+DRE KILPFQ L+TR RK+V+ D
Sbjct: 531 EDMTQTYPDLISIGKQFAVDGNTISMILDCEAVAWDREAHKILPFQKLTTRKRKDVNEED 590
Query: 543 IKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT-TLTSIDLDEIQK 601
IKV +C++AFD+LY N + LL + L RR+ + ++ FQFAT T +S +L+ +Q+
Sbjct: 591 IKVQICLFAFDLLYYNNESLLPKSLADRRKIMQENLSPIEDRFQFATATNSSSNLEVLQQ 650
Query: 602 FLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
FLD ++ SCEGL++K ++ D+ YEPSKRS NWLKLKKDY+E +GDSLDLV I A++G+
Sbjct: 651 FLDQSIKDSCEGLMVKMLNGSDSFYEPSKRSRNWLKLKKDYLEGVGDSLDLVVIGAYNGK 710
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD 720
GKRTG YG FLLA Y+ ++ + ++ CKIGTGFS+ L + L I P+ Y+ +
Sbjct: 711 GKRTGTYGGFLLASYNEDSGDLETCCKIGTGFSDEDLLNLYNKLHPTEIASPKNYFVYDT 770
Query: 721 TIS---PDVWFEPT 731
S PDVWFEP+
Sbjct: 771 NNSNAVPDVWFEPS 784
>gi|388854717|emb|CCF51610.1| probable CDC9-DNA ligase I [Ustilago hordei]
Length = 858
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 261/564 (46%), Positives = 362/564 (64%), Gaps = 24/564 (4%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W++GE VP+ L+ F I T R+ IT+I+ L V++ +P++L+ VVYL N++ P
Sbjct: 219 WKEGEPVPYAALAATFADIQATTKRLEITEILTQFLVRVIKRSPDNLLQVVYLCINRLCP 278
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+EGLELGIG++ +IKA+A++ GR + +KK + GDLGLVA S+ +Q M K L
Sbjct: 279 DYEGLELGIGESLLIKAIAQSTGREVARIKKDLEAQGDLGLVALNSKKNQPTMFKVSSLK 338
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ +VF R IA +G SQ++K IK LL + EP++LIR L+ KLRIGLAE+++L
Sbjct: 339 VPQVFKQLREIAVVSGNKSQDRKIGMIKKLLASCQGEEPKFLIRSLEGKLRIGLAERSIL 398
Query: 365 AALGQAAVYNEQHSKPPPNIQS--------PLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
+L +A V S+ NI LEE ++VK V+S LP Y+ ++PALL G
Sbjct: 399 VSLARAVVI----SRLGKNISKLSTEALTRQLEEGTELVKAVYSELPSYDLVIPALLKGG 454
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
V L C TPG+P+ PMLAKPTK ++E++++F+ FTCEYKYDGERAQ+H L G +
Sbjct: 455 VEGLREECKLTPGVPLKPMLAKPTKAITEVLDRFEGKPFTCEYKYDGERAQVHLLPSGKL 514
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR----------EKQKILP 526
++SRN+E + K+PD+V + R KPSV+SFVLD E A+ + E K+LP
Sbjct: 515 AVFSRNSEDMSVKYPDLVEQIPRCIKPSVKSFVLDAEAAAWKKAEPNPETGVMEPAKLLP 574
Query: 527 FQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
FQ LS R RK+V DIK+ V ++ FD+LY NG+ LL L RR+ L D F+ F
Sbjct: 575 FQELSRRKRKDVKAEDIKIKVKLFGFDLLYLNGESLLHLSLGERRKLLQDHFQPVEDEFD 634
Query: 587 FATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESI 645
+A + ++EI FLD +V CEGL++K + D+TYEPS+RS+NWLKLKKDY+
Sbjct: 635 YARSEDCTSVEEISVFLDKSVKEGCEGLMVKMLSGPDSTYEPSRRSMNWLKLKKDYLAGT 694
Query: 646 GDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR 705
GDSLDLV I ++G+GKRT VYGAFLLACYDS++E +QSICKIGTGF+E LE L+
Sbjct: 695 GDSLDLVVIGGYYGKGKRTNVYGAFLLACYDSDSETYQSICKIGTGFTEQDLESHYKVLK 754
Query: 706 SKVIPKPRPYYRFADTISPDVWFE 729
I + YY + PDV+FE
Sbjct: 755 ELEITGKKGYYDVGEA-KPDVYFE 777
>gi|116192011|ref|XP_001221818.1| hypothetical protein CHGG_05723 [Chaetomium globosum CBS 148.51]
gi|88181636|gb|EAQ89104.1| hypothetical protein CHGG_05723 [Chaetomium globosum CBS 148.51]
Length = 862
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 261/582 (44%), Positives = 368/582 (63%), Gaps = 44/582 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+KGE VP+ L F ++ T R+ I LR V+ TP+DL+P V L NK+AP
Sbjct: 207 WKKGEPVPYAALCTTFSLVELTTKRLEIMAHCSLFLRQVLRLTPDDLLPTVLLMINKLAP 266
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E+ GR+ + +K+ +E+GDLGLVA SRS+Q M KP PLT
Sbjct: 267 DYAGIELGIGESLIMKAIGESTGRSLAVIKQDQKEIGDLGLVAVKSRSTQPTMFKPKPLT 326
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC---------------EPQYLIRL 349
+ V IA G +Q KK + IK LL AA E +Y++R
Sbjct: 327 VQGVLKGLMGIATMTGNGAQGKKVDGIKKLLSAADSTGNRKVDITKDKGGPSEAKYIVRF 386
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
L+ KLR+GLAE+T++ +L QA V +E K +E+ I+K V+S LP Y+ I+
Sbjct: 387 LEGKLRLGLAERTVIVSLAQAMVAHEAAQKGVAPSTGDIEKGESILKAVYSELPSYDVII 446
Query: 410 PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH 469
PA++ G+ NL C PG+P+ PMLAKPTK ++E++++F++ FTCEYKYDGERAQIH
Sbjct: 447 PAMVEHGIQNLREHCKLRPGVPLKPMLAKPTKAITEVLDRFENQTFTCEYKYDGERAQIH 506
Query: 470 YLED-------------------GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
Y+ G I+SRN+E + K+PDV+ + K +SFVL
Sbjct: 507 YVAKDTDEELSQSAMNATKEVGKGVAAIFSRNSEDLSKKYPDVLAKLPTWVKEDTKSFVL 566
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D E++K+LPFQ L TR +K+V + D+KV VC++AFD+LY NG+ ++++ LR R
Sbjct: 567 DCESVAWDVEEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLYLNGEAVVKKSLRER 626
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKR 630
RE L+ SF+ G F FAT++ +LD+IQ FLD +V ASCEGL++K +D + T
Sbjct: 627 RELLHKSFQPIEGEFSFATSMDGQELDDIQTFLDESVKASCEGLMVKMLDGEET------ 680
Query: 631 SLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGT 690
N ++KKDY+ IGDSLDLV + A+HG+GKRT VYGAFLLACY+ + + ++++C IGT
Sbjct: 681 --NTDQIKKDYLSGIGDSLDLVVLGAYHGKGKRTSVYGAFLLACYNPSTDTYETVCNIGT 738
Query: 691 GFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
GFSEA+LEE SL VI +P+P+Y PDVWFEP
Sbjct: 739 GFSEAVLEELHGSLSQIVIDRPKPFYAHSSGGQHQPDVWFEP 780
>gi|356927698|gb|AET42488.1| DNA ligase [Emiliania huxleyi virus 202]
Length = 622
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/557 (47%), Positives = 352/557 (63%), Gaps = 9/557 (1%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
VP+IFL+ F I ET R++I + N R VM P L + L N IA HEG E
Sbjct: 18 VPYIFLASSFHDIEKETKRLVIIEHATNAFRAVMHNAPSSLFHTISLMTNTIAAVHEGFE 77
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
LGIGDA I+K L E +T V+K + +GDLG VA + + + KP PL+ + V++
Sbjct: 78 LGIGDAIIVKTLTETYMKTTETVRKDLKSLGDLGKVAASYSGAHATFVKPSPLSASHVYN 137
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
TFR IA +GKDS K+ IK LL++A+ E YL+R LQ K+RIG+AEQ++L A+ A
Sbjct: 138 TFRQIATTSGKDSMFTKRVMIKKLLLSASKLETLYLVRALQGKMRIGMAEQSILTAIAYA 197
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
V + + + S L A + VKQ F LP Y ++V L+ G S PG+
Sbjct: 198 HVMSNPDNIFDTKMASKLSTAVEQVKQAFCELPDYGELVKTLMKTGDLKRS---FIKPGV 254
Query: 431 PIGPMLAKPTKGVSEIVNK-FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
P+ PMLAKPT GV+E++++ + FTC++KYDG RAQIH EDG++ ++SRN E T
Sbjct: 255 PVKPMLAKPTNGVTEVMDRMLKSGRFTCDFKYDGMRAQIHMKEDGTISVFSRNMESMTTS 314
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PDVV + P+ +SF++D E VA D + ILPFQ LSTR RK+ +IKV VCI
Sbjct: 315 YPDVVNIIPSTLSPNTKSFIIDTEAVAVDVDGN-ILPFQILSTRKRKDAESDEIKVKVCI 373
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
YAFDILY NG+ L+ L RR+ LY++F F+FAT++ +E+ L+ AV A
Sbjct: 374 YAFDILYYNGESTLKNTLSQRRDILYNAFVPTGHQFKFATSMDPSTEEEVADMLNQAVQA 433
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EGL++K++D +++YEPSKRSLNWLKLKKDY+ +GDS DLVPIA +HGRGKRTGVYGA
Sbjct: 434 KTEGLMVKSLDDNSSYEPSKRSLNWLKLKKDYLAGMGDSCDLVPIAGYHGRGKRTGVYGA 493
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR-SKVIPKPRPYYRFADT--ISPDV 726
+LLA YD E FQS+CKIGTGFS+ L + S SL +V KP Y A+T + PDV
Sbjct: 494 YLLAVYDPYEEVFQSVCKIGTGFSDEDLIQLSDSLNPHRVDQKPNDYC-VAETPSLKPDV 552
Query: 727 WFEPTERPETSNSPASI 743
WF PT+ E ++ SI
Sbjct: 553 WFIPTQVWEVLSADLSI 569
>gi|255726816|ref|XP_002548334.1| DNA ligase I, mitochondrial precursor [Candida tropicalis MYA-3404]
gi|240134258|gb|EER33813.1| DNA ligase I, mitochondrial precursor [Candida tropicalis MYA-3404]
Length = 766
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 296/711 (41%), Positives = 416/711 (58%), Gaps = 45/711 (6%)
Query: 41 KPLSSSLNPRRKMSSSA---PNAFQVLMSAAAKKKPSPQP---NSSSSSSSPKKRRTLDT 94
KP SL RK S A P Q +S+ KK SSS++SSP K +T
Sbjct: 18 KPNQQSLMSNRKQQSLARFFPGMSQSAVSSQNHKKQQSINRYFGSSSNNSSPTKSQTQKR 77
Query: 95 QTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSV 154
+ +S +K + + PS DL + D+ + + + S + + +
Sbjct: 78 EATPPESSSPSKKPKIGSSSPSADLENDTVAPVSPTTDTTTKLKHSEDSSRLENEKLIEL 137
Query: 155 SAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITD 214
S K+K+ N+ G ++P+ L+ VF+++ E+ R+ IT
Sbjct: 138 SEKQKLEHRNENL--------------------GPKIPYAKLTSVFEVVDKESSRLKITA 177
Query: 215 IVCNM-LRTVMETTPEDLVPVVYLAANKIAPAH-EGLELGIGDASIIKALAEACGRTESH 272
IV L + ++T + LV +VYL+ NK+ P + +GLELG+G+ +IKA++E GR+ +
Sbjct: 178 IVSQFFLEILQQSTVDKLVKIVYLSINKLGPDYAQGLELGLGETILIKAISECYGRSPAK 237
Query: 273 VKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
+K + + GDLG +A+ SRS Q M KP PL I VF+ + IAK GKDSQ KK IK
Sbjct: 238 IKAEMVKSGDLGDIAQKSRSMQPPMFKPAPLDIDTVFENLQQIAKSNGKDSQSKKIGLIK 297
Query: 333 ALLVAATDCEPQ-----YLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP 387
+L A C+P+ +LIR L KLRIG+AE+TL+ L QA V E + N
Sbjct: 298 KMLSA---CDPKANEAKFLIRSLAGKLRIGIAEKTLVVGLAQAFVNFENKTNKRIN-PDK 353
Query: 388 LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIV 447
L EA +IVK+ S +P YE ++ G++NL + TPGIP+ MLAKPTK + EI
Sbjct: 354 LAEAEEIVKEAISRVPNYEVVLKKAYEHGIFNLLDHVHVTPGIPLKAMLAKPTKSIGEIF 413
Query: 448 NKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRL--KKPSV 505
++FQD EFTCEYKYDG RAQ+H L DG+V++YSRN E T +PD+V V+ K SV
Sbjct: 414 DRFQDAEFTCEYKYDGFRAQVHVLSDGTVKVYSRNLEDMTETYPDLVSIVNEFTTDKSSV 473
Query: 506 RSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQE 565
SF+LDCE VA+DR + KILPFQ L+TR RK+V+ DI V++C+YAFD+LY + LL
Sbjct: 474 -SFILDCEAVAWDRIQHKILPFQRLTTRKRKDVNEEDITVNICLYAFDLLYFQDESLLTR 532
Query: 566 QLRVRREHLYDSFEEEPGFFQFATTL-TSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DA 623
L RR+ L++ F+ FQFAT +S +L+ +Q FLD ++ SCEGL++K ++ D+
Sbjct: 533 SLADRRKLLHEKFKPIDEKFQFATAKDSSSNLEVLQTFLDQSIKDSCEGLMVKMLNGPDS 592
Query: 624 TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
YEPSKRS NWLKLKKDY+ +GDSLDLV I A+ G+GKRTG YG FLLA Y+ + + +
Sbjct: 593 FYEPSKRSRNWLKLKKDYLAGVGDSLDLVVIGAYSGKGKRTGTYGGFLLASYNQDTGDLE 652
Query: 684 SICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTIS---PDVWFEPT 731
+ CKIGTGFS+ L L I P+ Y+ + S PDVWFEP+
Sbjct: 653 TCCKIGTGFSDEDLASLYKKLHPTEIKTPKKYFVYETNNSNAVPDVWFEPS 703
>gi|393218639|gb|EJD04127.1| DNA ligase I [Fomitiporia mediterranea MF3/22]
Length = 849
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/555 (46%), Positives = 370/555 (66%), Gaps = 10/555 (1%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVME-TTPED---LVPVVYLAAN 240
W+ G+ VP+ L+ F +I T RI T ++ +L VM + P D L+ VYL N
Sbjct: 213 WKSGDPVPYAALAKAFSLIEATTKRIEKTTLLTALLLLVMRRSAPGDYKSLLQTVYLCIN 272
Query: 241 KIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
+++P + G+ELGIG++ +IKA+ E+ GR S +K + GDLGLVA S++SQ + KP
Sbjct: 273 RLSPDYVGIELGIGESILIKAIGESTGRGLSVIKADLKREGDLGLVAMTSKNSQKTIFKP 332
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
LT+ VF R IA +G SQ KK + I LL A + E +Y++R L+ KLRIG AE
Sbjct: 333 KRLTVPYVFSNLREIALSSGHSSQAKKVSIITKLLAACQEHEAKYIVRSLEGKLRIGNAE 392
Query: 361 QTLLAALGQAAVYNEQHSKPPPNIQ----SPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
++++ AL A V +E+ Q S LE+ A I+K V+S LP Y++++PA++ G
Sbjct: 393 RSVVVALAHAVVLHEKEKAGKKWSQEKLVSRLEQGANILKSVYSELPSYDEVIPAIVESG 452
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ +L C PG+P+ PMLAKPTK + E++++ + +FTCEYKYDGERAQ+H LEDG+V
Sbjct: 453 IEHLREKCKLKPGVPLKPMLAKPTKAIGEVLDRCEGKKFTCEYKYDGERAQVHKLEDGTV 512
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
++SRN+E + K+PD+V + K + ++FVLDCE VA+D ++ K++PFQ LS R RK
Sbjct: 513 AVFSRNSEDMSKKYPDLVEQLPHCVKDTAKTFVLDCEAVAFDIKEDKLMPFQELSKRKRK 572
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+V + DI+V VC++AFD+LY NG+PLLQ+ L RR+ L + F+ G F FA +
Sbjct: 573 DVKVEDIQVRVCLFAFDLLYLNGEPLLQKPLSERRQILREHFQPVHGEFDFAKSSDGETT 632
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+ IQ FL+ +V CEGL+IK ++ +A+ YEPSKRS+NWLKLKKDY+ +GDSLDLV +
Sbjct: 633 EAIQAFLEESVKDGCEGLMIKMLETEASYYEPSKRSVNWLKLKKDYLAGVGDSLDLVVVG 692
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
A++G+GKRT VYGAFLLACYD ++EE+Q+ICKIGTGFSE L+ ++L+ KPR
Sbjct: 693 AYYGKGKRTNVYGAFLLACYDPDSEEYQTICKIGTGFSEEALQAHYTTLKPLENEKPRGD 752
Query: 716 YRFADTISPDVWFEP 730
+ PDVWF+P
Sbjct: 753 IKVGGA-KPDVWFDP 766
>gi|448516161|ref|XP_003867506.1| Cdc9 protein [Candida orthopsilosis Co 90-125]
gi|380351845|emb|CCG22069.1| Cdc9 protein [Candida orthopsilosis]
Length = 760
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 282/679 (41%), Positives = 407/679 (59%), Gaps = 37/679 (5%)
Query: 65 MSAAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPIS 124
+ A KK SP S+++PK ++ D T + + S L K
Sbjct: 42 LDAKRKKTSSPPSTQKESTTTPKNLKSSDPIT---------------SPDSSPKLKKQKL 86
Query: 125 NQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVAC 184
N +N D++ +S+ S +N+ A E A+ + ++K + D ++
Sbjct: 87 NGEENKDDADSKSESNSDS------ELNNKHASETEAKKLIELSEFQQKQNKQDRHTLSS 140
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE--DLVPVVYLAANKI 242
++P+ L+ + + I +E+ R+ IT I+ ++++ E LV +VYL N++
Sbjct: 141 ----SKIPYSSLTDIMEKIESESSRLKITAIISQYFLEILQSQNEVSKLVKIVYLFINRL 196
Query: 243 APAHE-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD 301
P +E LELG+G+ ++KA++E GRT + +++ +E GDLG+VA+ SRS Q M KP
Sbjct: 197 GPDYEPDLELGLGETLLVKAISEGYGRTPAKIRQDLKEYGDLGIVAQKSRSGQRTMFKPT 256
Query: 302 PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVA--ATDCEPQYLIRLLQSKLRIGLA 359
L + VFD IAK GKDSQ KK I +L A E ++LIR L++KLRIGLA
Sbjct: 257 SLDVDTVFDNLTKIAKSTGKDSQSKKIGIINKMLTACDVKHSEAKFLIRSLENKLRIGLA 316
Query: 360 EQTLLAALGQAAVYNEQHSKPPPNIQSP--LEEAAKIVKQVFSVLPVYEKIVPALLTDGV 417
T+L L QA V E + P SP L EA IVK+ ++ +P Y+ ++ GV
Sbjct: 317 GPTILVGLAQAFVNYENSKQEKPKRVSPEKLAEAEDIVKEAYTRIPNYQILIENAYKYGV 376
Query: 418 WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE 477
+NL + C TPGIP+ PMLAKPTK +SE++++FQD +FTCEYKYDGERAQIH L +G V
Sbjct: 377 FNLLDHCKLTPGIPLKPMLAKPTKSMSEVLDRFQDEKFTCEYKYDGERAQIHLLPNGDVR 436
Query: 478 IYSRNAERNTGKFPDVVLAVSRLKKPSVR-SFVLDCEIVAYDREKQKILPFQTLSTRARK 536
IYSRN+E + ++PD++ + K S +LDCE VA+DR +KILPFQ LSTR RK
Sbjct: 437 IYSRNSEDMSQRYPDLISIIREFSKAQEHTSLILDCEAVAWDRINKKILPFQVLSTRKRK 496
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+V+ DI V +C++AFD+LY N + LL + L RR ++ G FQFAT+ S L
Sbjct: 497 DVNELDITVHICLFAFDLLYYNNESLLTKSLSERRSIMFTHLHPLEGKFQFATSKDSTSL 556
Query: 597 DEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+ +Q+FLD +V SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+ +GDSLDLV I
Sbjct: 557 EVLQQFLDQSVHDSCEGLMVKMLEGSESYYEPSKRSRNWLKLKKDYLAGVGDSLDLVVIG 616
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
A++G+GKRTG YG FLLA Y+ + + ++ CKIGTGFS+ ML + L IP+P+ Y
Sbjct: 617 AYNGKGKRTGTYGGFLLATYNQDTGDLETTCKIGTGFSDEMLTQLYQKLHPSEIPRPKEY 676
Query: 716 YRFADTIS---PDVWFEPT 731
+ + T S PDVWFEPT
Sbjct: 677 FVYDKTNSNAVPDVWFEPT 695
>gi|219121358|ref|XP_002185904.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582753|gb|ACI65374.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 651
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/576 (44%), Positives = 351/576 (60%), Gaps = 35/576 (6%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ L F I T R+LI I +LR + P DL PV+YLA+N +APA+E +E
Sbjct: 1 MPYSVLCQAFTDIEAVTSRLLIQQIFTTLLRQIAVQNPVDLYPVLYLASNDVAPAYECVE 60
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRK--------PDP 302
LG+GD+ +++A+ EA G + VKK+Y+E+GDLG VAK+ +S Q + P
Sbjct: 61 LGVGDSILVRAIGEATGTNPAMVKKRYEEIGDLGDVAKSFKSKQRTLGGFFQKSVAPKKP 120
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-EPQYLIRLLQSKLRIGLAEQ 361
LT +V FR IA+ G SQ+ K IK L+V AT+ E +Y++R LQ KLRIGLA+
Sbjct: 121 LTAAQVLHVFREIAQTKGNQSQKWKVENIKKLIVQATEATETKYIVRGLQGKLRIGLAQS 180
Query: 362 TLLAALGQAAVYN-------------EQHSKPPPNIQ---------SPLEEAAKIVKQVF 399
T+L L A E P Q +E A IVK+ +
Sbjct: 181 TVLIGLAHALALTPPITLCPHQPTLAELEDYPAEARQYLDDTLPSEKRMEAAVAIVKKAY 240
Query: 400 SVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
S +P Y+ IV + L C+ TPGIP+ PMLAKPTK + E++ + + FTCEY
Sbjct: 241 SEVPSYDAIVNGAAKVPLHQLHRACTLTPGIPVAPMLAKPTKSIQEVLKRLSGLRFTCEY 300
Query: 460 KYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR 519
KYDGERAQ+H L DG+ ++SRN + K+P+V L V + +V SFVLD E+VAY+
Sbjct: 301 KYDGERAQVHLLPDGTTRVFSRNLLDTSEKYPEVPLFVKEACR-NVESFVLDAEVVAYNN 359
Query: 520 EKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFE 579
+ +++PFQ LSTR + S KV V + AFD++Y NG+ LL + L RR L + FE
Sbjct: 360 KTGQLVPFQILSTRKKTEESAETAKVQVIVQAFDLMYLNGKSLLNQTLAARRSLLMEHFE 419
Query: 580 EEPGFFQFATTLTSI---DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLK 636
PG FQFA +L D +++FLD+AV CEGL++KT++ +A YEPS+RSLNWLK
Sbjct: 420 AVPGKFQFAKSLDHKEDGDTTVLEEFLDSAVKGQCEGLMVKTLEVNAIYEPSRRSLNWLK 479
Query: 637 LKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
LKKDY++ +GDS+DLVP+ A+HGRGKRTG YGA+LLACYDS EEFQS+CKIGTGFSE
Sbjct: 480 LKKDYLDGLGDSVDLVPLGAYHGRGKRTGFYGAYLLACYDSETEEFQSVCKIGTGFSEED 539
Query: 697 LEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
L+ + +L VIP Y +D + DVWF+ +
Sbjct: 540 LKSLAENLNQHVIPTKSQQYSVSDVLECDVWFDAVQ 575
>gi|398410722|ref|XP_003856709.1| hypothetical protein MYCGRDRAFT_31749 [Zymoseptoria tritici IPO323]
gi|339476594|gb|EGP91685.1| hypothetical protein MYCGRDRAFT_31749 [Zymoseptoria tritici IPO323]
Length = 884
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 287/732 (39%), Positives = 402/732 (54%), Gaps = 54/732 (7%)
Query: 44 SSSLNPRRKMSSSAPNAFQVLMSAAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSV 103
SSSL RR S N KK QP + +S K+ T + P S
Sbjct: 80 SSSLKKRRASEDSKENVLDEDDDEPPSKKQRQQPTNGASKKGMAKKVTTKSTEPAKAES- 138
Query: 104 VGEKIQEVAEEPSNDLVKPISNQIDNPI----DSEKESQPTPPSPKKRKVNVNSVSAKEK 159
+ EEP K SN + D+++ T + + K +
Sbjct: 139 -----ENEDEEPVKKEQKSTSNGKSKAMIKQEDADENDSETESAEEASASEEEEEDVKPE 193
Query: 160 IAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNM 219
+A V KA DP W+ G+ VP+ L F I T R+ I
Sbjct: 194 VAAKVRAKVQSTLKASGKDP--YPDWKAGDPVPYAALCTTFSKIEMTTKRLEILAHCSLF 251
Query: 220 LRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQE 279
LR V+ TP DL+P V L K+A + G+ELGIG++ I+KA+ E GR+ + +K+ ++
Sbjct: 252 LRQVLRLTPNDLLPTVLLMIGKLAADYAGVELGIGESLIMKAIGETTGRSLAIIKEDQRK 311
Query: 280 MGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT 339
+GDLGLVA SR +Q M KP PLTI V + IA G SQ +K + IK LL +A
Sbjct: 312 IGDLGLVAAKSRGNQPTMFKPKPLTIRGVHEGLLKIAVVEGSGSQGRKVDAIKKLLASAD 371
Query: 340 -----------------DCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE--QHSKP 380
E +++IR L+ K+R+GLA++ L AL A V + Q K
Sbjct: 372 VNIPKGQSIDITENKGGPSESKFIIRALEGKMRLGLADKNLQVALAHAMVAHSVAQDGKK 431
Query: 381 PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPT 440
P+ + L++ + K V+S LP YE IVPALL +G+W L + PG+P+ PMLAKPT
Sbjct: 432 VPS-EEELKKGEETFKSVYSELPSYELIVPALLENGIWKLRGSLRLRPGVPLKPMLAKPT 490
Query: 441 KGVSEIVNKFQDMEFTCEYKYDGERAQIHYL-------------------EDGSVEIYSR 481
K + E++++F+ +FTCEYKYDGERAQIH++ + G I+SR
Sbjct: 491 KSLGEVLDRFEGKDFTCEYKYDGERAQIHFVSHDSDLDFATTVAPTAGKSDRGVSNIFSR 550
Query: 482 NAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLS 541
N+E + K+PD++ + K SFVLDCE VA+D EK+ +LPFQ L TR +K+V
Sbjct: 551 NSEDLSKKYPDILSKLPTWVKHGTTSFVLDCETVAWDVEKKHVLPFQQLMTRKKKDVKAE 610
Query: 542 DIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
D+KV VC++AFDILY NG L+ + R RRE +Y +F E G F FA S +++EIQ
Sbjct: 611 DVKVKVCVFAFDILYLNGSALVNKSFRERRELMYSAFSEVEGEFSFAKFGNSREIEEIQV 670
Query: 602 FLDAAVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
LD ++ ASCEGL++K +D ++ YEPS+RS NWLK+KKDY+ GDSLDLV + A+ G+
Sbjct: 671 LLDESIKASCEGLMVKMLDGPESYYEPSRRSQNWLKVKKDYLAGAGDSLDLVVLGAYFGK 730
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF-- 718
GKRT YGAF LACY+++ E+++++C IGTGFSEA+L E L I +P+P+Y
Sbjct: 731 GKRTNWYGAFTLACYNTSKEQYETVCNIGTGFSEAILAELYDLLSPLAIDRPKPFYAHSA 790
Query: 719 ADTISPDVWFEP 730
PDVWFEP
Sbjct: 791 GKNDQPDVWFEP 802
>gi|254572497|ref|XP_002493358.1| DNA ligase found in the nucleus and mitochondria [Komagataella
pastoris GS115]
gi|238033156|emb|CAY71179.1| DNA ligase found in the nucleus and mitochondria [Komagataella
pastoris GS115]
Length = 744
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/546 (46%), Positives = 364/546 (66%), Gaps = 15/546 (2%)
Query: 196 LSLVFDMISNETGRI----LITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE-GLE 250
L+ +F+ + E R+ + ++ +LR+ + T LV V+YL N++ P +E LE
Sbjct: 142 LTNIFEKLEQEPARLKNLAIASEFFLQILRSNHKRT---LVEVIYLMINRLGPDYELDLE 198
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
LG+G+ ++KA+AE GRT ++ + ++GD+GLVA+ SRS Q M K PLTI VF+
Sbjct: 199 LGLGETLLVKAIAEGTGRTPQRIRSELHKLGDIGLVAQNSRSRQPTMFKSKPLTIHSVFE 258
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
IAK +G SQ +K I +L E ++L+R L+ KLRI E+++L AL +A
Sbjct: 259 NLTKIAKSSGNASQARKIGLINQMLTTCEGSEAKFLMRSLEGKLRINFGEKSVLVALSKA 318
Query: 371 AVYNEQHSKPPPNIQSPLE--EAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
E SP E +A + +K+ FS +P YE IV L G+ NL+ C+ P
Sbjct: 319 FSEYEHELSSKKGHVSPQELVDAEEAIKKAFSQIPNYEIIVDEALKYGISNLATHCTLKP 378
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
GIP+ PMLAKPTK ++E+++ F EFTCEYKYDGERAQ+H EDG+V+IYSRN+E +
Sbjct: 379 GIPLKPMLAKPTKSITEVLDHFHGQEFTCEYKYDGERAQLHVQEDGTVKIYSRNSEDMSQ 438
Query: 489 KFPDVVLAVSRLKKP--SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
++PD++ VS++K V + +LDCE VA+D EK KILPFQ LSTR RK+V+ DIKV
Sbjct: 439 RYPDLIDVVSQIKTQCNGVITLILDCECVAWDGEKGKILPFQVLSTRKRKDVNAKDIKVQ 498
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFDIL+ NG+ LL+ L+ RR+ L+++ + G FQFA + + ++ EIQ FLD +
Sbjct: 499 VCLFAFDILFLNGKSLLELPLKERRKILHENVKPIEGKFQFAEAMDADNVAEIQHFLDQS 558
Query: 607 VDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
V SCEGL++K +D D + YEPSKRS+NWLKLKKDY+E +GDSLDL + + G+GKRTG
Sbjct: 559 VKDSCEGLMVKMLDGDKSHYEPSKRSVNWLKLKKDYLEGVGDSLDLAVVGGYIGKGKRTG 618
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
YG FLLACY+ ++ E+++ CKIGTGFSE ML+ S +L+ VI +P+P+Y + SPD
Sbjct: 619 WYGGFLLACYNEDSGEYETCCKIGTGFSEEMLQTLSGTLKPTVIQQPKPFYVY--DASPD 676
Query: 726 VWFEPT 731
VWFEPT
Sbjct: 677 VWFEPT 682
>gi|354543474|emb|CCE40193.1| hypothetical protein CPAR2_102310 [Candida parapsilosis]
Length = 736
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 291/680 (42%), Positives = 402/680 (59%), Gaps = 37/680 (5%)
Query: 64 LMSAAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPI 123
L +A +K SP P ++ SPK + D TP +S K Q++ + S D
Sbjct: 17 LNAAGKEKTTSPPPTQKENTVSPKSFKRSDPITP--PDSSPKSKKQKLNDNESKD----- 69
Query: 124 SNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVA 183
D+E S S +N+ A E E K I L + + + K A
Sbjct: 70 --------DNESRSGSASDS------ELNNKHASE--TEAKKLIELSESQQNQ--SKQDA 111
Query: 184 CWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE--DLVPVVYLAANK 241
++P+ L+ + + I +E+ R+ IT I+ +++ + LV +VYL N+
Sbjct: 112 PNLSSSKIPYSSLTDIMEKIESESSRLKITAIISQYFLDILQQQGDVSKLVKIVYLFINR 171
Query: 242 IAPAHE-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
+ P +E LELG+G+ ++KA++E GRT + +K+ +E GDLG+VA+ SRS Q M KP
Sbjct: 172 LGPDYEPDLELGLGETLLVKAISEGYGRTPAKIKQDLKEYGDLGVVAQKSRSGQRTMFKP 231
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVA--ATDCEPQYLIRLLQSKLRIGL 358
L I VFD IAK GKDSQ KK I +L A A E ++LIR L++KLRIGL
Sbjct: 232 TSLDIDTVFDNLTKIAKSTGKDSQSKKIGIINKMLTACDAKHNEAKFLIRSLENKLRIGL 291
Query: 359 AEQTLLAALGQAAVYNEQHSKPPPNIQSP--LEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
A T+L L QA V E P SP L EA IVK+ ++ +P Y+ ++ G
Sbjct: 292 AGPTILVGLAQAFVNYENSKLEKPKKVSPEKLAEAEDIVKEAYTRIPNYQILIENAYKYG 351
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
V+NL C TPGIP+ PMLAKPTK +SE++++FQD +FTCEYKYDGERAQIH L +G V
Sbjct: 352 VFNLLEHCKLTPGIPLKPMLAKPTKSMSEVLDRFQDEKFTCEYKYDGERAQIHLLPNGDV 411
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVR-SFVLDCEIVAYDREKQKILPFQTLSTRAR 535
IYSRN+E + ++PD++ + K S +LDCE VA+DR +KILPFQ LSTR R
Sbjct: 412 RIYSRNSEDMSQRYPDLISIIKEFSKSQEHTSLILDCEAVAWDRVNKKILPFQVLSTRKR 471
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K+V+ SDI V +C++AFD+LY N + LL L RR ++ G FQFAT+ S
Sbjct: 472 KDVNESDITVHICLFAFDLLYYNNESLLTRSLSERRSIMFAHLHPLEGKFQFATSKDSTS 531
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPI 654
L+ +Q FLD +V SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+ +GDSLDLV I
Sbjct: 532 LEVLQHFLDQSVHDSCEGLMVKMLEGNESYYEPSKRSRNWLKLKKDYLAGVGDSLDLVVI 591
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRP 714
A++G+GKRTG YG FLLA Y+ + + ++ CKIGTGFS+ ML + L I KP+
Sbjct: 592 GAYNGKGKRTGTYGGFLLASYNQDTGDLETTCKIGTGFSDEMLTQLYQKLHPSEIAKPKE 651
Query: 715 YYRFADTIS---PDVWFEPT 731
Y+ + T S PDVWFEPT
Sbjct: 652 YFVYDKTNSNAVPDVWFEPT 671
>gi|336374245|gb|EGO02582.1| hypothetical protein SERLA73DRAFT_175993 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387155|gb|EGO28300.1| hypothetical protein SERLADRAFT_458691 [Serpula lacrymans var.
lacrymans S7.9]
Length = 727
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/585 (43%), Positives = 374/585 (63%), Gaps = 15/585 (2%)
Query: 155 SAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITD 214
+AK +++ +VL K+K + W+ + VP+ L F +I R+ T
Sbjct: 70 AAKCNASQIVEGVVLQKEKV-----DLNGGWQADDPVPYAALVKAFSLIEATPKRLEKTA 124
Query: 215 IVCNMLRTVMETTP----EDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTE 270
++ +++ + + L+ VYL N+++P + G+ELGIG+ ++KA+ ++ GR+
Sbjct: 125 LLTTFFLLILQRSAIGDSKSLLQAVYLCINRLSPDYVGVELGIGENLLVKAIGQSTGRSA 184
Query: 271 SHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNR 330
+ +K +++ GDLGLVA S+ +Q + K PLTI VF + + IA +G SQ KK +
Sbjct: 185 AQIKADFKKEGDLGLVAMKSKKNQKTLFKAKPLTIPFVFSSLQEIATSSGHASQGKKVSI 244
Query: 331 IKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE----QHSKPPPNIQS 386
+ +L A E +Y++R L+ KLRIG AE+T+L AL AAV E Q P + +
Sbjct: 245 MVKILTACQGFEAKYIVRSLEGKLRIGNAERTVLVALAHAAVLAEMERDQAKWTPHELVN 304
Query: 387 PLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEI 446
L+EAA+++K V+S LP YEK++PALL G+ L + C TPGIP+ PMLAKPTK + E+
Sbjct: 305 RLDEAARVMKSVYSELPTYEKVIPALLEVGIACLHDRCKLTPGIPLKPMLAKPTKAIGEV 364
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
+++F+ M+FTCEYKYDGERAQ+H +EDG++ I+SRN+E + K+PD++ + R + S
Sbjct: 365 LHRFEGMDFTCEYKYDGERAQVHKMEDGTIGIFSRNSEDMSKKYPDLIEQLPRCIRASTN 424
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
SFV+D E VA ++ ++PFQ LS R RK+V D+ V VC+YAFD+LY NG+PLLQ+
Sbjct: 425 SFVIDAEAVAINKSTGMLMPFQHLSKRKRKDVRFQDVTVHVCLYAFDLLYLNGEPLLQKD 484
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDAT-Y 625
L+ RR L F+ PG F FA S +DEI+ FL+ ++ CEGL++K + D + Y
Sbjct: 485 LKKRRALLRQHFQSIPGEFDFAKASDSNTIDEIEAFLEESIKDGCEGLMVKMLASDNSYY 544
Query: 626 EPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSI 685
EPS+RS+NWLKLKKDY+ +GDSLDLV + ++G+GKR VYGAFLLACYD+N EEFQ+I
Sbjct: 545 EPSRRSVNWLKLKKDYLHGVGDSLDLVVVGGYYGKGKRANVYGAFLLACYDTNTEEFQTI 604
Query: 686 CKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
CKIGTGFSE L+ L+ R + A PDVWFEP
Sbjct: 605 CKIGTGFSEEQLQTHYDMLKPLQSLNIRGDIK-AGGAQPDVWFEP 648
>gi|328352626|emb|CCA39024.1| DNA ligase 1 [Komagataella pastoris CBS 7435]
Length = 1087
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/546 (46%), Positives = 364/546 (66%), Gaps = 15/546 (2%)
Query: 196 LSLVFDMISNETGRI----LITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE-GLE 250
L+ +F+ + E R+ + ++ +LR+ + T LV V+YL N++ P +E LE
Sbjct: 485 LTNIFEKLEQEPARLKNLAIASEFFLQILRSNHKRT---LVEVIYLMINRLGPDYELDLE 541
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
LG+G+ ++KA+AE GRT ++ + ++GD+GLVA+ SRS Q M K PLTI VF+
Sbjct: 542 LGLGETLLVKAIAEGTGRTPQRIRSELHKLGDIGLVAQNSRSRQPTMFKSKPLTIHSVFE 601
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
IAK +G SQ +K I +L E ++L+R L+ KLRI E+++L AL +A
Sbjct: 602 NLTKIAKSSGNASQARKIGLINQMLTTCEGSEAKFLMRSLEGKLRINFGEKSVLVALSKA 661
Query: 371 AVYNEQHSKPPPNIQSPLE--EAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
E SP E +A + +K+ FS +P YE IV L G+ NL+ C+ P
Sbjct: 662 FSEYEHELSSKKGHVSPQELVDAEEAIKKAFSQIPNYEIIVDEALKYGISNLATHCTLKP 721
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
GIP+ PMLAKPTK ++E+++ F EFTCEYKYDGERAQ+H EDG+V+IYSRN+E +
Sbjct: 722 GIPLKPMLAKPTKSITEVLDHFHGQEFTCEYKYDGERAQLHVQEDGTVKIYSRNSEDMSQ 781
Query: 489 KFPDVVLAVSRLKKP--SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
++PD++ VS++K V + +LDCE VA+D EK KILPFQ LSTR RK+V+ DIKV
Sbjct: 782 RYPDLIDVVSQIKTQCNGVITLILDCECVAWDGEKGKILPFQVLSTRKRKDVNAKDIKVQ 841
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFDIL+ NG+ LL+ L+ RR+ L+++ + G FQFA + + ++ EIQ FLD +
Sbjct: 842 VCLFAFDILFLNGKSLLELPLKERRKILHENVKPIEGKFQFAEAMDADNVAEIQHFLDQS 901
Query: 607 VDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
V SCEGL++K +D D + YEPSKRS+NWLKLKKDY+E +GDSLDL + + G+GKRTG
Sbjct: 902 VKDSCEGLMVKMLDGDKSHYEPSKRSVNWLKLKKDYLEGVGDSLDLAVVGGYIGKGKRTG 961
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
YG FLLACY+ ++ E+++ CKIGTGFSE ML+ S +L+ VI +P+P+Y + SPD
Sbjct: 962 WYGGFLLACYNEDSGEYETCCKIGTGFSEEMLQTLSGTLKPTVIQQPKPFYVY--DASPD 1019
Query: 726 VWFEPT 731
VWFEPT
Sbjct: 1020 VWFEPT 1025
>gi|68491090|ref|XP_710637.1| hypothetical protein CaO19.6155 [Candida albicans SC5314]
gi|46431866|gb|EAK91388.1| hypothetical protein CaO19.6155 [Candida albicans SC5314]
Length = 770
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/560 (46%), Positives = 366/560 (65%), Gaps = 23/560 (4%)
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNM-LRTVMETTPEDLVPVVYLAANKIAPAH 246
G ++P+ L+ VF+ I NE+ R+ I I+ L + ++T + L+ +VYL N++ P +
Sbjct: 154 GVKIPYAKLASVFEAIENESSRLAIIAIISQFFLEVLQQSTIDKLIRIVYLCINRLGPDY 213
Query: 247 E-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTI 305
E GLELG+G+ +IKA++E GR S +K Y+ GDLGL+A+ SRS Q M K PL +
Sbjct: 214 EPGLELGLGETILIKAISECYGRETSKIKADYKSTGDLGLIAQKSRSLQPTMFKTAPLDV 273
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT--DCEPQYLIRLLQSKLRIGLAEQTL 363
VFD IAK GK+SQ KK + IK +L A E ++LIR LQ KLRIG AE+++
Sbjct: 274 DTVFDNSLKIAKSTGKESQSKKISIIKQMLTACQMKSSEAKFLIRSLQGKLRIGSAEKSI 333
Query: 364 LAALGQAAVY--NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLS 421
+ L QA V N+ + K P S L EA +I+K+ FS +P YE ++ G++NL
Sbjct: 334 IVGLAQAFVNYENKSNKKIDP---SKLAEAEEIMKEAFSRVPNYEVVLKTAYQYGIFNLL 390
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
C TPGIP+ PMLA PTK + E++++FQ+ EFTCEYKYDG RAQ+H L DGS++++SR
Sbjct: 391 EHCFVTPGIPLKPMLANPTKSIGEVLDRFQNEEFTCEYKYDGVRAQVHILSDGSIKVFSR 450
Query: 482 NAERNTGKFPDVV-----LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
N E T +PD++ AVS + S +LDCE VA+DRE KILPFQ L+TR RK
Sbjct: 451 NLEDMTQTYPDLISIGKQFAVS----GNTISMILDCEAVAWDREDHKILPFQKLTTRKRK 506
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT-TLTSID 595
+V+ DIKV +C++AFD+LY + + LL + L RR+ + ++ FQFAT T +S +
Sbjct: 507 DVNEEDIKVQICLFAFDLLYYDNESLLPKSLAERRKIMQENLSPIEDRFQFATATNSSSN 566
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPI 654
L+ +Q+FLD ++ SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+E +GDSLDLV I
Sbjct: 567 LEVLQQFLDQSIKDSCEGLMVKMLNGSESFYEPSKRSRNWLKLKKDYLEGVGDSLDLVVI 626
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRP 714
A++G+GKRTG YG FLLA Y+ ++ + ++ CKIGTGFS+ L + L I P+
Sbjct: 627 GAYNGKGKRTGTYGGFLLASYNEDSGDLETCCKIGTGFSDEDLLNLYNKLHPTEIASPKN 686
Query: 715 YYRFADTIS---PDVWFEPT 731
Y+ + S PDVWFEP+
Sbjct: 687 YFVYDTNNSNAVPDVWFEPS 706
>gi|451848363|gb|EMD61669.1| hypothetical protein COCSADRAFT_96111 [Cochliobolus sativus ND90Pr]
Length = 883
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/583 (43%), Positives = 365/583 (62%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F I T R+ I LR V+ TP D++P V L NK+A
Sbjct: 221 WKPGEPVPYAALCTTFSKIEMTTKRLEILAHCSLFLRQVLRLTPSDMLPTVMLMVNKLAA 280
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA++E+ GR+ H+K E+GDLGLVA SRS Q M KP LT
Sbjct: 281 DYAGIELGIGESLIMKAISESTGRSLQHIKSDQNEIGDLGLVAAKSRSKQPTMFKPKALT 340
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD----------------CEPQYLIR 348
+ V IA G+ +Q +K + IK LL AA E ++++R
Sbjct: 341 VEGVRKGLMAIATIEGQGAQGRKVDGIKKLLSAADAHNSGKNVDIEKDKGGPSEAKFIVR 400
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ KLR+GLAE+T++ A+ QA +++E + L +A ++K V+S LP YE I
Sbjct: 401 TLEGKLRLGLAERTVVVAVAQAMIFHEMSLQGKTPSTEDLGKAEAMLKTVYSELPSYEVI 460
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+PA++ G+ NL C PG+P+ PMLAKPTK ++E++++F+ +FTCEYKYDGERAQI
Sbjct: 461 IPAMIEHGIMNLRENCRLQPGVPLKPMLAKPTKSITEVLDRFEGKDFTCEYKYDGERAQI 520
Query: 469 HYL------------------EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
H++ E G I+SRN+E + K+PD++ + K +SFVL
Sbjct: 521 HFVAHDAEIELATEAPSAGKSERGVSNIFSRNSEDLSKKYPDILAKLPTWVKEGTKSFVL 580
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D ++K+LPFQ L TR RK+V + D+KV VC++AFDILY NG+ L+ + R R
Sbjct: 581 DCETVAWDMVEKKVLPFQQLMTRKRKDVKVEDVKVKVCVFAFDILYLNGEALVTKSFRER 640
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSK 629
REHL ++F G F FA + +L+EIQ L+ +V CEGL++K +D ++ YEPSK
Sbjct: 641 REHLKEAFVPVEGEFAFAKYGNTNELEEIQTLLEDSVKEGCEGLMVKMLDGPESYYEPSK 700
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ +GDSLDLV + A++G+GKRT YGAFLLACY+ + E+++++C IG
Sbjct: 701 RSQNWLKVKKDYLAGVGDSLDLVVLGAYYGKGKRTSWYGAFLLACYNPSTEKYETVCNIG 760
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
TGFSEA+LE +L VI +P+P+Y + PDVWFEP
Sbjct: 761 TGFSEAILETLHKTLSEIVIDRPKPFYTHSTGNKDQPDVWFEP 803
>gi|326469593|gb|EGD93602.1| DNA ligase [Trichophyton tonsurans CBS 112818]
Length = 859
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 251/528 (47%), Positives = 337/528 (63%), Gaps = 45/528 (8%)
Query: 246 HEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTI 305
+ G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP LT+
Sbjct: 248 YAGIELGIGESLIMKAIGESTGRSLAVIKADQNEIGDLGLVAAKSRSNQPTMFKPKALTV 307
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-------------------TDCEPQYL 346
V + IAK G SQEKK IK LL AA E +++
Sbjct: 308 RGVHEGLLAIAKTHGTGSQEKKIAGIKKLLSAADADKTGKGSKTIDITKNRGGASEAKFI 367
Query: 347 IRLLQSKLRIGLAEQTLLAALGQAAVYNEQH---SKPPPNIQSPLEEAAKIVKQVFSVLP 403
+R L+ KLR+GLAE+T+L AL A V +E KPP Q L + I+K V+S LP
Sbjct: 368 VRFLEGKLRLGLAERTVLVALAHAMVAHEAEMDGGKPPSTDQ--LGKGEDILKTVYSELP 425
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
YE I+PA+L G++NL + C PG+P+ PMLAKPTK +SE++++F+ FTCEYKYDG
Sbjct: 426 SYEVIIPAMLKHGIFNLPDNCKLQPGVPLKPMLAKPTKSISEVLDRFEGKHFTCEYKYDG 485
Query: 464 ERAQIHYLE------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSV 505
ERAQIHY+ +G ++SRN+E + K+PD++ + KP
Sbjct: 486 ERAQIHYISRDTIKEYPAASTTLQKDGEGLCAVFSRNSEDLSKKYPDILEKLEAWVKPGT 545
Query: 506 RSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQE 565
+SFV+DCE VA+D +K+LPFQ L TR RK+V DIKV VC++AFD+L+ NG+P +++
Sbjct: 546 QSFVVDCETVAWDTVNKKVLPFQQLMTRKRKDVKSEDIKVKVCVFAFDLLFLNGEPTVKK 605
Query: 566 QLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDAT 624
LR RR L+D+F G F FA + DL+EIQ LD +V ASCEGL++K +D D+
Sbjct: 606 TLRERRALLHDAFVPVEGEFAFAQHGNTSDLEEIQTMLDESVKASCEGLMVKMLDTEDSG 665
Query: 625 YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQS 684
YEPSKRS NWLK+KKDY+ IGDSLDLV + A+ GRGKRT VYGAFLLA Y+ + +++
Sbjct: 666 YEPSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYFGRGKRTSVYGAFLLAAYNPKTQNYET 725
Query: 685 ICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
IC IGTGFSEA+LEE +L VI KP+P+Y + PDVWFEP
Sbjct: 726 ICNIGTGFSEALLEELHETLSPLVIDKPKPFYSHSTVPKDQPDVWFEP 773
>gi|359488141|ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
Length = 1449
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/575 (42%), Positives = 361/575 (62%), Gaps = 22/575 (3%)
Query: 176 EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
++ P ACW+ G+ P++ L+ FD++ E G+I ++CNM R+++ +PED++P V
Sbjct: 805 KYSPIEHACWKLGQPAPYLHLARTFDLVEGEKGKIKAASMLCNMFRSLLALSPEDVIPAV 864
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL NKIA HE +EL IG + + A+ EACG + S ++ Y +GDLG VA+ R +QS
Sbjct: 865 YLCTNKIAADHENMELNIGGSIVTSAMEEACGTSRSKIRAMYNSLGDLGDVAQVCRQTQS 924
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
+ P PL I VF R I+ + G S +KK+ I L+ + + E ++L+R L LR
Sbjct: 925 FLAPPSPLLIKDVFSMLRNISVQTGSGSIVRKKSLILNLMRSCREKEIKFLVRTLVRNLR 984
Query: 356 IGLAEQTLLAALGQAAVY----NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPA 411
IG +T+L AL QA V N H NI+ L+ + V + +++LP + ++P+
Sbjct: 985 IGAMMRTVLPALAQAVVLHSSPNFYHKGTTENIKEKLQCLSAAVVEAYNILPNLDLLIPS 1044
Query: 412 LLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL 471
LL G+ S++ S PGIPI PMLAK T GV + + FQ+ FTCEYKYDG+RAQIH L
Sbjct: 1045 LLDKGIGFSSSSLSMVPGIPIKPMLAKITNGVPQALKLFQNKAFTCEYKYDGQRAQIHKL 1104
Query: 472 EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK-QKILPFQTL 530
DGSV I+SRN + T +FPD+V V KP +F+LD E+VA DR+ K++ FQ L
Sbjct: 1105 VDGSVRIFSRNGDETTSRFPDLVSVVRESCKPDALTFILDAEVVAIDRKNGSKLMSFQEL 1164
Query: 531 STRARKN----VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEP-GFF 585
S+R R + ++L IKVD+C++ FDI++ NG+ LL LR RR++L D F + G+F
Sbjct: 1165 SSRERGSKDSLITLDSIKVDICVFVFDIMFANGKQLLDIPLRQRRKYLKDLFNNQKLGYF 1224
Query: 586 QFA--TTLTSID-------LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLK 636
++A TT+ + D L +I FL+ A +SCEG++IK++D DA Y PSKR+ WLK
Sbjct: 1225 EYAEETTVEADDASTNEATLTKINLFLEEAFRSSCEGIMIKSLDIDAGYSPSKRTDTWLK 1284
Query: 637 LKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
+K+DY+E + DSLDLVPI A+HG G++ G Y FL+ACY+ + EEFQS+C++ +GFS+
Sbjct: 1285 VKRDYVEGLNDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPDTEEFQSVCRVMSGFSDNF 1344
Query: 697 LEERSSSLR-SKVIPKPRPYYRFADTISPDVWFEP 730
+E K++ K PYY+ A+ PD+WF P
Sbjct: 1345 YKEMKEFFNEDKILSKKPPYYQTAEL--PDMWFTP 1377
>gi|451998999|gb|EMD91462.1| hypothetical protein COCHEDRAFT_1101602 [Cochliobolus
heterostrophus C5]
Length = 888
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/583 (43%), Positives = 364/583 (62%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F I T R+ I LR V+ TP D++P V L NK+A
Sbjct: 226 WKPGEPVPYAALCTTFSKIEMTTKRLEILAHCSLFLRQVLRLTPSDMLPTVMLMVNKLAA 285
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA++E+ GR+ H+K E+GDLGLVA SRS Q M KP LT
Sbjct: 286 DYAGIELGIGESLIMKAISESTGRSLQHIKSDQNEIGDLGLVAAKSRSKQPTMFKPKALT 345
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD----------------CEPQYLIR 348
+ V IA G+ +Q +K + IK LL AA E ++++R
Sbjct: 346 VEGVRKGLMAIATIEGQGAQGRKVDGIKKLLSAADAHNSGKNIDIEKDKGGPSEAKFIVR 405
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ KLR+GLAE+T++ A+ QA +++E + L +A ++K V+S LP YE I
Sbjct: 406 TLEGKLRLGLAEKTVVVAVAQAMIFHEMSLQGKTPSTEDLGKAEAMLKTVYSELPSYEVI 465
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+PA++ G+ NL C PG+P+ PMLAKPTK ++E++++F+ +FTCEYKYDGERAQI
Sbjct: 466 IPAMIEHGIMNLRENCRLQPGVPLKPMLAKPTKSITEVLDRFEGKDFTCEYKYDGERAQI 525
Query: 469 HYL------------------EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
H++ E G I+SRN+E + K+PD++ + K +SFVL
Sbjct: 526 HFVAHDAKIELATEAPSAGKSERGVSNIFSRNSEDLSKKYPDILAKLPTWVKQGTKSFVL 585
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D ++K+LPFQ L TR RK+V + D+KV VC++AFDILY NG+ L+ R R
Sbjct: 586 DCETVAWDMVEKKVLPFQQLMTRKRKDVKVEDVKVKVCVFAFDILYLNGEALVTNSFRER 645
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSK 629
REHL ++F G F FA + +L+EIQ L+ +V CEGL++K +D ++ YEPSK
Sbjct: 646 REHLKEAFVPVEGEFAFAKYGNTNELEEIQTLLEDSVKEGCEGLMVKMLDGPESYYEPSK 705
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ +GDSLDLV + A++G+GKRT YGAFLLACY+ + E+++++C IG
Sbjct: 706 RSQNWLKVKKDYLAGVGDSLDLVVLGAYYGKGKRTSWYGAFLLACYNPSTEKYETVCNIG 765
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
TGFSEA+LE +L VI +P+P+Y + PDVWFEP
Sbjct: 766 TGFSEAILETLHKTLSEIVIDRPKPFYTHSTGNKDQPDVWFEP 808
>gi|405965797|gb|EKC31151.1| DNA ligase 1 [Crassostrea gigas]
Length = 905
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/466 (49%), Positives = 311/466 (66%), Gaps = 12/466 (2%)
Query: 290 SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRL 349
SRSSQ M P LT+ VF+ + IA +G + KK +IK + VA CE +YLIR
Sbjct: 373 SRSSQRTMFAPPKLTVPAVFNKLKEIAGMSGNAAMTKKIEKIKGMFVACRQCEARYLIRS 432
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQ 397
L KLRIGLAEQ++L ALG A + PP + + +EE ++K
Sbjct: 433 LGGKLRIGLAEQSVLTALGNAVFRTPPDQEFPPEVLDAGKGMGADTLKKKMEECTLVIKT 492
Query: 398 VFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC 457
+ P Y+ I+PAL+ G+ L N C TPG+P+ PMLA PTKGVSE+ +F + +FTC
Sbjct: 493 TYCECPNYDAIIPALIKYGIEELPNHCKLTPGVPLKPMLAHPTKGVSEVFKRFDEADFTC 552
Query: 458 EYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY 517
EYKYDGERAQIH LE+G V IYSRN+E NT K+PD++ + +++ SV S V+D E VA+
Sbjct: 553 EYKYDGERAQIHILENGEVHIYSRNSENNTSKYPDIIARIPKVRNDSVTSCVIDSEAVAW 612
Query: 518 DREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDS 577
D EK++I PFQ LS R RK+ S+IK+ VC+YAFD+L+ NG+ L++E R RRE L+ S
Sbjct: 613 DAEKKQIQPFQVLSHRKRKDADASEIKIQVCVYAFDLLFLNGKSLVKEPFRKRRELLHSS 672
Query: 578 FEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKL 637
F+E G F FA ++ S + DEI +FLD +V +CEGL++KT+D DATYE +KRS NWLKL
Sbjct: 673 FKEVEGEFVFAKSMISSNTDEIAEFLDESVKGNCEGLMVKTLDVDATYEIAKRSHNWLKL 732
Query: 638 KKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
KKDY++ +GD+LDLV + F G GKRTG YG FLL CYD NEEFQSICKIGTGF++A L
Sbjct: 733 KKDYLDGVGDTLDLVVMGGFLGTGKRTGKYGGFLLGCYDEENEEFQSICKIGTGFTDADL 792
Query: 698 EERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
E+ ++ + V KP+PYYR+ ++ PD WF+ + E + SI
Sbjct: 793 EKHATFFKDHVTEKPKPYYRYDSSVEPDHWFDAVQVWEVKCADLSI 838
>gi|238880520|gb|EEQ44158.1| DNA ligase I, mitochondrial precursor [Candida albicans WO-1]
Length = 772
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 253/554 (45%), Positives = 362/554 (65%), Gaps = 11/554 (1%)
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNM-LRTVMETTPEDLVPVVYLAANKIAPAH 246
G ++P+ L+ +F+ I NE+ R+ I I+ L + ++T + L+ +VYL N++ P +
Sbjct: 156 GVKIPYAKLASIFEAIENESSRLAIIAIISQFFLEVLQQSTIDKLIRIVYLCINRLGPDY 215
Query: 247 E-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTI 305
E GLELG+G+ +IKA++E GR S +K Y+ GDLGL+A+ SRS Q M K PL +
Sbjct: 216 EPGLELGLGETILIKAISECYGRETSKIKADYKSTGDLGLIAQKSRSLQPTMFKTAPLDV 275
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT--DCEPQYLIRLLQSKLRIGLAEQTL 363
VFD IAK GK+SQ KK + IK +L A E ++LIR LQ KLRIG AE+++
Sbjct: 276 DTVFDNSLKIAKSTGKESQSKKISIIKQMLTACKMKSSEAKFLIRSLQGKLRIGSAEKSI 335
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
+ L QA V E S + S L EA +I+K+ FS +P YE ++ G++NL
Sbjct: 336 IVGLAQAFVNYENKSNKKID-PSKLAEAEEIMKEAFSRVPNYEVVLKTAYQYGIFNLLEH 394
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
C TPGIP+ PMLA PTK + E++++FQ+ EFTCEYKYDG RAQ+H L DGS++++SRN
Sbjct: 395 CFVTPGIPLKPMLANPTKSIGEVLDRFQNEEFTCEYKYDGVRAQVHILSDGSIKVFSRNL 454
Query: 484 ERNTGKFPDVVLAVSRLK-KPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
E T +PD++ + + S +LDCE VA+DRE KILPFQ L+TR RK+V+ D
Sbjct: 455 EDMTQTYPDLISIGKQFAVGGNAISMILDCEAVAWDREDHKILPFQKLTTRKRKDVNEED 514
Query: 543 IKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT-TLTSIDLDEIQK 601
IKV +C++AFD+LY + + LL + L RR+ + ++ FQFAT T +S +L+ +Q+
Sbjct: 515 IKVQICLFAFDLLYYDNESLLPKSLAERRKIMQENLSPIEDRFQFATATNSSSNLEVLQQ 574
Query: 602 FLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
FLD ++ SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+E +GDSLDLV I A++G+
Sbjct: 575 FLDQSIKDSCEGLMVKMLNGSESFYEPSKRSRNWLKLKKDYLEGVGDSLDLVVIGAYNGK 634
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD 720
GKRTG YG FLLA Y+ ++ + ++ CKIGTGFS+ L + L I P+ Y+ +
Sbjct: 635 GKRTGTYGGFLLASYNEDSGDLETCCKIGTGFSDEDLLNLYNKLHPTEIASPKNYFVYDT 694
Query: 721 TIS---PDVWFEPT 731
S PDVWFEP+
Sbjct: 695 NNSNAVPDVWFEPS 708
>gi|296087222|emb|CBI33596.3| unnamed protein product [Vitis vinifera]
Length = 1390
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/575 (42%), Positives = 361/575 (62%), Gaps = 22/575 (3%)
Query: 176 EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
++ P ACW+ G+ P++ L+ FD++ E G+I ++CNM R+++ +PED++P V
Sbjct: 746 KYSPIEHACWKLGQPAPYLHLARTFDLVEGEKGKIKAASMLCNMFRSLLALSPEDVIPAV 805
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL NKIA HE +EL IG + + A+ EACG + S ++ Y +GDLG VA+ R +QS
Sbjct: 806 YLCTNKIAADHENMELNIGGSIVTSAMEEACGTSRSKIRAMYNSLGDLGDVAQVCRQTQS 865
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
+ P PL I VF R I+ + G S +KK+ I L+ + + E ++L+R L LR
Sbjct: 866 FLAPPSPLLIKDVFSMLRNISVQTGSGSIVRKKSLILNLMRSCREKEIKFLVRTLVRNLR 925
Query: 356 IGLAEQTLLAALGQAAVY----NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPA 411
IG +T+L AL QA V N H NI+ L+ + V + +++LP + ++P+
Sbjct: 926 IGAMMRTVLPALAQAVVLHSSPNFYHKGTTENIKEKLQCLSAAVVEAYNILPNLDLLIPS 985
Query: 412 LLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL 471
LL G+ S++ S PGIPI PMLAK T GV + + FQ+ FTCEYKYDG+RAQIH L
Sbjct: 986 LLDKGIGFSSSSLSMVPGIPIKPMLAKITNGVPQALKLFQNKAFTCEYKYDGQRAQIHKL 1045
Query: 472 EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK-QKILPFQTL 530
DGSV I+SRN + T +FPD+V V KP +F+LD E+VA DR+ K++ FQ L
Sbjct: 1046 VDGSVRIFSRNGDETTSRFPDLVSVVRESCKPDALTFILDAEVVAIDRKNGSKLMSFQEL 1105
Query: 531 STRARKN----VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEP-GFF 585
S+R R + ++L IKVD+C++ FDI++ NG+ LL LR RR++L D F + G+F
Sbjct: 1106 SSRERGSKDSLITLDSIKVDICVFVFDIMFANGKQLLDIPLRQRRKYLKDLFNNQKLGYF 1165
Query: 586 QFA--TTLTSID-------LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLK 636
++A TT+ + D L +I FL+ A +SCEG++IK++D DA Y PSKR+ WLK
Sbjct: 1166 EYAEETTVEADDASTNEATLTKINLFLEEAFRSSCEGIMIKSLDIDAGYSPSKRTDTWLK 1225
Query: 637 LKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
+K+DY+E + DSLDLVPI A+HG G++ G Y FL+ACY+ + EEFQS+C++ +GFS+
Sbjct: 1226 VKRDYVEGLNDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPDTEEFQSVCRVMSGFSDNF 1285
Query: 697 LEERSSSLR-SKVIPKPRPYYRFADTISPDVWFEP 730
+E K++ K PYY+ A+ PD+WF P
Sbjct: 1286 YKEMKEFFNEDKILSKKPPYYQTAEL--PDMWFTP 1318
>gi|407926519|gb|EKG19486.1| DNA ligase ATP-dependent [Macrophomina phaseolina MS6]
Length = 985
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/596 (43%), Positives = 371/596 (62%), Gaps = 45/596 (7%)
Query: 178 DPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYL 237
D ++ W+ GE VP+ L F I T R+ I+ R V+ TPEDL+P V L
Sbjct: 313 DNELYPDWKAGEPVPYAALCAAFSKIEMTTKRLEISAYCSKFFRQVLRLTPEDLLPTVLL 372
Query: 238 AANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM 297
NK+A + G+ELGIG++ I+K++ E GR+ + +K E+GDLGLVA SRS+Q M
Sbjct: 373 MVNKLAADYAGIELGIGESLIMKSIGETTGRSLAVIKADQTEIGDLGLVAAKSRSNQPTM 432
Query: 298 RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC---------------- 341
KP PLT+ V IA G+ SQ +K IK LL +A+D
Sbjct: 433 FKPKPLTVRGVHKGLLEIATIEGQGSQGRKVAGIKKLL-SASDAHLAGKGGRGVDIYKDK 491
Query: 342 ----EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH--SKPPPNIQSPLEEAAKIV 395
E ++++R+L+ KLR+GLA++++L +L A V E + PN + L + +I+
Sbjct: 492 GGASEAKFIVRMLEGKLRLGLADKSVLVSLAHAMVAYELDPTGQKVPNTEQ-LAKGERIL 550
Query: 396 KQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEF 455
K V+S LP YE I+PA+L G+ NL C PG+P+ PMLAKPTK ++E++++F+ F
Sbjct: 551 KSVYSELPSYEVIIPAMLKHGLSNLREHCKLQPGVPLKPMLAKPTKSITEVLDRFEGKHF 610
Query: 456 TCEYKYDGERAQIHYL------------------EDGSVEIYSRNAERNTGKFPDVVLAV 497
TCEYKYDGERAQIH++ + G I+SRN+E + K+PD++ +
Sbjct: 611 TCEYKYDGERAQIHFVSHDAAQDYATEAPSAGKTDRGISNIFSRNSEDLSKKYPDILAKL 670
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYR 557
K +SFVLDCE VA+D +++K+LPFQTL TR RK+V + D+KV VC++AFD+LY
Sbjct: 671 PTWVKEGTKSFVLDCETVAWDIDEKKVLPFQTLMTRKRKDVKVEDVKVKVCVFAFDLLYL 730
Query: 558 NGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIK 617
NGQ L+ + R RRE L+ SF G F +A + +LDEIQ+ L+ +V ASCEGL++K
Sbjct: 731 NGQALVNKPFRERRELLHASFSPVEGEFAYAEYGDTNELDEIQELLEKSVKASCEGLMVK 790
Query: 618 TMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYD 676
+D +++YEPSKRS NWLK+KKDY+ +GDSLDLV + A+ GRGKRT VYGAFLLACY+
Sbjct: 791 MLDGPESSYEPSKRSQNWLKVKKDYLSGVGDSLDLVVLGAYFGRGKRTSVYGAFLLACYN 850
Query: 677 SNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
+ E ++++C IGTGFS+ +L L +I +P+P+Y + PDVWFEP
Sbjct: 851 TTTESYETVCNIGTGFSDEVLASLHEQLSQHIIDRPKPFYSHSQGNKDQPDVWFEP 906
>gi|393247839|gb|EJD55346.1| ATP-dependent DNA ligase [Auricularia delicata TFB-10046 SS5]
Length = 605
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/523 (47%), Positives = 341/523 (65%), Gaps = 12/523 (2%)
Query: 219 MLRTVMETTPED---LVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKK 275
++ + + P+D L+ VYL N++ P +EG ELGIG++ +IKA+A A GRT +K
Sbjct: 4 LILVIQRSAPDDRETLLKCVYLCINRLYPDYEGKELGIGESLLIKAIASATGRTADAIKT 63
Query: 276 QYQEMGDLGLVAKASRSSQSMMR---KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
++ GDLGLVA S+ +Q ++ K PLT+ VFDT + IA AG SQ K I
Sbjct: 64 DMKKEGDLGLVAVNSKKNQKALKGFLKEKPLTVKSVFDTLQTIANTAGNSSQASKIGHIS 123
Query: 333 ALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK----PPPNIQSPL 388
+L D E +Y+IR L+ KLRIG AE+++L +L A V E+ + L
Sbjct: 124 KMLGMCKDLEAKYIIRSLEGKLRIGNAERSVLISLSHAVVLAEKDKALKKWSKEKTAARL 183
Query: 389 EEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVN 448
E+A+ +VKQVFS LP Y ++PALL G+ L+ C TPG+P+ PMLAKPTK + E++N
Sbjct: 184 EQASNVVKQVFSELPNYNLVIPALLEVGIDGLAERCKLTPGVPLKPMLAKPTKAIGEVLN 243
Query: 449 KFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSF 508
+F++ FTCEYKYDGERAQ+H +E+G + +YSRN+E + K+P++V + +SF
Sbjct: 244 RFEEKRFTCEYKYDGERAQVHRVENGKMFVYSRNSEDMSKKYPELVDHFPKCFTEKTKSF 303
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
VLD E VA DR K+LPFQ LS R RK+V + DI+V VC++AFD+L+ NG+PLL + L
Sbjct: 304 VLDAEAVAVDRTTGKLLPFQELSKRKRKDVKIEDIQVRVCLFAFDLLFLNGEPLLHKTLE 363
Query: 569 VRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDAT-YEP 627
RRE L + F PG F FA + +EIQ FL+ ++ CEGL++K + DA+ YEP
Sbjct: 364 ERRELLREHFTVVPGEFDFAKSSDGETTEEIQLFLEESIKDGCEGLMVKMLQSDASYYEP 423
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
S+RS+NWLKLKKDY+ +GDSLDLV + A+HG GKRTGVYGAFLLACYD + EEFQ+ICK
Sbjct: 424 SRRSVNWLKLKKDYLAGVGDSLDLVVVGAYHGAGKRTGVYGAFLLACYDPDTEEFQTICK 483
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
IGTGFSE L+ +LR + R R A PDVW EP
Sbjct: 484 IGTGFSEEALKAHHETLRELEVAVCRGDVR-AGGAKPDVWLEP 525
>gi|342181689|emb|CCC91169.1| putative DNA ligase I, partial [Trypanosoma congolense IL3000]
Length = 710
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/571 (43%), Positives = 353/571 (61%), Gaps = 18/571 (3%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
+ VP+ ++ IS E R+ ++ N L V++ +P DL+PVVYL NK PAHEG
Sbjct: 79 DTVPYAAVADTLADISGEDSRLECIRLLSNFLVAVIQRSPNDLLPVVYLVMNKQGPAHEG 138
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELG+GDA ++K +AE CG TE+H K+ Y++ GDL VA++ + +QS + KP L+ V
Sbjct: 139 IELGVGDALLMKVVAECCGITEAHAKEAYRQTGDLAEVAQSKKRAQSTLVKPKRLSAVAV 198
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F R IA GKD+ ++ + IK LL A E ++R LQ KLR+GLAE ++LAA+G
Sbjct: 199 FQALRDIALMNGKDAARRRGDVIKRLLRDAVGPEVNLIVRALQQKLRVGLAETSVLAAVG 258
Query: 369 QAAVYNEQH-----SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL--- 420
A N S P +Q L A + ++ +P + ++ ALL G+ +
Sbjct: 259 YAFAMNHIGVGNILSLSPEQLQRELNVGATHFARTYNEVPCLDVVLGALLKHGLNVIIPS 318
Query: 421 -------SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
+ S PG+P+ P LA PT G+S I+N+F FT EYKYDGERAQIHY ++
Sbjct: 319 SPEAKAHAQALSVRPGLPVKPQLAHPTSGISVILNRFNGKSFTSEYKYDGERAQIHYTKE 378
Query: 474 GSVEIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLST 532
V+I+SRN+E NTGK+PD+V L +V SF++D E+VA D + FQ L
Sbjct: 379 KGVQIFSRNSETNTGKYPDIVSLLPEVFSSDTVDSFIIDSEVVAVDSVTGALQAFQVLQH 438
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
R RKNVS + + VC++AFDILY NG+PL+ + L RR+ L+ F FQFA L
Sbjct: 439 RGRKNVSSDSVTIPVCVFAFDILYFNGEPLMTKSLAQRRDVLHTHFRPIQARFQFAEHLD 498
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
S D+D+IQ FLD A+ EGL++KT++ +ATY P+KRS WLKLKKDY++ + D+LDLV
Sbjct: 499 SNDVDDIQTFLDRAIKDGTEGLMVKTLEEEATYVPAKRSHFWLKLKKDYMDGVTDTLDLV 558
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKP 712
PI A++G+GKRTGV+G FLL+CYD+ ++E+QSICKIGTGF + LE + SL + V+
Sbjct: 559 PIGAYYGKGKRTGVFGGFLLSCYDTESDEYQSICKIGTGFQDEQLESITKSLGASVLEDQ 618
Query: 713 RPYYRFADTISPDVWFEPTERPETSNSPASI 743
YYR D PDVW + ++ E + SI
Sbjct: 619 PRYYRTDD--KPDVWLQASQVWEVKAADLSI 647
>gi|348666069|gb|EGZ05897.1| hypothetical protein PHYSODRAFT_532805 [Phytophthora sojae]
Length = 3954
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 260/595 (43%), Positives = 359/595 (60%), Gaps = 62/595 (10%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAAN-KIAPAHEGL 249
P+ L+ +F I TGR++I D++ R V+ +P+DL+ +YL +AP E L
Sbjct: 256 TPYFALAHLFAKIEEVTGRLVIQDLLTAFFRDVIRRSPDDLLACIYLCVCVDLAPPFENL 315
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMR---------KP 300
++GIGDA ++KA+ EA G +K+ Y + GDLG VA+ +RS Q + K
Sbjct: 316 KIGIGDAILMKAIGEATGANLKFIKEMYHKEGDLGKVAQNARSKQKTLSFASIKPAASKG 375
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQ---------------Y 345
LT+ V++ F IAK G +SQ++K + IK LLV CE + Y
Sbjct: 376 SGLTVQHVYNQFVKIAKMTGNNSQQQKCSIIKGLLVK---CEKEKKSQASGAQSAEGAKY 432
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVY 405
+IR LQ KLRIGLAE+++L L A + ++ + +EA VK+ F+ P Y
Sbjct: 433 IIRGLQGKLRIGLAEKSILMGLTYAFMTDKTYKDKDKQ-----QEALAYVKKAFAECPSY 487
Query: 406 EKIV-------------PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
+V P L ++ C TPG P+ PMLA+PTK + + ++F+
Sbjct: 488 NALVAAFYEVQKEVPNAPFLRVKDFAKVAEKCVLTPGTPVSPMLARPTKAYAMVFDRFEG 547
Query: 453 MEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRL--KKPSVRSFVL 510
FTCEYKYDGERAQIH L +G + I+SRN E +T +FPDV LA+S KK V+S ++
Sbjct: 548 KPFTCEYKYDGERAQIHILPNGEIAIFSRNFENSTERFPDVKLAISEATKKKGIVKSCIV 607
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
D E+VA DR K LPFQ LSTR+RKNV + DIKV VCIYAFD+L+ NG+ L L R
Sbjct: 608 DAEVVAVDRATNKRLPFQILSTRSRKNVKVEDIKVPVCIYAFDLLFLNGESFLATPLAKR 667
Query: 571 REHLYDSFEEEPGFFQFATTL------------TSID--LDEIQKFLDAAVDASCEGLII 616
RE L D FE +PG F+FAT+L +ID +D+++ FL+ AV +CEGL++
Sbjct: 668 REKLRDMFEVKPGNFEFATSLDVEDCVDVKNNPEAIDEAVDKVRTFLEEAVRENCEGLMV 727
Query: 617 KTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYD 676
KT++++ATYEP+ RS WLKLKKDY++ IGDS DLVPI AFHGRGKRTGVYGA+LLACYD
Sbjct: 728 KTLEKEATYEPANRSHKWLKLKKDYLDGIGDSADLVPIGAFHGRGKRTGVYGAYLLACYD 787
Query: 677 SNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
+ E +Q I K+GTG S+ +L++ L+ KV+ K Y + I PDVWFE +
Sbjct: 788 PDTEMYQPITKLGTGLSDEVLKQFHDQLKEKVVDKRPSDYAIGEGIKPDVWFEAS 842
>gi|169607761|ref|XP_001797300.1| hypothetical protein SNOG_06940 [Phaeosphaeria nodorum SN15]
gi|160701485|gb|EAT85591.2| hypothetical protein SNOG_06940 [Phaeosphaeria nodorum SN15]
Length = 856
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/585 (43%), Positives = 349/585 (59%), Gaps = 68/585 (11%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ G+ VP+ L F I T R+ I LR V+ TP DL+P L NK+A
Sbjct: 221 WKAGDPVPYAALCTTFSKIEMTTKRLEILAHCSLFLRQVLRLTPSDLLPTTLLMINKLAA 280
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I KA++E+ GRT H+ + E+GDLGLVA SRS Q M KP PLT
Sbjct: 281 DYTGVELGIGESLIKKAISESTGRTLQHINSDHNEIGDLGLVAAKSRSKQPTMFKPKPLT 340
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD----------------CEPQYLIR 348
I V IA G+ +Q +K + IK LL AA E ++++R
Sbjct: 341 IQGVHKGLLAIATIEGQGAQGRKVDGIKKLLSAADSHNAGKHIDIEENKGGPSESKFIVR 400
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNE--QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYE 406
L+ KLR+GLAE+T++ AL QA +++E Q+ K P + L A I+K V+S LP YE
Sbjct: 401 TLEGKLRLGLAERTVVVALAQAMIFHEMSQNGKTPST--TDLGTAESILKTVYSELPSYE 458
Query: 407 KIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
I+PA+L G+ L C PG+P+ PMLAKPTK ++E++++F+ +FTCEYKYDGERA
Sbjct: 459 VIIPAMLEHGILQLRENCRLQPGVPLKPMLAKPTKSITEVLDRFEGKDFTCEYKYDGERA 518
Query: 467 QIHYL------------------EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSF 508
QIH++ + G I+SRN+E + K+PD++ + K +SF
Sbjct: 519 QIHFVAHDADMEMATTAPSAGKSDRGVSNIFSRNSEDLSKKYPDILAKLPTWIKEGTKSF 578
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
VLDCE VA+D ++K+LPFQ L TR ++ VC++AFDILY NG+ L+ + R
Sbjct: 579 VLDCETVAWDMVEKKVLPFQQLMTRKKEGFK-------VCVFAFDILYLNGEALVNKSFR 631
Query: 569 VRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEP 627
RREHL D+F I L+ +V ASCEGL++K +D +++YEP
Sbjct: 632 ERREHLQDAF--------------------IPILLEDSVKASCEGLMVKMLDGPESSYEP 671
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
SKRS NWLK+KKDY+ +GDSLDLV + A+ G+GKRT YGAFLLACY+ N + ++S+C
Sbjct: 672 SKRSQNWLKVKKDYLAGVGDSLDLVVLGAYFGKGKRTSWYGAFLLACYNPNTQNYESVCN 731
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
IGTGFSEA+LE L VI KP+P+Y + PDVWFEP
Sbjct: 732 IGTGFSEAILETLHEQLSEIVIDKPKPFYTHSVGNKDQPDVWFEP 776
>gi|149245640|ref|XP_001527297.1| DNA ligase I, mitochondrial precursor [Lodderomyces elongisporus
NRRL YB-4239]
gi|146449691|gb|EDK43947.1| DNA ligase I, mitochondrial precursor [Lodderomyces elongisporus
NRRL YB-4239]
Length = 786
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 257/558 (46%), Positives = 358/558 (64%), Gaps = 16/558 (2%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVM-----ETTPEDLVPVVYLAANKIAP 244
++P+ L+ +F+ I +E+ R+ IT I+ ++ E LV +VYL N++ P
Sbjct: 166 KIPYSLLTDIFESIEHESSRLKITAIISQFFLEILQQQQQEGDVSKLVKIVYLFINRLGP 225
Query: 245 AHE-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPL 303
+E LELG+G+ +IKA++E GRT + +K+ Y+E+GDLGLVA+ SRS Q M K L
Sbjct: 226 DYEPDLELGLGETLLIKAISECYGRTPTKIKQDYKEVGDLGLVAQKSRSGQPTMFKSADL 285
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT--DCEPQYLIRLLQSKLRIGLAEQ 361
+ VF+ IAK GKDSQ KK I +L A E ++LIR L+ KLRIGLAE+
Sbjct: 286 DVDTVFENLTKIAKSTGKDSQLKKIGIINKMLTACQLKHNEAKFLIRSLEGKLRIGLAEK 345
Query: 362 TLLAALGQAAVYNEQHSKPPPNIQ---SPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
T+L L QA V E N + + L EA +++ F+ +P Y+ ++ G++
Sbjct: 346 TVLVGLAQAFVNFEAWKNNGNNKRIDPAKLVEAEDTMREAFTRIPNYQVLIENAYKYGIF 405
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
NL + TPGIP+ PMLAKPTK +SE++++FQD +FTCEYKYDGERAQ+H DG V I
Sbjct: 406 NLLDHSQLTPGIPLKPMLAKPTKSMSEVLDRFQDEKFTCEYKYDGERAQVHLSSDGQVRI 465
Query: 479 YSRNAERNTGKFPDVVLAVSRLKKPSVR-SFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
YSRN+E + ++PD++ + K S +LDCE VA+DR ++KILPFQ LSTR RK+
Sbjct: 466 YSRNSEDMSQRYPDLISIIKEFSKTQEHTSMILDCEAVAWDRVQKKILPFQVLSTRKRKD 525
Query: 538 VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD 597
V+ DI V +C++AFDILY N L+ + L+ RRE ++ G FQFAT+ S L+
Sbjct: 526 VNEKDITVFICLFAFDILYYNNTSLITKSLKERREIMFKHLTPIEGKFQFATSKDSTSLE 585
Query: 598 EIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAA 656
+Q+FLD +V SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+E +GDSLDLV I A
Sbjct: 586 VLQQFLDQSVKDSCEGLMVKMLEGTESYYEPSKRSRNWLKLKKDYLEGVGDSLDLVVIGA 645
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYY 716
+ GRGKRTG YG FLLA Y+ + + ++ CKIGTGFSE L + L IPK + Y+
Sbjct: 646 YSGRGKRTGTYGGFLLASYNQDTGDLETTCKIGTGFSEEDLAKLYERLHPTEIPKAKEYF 705
Query: 717 RFADTIS---PDVWFEPT 731
+ T S PDVWFEP+
Sbjct: 706 VYDKTNSNAVPDVWFEPS 723
>gi|223995863|ref|XP_002287605.1| ligase [Thalassiosira pseudonana CCMP1335]
gi|220976721|gb|EED95048.1| ligase [Thalassiosira pseudonana CCMP1335]
Length = 633
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/541 (45%), Positives = 350/541 (64%), Gaps = 40/541 (7%)
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA 289
DL P++YLA+N +AP++E +ELG+GD+ ++KA+ EA G +KK+Y++ GDLG VA+
Sbjct: 18 DLYPLLYLASNSVAPSYECVELGVGDSILVKAIGEASGTNPQMIKKKYEKEGDLGTVAQT 77
Query: 290 SRSSQ-SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIR 348
S+ Q +++ P L + +V FR IA +G SQ+ K ++IK LLV A E +Y+IR
Sbjct: 78 SKGKQKTLIGGPKRLDVREVLKVFREIATTSGSQSQKWKVDKIKGLLVRAKGSEAKYIIR 137
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVY----------------------NEQHSKP------ 380
LQ KLRIGLA+ ++LA+L A V +E+ + P
Sbjct: 138 GLQGKLRIGLAQSSVLASLSHAIVLTKPKDVVPLTEERLKEIRSIDADEKGAYPDFARKL 197
Query: 381 -----PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPM 435
P +++ LE + IVK+ +S +P ++ ++ ALL+ + + C+ TPGIP+ PM
Sbjct: 198 CAENLPLDVK--LETSVAIVKKAYSEVPSFDSLLDALLSAPLQEMHKACNLTPGIPVEPM 255
Query: 436 LAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVL 495
LAKPTK V E++ + FTCEYKYDGERAQ+H DG +++SR+ + KFP+V L
Sbjct: 256 LAKPTKSVLEVLKRLNGARFTCEYKYDGERAQVHMTPDGKTKVFSRSLLNTSEKFPEVPL 315
Query: 496 AVSR-LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDI 554
V K+ SV SFVLD E+VA++R Q+ +PFQ LSTR + S D KV V + AFD+
Sbjct: 316 YVQEACKETSVTSFVLDTEVVAFNRVTQQFVPFQVLSTRKKTEESAEDAKVKVIVQAFDL 375
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI---DLDEIQKFLDAAVDASC 611
+Y NG+ LL L RRE + +F PG FQFAT+L D +++FLD AV C
Sbjct: 376 MYLNGESLLDRPLAERRELMRKNFIPVPGKFQFATSLDHTEDGDTAVVEEFLDNAVKGQC 435
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
EGL++KT+D +A YEPS+RSLNWLKLKKDY+E +GDS+DLVP+ A+HGRGKRTGVYGA+L
Sbjct: 436 EGLMVKTLDVNAAYEPSRRSLNWLKLKKDYLEGLGDSVDLVPLGAYHGRGKRTGVYGAYL 495
Query: 672 LACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
LA Y+ + EEFQS+CKIGTGFSE L+E ++SL+ +IP+ Y +D++ DVWF+
Sbjct: 496 LAVYEEDTEEFQSVCKIGTGFSEEDLKELAASLKPHIIPEKSSQYVVSDSLECDVWFDAV 555
Query: 732 E 732
+
Sbjct: 556 Q 556
>gi|189189482|ref|XP_001931080.1| DNA ligase 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972686|gb|EDU40185.1| DNA ligase 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 908
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/583 (43%), Positives = 363/583 (62%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F I T R+ I LR V+ TP+D++P V L NK+A
Sbjct: 246 WKPGEPVPYAALCTTFSKIEMTTKRLEILAHCSLFLRQVLRLTPKDMLPTVMLMVNKLAA 305
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA++E+ GR +K E+GDLGLVA SRS Q M KP LT
Sbjct: 306 DYAGIELGIGESLIMKAVSESTGRNLQQIKTDQNEIGDLGLVAAKSRSKQPTMFKPKALT 365
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD----------------CEPQYLIR 348
+ V IA G+ +Q +K + IK LL AA E ++++R
Sbjct: 366 VEGVRKGLMGIAIVEGQGAQGRKVDGIKKLLSAADAHNSGKAIDIEKDKGGPSEAKFIVR 425
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ KLR+GLAE+T++ A+ QA +++E + + L +A ++K V+S LP YE I
Sbjct: 426 TLEGKLRLGLAEKTVVVAVAQAMIFHEMSLEGKTPSTTDLAKAEAMLKTVYSELPSYEVI 485
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+PA+L G+ NL C PG+P+ PMLAKPTK ++E++++F+ +FTCEYKYDGERAQI
Sbjct: 486 IPAMLEHGIMNLRENCRLQPGVPLKPMLAKPTKSITEVLDRFEGKDFTCEYKYDGERAQI 545
Query: 469 HYL------------------EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
H++ + G I+SRN+E + K+PD++ + K +SFVL
Sbjct: 546 HFVAHDADMELATAAPTAGKSDRGVSNIFSRNSEDLSKKYPDILAKLPTWVKEGTKSFVL 605
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D ++K+LPFQ L TR RK+V + D+KV VC++AFD+LY NG+ L+ + R R
Sbjct: 606 DCETVAWDMVEKKVLPFQQLMTRKRKDVKVEDVKVKVCVFAFDLLYLNGEALVTKSFRER 665
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSK 629
REHL ++F G F A + +L+EIQ L+ +V CEGL++K +D ++ YEPSK
Sbjct: 666 REHLNEAFIPVEGEFALAKFGNTNELEEIQTLLEDSVKEGCEGLMVKMLDGPESFYEPSK 725
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ +GDSLDLV + A++G+GKRT YGAFLLACY+ E+++++C IG
Sbjct: 726 RSQNWLKVKKDYLAGVGDSLDLVVLGAYYGKGKRTSWYGAFLLACYNPKTEKYETVCNIG 785
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
TGFSEA+LE +L VI +P+P+Y + PDVWFEP
Sbjct: 786 TGFSEAILESLHKTLSEIVIDRPKPFYTHSTGNKDQPDVWFEP 828
>gi|301115426|ref|XP_002905442.1| DNA ligase, putative [Phytophthora infestans T30-4]
gi|262110231|gb|EEY68283.1| DNA ligase, putative [Phytophthora infestans T30-4]
Length = 3896
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 256/590 (43%), Positives = 360/590 (61%), Gaps = 54/590 (9%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAAN-KIAPAHEGL 249
P+ L+ +F I TGR++I D++ R V+ +P+DL+ +YL +AP E L
Sbjct: 257 TPYFELAHLFSKIEQVTGRLVIQDLLTAFFRGVIRRSPDDLLACIYLCVCVDLAPPFENL 316
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMR---------KP 300
++GIGDA ++KA+ EA G +K+ Y + GDLG VA+ +RS Q + K
Sbjct: 317 KIGIGDAILMKAIGEATGANLKFIKEMYHKEGDLGKVAQNARSKQKTLSFASLKPATAKG 376
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLV----------AATDCE-PQYLIRL 349
LT+ V+ F IAK G +SQ++K + IK LLV A T E +Y+IR
Sbjct: 377 SGLTVQHVYSQFVKIAKMTGNNSQQQKCSIIKGLLVKCEKEKKDKGAQTAAEGAKYIIRG 436
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIV 409
LQ KLRIGLAE+++L L A + ++++ +EA VK+ F+ P Y+ +V
Sbjct: 437 LQGKLRIGLAEKSILMGLTYAFMTDKEYKDKDKQ-----QEALAFVKKAFAECPSYDALV 491
Query: 410 -------------PALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFT 456
P L +++ C TPG P+ PMLA+PTK + + ++F+ FT
Sbjct: 492 AAFYEVQKEVKSAPFLRVKEFAKVADRCVLTPGTPVSPMLARPTKAYAMVFDRFEGKPFT 551
Query: 457 CEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSV-RSFVLDCEIV 515
CEYKYDGERAQIH L +G + I+SRN E +T +FPDV LA++ K V S ++D E+V
Sbjct: 552 CEYKYDGERAQIHILPNGEIAIFSRNFENSTERFPDVKLAITNAAKEGVVDSCIVDAEVV 611
Query: 516 AYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLY 575
A DR K LPFQ LSTR+RKNV + DIK+ VCIYAFD+L+ NG+ L L RRE L
Sbjct: 612 AVDRATNKRLPFQILSTRSRKNVKVEDIKIPVCIYAFDLLFLNGESFLGVPLARRREKLR 671
Query: 576 DSFEEEPGFFQFATTLTSID--------------LDEIQKFLDAAVDASCEGLIIKTMDR 621
+ F+ +PG F+FAT+L D +D+++ FL+ AV +CEGL++KT+++
Sbjct: 672 EMFDVKPGNFEFATSLDVEDGVDVKDNPEAMEEAVDKVRNFLEEAVRENCEGLMVKTLEK 731
Query: 622 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEE 681
+ATYEP+ RS WLKLKKDY++ IGDS DLVPI AF+GRGKRTGVYGA+LLACYD + E
Sbjct: 732 EATYEPANRSHKWLKLKKDYLDGIGDSADLVPIGAFYGRGKRTGVYGAYLLACYDPDTEM 791
Query: 682 FQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
FQ I K+GTG S+ +L++ + L+ KV+ KP Y + I PDVWFE +
Sbjct: 792 FQPITKLGTGLSDEVLKQFYTQLKEKVVDKPPSDYAIGEGIKPDVWFEAS 841
>gi|399216058|emb|CCF72746.1| unnamed protein product [Babesia microti strain RI]
Length = 787
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/567 (41%), Positives = 364/567 (64%), Gaps = 16/567 (2%)
Query: 193 FIFLSLVFDMI-----SNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE 247
F F++ + D I S R + I+ N R ++ P DL+P VY+ NK++P ++
Sbjct: 159 FKFMAEILDSIEDLHYSGTGSRKFVFTILTNFFRVLIYYKPTDLIPSVYILQNKLSPDYQ 218
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITK 307
++LG+G+A IIKA+++A R+E ++K + Q++ DLGLVA+AS + + + KP LTI +
Sbjct: 219 NIQLGVGEALIIKAMSKAYSRSEKNLKAELQKVEDLGLVAEASTCTFTTLVKPPDLTIMQ 278
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
F FR IA GK+SQ+ K + I +L++ E +Y+IR LQ KLR+G++ T++ L
Sbjct: 279 TFLKFRDIANCHGKNSQQSKLDIIGRILISGKKSESKYIIRFLQQKLRVGVSIPTIIQCL 338
Query: 368 GQA----------AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGV 417
A + + + S + +E +++K ++SV+P E IV LL +
Sbjct: 339 ADAFYLTRPNNDNLISDIRTSNLCLESEDTIESLEQVLKDIYSVVPNVEIIVDKLLKGYL 398
Query: 418 W-NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
L +C TPGIP+ PMLA+P G + +K + +EFTCEYKYDGERAQ+H EDG
Sbjct: 399 GKQLLESCGITPGIPVQPMLARPMGGPQQAFDKMKGVEFTCEYKYDGERAQVHMSEDGVF 458
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
++SRN E T K+PD++ + PSV+SF++D E+VA+DREK KILPFQ L+TR RK
Sbjct: 459 HVFSRNMENATEKYPDLIKIIKSSVDPSVKSFIIDSEVVAFDREKGKILPFQILTTRKRK 518
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+V ++I V++CIY FD+LY NG + ++ L+ RRE LY SF E+ G FA +
Sbjct: 519 DVDENNINVNICIYPFDMLYLNGHSITRKNLKERREFLYSSFREKFGEITFAKYKDIETV 578
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAA 656
+E+Q+FL+ ++ + EGLI KT+ +A+YEPSKRSLNWLK+KKDY+E + DS+DL+PIAA
Sbjct: 579 NELQEFLNESIANNSEGLIAKTLVENASYEPSKRSLNWLKIKKDYVEGMSDSVDLIPIAA 638
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYY 716
F+G GKRT ++G++LLA Y+ E FQ++CK GTGF++ +L+ ++++ ++ YY
Sbjct: 639 FYGSGKRTSIFGSYLLAVYNEEYETFQTVCKTGTGFTDELLKSLHETMKNFIVSNKPVYY 698
Query: 717 RFADTISPDVWFEPTERPETSNSPASI 743
+ +D + PD+WFEP + E S S+
Sbjct: 699 QVSDKMEPDIWFEPKKVWECKVSDFSL 725
>gi|299755490|ref|XP_001828699.2| DNA ligase I [Coprinopsis cinerea okayama7#130]
gi|298411247|gb|EAU93094.2| DNA ligase I [Coprinopsis cinerea okayama7#130]
Length = 803
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 283/728 (38%), Positives = 416/728 (57%), Gaps = 57/728 (7%)
Query: 39 KPKP-----LSSSLNPRRKMSS-SAP----NAFQVLMSAAAKKKPSPQPNSS-SSSSSPK 87
KP P L+ +R +S+ SAP +A +V + A+ PS + S+ + +SPK
Sbjct: 18 KPAPPQQSSLTEMWGKKRDVSTKSAPKKEEDAMEVDLKQEAQAGPSKRKESALETKNSPK 77
Query: 88 KRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKR 147
++ ++ + V Q +A + +P +P+ E P
Sbjct: 78 VKKRRIIESSDEEDEVASRASQSIATSSRHVTPEPSEAASSSPVKKHVEGSRAVKPPHS- 136
Query: 148 KVNVNSVSAKEKIAELKSNIVLLKK--------------------KAGEFDPKMVACWEK 187
++ S++A E A+ + VLL+ K E D K W+
Sbjct: 137 DIDEESIAASEPEADEDRDDVLLEDDEELNPVGGTESKSARAALLKKDEVDIK--GGWKV 194
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPED----LVPVVYLAANKIA 243
G+ VP+ L+ F +I T R+ I+ L V++ + +D L+ VYL N+++
Sbjct: 195 GQPVPYAALAKTFSLIEATTKRLEKNAILTAFLLLVIQRSAKDDHKSLLQAVYLCINRLS 254
Query: 244 PAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPL 303
P + G+ELGIG++ +IKA+AE+ GR+ + +K ++ GDLGLVA S++SQ + KP PL
Sbjct: 255 PDYVGIELGIGESLLIKAIAESTGRSLAVIKADLKKEGDLGLVAMNSKNSQKTLFKPKPL 314
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
T+ VF + IA G SQ KK L A E + + G +
Sbjct: 315 TLPFVFTQLKDIALTTGNASQAKK-----VALRANFALERRAIC--------TGFSRTAA 361
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
+ A + A K + + LEE A+I+K V+S LP Y+ +VPALL G+ L
Sbjct: 362 VLAERERADKKWSQDK----LTARLEEGAEIMKAVYSELPSYDSVVPALLEGGIKGLRER 417
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
C TPGIP+ PMLAKPTK + E++++F++ FTCEYKYDGERAQIH L+DG+V ++SRN+
Sbjct: 418 CKLTPGIPLKPMLAKPTKAIGEVLDRFENKRFTCEYKYDGERAQIHRLDDGTVGVFSRNS 477
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E + K+PD+V +S+ K + +SFVLD E VA DR K++PFQ LS R RK+V + DI
Sbjct: 478 EDMSKKYPDLVDQLSKCIKKNTKSFVLDSEAVAIDRTTGKLMPFQELSRRKRKDVKVEDI 537
Query: 544 KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFL 603
+V VCI+AFD+LY NG+PL+ + L RR+ L F+ PG F FA + DEIQ FL
Sbjct: 538 QVRVCIFAFDLLYLNGEPLINKPLVERRDLLRKHFQVVPGEFDFAKSSDGESTDEIQTFL 597
Query: 604 DAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
+ +V CEGL++K ++ DA+ YEPS+RS+NWLKLKKDY+ +GDSLDLV + A++G+GK
Sbjct: 598 EESVKDGCEGLMVKMLESDASNYEPSRRSVNWLKLKKDYLAGVGDSLDLVVVGAYYGKGK 657
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
RT YGAFLLACYD+++EE+Q+ICKIGTGFS+ L+ +L+ KPR +
Sbjct: 658 RTNYYGAFLLACYDADSEEYQTICKIGTGFSDEALQTHYETLKPLEQTKPRGDIKIGGA- 716
Query: 723 SPDVWFEP 730
PD+WFEP
Sbjct: 717 KPDIWFEP 724
>gi|72390601|ref|XP_845595.1| DNA ligase I [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62358780|gb|AAX79233.1| DNA ligase I, putative [Trypanosoma brucei]
gi|70802130|gb|AAZ12036.1| DNA ligase I, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 699
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/571 (43%), Positives = 356/571 (62%), Gaps = 18/571 (3%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
+ VP+ ++ IS E+ R+ ++ N L V++ P DLVPVVYL NK PAHEG
Sbjct: 71 DTVPYAAVADTLADISAESSRLECIRLLSNFLVAVIQRNPIDLVPVVYLVINKQGPAHEG 130
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELG+GDA ++K +AE CG TE+ K++Y++ GDL VA++ + QS + KP LT V
Sbjct: 131 IELGVGDALLLKVVAECCGITEARAKEEYRQTGDLAEVAQSKKRIQSTLVKPKRLTALAV 190
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F R IA +GKD ++ + IK LL A E ++R LQ K+R+GLAE ++LAA+G
Sbjct: 191 FQALREIALMSGKDVARRRGDVIKRLLRDAVGPEVNLIVRALQQKMRVGLAETSVLAAVG 250
Query: 369 QA-AVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL--- 420
A A+ N +K P +Q L A + + ++ +P + ++ A+L G+ +
Sbjct: 251 YAFAMSNIGVAKIPSLTPEQLQRELNVGAANLTRTYNEVPCLDVVLAAVLQHGLEVIVPT 310
Query: 421 -------SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
+ S PGIP+ P LA PT GVS I+++F FT EYKYDGERAQIHY
Sbjct: 311 SAEANMHARALSVRPGIPVKPQLAHPTSGVSVILDRFNGKAFTSEYKYDGERAQIHYTRS 370
Query: 474 GSVEIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLST 532
V+I+SRN+E NT K+PD++ + +V SF++D E+VA D+ + FQ L
Sbjct: 371 SGVQIFSRNSETNTSKYPDIISMLPEAFSVDTVDSFIIDAEVVAVDKVTGALQAFQVLQH 430
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
R RKNVS ++KV VC++AFDILY NG+P + + L RRE L+ F+ F+FA L
Sbjct: 431 RGRKNVSFDNVKVPVCVFAFDILYFNGEPQMSKTLSQRREVLHTHFKPVSTKFRFAEYLD 490
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
S D+D+IQ FLD A+ EGL++KT++ ++TY P+KRS WLKLKKDY++ + D+LDLV
Sbjct: 491 SNDVDDIQAFLDRAIRDGTEGLMVKTLEEESTYVPAKRSHYWLKLKKDYMDGVTDTLDLV 550
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKP 712
PI A++G+GKRTGV+G FLLACYD +E+QSICKIGTGF + LE + SL+ ++ +
Sbjct: 551 PIGAYYGKGKRTGVFGGFLLACYDGEGDEYQSICKIGTGFQDDQLEAITKSLQPSILDEQ 610
Query: 713 RPYYRFADTISPDVWFEPTERPETSNSPASI 743
YYR D PDVWF+ ++ E + SI
Sbjct: 611 PRYYRTED--KPDVWFQASQVWEVKAADLSI 639
>gi|154342041|ref|XP_001566972.1| putative DNA ligase I [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134064297|emb|CAM40497.1| putative DNA ligase I [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 776
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/572 (43%), Positives = 355/572 (62%), Gaps = 19/572 (3%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
E VPF + V IS R+ + +L V+E PEDLVPV+YL NK AP HEG
Sbjct: 136 EPVPFAVVVDVLADISATGSRLECLKQLTFLLLAVIERCPEDLVPVMYLVINKHAPQHEG 195
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELGIGDA ++KA+AE CG TES K++Y++ GDL +A+ + QS + KP L+ V
Sbjct: 196 VELGIGDAVLVKAVAECCGMTESRAKEEYRQSGDLAEIAQMHKQKQSTLMKPKALSARSV 255
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F ++R IA +GKD ++ + IK LL A E ++R LQ K+RIGLAE + LAA+G
Sbjct: 256 FKSYREIAMMSGKDVVRRRSDLIKGLLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVG 315
Query: 369 QAAVYN-----EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLS-N 422
A + + H+ +Q+ L A + ++F +P + ++ A+L G L
Sbjct: 316 YAFALHFVGSAQMHTMSEVQLQTLLNSGADSLARIFYEVPSLDVVLSAVLASGFMILVPG 375
Query: 423 TC---------SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
+C S PG+P+ P LA PT G++ I+++ Q +FT EYKYDGERAQIHY ED
Sbjct: 376 SCIAKVHAKELSIRPGLPVKPQLAHPTSGITVILDRLQGKKFTSEYKYDGERAQIHYSED 435
Query: 474 GSVEIYSRNAERNTGKFPDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLST 532
I+SRN+E +TGK+PDV+ + + V+SF++D E+VA E + FQ L
Sbjct: 436 NGFHIFSRNSETHTGKYPDVIAILPNTFDAAEVQSFIIDAEVVAVHPETGALQAFQVLQH 495
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
R RKN++ D+ + VC++ FD+LY NG+P L + L+ RRE L+ P FA L
Sbjct: 496 RGRKNIAEKDVSISVCLFVFDLLYLNGEPQLNKTLQQRRELLWRYIRPLPAKLCFAAYLD 555
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
S D++++QKFL+ ++ CEGL++KT++ +ATY P+KRS WLKLKKDY++ + D+LDLV
Sbjct: 556 SDDVEDVQKFLEKSIADGCEGLMVKTLEEEATYTPAKRSHYWLKLKKDYMDGVTDTLDLV 615
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI-PK 711
PIAAF+G+GKRTGV+G FLLACYD +E+QSICKIGTGF + LE+ + SL+ V+ K
Sbjct: 616 PIAAFYGKGKRTGVFGGFLLACYDPKADEYQSICKIGTGFQDEELEKLTQSLKPFVVHDK 675
Query: 712 PRPYYRFADTISPDVWFEPTERPETSNSPASI 743
PR YYR A PDVW + E + S+
Sbjct: 676 PR-YYR-AGGEEPDVWLTEAQVWEVKAADLSV 705
>gi|330934475|ref|XP_003304562.1| hypothetical protein PTT_17200 [Pyrenophora teres f. teres 0-1]
gi|311318741|gb|EFQ87336.1| hypothetical protein PTT_17200 [Pyrenophora teres f. teres 0-1]
Length = 909
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/583 (43%), Positives = 362/583 (62%), Gaps = 37/583 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F I T R+ I LR V+ TP+D++P V L NK+A
Sbjct: 247 WKPGEPVPYAALCTTFSKIEMTTKRLEILAHCSLFLRQVLRLTPKDMLPTVMLMVNKLAA 306
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA++E+ GR +K E+GDLGLVA SRS Q M KP LT
Sbjct: 307 DYAGIELGIGESLIMKAVSESTGRNLQQIKTDQNEIGDLGLVAAKSRSKQPTMFKPKALT 366
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD----------------CEPQYLIR 348
+ V IA G+ +Q +K + IK LL AA E ++++R
Sbjct: 367 VEGVRKGLMGIATVEGQGAQGRKVDGIKKLLSAADAHNSGKAIDIDKDKGGPSEAKFIVR 426
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ KLR+GLAE+T++ A+ QA +++E + + L +A ++K V+S LP YE I
Sbjct: 427 TLEGKLRLGLAEKTVVVAVAQAMIFHEMSLEGKTPSTTDLGKAEAMLKTVYSELPSYEVI 486
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+PA+L G+ NL C PG+P+ PMLAKPTK ++E++++F+ +FTCEYKYDGERAQI
Sbjct: 487 IPAMLEHGIMNLRENCRLQPGVPLKPMLAKPTKSITEVLDRFEGKDFTCEYKYDGERAQI 546
Query: 469 HYL------------------EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
H++ + G I+SRN+E + K+PD++ + K +SFVL
Sbjct: 547 HFVAHDADMELATAAPTAGRSDRGVSNIFSRNSEDLSKKYPDILAKLPTWVKEGTKSFVL 606
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE VA+D ++K+LPFQ L TR RK+V + D+KV VC++AFD+LY NG+ L+ + R R
Sbjct: 607 DCETVAWDMVEKKVLPFQQLMTRKRKDVKVEDVKVKVCVFAFDLLYLNGEALVTKSFRER 666
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSK 629
REHL ++F G F A + +L+EIQ L+ +V CEGL++K +D ++ YEPSK
Sbjct: 667 REHLNEAFIPVEGEFALAKFGNTNELEEIQTLLEDSVKEGCEGLMVKMLDGPESFYEPSK 726
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
RS NWLK+KKDY+ +GDSLDLV + A++G+GKRT YGAFLLACY+ E+++++C IG
Sbjct: 727 RSQNWLKVKKDYLAGVGDSLDLVVLGAYYGKGKRTSWYGAFLLACYNPKTEKYETVCNIG 786
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
TGFSE +LE +L VI +P+P+Y + PDVWFEP
Sbjct: 787 TGFSEVILESLHKTLSEIVIDRPKPFYTHSTGNKDQPDVWFEP 829
>gi|261329005|emb|CBH11983.1| DNA ligase I, putative [Trypanosoma brucei gambiense DAL972]
Length = 746
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/571 (43%), Positives = 356/571 (62%), Gaps = 18/571 (3%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
+ VP+ ++ IS E+ R+ ++ N L V++ P DLVPVVYL NK PAHEG
Sbjct: 118 DTVPYAAVADTLADISAESSRLECIRLLSNFLVAVIQRNPIDLVPVVYLVINKQGPAHEG 177
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELG+GDA ++K +AE CG TE+ K++Y++ GDL VA++ + QS + KP LT V
Sbjct: 178 IELGVGDALLLKVVAECCGITEARAKEEYRQTGDLAEVAQSKKRIQSTLVKPKRLTALAV 237
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F R IA +GKD ++ + IK LL A E ++R LQ K+R+GLAE ++LAA+G
Sbjct: 238 FQALREIALMSGKDVARRRGDVIKRLLRDAVGPEVNLIVRALQQKMRVGLAETSVLAAVG 297
Query: 369 QA-AVYNEQHSK----PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL--- 420
A A+ N +K P +Q L A + + ++ +P + ++ A+L G+ +
Sbjct: 298 YAFAMSNIGVAKIPSLTPEQLQRELNVGAANLTRTYNEVPCLDVVLAAVLQHGLEVIVPT 357
Query: 421 -------SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
+ S PGIP+ P LA PT GVS I+++F FT EYKYDGERAQIHY
Sbjct: 358 SAEANMHARALSVRPGIPVKPQLAHPTSGVSVILDRFNGKAFTSEYKYDGERAQIHYTRG 417
Query: 474 GSVEIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLST 532
V+I+SRN+E NT K+PD++ + +V SF++D E+VA D+ + FQ L
Sbjct: 418 SGVQIFSRNSETNTSKYPDIISMLPEAFSVDTVDSFIIDAEVVAVDKVTGALQAFQVLQH 477
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
R RKNVS ++KV VC++AFDILY NG+P + + L RRE L+ F+ F+FA L
Sbjct: 478 RGRKNVSFDNVKVPVCVFAFDILYFNGEPQMSKTLSQRREVLHTHFKPVSTKFRFAEYLD 537
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
S D+D+IQ FLD A+ EGL++KT++ ++TY P+KRS WLKLKKDY++ + D+LDLV
Sbjct: 538 SNDVDDIQAFLDRAIRDGTEGLMVKTLEEESTYVPAKRSHYWLKLKKDYMDGVTDTLDLV 597
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKP 712
PI A++G+GKRTGV+G FLLACYD +E+QSICKIGTGF + LE + SL+ ++ +
Sbjct: 598 PIGAYYGKGKRTGVFGGFLLACYDGEGDEYQSICKIGTGFQDDQLEAITKSLQPSILDEQ 657
Query: 713 RPYYRFADTISPDVWFEPTERPETSNSPASI 743
YYR D PDVWF+ ++ E + SI
Sbjct: 658 PRYYRTED--KPDVWFQASQVWEVKAADLSI 686
>gi|367001580|ref|XP_003685525.1| hypothetical protein TPHA_0D04570 [Tetrapisispora phaffii CBS 4417]
gi|357523823|emb|CCE63091.1| hypothetical protein TPHA_0D04570 [Tetrapisispora phaffii CBS 4417]
Length = 736
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/554 (44%), Positives = 360/554 (64%), Gaps = 23/554 (4%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE-GLELGIGDAS 257
+F I + R+ I + V++ P D++ V YL N++ P +E GLELG+G+
Sbjct: 117 LFQQIEETSSRLAIIKLCSEFFIRVIKNNPSDIIIVAYLFINRLGPDYEPGLELGLGENL 176
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAK 317
+IK ++EA G++ +K + +E GDLG +A+ +R+ Q M KP PLTI+ VF+ + IA
Sbjct: 177 LIKTISEAYGKSIKQIKLELKETGDLGTIARDARNIQPTMFKPKPLTISDVFNNLKKIAS 236
Query: 318 EAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH 377
GKDSQ +K IK +L A+ E ++LIR L+SKLRIGLAE+T+L +L +A + +E
Sbjct: 237 ATGKDSQLRKIKLIKQMLSASKGLEAKFLIRSLESKLRIGLAEKTVLISLSKALLLHEHW 296
Query: 378 SKP------PPNIQSP--LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
+ +++S +E+A +++ +P YE ++ L DG+ N+ TC+ PG
Sbjct: 297 KEKGESKFDEEDVESMDLIEQAEAKLREAHCQVPNYEIVINLCLQDGILNIDKTCTLRPG 356
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PMLAKPTK ++E++N FQ EF EYKYDGERAQ+H LE G + IYSRN E T +
Sbjct: 357 IPLKPMLAKPTKAITEVLNAFQGKEFISEYKYDGERAQVHLLEGGEMRIYSRNGENMTER 416
Query: 490 FPD--------VVLAVSRLKKPS-----VRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
+P+ VV A++ ++ V+ +LDCE+VA+D E++KILPFQ L+TR RK
Sbjct: 417 YPELDVKDFLCVVKAITNDQEGENAIQPVKDIILDCEVVAWDVEQKKILPFQVLTTRKRK 476
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
NV L D+KV VC++AFD+LY N + ++ + LR R+E L PG FQ+AT+L + D+
Sbjct: 477 NVDLKDVKVRVCLFAFDLLYLNNEGMINKSLRERQEILRKVTVLVPGEFQYATSLITSDM 536
Query: 597 DEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
DE+Q FLD AV SCEGL++K +D ++ YEPSKRS NWLKLKKDY++ +GDSLDLV +
Sbjct: 537 DELQTFLDQAVKNSCEGLMVKMLDGEESHYEPSKRSRNWLKLKKDYLDGVGDSLDLVVMG 596
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
A+ G+GKRTG YG FLL CY+ + +EF++ CKIGTGFS+ ML + L+ I P
Sbjct: 597 AYFGKGKRTGSYGGFLLGCYNEDTQEFETCCKIGTGFSDEMLGNLHTLLQPTEIDNPPMT 656
Query: 716 YRFADTISPDVWFE 729
Y + + PDVWF+
Sbjct: 657 YIYDSSAEPDVWFQ 670
>gi|294892161|ref|XP_002773925.1| dna ligase i, putative [Perkinsus marinus ATCC 50983]
gi|239879129|gb|EER05741.1| dna ligase i, putative [Perkinsus marinus ATCC 50983]
Length = 784
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/592 (42%), Positives = 366/592 (61%), Gaps = 40/592 (6%)
Query: 188 GERVPFIFLSLVFDMI-----SNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKI 242
G+ +P+ L+L I S + + + I+ N+ R ++ P +L+ VYL NK+
Sbjct: 139 GKNLPYSLLALALQKIEDLKNSGQGSKKKVLVILANLFRIIIYYNPSELIYAVYLLINKL 198
Query: 243 APAHEGLELGIGDASIIKALAEACGRTESHVKKQYQE--MGDLGLVAKASRSSQSMMRKP 300
P +E +E+G+GD I+KA+A+ GR+E H+ DLG A SR +Q M+ P
Sbjct: 199 RPDYENVEVGVGDHVILKAMAQVYGRSEKHITADISNGNAADLGEAALLSRVNQPMLFAP 258
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
PLT++K++ ++++ GKDSQ +K+ I LVAA E +Y++R LQ +LR+G+
Sbjct: 259 PPLTLSKLYKELLVMSQARGKDSQRLRKDIITKCLVAAKGEEAKYIVRTLQGRLRVGILS 318
Query: 361 QTLLAALGQAAVYNE--------------QHSKPPPNIQS------PLEEAAKIVKQVFS 400
T+L AL + V E + KP P + LE A KQ F
Sbjct: 319 ATILQALAYSFVLTEPAQGNADKECVPDIRKEKPSPTSEKITLKMIALEAA---TKQAFC 375
Query: 401 VLPVYEKIVPALLTDGV-WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
+P Y+K+V LL+ LS C+ TPGIP+ PMLAKPTK ++E++++F+D++FT EY
Sbjct: 376 EVPSYDKLVECLLSGANPEELSKACTVTPGIPVKPMLAKPTKSITEVLDRFKDIKFTAEY 435
Query: 460 KYDGERAQIHYL--EDGSVEI--YSRNAERNTGKFPDVVLAV----SRLKKPSVRSFVLD 511
KYDGERAQ+H E G EI YSRN+E T K+PDV+ A+ + L KP + S ++D
Sbjct: 436 KYDGERAQVHLWTTEKGKTEIRVYSRNSEDLTEKYPDVIDAIQEMMNTLDKP-MESMIID 494
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
CE VA+DREK K+LPFQ LS+R RKNV +S+IKV VC++ FD++Y + + ++ + L RR
Sbjct: 495 CEAVAFDREKHKVLPFQLLSSRPRKNVVMSEIKVQVCLFPFDLIYLDAESMITQNLDTRR 554
Query: 572 EHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRS 631
+ L +E P FAT +EIQ F +VDASCEGL++KT+ +ATYEPS+RS
Sbjct: 555 KTLRTRLKEIPDRIHFATARDMDSEEEIQAFFTESVDASCEGLMLKTLVENATYEPSRRS 614
Query: 632 LNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTG 691
LNWLKLKKDY+ + DSLDLVPI AF+G+GKRTGVYG +LLA YD+N+ E+QS CK+ TG
Sbjct: 615 LNWLKLKKDYLSGMADSLDLVPIGAFYGKGKRTGVYGTYLLAVYDANDGEYQSCCKVATG 674
Query: 692 FSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
F++ L++ + VIP+ R Y ++ ++PD+W + T+ E + SI
Sbjct: 675 FTDEFLDKHYDYHKDNVIPRRRADYVVSEKMTPDIWLDGTQVWEIQCADLSI 726
>gi|407416584|gb|EKF37703.1| DNA ligase I, putative [Trypanosoma cruzi marinkellei]
Length = 712
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 243/572 (42%), Positives = 354/572 (61%), Gaps = 20/572 (3%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
E VP+ ++ IS E+ R+ + N+ V++ +P DLV V+YL NK PAHEG
Sbjct: 70 EIVPYAAVADTLADISAESSRLECIKCLTNLFLAVIQRSPSDLVSVIYLVINKQGPAHEG 129
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELG+GDA ++K +AE CG TE+++K Y++ GDL VA+ + QS + KP L+ V
Sbjct: 130 IELGVGDALLVKVIAECCGVTEAYIKDAYRQTGDLAEVAQDKKRQQSTLVKPKRLSAADV 189
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F R IA +GK++ ++ + +K LL A E ++R LQ K+R+GLAE + LAA+G
Sbjct: 190 FKALRDIALMSGKEAARRRADVMKRLLRDAVGPEVNLIVRALQQKMRVGLAESSALAAIG 249
Query: 369 QAAVYNEQHSK-----PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL--- 420
A N K P +Q L + +++ +P +E +V A+L G +N+
Sbjct: 250 YAFALNHIGLKEVVKFTPEQLQRELNIGSDNFARIYHEVPSFEIVVGAMLQHG-FNVIVP 308
Query: 421 --------SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLE 472
+ S PGIP+ P LA PT G++ I+ +FQ FT EYKYDGERAQIHY +
Sbjct: 309 SSPEGRAHAAELSIRPGIPVKPQLAHPTSGINAILERFQGKAFTSEYKYDGERAQIHYSK 368
Query: 473 DGSVEIYSRNAERNTGKFPDVVLAVSRL-KKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
+ +I+SRNAE +TGK+PD++ + R+ +V SF++D E+VA ++E + FQ L
Sbjct: 369 EKGYQIFSRNAETHTGKYPDIIAMLPRVFSTETVDSFIIDSEVVAVNKETGALQAFQVLQ 428
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
R RKNVS + + VC++AFDILY NG P + + L RR+ LY F FQFA L
Sbjct: 429 HRGRKNVSFESVTIPVCVFAFDILYFNGSPQMAKPLLERRQILYSYFTPIHAAFQFAEHL 488
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
D++EIQ FLD ++ CEGL++KT+ +A Y P+KRS +WLKLKKDY++ + D+LDL
Sbjct: 489 DGTDVEEIQSFLDRSIKDGCEGLMVKTLKEEAAYTPAKRSHHWLKLKKDYMDGVTDTLDL 548
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
VPI A++G+GKRTGV+G FLLACY+S+++EFQSICKIG+GF + LE + +L+S V+ +
Sbjct: 549 VPIGAYYGKGKRTGVFGGFLLACYNSDSDEFQSICKIGSGFQDEQLESLTQTLQSCVLME 608
Query: 712 PRPYYRFADTISPDVWFEPTERPETSNSPASI 743
YYR + PDVW E + E + SI
Sbjct: 609 QPRYYRAEE--KPDVWLEASNVWEVKAADLSI 638
>gi|407851837|gb|EKG05546.1| DNA ligase I, putative [Trypanosoma cruzi]
Length = 701
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/590 (41%), Positives = 364/590 (61%), Gaps = 25/590 (4%)
Query: 177 FDPKM--VACWEK-----GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE 229
FDP + + W + E VP+ ++ IS E+ R+ + N+ V++ +P
Sbjct: 51 FDPYVNYESVWHRPLPGVREIVPYAVVADTLADISAESSRLECIKCLTNLFLAVIQRSPS 110
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA 289
DLV V+YL NK PAHEG+ELG+GDA ++K +AE CG TE+++K Y++ GDL VA+
Sbjct: 111 DLVSVIYLVINKQGPAHEGIELGVGDALLVKVIAECCGVTEAYIKDTYRQTGDLAEVAQN 170
Query: 290 SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRL 349
+ QS + KP L+ VF R IA +GK++ ++ + +K LL A E ++R
Sbjct: 171 KKRQQSTLVKPKRLSAADVFKALRDIALMSGKETSRRRADVMKRLLRDAVGPEVNLIVRA 230
Query: 350 LQSKLRIGLAEQTLLAALGQA-AVYN----EQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
LQ K+R+GLAE + LAA+G A A+++ E P +Q L ++ +++ +P
Sbjct: 231 LQQKMRVGLAESSALAAIGYAFALHHIGLTEFVKFTPEQLQRELNIGSENFARIYHEVPS 290
Query: 405 YEKIVPALLTDGVWNL----------SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDME 454
+E +V A+L G+ + + S PGIP+ P LA PT G++ I+ +FQ
Sbjct: 291 FEIVVGAMLKHGLNVIVPSSPEGRAHAAELSIRPGIPVKPQLAHPTSGINAILERFQGKA 350
Query: 455 FTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRL-KKPSVRSFVLDCE 513
FT EYKYDGERAQIHY ++ +I+SRNAE +TGK+PD++ + R+ +V SF++D E
Sbjct: 351 FTSEYKYDGERAQIHYSKEKGYQIFSRNAETHTGKYPDIIAMLPRVFSTEAVESFIIDSE 410
Query: 514 IVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREH 573
+VA ++E + FQ L R RKNVS + + VC++AFDILY NG P + + L RR+
Sbjct: 411 VVAVNKETGALQAFQVLQHRGRKNVSFESVTIPVCVFAFDILYFNGSPQMTKPLLERRQV 470
Query: 574 LYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLN 633
LY F FQFA L D++EIQ FLD ++ CEGL++KT+ +ATY P+KRS
Sbjct: 471 LYSYFTPIHAAFQFAEHLDGTDVEEIQSFLDRSIKDGCEGLMVKTLKEEATYTPAKRSYC 530
Query: 634 WLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFS 693
WLKLKKDY++ + D+LDLVPI A++G+GKRTGV+G FLLACY+S+++EFQSICKIG+GF
Sbjct: 531 WLKLKKDYMDGVTDTLDLVPIGAYYGKGKRTGVFGGFLLACYNSDSDEFQSICKIGSGFL 590
Query: 694 EAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ LE + +L+S V+ + YYR + PDVW E + E + SI
Sbjct: 591 DEQLESLTQALQSCVLMEQPRYYRAEE--KPDVWLEASNVWEVKAADLSI 638
>gi|146094184|ref|XP_001467203.1| putative DNA ligase I [Leishmania infantum JPCM5]
gi|134071567|emb|CAM70256.1| putative DNA ligase I [Leishmania infantum JPCM5]
Length = 667
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/572 (43%), Positives = 353/572 (61%), Gaps = 19/572 (3%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
E VPF + V IS R+ + +L V+E PEDLVPV+YL NK AP HEG
Sbjct: 36 EPVPFAAVVDVLADISATGSRLECLKQLTFLLLAVIERCPEDLVPVMYLVINKHAPQHEG 95
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELGIGDA ++KA+AE CG TE+ K+ Y++ GDL +A+ + QS + KP PL+ V
Sbjct: 96 VELGIGDAVLVKAVAECCGMTEARAKEAYRQSGDLAEIAQMHKQKQSTLMKPKPLSARSV 155
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F T++ IA +G+D ++ + IK LL A E ++R LQ K+RIGLAE + LAA+G
Sbjct: 156 FKTYKEIAMMSGRDVMRRRSDLIKGLLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVG 215
Query: 369 QAAVYN-----EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL--- 420
A + + H +Q+ L A + ++F +P + ++ A+L +G L
Sbjct: 216 YAFALHFLGGAQMHKMDEVQLQTLLNTGADSLARIFYEVPSLDVVLSAVLANGFMTLVPG 275
Query: 421 -------SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
+ S PG+P+ P LA PT ++ I+++ Q +FT EYKYDGERAQIHY +D
Sbjct: 276 SSIAKRYAKDLSIRPGLPVKPQLAYPTSSITVILDRLQGKKFTSEYKYDGERAQIHYDKD 335
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKP-SVRSFVLDCEIVAYDREKQKILPFQTLST 532
I+SRN+E +TGK+PDV+ + ++ P V+SF+LD E+VA E + FQ L
Sbjct: 336 KGFHIFSRNSETHTGKYPDVISMLPKVFDPVEVQSFILDSEVVAVHPETGALQAFQVLQH 395
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
R RKN++ D+ + VC++ FDILY NG+P L + L+ RRE L+ P FAT L
Sbjct: 396 RGRKNIAEEDVSIPVCVFVFDILYFNGEPQLNKTLQQRRELLWRCIHPLPAKLSFATYLD 455
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
S ++++Q FL+ ++ CEGL++KT+D +A Y P+KRS WLKLKKDY++ + D+LDLV
Sbjct: 456 SDKVEDMQTFLERSIADGCEGLMVKTLDEEANYTPAKRSHYWLKLKKDYMDGVTDTLDLV 515
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI-PK 711
PIAAFHG+GKRTGV+G FLLACYD +E+QSICKIGTGF + LE+ + SL+ V+ K
Sbjct: 516 PIAAFHGKGKRTGVFGGFLLACYDPKADEYQSICKIGTGFQDEELEKLTQSLKPFVVDDK 575
Query: 712 PRPYYRFADTISPDVWFEPTERPETSNSPASI 743
PR YYR A PDVW + E + S+
Sbjct: 576 PR-YYR-AGGEEPDVWLTEAQVWEVKAADLSV 605
>gi|71649673|ref|XP_813552.1| DNA ligase I [Trypanosoma cruzi strain CL Brener]
gi|70878445|gb|EAN91701.1| DNA ligase I, putative [Trypanosoma cruzi]
Length = 701
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/572 (42%), Positives = 356/572 (62%), Gaps = 20/572 (3%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
E VP+ ++ IS E+ R+ + N+ V++ +P DLV V+YL NK PAHEG
Sbjct: 70 EIVPYAAVADTLADISAESSRLECIKCLTNLFLAVIQRSPSDLVSVIYLVINKQGPAHEG 129
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELG+GDA ++K +AE CG TE+++K Y++ GDL VA+ + QS + KP L+ V
Sbjct: 130 IELGVGDALLVKVIAECCGVTEAYIKDAYRQTGDLAEVAQDKKRQQSTLVKPKRLSAADV 189
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F R IA +GK++ ++ + +K LL A E ++R LQ K+R+GLAE + LAA+G
Sbjct: 190 FKALRDIALMSGKEASRRRADVMKRLLRDAVGPEVNLIVRALQQKMRVGLAESSALAAIG 249
Query: 369 QA-AVYN----EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL--- 420
A A+++ E P +Q L + +++ +P +E +V A+L G +N+
Sbjct: 250 YAFALHHIGLTEVVKFTPEQLQRELNIGSDNFARIYHEVPSFEIVVGAMLKHG-FNVIVP 308
Query: 421 --------SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLE 472
+ S PGIP+ P LA PT G++ I+ +FQ FT EYKYDGERAQIHY +
Sbjct: 309 SSPEGRAHAAELSIRPGIPVKPQLAHPTSGINAILERFQGKAFTSEYKYDGERAQIHYSK 368
Query: 473 DGSVEIYSRNAERNTGKFPDVVLAVSRL-KKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
+ +I+SRNAE +TGK+PD++ + R+ +V SF++D E+VA ++E + FQ L
Sbjct: 369 EKGYQIFSRNAETHTGKYPDIIAMLPRVFSTEAVESFIIDSEVVAVNKETGALQAFQVLQ 428
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
R RKNVS + + VC++AFDILY NG P + + L RR+ LY F FQFA L
Sbjct: 429 HRGRKNVSFESVTIPVCVFAFDILYFNGSPQMTKPLLERRQVLYSYFTPIHAAFQFAEHL 488
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
D++EIQ FLD ++ CEGL++KT+ +A Y P+KRS WLKLKKDY++ + D+LDL
Sbjct: 489 DGTDVEEIQSFLDRSIKDGCEGLMVKTLKEEAAYTPAKRSYCWLKLKKDYMDGVTDTLDL 548
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
VPI A++G+GKRTGV+G FLLACY+S+++EFQSICKIG+GF + LE + +L+S V+ +
Sbjct: 549 VPIGAYYGKGKRTGVFGGFLLACYNSDSDEFQSICKIGSGFLDEQLESLTQALQSFVLKE 608
Query: 712 PRPYYRFADTISPDVWFEPTERPETSNSPASI 743
YYR + PDVW E + E + SI
Sbjct: 609 QPRYYRAEE--KPDVWLEASNVWEVKAADLSI 638
>gi|71663975|ref|XP_818973.1| DNA ligase I [Trypanosoma cruzi strain CL Brener]
gi|70884254|gb|EAN97122.1| DNA ligase I, putative [Trypanosoma cruzi]
Length = 699
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/572 (42%), Positives = 356/572 (62%), Gaps = 20/572 (3%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
E VP+ ++ IS E+ R+ + N+ V++ +P DLV V+YL NK PAHEG
Sbjct: 70 EIVPYAAVADTLADISAESSRLECIKCLTNLFLAVIQRSPSDLVSVIYLVINKQGPAHEG 129
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELG+GDA ++K +AE CG TE+++K Y++ GDL VA+ + QS + KP L+ V
Sbjct: 130 IELGVGDALLVKVIAECCGVTEAYIKDAYRQTGDLAEVAQNKKRQQSTLVKPKRLSAADV 189
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F R IA +GK++ ++ + +K LL A E ++R LQ K+R+GLAE + LAA+G
Sbjct: 190 FKALRDIALMSGKEASRRRADVMKRLLRDAVGPEVNLIVRALQQKMRVGLAESSALAAIG 249
Query: 369 QA-AVYN----EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL--- 420
A A+++ E P +Q L + +++ +P +E +V A+L G +N+
Sbjct: 250 YAFALHHIGLTEVVKFTPEQLQRELNIGSDNFARIYHEVPSFEIVVGAMLKHG-FNVIVP 308
Query: 421 --------SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLE 472
+ S PGIP+ P LA PT G++ I+ +FQ FT EYKYDGERAQIHY +
Sbjct: 309 SSPEGRAHAAELSIRPGIPVKPQLAHPTSGINAILERFQGKAFTSEYKYDGERAQIHYSK 368
Query: 473 DGSVEIYSRNAERNTGKFPDVVLAVSRL-KKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
+ +I+SRNAE +TGK+PD++ + R+ +V SF++D E+VA ++E + FQ L
Sbjct: 369 EKGYQIFSRNAETHTGKYPDIIAMLPRVFSTEAVESFIIDSEVVAVNKETGALQAFQVLQ 428
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
R RKNVS + + VC++AFDILY NG P + + L RR+ LY F FQFA L
Sbjct: 429 HRGRKNVSFESVTIPVCVFAFDILYFNGSPQMTKPLLERRQVLYSYFTPIHAAFQFAEHL 488
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
D++EIQ FLD ++ CEGL++KT+ +A Y P+KRS WLKLKKDY++ + D+LDL
Sbjct: 489 DGTDVEEIQSFLDRSIKDGCEGLMVKTLKEEAAYTPAKRSYCWLKLKKDYMDGVTDTLDL 548
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
VPI A++G+GKRTGV+G FLLACY+S+++EFQSICKIG+GF + LE + +L+S V+ +
Sbjct: 549 VPIGAYYGKGKRTGVFGGFLLACYNSDSDEFQSICKIGSGFLDEQLESLTQALQSCVLME 608
Query: 712 PRPYYRFADTISPDVWFEPTERPETSNSPASI 743
YYR + PDVW E + E + SI
Sbjct: 609 QPRYYRAEE--KPDVWLEASNVWEVKAADLSI 638
>gi|398019792|ref|XP_003863060.1| DNA ligase I, putative [Leishmania donovani]
gi|322501291|emb|CBZ36370.1| DNA ligase I, putative [Leishmania donovani]
Length = 667
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/572 (43%), Positives = 352/572 (61%), Gaps = 19/572 (3%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
E VPF + V IS R+ + +L V+E PEDLVPV+YL NK AP HEG
Sbjct: 36 EPVPFAAVVDVLADISATGSRLECLKQLTFLLLAVIERCPEDLVPVMYLVINKHAPQHEG 95
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELGIGDA ++KA+AE C TE+ K+ Y++ GDL +A+ + QS + KP PL+ V
Sbjct: 96 VELGIGDAVLVKAVAECCSMTEARAKEAYRQSGDLAEIAQMHKQKQSTLMKPKPLSARSV 155
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F T++ IA +G+D ++ + IK LL A E ++R LQ K+RIGLAE + LAA+G
Sbjct: 156 FKTYKEIAMMSGRDVMRRRSDLIKGLLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVG 215
Query: 369 QAAVYN-----EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL--- 420
A + + H +Q+ L A + ++F +P + ++ A+L +G L
Sbjct: 216 YAFALHFLGGAQMHKMDEVQLQTLLNTGADSLARIFYEVPSLDVVLSAVLANGFMTLVPG 275
Query: 421 -------SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
+ S PG+P+ P LA PT ++ I+++ Q +FT EYKYDGERAQIHY +D
Sbjct: 276 SSIAKRYAKDLSIRPGLPVKPQLAYPTSSITVILDRLQGKKFTSEYKYDGERAQIHYDKD 335
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKP-SVRSFVLDCEIVAYDREKQKILPFQTLST 532
I+SRN+E +TGK+PDV+ + ++ P V+SF+LD E+VA E + FQ L
Sbjct: 336 KGFHIFSRNSETHTGKYPDVISMLPKVFDPVEVQSFILDSEVVAVHPETGALQAFQVLQH 395
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
R RKN++ D+ + VC++ FDILY NG+P L + L+ RRE L+ P FAT L
Sbjct: 396 RGRKNIAEEDVSIPVCVFVFDILYFNGEPQLNKTLQQRRELLWRCIHPLPAKLSFATYLD 455
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
S +++IQ FL+ ++ CEGL++KT+D +A Y P+KRS WLKLKKDY++ + D+LDLV
Sbjct: 456 SDKVEDIQTFLERSIADGCEGLMVKTLDEEANYTPAKRSHYWLKLKKDYMDGVTDTLDLV 515
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI-PK 711
PIAAFHG+GKRTGV+G FLLACYD +E+QSICKIGTGF + LE+ + SL+ V+ K
Sbjct: 516 PIAAFHGKGKRTGVFGGFLLACYDPKADEYQSICKIGTGFQDEELEKLTQSLKPFVVDDK 575
Query: 712 PRPYYRFADTISPDVWFEPTERPETSNSPASI 743
PR YYR A PDVW + E + S+
Sbjct: 576 PR-YYR-AGGEEPDVWLTEAQVWEVKAADLSV 605
>gi|313235968|emb|CBY25113.1| unnamed protein product [Oikopleura dioica]
Length = 1020
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/572 (44%), Positives = 364/572 (63%), Gaps = 28/572 (4%)
Query: 173 KAGEFDPKMV-------ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVME 225
K G+++P + ACW++G+ VP+ L +GR+ T+ + N R+V+
Sbjct: 388 KEGDYNPTLANYHAINNACWKEGKPVPYAALCQTLKCCEETSGRLNKTEYLANFYRSVIA 447
Query: 226 -TTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLG 284
T EDL+ ++++ N +A +EG+ELGIGD +IKA+++A GR + +K Q MGDLG
Sbjct: 448 LNTAEDLLTAIHMSLNLLAATYEGVELGIGDMVLIKAISQATGRPNAKIKADMQSMGDLG 507
Query: 285 LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQ 344
VA+ S+ SQ +M KP PL + KV+ + +AK +G SQ K + IK LLVA E +
Sbjct: 508 EVAENSKGSQKLMFKPPPLKMEKVYGQLQKVAKVSGNSSQNTKVDLIKGLLVACVGPEAR 567
Query: 345 YLIRLLQSKLRIGLAEQTLLAALGQAAVYNE-QHSKPPPNIQSPLEEAAKIVKQVFSVLP 403
+LIR KLRIG++E T+L+AL +A V++E +K + + VK+ + LP
Sbjct: 568 FLIRSCAGKLRIGVSESTVLSALARAIVFHELGETKKGKFTKERYDIVEAKVKEAYCELP 627
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF-QDMEFTCEYKYD 462
Y+ I+ ALLT G NL+ S PG+P+ PMLA PTK ++EI+ +F EFT EYKYD
Sbjct: 628 NYKIIINALLTHGSENLAEHVSLQPGVPLKPMLAHPTKAITEILTRFGAGAEFTAEYKYD 687
Query: 463 GERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKK--PSVRSFVLDCEIVAYDRE 520
GERAQIH LEDGS +YSRN E NT K+PDV +SR+ +V S V+D E VA+D
Sbjct: 688 GERAQIHLLEDGSFRVYSRNQEDNTSKYPDV---MSRMPNCINNVTSAVIDSESVAWDPA 744
Query: 521 KQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEE 580
++ILPFQ L+TR RK+ S+IKV VCI+AFD+LY NG+ L+++ LR RRE L+ F+
Sbjct: 745 TKQILPFQVLTTRKRKDAVASEIKVQVCIHAFDLLYLNGESLVKKSLRERRELLHTHFKS 804
Query: 581 EPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKD 640
G F FAT ++DE+Q FLD AV S EGL++K ++ +YE SKRS +WLKLKKD
Sbjct: 805 IEGEFVFATARDMSEIDELQVFLDQAVKDSTEGLMVKALED--SYEISKRSHSWLKLKKD 862
Query: 641 YIES-IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
Y+ S + DS+D++ + A++G+GKR+G YG FLL +D++NEE+Q++CK+GTG ++ L
Sbjct: 863 YLGSGVADSVDVLVMGAYYGKGKRSGNYGGFLLGVFDADNEEYQTVCKLGTGLTDENL-- 920
Query: 700 RSSSLRSKVIPKPRPYYRFA-DTISPDVWFEP 730
K+ +PR + S DV+FEP
Sbjct: 921 -------KLFTEPRKNRTIVLEVFSADVYFEP 945
>gi|157872853|ref|XP_001684953.1| putative DNA ligase I [Leishmania major strain Friedlin]
gi|68128023|emb|CAJ06835.1| putative DNA ligase I [Leishmania major strain Friedlin]
Length = 681
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/572 (43%), Positives = 353/572 (61%), Gaps = 19/572 (3%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
E VPF + V IS R+ + +L V+E PEDLVPV+YL NK AP HEG
Sbjct: 50 EPVPFAAVVDVLADISATGSRLECLKQLTFLLLAVIERCPEDLVPVMYLVINKHAPQHEG 109
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELGIGDA ++KA+AE CG TE+ K++Y++ GDL +A+ + Q + KP PL+ V
Sbjct: 110 VELGIGDAVLVKAVAECCGMTETRAKEEYRQSGDLAEIAQMHKQKQGTLMKPKPLSARSV 169
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F T++ IA +G+D ++ + IK LL A E ++R LQ K+RIGLAE + LAA+G
Sbjct: 170 FKTYKEIAMMSGRDVMRRRSDLIKGLLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVG 229
Query: 369 QAAVYN-----EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL--- 420
A + + H +Q+ L A + ++F +P + ++ A+L +G L
Sbjct: 230 YAFALHFLGGAQMHKMDEVQLQTLLNTGADSLARIFYEVPSLDVVLSAVLANGFMTLVPG 289
Query: 421 -------SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
+ S PG+P+ P LA PT ++ I+++ Q +FT EYKYDGERAQIHY +D
Sbjct: 290 SSIAKQYAKDLSIRPGLPVKPQLAYPTSSITVILDRLQGKKFTSEYKYDGERAQIHYDKD 349
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKP-SVRSFVLDCEIVAYDREKQKILPFQTLST 532
I+SRN+E +TGK+PDV+ + ++ P V+SF+LD E+VA E + FQ L
Sbjct: 350 KGFHIFSRNSETHTGKYPDVISMLPKVFDPVEVQSFILDSEVVAVHSETGALQAFQVLQH 409
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
R RKN++ D+ + VC++ FDILY NG+P L + L+ RRE L+ P FAT L
Sbjct: 410 RGRKNIAEEDVSIPVCVFVFDILYFNGEPQLNKTLQQRRELLWRCIHPLPAKLSFATHLD 469
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
S ++++Q FL+ ++ CEGL++KT++ +A Y P+KRS WLKLKKDY++ + D+LDLV
Sbjct: 470 SEKVEDVQTFLERSIADGCEGLMVKTLEEEANYTPAKRSHYWLKLKKDYMDGVTDTLDLV 529
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI-PK 711
PIAAF+G+GKRTGV+G FLLACYD +E+QSICKIGTGF + LE+ + SL+ V+ K
Sbjct: 530 PIAAFYGKGKRTGVFGGFLLACYDPKADEYQSICKIGTGFQDEELEKLTQSLKPFVVDEK 589
Query: 712 PRPYYRFADTISPDVWFEPTERPETSNSPASI 743
PR YYR A PDVW + E + S+
Sbjct: 590 PR-YYR-AGGEEPDVWLTEAQVWEVKAADLSV 619
>gi|401426011|ref|XP_003877490.1| putative DNA ligase I [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493735|emb|CBZ29025.1| putative DNA ligase I [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 767
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/572 (43%), Positives = 355/572 (62%), Gaps = 19/572 (3%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
E VPF + V IS R+ + +L V+E PEDLVPV+YL NK AP HEG
Sbjct: 136 EPVPFAAVVDVLADISATGSRLECLKQLTFLLLAVIERCPEDLVPVMYLVINKHAPQHEG 195
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELGIGDA ++KA+AE CG TE+ K++Y++ GDL +A+ + QS + KP PL+ V
Sbjct: 196 VELGIGDAVLVKAVAECCGMTEARAKEEYRQSGDLAEIAQMHKQKQSTLMKPKPLSAQSV 255
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F T++ IA +G+D ++ + IK LL A E ++R LQ K+RIGLAE + LAA+G
Sbjct: 256 FKTYKEIAMMSGRDVMRRRSDLIKGLLRDAQGPEVNLIVRGLQQKMRIGLAEPSALAAVG 315
Query: 369 QAAVYN-----EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL--- 420
A + + H +Q+ L A V ++F +P + ++ A+L +G L
Sbjct: 316 YAFALHFLGDAQMHQMDVVQLQTLLNTGADSVTRIFYEVPSLDVVLSAVLANGFMTLVPG 375
Query: 421 -------SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
+ S PG+P+ P LA PT ++ I+++ Q +FT EYKYDGERAQIHY ++
Sbjct: 376 SSIAKRYAKDLSIRPGLPVKPQLAYPTSSITVILDRLQGKKFTSEYKYDGERAQIHYDKE 435
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKPS-VRSFVLDCEIVAYDREKQKILPFQTLST 532
I+SRN+E +TGK+PDV+ + ++ P+ V SF+LD E+VA E + FQ L
Sbjct: 436 KGFYIFSRNSETHTGKYPDVISMLPKVFDPAEVDSFILDSEVVAVHPETGVLQAFQVLQH 495
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
R RKN++ D+ + VC++ FDILY NG+P L + L+ RRE L+ P FAT L
Sbjct: 496 RGRKNIAEEDVIIPVCVFVFDILYFNGEPQLNKTLQQRRELLWRCIHPLPAKLSFATYLD 555
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
S ++++Q FL+ ++ CEGL++KT++ +A Y P+KRS WLKLKKDY++ + D+LDLV
Sbjct: 556 SDKVEDVQTFLERSIADGCEGLMVKTLEEEANYTPAKRSHYWLKLKKDYMDGVTDTLDLV 615
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI-PK 711
PIAAF+G+GKRTGV+G FLLACYD +E+QSICKIGTGF + LE+ + SL+S V+ K
Sbjct: 616 PIAAFYGKGKRTGVFGGFLLACYDPKADEYQSICKIGTGFQDEELEKLTQSLKSFVVDDK 675
Query: 712 PRPYYRFADTISPDVWFEPTERPETSNSPASI 743
PR YYR A PDVW + E + S+
Sbjct: 676 PR-YYR-AGGEEPDVWLTEAQVWEVKAADLSV 705
>gi|356567248|ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
Length = 1402
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/576 (40%), Positives = 360/576 (62%), Gaps = 23/576 (3%)
Query: 176 EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
+++PK ACW+ G+ P++ ++ F+++ E GRI T ++CNM R+++ +P D++P V
Sbjct: 757 KYNPKEHACWKDGQPAPYLHIARTFNLLEGEKGRIKATSLLCNMFRSLLALSPADVLPAV 816
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL NKIA HE EL IG + + AL EACG +++ + + GDLG VA+ R +Q
Sbjct: 817 YLCTNKIAADHENKELNIGGSLVTAALEEACGTNRLKIREMFNKFGDLGDVAQECRQTQR 876
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
++ P PL I VF + I+ + G S +KK I L+ + + E ++L+R L LR
Sbjct: 877 LLAPPTPLLIKDVFSALQKISVQTGSRSTSRKKGIIVHLMRSCREKEMKFLVRTLVRNLR 936
Query: 356 IGLAEQTLLAALGQAAVYNE----QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPA 411
IG +T+L AL A N NI+ L+ + V + +++LP + IVP+
Sbjct: 937 IGAMLRTVLPALAHAVAMNSCPTLHQEGTAENIKEKLQVLSMAVVEAYNILPNLDLIVPS 996
Query: 412 LLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL 471
L+ G+ ++ S PGIPI PMLAK T G+ + + F++ FTCEYKYDG+RAQIH L
Sbjct: 997 LMNKGIDFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFENKAFTCEYKYDGQRAQIHKL 1056
Query: 472 EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK-QKILPFQTL 530
DGS+ ++SRN + +T +FPD++ + KP +F++D EIV DR+ +I+ FQ L
Sbjct: 1057 VDGSIRVFSRNGDESTSRFPDLIDIIKESSKPVASTFIMDAEIVGIDRKNGYRIMSFQEL 1116
Query: 531 STRARKN----VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF-EEEPGFF 585
S+R R V+ IKVD+CI+ FDI++ NG+ LL LR+RR++L D F +E+PG+F
Sbjct: 1117 SSRGRGGKDTLVTSESIKVDICIFVFDIMFANGEQLLGFPLRLRRKYLKDLFYDEKPGYF 1176
Query: 586 QFA--TTLTSID--------LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWL 635
++A TT+ + D L +I FL+ A+ +SCEG+++KT+D DA Y PSKRS WL
Sbjct: 1177 EYAKETTVEADDACLTCEATLTKINAFLEDALRSSCEGIMVKTLDVDAGYSPSKRSDKWL 1236
Query: 636 KLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEA 695
K+K+DY+E + D+LDLVPI A+HG G++ G Y FL+AC++ EE+QS+C++ +GFS++
Sbjct: 1237 KVKRDYVEGLNDTLDLVPIGAWHGNGRKAGWYSPFLMACFNPETEEYQSVCRVMSGFSDS 1296
Query: 696 M-LEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
+E + KV+ K PYY+ + +PD+WF P
Sbjct: 1297 FYIEMKQFFSGDKVLSKKPPYYQTRE--APDMWFCP 1330
>gi|340054328|emb|CCC48624.1| putative DNA ligase I [Trypanosoma vivax Y486]
Length = 696
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/596 (42%), Positives = 358/596 (60%), Gaps = 22/596 (3%)
Query: 168 VLLKKKAGEFDPKMVACWEKGER----VPFIFLSLVFDMISNETGRILITDIVCNMLRTV 223
VLL+ + + W + E+ VP+ ++ IS E+ R+ ++ N L V
Sbjct: 43 VLLRSPPDPYGESLSVVWPRAEKQPDAVPYAAVADTLADISAESSRLECIRLLANFLVAV 102
Query: 224 METTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDL 283
+ +P+DLVPVVYL NK PAHEG+ELG+GDA ++K +AE CG TE+H K Y++ GDL
Sbjct: 103 ILRSPQDLVPVVYLIMNKQGPAHEGVELGVGDALLLKVVAECCGITEAHAKIAYKQTGDL 162
Query: 284 GLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEP 343
VA+ + Q+ + KP L+ VF + R IA GKD ++ + IK LL A E
Sbjct: 163 AEVAQDKKRIQATLVKPKRLSALAVFQSLREIALMGGKDVARRRADVIKRLLRDAVGPEV 222
Query: 344 QYLIRLLQSKLRIGLAEQTLLAALGQA-AVYN----EQHSKPPPNIQSPLEEAAKIVKQV 398
++R LQ K+R+GLAE ++LAA+G A A+ N S P +Q L A +
Sbjct: 223 NLIVRALQQKMRVGLAEPSVLAAIGYAFAMVNVGIERITSFAPEQLQRELNIGATNFTRT 282
Query: 399 FSVLPVYEKIVPALLTDGVWNL----------SNTCSFTPGIPIGPMLAKPTKGVSEIVN 448
+ +P E ++ A+L G + + S PGIP+ P LA PT GV I++
Sbjct: 283 YYEVPSLEIVLGAMLEHGFPVIVPFTAEAKMHAEKLSIRPGIPVKPQLAHPTSGVGTILD 342
Query: 449 KFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKP-SVRS 507
+FQ FT EYKYDGERAQIHY +D +I+SRN+E +TGK+PD++ + + P SV S
Sbjct: 343 RFQGKAFTSEYKYDGERAQIHYHKDQGFQIFSRNSETHTGKYPDIISVLPQTFLPDSVES 402
Query: 508 FVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQL 567
F++D E+VA D E + FQ L R RKNV ++ + VC++ FD+LY NGQP + + L
Sbjct: 403 FIIDSEVVAVDVETGALQAFQVLQHRGRKNVLSENVTIPVCVFVFDLLYFNGQPQMAKPL 462
Query: 568 RVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEP 627
RRE L F FQFA L S D+D+IQ FL+ ++ EGL+IKT++ +A Y P
Sbjct: 463 AARREVLRAHFTPVHTKFQFAEHLDSGDVDDIQAFLERSIRDGAEGLMIKTLEEEAFYTP 522
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
+KRS WLKLKKDY++ + D+LDLVPI A++G+GKRTGV+G FLLACYD+ N+E+QSICK
Sbjct: 523 AKRSHYWLKLKKDYMDGVADTLDLVPIGAYYGKGKRTGVFGGFLLACYDTENDEYQSICK 582
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
IGTGF + LE + L+S ++ + YYR D DVW + ++ E + SI
Sbjct: 583 IGTGFQDDQLESITRVLQSCILEEQPRYYRTED--KADVWLQASQVWEVRAADLSI 636
>gi|403171394|ref|XP_003330631.2| DNA ligase 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|375169165|gb|EFP86212.2| DNA ligase 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 788
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/555 (43%), Positives = 339/555 (61%), Gaps = 54/555 (9%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
WEKG+ +P+ L+ F++I T R+ IT + L V+ TP++L+ V+YL N++ P
Sbjct: 188 WEKGKPIPYSSLAYTFNLIDGTTKRLEITKYLTQYLIQVISRTPDELLKVIYLCINRLCP 247
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+EG+ELGIG++ +IKA+ G VA+ S+
Sbjct: 248 DYEGIELGIGESLLIKAIGSFHG------------------VAQIVDHSKDY-------- 281
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
SQ KK I LL + E +++IR L+ KLRIGLAE+T+L
Sbjct: 282 ------------------SQAKKVGIITKLLASCQGEEAKFIIRSLEGKLRIGLAERTVL 323
Query: 365 AALGQAAVYN-------EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGV 417
AL AAV + ++ + E +IVK VFS +P Y+ ++PALL G+
Sbjct: 324 VALANAAVRTGVGNKSNSKRKSSSEDLAKDILEGTEIVKAVFSEIPSYDLVIPALLQGGI 383
Query: 418 WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE 477
L C TPG+P+ PMLAKPTK +SE++++F+ +FTCEYKYDGERAQIH+L DGS+
Sbjct: 384 KGLRENCKLTPGVPLKPMLAKPTKAISEVLDRFEGHKFTCEYKYDGERAQIHFLSDGSIS 443
Query: 478 IYSRNAERNTGKFPDVVLAVSR-LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
I+SRN+E + K+PD+V + R +KK R+FVLD E VA+DR +KILPFQ LS R RK
Sbjct: 444 IFSRNSENMSVKYPDMVDQLPRAIKKDVTRNFVLDAEAVAWDRSTKKILPFQELSKRKRK 503
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+V +I + V I+AFD+LY N QPL+ RR L + F + G F FAT + ++
Sbjct: 504 DVKAEEITIQVHIFAFDLLYLNDQPLINTDFSHRRSLLKEHFNQIEGEFSFATAVDVDNV 563
Query: 597 DEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+EIQ FL+ +V A CEGL++K +D + A YEPS+RS+NWLK+KKDY+ IGDSLDLV +
Sbjct: 564 EEIQTFLEQSVKAGCEGLMVKMLDGQSAHYEPSRRSMNWLKVKKDYLAGIGDSLDLVVVG 623
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
A+HG+GKRT VYGAFLLACYD E +Q+ICK+GTGFSE +L+ + L + + Y
Sbjct: 624 AYHGKGKRTAVYGAFLLACYDPETESYQTICKLGTGFSEEVLDCLHTKLHPLELTVKKNY 683
Query: 716 YRFADTISPDVWFEP 730
Y ++ PDVWFEP
Sbjct: 684 YDVGES-KPDVWFEP 697
>gi|302781670|ref|XP_002972609.1| hypothetical protein SELMODRAFT_97261 [Selaginella moellendorffii]
gi|300160076|gb|EFJ26695.1| hypothetical protein SELMODRAFT_97261 [Selaginella moellendorffii]
Length = 620
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/569 (41%), Positives = 358/569 (62%), Gaps = 16/569 (2%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ E P++ L+ F+++ E+GR T+++CNM R+++ + D++ +YL N+IAP
Sbjct: 1 WKADELAPYLHLARTFELVEKESGRYRTTEMLCNMFRSLLALSSADVLAALYLTTNRIAP 60
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+E ++L IG A+++ A+ EA G +S +K+ Y MGDLG VA+A + +QSM+R P PL
Sbjct: 61 DYENVDLSIGTATVVMAIEEATGTPKSKLKEMYNRMGDLGDVAQACKQTQSMLRNPQPLL 120
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I VF T + I+KE G S +KKN + LL + + E YL+R L +RIG +T+L
Sbjct: 121 IRHVFSTLKQISKETGIGSSSRKKNMVVGLLRSCREKEVTYLVRTLVQNMRIGAMVRTVL 180
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
AL +A V + +S +E + ++ + F+++P ++ +VP LL G+ L+
Sbjct: 181 PALAEAVVLHRDNSAVAALKH---QEVSALIVEAFNLVPNFDILVPFLLEQGMVALATRM 237
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
TPGIPI PMLAK GV +++ F+ FT E+KYDG RAQIH L+DGSV I+SRN E
Sbjct: 238 VLTPGIPIKPMLAKIANGVPDVLKIFEGKSFTSEFKYDGFRAQIHLLDDGSVRIFSRNCE 297
Query: 485 RNTGKFPDVV--LAVSRLKKPSVRSFVLDCEIVAYDR-EKQKILPFQTLSTRAR-----K 536
+T +FPDVV + S +K+ S RSF++D E+VA DR K++ FQ+LSTR R
Sbjct: 298 NSTSRFPDVVEIIKSSTIKRDS-RSFIIDAELVAVDRANNNKLMAFQSLSTRERGGRTGT 356
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEE-EPGFFQFATTLTSID 595
V L I V+VC++ FD++Y +G+P ++ LR+RR ++D F E PG+ FA T +
Sbjct: 357 GVDLDKITVNVCVFVFDVMYVDGEPFVKAPLRLRRRRMHDLFPEVRPGYLDFAAEKTEHN 416
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+ IQ FL A+ ASCEGL++K +D + Y P+KR+ +WLKLK+DY+E + DSLDLVPI
Sbjct: 417 TEHIQDFLGQAIAASCEGLMVKALDEGSFYAPAKRAESWLKLKRDYVEGLSDSLDLVPIG 476
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE-RSSSLRSKVIPKPRP 714
A++G G++ G + FLLACYD + E FQS+C++ +GF++A E+ + K++ K
Sbjct: 477 AWYGNGRKAGWHSPFLLACYDPDQEVFQSVCRVMSGFTDAFYEQMKEFYSEDKLLSKKPS 536
Query: 715 YYRFADTISPDVWFEPTERPETSNSPASI 743
YY+ + PDVWF + E + +I
Sbjct: 537 YYQTLE--RPDVWFAAAKVWEIRGADYTI 563
>gi|32968197|emb|CAA80615.2| DNA ligase I [Crithidia fasciculata]
Length = 766
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/558 (43%), Positives = 348/558 (62%), Gaps = 19/558 (3%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
IS R+ + +L VME PEDL V+YL NK AP HEG+ELGIGDA ++K +
Sbjct: 149 ISATGSRLECVRHLTFLLLAVMERCPEDLAAVLYLVINKQAPQHEGVELGIGDAVLVKVV 208
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKD 322
AE CG TE+ K++Y++ GDL +A + QS + KP L+ VF+T++ IA +GKD
Sbjct: 209 AECCGMTETRAKEEYRQSGDLAEIAHNHKQKQSTLMKPRALSARHVFNTYKDIALMSGKD 268
Query: 323 SQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA-AVY----NEQH 377
++ + IK LL A E ++R LQ K+RIGLAE + LAA G A A++ N+
Sbjct: 269 VMRRRSDLIKRLLRDAQGPETNLIVRGLQQKMRIGLAEPSALAATGYAFALHFLGRNQMR 328
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL----------SNTCSFT 427
+Q+ L AA + ++F +P + ++ A+L +G L + S
Sbjct: 329 QMSEGQLQTMLNTAAASLARIFYEVPSLDVVLRAVLDNGFMILVPGSSVALQHAQDLSIR 388
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNT 487
PG+P+ P LA PT G+ I+++ Q FT EYKYDGERAQIHY +I+SRN+E +T
Sbjct: 389 PGLPVKPQLAHPTSGIXVILDRLQGKRFTSEYKYDGERAQIHYQAGRGFQIFSRNSETHT 448
Query: 488 GKFPDVVLAVSRL-KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
GK+PDV+ + ++ +V SF++D E+VA + E + FQ L R RKN++ D+++
Sbjct: 449 GKYPDVISMLPKVFDAAAVHSFIIDSEVVAVNPETGALQAFQVLQHRGRKNIAEEDVRIP 508
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFDILY NG+P L + L+ RR L+++F F FAT L S +++++QKFLD +
Sbjct: 509 VCVFAFDILYFNGEPQLGKTLQERRHVLWNAFTPLTAAFAFATHLDSDNVEDVQKFLDKS 568
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
+ CEGL++KT++ ATY P+KRS WLK KKDYI+ + D+LDLVPIAAF+G+GKRTGV
Sbjct: 569 IADGCEGLMVKTLEEQATYTPAKRSHFWLKFKKDYIDGVTDTLDLVPIAAFYGKGKRTGV 628
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI-PKPRPYYRFADTISPD 725
+G FLLACYD +E+QSICKIGTGF + LE + +L+ V+ KPR YYR D PD
Sbjct: 629 FGGFLLACYDPEADEYQSICKIGTGFPDEELERLTQALKPFVVHDKPR-YYRAEDD-GPD 686
Query: 726 VWFEPTERPETSNSPASI 743
VW + E + S+
Sbjct: 687 VWLTEAQVWEVKAADLSV 704
>gi|428168931|gb|EKX37870.1| hypothetical protein GUITHDRAFT_158553 [Guillardia theta CCMP2712]
Length = 672
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/602 (40%), Positives = 364/602 (60%), Gaps = 39/602 (6%)
Query: 157 KEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIV 216
+++++E + + G D + W++GE VPF LS D + + R+ I IV
Sbjct: 32 EQRVSEEEGRASAGAAEGGRGDEDVHVEWKEGEPVPFSHLSSTLDRVQGTSKRLEIISIV 91
Query: 217 CNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQ 276
L TV TP+DLVP VY+ ++AP +GLELG+GD+ +++A+A A G S +K++
Sbjct: 92 TAALSTVRRLTPDDLVPFVYIMLGRVAPPFKGLELGVGDSVLVQAIAAASGHETSKIKEE 151
Query: 277 YQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLV 336
Y+++GDLG VA A+R +Q + LT+ VF+ + A G +S +++++ I LLV
Sbjct: 152 YKKVGDLGQVAVATRRNQLSLSPVRALTVRSVFEAMKSAAAIEGSESVKQRRDIILCLLV 211
Query: 337 AATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN------EQHSKPPPNIQSPLEE 390
AA E ++ R+LQ KLR+GLAE ++++AL V + P P EE
Sbjct: 212 AARGNESLWITRILQGKLRVGLAEPSVISALAATFVLHPPASSSSSFPSPLPPPSLSPEE 271
Query: 391 -------AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
A + +K+ + P YE +VP LL L C TPG+P+ PMLA P++GV
Sbjct: 272 FKKESSIATEALKEALAQQPCYETVVPILLEHSYQQLPVLCPLTPGVPVKPMLAHPSRGV 331
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRL-KK 502
SE+ +F + TCEYKYDGER+QIH+LED V+++SRN+E TGKFPD+V + ++ +
Sbjct: 332 SEVTKRFGNKTVTCEYKYDGERSQIHWLEDQKVKVFSRNSEDTTGKFPDIVELLPKIVEG 391
Query: 503 PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPL 562
V+S +LDCE+VA +R +ILPFQ LSTRARKNV LS +KVDVC++AFDIL NG+ L
Sbjct: 392 GGVKSAILDCEVVAVERATNRILPFQILSTRARKNVQLSSLKVDVCVFAFDILLLNGESL 451
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRD 622
++ L RR+ L + E G F+F +++ +++++F A+ SCEGL+IK+++ +
Sbjct: 452 MRRPLIERRQILRQNLREVEGRFKFVSSIDPTSPEDMEEFFQVALQDSCEGLMIKSLEGE 511
Query: 623 -ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEE 681
+ Y P KRS WLKLKKDYIE + D+ DLV + A+ GRGKRTGVYGAFLLACY+S +E
Sbjct: 512 PSQYAPDKRSREWLKLKKDYIEGMVDTFDLVVVGAWQGRGKRTGVYGAFLLACYNSETDE 571
Query: 682 FQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPA 741
F+++CK+G +KV P PDVWF+P+ E S +
Sbjct: 572 FETVCKLGN---------------AKVPEGPN---------QPDVWFDPSTVWEISAADL 607
Query: 742 SI 743
S+
Sbjct: 608 SL 609
>gi|156083667|ref|XP_001609317.1| DNA ligase I [Babesia bovis T2Bo]
gi|154796568|gb|EDO05749.1| DNA ligase I [Babesia bovis]
Length = 773
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/636 (40%), Positives = 364/636 (57%), Gaps = 35/636 (5%)
Query: 142 PSPKKRKVNVNSVSAKEKIAELKSNIVLLKKK------AGEFDPKMVACWE-------KG 188
P+ K++ VN+ A E NI L + + +FDP + +G
Sbjct: 84 PAKKQKTVNIRRSEADEPSVGSLFNISLKENDKNADIMSAKFDPSLFDISHYKSTFPPQG 143
Query: 189 ERVPFIF------LSLVFDMISNETG-RILITDIVCNMLRTVMETTPEDLVPVVYLAANK 241
R +F L V D + TG R + ++ N R ++ P D++P +YL N+
Sbjct: 144 NRDSLLFNFLAEILQKVEDAFGSGTGSRKYVFTLLSNFFRVLIYHQPSDVIPAMYLMLNR 203
Query: 242 IAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAK-ASRSSQSMMRKP 300
I+ +EG E G+GD +IKA+A++ G++E VK+ + DLG VA +S +SQ+++R P
Sbjct: 204 ISAEYEGEEFGVGDTMLIKAMAQSYGKSEKAVKEMLSKHEDLGKVASLSSCTSQTIVRLP 263
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
D LTIT VF+ F+ IA+E GK+S +K + IK +L A E +Y++R LQ K+RIG+
Sbjct: 264 D-LTITSVFNNFKTIAREEGKNSMTRKTDIIKRMLSCAKKIEAKYIVRCLQQKMRIGVNA 322
Query: 361 QTLLAALGQAAVYNEQHSKPPPNIQS----------PLEEAAKIVKQVFSVLPVYEKIVP 410
TL ++ A + P I + + K VK + LP E +V
Sbjct: 323 PTLFQSIADATYLTKASKDGQPAIGDIRTSGIEQVDSINDMEKAVKTATTYLPCIETVVG 382
Query: 411 ALLT-DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF--QDMEFTCEYKYDGERAQ 467
LL D C PGIP+ PMLAK S+IV +D FTCEYKYDGER Q
Sbjct: 383 HLLDGDTCDEFLEHCKIRPGIPVRPMLAKAISKTSDIVQAIGAEDNPFTCEYKYDGERLQ 442
Query: 468 IHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
IH LED V+++SRN E GK+PDV+ KP V+ ++D E+VAYDR KILPF
Sbjct: 443 IHLLEDRCVKLFSRNMENLCGKYPDVMENFLTSVKPDVQDCIIDSEVVAYDRSSGKILPF 502
Query: 528 QTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
Q LSTR RK V+++D+ + VCIY FDILY NG+ ++ + L+ RR+ L + E+ G F
Sbjct: 503 QQLSTRKRKGVTVNDVTIQVCIYPFDILYLNGEQIVDKSLKERRKALESTVYEKDGLLHF 562
Query: 588 ATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGD 647
A L++I FL AV SCEGL+IK++D ++TYEP KRS NWLK KKDYI+ +GD
Sbjct: 563 ARHKDMDSLEDIDDFLRQAVSDSCEGLMIKSLDSESTYEPQKRSNNWLKFKKDYIDGMGD 622
Query: 648 SLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSK 707
S+DLVPIAAF G+GKRT VYG++LLA YD +E +QS+CK GTGFS+ L++ SL+
Sbjct: 623 SVDLVPIAAFLGKGKRTSVYGSYLLAVYDPIHEVYQSVCKTGTGFSDQTLKDLFDSLQEH 682
Query: 708 VIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ Y +D PDVWF+P + E + SI
Sbjct: 683 TVQNKPSIYVVSDKFEPDVWFQPAKVWECKAADLSI 718
>gi|209881935|ref|XP_002142405.1| DNA ligase I, ATP-dependent family protein [Cryptosporidium muris
RN66]
gi|209558011|gb|EEA08056.1| DNA ligase I, ATP-dependent family protein [Cryptosporidium muris
RN66]
Length = 820
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/543 (43%), Positives = 350/543 (64%), Gaps = 29/543 (5%)
Query: 215 IVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVK 274
++ N+ RT++ P DL+P Y+ NKI+P +E E G+G++ IIK +AE GR+E+ +K
Sbjct: 194 VLANLFRTIIYHNPTDLIPATYICLNKISPDYENREFGVGESIIIKCIAEVLGRSENSIK 253
Query: 275 KQYQEMG--DLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
+ DLG +A ASR + ++ +P LTI +VF+ +A G +Q+KK+++IK
Sbjct: 254 EDLASGSYEDLGEIAAASRYAMRVLFEPPRLTIQEVFNEMYALACIHGNQAQQKKRDKIK 313
Query: 333 ALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV----------YNE---QHSK 379
L+VAA E +++IR LQ +LRIG+ + T+ +L + V Y++ Q K
Sbjct: 314 KLMVAAKQSEVKFIIRFLQGRLRIGVQQVTVYNSLANSFVLTRNSDENSKYSDIRLQEFK 373
Query: 380 PPPNIQ--SPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW--NLSNTCSFTPGIPIGPM 435
NI+ + + + K + LP EKI+ L GV +L C+ PGIP PM
Sbjct: 374 FKTNIELDNTILDMEKAFRSSLCQLPNIEKIIDIALK-GVTPNDLRLKCTLIPGIPCEPM 432
Query: 436 LAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY--LEDGS--VEIYSRNAERNTGKFP 491
LA+PTKG+SEI+++F+ M+FT EYKYDGERAQIH LE G+ ++I+SRN E T ++P
Sbjct: 433 LARPTKGISEILSRFEKMKFTAEYKYDGERAQIHVYKLESGNYNIDIFSRNLENITNRYP 492
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYA 551
DV +++ +V +LDCE+VAY E +KILPFQ LSTR RK+V+++DIKV VC++
Sbjct: 493 DVAISIKESLINTVEDCILDCEVVAYSIENEKILPFQVLSTRKRKDVNINDIKVHVCVFL 552
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASC 611
FD ++ NG L++ L RRE+L E P F + +D ++ FL A++ +C
Sbjct: 553 FDCMHFNGNSLIKYSLAERREYLKKCILEIPNKIYFVKNCITDKIDVLETFLAEAIENNC 612
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
EGL++KT++ +A+YEPSKRSLNWLK+KKDYI+ I DS+D+VPIAAF+G+GKR G+YG FL
Sbjct: 613 EGLMVKTLNENASYEPSKRSLNWLKIKKDYIDGIMDSIDVVPIAAFYGKGKRCGIYGTFL 672
Query: 672 LACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK--PRPYYRFADTIS--PDVW 727
LA Y+ N+E +++ICKIGTGFSE +L+ + L +I + YY D+IS PDVW
Sbjct: 673 LAVYNPNSEIYETICKIGTGFSEEILQRLYNMLTEYIISDISAKSYYH-VDSISLKPDVW 731
Query: 728 FEP 730
FEP
Sbjct: 732 FEP 734
>gi|62321656|dbj|BAD95276.1| DNA ligase like protein [Arabidopsis thaliana]
Length = 336
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/273 (75%), Positives = 245/273 (89%)
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
+EDG+ EIYSRNAERNTGK+PDV LA+SRLKKPSV+SF+LDCE+VA+DREK+KILPFQ L
Sbjct: 1 MEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQIL 60
Query: 531 STRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
STRARKNV+++DIKV VCI+AFD+LY NGQ L+QE L++RRE LY+SFEE+PG+FQFAT
Sbjct: 61 STRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLKIRREKLYESFEEDPGYFQFATA 120
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLD 650
+TS D+DEIQKFLDA+VD CEGLIIKT+D DATYEP+KRS NWLKLKKDY++SIGDS+D
Sbjct: 121 VTSNDIDEIQKFLDASVDVGCEGLIIKTLDSDATYEPAKRSNNWLKLKKDYMDSIGDSVD 180
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP 710
LVPIAAFHGRGKRTGVYGAFLLACYD + EEFQSICKIGTGFS+AML+ERSSSLRS+VI
Sbjct: 181 LVPIAAFHGRGKRTGVYGAFLLACYDVDKEEFQSICKIGTGFSDAMLDERSSSLRSQVIA 240
Query: 711 KPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
P+ YYR D+++PDVWFEPTE E + +I
Sbjct: 241 TPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTI 273
>gi|325188612|emb|CCA23144.1| DNA ligase putative [Albugo laibachii Nc14]
Length = 882
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 254/593 (42%), Positives = 359/593 (60%), Gaps = 61/593 (10%)
Query: 191 VPFIFLSL--VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLA-ANKIAPAHE 247
P I+ SL + + I +T R++I D + R ++ET+P+DLVP +YL +AP +E
Sbjct: 220 APLIYASLATLLNEIEKDTSRLVIQDRTTSFYRKIVETSPKDLVPCIYLCLGTDLAPPYE 279
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMR--------K 299
+++G+GDA ++KA+ EA G + VK+ YQ+ GDLG VA+ +R Q++++ K
Sbjct: 280 NIKIGVGDAILMKAIGEATGTSLKFVKELYQKEGDLGQVAQNARCKQNVLQGFTSNTRQK 339
Query: 300 PDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------EPQYLIRLLQS 352
L++ V F+ IA AG SQ++K IK LLV + +++IR LQ
Sbjct: 340 SAALSVGDVHLQFKKIAMLAGNQSQQQKCTMIKYLLVKCQNGGDKNQSEAAKFIIRGLQG 399
Query: 353 KLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPAL 412
KLRIGLAE++++ AL A + S + + A VK+ F+ P ++ ++ A
Sbjct: 400 KLRIGLAEKSIVTALTYAFMKESDRSD-----RQKQQMALAYVKKAFAERPSFDALIDAF 454
Query: 413 LT-----DGVW--------NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
+W ++++ C TPG P+ PMLA+PTK + + ++FQ FTCEY
Sbjct: 455 YHVQKERSTLWLSTPTDFESVASLCVLTPGTPVAPMLARPTKTYAMVFDRFQGKPFTCEY 514
Query: 460 KYDGERAQIHYLEDGS---VEIYSRNAERNTGKFPDVVL----AVSRLKKPSVRSFVLDC 512
KYDGERAQIH LE + V I+SRN E T +FPDV + A+S + + ++D
Sbjct: 515 KYDGERAQIH-LESHAQQKVHIFSRNFENTTERFPDVKMNFLNAIS--ASEGLDNCIMDA 571
Query: 513 EIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRRE 572
EIVA DR +K LPFQ LSTR+RKNV + DIKV VC+YAFD+LY NG LL + LR RRE
Sbjct: 572 EIVAIDRITRKRLPFQVLSTRSRKNVRIEDIKVAVCVYAFDLLYLNGDSLLSKSLRERRE 631
Query: 573 HLYDSFEEEPGFFQ----FATTLTSIDLD---------EIQKFLDAAVDASCEGLIIKTM 619
L+ F+ + G F+ T T D+D I+ FL+ A + CEGL++KT+
Sbjct: 632 KLHALFQPQDGSFENVQCMDVTDTRHDIDSDALEEAISHIRSFLEKATEEHCEGLMVKTL 691
Query: 620 DRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNN 679
D DATYEP+ RS WLK+KKDY++ IGDS DL+PI AFHGRGKRTGVYGA+LLACYD +
Sbjct: 692 DEDATYEPANRSHKWLKVKKDYLDGIGDSTDLIPIGAFHGRGKRTGVYGAYLLACYDPDL 751
Query: 680 EEFQSICKIGTGFSEAMLEERSSSLRSKVIPK-PRPYYRFADTISPDVWFEPT 731
+ +Q I K+GTG S+ ML E + L+SK + + PR Y D I PDVWFEP+
Sbjct: 752 DMYQCITKLGTGLSDEMLRELHAQLQSKKVEQIPREYV-VTDNIKPDVWFEPS 803
>gi|428671778|gb|EKX72693.1| ATP-dependent DNA ligase domain containing protein [Babesia equi]
Length = 709
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/555 (43%), Positives = 336/555 (60%), Gaps = 19/555 (3%)
Query: 204 SNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALA 263
S + R + ++ N R ++ P DL+P VY+ N+I P +E ELG+GD+ IIK++A
Sbjct: 106 SGKGSRKSVLTLLSNFFRVLIFYNPSDLIPAVYILQNRICPEYESTELGVGDSLIIKSMA 165
Query: 264 EACGRTESHVKKQYQEMGDLGLVAK-ASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKD 322
EA +++ +K + DLG+VA +S +SQ++++ PD LTI+ +F FR IA GK+
Sbjct: 166 EAYSKSDKTIKALVAKHEDLGMVASLSSCTSQTIVKLPD-LTISGIFSQFRSIADMVGKN 224
Query: 323 SQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP 382
S +K++ IK LL++A E +Y++R LQ KLRIG+ T+ + A Y + +K
Sbjct: 225 SINRKRDIIKKLLISAKKSEAKYIVRYLQQKLRIGIGINTIFQCIADA-FYLTRPAKGDS 283
Query: 383 -----------NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT-DGVWNLSNTCSFTPGI 430
N+ LE+ V+ + +P +K+V LL D +L C TPGI
Sbjct: 284 SAIGDVRIADLNLDYTLEDMEVSVRTAITNVPCIDKVVGCLLNGDTAHDLKEHCKITPGI 343
Query: 431 PIGPMLAKPTKGVSEIVNKF--QDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
P+ PMLAKP EI+ + FTCEYKYDGER QIH ++ +V ++SRN E +
Sbjct: 344 PLRPMLAKPVNTTHEIIQSIGSDGVTFTCEYKYDGERVQIHMVDQETVTLFSRNMENLSE 403
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVC 548
K+PDV+ + KP + S +LDCEIVA+D EK ILPFQ LSTR RK+V L +I V VC
Sbjct: 404 KYPDVIDKFLKSVKPGLTSCILDCEIVAFDGEK--ILPFQNLSTRKRKDVDLDNITVHVC 461
Query: 549 IYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVD 608
++ FDILY NG+PL+ L RRE + D ++ G FA LDEI FL AV
Sbjct: 462 LFPFDILYCNGEPLVTLPLNKRRESMRDWLIQKEGVLMFANHKDMDSLDEIDDFLRLAVA 521
Query: 609 ASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
SCEGL+IK++D ATYEP KRS WLK KKDYI + DS+DLVPIAAF+G+GKRT VYG
Sbjct: 522 DSCEGLMIKSLDDGATYEPQKRSNKWLKFKKDYIAGMSDSVDLVPIAAFYGKGKRTNVYG 581
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
++LLA YD E FQ +CK GTGF++ L+ +L+ +IP P Y +D + PDVWF
Sbjct: 582 SYLLAIYDPVQEIFQGVCKTGTGFTDQTLKYLYDTLQQHIIPSKLPTYEVSDKLEPDVWF 641
Query: 729 EPTERPETSNSPASI 743
P + E + SI
Sbjct: 642 MPEKVWECKAADLSI 656
>gi|358338704|dbj|GAA28692.2| DNA ligase 1 [Clonorchis sinensis]
Length = 553
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/486 (46%), Positives = 307/486 (63%), Gaps = 39/486 (8%)
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT++ VF + IA +G SQ KK +I +LLVA +CE +YLIR L KLRI
Sbjct: 1 MFTPKPLTVSMVFSKLKEIASMSGNSSQAKKVEKICSLLVACRECEAKYLIRSLSGKLRI 60
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSP------------------LEEAAKIVKQV 398
GLAEQ++L ALGQAA HS + P +E VK+
Sbjct: 61 GLAEQSVLTALGQAAAVTPFHSAAAVKVGVPSRLLDVSTGVSNEQWKTRVEACVANVKKA 120
Query: 399 FSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
+ V P Y+K+V LL DG L C TPGIP+ PMLA PT+GV +++ +F + +FTCE
Sbjct: 121 YCVCPNYDKLVAGLLADGPDGLHFHCFITPGIPVKPMLAHPTRGVVDVLKRFDEADFTCE 180
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV-------LAVSRL----------- 500
YKYDGERAQIH L+ + +YSRN E NT K+PD+V L ++L
Sbjct: 181 YKYDGERAQIHVLDPRTCRVYSRNQEDNTSKYPDIVNTLMPRVLQSAKLTEAALQHMGSE 240
Query: 501 ---KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYR 557
K +V S +LD E+VA+DR+ ILPFQ LSTR RK+V + +KV VC+YAFDIL+
Sbjct: 241 ADSKNTAVESCILDAEVVAWDRQGGHILPFQVLSTRKRKDVDEAAVKVQVCVYAFDILFI 300
Query: 558 NGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIK 617
NG L+++ LRVRRE + ++F + G F AT+L S D ++I FL+ ++ +CEGL++K
Sbjct: 301 NGVSLIEKPLRVRREIIRETFSQIHGEFMLATSLDSSDTEQIASFLEESIKGNCEGLMVK 360
Query: 618 TMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDS 677
T+DR++TYE +KRS NWLKLKKDY++++GD+LDLV I FHG GKR G YG FLLACYD+
Sbjct: 361 TLDRNSTYEIAKRSHNWLKLKKDYLDNVGDTLDLVVIGGFHGSGKRAGRYGGFLLACYDA 420
Query: 678 NNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETS 737
EE+Q+ICKIGTG ++ L + S+ + ++ + YY+FA + PD WFEPT+ E
Sbjct: 421 ECEEYQTICKIGTGMTDEDLAKFSAYFKDYIVDNAKAYYQFAPGLVPDHWFEPTQVWEVK 480
Query: 738 NSPASI 743
+ SI
Sbjct: 481 AADLSI 486
>gi|380475426|emb|CCF45260.1| DNA ligase [Colletotrichum higginsianum]
Length = 553
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/471 (46%), Positives = 309/471 (65%), Gaps = 37/471 (7%)
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------C 341
M KP PLTI+ V IA +G +Q +K + IK LL AA
Sbjct: 1 MFKPKPLTISGVHKGLMGIATVSGNGAQGRKVDAIKKLLSAADSHSSGKVDISKDKGGPS 60
Query: 342 EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSV 401
E +YL+R L+ KLR+GLAE+++L +L QA ++E +K + +E+A I+K V+S
Sbjct: 61 EAKYLVRFLEGKLRLGLAEKSVLVSLAQAVAFHEADAKGQVPKTTDVEQAEAILKTVYSE 120
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
LP Y+ I+PA++ G+ NL C PG+P+ PMLAKPTK ++E++++F+D FTCEYKY
Sbjct: 121 LPSYDVIIPAMVEHGIMNLREHCKLKPGVPLKPMLAKPTKAITEVLDRFEDQTFTCEYKY 180
Query: 462 DGERAQIHYLE-------------------DGSVEIYSRNAERNTGKFPDVVLAVSRLKK 502
DGERAQIHY+ DG I+SRN+E + K+PD++ + K
Sbjct: 181 DGERAQIHYVAKSADEEISQSLPGATKAAADGVASIFSRNSEDLSKKYPDILAKLHTWVK 240
Query: 503 PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPL 562
+SFVLDCE VA+D E++K+LPFQ L TR +K+V + D+KV VC++AFD+LY NG+ +
Sbjct: 241 EDTKSFVLDCETVAWDVEEKKVLPFQQLMTRKKKDVKIEDVKVKVCVFAFDLLYLNGEAI 300
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-R 621
++ LR RR+ L D+F+ G F FAT + +L++IQ FLD +V ASCEGL++K +D
Sbjct: 301 VERPLRERRDLLEDAFQPVEGEFSFATHMDGQELEQIQVFLDESVKASCEGLMVKMLDGS 360
Query: 622 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEE 681
++ YEPSKRS NWLK+KKDY+ IGDSLDLV + A+HG+GKRT VYGAFLLACY+ ++E
Sbjct: 361 ESGYEPSKRSRNWLKIKKDYLSGIGDSLDLVVLGAYHGKGKRTSVYGAFLLACYNPSSES 420
Query: 682 FQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF--ADTISPDVWFEP 730
++++C IGTGFSEA+LEE + L VI +P+P+Y PDVWFEP
Sbjct: 421 YETVCNIGTGFSEAVLEELHTQLSDIVIDRPKPFYAHSSGGQHQPDVWFEP 471
>gi|312080106|ref|XP_003142459.1| DNA ligase [Loa loa]
Length = 579
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/563 (41%), Positives = 329/563 (58%), Gaps = 72/563 (12%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE++P++ L+ F+ I + R+ I I+ N V+E TP +L VYL NK+ P
Sbjct: 16 WKSGEKIPYLCLAKTFEDIEATSSRLEIIKILANFFGKVIERTPNELAICVYLCVNKLGP 75
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+EG+ELGI + +++KA+A+A GR +++ + GDLGLVA+ SRS+Q ++ P PLT
Sbjct: 76 TYEGMELGIAEGALMKAIAQATGRKIDKLREDLNQKGDLGLVAQMSRSNQRILFTPAPLT 135
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+T VF + +AK +G + KK + IK+LLV+ DCE +YLIR L KLRIGLAEQ++L
Sbjct: 136 VTSVFHKLQDMAKTSGHMAMNKKVDMIKSLLVSCRDCEARYLIRSLSGKLRIGLAEQSIL 195
Query: 365 AALGQAAV-YNEQHSKPPPNIQSPLEEAAK---IVKQVFSVLPVYEKIVPALLTDGVWNL 420
AL A + + S N + E A+ ++K +S P YEK++ A+L+DG+ L
Sbjct: 196 VALANAFTNFEAKKSGEKLNCEKMKERQAEDILLLKSTYSECPDYEKVIEAVLSDGLSKL 255
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
C TPGIP+ PMLA PTKG+ E++ +F D F CE+KYDGERAQIHY G ++I+S
Sbjct: 256 PEKCKITPGIPVKPMLAHPTKGIDEVLKRFGDSVFACEFKYDGERAQIHYDSSG-IKIFS 314
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
RN E NT K+PDV + ++ SF++D EIVA+D + ILPFQ LSTR RK V
Sbjct: 315 RNQENNTDKYPDVREQLKQIMDEETTSFIIDSEIVAFDPVHETILPFQILSTRKRKEVG- 373
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
G F + + D ++I
Sbjct: 374 ------------------------------------------GICGFVASKDTEDTEQIS 391
Query: 601 KFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
+FLD A+ +CEGL+IKT+D DATYE +KRS +WLKLKKDY+++IGD+LDL I AF G
Sbjct: 392 EFLDDAIKGNCEGLMIKTLDCDATYEIAKRSRSWLKLKKDYLDTIGDTLDLTVIGAFFGT 451
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD 720
GKRTGVYG +LLACY+ NEE++SIC K RPYY +
Sbjct: 452 GKRTGVYGGYLLACYNPINEEYESIC------------------------KARPYYSYDS 487
Query: 721 TISPDVWFEPTERPETSNSPASI 743
++ PDVWF+P E + SI
Sbjct: 488 SLKPDVWFDPKIVWEVKAADLSI 510
>gi|323454505|gb|EGB10375.1| hypothetical protein AURANDRAFT_36790 [Aureococcus anophagefferens]
Length = 786
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/576 (41%), Positives = 348/576 (60%), Gaps = 32/576 (5%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W VP+ ++ VF+ I T R+ I V ++L VM P DL V+L NK+AP
Sbjct: 132 WADAGCVPYAAIAAVFEKIEATTKRLEIQGHVRDLLGQVMRHAPGDLTACVFLLCNKVAP 191
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ---SMMRKPD 301
A E LE+GIGD+ ++KA+A A G+ HVK +Y++ GDLG+VA+ +R Q S KP
Sbjct: 192 AFENLEMGIGDSLLMKAVAHAFGKNAKHVKGEYEKQGDLGIVAEDARKKQKTLSFGAKPK 251
Query: 302 PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQ 361
PL KV +R I +G SQ+ K R++ L+ AAT E +Y+ R LQ KLRIGLAE
Sbjct: 252 PLLAAKVLAAYREICAISGSKSQDAKIGRMQKLMTAATPVEARYVTRGLQGKLRIGLAES 311
Query: 362 TLLAALGQAA------------VYNEQHSKPPPNIQSPLEEAAK-----IVKQVFSVLPV 404
++L L AA +++ PP+ L++A +VKQ ++ P
Sbjct: 312 SVLVGLAHAAELWPTAAADAREDAAFANAEAPPDAHESLDDARAAAADAVVKQCYAEAPS 371
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y + +L+ +W L C+ G+P+ PMLAKPTK V E++ + + TCE+KYDGE
Sbjct: 372 YATLCEGILSRPLWALPEACALAVGVPVFPMLAKPTKSVGEVLKRLGGIAITCEHKYDGE 431
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKP-SVRSFVLDCEIVAYDREKQK 523
R Q H L +G V+++SRN + T K+P+V V + +SFVLD E+VA D + +
Sbjct: 432 RFQAHMLPNGDVKVFSRNLQETTKKWPEVQAVVRAAAEARGTKSFVLDAEVVAIDVKTGQ 491
Query: 524 ILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG 583
+LPFQ LSTR +K S+ D+ VDV + AFD+L+ +G+ LL++ L+ RR + F
Sbjct: 492 LLPFQRLSTR-KKEASVEDVTVDVIVMAFDLLFLDGESLLRKSLKERRAAMRGGFAPAEH 550
Query: 584 FFQFATTL---TSID----LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLK 636
F FA + S D + IQ L+A++ A EGL++KT++ +ATYEPSKRSLNWLK
Sbjct: 551 KFAFADAVDVPASCDECDAAEHIQHALEASIVAKSEGLMVKTLEANATYEPSKRSLNWLK 610
Query: 637 LKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
LKKDY++ +GDSLDLV + A+ GRGKRTGV+GA+L AC D++ + QS+CKIGTGFS+
Sbjct: 611 LKKDYLDGVGDSLDLVVVGAYMGRGKRTGVFGAYLCACLDADTGDLQSVCKIGTGFSDED 670
Query: 697 LEERSSSLRSKVIP-KPRPYYRFADTISPDV-WFEP 730
L+ + R+ V+P KPR + + D + D+ W EP
Sbjct: 671 LKTLDAQARAMVLPAKPR-HVKCGDALEHDITWIEP 705
>gi|443918397|gb|ELU38877.1| DNA ligase I [Rhizoctonia solani AG-1 IA]
Length = 1084
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/622 (40%), Positives = 362/622 (58%), Gaps = 57/622 (9%)
Query: 158 EKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVC 217
+++A + + L K K +F W+ GE VP+ L+ F +I T R+ IT I+
Sbjct: 394 KEVASKTAELALAKMKDVDFG------WKDGETVPYAALAQAFSLIEATTKRLEITAILT 447
Query: 218 NMLRTVME-------------------TTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
L V+ + +D++ VYL N++AP + G+ELGIG++ +
Sbjct: 448 AFLTLVIRRATAKPTTKTQSKDKEPVTSGHQDVLQCVYLCINRLAPDYTGIELGIGESLL 507
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKE 318
+KA+ E+ GR +K + + GDLGLVA SR+ Q + KP PLT+ VF + IA+
Sbjct: 508 VKAIGESTGRKIDAIKDELKREGDLGLVAMNSRAMQKTLWKPKPLTLPAVFKSLLEIAQS 567
Query: 319 AGKDSQEKKKNRIKALLVAA--TDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV---- 372
G SQ KK I LL A E +Y+IR L+ KLRI LAE+T+L AL QA V
Sbjct: 568 TGHSSQNKKIGIITKLLAACLPDHAEAKYIIRSLEGKLRIRLAERTVLVALAQACVLAAN 627
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
Y + ++ + +E +I+K V+S +P Y+ ++PALL G+ +L TC TPGIP+
Sbjct: 628 YEDVEKWSKEDLGAKCDEGVEILKAVYSEIPSYDIVIPALLMGGMDSLRETCKLTPGIPL 687
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA--------------------QIHYLE 472
PMLAKPTK + E+++KF++ +FTCEYKYDGERA Q+H LE
Sbjct: 688 KPMLAKPTKAIGEVLDKFENTKFTCEYKYDGERAQVNLCLGRGIWKKTNQIDETQVHRLE 747
Query: 473 DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLST 532
DG+V ++SRN+E + K+PD+V + R K S +SFVLD E VA D+ +K+LPFQ LS
Sbjct: 748 DGTVAVFSRNSEDMSKKYPDLVEQLPRCFKESTKSFVLDAEAVAIDKTTKKLLPFQELSK 807
Query: 533 RARKNVS---LSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT 589
R RK+V L + I + + Q LL++ L RR+ L + F E F FA
Sbjct: 808 RKRKDVKRYVLGPVPNLDLIGSDRLTSVITQSLLRKTLEERRKLLREHFTEVDCEFAFAK 867
Query: 590 TLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDS 648
+EIQ FL+ +V CEGL++KT+ DA+ YEPS+RS+NWLK+ +Y+ IGDS
Sbjct: 868 ASDGETTEEIQVFLEESVKDGCEGLMVKTLTGDASRYEPSRRSVNWLKV-GNYLAGIGDS 926
Query: 649 LDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
LDLV + A++G+GKRT VYGAFLLACYD + EE+Q+ICKIGTGFS+ L + L+
Sbjct: 927 LDLVVVGAYYGKGKRTKVYGAFLLACYDPDAEEYQTICKIGTGFSDEALAAHYAQLQPLE 986
Query: 709 IPKPRPYYRFADTISPDVWFEP 730
PKP + PD+WFEP
Sbjct: 987 QPKPWGNVKIGGA-KPDIWFEP 1007
>gi|334183682|ref|NP_176845.2| DNA ligase 6 [Arabidopsis thaliana]
gi|332196428|gb|AEE34549.1| DNA ligase 6 [Arabidopsis thaliana]
Length = 1396
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/575 (41%), Positives = 356/575 (61%), Gaps = 24/575 (4%)
Query: 176 EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
++ PK ACW +G+ P+I L F + +E G+I ++CNM R++ +PED++P V
Sbjct: 750 KYQPKEHACWREGQPAPYIHLVRTFASVESEKGKIKAMSMLCNMFRSLFALSPEDVLPAV 809
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL NKIA HE +EL IG + I AL EACG + S V+ Y +GDLG VA+ R +Q
Sbjct: 810 YLCTNKIAADHENIELNIGGSLISSALEEACGISRSTVRDMYNSLGDLGDVAQLCRQTQK 869
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
++ P PL + VF T R I+ + G S KKN I L+ + + E ++L+R L LR
Sbjct: 870 LLVPPPPLLVRDVFSTLRKISVQTGTGSTRLKKNLIVKLMRSCREKEIKFLVRTLARNLR 929
Query: 356 IGLAEQTLLAALGQAAVYN---EQHSK--PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVP 410
IG +T+L ALG+A V N H+K + LE + V + +++LP + +VP
Sbjct: 930 IGAMLRTVLPALGRAIVMNSFWNDHNKELSESCFREKLEGVSAAVVEAYNILPSLDVVVP 989
Query: 411 ALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY 470
+L+ + ++T S PGIPI PMLAK KGV E N Q+ FTCEYKYDG+RAQIH
Sbjct: 990 SLMDKDIEFSTSTLSMVPGIPIKPMLAKIAKGVQEFFNLSQEKAFTCEYKYDGQRAQIHK 1049
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR-EKQKILPFQT 529
L DG+V I+SRN + T +FPD+V + + P+ +F+LD E+VA DR K++ FQ
Sbjct: 1050 LLDGTVCIFSRNGDETTSRFPDLVDVIKQFSCPAAETFMLDAEVVATDRINGNKLMSFQE 1109
Query: 530 LSTRARKN----VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF-EEEPGF 584
LSTR R + ++ IKV+VC++ FDI++ NG+ LL LR RR L + F E PG+
Sbjct: 1110 LSTRERGSKDALITTESIKVEVCVFVFDIMFVNGEQLLALPLRERRRRLKEVFPETRPGY 1169
Query: 585 FQFATTLT------SID----LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNW 634
++A +T S++ L I FL+ A +SCEG+++K++D +A Y P+KRS +W
Sbjct: 1170 LEYAKEITVGAEEASLNNHDTLSRINAFLEEAFQSSCEGIMVKSLDVNAGYCPTKRSDSW 1229
Query: 635 LKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
LK+K+DY++ +GD+LDLVPI A++G G++ G Y FL+AC++ EEFQS+C++ +GFS+
Sbjct: 1230 LKVKRDYVDGLGDTLDLVPIGAWYGNGRKAGWYSPFLMACFNPETEEFQSVCRVMSGFSD 1289
Query: 695 AM-LEERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
A +E + K++ K PYYR +T PD+WF
Sbjct: 1290 AFYIEMKEFYSEDKILAKKPPYYRTGET--PDMWF 1322
>gi|313216156|emb|CBY37517.1| unnamed protein product [Oikopleura dioica]
Length = 951
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/571 (42%), Positives = 353/571 (61%), Gaps = 42/571 (7%)
Query: 173 KAGEFDPKMV-------ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVME 225
K G+++P + ACW++G+ VP+ L +GR+ T+ + N R+V+
Sbjct: 335 KEGDYNPTLASYHAINNACWKEGKPVPYAALCQTLKCCEETSGRLNKTEYLANFYRSVIA 394
Query: 226 -TTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLG 284
T EDL+ V+++ N +A +EG+ELGIGD +IKA+++A GRT + +K Q MGDLG
Sbjct: 395 LNTAEDLLTAVHMSLNLLAATYEGVELGIGDMVLIKAISQATGRTNAKIKADMQSMGDLG 454
Query: 285 LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQ 344
VA+ S+ SQ +M KP PL + KV+ + +AK +G SQ K + IK LLVA E +
Sbjct: 455 EVAENSKGSQKLMFKPPPLKMEKVYGQLQKVAKVSGNSSQNTKVDLIKGLLVACVGPEAR 514
Query: 345 YLIRLLQSKLRIGLAEQTLLAALGQAAVYNE-QHSKPPPNIQSPLEEAAKIVKQVFSVLP 403
+LIR KLRIG++E T+L+AL +A V++E +K + + VK+ + LP
Sbjct: 515 FLIRSCAGKLRIGVSESTVLSALARAIVFHELGETKKGKFTKERYDIVEAKVKEAYCELP 574
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF-QDMEFTCEYKYD 462
Y+ I+ ALLT G NL+ S PG+P+ PMLA PTK ++EI+ +F EFT EYKYD
Sbjct: 575 NYKIIIDALLTHGSENLAEHVSLQPGVPLKPMLAHPTKAITEILTRFGAGAEFTAEYKYD 634
Query: 463 GERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKK--PSVRSFVLDCEIVAYDRE 520
GERAQIH LEDGS +YSRN E NT K+PDV +SR+ +V S V+D E VA+D
Sbjct: 635 GERAQIHLLEDGSFRVYSRNQEDNTSKYPDV---MSRMPNCINNVTSAVIDSESVAWDPA 691
Query: 521 KQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEE 580
++ILPFQ L+TR RK+ S L+++ LR RRE L+ F+
Sbjct: 692 TKQILPFQVLTTRKRKDAS----------------------LVKKSLRERRELLHTHFKS 729
Query: 581 EPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKD 640
G F FAT ++DE+Q FLD AV S EGL++K ++ +YE SKRS +WLKLKKD
Sbjct: 730 IEGEFVFATARDMSEIDELQVFLDQAVKDSTEGLMVKALED--SYEISKRSHSWLKLKKD 787
Query: 641 YIES-IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
Y+ S + DS+D++ + A++G+GKR+G YG FLL +D++NEE+Q++CK+GTG ++ L+
Sbjct: 788 YLGSGVADSVDVLVMGAYYGKGKRSGNYGGFLLGVFDADNEEYQTVCKLGTGLTDENLKL 847
Query: 700 RSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
+ L K+ + + YYR +S DV+FEP
Sbjct: 848 FTERL-DKIKSEKKSYYRLG-GVSADVYFEP 876
>gi|385305950|gb|EIF49892.1| dna ligase [Dekkera bruxellensis AWRI1499]
Length = 714
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 250/599 (41%), Positives = 365/599 (60%), Gaps = 57/599 (9%)
Query: 191 VPFIFLSLVFDMISNETGRI----LITDIVCNMLR-TVMETT-------PEDLVPVVYLA 238
+P+ L VF+ + E+GR+ + ++ C++LR + E T ++L+ V YL
Sbjct: 110 IPYATLCXVFEKLEQESGRLKNLAIASEFFCDILRKSSSEKTLXADGAVAKNLIEVTYLM 169
Query: 239 ANKIAPAHE-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM 297
N++ P +E LELG+G+ ++KALA++ GR H++K Y +GD+G VA SR+ QS++
Sbjct: 170 INRLGPDYEPDLELGLGETLLLKALAQSTGRELQHIRKDYHRLGDIGEVAFISRTKQSLI 229
Query: 298 RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIG 357
KP PL+I +VF IAK G SQ KK I +L A D E ++L+R L+ KLRI
Sbjct: 230 FKPKPLSIPEVFQNLTKIAKSMGNSSQSKKIAIINKMLAACEDQEAKFLMRSLEGKLRIN 289
Query: 358 LAEQTLLAALGQAAVYNEQHSKPPPNIQ-SPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
E+++L L +A V E K ++ L +A + +K+ +S P YE I+ + G
Sbjct: 290 FGEKSVLMGLAKAFVEYETGEKSSDDVDPEALVKAEQQMKEAYSETPNYELIIKNCIKYG 349
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
V ++S C+ PGIP+ PMLA+PTK ++EI++ + EFTCEYKYDGERAQ+H L DG +
Sbjct: 350 VSHVSEHCTLKPGIPVKPMLARPTKSIAEIMDTMEGKEFTCEYKYDGERAQVHLLPDGDM 409
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKK--PSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
+YSRN+E T ++PD++ + L+K P ++S +LD E VA+D E+ KILPFQTLSTR
Sbjct: 410 RVYSRNSENMTERYPDLIPVIEELRKENPEIKSLILDSECVAWDTEEHKILPFQTLSTRK 469
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI 594
RK V DIKV VC++ FD+L+ NG+P++ + L RRE L+ E P +FAT + S
Sbjct: 470 RKGVQEKDIKVKVCLFVFDLLFYNGEPIINKPLDQRRELLFKHIHEVPEKLRFATKMNST 529
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
D+ E++KFLD +V SCEGL+IK + DA Y P+KRS NWLKLKKDY+E +GDSLDLV
Sbjct: 530 DVKEMEKFLDESVHDSCEGLMIKALHGEDACYRPAKRSKNWLKLKKDYLEGVGDSLDLVV 589
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR 713
I TG E++S+CKIGTGFSE +L + + L+ K I +P+
Sbjct: 590 ID--------TG---------------EYESVCKIGTGFSEDLLMDLAKQLKPKEISEPK 626
Query: 714 PYY---RFADTISPDVWFEPTERPETSNSPASIVYDSQITCLPSS--YMPFSRSYFRFG 767
++ R +PDVWFEP S+V++ ++ L +S YM + SYF G
Sbjct: 627 SFFVYNRENPNATPDVWFEP-----------SLVFEVRVADLTTSPIYMSGA-SYFGDG 673
>gi|410493561|ref|YP_006908759.1| putative ATP-dependent DNA ligase [Abalone herpesvirus
Victoria/AUS/2009]
gi|408776091|gb|AFU90119.1| putative ATP-dependent DNA ligase [Abalone herpesvirus
Victoria/AUS/2009]
Length = 629
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/531 (42%), Positives = 334/531 (62%), Gaps = 10/531 (1%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I N GR + ++ + L T+M + ++ V N++APAHE +ELG G+A +IKA+
Sbjct: 16 IENAHGRNEMIKLLQDYLHTLMTEDYDSVLAVANFTLNRVAPAHENIELGAGEALVIKAV 75
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKD 322
+E G T + +++ ++ GDLG VA+ + Q+ + +T+ +V + +A GKD
Sbjct: 76 SEVTGLTPTEIRRLKKDCGDLGEVAQLASKFQT----GELITVKEVMEKMYEMATTQGKD 131
Query: 323 SQEKKKNRIKALLV-AATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPP 381
SQ+ + + LL T E +Y+ R K+R GLAE +++ ALGQA E
Sbjct: 132 SQKARIAILGDLLKRCGTKVEARYVARFCLGKMRTGLAELSVVEALGQALYRWE----TG 187
Query: 382 PNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG-VWNLSNTCSFTPGIPIGPMLAKPT 440
++Q ++E A +VK F+++P KI+ A+ +G ++NL+ +C GIP+ PMLA PT
Sbjct: 188 DSVQKKMKEGAGVVKTAFTLVPDMGKILRAVKNEGGMYNLTKSCESAAGIPMKPMLATPT 247
Query: 441 KGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRL 500
G+ ++++K + F+CEYKYDGERAQIHY+E G + I+SRN+E NT K+PD++ + +
Sbjct: 248 TGIEDVMSKLKGAVFSCEYKYDGERAQIHYMEGGKIRIFSRNSENNTEKYPDIINRLPQS 307
Query: 501 KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQ 560
V+SF+LD E VA+D EK++ILPFQ L+TR RK+V +I V VC++AFD+LY NG
Sbjct: 308 INEGVKSFILDAEAVAWDVEKKQILPFQKLATRKRKDVKEEEITVQVCVFAFDVLYMNGV 367
Query: 561 PLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD 620
+ + R RRE + F E G F FA + S ++IQ F++ AV CEGL+IKT+D
Sbjct: 368 SQVNKSFRERRELMRSCFTEVEGQFIFARDMMSNKPEDIQTFMNKAVKEDCEGLMIKTLD 427
Query: 621 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNE 680
+ATYE +KRS +WLKLKKDY+E + D+LDLV I F+G GKRTG YGAFLLACY+ +N+
Sbjct: 428 VNATYEIAKRSRSWLKLKKDYMEGVCDTLDLVVIGGFNGVGKRTGTYGAFLLACYNPDNQ 487
Query: 681 EFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
++SICKIGTGFS+ L + L + Y T+ PD WF P+
Sbjct: 488 MYESICKIGTGFSDEDLINQHKLLSEVRREGAQENYLVGSTMKPDQWFLPS 538
>gi|12597768|gb|AAG60081.1|AC013288_15 DNA ligase I, putative [Arabidopsis thaliana]
Length = 1417
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/596 (40%), Positives = 359/596 (60%), Gaps = 45/596 (7%)
Query: 176 EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
++ PK ACW +G+ P+I L F + +E G+I ++CNM R++ +PED++P V
Sbjct: 750 KYQPKEHACWREGQPAPYIHLVRTFASVESEKGKIKAMSMLCNMFRSLFALSPEDVLPAV 809
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL NKIA HE +EL IG + I AL EACG + S V+ Y +GDLG VA+ R +Q
Sbjct: 810 YLCTNKIAADHENIELNIGGSLISSALEEACGISRSTVRDMYNSLGDLGDVAQLCRQTQK 869
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
++ P PL + VF T R I+ + G S KKN I L+ + + E ++L+R L LR
Sbjct: 870 LLVPPPPLLVRDVFSTLRKISVQTGTGSTRLKKNLIVKLMRSCREKEIKFLVRTLARNLR 929
Query: 356 IGLAEQTLLAALGQAAVYN---EQHSK--PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVP 410
IG +T+L ALG+A V N H+K + LE + V + +++LP + +VP
Sbjct: 930 IGAMLRTVLPALGRAIVMNSFWNDHNKELSESCFREKLEGVSAAVVEAYNILPSLDVVVP 989
Query: 411 ALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY 470
+L+ + ++T S PGIPI PMLAK KGV E N Q+ FTCEYKYDG+RAQIH
Sbjct: 990 SLMDKDIEFSTSTLSMVPGIPIKPMLAKIAKGVQEFFNLSQEKAFTCEYKYDGQRAQIHK 1049
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR-EKQKILPFQT 529
L DG+V I+SRN + T +FPD+V + + P+ +F+LD E+VA DR K++ FQ
Sbjct: 1050 LLDGTVCIFSRNGDETTSRFPDLVDVIKQFSCPAAETFMLDAEVVATDRINGNKLMSFQE 1109
Query: 530 LSTRARKN----VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF-EEEPGF 584
LSTR R + ++ IKV+VC++ FDI++ NG+ LL LR RR L + F E PG+
Sbjct: 1110 LSTRERGSKDALITTESIKVEVCVFVFDIMFVNGEQLLALPLRERRRRLKEVFPETRPGY 1169
Query: 585 FQFATTLT----------SID----LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKR 630
++A +T S++ L I FL+ A +SCEG+++K++D +A Y P+KR
Sbjct: 1170 LEYAKEITVSATVGAEEASLNNHDTLSRINAFLEEAFQSSCEGIMVKSLDVNAGYCPTKR 1229
Query: 631 SLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGT 690
S +WLK+K+DY++ +GD+LDLVPI A++G G++ G Y FL+AC++ EEFQS+C++ +
Sbjct: 1230 SDSWLKVKRDYVDGLGDTLDLVPIGAWYGNGRKAGWYSPFLMACFNPETEEFQSVCRVMS 1289
Query: 691 GFSEAMLEE--RSSSL----------------RSKVIPKPRPYYRFADTISPDVWF 728
GFS+A E +SS+L K++ K PYYR +T PD+WF
Sbjct: 1290 GFSDAFYIEVMKSSTLTLLFNDETDGMKEFYSEDKILAKKPPYYRTGET--PDMWF 1343
>gi|118379613|ref|XP_001022972.1| DNA ligase I [Tetrahymena thermophila]
gi|89304739|gb|EAS02727.1| DNA ligase I [Tetrahymena thermophila SB210]
Length = 816
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/584 (39%), Positives = 353/584 (60%), Gaps = 40/584 (6%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGR---ILITDIVCNMLRTVMETTPEDLVP 233
FDP A + K + V F +L F+ ++ + G+ + +I+ + ++++ P+ +
Sbjct: 169 FDPIEDAPFYKDQEVLFGYLCDGFERVNEQEGKNSKAIQIEIMSKIFKSIILLNPDQVYE 228
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS 293
KIAP +E ELG+G + KA++ CG++ + ++ ++GDLG VA ++S+
Sbjct: 229 AYMFCILKIAPDYESNELGVGREILQKAISNCCGKSVTQIRDSLNKLGDLGKVASEAKST 288
Query: 294 QSMM---------RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQ 344
Q + KP P+T+ + F+ + IA +GKDS +++ I + A E
Sbjct: 289 QKNITNYFQKQAKEKP-PITLNRTFNDLKSIAAASGKDSTAERERIIIKYMNEAKPDEAC 347
Query: 345 YLIRLLQSKLRIGLAEQTLLAALGQA-----------AVYNEQHSKPPPNIQSPLEEAAK 393
Y IR L+ L+IG AE+T+ AAL +A VY EQ ++ LEE
Sbjct: 348 YFIRFLEQNLKIGAAEKTMQAALSKAFFEIAHNIKSNHVYTEQQNQL-------LEEFNF 400
Query: 394 IVKQVFSVLPVYEKIVPALLTDG--VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ 451
+ + P Y +++ L G + L + C T G+P PMLAKPTK + I+ +F+
Sbjct: 401 NITRCLCEFPNYYQVIETLKQIGKDISKLLDICKITIGVPCKPMLAKPTKSIQVILERFK 460
Query: 452 DMEFTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKFPDVVLAVSRL--KKPSVRSF 508
DM FTCEYKYDG R QIHY DG V I+SRN E T +PD+V + + + +V++F
Sbjct: 461 DMTFTCEYKYDGLRGQIHY--DGKDVTIFSRNLENMTQMYPDIVEFIKKHVSQSKTVKNF 518
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
+LD EIVA+D+ KI PFQ L+TR R NV L +I + VC++ FD++Y N Q LLQ L+
Sbjct: 519 ILDSEIVAFDKNTNKIRPFQQLATRGRVNVKLDEIDIKVCVFMFDLIYINDQSLLQTTLQ 578
Query: 569 VRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPS 628
RR+ + + F +EPG F FA + + D+++IQ+FL+ +V CEGL++KT++ ++TYEP+
Sbjct: 579 ERRQKIQECFVQEPGEFCFAEHINTEDVEQIQEFLEKSVKVGCEGLMVKTLETNSTYEPA 638
Query: 629 KRSLNWLKLKKDYIES-IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
KRS WLKLKKDY++S +GD+LDLVPIAAF G GKR G+YGA+LLACY+ + E +++ICK
Sbjct: 639 KRSFKWLKLKKDYLDSGLGDTLDLVPIAAFKGTGKRVGLYGAYLLACYNEDMERYETICK 698
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
IGTGFS+ +LE + K+IP+P+ Y D DVWF+P+
Sbjct: 699 IGTGFSDEILEACYKFFQDKIIPQPQSDYLTKD-FKADVWFKPS 741
>gi|297838379|ref|XP_002887071.1| ATP dependent DNA ligase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332912|gb|EFH63330.1| ATP dependent DNA ligase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1413
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 249/614 (40%), Positives = 365/614 (59%), Gaps = 40/614 (6%)
Query: 149 VNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETG 208
VN+ S+ E+I + N V L + ++ PK ACW G+ P+I L F + +E G
Sbjct: 732 VNICVQSSAEEIVD--KNYVSLPPE--QYKPKEHACWRDGQPAPYIHLVRTFASVESEKG 787
Query: 209 RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR 268
+I ++CNM R+++ +PED++P VYL NKI+ HE ++L IG + I AL EACG
Sbjct: 788 KIKAMSMLCNMFRSLLALSPEDVLPAVYLCTNKISADHENIDLNIGGSLISSALEEACGI 847
Query: 269 TESHVKKQYQEMGDLGL------------VAKASRSSQSMMRKPDPLTITKVFDTFRLIA 316
+ V+ Y GDLG VA+ R +Q ++ P PL I VF T R I+
Sbjct: 848 SRPTVRDMYNSTGDLGKEKSIPSQLTYGDVAQLCRQTQKLLVPPPPLLIRDVFSTLRKIS 907
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE- 375
++G S +KKN I L+ + + E ++L+R L LRIG +T+L ALG+A V N
Sbjct: 908 VQSGTGSTRQKKNLIVKLMRSCREKEIKFLVRTLVRNLRIGAMLRTVLPALGRAIVMNSF 967
Query: 376 --QHSKPPPN--IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIP 431
H+K + LE + V + +++LP + +VP+L+ + ++T S PGIP
Sbjct: 968 WSCHNKELSENCFREKLEGVSAAVVEAYNILPSLDVVVPSLMDKDIEFSTSTLSMVPGIP 1027
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFP 491
I PMLAK KGV E FQD FTCEYKYDG+RAQIH L DG+V I+SRN + T +FP
Sbjct: 1028 IKPMLAKIAKGVEEFFELFQDKAFTCEYKYDGQRAQIHKLLDGTVRIFSRNGDETTARFP 1087
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREK-QKILPFQTLSTRARKN----VSLSDIKVD 546
D+V + + P +F+LD E+VA DR+ K + FQ LSTR R + V+ IKV+
Sbjct: 1088 DLVDVIKQFSCPVAETFMLDAEVVAIDRKNGSKFMSFQELSTRERGSKDALVTTESIKVE 1147
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEE-EPGFFQFATTLT------SID---- 595
VC++ FDI++ NG+ LL LR RR L + F E PG+ ++A +T S++
Sbjct: 1148 VCVFVFDIMFGNGEQLLALPLRERRRRLKEVFPEIRPGYLEYAKEITVEAEEASLNNQDT 1207
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
L I FL A +SCEG+++K++D DA Y P+KR +WLK+K+DY++ +GD+LDLVPI
Sbjct: 1208 LSRINAFLGEAFQSSCEGIMVKSLDIDAGYFPTKRYDSWLKVKRDYVDGLGDTLDLVPIG 1267
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM-LEERSSSLRSKVIPKPRP 714
A+HG G++ G Y L+AC++ EEFQS+C++ +GFS+A +E + K++ K P
Sbjct: 1268 AWHGNGRKAGWYSPLLMACFNPETEEFQSVCRVMSGFSDAFYIEMKELYSGDKILTKKPP 1327
Query: 715 YYRFADTISPDVWF 728
YYR +T PD+WF
Sbjct: 1328 YYRTGET--PDMWF 1339
>gi|403332025|gb|EJY64998.1| DNA ligase 1 [Oxytricha trifallax]
Length = 851
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/588 (39%), Positives = 349/588 (59%), Gaps = 41/588 (6%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVF---DMISNETGRILITDIVCNMLRTVMETTPEDLVP 233
++P A + KG+ VPF F++ ++ + + I +IV N+ R+ M +P +
Sbjct: 195 YNPIEDAPFHKGQAVPFGFIARALSEIEICKGKNSKDAIKEIVANIFRSTMLLSPHETAD 254
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS 293
+ Y K+ P ++ E GIG + A+A+ACG++ +++Q+++ GD G+V + +
Sbjct: 255 LFYFFCVKLGPDYDSPETGIGLELLSNAVAKACGKSLKQIREQFKQDGDYGIVVEKGKGV 314
Query: 294 Q----SMMRKPD-----PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQ 344
Q + +K D PLT VF F I + +G +SQ +K+ I LL AT+ E +
Sbjct: 315 QKSLGTFFKKQDEAKKAPLTFRTVFQAFLKIGRTSGNNSQTEKEQIILKLLQDATNEEAK 374
Query: 345 YLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKI---------- 394
Y++R LQ L+ G AE+T ++AL +A VY PPN + + + KI
Sbjct: 375 YIVRWLQKNLKTGAAEKTFISALARAIVYT------PPNSKGKVLNSKKILGEAQFAEKC 428
Query: 395 ------VKQVFSVLPVYEKIVPALLT--DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEI 446
+ + P Y I+ LL D + L C T GIP+ PMLAKPTKG+ E+
Sbjct: 429 AQIEMGIGEAICEFPNYGLIIETLLEVGDDMVKLKEKCHITVGIPVKPMLAKPTKGIREV 488
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLED---GSVEIYSRNAERNTGKFPDVVLAVSRLKKP 503
+++F+ ++FTCEYKYDG R QIH+ + V+IYSRN E TG++PD+V VS+
Sbjct: 489 LDRFEQVKFTCEYKYDGFRGQIHFNRNDPINKVKIYSRNLEDMTGQYPDIVDFVSQSPNE 548
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLL 563
V +++LD E+VA+D +ILPFQTL+ R+RKNV+ D+K +CI AFD+LY NGQ LL
Sbjct: 549 GVDNYILDSELVAFDHVNNRILPFQTLTQRSRKNVTEEDLKTRICICAFDLLYLNGQSLL 608
Query: 564 QEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDA 623
+E RRE L+ + E F FA + ++ I++FL ++ SCEGL+IKT+D +A
Sbjct: 609 KEPFIKRREILHQNLHEVQNSFVFAKFKDAEAIEAIEEFLADSIKDSCEGLMIKTLDTNA 668
Query: 624 TYEPSKRSLNWLKLKKDYIES-IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
TYEPSKRSLNWLKLKKDYI++ +GDSLDLV + A G+GKRTG+YG+FLLACYD N E
Sbjct: 669 TYEPSKRSLNWLKLKKDYIDTGLGDSLDLVVVGADFGKGKRTGMYGSFLLACYDENLEVL 728
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
Q++ K+ TG S+ ML + L+ I KP ++ + + DVW P
Sbjct: 729 QTVTKMATGLSDEMLAKIYEQLKDLEINKPPSNLKYKEK-NVDVWIMP 775
>gi|302780581|ref|XP_002972065.1| hypothetical protein SELMODRAFT_96808 [Selaginella moellendorffii]
gi|300160364|gb|EFJ26982.1| hypothetical protein SELMODRAFT_96808 [Selaginella moellendorffii]
Length = 610
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/569 (39%), Positives = 344/569 (60%), Gaps = 26/569 (4%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ E P++ L+ F+++ E+GR T+++CNM R+++ + D++ +YL N+IAP
Sbjct: 1 WKADELAPYLHLARTFELVEKESGRNRTTEMLCNMFRSLLALSSADVLAALYLTTNRIAP 60
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+E ++L IG A+++ A+ EA G +S +K+ Y MGDLG VA+A + +QSM+R P PL
Sbjct: 61 DYENVDLSIGTATVVMAIEEATGTPKSKLKEMYNRMGDLGDVAQACKQTQSMLRNPQPLL 120
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I VF T + I+KE G S +KKN + LL + + E YL+R L +RIG +T+L
Sbjct: 121 IRHVFSTLKQISKETGIGSSSRKKNMVVGLLRSCREKEVTYLVRTLVQNMRIGAMVRTVL 180
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
AL +A V + +S +E + ++ + F+++P ++ +VP LL G+ L+
Sbjct: 181 PALAEAVVLHRDNSAVAALKH---QEVSALIVEAFNLVPNFDILVPFLLEQGMVALATRM 237
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
TPGIPI PMLAK GV +++ F+ FT E+KYDG RAQIH L+DGSV I+SRN E
Sbjct: 238 VLTPGIPIKPMLAKIANGVPDVLKIFEGKSFTSEFKYDGFRAQIHLLDDGSVRIFSRNCE 297
Query: 485 RNTGKFPDVV--LAVSRLKKPSVRSFVLDCEIVAYDR-EKQKILPFQTLSTRAR-----K 536
+T +FPDVV + S +K+ S RSF++D E+VA DR K++ FQ+LSTR R
Sbjct: 298 NSTSRFPDVVEIIKSSTIKRDS-RSFIIDAELVAVDRANNNKLMAFQSLSTRERGGRTGT 356
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF-EEEPGFFQFATTLTSID 595
V L I V+VC++ FD++Y +G+PL++ LR+RR ++D F E PG+ FA T +
Sbjct: 357 GVDLDKITVNVCVFVFDVMYVDGEPLVKAPLRLRRRRMHDLFPEVRPGYLDFAAEKTEHN 416
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+ IQ FL A+ ASCEGL++K +D + Y P+KR+ +WLKLK+DY+E + DSLDLVPI
Sbjct: 417 TEHIQDFLGQAIAASCEGLMVKALDEGSFYAPAKRAESWLKLKRDYVEGLSDSLDLVPIG 476
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQS-ICKIGTGFSEAMLEERSSSLRSKVIPKPRP 714
A++G G++ G Y FQS + K G + L + + K++ K
Sbjct: 477 AWYGNGRKAGWY---------VQRNSFQSLLIKSSAGIARFSLHA-TILINDKLLSKKPS 526
Query: 715 YYRFADTISPDVWFEPTERPETSNSPASI 743
YY+ + PDVWF + E + +I
Sbjct: 527 YYQTLE--RPDVWFAAAKVWEIRGADYTI 553
>gi|357508239|ref|XP_003624408.1| DNA ligase [Medicago truncatula]
gi|355499423|gb|AES80626.1| DNA ligase [Medicago truncatula]
Length = 1498
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/576 (38%), Positives = 342/576 (59%), Gaps = 53/576 (9%)
Query: 176 EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
+++PK ACW G+ P++ L+ F ++ +E G+I T I+CNM R+++ +PED++P V
Sbjct: 764 KYNPKEHACWRDGQPAPYLHLARTFSLLEDEKGKIKATSILCNMFRSLLVLSPEDVLPAV 823
Query: 236 YLAANKIAPAHEGL-----------------ELGIGDASIIKALAEACGRTESHVKKQYQ 278
YL NKIA HE + EL IG + + AL EACG +K+ Y
Sbjct: 824 YLCTNKIAADHENVVGLLCTNKDPCDMPLMQELNIGGSLVTTALEEACGTNRLKIKEMYN 883
Query: 279 EMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA 338
++GDLG VA+ R +Q ++ P PL I ++ R I+ + G S +KK I L+ +
Sbjct: 884 KLGDLGDVAQECRQTQRLLAPPTPLLIKDIYSALRKISVQTGNGSTLRKKGIILHLMRSC 943
Query: 339 TDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ----HSKPPPNIQSPLEEAAKI 394
+ E ++L+R L LRIG +T+L AL A V N + N+++ L+ +
Sbjct: 944 REKEMKFLVRTLVRNLRIGAMLRTVLPALAHAVVMNSRPTVYEEGTAENLKAALQVLSVA 1003
Query: 395 VKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDME 454
V + +++LP + IVP L+ G+ ++ S PGIPI PMLAK T G+ + + FQ+
Sbjct: 1004 VVEAYNILPNLDIIVPTLMNKGIEFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFQNKA 1063
Query: 455 FTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEI 514
FTCEYKYDG+RAQIH L DGSV ++SRN + +T +FPD+V + KP +F++D E+
Sbjct: 1064 FTCEYKYDGQRAQIHKLVDGSVLVFSRNGDESTSRFPDLVDMIKESCKPVASTFIIDAEV 1123
Query: 515 VAYDREKQ-KILPFQTLSTRARKN----VSLSDIKVDVCIYAFDILYRNGQPL---LQEQ 566
V DR+ +I+ FQ LS+R R V+ IKV +CI+ FDI++ NG+ L L+
Sbjct: 1124 VGIDRKNGCRIMSFQELSSRGRGGKDTLVTKESIKVGICIFVFDIMFANGEHLADPLKYC 1183
Query: 567 LRVR------REHLYDS------FEEEPGFFQFATTLTSIDLDE-----------IQKFL 603
L+V + +Y S ++E PG+F++A TSI+ D+ I FL
Sbjct: 1184 LQVTGFPSPPKTKVYASDLKALFYDERPGYFEYAKE-TSIEADDACLTCEATLTRINAFL 1242
Query: 604 DAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
+ A+ +SCEG+++KT+D DA Y PSKRS WLK+K+DY+E + D+LDLVPI A+HG G++
Sbjct: 1243 EDALHSSCEGIMVKTLDIDAGYSPSKRSDKWLKVKRDYVEGLNDTLDLVPIGAWHGNGRK 1302
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
G Y FL+AC++ EE+QS+C++ +GF+++ E
Sbjct: 1303 AGWYSPFLMACFNPETEEYQSVCRVMSGFTDSFYIE 1338
>gi|340508217|gb|EGR33971.1| hypothetical protein IMG5_028790 [Ichthyophthirius multifiliis]
Length = 709
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/591 (38%), Positives = 350/591 (59%), Gaps = 26/591 (4%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETG---RILITDIVCNMLRTVMETTPEDLVP 233
FD A + + E++PF FL F+++ G + + ++ + RT++ P +
Sbjct: 58 FDCLHDAPFLENEQIPFKFLCDAFEIMQECKGQNSKQQMIQVISKVFRTILLLNPSQIYQ 117
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS 293
K+AP +E ELGIG ++KA++ G+T +K E GDLG VA ++++
Sbjct: 118 AYMFCILKVAPDYEQNELGIGQEILLKAISTCSGKTPKQIKGCLNECGDLGKVASFAKAT 177
Query: 294 QSMMRK----------PDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEP 343
Q + + P+T+ +V++ + I + G+ S KK+ I + A E
Sbjct: 178 QKNISQFFIVKQQNMEKAPITLMRVYNDLKEIQQTKGESSSSKKEKIIVKFMQDAKPVEV 237
Query: 344 QYLIRLLQSKLRIGLAEQTLLAALGQA----AVYNEQHSKP--PPNIQSPLEEAAKIVKQ 397
+ IR L+ L+IG AE+T A L +A A + Q+ + + LE+ + +
Sbjct: 238 CFFIRFLEKNLKIGAAEKTFQAGLSKAFFDLAYFGSQNKNEEFSESDKIELEKFNDNITR 297
Query: 398 VFSVLPVYEKIVPAL--LTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEF 455
P Y +++ L + + L TC T GIP PMLAKPTK + I+N+F+D++F
Sbjct: 298 SLCEFPNYFQVIEKLKEVKKNIHELIQTCKVTVGIPCKPMLAKPTKSIKIILNRFKDIKF 357
Query: 456 TCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVS-RLKK-PSVRSFVLDCE 513
TCE+KYDG R QIH+ ++G V I+SRN E T +PD+V V +KK P++ SF+LD E
Sbjct: 358 TCEFKYDGLRGQIHF-QEGKVSIFSRNLENMTETYPDIVKFVQDHIKKSPNINSFILDSE 416
Query: 514 IVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREH 573
IVA+D++ +I PFQ LSTR R NV + DI + VC++ FD+LY NGQ LLQ L+ RR+
Sbjct: 417 IVAFDKQTNRIKPFQILSTRGRVNVKIEDINIRVCVFIFDLLYLNGQSLLQNTLQQRRDT 476
Query: 574 LYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLN 633
+ + F +E G FQFA + S D+++IQ+ L+ ++ CEGL++KT++ ++TYEP+KRS
Sbjct: 477 VREYFVQEEGEFQFAEHIDSQDMEQIQEMLEKSLKKGCEGLMVKTLENNSTYEPAKRSFK 536
Query: 634 WLKLKKDYIE-SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGF 692
WLKLKKDY+E +GD+LDLVPIAAF+G GKR G+YGA+LLACY+ + E ++S+CKIGTGF
Sbjct: 537 WLKLKKDYLELGLGDTLDLVPIAAFYGSGKRVGLYGAYLLACYNEDMERYESVCKIGTGF 596
Query: 693 SEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
S+ +LE + K+IP+ + Y F DVW +P E + I
Sbjct: 597 SDEVLEACYKFFQDKIIPQKQDDY-FVGDFKADVWLKPCVVWEVKGADLQI 646
>gi|222619063|gb|EEE55195.1| hypothetical protein OsJ_03041 [Oryza sativa Japonica Group]
Length = 1455
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/536 (39%), Positives = 332/536 (61%), Gaps = 34/536 (6%)
Query: 183 ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKI 242
ACW G+ P++ L+ FD++ E G+I T ++CNM R+++ +P+D++P VYL NKI
Sbjct: 763 ACWTAGQPAPYLHLARTFDLVEREKGKIKTTAMLCNMFRSLLALSPDDVLPAVYLCTNKI 822
Query: 243 APAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP 302
+P HE +E A G + S + + Y+ GDLG VA+ R +Q ++ P P
Sbjct: 823 SPDHENIE--------------ALGSSRSKIHEMYKTFGDLGDVAQECRQNQMLLAPPRP 868
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
L+I VF T R ++ AG S ++K + L+ + + E ++L+R L LRIG+ +T
Sbjct: 869 LSIRDVFSTLRKLSGIAGSGSTGRRKILVLHLIRSCREMEMKFLVRTLVRNLRIGVMMKT 928
Query: 363 LLAALGQAAVYNEQHSKPP----PNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
+L AL A V + ++S P I+ L+E + V + ++V+P + ++P+LL +
Sbjct: 929 ILPALAHAVVIDGKYSNSPVLSLEGIKPQLQELSTEVAEAYNVIPNLDLLIPSLLREDTA 988
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
+++ + G PI PMLA+ T G+++ + F FTCEYKYDG+RAQIH DGSV+I
Sbjct: 989 FSASSLAMITGTPIPPMLARITNGLTQSLKLFNGRAFTCEYKYDGQRAQIHRSNDGSVQI 1048
Query: 479 YSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK-QKILPFQTLSTRAR-- 535
+SR + +T +FPD+V + L V SF+LD E+V DR+K K++ FQ LS+R R
Sbjct: 1049 FSRQMKESTSRFPDLVGMIKELCSIEVSSFILDAEVVGIDRKKGNKLMSFQELSSRERGS 1108
Query: 536 --KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT- 592
++++ +IKVD+C++ FDI++ NGQ LL LR RR++++D F+E+PG F+ A LT
Sbjct: 1109 KHSSIAIQNIKVDICVFVFDIMFCNGQSLLNCSLRQRRKYIHDLFQEKPGHFELAQQLTV 1168
Query: 593 -----SID----LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE 643
S+D L+ + F A +SCEG+++K +D DA Y SKR +WLK+K+DY+
Sbjct: 1169 EADEASVDNSTTLERMNTFFKMACQSSCEGIMLKILDVDAGYSASKRCDSWLKVKRDYV- 1227
Query: 644 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
+GDSLDLVPI A++G G++ G Y FL+ACY+ EEFQS+C++ +GFS+ +E
Sbjct: 1228 GLGDSLDLVPIGAWYGNGRKAGWYSPFLMACYNPEYEEFQSVCRVMSGFSDEFYKE 1283
>gi|403222948|dbj|BAM41079.1| DNA ligase 1 precursor [Theileria orientalis strain Shintoku]
Length = 733
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/592 (40%), Positives = 346/592 (58%), Gaps = 29/592 (4%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVF----DMISNETG-RILITDIVCNMLRTVMETTPEDL 231
F P M C + + + F FLS V D+ G R + ++ N R ++ P D+
Sbjct: 94 FPPTM--CGKANDSILFSFLSGVLQKSDDIFCTGKGSRKSVLTLLSNFFRVLIYHNPSDV 151
Query: 232 VPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKK-----QYQEMGDLGLV 286
+P +Y+ N+I P +E +E+G+GD I+K+++EA ++E ++K ++ DLG+V
Sbjct: 152 IPSIYILLNRIYPDYENIEIGVGDHLILKSMSEAYSKSEQNIKSIMATLVLKKHEDLGIV 211
Query: 287 AK-ASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQY 345
A +S +SQ +++ PD TI+ + FR I+ GK+S KK+ IK LL+ A E +Y
Sbjct: 212 AGLSSCTSQLLVKLPDN-TISGILKQFRTISSITGKNSSNHKKDIIKKLLITAKKEEAKY 270
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNE---QHSKPPPNIQS--------PLEEAAKI 394
+IR LQ KLRIG+ T+ + A + + S+P ++++ LEE
Sbjct: 271 IIRFLQQKLRIGIGINTIFQCVADAFYLTKVGSEGSEPVGDVRTNKSVELNDTLEEMEFA 330
Query: 395 VKQVFSVLPVYEKIVPALLT-DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF--Q 451
V+ +++P +K+V LL D L C TPGIP+ PMLAKP EIV +
Sbjct: 331 VRTAITLVPNIDKVVGHLLKGDDSTQLLEHCKITPGIPVRPMLAKPVNTTDEIVQSVGGE 390
Query: 452 DMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLD 511
++ FTCEYKYDGER Q+H L D +++++SRN E K+PDVV ++ ++ ++D
Sbjct: 391 NVLFTCEYKYDGERVQLHLLRDRTIKLFSRNMENLCPKYPDVVANFAKCITDDLKECIID 450
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
CE+V D E KIL FQ LSTR RK+V +++I V VC++ FDILY NG+ L+ L RR
Sbjct: 451 CEVVPMDNE-NKILSFQCLSTRKRKDVDVNNISVKVCLFPFDILYLNGESLVTLPLSKRR 509
Query: 572 EHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRS 631
+ L+ S + + G FA LD+I FL AV SCEGL+IKT+D ATYEP RS
Sbjct: 510 DLLHSSMKPQTGLLSFAKYKNVDSLDDIDDFLKMAVQESCEGLMIKTLDDKATYEPQARS 569
Query: 632 LNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTG 691
WLK KKDYI + DS+DLVP+ AF+G+GKRT VYG+FLLA YD E +Q +CK GTG
Sbjct: 570 NKWLKFKKDYISGMSDSVDLVPMGAFYGKGKRTNVYGSFLLAVYDPIQEIYQGVCKTGTG 629
Query: 692 FSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
F++ L+E SL++ V+ Y +D + PDVWF P + E + SI
Sbjct: 630 FNDQTLKELHDSLQNNVVNSKPSNYEVSDKMVPDVWFSPEKVWECKCADLSI 681
>gi|405967039|gb|EKC32253.1| DNA ligase 1 [Crassostrea gigas]
Length = 527
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/459 (46%), Positives = 292/459 (63%), Gaps = 19/459 (4%)
Query: 171 KKKAGEFDPKMV-------ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTV 223
KK+ G +DP A W + E+VP++ L+ F+ I N +GR+ +I+ N R+V
Sbjct: 64 KKEHGGYDPAKSNYHPIEDAVWTRNEKVPYLALAKTFEAIENISGRLKTIEILSNFFRSV 123
Query: 224 METTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDL 283
+ + DLV VYL NK+APA+EGLELGIG+ ++KA+A+A GR +K QE GDL
Sbjct: 124 IALSSSDLVQCVYLCLNKLAPAYEGLELGIGETVLMKAIAQATGRGIDKIKADAQEKGDL 183
Query: 284 GLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEP 343
GLVA+ SRSSQ M P LT+ VF+ + IA +G + KK +IK + VA CE
Sbjct: 184 GLVAETSRSSQRTMFAPPKLTVPAVFNKLKEIAGMSGNAAMTKKIEKIKGMFVACRQCEA 243
Query: 344 QYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEA 391
+YLIR L KLRIGLAEQ++L ALG A + PP + + +EE
Sbjct: 244 RYLIRSLGGKLRIGLAEQSVLTALGNAVFRTPPGQEFPPEVLDAGKGMGADTLKKKMEEC 303
Query: 392 AKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ 451
++K + P Y+ I+PAL+ G+ L N C TPG+P+ PMLA PTKGVSE+ +F
Sbjct: 304 TLVIKTTYCECPNYDAIIPALIKYGIEELPNHCKLTPGVPLKPMLAHPTKGVSEVFKRFD 363
Query: 452 DMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLD 511
+ +FTCEYKYDGERAQIH LE+G V IYSRN+E NT K+PD++ + +++ SV S V+D
Sbjct: 364 EADFTCEYKYDGERAQIHILENGEVHIYSRNSENNTSKYPDIIARIPKVRNDSVTSCVID 423
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
E VA+D EK++I PFQ LS R RK+ S+IK+ VC+YAFD+LY NG+ L++E R RR
Sbjct: 424 SEAVAWDAEKKQIQPFQVLSHRKRKDADASEIKIQVCVYAFDLLYLNGKSLVKEPFRKRR 483
Query: 572 EHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
E L+ SF+E G F FA ++ S + DEI +FLD +V +
Sbjct: 484 ELLHSSFKEVEGEFVFAKSMISSNTDEIAEFLDESVKGN 522
>gi|255574286|ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis]
gi|223532518|gb|EEF34307.1| DNA ligase I, putative [Ricinus communis]
Length = 1360
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/575 (37%), Positives = 339/575 (58%), Gaps = 56/575 (9%)
Query: 176 EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
E++P ACW GE P+I L+ FD++ E G+I T I+CNM R++
Sbjct: 750 EYNPIQHACWRVGEPAPYIHLARTFDLVEAEKGKIKATSIMCNMFRSL------------ 797
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
+ A+ EACG S ++ Y +GDLG VA+ R +Q+
Sbjct: 798 ----------------------VTSAIEEACGTNRSKIRDMYNSLGDLGDVAQVFRQTQT 835
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
++ P L + VF R I+ + G S +KK+ I L+ + + E ++++R L LR
Sbjct: 836 LLAPPPHLLVKDVFCVLRKISVQTGAGSTVRKKSLIVNLMRSCREKEMKFIVRTLVRNLR 895
Query: 356 IGLAEQTLLAALGQAAVYN---EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPAL 412
IG +T+L AL QA + + + +++ L+ + V + +++LP + ++P+L
Sbjct: 896 IGAVMKTVLPALAQAVAMHSLVKSSEQKAESLKEKLQYLSAAVIEAYNILPNLDLLIPSL 955
Query: 413 LTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLE 472
++ G+ S++ S PG+PI PMLAK T GVS+++ FQD FTCEYKYDG+RAQIH L
Sbjct: 956 ISKGIDFSSSSLSMVPGVPIKPMLAKITNGVSQVLKLFQDKAFTCEYKYDGQRAQIHKLP 1015
Query: 473 DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK-QKILPFQTLS 531
+GS+ ++SRN + T +FPD++ + KP+ +F++D E+VA DR+ K++ FQ LS
Sbjct: 1016 NGSIRVFSRNGDETTSRFPDLINIIEESCKPTAVTFIVDAEVVAVDRKNGHKLMAFQELS 1075
Query: 532 TRAR----KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF-EEEPGFFQ 586
+R R +++L+ IKV +C++ FD+++ NG+ LL+ LR RR++L D F +E G+F+
Sbjct: 1076 SRERGSKDSSITLNKIKVQICVFVFDVMFANGEQLLELPLRQRRKYLKDLFGDERKGYFE 1135
Query: 587 FA--TTLTSIDLD--------EIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLK 636
+A TT+ + D +I FL+ A+ +SCEG+++KT+D A Y PSKR+ WLK
Sbjct: 1136 YAKETTVEACDASLTNDITETKINSFLENALRSSCEGIMVKTLDDHAEYSPSKRTDTWLK 1195
Query: 637 LKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
+K+DY+E + +SLDLVPI A+HG G++ G Y FL+ACY+ EEFQS+C++ +GFS+A
Sbjct: 1196 VKRDYVEELNNSLDLVPIGAWHGNGRKAGWYSPFLMACYNPETEEFQSVCRVMSGFSDAF 1255
Query: 697 LEERSSSLRSKVIPKPRP-YYRFADTISPDVWFEP 730
E I +P YYR A+ PD WF P
Sbjct: 1256 YTEMKEYFSGDRILLKKPHYYRTAEV--PDKWFSP 1288
>gi|71027867|ref|XP_763577.1| DNA ligase I [Theileria parva strain Muguga]
gi|68350530|gb|EAN31294.1| DNA ligase I, putative [Theileria parva]
Length = 858
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/612 (39%), Positives = 345/612 (56%), Gaps = 60/612 (9%)
Query: 174 AGEFDPKM---------VACWEKGERVPFIFLSLVF----DMISNETG-RILITDIVCNM 219
+ FDP + C + + F +S V D+ G R + ++ N
Sbjct: 187 SSRFDPALFDITPYFPSTMCGKPNNSILFSLVSSVLQKSDDIFCTGKGSRKSVLTLLANF 246
Query: 220 LRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVK----- 274
R ++ P D++PV YL N+I P +E +E+G+GD+ IIK+++EA ++E ++K
Sbjct: 247 YRVLIYYNPPDVIPVTYLLLNRICPEYENIEIGVGDSLIIKSMSEAYSKSEKNIKSNDNN 306
Query: 275 ----KQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNR 330
K+Y+ DLGLVA AS + ++ K TI+ VF+ FR IA GK+S KK
Sbjct: 307 NVVLKKYE---DLGLVAAASSCTSQLLFKLPENTISGVFNHFRSIAAVTGKNSNNHKKEI 363
Query: 331 IKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY---------------NE 375
IK LL+ A E +Y+IR LQ +LRIG+ T+ + A +
Sbjct: 364 IKKLLITAKKVESKYIIRSLQQRLRIGIGLNTIFQCIADAFYLTRPGTVNPVKVGENTGK 423
Query: 376 QHSKPPPNIQS-------PLEEAAKIVKQVFSVLPVYEKIVPALL-TDGVWNLSNTCSFT 427
+KP ++++ +E+ VK ++LP EK+V LL D L C T
Sbjct: 424 ALTKPIGDVRTEDTPPKYTIEDMEFSVKTAITMLPNIEKVVGHLLDNDNSEQLVEHCKIT 483
Query: 428 PGIPIGPMLAKPTKGVSEIVNKF--QDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAER 485
PGIP+ PMLAKP +EI+ ++ FTCEYKYDGER QIH L+D S++++SRN E
Sbjct: 484 PGIPVRPMLAKPVNDQAEILQALGGDNVTFTCEYKYDGERVQIHLLKDKSIKLFSRNMEN 543
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV 545
K+PDVV + KP + ++DCE+V D E KIL FQ+LSTR RK+V+ +++ V
Sbjct: 544 LMEKYPDVVEHFKKSIKPDLEECIIDCEVVPVDDE-NKILSFQSLSTRKRKDVNPNNVSV 602
Query: 546 DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDA 605
VC++ FDILY NG+ L+ E L RREHLY+ PG FA ++ I FL +
Sbjct: 603 RVCLFLFDILYLNGESLVTEPLSKRREHLYNCVNTVPGTVVFAENRNFQSIEHIDDFLKS 662
Query: 606 AVDA------SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
A+ SCEGL+IKT+D ATYEP RS W+K KKDYI + DS+DLVPI AF G
Sbjct: 663 ALQGLRYGAYSCEGLMIKTLDDKATYEPQARSNKWIKYKKDYITGLADSVDLVPIGAFFG 722
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRP-YYRF 718
+GKR V+G++LLA YD E +Q++CK GTGF++ L++ SL+ K I K +P +Y
Sbjct: 723 KGKRISVFGSYLLAVYDPMQEVYQALCKTGTGFTDQALKDLHDSLQ-KDITKTKPSFYDV 781
Query: 719 ADTISPDVWFEP 730
++ + PDVWF P
Sbjct: 782 SEKMEPDVWFLP 793
>gi|145547864|ref|XP_001459613.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427439|emb|CAK92216.1| unnamed protein product [Paramecium tetraurelia]
Length = 680
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 339/556 (60%), Gaps = 27/556 (4%)
Query: 191 VPFIFLSLVFDM---ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE 247
V FI ++ +++ I + + I ++V + +M+ E+ VP + K+ P +E
Sbjct: 59 VLFIDMAELYEQVGEIKGQNSKDAIKELVAKLFIRIMKENREEFVPAYLFSILKLGPDYE 118
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRK-------- 299
ELGIG I+K+++ G++E V++ +GDLGL + S+S+Q+ + K
Sbjct: 119 SWELGIGQGIIVKSISAVSGKSEKQVRELMNTLGDLGLAIEKSKSTQTSLNKFFVSQSVK 178
Query: 300 -PDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGL 358
LT+ +VF+T + + K+ G S +K+ + LL A E +Y+IR ++ L+IG
Sbjct: 179 EEVKLTMIQVFNTLQQLQKQEGTGSSLEKERILTGLLRMAKPIEAKYIIRFIEKNLKIGA 238
Query: 359 AEQTLLAALGQA-AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT-DG 416
AE+T+ AAL +A +Y++ N++ E I+ Q P Y+KI+ L +
Sbjct: 239 AEKTMQAALARAFQLYHK------GNVEGDYE---SIINQALCECPNYKKIIDTLFSIQS 289
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ + C PG+P PMLAKP K + I +F++M+FTCEYKYDG R QIH+ E+G V
Sbjct: 290 LKEVPELCHIIPGVPCKPMLAKPMKSIQMIFQRFENMKFTCEYKYDGLRGQIHF-ENGQV 348
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
I+SRN E T +PD+V V + F++D EIVAYD +ILPFQTL++RA+K
Sbjct: 349 SIFSRNLENMTQTYPDIVNYV-HTHYQHLDGFIIDSEIVAYDVANNRILPFQTLTSRAKK 407
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
NV + I++ VC+Y FD+LY N Q L+E L RR+ L ++F+EE G +FAT+ S +
Sbjct: 408 NVDQNQIEIQVCLYIFDLLYLNKQSYLKETLEKRRQTLRETFKEEEGKLKFATSRDSENF 467
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES-IGDSLDLVPIA 655
+EI++FL ++ CEGL+IKT++ ++ YEP+KRS NWLKLKKDY+++ + D+ DLVPI
Sbjct: 468 EEIEEFLLNSIKMGCEGLMIKTLEINSQYEPAKRSFNWLKLKKDYLDNGLSDTFDLVPIG 527
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
A +G GKR G YG++LLACY+ + +++++ CKIGTGFS+ LE+ + +IP P
Sbjct: 528 ACYGTGKRKGFYGSYLLACYNEDMDQYETTCKIGTGFSDENLEKFFQFFQEYLIPHPLSE 587
Query: 716 YRFADTISPDVWFEPT 731
Y+ D ++ DVWF P
Sbjct: 588 YK-CDGVNMDVWFSPV 602
>gi|430811313|emb|CCJ31236.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 488
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/443 (46%), Positives = 288/443 (65%), Gaps = 2/443 (0%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LT+ VF + + IA +GKDSQ KK IK LL A E +++IR L+ KLRI LAE+T
Sbjct: 2 LTVPSVFKSLKEIATTSGKDSQVKKLGIIKKLLSVANGSETKFIIRSLEGKLRIRLAEKT 61
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
++ +L V + + S L I+++VFS +P Y+ ++ ALL +G+ NL
Sbjct: 62 VIMSLAHTMVKIQAEKEGTIVTPSYLTNGENIIREVFSQVPSYDIVISALLKNGIQNLPE 121
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
C TPGIP+ PMLAKPTK +SEI ++F++ FTCEYKYDGER QIH + +G V+++SRN
Sbjct: 122 NCKLTPGIPLKPMLAKPTKTISEIFDRFENQNFTCEYKYDGERTQIHLIPNGEVKVFSRN 181
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
E + K+PD+V + ++ K + SFVLDCE VA+D + I PFQ LSTR RK+V +
Sbjct: 182 LENISNKYPDIVGVIPKIIKDGITSFVLDCESVAWDGINKVIQPFQILSTRKRKDVDIES 241
Query: 543 IKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
I+V VCI+AFD+LY NG+ L+ + R RR+ L SF+ G F F L++IQ F
Sbjct: 242 IRVKVCIFAFDLLYLNGESLIHKSFRERRDLLIQSFKPLEGEFSFVQFNDLKSLEDIQVF 301
Query: 603 LDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
L+ ++ SCEGL+IK +D ++ YEPSKRS NWLKLKKDY+ +IGDSLDLV + F+GRG
Sbjct: 302 LEKSIQDSCEGLMIKMLDGEESGYEPSKRSRNWLKLKKDYMSNIGDSLDLVVLGGFYGRG 361
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF-AD 720
KRT YGA+LL CY+ + ++SICK+GTGFS+ +LE ++ + ++ + YY A
Sbjct: 362 KRTNTYGAYLLGCYEPDKGVYESICKLGTGFSDEVLESYTTFFNNHILKHKKSYYHHSAK 421
Query: 721 TISPDVWFEPTERPETSNSPASI 743
PDVWFEP E + SI
Sbjct: 422 GEQPDVWFEPVAVWEVLAADLSI 444
>gi|380798769|gb|AFE71260.1| DNA ligase 1, partial [Macaca mulatta]
Length = 443
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/361 (53%), Positives = 263/361 (72%)
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
AV + K ++ LEE I+KQ F +P ++I+P LL G+ L C +PGI
Sbjct: 3 AVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGI 62
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
P+ PMLA PT+GVSE++ +F++ FTCEYKYDG+RAQIH LE G V+I+SRN E NTGK+
Sbjct: 63 PLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKY 122
Query: 491 PDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIY 550
PD++ + ++K PSV SF+LD E VA+DREK++I PFQ L+TR RK V S+I+V VC+Y
Sbjct: 123 PDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLY 182
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
AFD++Y NG+ L++E L RR+ L ++F E G F FAT+L + D+++I +FL+ +V S
Sbjct: 183 AFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDS 242
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
CEGL++KT+D DATYE +KRS NWLKLKKDY++ +GD+LDLV I A+ GRGKR G YG F
Sbjct: 243 CEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGF 302
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
LLA YD ++EE Q+ICK+GTGFS+ LEE SL++ V+P PRPY R ++PD W +P
Sbjct: 303 LLASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVTPDHWLDP 362
Query: 731 T 731
+
Sbjct: 363 S 363
>gi|440298254|gb|ELP90894.1| DNA ligase, putative [Entamoeba invadens IP1]
Length = 698
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/558 (40%), Positives = 336/558 (60%), Gaps = 14/558 (2%)
Query: 187 KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAH 246
K + +PF L+ FD + E+GRI T+I+ + L+TV+ T+P DL V+ L ++AP
Sbjct: 69 KAKTLPFKGLAETFDKVEKESGRIKKTEIMASYLKTVITTSPGDLADVLNLTTGQVAPTW 128
Query: 247 EGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTIT 306
EG ELGIGDA + + G S + ++ +E GD+G+VA+ ++ +QS++ KP PLT+
Sbjct: 129 EGKELGIGDAILKSVVQRVTGFKPSQLNEKIKEHGDIGIVAQMTKQNQSLLVKPQPLTVH 188
Query: 307 KVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAA 366
V F I D KK +I +++VAA E ++L+R+L+ RIG +E++L A
Sbjct: 189 GVVTKFLEILDAPNTDI---KKQKITSMIVAAVGPEIKFLLRILKGVFRIGFSERSLPNA 245
Query: 367 LGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT-DGVWNLSNTCS 425
L A ++ + +E +I+K + P ++ + ++T D + + +C
Sbjct: 246 LAIALCQIHKN-------KYDVERLTEIIKDAAARNPSFQILAKYVITEDPLDAFTTSCG 298
Query: 426 FTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAER 485
T P PMLAKP K V E+ +F FTCEYKYDGER QIHY E G ++I++RN E
Sbjct: 299 VTLFTPFKPMLAKPKKSVEEVTGRF-GFPFTCEYKYDGERGQIHYKE-GLIKIFTRNLEN 356
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV 545
T K+PDV+ AV + P V+SF++DCEIVA++RE + FQ L RA+K V++ I +
Sbjct: 357 YTEKYPDVIEAVKQSVLPEVKSFIIDCEIVAFNRETDEFQEFQILGRRAKKGVNIRSIAI 416
Query: 546 DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDA 605
+VC+ AFD+LY +G L+++ L RRE L+ F+E P F FA D+I F +
Sbjct: 417 NVCVNAFDVLYLDGVDLMRKPLLERREQLHKVFKEVPQRFLFARYKNITSADDILPFFEE 476
Query: 606 AVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
AV+ EGL+ KT D+ Y P KRS W KLKKDY+ + D++DL+PI A+ G GKR+G
Sbjct: 477 AVNHRTEGLMCKTTGDDSFYIPDKRSDTWYKLKKDYLSGLQDTVDLIPIGAWLGEGKRSG 536
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
VYGAFLLACY+ +++ ++S+ K+GTGFSE +L E + L+ KV K +P + PD
Sbjct: 537 VYGAFLLACYNEDDDCYESVTKVGTGFSEDVLLEIYTRLKEKV-SKNKPNTVMSGDNLPD 595
Query: 726 VWFEPTERPETSNSPASI 743
VWFEP E E + S+
Sbjct: 596 VWFEPDEVWEIKGADLSL 613
>gi|95007356|emb|CAJ20576.1| DNA ligase, putative [Toxoplasma gondii RH]
Length = 785
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/571 (38%), Positives = 329/571 (57%), Gaps = 41/571 (7%)
Query: 213 TDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESH 272
T ++ N+ R ++ P+ L +Y+ NK+AP + G E+G+G++ I++A+AE GRTE+H
Sbjct: 134 TVVLTNLFRLLLFYAPKTLHKAIYICLNKVAPDYLGQEVGVGESLILRAMAETYGRTEAH 193
Query: 273 VKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
+KK+ Q + DLG +A+ S + P LTI VFD + I++ AGKDSQ K+ +K
Sbjct: 194 LKKELQHIEDLGKIAEQSSCKTRTLFPPPRLTIDGVFDQVKAISQCAGKDSQVHKRELLK 253
Query: 333 ALLVAATDCEPQYLIRLLQSKLRIGLAEQTL----------------------------L 364
LLV EP+Y+IR LQ ++R G + T+ L
Sbjct: 254 RLLVGGKGSEPKYIIRFLQQRMRTGASTATVYQKRRAVSGGNRGSNAKNTSRKNCSSIPL 313
Query: 365 AALGQAAVY------NEQHSKPP---PNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTD 415
++L QA + N ++ +P S L + V++ +P E +V LL
Sbjct: 314 SSLFQALAFACFLTHNARNGRPAIGDTRRYSHLSRMEQSVRRALCEVPNVEVVVGHLLQG 373
Query: 416 G-VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
LS+ C TPGIP+ PMLA+PT+G E++ + + EFTCE+KYDGER Q+H +
Sbjct: 374 ADAEALSSLCVATPGIPLQPMLARPTRGFEEVMERLKQTEFTCEFKYDGERIQLHLISPT 433
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
V ++SRN E T K+PDV+ +P+ +LD E+VAYD E + ILPFQTL+ R
Sbjct: 434 RVRLFSRNLEEITQKYPDVIDMFLASLQPTTEECILDGEVVAYDEENRTILPFQTLTRRK 493
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDS--FEEEPGFFQFATTLT 592
RK V I+V V ++ FD + NG+ LL + L RR+ + + FE P Q AT
Sbjct: 494 RKGVEKDGIEVRVALFLFDCMRLNGECLLGKTLEARRDKMRQAIDFERSP-LVQQATYKD 552
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
+ + FL A++ +CEGL++KT+ +ATYEPSKRSLNWLK+KKDY++ + DS+DLV
Sbjct: 553 IRGAQDFEDFLTEAIEGNCEGLMVKTLRENATYEPSKRSLNWLKVKKDYVDGLTDSVDLV 612
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKP 712
PI A +G+GKR+G +G +LLA Y+ +E FQ++CK TGFSE L++ +L ++I
Sbjct: 613 PIGACYGKGKRSGTFGTYLLAVYNPADETFQTVCKAATGFSEEALQQHHKALSDRIISHK 672
Query: 713 RPYYRFADTISPDVWFEPTERPETSNSPASI 743
+PYY + + DVWFE + E + SI
Sbjct: 673 KPYYDVSPKLEADVWFEACQVWECRAADLSI 703
>gi|237840681|ref|XP_002369638.1| DNA ligase 1 precursor, putative [Toxoplasma gondii ME49]
gi|211967302|gb|EEB02498.1| DNA ligase 1 precursor, putative [Toxoplasma gondii ME49]
gi|221503354|gb|EEE29052.1| DNA ligase 1 precursor, putative [Toxoplasma gondii VEG]
Length = 1112
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/624 (36%), Positives = 341/624 (54%), Gaps = 77/624 (12%)
Query: 192 PFIFLSLV--FDMI---------SNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAAN 240
P +F +LV FD I SN+ +++T N+ R ++ P+ L +Y+ N
Sbjct: 412 PILFEALVNAFDKIEQMKASGTGSNKKQTVVLT----NLFRLLLFYAPKTLHKAIYICLN 467
Query: 241 KIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
K+AP + G E+G+G++ I++A+AE GRTE+H+KK+ Q + DLG +A+ S + P
Sbjct: 468 KVAPDYLGQEVGVGESLILRAMAETYGRTEAHLKKELQHIEDLGKIAEQSSCKTRTLFPP 527
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
LTI VFD + I++ AGKDSQ K+ +K LLV EP+Y+IR LQ ++R G +
Sbjct: 528 PRLTIDGVFDQVKAISQCAGKDSQVHKRELLKRLLVGGKGSEPKYIIRFLQQRMRTGAST 587
Query: 361 QTLLAAL------------GQAAVYNEQHSKPPPN------------------------- 383
T+ AL G+ A+ + + P P
Sbjct: 588 ATVYQALAFACFLTHNARNGRPAIGDTRRYVPSPEETSKDPSSSPSSPSSSPSSSSSSSS 647
Query: 384 ---------------------IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG-VWNLS 421
++S L + V++ +P E +V LL LS
Sbjct: 648 SSSSSSSSSSAPLPSSMSAVELESHLSRMEQSVRRALCEVPNVEVVVGHLLQGADAEALS 707
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
+ C TPGIP+ PMLA+PT+G E++ + + EFTCE+KYDGER Q+H + V ++SR
Sbjct: 708 SLCVATPGIPLQPMLARPTRGFEEVMERLKQTEFTCEFKYDGERIQLHLISPTRVRLFSR 767
Query: 482 NAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLS 541
N E T K+PDV+ +P+ +LD E+VAYD E + ILPFQTL+ R RK V
Sbjct: 768 NLEEITQKYPDVIDMFLASLQPTTEECILDGEVVAYDEENRTILPFQTLTRRKRKGVEKD 827
Query: 542 DIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDS--FEEEPGFFQFATTLTSIDLDEI 599
I+V V ++ FD + NG+ LL + L RRE + + FE P Q A +
Sbjct: 828 GIEVRVALFLFDCMRLNGECLLGKTLEARREKMRQAIDFERSP-LVQQAAYKDIRGAQDF 886
Query: 600 QKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
+ FL A++ +CEGL++KT+ +ATYEPSKRSLNWLK+KKDY++ + DS+DLVPI A +G
Sbjct: 887 EDFLTEAIEGNCEGLMVKTLRENATYEPSKRSLNWLKVKKDYVDGLTDSVDLVPIGACYG 946
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFA 719
+GKR+G +G +LLA Y+ +E FQ++CK TGFSE L++ +L ++I +PYY +
Sbjct: 947 KGKRSGTFGTYLLAVYNPADETFQTVCKAATGFSEEALQQHHKALSDRIISHKKPYYDVS 1006
Query: 720 DTISPDVWFEPTERPETSNSPASI 743
+ DVWFE + E + SI
Sbjct: 1007 PKLEADVWFEACQVWECRAADLSI 1030
>gi|66359502|ref|XP_626929.1| DNA LIGASE I [Cryptosporidium parvum Iowa II]
gi|46228073|gb|EAK88972.1| DNA LIGASE I [Cryptosporidium parvum Iowa II]
Length = 825
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/550 (38%), Positives = 335/550 (60%), Gaps = 34/550 (6%)
Query: 215 IVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVK 274
I+ N+ R ++ P DL+ VY+ NK+AP +EG E G+GD+ +IK ++E+ ++E +K
Sbjct: 193 ILANLFRLIIHHNPSDLIDAVYICMNKVAPDYEGKESGVGDSILIKCISESSDKSEKRIK 252
Query: 275 KQY--QEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
+ + DLG +A + ++ +P LTI V+ + + GK SQ+ KK++IK
Sbjct: 253 EDQISGKFEDLGEIAAICKKQMRLLFEPQRLTIHDVYSDLYSLTEITGKQSQQLKKDKIK 312
Query: 333 ALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY------------------- 373
LLV+ E +Y++R LQ +LRIG+ + T+ AL A V
Sbjct: 313 KLLVSGKQDEVKYIVRFLQGRLRIGIQQTTVYQALASAFVLTKNIPGDNLASFSDYRLAK 372
Query: 374 NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPI 432
NE+ K + + E ++ LP EKI+ + + +S C T GIP
Sbjct: 373 NEKKYKNLQELDCEILEMETSLRSSLCQLPNIEKIINVAIQGASSDEISAKCKLTTGIPC 432
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS----VEIYSRNAERNTG 488
PMLA+PTKG+ +++N+F++ FT EYKYDGERAQIH +D S ++I++RN E T
Sbjct: 433 EPMLARPTKGIQDVLNRFENFLFTAEYKYDGERAQIHVYKDKSNKRVIKIFTRNLESATD 492
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVC 548
++PD++ +++ SV +LD E+VAY + + KILPFQ LSTR RKNV+ DI++ +C
Sbjct: 493 RYPDLIQYLNQSLNSSVEDCILDSEVVAYSKSEDKILPFQVLSTRKRKNVAFDDIQIQIC 552
Query: 549 IYAFDILYRNGQPLLQEQLRVRREHLYDSFEE-EPGFFQFATTLTSIDLDEIQKFLDAAV 607
+ FD + NG+ LL++ L RR++L E + + +F T+ + LD + FL ++
Sbjct: 553 LMLFDCMGFNGESLLKKSLFERRQYLRKCINEGQSEYIKFTTSTETNKLDHLDSFLSESI 612
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
+ +CEGL++KT+ +A+YEPSKRSLNWLK+KKDY++ + DS+D+VPIAA +G+GKR GV+
Sbjct: 613 ENNCEGLMVKTLHDNASYEPSKRSLNWLKIKKDYVDGLTDSIDVVPIAACYGKGKRNGVF 672
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK--PRPYYRF-----AD 720
G FLLA Y++ E ++++CK GTGFS+ +L+ +SL+ +I + P+ YY+F
Sbjct: 673 GTFLLAVYNTEEEVYETVCKAGTGFSDEILQSLYTSLKDHIIAEGAPKSYYKFDSSGQLS 732
Query: 721 TISPDVWFEP 730
++ DVWFEP
Sbjct: 733 SLKQDVWFEP 742
>gi|357472113|ref|XP_003606341.1| DNA ligase [Medicago truncatula]
gi|355507396|gb|AES88538.1| DNA ligase [Medicago truncatula]
Length = 795
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/238 (81%), Positives = 213/238 (89%)
Query: 278 QEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVA 337
+E GDLGLVAKASRSSQSMMRKPD LTI KVF TF LIAKE+GKDSQEKKKN IK+LLVA
Sbjct: 502 EEKGDLGLVAKASRSSQSMMRKPDALTIRKVFKTFHLIAKESGKDSQEKKKNHIKSLLVA 561
Query: 338 ATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQ 397
ATDCEP Y+IRLLQ+KLRIG AEQTLL ALGQAAVY E+HSKPPP IQSP EEAAKIVK+
Sbjct: 562 ATDCEPLYIIRLLQTKLRIGYAEQTLLTALGQAAVYTEEHSKPPPEIQSPFEEAAKIVKK 621
Query: 398 VFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC 457
V+SVLP Y+KIV ALL DGVW L C FTPG+P+GPML+K TKGVSEI+NKFQ +EFTC
Sbjct: 622 VYSVLPDYDKIVSALLKDGVWELPKKCDFTPGVPVGPMLSKATKGVSEILNKFQGVEFTC 681
Query: 458 EYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIV 515
EYKYDGERAQIH+LE+GSVEIYSRNAERNTGKFPDVV AVSRLKK SV SF+LDCE+V
Sbjct: 682 EYKYDGERAQIHFLENGSVEIYSRNAERNTGKFPDVVTAVSRLKKTSVTSFILDCELV 739
>gi|384249290|gb|EIE22772.1| ATP-dependent DNA ligase, partial [Coccomyxa subellipsoidea C-169]
Length = 643
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/560 (39%), Positives = 328/560 (58%), Gaps = 18/560 (3%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W +G P++ ++ F + + T R+ +I+ M R ++ +P D+V YL KIAP
Sbjct: 22 WPEGTPAPYLVIARAFAAMESTTKRLAKDNIMAEMFRGILRCSPGDVVAAAYLTMGKIAP 81
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
HEG EL +G + I A+ EA G + + Y E+GD G VA+A R +Q+M+ +P PLT
Sbjct: 82 EHEGTELNVGGSIISTAIREATGVSRQKLHALYNELGDPGDVAEACRHTQTMLIQPAPLT 141
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ VF + +A++ G + +++ I LL + DCE +YL+R L LR+G ++++
Sbjct: 142 VRGVFKSLHSMAQQKGAGATARRRQTILHLLRSCRDCETRYLVRTLVQNLRVGANWRSVI 201
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT-DGVWNLSNT 423
+L +A + + ++P ++ L+ AA + F V P + +V A+L GV NL
Sbjct: 202 GSLARAVLLESEANRPA---KARLDAAATAAVEAFHVCPSLDILVAAMLEPGGVENLDTR 258
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
S TPG+P+ PMLA T+GV++ + + Q F EYKYDG RAQIH ++G V I+SRN
Sbjct: 259 ISLTPGVPLKPMLASITEGVADAIQQLQGQHFLAEYKYDGIRAQIHLHKNGDVRIFSRNC 318
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKIL-PFQTLSTRARKNVSLSD 542
E T FPDV AV + VLD E+VA DREK L FQ LSTRAR ++ +
Sbjct: 319 EERTSSFPDVADAVRSAAAGGCKEVVLDAELVAVDREKANELKSFQELSTRARGAITSLE 378
Query: 543 IKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEE-EPGFFQFATTLTSIDLDEIQK 601
+KV VC++AFD LY +G+ LL++ L+ RR+ L + PGF A + + I++
Sbjct: 379 VKVPVCVFAFDCLYVDGESLLKQPLQERRKRLAAALPSLRPGFVCLAQSHAGTE-ALIRE 437
Query: 602 FLDAAVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
L A+ A EGL++K + ATY+PSKRS +WLK+K+DY E + DSLDLVPI A+HG
Sbjct: 438 HLQDALAAGTEGLMLKALTGPSATYQPSKRSNSWLKIKRDYCEELRDSLDLVPIGAWHGN 497
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEA--------MLEERSSSLRSKVIPKP 712
G++ G Y FLLA +D + EEFQ++C+ +GFS+A M+ + + I P
Sbjct: 498 GRKVGWYSPFLLAAWDPDAEEFQTVCRCMSGFSDAFYAQARPGMMHPHAMLISFHRIEGP 557
Query: 713 RPYYRFADTISPDVWFEPTE 732
RPYY + P VWFEPTE
Sbjct: 558 RPYY--STNERPSVWFEPTE 575
>gi|357130735|ref|XP_003567002.1| PREDICTED: uncharacterized protein LOC100835014 [Brachypodium
distachyon]
Length = 1365
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/565 (37%), Positives = 331/565 (58%), Gaps = 54/565 (9%)
Query: 183 ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKI 242
ACW G+ P++ L+ FD++ E G+I T ++CNM R++
Sbjct: 757 ACWTTGQPAPYLHLARTFDLVEREKGKIKSTAMLCNMFRSL------------------- 797
Query: 243 APAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP 302
II AL E+ G + S + + Y+ GDLG VA+ R +Q+++ P P
Sbjct: 798 ---------------IISALVESLGTSRSKIHEMYKTHGDLGDVAQECRQNQTLLAPPRP 842
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
L+I V+ T R ++ +G S ++K + L+ + + E ++L+R L LRIG +T
Sbjct: 843 LSIRDVYSTLRKLSAISGGGSAGRRKILVLHLIRSCREMEMKFLVRTLARNLRIGAMMKT 902
Query: 363 LLAALGQAAVYNEQHSKPP----PNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
+L AL A V + + +K I+S L+ + V + ++V+P + +VP+LL +G
Sbjct: 903 ILPALAHAVVLDGKCAKNTVVSLEGIKSELQGLSSEVTEAYNVIPNMDLLVPSLLREGTT 962
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
+++ + PG PI PMLA+ T G+++ + F FTCEYKYDG+RAQIH L GSV+I
Sbjct: 963 FAASSLAMLPGTPIPPMLARITNGLTQALKLFDGRAFTCEYKYDGQRAQIHRLTGGSVQI 1022
Query: 479 YSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK-QKILPFQTLSTRAR-- 535
+SR + +T +FPD+V + L P V SFVLD E+V DR K K++ FQ LS+R R
Sbjct: 1023 FSRQMKDSTSRFPDLVNMIKELCSPEVASFVLDAEVVGIDRNKGNKLMSFQELSSRERGS 1082
Query: 536 --KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL-- 591
++++ +IKVD+C++ FDI++ NG+ LL LR RR +++D F+E+PG F+ A L
Sbjct: 1083 KHSSITIQNIKVDICVFVFDIMFCNGERLLDYPLRQRRNYIHDYFQEKPGHFELAQQLIV 1142
Query: 592 ----TSID----LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE 643
S+D L + F + A +SCEG+++KT+D DA Y SKR +WLK+K+DY+E
Sbjct: 1143 EKNEASVDNSSTLHRMSSFFEKACQSSCEGIMLKTLDVDAGYSASKRCDSWLKVKRDYVE 1202
Query: 644 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSS 703
+GDSLDLVPI A++G G++ G Y FL+ACY+ + EE+QS+C++ +GFS+ +E
Sbjct: 1203 GLGDSLDLVPIGAWYGNGRKAGWYSPFLMACYNPDYEEYQSVCRVMSGFSDEFYKEMKEF 1262
Query: 704 LRSKVIPKPRPYYRFADTISPDVWF 728
+ I +P Y D + P++WF
Sbjct: 1263 YSEERILPKKPVYYKTDEL-PELWF 1286
>gi|406696184|gb|EKC99479.1| DNA ligase [Trichosporon asahii var. asahii CBS 8904]
Length = 727
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/558 (41%), Positives = 326/558 (58%), Gaps = 50/558 (8%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTP------EDLVPVVYLAANKIAP 244
VP+ L F+ I T R+ I I+ L V + P +L+ VVYL N++ P
Sbjct: 128 VPYAALVSTFEKIEATTKRLEILQILTQFLLVVAKRDPAKDAKTSNLLKVVYLCINRLCP 187
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM------R 298
+EG ELGIG++ ++KA+AE+ GR + +K+ ++ GDLG VA S SS+ + R
Sbjct: 188 DYEGTELGIGESLLVKAIAESTGRNANKIKEDLRKEGDLGKVAMVSGSSRPQLTSEFPKR 247
Query: 299 KPDPLTITKVFDTFRL---IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
D + + RL G +K IK LL A E +++IR L+ KLR
Sbjct: 248 SADDVQAQASDCSVRLPEPYGYCQGVGQLARKVGIIKKLLSACQGTEAKFIIRSLEGKLR 307
Query: 356 IGLAEQTLLAALGQAAVYNEQHSK--PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL 413
IGLAE++L+ AL A V E K P + LEE +++VKQV+ V
Sbjct: 308 IGLAERSLVVALAHAMVLKELGDKKVSPEKLAQKLEEGSEVVKQVYRVE----------- 356
Query: 414 TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
S C+ T + PMLAKPTK + E++++F+ FTCEYKYDGERAQ+H L+D
Sbjct: 357 -------SRVCARTANSRL-PMLAKPTKAIGEVLDRFEGKPFTCEYKYDGERAQVHLLDD 408
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
G++ ++SRN+E + K+PD+V + R SFVLD E VA+D E +K+LPFQ LS R
Sbjct: 409 GTISVFSRNSENMSAKYPDLVEQIPR-------SFVLDSEAVAFDLETKKLLPFQDLSRR 461
Query: 534 ARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
RK+V DI V V ++AFD+LY NG+ L+E+ + +EH + + E E F FA +
Sbjct: 462 KRKDVKAEDITVRVHLFAFDLLYLNGEMELKERRALLQEH-FTAVESE---FGFAKSSDG 517
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRDA-TYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
+EIQ FL+ +V CEGL++K + DA TYEPS+RS+NWLK KDY+ +GDSLDLV
Sbjct: 518 STTEEIQTFLEESVKDGCEGLMVKMLASDASTYEPSRRSINWLK--KDYLSGVGDSLDLV 575
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKP 712
+ A++G+GKRT YGAFLLACYD ++E +Q+ICKIGTGFSE +L++ L +
Sbjct: 576 VVGAYYGKGKRTNWYGAFLLACYDPDSENYQTICKIGTGFSEEILKQFYDELHPLELTGG 635
Query: 713 RPYYRFADTISPDVWFEP 730
PDVWFEP
Sbjct: 636 ARGNIEVGGAKPDVWFEP 653
>gi|19074041|ref|NP_584647.1| DNA LIGASE [Encephalitozoon cuniculi GB-M1]
gi|19068683|emb|CAD25151.1| DNA LIGASE [Encephalitozoon cuniculi GB-M1]
Length = 589
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/540 (38%), Positives = 325/540 (60%), Gaps = 23/540 (4%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
++ F V + IS + R+ I I + LR + ET P + P +YL+ + P +
Sbjct: 3 KILFADFCTVLEKISMTSKRLEIQSIFTDYLRNIRETHPPSMAPALYLSIATVYPEYFNK 62
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G+ +++ +AE G++ V+ +Y + GDLG +A R SQ ++ K L + VF
Sbjct: 63 ELGVGENALVGIVAEVTGKSSKGVRNEYSKEGDLGTIAMRCRVSQLLIPKTQ-LEVMDVF 121
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R +A E G S KK I ++V + E +YLIRL++ +L+IGLA +T+L +L
Sbjct: 122 LGMRRVANEEGPRSSSSKKRIILGMMVKCSPLESKYLIRLIEGRLKIGLALKTVLISL-- 179
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A V+++ ++E +K F+ P ++ LL GV LS TPG
Sbjct: 180 ANVFSDD----------KIDE----IKAAFNRQPDIGRLADCLLEHGVEGLSTKFQVTPG 225
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PML+ P+K ++ + ++ FTCEYKYDGER QIH D SVE +SRN+E+ T K
Sbjct: 226 IPLKPMLSNPSKDLTSAFKRVENKSFTCEYKYDGERVQIHRF-DSSVETFSRNSEKTTEK 284
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PD++ L S R F++D EIVAY++++++ILPFQ L+TR RK V + I+V VC+
Sbjct: 285 YPDLM----GLYDVSDRDFIVDGEIVAYNQKERRILPFQVLTTRKRKRVESNKIEVHVCV 340
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+ FD++Y +G+ + E L RR L+ SF+E G F FA +E + F + +V+
Sbjct: 341 FVFDLIYFDGRSWIDEPLEERRRVLHSSFKEIDGKFHFAEFKDCETPEEAETFFNKSVEN 400
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
+ EG++IKT+ DATY PS+RS W+K+KKDY+ES+ DSLDLV + A++G+G+R G YG
Sbjct: 401 NFEGMMIKTLGSDATYLPSQRSNKWIKIKKDYLESMSDSLDLVVMGAYYGKGRRAGFYGG 460
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
FLL Y+ E+F+++CKIGTGF +++L + L S + P+ Y + +++ PDVW E
Sbjct: 461 FLLGVYNDEEEKFEALCKIGTGFDDSILSKLHEQLSSSLCSAPKN-YSYKESVKPDVWVE 519
>gi|145552160|ref|XP_001461756.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429592|emb|CAK94383.1| unnamed protein product [Paramecium tetraurelia]
Length = 564
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/511 (40%), Positives = 316/511 (61%), Gaps = 28/511 (5%)
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRK----- 299
++GL+ GI I+K+++ G++E V+ +GDLGL + S+S+Q+ + K
Sbjct: 4 GNQGLDKGI----IVKSISAVSGKSEKQVRDLMNTLGDLGLAIEKSKSTQTQLNKFFVSQ 59
Query: 300 ----PDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
LT+ +VF+T + + K+ G S +K+ + LL A E +Y+IR ++ L+
Sbjct: 60 TVKEEVKLTMIQVFNTLQQLQKQEGTGSSLEKERILTNLLRMAKPIEAKYIIRFIEKNLK 119
Query: 356 IGLAEQTLLAALGQA-AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
IG AE+T+ AAL +A +Y++ N++ E I+ Q P Y+KI+ L +
Sbjct: 120 IGAAEKTMQAALARAFQLYHK------GNVEGDYE---SIINQALCECPNYKKIIDTLFS 170
Query: 415 -DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
+ + C PG+P PMLAKP K + I +F++M+FTCEYKYDG R QIH+ E+
Sbjct: 171 IQSLKEVPEVCHIIPGVPCKPMLAKPMKSIQMIFQRFENMKFTCEYKYDGLRGQIHF-EN 229
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
G V I+SRN E T +PD+V + K + F++D EIVAYD +ILPFQTL++R
Sbjct: 230 GQVSIFSRNLENMTQTYPDIVTYIHTHYK-HLDGFIIDSEIVAYDVANNRILPFQTLTSR 288
Query: 534 ARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
A+KNV + I++ VC+Y FD+LY N Q L+E L RR+ L ++F+EE G +FAT+ S
Sbjct: 289 AKKNVDQNQIEIQVCLYIFDLLYLNRQSFLKETLEKRRQTLRETFKEEEGKLKFATSRDS 348
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES-IGDSLDLV 652
+ +EI++FL ++ CEGL+IKT++ ++ YEP+KRS NWLKLKKDY+++ + D+ DLV
Sbjct: 349 ENFEEIEEFLLNSIKMGCEGLMIKTLEVNSQYEPAKRSFNWLKLKKDYLDNGLSDTFDLV 408
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKP 712
PI A +G GKR G YG++LLACY+ + +++++ CKIGTGFS+ LE+ + +IP P
Sbjct: 409 PIGACYGTGKRKGFYGSYLLACYNEDMDQYETTCKIGTGFSDENLEKFFQFFQEYLIPHP 468
Query: 713 RPYYRFADTISPDVWFEPTERPETSNSPASI 743
Y+ D ++ DVWF P E ++ I
Sbjct: 469 LSEYK-CDGVNMDVWFSPVVVWEIKSADIQI 498
>gi|303388481|ref|XP_003072475.1| DNA ligase [Encephalitozoon intestinalis ATCC 50506]
gi|303301615|gb|ADM11115.1| DNA ligase [Encephalitozoon intestinalis ATCC 50506]
Length = 589
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 315/540 (58%), Gaps = 23/540 (4%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
++ F+ V + I+ T R+ I I+ + L+ V + P L PV+YL + P +
Sbjct: 3 KILFVDFCTVLERINQTTKRLEIQSILTDYLKDVHKIDPPSLAPVLYLFTATVYPEYFNK 62
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G+ ++I +AE G++ +VKK+Y + GDLG +A R SQ + K L + VF
Sbjct: 63 ELGVGENTLINVVAELTGKSAKNVKKEYSKEGDLGTIAMKCRVSQLFVLKTQ-LEVMDVF 121
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R +A E G+ S KK I ++V + E +YLIRL++ +L++GLA +T+L +L
Sbjct: 122 LGMRKVANEGGQKSSASKKRIILGMMVKCSPLESKYLIRLIEGRLKVGLALKTVLISLAN 181
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + A VK F+ P ++ +L GV L +PG
Sbjct: 182 AFS----------------SDKADEVKAAFNRQPDIGRLAECILEYGVEGLPTKFQVSPG 225
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
+P+ PMLA P+K ++ K ++ FTCEYKYDGER QIH + +E +SRN+E+ T K
Sbjct: 226 VPLKPMLANPSKDLTSAFKKVENKNFTCEYKYDGERIQIHKFGN-RIETFSRNSEKTTEK 284
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PD++ L S R F++D EIVAYDR+++KILPFQ L+TR RK V S I V VC+
Sbjct: 285 YPDLM----DLYNISDRDFIIDGEIVAYDRKERKILPFQILTTRKRKRVESSKIDVQVCV 340
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+ FD++Y +G+ + E RR+ L+ SF+E G FQF +E + F + +V+
Sbjct: 341 FGFDLIYFDGKTYIDEPFEERRKILHSSFKEMDGKFQFTEFKDCETPEESEMFFNESVEK 400
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EG++IK + DATY PS+RS W+K+KKDY+E + DSLDLV + A++G+GKR G YG
Sbjct: 401 GFEGMMIKILGSDATYLPSQRSNKWIKIKKDYLEGMSDSLDLVVMGAYYGKGKRAGFYGG 460
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
FLL Y+ E+F+++CKIGTGF + +L L S + P+ Y + +++ PDVW E
Sbjct: 461 FLLGVYNDEEEKFEALCKIGTGFDDNILSRLYEQLSSNLCSAPKN-YSYKESVKPDVWVE 519
>gi|449329253|gb|AGE95526.1| DNA ligase [Encephalitozoon cuniculi]
Length = 589
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 324/540 (60%), Gaps = 23/540 (4%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
++ F V + IS + R+ I I + LR + ET P + P +YL+ + P +
Sbjct: 3 KILFADFCTVLEKISMTSKRLEIQSIFTDYLRNIRETHPPSMAPALYLSIATVYPEYFNK 62
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G+ +++ +AE G++ V+ +Y + GDLG +A R SQ ++ K L + VF
Sbjct: 63 ELGVGENALVGIVAEVTGKSSKGVRNEYSKEGDLGTIAMRCRVSQLLIPKTQ-LEVMDVF 121
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R +A E G S KK I ++V + E +YLIRL++ +L+IGLA +T+L +L
Sbjct: 122 LGMRRVANEEGPRSSSSKKRIILGMMVKCSPLESKYLIRLIEGRLKIGLALKTVLISL-- 179
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A V+++ ++E +K F+ P ++ LL GV LS TPG
Sbjct: 180 ANVFSDD----------KIDE----IKAAFNRQPDIGRLADCLLEHGVEGLSTKFQVTPG 225
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PML+ P+K ++ + ++ FTCEYKYDGER QIH D VE +SRN+E+ T K
Sbjct: 226 IPLKPMLSNPSKDLTSAFKRVENKSFTCEYKYDGERVQIHRF-DSRVETFSRNSEKTTEK 284
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PD++ L S R F++D EIVAY++++++ILPFQ L+TR RK V + I+V VC+
Sbjct: 285 YPDLM----GLYDVSDRDFIVDGEIVAYNQKERRILPFQVLTTRKRKRVESNKIEVHVCV 340
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+ FD++Y +G+ + E L RR L+ SF+E G F FA +E + F + +V+
Sbjct: 341 FVFDLIYFDGRSWIDEPLEERRRVLHSSFKEIDGKFHFAEFKDCETPEEAETFFNKSVEN 400
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
+ EG++IKT+ DATY PS+RS W+K+KKDY+ES+ DSLDLV + A++G+G+R G YG
Sbjct: 401 NFEGMMIKTLGSDATYLPSQRSNKWIKIKKDYLESMSDSLDLVVMGAYYGKGRRAGFYGG 460
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
FLL Y+ E+F+++CKIGTGF +++L + L S + P+ Y + +++ PDVW E
Sbjct: 461 FLLGVYNDEEEKFEALCKIGTGFDDSILSKLHEQLSSSLCSAPKN-YSYKESVKPDVWVE 519
>gi|396080968|gb|AFN82588.1| DNA ligase [Encephalitozoon romaleae SJ-2008]
Length = 589
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 316/540 (58%), Gaps = 23/540 (4%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
++ F + I+ T R+ I I+ N L+ V ET P L P +YL+ + P +
Sbjct: 3 KILFSDFCATLEKINLTTKRLEIQSILTNYLKEVCETHPPSLAPALYLSTGMVYPEYFNK 62
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G+ +++ +AE G++ ++ +Y + GDLG +A R SQ + K L + VF
Sbjct: 63 ELGVGENALVGVVAEFTGKSIKSIRNEYSKEGDLGTIAMKCRVSQLFIPKTQ-LEVMDVF 121
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R I E G S KK I ++V + E +YLIRL++ +L+IGLA +T+L +LG
Sbjct: 122 LGMRRIVNEGGPKSSSSKKRIILGMMVKCSPLESKYLIRLVEGRLKIGLALKTVLISLG- 180
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
N+ S + +K F+ P ++ +L GV LS TPG
Sbjct: 181 -------------NVFSS--DKVDEIKAAFNRQPDIGRLAECILEHGVEKLSTKFQVTPG 225
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PMLA P+K ++ + +D F CEYKYDGER QIH + ++E +SRN+E+ T K
Sbjct: 226 IPLKPMLANPSKDLTSAFKRVEDKRFACEYKYDGERVQIHRFGN-NIETFSRNSEKTTEK 284
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PD++ L + + F++D EIVAYDR++ KILPFQ L+TR RK V S I V VC+
Sbjct: 285 YPDLM----DLYNIADKDFIIDGEIVAYDRKECKILPFQVLTTRKRKRVESSKIDVHVCV 340
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+ FD++Y +G+ + E L RR L++SF+E G FQFA ++ + F + +V+
Sbjct: 341 FGFDLIYFDGKTYIDELLEERRRVLHNSFKEMKGRFQFAEFKDCETPEDAEAFFNTSVEK 400
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EG+++KT+ DATY PS+RS W+K+KKDY+E + DSLDLV + A++G+GKR G YG
Sbjct: 401 GFEGMMVKTLGSDATYLPSQRSNKWIKIKKDYLEGMSDSLDLVVMGAYYGKGKRAGFYGG 460
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
FLL Y+ E+F+++CKIGTGF + +L + L S + P+ Y + ++I PDVW E
Sbjct: 461 FLLGVYNDEEEKFEALCKIGTGFDDNILSKLYEQLSSNLCGAPKN-YSYKESIKPDVWVE 519
>gi|85001053|ref|XP_955245.1| DNA ligase 1 (precursor) [Theileria annulata strain Ankara]
gi|65303391|emb|CAI75769.1| DNA ligase 1 (precursor), putative [Theileria annulata]
Length = 899
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 235/621 (37%), Positives = 323/621 (52%), Gaps = 96/621 (15%)
Query: 215 IVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVK 274
++ N R ++ P D++PV YL N+I P +E +E+G+GD+ IIKA++EA ++E ++K
Sbjct: 231 LLSNFYRILIYYNPPDVIPVTYLLLNRIYPEYENIEVGVGDSLIIKAMSEAYSKSEQNIK 290
Query: 275 ------------------KQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIA 316
K+Y+ DLGLVA AS + ++ K TI+ VF FR IA
Sbjct: 291 STLNIITNQSIDNNNVVLKKYE---DLGLVAAASSCTSQLLLKLPENTISGVFSHFRSIA 347
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA------ 370
GK+S KK IK LL+ A E +Y+IR LQ +LRIG+ T+ + A
Sbjct: 348 SATGKNSNSNKKEIIKKLLITAKKVESKYIIRSLQQRLRIGIGLNTIFQCIADAFYLTKP 407
Query: 371 AVYNEQHSKPP-------PNIQSPL-------------------EEAAKIVKQVFSVLPV 404
+ S P N+ PL E+ VK ++LP
Sbjct: 408 GMVKSVDSGSPVDPVKVGENVGKPLSKPIGDVRTEKDLRLRYTIEDMEFSVKTAITMLPN 467
Query: 405 YEKIVPALL-TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF--QDMEFTCEYKY 461
EK+V LL D L C TPGIP+ PMLAKP +EI+ + + FTCEYKY
Sbjct: 468 IEKVVGHLLDNDDSEQLVEHCKITPGIPVRPMLAKPVNDSAEILQAVGGEGITFTCEYKY 527
Query: 462 DGERAQIHYLEDGSVE--------IYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCE 513
DGER QIH L+D S+ ++SRN E K+PDVV + KP + ++DCE
Sbjct: 528 DGERVQIHLLKDKSINYGTNNVIRLFSRNMENLMEKYPDVVEHFKKSIKPELEECIVDCE 587
Query: 514 IVAYDREKQKILPFQTLSTRARKNVS--------------------LSDIKVDVCIYAFD 553
+V D E KIL FQ+LSTR RK+V + ++ V VC+Y FD
Sbjct: 588 VVPIDDE-NKILSFQSLSTRKRKDVDPNVSSTTITNYKSYILGIYRVINVSVRVCLYPFD 646
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEG 613
ILY NG+ L+ E L RRE+LYD PG FA +++I FL A+ +CEG
Sbjct: 647 ILYLNGESLVTEPLSKRREYLYDCLTPIPGTLVFAQNKNFDSIEQIDDFLQTAIQDACEG 706
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR-----------GK 662
L+IKT+D ATYEP RS WLK KKDYI + DS+DLVPI AF G+ GK
Sbjct: 707 LMIKTLDDKATYEPQARSNKWLKYKKDYITGLSDSVDLVPIGAFFGKVSIIPSGHLYIGK 766
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R V+G++LLA YD E +Q +CK GTGF++ L++ SL+ + P Y ++ +
Sbjct: 767 RISVFGSYLLAVYDPIQELYQGVCKTGTGFTDQALKDLHDSLQKDITPNKPKMYDVSEKM 826
Query: 723 SPDVWFEPTERPETSNSPASI 743
PDVWF P + E + SI
Sbjct: 827 EPDVWFLPKKVWECKAADLSI 847
>gi|401825510|ref|XP_003886850.1| DNA ligase [Encephalitozoon hellem ATCC 50504]
gi|392998006|gb|AFM97869.1| DNA ligase [Encephalitozoon hellem ATCC 50504]
Length = 589
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/540 (38%), Positives = 318/540 (58%), Gaps = 23/540 (4%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
++ F + I+ T R+ I I+ + L+ V +T P+ L P +YL+ + P +
Sbjct: 3 KILFSDFCATLEKINLTTKRLEIQSILTDYLKEVCKTHPQSLAPALYLSTGMVYPEYFNK 62
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+G+ ++ +AE G++ +++ +Y ++GDLG +A R SQ + K L + VF
Sbjct: 63 ELGVGENMLVSVVAEFTGKSIKNIRSEYSKVGDLGTIAMKCRVSQLFIPKTQ-LEVMDVF 121
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R I E G S KK I ++V + E +YL+RL++ +L+IGLA +T+L +LG
Sbjct: 122 LGMRRIVGEEGPKSSSSKKRIILGMMVKCSPLESKYLVRLIEGRLKIGLALKTVLISLG- 180
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
N+ S + A +K F+ P ++ +L G+ NL+ TPG
Sbjct: 181 -------------NVFSS--DKADEIKAAFNRQPDIGRLAECILDHGMENLAVRFQVTPG 225
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PMLA P+K ++ + ++ F CEYKYDGER QIH S+E +SRN+E+ T K
Sbjct: 226 IPLKPMLANPSKDLTSAFKRVENKSFACEYKYDGERVQIHKF-GSSIETFSRNSEKTTEK 284
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PD++ L S + F++D EIVAYDR + KILPFQ L+TR RK V S I V VC+
Sbjct: 285 YPDLM----DLYNISDKDFIIDGEIVAYDRREGKILPFQVLTTRKRKRVESSKIDVHVCV 340
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+AFD++Y +G+ + E L RR L+ SF E G FQFA ++ + F +V+
Sbjct: 341 FAFDLIYFDGKAYIDEVLEERRRVLHSSFREVEGRFQFAEFRDCETPEDAETFFSTSVEK 400
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EG+++KT+ D TY PS+RS W+K+KKDY+ES+ DSLDLV + A++G+GKRTG YG
Sbjct: 401 GFEGIMVKTLGPDTTYLPSQRSNKWIKIKKDYLESMSDSLDLVVMGAYYGKGKRTGFYGG 460
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
FLL Y+ E+F+++CKIGTGF +++L + L S + P+ Y + +++ PDVW E
Sbjct: 461 FLLGVYNDEEEKFEALCKIGTGFDDSILSKLYEQLSSNLCSAPKN-YSYKESVKPDVWVE 519
>gi|407043431|gb|EKE41951.1| ATP-dependent DNA ligase domain containing protein [Entamoeba
nuttalli P19]
Length = 687
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/559 (37%), Positives = 335/559 (59%), Gaps = 15/559 (2%)
Query: 186 EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPA 245
+K + +PF L+ FD + NE+G++ +I N L+TV+ P DL V+ L +IAP
Sbjct: 64 QKVKTLPFKGLADCFDALENESGKLKKREIYANYLKTVITICPNDLTDVLNLTTGQIAPT 123
Query: 246 HEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTI 305
EG ELGIGDA + + G S + + +E+GD+G+VA+ S+ +Q ++ +P PLTI
Sbjct: 124 WEGKELGIGDAILKDVVKSVTGLKLSQLNDKIKELGDIGIVAQNSKKNQKLLVQPKPLTI 183
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
V + I + D+ + KKN+I ALLVAA E ++++R+L+ RIG +++L
Sbjct: 184 QGVVLRMKEILE---ADNSDIKKNKITALLVAAIGNEIRFILRILKGVFRIGFTDRSLPP 240
Query: 366 ALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL-TDGVWNLSNTC 424
A+ QA + + + +EE +++ + +P ++ + + D + T
Sbjct: 241 AIAQAVCSIRKEN-------NRIEELTELITNAVARVPSFQYLSEHITANDPFEEFAKTN 293
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
S IP PMLAKP K +++I ++F+ FT EYKYDGER QIH+ ++ + +++RN E
Sbjct: 294 SVQLFIPFRPMLAKPKKSITDITSRFK-FPFTAEYKYDGERGQIHFSKN-KIMVFTRNLE 351
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
T K+PDV+ AV P+V+SF++DCEIVA++RE + FQ L RA+K VS+ I
Sbjct: 352 NYTEKYPDVIEAVKEAVNPNVQSFIIDCEIVAFNRETNEFQEFQILGRRAKKGVSVHSIA 411
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
++VC+ FDI+Y NG+ L+ + L+ RR+ L+ +F E F FA + ++I F +
Sbjct: 412 INVCVNVFDIVYLNGKDLMDKPLKERRDILHSTFHEVAQRFLFARFKNIENEEDILPFFE 471
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A++ EGL+ KT+ DA Y P KR+ W KLKKDY+ + D++DLVP+ A+ G GKR
Sbjct: 472 EAINHRTEGLMCKTLIYDAEYIPDKRTDTWYKLKKDYLNGLADTVDLVPVGAWMGEGKRA 531
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
GVYGAFLLAC D ++ +F+++ K+GTGFS+ L++ L++ + K + + D + P
Sbjct: 532 GVYGAFLLACRDEDSGDFETVTKVGTGFSDEALQKLYEHLKT-LECKEKKNVKHGDNL-P 589
Query: 725 DVWFEPTERPETSNSPASI 743
DVWFEP + E + S+
Sbjct: 590 DVWFEPKDVWEIKGADLSL 608
>gi|449710415|gb|EMD49495.1| DNA ligase, putative [Entamoeba histolytica KU27]
Length = 685
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/559 (37%), Positives = 335/559 (59%), Gaps = 15/559 (2%)
Query: 186 EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPA 245
+K + +PF L+ FD + NE+G++ +I N L+TV+ P DL V+ L +IAP
Sbjct: 62 QKVKTLPFKGLADCFDALENESGKLKKREIYANYLKTVITICPNDLTDVLNLTTGQIAPT 121
Query: 246 HEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTI 305
EG ELGIGDA + + G S + + +E+GD+G+VA+ S+ +Q ++ +P PLTI
Sbjct: 122 WEGKELGIGDAILKDVVKSVTGLKLSQLNDKIKELGDIGIVAQNSKKNQKLLVQPKPLTI 181
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
V + I + D+ + KKN+I ALLVAA E ++++R+L+ RIG +++L
Sbjct: 182 QGVVLRMKEILE---ADNSDIKKNKITALLVAAIGNEIRFILRILKGVFRIGFTDRSLPP 238
Query: 366 ALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL-TDGVWNLSNTC 424
A+ QA + + + +EE +++ + +P ++ + + D + T
Sbjct: 239 AIAQAVCSIRKEN-------NRIEELTELITNAVARVPSFQYLSEHITANDPFEEFAKTN 291
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
S IP PMLAKP K +++I ++F+ FT EYKYDGER QIH+ ++ + +++RN E
Sbjct: 292 SVQLFIPFRPMLAKPKKSITDITSRFK-FPFTAEYKYDGERGQIHFNKN-KIMVFTRNLE 349
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
T K+PDV+ AV P+V+SF++DCEIVA++RE + FQ L RA+K VS+ I
Sbjct: 350 NYTEKYPDVIEAVKDAVNPNVQSFIIDCEIVAFNRETNEFQEFQILGRRAKKGVSVHSIA 409
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
++VC+ FDI+Y NG+ L+ + L+ RR+ L+ +F E F FA + ++I F +
Sbjct: 410 INVCVNVFDIVYLNGKDLMDKPLKERRDILHSTFHEVSQRFLFARFKNIENEEDILPFFE 469
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A++ EGL+ KT+ DA Y P KR+ W KLKKDY+ + D++DLVP+ A+ G GKR
Sbjct: 470 EAINHRTEGLMCKTLIYDAEYIPDKRTDTWYKLKKDYLNGLADTVDLVPVGAWMGEGKRA 529
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
GVYGAFLLAC D ++ +F+++ K+GTGFS+ L++ L++ + K + + D + P
Sbjct: 530 GVYGAFLLACRDEDSGDFETVTKVGTGFSDEALQKLYEHLKT-LECKEKKNVKHGDNL-P 587
Query: 725 DVWFEPTERPETSNSPASI 743
DVWFEP + E + S+
Sbjct: 588 DVWFEPKDVWEIKGADLSL 606
>gi|67484750|ref|XP_657595.1| DNA ligase [Entamoeba histolytica HM-1:IMSS]
gi|56474856|gb|EAL52210.1| DNA ligase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 685
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/559 (37%), Positives = 335/559 (59%), Gaps = 15/559 (2%)
Query: 186 EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPA 245
+K + +PF L+ FD + NE+G++ +I N L+TV+ P DL V+ L +IAP
Sbjct: 62 QKVKTLPFKGLADCFDALENESGKLKKREIYANYLKTVITICPNDLTDVLNLTTGQIAPT 121
Query: 246 HEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTI 305
EG ELGIGDA + + G S + + +E+GD+G+VA+ S+ +Q ++ +P PLTI
Sbjct: 122 WEGKELGIGDAILKDVVKSVTGLKLSQLNDKIKELGDIGIVAQNSKKNQKLLVQPKPLTI 181
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
V + I + D+ + KKN+I ALLVAA E ++++R+L+ RIG +++L
Sbjct: 182 QGVVLRMKEILE---ADNSDIKKNKITALLVAAIGNEIRFILRILKGVFRIGFTDRSLPP 238
Query: 366 ALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL-TDGVWNLSNTC 424
A+ QA + + + +EE +++ + +P ++ + + D + T
Sbjct: 239 AIAQAVCSIRKEN-------NRIEELTELITNAVARVPSFQYLSEHITANDPFEEFAKTN 291
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
S IP PMLAKP K +++I ++F+ FT EYKYDGER QIH+ ++ + +++RN E
Sbjct: 292 SVQLFIPFRPMLAKPKKSITDITSRFK-FPFTAEYKYDGERGQIHFNKN-KIMVFTRNLE 349
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
T K+PDV+ AV P+++SF++DCEIVA++RE + FQ L RA+K VS+ I
Sbjct: 350 NYTEKYPDVIEAVKDAVNPNIQSFIIDCEIVAFNRETNEFQEFQILGRRAKKGVSVHSIA 409
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
++VC+ FDI+Y NG+ L+ + L+ RR+ L+ +F E F FA + ++I F +
Sbjct: 410 INVCVNVFDIVYLNGKDLMDKPLKERRDILHSTFHEVSQRFLFARFKNIENEEDILPFFE 469
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A++ EGL+ KT+ DA Y P KR+ W KLKKDY+ + D++DLVP+ A+ G GKR
Sbjct: 470 EAINHRTEGLMCKTLIYDAEYIPDKRTDTWYKLKKDYLNGLADTVDLVPVGAWMGEGKRA 529
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
GVYGAFLLAC D ++ +F+++ K+GTGFS+ L++ L++ + K + + D + P
Sbjct: 530 GVYGAFLLACRDEDSGDFETVTKVGTGFSDEALQKLYEHLKT-LECKEKKNVKHGDNL-P 587
Query: 725 DVWFEPTERPETSNSPASI 743
DVWFEP + E + S+
Sbjct: 588 DVWFEPKDVWEIKGADLSL 606
>gi|167378394|ref|XP_001734783.1| DNA ligase [Entamoeba dispar SAW760]
gi|165903537|gb|EDR29037.1| DNA ligase, putative [Entamoeba dispar SAW760]
Length = 686
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/559 (37%), Positives = 334/559 (59%), Gaps = 15/559 (2%)
Query: 186 EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPA 245
+K + +PF L+ FD + NETG++ +I N L+TV+ P DL V+ L +IAP
Sbjct: 63 QKVKTLPFKGLADCFDALENETGKLKKREIYANYLKTVIAICPNDLTDVLNLTTGQIAPT 122
Query: 246 HEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTI 305
EG ELGIGDA + + G S + + +E+GD+G+VA+ S+ +Q ++ +P PLTI
Sbjct: 123 WEGKELGIGDAILKDVVKGVTGLKLSQLNDKIRELGDIGIVAQNSKKNQKLLVQPKPLTI 182
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
V + I + D+ + KKN+I ALLVAA E ++++R+L+ RIG +++L
Sbjct: 183 QGVVLRMKEILE---ADNSDVKKNKITALLVAAIGNEIRFILRILKGVFRIGFTDRSLPP 239
Query: 366 ALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL-TDGVWNLSNTC 424
A+ QA + + + +EE +++ + +P ++ + + D + T
Sbjct: 240 AIAQAVCSIRKEN-------NRIEELTELITNAVARVPSFQYLSEHITANDPFEEFAKTN 292
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
+ IP PMLAKP K V++I ++F+ FT EYKYDGER QIH+ ++ V +++RN E
Sbjct: 293 AVQLFIPFRPMLAKPKKSVTDITSRFK-FPFTAEYKYDGERGQIHFNKN-KVMVFTRNLE 350
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
T K+PDV+ AV +V+SF++DCEIVA++RE + FQ L RA+K VS+ I
Sbjct: 351 NYTEKYPDVIEAVKEAVNSNVQSFIIDCEIVAFNRETNEFQEFQILGRRAKKGVSVHSIA 410
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
++VC+ FDI+Y NG+ L+ + L+ RR+ L+ +F E F FA + ++I F +
Sbjct: 411 INVCVNVFDIVYLNGKDLMDKPLKERRDILHSTFHEVSQRFLFARFKNIENEEDILPFFE 470
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A++ EGL+ KT+ DA Y P KR+ W KLKKDY+ + D++DLVP+ A+ G GKR
Sbjct: 471 EAINHRTEGLMCKTLVYDAEYIPDKRTDTWYKLKKDYLNGLADTVDLVPVGAWMGEGKRA 530
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
GVYGAFLLAC D ++ +F+++ K+GTGFS+ L++ L++ + K + + D + P
Sbjct: 531 GVYGAFLLACRDEDSGDFETVTKVGTGFSDEALQKLYEHLKT-LECKEKKNVKHGDNL-P 588
Query: 725 DVWFEPTERPETSNSPASI 743
DVWFEP + E + S+
Sbjct: 589 DVWFEPKDVWEIKGADLSL 607
>gi|429962074|gb|ELA41618.1| DNA ligase I, ATP-dependent (dnl1) [Vittaforma corneae ATCC 50505]
Length = 588
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/543 (38%), Positives = 319/543 (58%), Gaps = 29/543 (5%)
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE 247
++ FI L F+ ISN T R+ I DI+ + + V+ + L V+YL I P +
Sbjct: 6 AKKTLFIDLCKEFEKISNTTKRLEIQDILSSFFKKVISEDSQSLSSVLYLCHASIYPDYH 65
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITK 307
ELGIG+ I +AE G T +K++Y + GDLG +A SR +Q + K LT+ +
Sbjct: 66 NTELGIGEHMIQMVVAEGTGLTVKTIKQRYIKTGDLGEIAMESRVNQLFISKR-QLTVVE 124
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
V D R I++E G++S KKN + +L+ A++ E +Y+IRL + +L+IGLA QT+L +L
Sbjct: 125 VVDQLRRISRETGRNSMNSKKNIMLSLISASSPLEAKYMIRLFECQLKIGLALQTVLISL 184
Query: 368 GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
A +E + +K+ ++ P +E + LL GV L CS
Sbjct: 185 SLAFGEHEHDA----------------IKEAYNKHPDFEHLSKMLLEHGVERLHEMCSIV 228
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNT 487
PGIP+ PMLA+P+K ++ K ++ EF E+KYDGER QIH+ DG +++SRN+E T
Sbjct: 229 PGIPVKPMLAQPSKNLTTAFAKVENEEFLSEFKYDGERVQIHHF-DGKTKVFSRNSEDLT 287
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV 547
K+PD+ S LK + +SFVLD E VAY E ILPFQTLSTR RKN+ I+V+V
Sbjct: 288 EKYPDI----SSLK-INEKSFVLDGEAVAY--EDGAILPFQTLSTRKRKNID--KIEVNV 338
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
C++ FD+L+ + Q L+ + RR+ L +F+E Q A + ++++ A+
Sbjct: 339 CVFVFDLLFYDSQELVHYPFKTRRDILKSNFKEIDDKLQMANGVECTSIEDVDSHFKVAL 398
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
A+CEG+++K + + Y+PS RS W+KLKKDY++++GDSLDLV I AF+G+GKRTG +
Sbjct: 399 QANCEGVMLKLLQ--SIYKPSHRSNKWVKLKKDYLDNLGDSLDLVVIGAFYGKGKRTGNF 456
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVW 727
G FLLA Y+ ++F++ CKIGTGF++ L+ L + ++ PDVW
Sbjct: 457 GGFLLAVYNDETDKFEACCKIGTGFNDEALQLYYDQLSPLITANLSRVVYNERSVKPDVW 516
Query: 728 FEP 730
EP
Sbjct: 517 IEP 519
>gi|258563926|ref|XP_002582708.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908215|gb|EEP82616.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 828
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/609 (35%), Positives = 337/609 (55%), Gaps = 66/609 (10%)
Query: 187 KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAH 246
+G R + L+ F ++++ RI I DI+ N+LR ++E P+ L+P V+LA N AP +
Sbjct: 157 EGGRASYSILARAFSLVNSTQSRIKIVDILVNLLRILIEGNPDSLLPAVWLATNAFAPPY 216
Query: 247 EGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTI 305
LELG+G ++I KAL +A G +K Y + GD G VA ++ QS +R+P PL+I
Sbjct: 217 VPLELGLGGSAISKALKKAYGLDNLGLKSLYDKHGDAGDVAYEAKKKQSFTLRRPKPLSI 276
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLL 364
V+D+ IA G SQE K+ ++ LL A E +Y++R L LRIG T+L
Sbjct: 277 KGVYDSLTGIANSKGTGSQENKQRIVEQLLRDARGAEESRYIVRTLVQHLRIGAVRTTML 336
Query: 365 AALGQAAVYNEQHSKPP---------PNIQSPLEE--------AAKIVKQVFSVLPVYEK 407
AL +A +Y S+PP P++ + ++ A +IVK ++ P Y
Sbjct: 337 IALARAFLY----SRPPSATFEVYLQPDLMNLKKDELSNLYARAEEIVKASYARHPNYND 392
Query: 408 IVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
++P LL G+ + C + IP+ PML T+ ++E++ K Q +F+CEYKYDG+RA
Sbjct: 393 LIPCLLETGISKAVLAKCGLSLHIPLLPMLGSITRDLTEMLTKLQGKKFSCEYKYDGQRA 452
Query: 467 QIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP 526
Q+H G V ++SR+ E T K+PD+V V +++ V SF+L+ E+VA D+E +LP
Sbjct: 453 QVHCDTAGKVSLFSRHLEFMTDKYPDLVSLVPQIRGDGVSSFILEGEVVAVDQESGDLLP 512
Query: 527 FQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
FQTLS RA+KNV +S+IK++VC++AFD++Y NG+PLL+ R RRE L F E P F
Sbjct: 513 FQTLSNRAKKNVEMSNIKINVCLFAFDLMYLNGEPLLERSFRERRELLRSLFVEIPKRFS 572
Query: 587 FATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD---------------------- 622
+ ++ TS D D I F A CEG+++K +D D
Sbjct: 573 WVKSIDATSTDSDMILNFFREATKEKCEGIMVKVLDTDVEAVETVGLGSAIKESSNIAKE 632
Query: 623 -----------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
+TYEP KR +WLK+KKDY + D+LDL+PIA +HG+G++ + L
Sbjct: 633 KQKGTRKRALLSTYEPDKRLESWLKVKKDY-STASDTLDLIPIAGWHGQGRKAKWWSPIL 691
Query: 672 LACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
LA + +++ K +GF++ + E+ + VI +P Y + + P+VWF
Sbjct: 692 LAVRNPETGSLEAVTKCMSGFTDKFYQENKEKYAEHGDNVISRP-SYVDYRN--EPEVWF 748
Query: 729 EPTERPETS 737
EP E E +
Sbjct: 749 EPQEVWEVA 757
>gi|299115435|emb|CBN75600.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1043
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/358 (48%), Positives = 247/358 (68%), Gaps = 7/358 (1%)
Query: 380 PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKP 439
P +++ LE A ++VKQ +S ++I+ A+L+ ++ L C TPG+P+ PMLAKP
Sbjct: 600 PASHLEQRLELACQLVKQAYSECRNLDQIIKAILSTPLYRLQQACRLTPGVPVLPMLAKP 659
Query: 440 TKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSR 499
TK + E++ + EFTCEYKYDG RAQ+H+ EDGS+ +SRN++ ++ + PD++ +
Sbjct: 660 TKSIGEVLQRLSGQEFTCEYKYDGVRAQVHHKEDGSLRFFSRNSKDSSSELPDLIPVMKD 719
Query: 500 LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNG 559
K V S+V+D E+VAYDRE +LPFQ LSTR RK+V D+KV V + AFD+LY NG
Sbjct: 720 CVKEGVSSYVIDTEVVAYDRETGNLLPFQMLSTRGRKDVDAEDVKVKVIVEAFDMLYLNG 779
Query: 560 QPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT---SIDLDEIQKFLDAAVDASCEGLII 616
Q LLQ+ L+ RR L +F+E G F+FAT + D I++FL AV +CEGL++
Sbjct: 780 QSLLQKPLKQRRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMV 839
Query: 617 KTMDRDATYEPSKRSLNWLKLKKDYIES----IGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
KT+ +++YEPSKRSLNWLKLKKDY+++ +GDSLDLVPI AF G+GKRTG YGA+LL
Sbjct: 840 KTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLL 899
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
ACY+ + EE+QS+CKIGTGF++ +L L+ + + YY AD++SPDVW P
Sbjct: 900 ACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPRYYNVADSLSPDVWLAP 957
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 120/193 (62%), Gaps = 3/193 (1%)
Query: 183 ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKI 242
A W+KG+ VPF ++ +FD + + R+ I +I+ L TV+ TPEDLVP VYLA N++
Sbjct: 298 ASWKKGQPVPFSAVAEMFDRVEQTSKRLEIQEILRGFLCTVIALTPEDLVPCVYLACNQL 357
Query: 243 APAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM---RK 299
AP++EG+ELGIGD + K++ A GR+ +K Q+ GDLG VA+ S SQ + +
Sbjct: 358 APSYEGMELGIGDMVLQKSIQGATGRSAKDIKAAAQKAGDLGEVAQHSTKSQGTLSFGQT 417
Query: 300 PDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLA 359
L+ + +R IA+ G S E K NRIK +LV+ + +Y+IR LQ K+R+GL
Sbjct: 418 IKALSARDGLERYRAIARVKGNSSGEDKINRIKKMLVSCKGLQAKYIIRGLQGKMRVGLT 477
Query: 360 EQTLLAALGQAAV 372
+ T++ +L AAV
Sbjct: 478 DTTVMVSLSHAAV 490
>gi|327355725|gb|EGE84582.1| DNA ligase [Ajellomyces dermatitidis ATCC 18188]
Length = 861
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 242/727 (33%), Positives = 371/727 (51%), Gaps = 91/727 (12%)
Query: 93 DTQTPKTTNSVVGEKIQ-EVAEEPSNDLVKP-ISNQIDNPIDSEK-----------ESQP 139
+ + P T+ + K+Q E EE S+ L P ++ + E E QP
Sbjct: 39 NAEAPSLTDEELARKLQAEWNEEASSGLQNPSVARDSLGSVSKEAKLEDRDPKFGLEPQP 98
Query: 140 TPPSPKKRKVN----VNSVSAKEKIAELKSNIVLLKKKAGEFDP-----KMVACWE-KGE 189
P SP ++ V S+ ++ S + + FDP ++ WE G
Sbjct: 99 QPLSPTDFTIDKAKSVLSLQTSSNDEDIISQSIPFDQSPLTFDPSDYLDQLRTHWEVDGG 158
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
+ P+ L+ F +++N R I D + N LR ++E P+ L P V+LA N IAP + L
Sbjct: 159 QAPYAILTRTFVLVNNTQSRNQIIDSLVNFLRVIIEADPDSLAPAVWLATNAIAPPYVPL 218
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-KASRSSQSMMRKPDPLTITKV 308
ELG+G ++I KAL A G +K Y + GD G VA +A + + +RKP PL+I V
Sbjct: 219 ELGLGGSAISKALKNAYGLNNQGLKILYDKHGDAGDVAFEAKKRQKFTLRKPKPLSIRGV 278
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAAL 367
+++ I+K G SQE K+ I+ LL D E ++L+R L LRIG T+L AL
Sbjct: 279 YESLLKISKSKGPGSQETKQRIIEKLLQDTRDAEESRFLVRTLVQHLRIGAVRTTMLIAL 338
Query: 368 GQAAVYNE--------QHSKPPPNIQSP-----LEEAAKIVKQVFSVLPVYEKIVPALLT 414
+A +Y+ H + ++ A + VK F+ P Y+ +VP LL
Sbjct: 339 ARAFLYSRPATSSFTVHHRRDLAKLKKEELTGIYSRAEETVKACFARHPNYDDLVPCLLE 398
Query: 415 DGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
G+ + L C T IP+ PML T+ +++++ K Q FTCEYKYDG+RAQ+H
Sbjct: 399 IGISDELIVRCGLTLHIPLCPMLGSITRDLTQMLTKLQGRAFTCEYKYDGQRAQVHCDSS 458
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
G+V I+SR+ E T K+PD+V + +++ V SF+L+ EIVA ++E +IL FQTL+ R
Sbjct: 459 GTVSIFSRHLELMTDKYPDLVALIPKIRGEGVSSFILEGEIVAVNQETGEILAFQTLTNR 518
Query: 534 ARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL-- 591
A+KNV + IK+ VC++AFD+++ NG+PLL+ LR RRE L F E P F + +
Sbjct: 519 AKKNVGIDSIKISVCLFAFDLMFLNGEPLLERPLRERRELLRGLFIEVPHHFTWVKNIDV 578
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD----------------------------- 622
TS D + + F A DA CEGL++K +D D
Sbjct: 579 TSSDSEAVLSFFKDATDAKCEGLMVKLLDDDVVKPDLSKEESTAAPASTSKLPPTLTTVE 638
Query: 623 --------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
+TYEP KR +WLK+KKDY + D+LDL+PIAA+HG+G++ +
Sbjct: 639 PSGNAKSRGRRSLLSTYEPDKRLESWLKVKKDY-SAASDTLDLIPIAAWHGQGRKAKWWS 697
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTISPD 725
LLA + +++ K +GF++ + E+ + +I +P Y + + P+
Sbjct: 698 PILLAVRNPETGLLEAVTKCISGFTDKFYQANKEKYAEGSDNIITRP-AYVEYRN--EPE 754
Query: 726 VWFEPTE 732
VWFEP E
Sbjct: 755 VWFEPQE 761
>gi|429852695|gb|ELA27819.1| DNA ligase [Colletotrichum gloeosporioides Nara gc5]
Length = 867
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/676 (34%), Positives = 348/676 (51%), Gaps = 92/676 (13%)
Query: 141 PPSPKKRKVNVNSVSAKEKIAELKSNIVL----LKKKAGEFDPKMVACW-EKGERVPFIF 195
P +PKK ++++SV+ E A + I L L EF P++ W +G + F
Sbjct: 122 PQAPKKNTLSLSSVANAEDTA--SATIPLDQSPLTFDPSEFTPQLKEQWASEGGHASYAF 179
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ F +++ RI I D + N +R ++E P+ L+P V+LA N I+P + LELG+G
Sbjct: 180 LTRCFVLVNGTQSRIKIVDTLVNSIRVLIEADPDSLLPAVWLATNAISPPYISLELGLGG 239
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRL 314
++I KAL + CG +K Y + GD G VA ++ QS +RKP PLTI V+ +
Sbjct: 240 SAISKALKQVCGLDGRALKTIYDKYGDAGDVAFEAKKKQSFTLRKPKPLTIQAVYQSLVK 299
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVY 373
IA G+ S E K+ + LL A E +Y++R L LRIG + T+L AL +A +
Sbjct: 300 IANSQGQGSGEAKQRIVDKLLQDARGGEESRYIVRTLCQHLRIGAVKTTMLIALSRAFLL 359
Query: 374 NEQHSKPPPNIQSPLE------------------EAAKIVKQVFSVLPVYEKIVPALLTD 415
+ P + PL +A +IVK F+ P Y +VP LL
Sbjct: 360 SR-----PAGAEFPLRSVKDLQKLKKDELAEVWSKAEEIVKACFARRPNYNDLVPVLLEI 414
Query: 416 GVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
GV + L C T IP+ PML T+ +SE++ K Q +F CE+KYDG+RAQIH E G
Sbjct: 415 GVCDELLIRCGLTLHIPLRPMLGSITRDLSEMLTKLQGRDFACEFKYDGQRAQIHCDEKG 474
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
V I+SR+ E T K+PD+V + +++ V SF+++ E+VA DRE + FQTL+ RA
Sbjct: 475 KVTIFSRHLELMTDKYPDLVALMPKIRGEGVDSFIMEGEVVAVDRETGDLKNFQTLTNRA 534
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--T 592
RK+V++ I+VDVC++AFD+++ NGQPLL R RRE L F E P F + L T
Sbjct: 535 RKDVAIGSIQVDVCMFAFDLMFLNGQPLLDRPFRERRELLRSMFIEVPHQFTWVKNLDAT 594
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMD-------------------------------- 620
S D D + F A D CEG+++K +D
Sbjct: 595 SQDSDAVLDFFKQATDIKCEGIMVKILDNLTDIPYQGDDTAEADGETAEEPKTPSKTKRG 654
Query: 621 ---RD--------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
+D ATYEP KR +WLK+KKDY S D+LD++P+A +HG+G++
Sbjct: 655 KGTKDEEAPKKKGRRKPLLATYEPDKRLDSWLKVKKDYSSSF-DTLDMIPVAGWHGQGRK 713
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEA-------MLEERSSSLRSKVIPKPRPYY 716
+ L+A + + + +CK +GF++A ++ ++ + +P +
Sbjct: 714 AKWWSPILMAVRNEDTGSLEVVCKCMSGFTDAFYKANRDFYDDGEATGEGRNTRGQKPAF 773
Query: 717 RFADTISPDVWFEPTE 732
PDVWFEP E
Sbjct: 774 VEYSGPEPDVWFEPQE 789
>gi|342874135|gb|EGU76205.1| hypothetical protein FOXB_13277 [Fusarium oxysporum Fo5176]
Length = 869
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 245/762 (32%), Positives = 366/762 (48%), Gaps = 115/762 (15%)
Query: 78 NSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDL---VKPISNQIDNPIDSE 134
N + SS +PK + + + + E QEVA P N L + ++ + + +
Sbjct: 33 NDTDSSKNPKTEENAEDE--ELARKLQAEWDQEVANTPQNTLQAQTLELPSKHNESVSRD 90
Query: 135 KESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGE---------------FDP 179
+ P P PK +++ + K + L E FDP
Sbjct: 91 ESPSPAGPKPKPPVTLPTALNKPGTLTSTKPTLSLQAAGMAEDTTTTSIPLDESPLTFDP 150
Query: 180 -----KMVACW-EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP 233
++ W +G + L+ F +I+ T RI I D + N LR ++E P L+P
Sbjct: 151 SEYLDQLKEHWASEGGNASYALLTRCFILINGTTSRIKIVDTLVNCLRVLIEGDPTSLLP 210
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS 293
V+LA N I+P + +ELG+G ++I KAL CG +K Y + GD G VA ++
Sbjct: 211 AVWLATNAISPPYISMELGLGGSAISKALRNVCGLDNRALKAIYDKFGDAGDVAFEAKKK 270
Query: 294 QSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQ 351
QS +RKP PLTI V++T IA G+ S E K+ + LL A E ++++R L
Sbjct: 271 QSFTLRKPKPLTIKGVYETLVKIANSQGQGSSETKQRLVDRLLQDARGGEESRFVVRTLS 330
Query: 352 SKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLE------------------EAAK 393
LRIG + T+L AL +A + + PP PL+ A +
Sbjct: 331 QHLRIGAVKTTMLIALSRAFLLSR-----PPGADFPLKSVSDLAKLKKEDLAEIWGRAEE 385
Query: 394 IVKQVFSVLPVYEKIVPALLTDGV-WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
IVK F+ P Y +VP LL G+ L C T IP+ PML T+ +SE++ K Q
Sbjct: 386 IVKACFARRPNYNDLVPVLLEIGISEELLIRCGLTMHIPLRPMLGSITRDLSEMLTKLQG 445
Query: 453 MEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDC 512
+F CE+KYDG+RAQIH E G V I+SR+ E T K+PD+V + +++ V SF+++
Sbjct: 446 RDFACEFKYDGQRAQIHCDESGEVSIFSRHLEVMTDKYPDLVELIPKIRGEGVDSFIMEG 505
Query: 513 EIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRRE 572
E+VA DRE ++ FQTL+ RARK+V + I VDVC++AFD++Y NGQPLL R RRE
Sbjct: 506 EVVAVDRETGELKNFQTLTNRARKDVDIGSITVDVCMFAFDLMYLNGQPLLDRPFRERRE 565
Query: 573 HLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDR--------- 621
L F E P F + +L TS D + + +F AA D CEG+++K +D
Sbjct: 566 LLRSLFTEIPHHFTWVQSLDATSADSESVLEFFKAATDIKCEGIMVKILDNLPTVPYTEE 625
Query: 622 ------DAT--------------------------------------YEPSKRSLNWLKL 637
D T YEP KR +WLK+
Sbjct: 626 ADDDGPDGTNKLLTPKSKSKGKGKSKGKKDENGETKTKTRRKPLLATYEPDKRLDSWLKV 685
Query: 638 KKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEA-- 695
KKDY S D+LDL+P+A +HG+G++ + L+AC + +++CK +GF++A
Sbjct: 686 KKDYNSSF-DTLDLIPVAGWHGQGRKAKWWSPILMACRNEETGSLEAVCKCMSGFTDAFY 744
Query: 696 -----MLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
++ S K +P + PD+WFEP E
Sbjct: 745 KANRQFYDDGEESGEPKNTRTKQPAFVEYSGPRPDIWFEPQE 786
>gi|343473154|emb|CCD14886.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 535
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/465 (42%), Positives = 279/465 (60%), Gaps = 16/465 (3%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
+ VP+ ++ IS E R+ ++ N L V++ +P DL+PVVYL NK PAHEG
Sbjct: 71 DTVPYAAVADTLADISGEDSRLECIRLLSNFLVAVIQRSPNDLLPVVYLVMNKQGPAHEG 130
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELG+GDA ++K +AE CG TE+H K+ Y++ GDL VA++ + +QS + KP L+ V
Sbjct: 131 IELGVGDALLMKVVAECCGITEAHAKEAYRQTGDLAEVAQSKKRAQSTLVKPKRLSAVAV 190
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F R IA GKD+ ++ + IK LL A E ++R LQ KLR+GLAE ++LAA+G
Sbjct: 191 FQALRDIALMNGKDAARRRGDVIKRLLRDAVGPEVNLIVRALQQKLRVGLAETSVLAAVG 250
Query: 369 QAAVYNEQH-----SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL--- 420
A N S P +Q L A + ++ +P + ++ ALL G+ +
Sbjct: 251 YAFAMNHIGVGNILSLSPEQLQRELNVGATHFARTYNEVPRLDVVLGALLKHGLNVIIPS 310
Query: 421 -------SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
+ S PG+P+ P LA PT G+S I+N+F FT EYKYDGERAQIHY ++
Sbjct: 311 SPEAKAHAQALSVRPGLPVKPQLAHPTSGISVILNRFNGKSFTSEYKYDGERAQIHYTKE 370
Query: 474 GSVEIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLST 532
V+I+SRN+E NTGK+PD+V L +V SF++D E+VA D + FQ L
Sbjct: 371 KGVQIFSRNSETNTGKYPDIVSLLPEVFSSDTVDSFIIDSEVVAVDSVTGALQAFQVLQH 430
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
R RKNVS + + VC++AFDILY NG+PL+ + L RR+ L+ F FQFA L
Sbjct: 431 RGRKNVSSDSVTIPVCVFAFDILYFNGEPLMTKSLAQRRDVLHTHFRPIQARFQFAEHLD 490
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKL 637
S D+D+IQ FLD A+ EGL++KT++ +ATY P+KRS WLKL
Sbjct: 491 SNDVDDIQTFLDRAIKDGTEGLMVKTLEEEATYVPAKRSHFWLKL 535
>gi|19112137|ref|NP_595345.1| DNA ligase (predicted) [Schizosaccharomyces pombe 972h-]
gi|74698092|sp|Q9C1W9.1|DNLI3_SCHPO RecName: Full=DNA ligase 3; AltName: Full=DNA ligase III; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 3
gi|12311750|emb|CAC22607.1| DNA ligase (predicted) [Schizosaccharomyces pombe]
Length = 774
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 328/572 (57%), Gaps = 24/572 (4%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ F +IS+ RI I ++ N L T++ P+ L+ V+L N IAP G LG+G
Sbjct: 165 LANTFSLISSTKSRIRIVTLLTNFLLTLLYADPDSLIATVWLCTNSIAPNFYGKNLGVGP 224
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLI 315
A KAL E CG T S +K + + GD G VA ++ S + +P+PLTI KV+ T I
Sbjct: 225 AMYSKALKEVCGITASALKNLWNKYGDPGDVAFEAKVSVRTLSRPEPLTIKKVYSTLLKI 284
Query: 316 AKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY-- 373
A G +Q +K K LL+++ E +Y+ R + LRIG + T+LA+L +A
Sbjct: 285 ADSNGNGAQNRKLELTKFLLISSNAEEVRYIGRSIMQNLRIGAVQNTMLASLSKAFFIFD 344
Query: 374 --NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIP 431
NE + ++Q + +IVKQ F +P Y +V LL +G+ NL + S PGIP
Sbjct: 345 NQNEIFNFNSDSLQQQFRQGEEIVKQSFFQVPDYNILVATLLREGIENLKDNMSIRPGIP 404
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFP 491
+ PML TK + ++ + D F+CE+KYDG+RAQIH G+++I+SR+ E TG+FP
Sbjct: 405 VKPMLGSITKNLQHMLERLTDHNFSCEFKYDGQRAQIHCDRLGNIKIFSRHLEEITGRFP 464
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYA 551
DV+ V++L F+++ E+VA D+ +IL FQ LSTR RK V+++DI +DVC++
Sbjct: 465 DVI-EVAQLALKHSCDFIIEGELVAIDKSNGQILDFQKLSTRERKKVTVADITIDVCVFV 523
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASC 611
FDI++ +G+ LQ L RR ++ F P FQF ++L + + IQ+F A+ C
Sbjct: 524 FDIMFCDGKSCLQMPLIERRRMFFEHFNLIPNRFQFVSSLETNEEQSIQEFFSLAITNKC 583
Query: 612 EGLIIKTMDRD-----ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
EGL++K ++ +TYEP KR W+K+K+DY + +SLDLVPI A++G G++ G
Sbjct: 584 EGLMVKVLNGTNSKFPSTYEPDKRGEGWIKVKQDYDDEF-ESLDLVPIGAWYGNGRKAGW 642
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSS--SLRSKVIPKPRPYYRFADT--I 722
+ LLA Y+ + ++++CK +GFS+ +E + SL S +P Y F +T +
Sbjct: 643 FSPILLAVYNPDTGAYEAVCKCMSGFSDQFYKELTQKYSLESGN-SSLKPIYNFCETGKV 701
Query: 723 SPDVWFEPTERPETSNSPASIVYDSQITCLPS 754
+P ++F P E E + +QIT P+
Sbjct: 702 TPQIYFAPQEVWE--------IKGAQITSSPA 725
>gi|303316966|ref|XP_003068485.1| ATP-dependent DNA ligase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108166|gb|EER26340.1| ATP-dependent DNA ligase, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 877
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 214/610 (35%), Positives = 333/610 (54%), Gaps = 65/610 (10%)
Query: 180 KMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLA 238
K+ W +G + L+ F ++++ RI I DI+ N+LR ++E P+ L+P V+LA
Sbjct: 198 KLREFWNTEGGHASYSILARAFSLVNSTQSRIRIVDILVNLLRILIEGDPDSLLPAVWLA 257
Query: 239 ANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-M 297
N AP + LELG+G ++I KAL +A G +K Y + GD G VA ++ QS +
Sbjct: 258 TNAFAPPYVPLELGLGGSAISKALKKAYGLDNLGLKTLYDKYGDAGDVAYEAKKKQSFTL 317
Query: 298 RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRI 356
R+P PL+I V+D+ IA G SQE K+ ++ LL A E +Y++R L LRI
Sbjct: 318 RRPKPLSIKGVYDSLMKIANSKGTGSQENKQRLVEQLLRDARGAEESRYIVRTLVQHLRI 377
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPP-----------------NIQSPLEEAAKIVKQVF 399
G T+L AL +A +Y S+PP + S +A +++K +
Sbjct: 378 GAVRTTMLIALARAFLY----SRPPSASYRVRTNADLMKLKRDELASLYAKAEEMIKASY 433
Query: 400 SVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
+ P Y ++P LL G+ + C +P+ PML T+ ++E++ K Q +F+CE
Sbjct: 434 ARHPNYNDLIPCLLATGISEAVLAKCGLALHVPLLPMLGSITRDLTEMLTKLQGRKFSCE 493
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
YKYDG+RAQ+H G V ++SR+ E T K+PD+V V +++ V SFVL+ E+VA D
Sbjct: 494 YKYDGQRAQVHCDSSGKVSLFSRHLELMTDKYPDLVSLVPQIRGDGVSSFVLEGEVVAVD 553
Query: 519 REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
+E +LPFQTLS RA+KNV + DIK++VC++AFD++Y NG+ LL+ R RRE L F
Sbjct: 554 QESGVLLPFQTLSNRAKKNVEIGDIKINVCLFAFDLMYLNGEALLERPFRERRELLRSLF 613
Query: 579 EEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD-------------- 622
E P F + ++ TS + + I F A +A CEG+++K +D
Sbjct: 614 VEIPNRFSWVKSIDATSSESETILNFFQEATNAKCEGIMVKVLDDGTDGEAPGILTSEES 673
Query: 623 -----------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
+TYEP KR +WLK+KKDY + D+LDL+PIA +HG+G++
Sbjct: 674 SNISGEKQKGSRRRTLLSTYEPDKRLDSWLKVKKDYNAAF-DTLDLIPIAGWHGQGRKAQ 732
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTI 722
+ LLA + +++ K +GF++ + E+ + + IP+P Y + +
Sbjct: 733 WWSPILLAVRNPETGSLEAVTKCMSGFTDKFYQENKEKYAENSNNTIPRPS-YVEYRN-- 789
Query: 723 SPDVWFEPTE 732
P+VWFEP E
Sbjct: 790 EPEVWFEPQE 799
>gi|320038364|gb|EFW20300.1| DNA ligase [Coccidioides posadasii str. Silveira]
Length = 831
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 214/610 (35%), Positives = 333/610 (54%), Gaps = 65/610 (10%)
Query: 180 KMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLA 238
K+ W +G + L+ F ++++ RI I DI+ N+LR ++E P+ L+P V+LA
Sbjct: 152 KLREFWNTEGGHASYSILARAFSLVNSTQSRIRIVDILVNLLRILIEGDPDSLLPAVWLA 211
Query: 239 ANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-M 297
N AP + LELG+G ++I KAL +A G +K Y + GD G VA ++ QS +
Sbjct: 212 TNAFAPPYVPLELGLGGSAISKALKKAYGLDNLGLKTLYDKYGDAGDVAYEAKKKQSFTL 271
Query: 298 RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRI 356
R+P PL+I V+D+ IA G SQE K+ ++ LL A E +Y++R L LRI
Sbjct: 272 RRPKPLSIKGVYDSLMKIANSKGTGSQENKQRLVEQLLRDARGAEESRYIVRTLVQHLRI 331
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPP-----------------NIQSPLEEAAKIVKQVF 399
G T+L AL +A +Y S+PP + S +A +++K +
Sbjct: 332 GAVRTTMLIALARAFLY----SRPPSASYRVRTNADLMKLKRDELASLYAKAEEMIKASY 387
Query: 400 SVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
+ P Y ++P LL G+ + C +P+ PML T+ ++E++ K Q +F+CE
Sbjct: 388 ARHPNYNDLIPCLLATGISEAVLAKCGLALHVPLLPMLGSITRDLTEMLTKLQGRKFSCE 447
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
YKYDG+RAQ+H G V ++SR+ E T K+PD+V V +++ V SFVL+ E+VA D
Sbjct: 448 YKYDGQRAQVHCDSSGKVSLFSRHLELMTDKYPDLVSLVPQIRGDGVSSFVLEGEVVAVD 507
Query: 519 REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
+E +LPFQTLS RA+KNV + DIK++VC++AFD++Y NG+ LL+ R RRE L F
Sbjct: 508 QESGVLLPFQTLSNRAKKNVEIGDIKINVCLFAFDLMYLNGEALLERPFRERRELLRSLF 567
Query: 579 EEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD-------------- 622
E P F + ++ TS + + I F A +A CEG+++K +D
Sbjct: 568 VEIPNRFSWVKSIDATSSESETILNFFQEATNAKCEGIMVKVLDDGTDGEAPGILTSEES 627
Query: 623 -----------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
+TYEP KR +WLK+KKDY + D+LDL+PIA +HG+G++
Sbjct: 628 SNISGEKQKGSRRRTLLSTYEPDKRLDSWLKVKKDYNAAF-DTLDLIPIAGWHGQGRKAQ 686
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTI 722
+ LLA + +++ K +GF++ + E+ + + IP+P Y + +
Sbjct: 687 WWSPILLAVRNPETGSLEAVTKCMSGFTDKFYQENKEKYAENSNNTIPRPS-YVEYRN-- 743
Query: 723 SPDVWFEPTE 732
P+VWFEP E
Sbjct: 744 EPEVWFEPQE 753
>gi|261200583|ref|XP_002626692.1| DNA ligase I [Ajellomyces dermatitidis SLH14081]
gi|239593764|gb|EEQ76345.1| DNA ligase I [Ajellomyces dermatitidis SLH14081]
gi|239607362|gb|EEQ84349.1| DNA ligase I [Ajellomyces dermatitidis ER-3]
Length = 861
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 241/727 (33%), Positives = 370/727 (50%), Gaps = 91/727 (12%)
Query: 93 DTQTPKTTNSVVGEKIQ-EVAEEPSNDLVKP-ISNQIDNPIDSEK-----------ESQP 139
+ + P T+ + K+Q E EE S+ L P ++ + E E QP
Sbjct: 39 NAEAPSLTDEELARKLQAEWNEEASSGLQNPSVARDSLGSVSKEAKLEDRDPKFGLEPQP 98
Query: 140 TPPSPKKRKVN----VNSVSAKEKIAELKSNIVLLKKKAGEFDP-----KMVACWE-KGE 189
P SP ++ V S+ ++ S + + FDP ++ WE G
Sbjct: 99 QPLSPTDFTIDKAKSVLSLQTSSNDEDIISQSIPFDQSPLTFDPSDYLDQLRTHWEVDGG 158
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
+ P+ L+ F +++N R I D + N LR ++E P+ L P V+LA N IAP + L
Sbjct: 159 QAPYAILTRTFVLVNNTQSRNQIIDSLVNFLRVIIEADPDSLAPAVWLATNAIAPPYVPL 218
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-KASRSSQSMMRKPDPLTITKV 308
ELG+G ++I KAL A G +K Y + GD G VA +A + + +RKP PL+I V
Sbjct: 219 ELGLGGSAISKALKNAYGLNNQGLKILYDKHGDAGDVAFEAKKRQKFTLRKPKPLSIRGV 278
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAAL 367
+++ I+K G SQE K+ I+ LL E ++L+R L LRIG T+L AL
Sbjct: 279 YESLLKISKSKGPGSQETKQRIIEKLLQDTRGAEESRFLVRTLVQHLRIGAVRTTMLIAL 338
Query: 368 GQAAVYNE--------QHSKPPPNIQSP-----LEEAAKIVKQVFSVLPVYEKIVPALLT 414
+A +Y+ H + ++ A + VK F+ P Y+ +VP LL
Sbjct: 339 ARAFLYSRPATSSFTVHHRRDLAKLKKEELTGIYSRAEETVKACFARHPNYDDLVPCLLE 398
Query: 415 DGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
G+ + L C T IP+ PML T+ +++++ K Q FTCEYKYDG+RAQ+H
Sbjct: 399 IGISDELIVRCGLTLHIPLCPMLGSITRDLTQMLTKLQGRAFTCEYKYDGQRAQVHCDSS 458
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
G+V I+SR+ E T K+PD+V + +++ V SF+L+ EIVA ++E +IL FQTL+ R
Sbjct: 459 GTVSIFSRHLELMTDKYPDLVALIPKIRGEGVSSFILEGEIVAVNQETGEILAFQTLTNR 518
Query: 534 ARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL-- 591
A+KNV + IK+ VC++AFD+++ NG+PLL+ LR RRE L F E P F + +
Sbjct: 519 AKKNVGIDSIKISVCLFAFDLMFLNGEPLLERPLRERRELLRGLFIEVPHHFTWVKNIDV 578
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD----------------------------- 622
TS D + + F A DA CEGL++K +D D
Sbjct: 579 TSSDSEAVLSFFKDATDAKCEGLMVKLLDDDVVKPDLSKEESTAAPASTSKLPPTLTTVE 638
Query: 623 --------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
+TYEP KR +WLK+KKDY + D+LDL+PIAA+HG+G++ +
Sbjct: 639 PSGNAKSRGRRSLLSTYEPDKRLESWLKVKKDY-SAASDTLDLIPIAAWHGQGRKAKWWS 697
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTISPD 725
LLA + +++ K +GF++ + E+ + +I +P Y + + P+
Sbjct: 698 PILLAVRNPETGLLEAVTKCISGFTDKFYQANKEKYAEGSDNIITRP-AYVEYRN--EPE 754
Query: 726 VWFEPTE 732
VWFEP E
Sbjct: 755 VWFEPQE 761
>gi|119187513|ref|XP_001244363.1| hypothetical protein CIMG_03804 [Coccidioides immitis RS]
gi|392871089|gb|EAS32950.2| DNA ligase I, ATP-dependent (dnl1) [Coccidioides immitis RS]
Length = 831
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 213/610 (34%), Positives = 333/610 (54%), Gaps = 65/610 (10%)
Query: 180 KMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLA 238
K+ W +G + L+ F ++++ RI I DI+ N+LR ++E P+ L+P V+LA
Sbjct: 152 KLREFWNTEGGHASYSILARAFSLVNSTQSRIRIVDILVNLLRILIEGDPDSLLPAVWLA 211
Query: 239 ANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-M 297
N AP + LELG+G ++I KAL +A G +K Y + GD G VA ++ QS +
Sbjct: 212 TNAFAPPYVPLELGLGGSAISKALKKAYGLDNLGLKTLYDKYGDAGDVAYEAKKKQSFTL 271
Query: 298 RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRI 356
R+P PL+I V+D+ IA G SQE K+ ++ LL A E +Y++R L LRI
Sbjct: 272 RRPKPLSIKGVYDSLMKIANSKGTGSQENKQRLVEQLLRDARGAEESRYIVRTLVQHLRI 331
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPP-----------------NIQSPLEEAAKIVKQVF 399
G T+L AL +A +Y S+PP + S +A +++K +
Sbjct: 332 GAVRTTMLIALARAFLY----SRPPSASYRVHTNADLMKLKRDELASLYAKAEEMIKASY 387
Query: 400 SVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
+ P Y ++P LL G+ + C +P+ PML T+ ++E++ K Q +F+CE
Sbjct: 388 ARHPNYNDLIPCLLATGISEAVLAKCGLALHVPLLPMLGSITRDLTEMLTKLQGRKFSCE 447
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
YKYDG+RAQ+H G V ++SR+ E T K+PD+V V +++ V SF+L+ E+VA D
Sbjct: 448 YKYDGQRAQVHCDSSGKVSLFSRHLELMTDKYPDLVSLVPQIRGDGVSSFILEGEVVAVD 507
Query: 519 REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
+E +LPFQTLS RA+KNV + DIK++VC++AFD++Y NG+ LL+ R RRE L F
Sbjct: 508 QESGVLLPFQTLSNRAKKNVEIGDIKINVCLFAFDLMYLNGEALLERPFRERRELLRSLF 567
Query: 579 EEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD-------------- 622
E P F + ++ TS + + I F A +A CEG+++K +D
Sbjct: 568 VEIPNRFSWVKSIDATSSESETILNFFQEATNAKCEGIMVKVLDDGTDGEASGILTSEES 627
Query: 623 -----------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
+TYEP KR +WLK+KKDY + D+LDL+PIA +HG+G++
Sbjct: 628 SNISGEKQKASRRRTLLSTYEPDKRLDSWLKVKKDYNAAF-DTLDLIPIAGWHGQGRKAQ 686
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTI 722
+ LLA + +++ K +GF++ + E+ + + IP+P Y + +
Sbjct: 687 WWSPILLAVRNPETGSLEAVTKCMSGFTDKFYQENKEKYAENGNNTIPRPS-YVEYRN-- 743
Query: 723 SPDVWFEPTE 732
P+VWFEP E
Sbjct: 744 EPEVWFEPQE 753
>gi|425767386|gb|EKV05960.1| DNA ligase [Penicillium digitatum PHI26]
gi|425779691|gb|EKV17728.1| DNA ligase [Penicillium digitatum Pd1]
Length = 835
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 231/669 (34%), Positives = 347/669 (51%), Gaps = 88/669 (13%)
Query: 141 PPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVAC-----WE-KGERVPFI 194
P PKK +++ S + E L + L + FD A WE +G +
Sbjct: 94 PVMPKKSTLSLQSSAGTEDTVSLA---IPLDQSPQTFDASQYAAELRSHWEIEGGDASYA 150
Query: 195 FLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIG 254
L+ F + + T RI I D + N LR ++E P ++P V+LA N I+P ++ LELG+G
Sbjct: 151 LLTRAFVLANATTSRIKIVDTLVNFLRVLIEGDPSSVLPAVWLATNSISPPYDELELGLG 210
Query: 255 DASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFR 313
+SI KAL G +K Y + GD G VA ++ QS + KP PL I V+ + +
Sbjct: 211 GSSISKALKRIYGLNSQGIKTLYNKHGDAGDVAFEAKKRQSFTLMKPKPLRIKGVYQSLK 270
Query: 314 LIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
IA G SQE K+ ++ LL A E +Y++R L LRIG + T+L AL +A +
Sbjct: 271 KIATSKGPGSQETKQRIVEKLLQDARGAEESRYIVRTLVQNLRIGAVKTTMLIALARAVL 330
Query: 373 YNEQHSKP-------PPNIQSPLEE---------AAKIVKQVFSVLPVYEKIVPALLTDG 416
Y SKP P+ + L++ A + VK ++ P Y +VP LL G
Sbjct: 331 Y----SKPIGADFEVRPHQLAHLKKDELAEVYINAEETVKASYARHPSYNDLVPCLLEIG 386
Query: 417 VWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS 475
+ L C T IP+ PML T+ +SE++ K Q +F+CEYKYDG+RAQ+H E+G
Sbjct: 387 PTDELLVRCGLTMHIPLRPMLGSITRDLSEMLTKLQGRDFSCEYKYDGQRAQVHCDEEGK 446
Query: 476 VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
V I+SR+ E T K+PD+V V +++ V SF+L+ E+VA DRE + PFQ L+ RA+
Sbjct: 447 VSIFSRHLELMTEKYPDLVSLVPQIRGEGVSSFILEGEVVAVDRETGNLKPFQVLTNRAK 506
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TS 593
KNV + DIKV+VC++AFD++Y NG+PLL R RRE L F E P F + ++ TS
Sbjct: 507 KNVEIGDIKVNVCLFAFDLMYLNGEPLLDRPFRERRELLRSLFTEIPKHFGWVKSMDATS 566
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRD------------------------------- 622
D + + +F +A+D CEG+++K +D +
Sbjct: 567 ADSEPVLEFFKSAIDVKCEGIMVKLLDNERGTNPQANNLIFQEIAPTTTDQANQAASDPK 626
Query: 623 ----------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
+TYEP KR +WLK+KKDY S ++LDL+PIA +HG G++
Sbjct: 627 INPKPKEKSTRRKPLLSTYEPDKRLESWLKVKKDYSTS-SETLDLIPIAGWHGHGRKAKW 685
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTIS 723
+ LLA + +++ K +GF++ + E+ + + VI +P + +
Sbjct: 686 WSPILLAVRNPETGSLEAVTKCISGFTDKFYQSNKEKYAHGSTNVISRPSYVEYYGE--- 742
Query: 724 PDVWFEPTE 732
PDVWFEP E
Sbjct: 743 PDVWFEPCE 751
>gi|255936669|ref|XP_002559361.1| Pc13g09370 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583981|emb|CAP92006.1| Pc13g09370 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 833
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 222/633 (35%), Positives = 338/633 (53%), Gaps = 82/633 (12%)
Query: 174 AGEFDPKMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV 232
A ++ +M + W +G + L+ F + + T RI I D + N LR ++E P ++
Sbjct: 129 ASQYAAEMRSHWATEGGDASYALLTRAFVLANATTSRIRIVDTLVNFLRVLIEGDPSSVL 188
Query: 233 PVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRS 292
P V+LA N I+P ++ LELG+G +SI KAL + G +K Y + GD G VA ++
Sbjct: 189 PAVWLATNSISPPYDELELGLGGSSISKALKKIYGLNNQGLKTLYDKHGDAGDVAFEAKK 248
Query: 293 SQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLL 350
QS + KP PL I V+ + + IA G SQE K+ ++ LL A E +Y++R L
Sbjct: 249 RQSFTLVKPKPLRIKGVYQSLKKIATSKGPGSQETKQRIVEKLLQDARGAEESRYIVRTL 308
Query: 351 QSKLRIGLAEQTLLAALGQAAVYNEQHSKP--------PPNIQSPLEE---------AAK 393
LRIG + T+L AL +A +Y SKP PPN + L++ A +
Sbjct: 309 VQNLRIGAVKTTMLIALARAVLY----SKPVGADFEVRPPNQLARLKKDELAEIYSSAEE 364
Query: 394 IVKQVFSVLPVYEKIVPALLTDG-VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
IVK ++ P Y +VP LL G L C + IP+ PML T+ +SE++ K Q
Sbjct: 365 IVKASYARHPNYNDLVPCLLEIGPTEELLIRCGLSMHIPLRPMLGSITRDLSEMLTKLQG 424
Query: 453 MEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDC 512
+F+CEYKYDG+RAQ+H E G+V I+SR+ E T K+PD+V V +++ V SF+L+
Sbjct: 425 RDFSCEYKYDGQRAQVHCDEQGTVSIFSRHLELMTEKYPDLVSLVPQIRGEGVSSFILEG 484
Query: 513 EIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRRE 572
E+VA DRE + PFQ L+ RA+KNV + DIKV+VC++AFD++Y NG+PLL R RRE
Sbjct: 485 EVVAVDRETGDLKPFQVLTNRAKKNVEIGDIKVNVCLFAFDLMYLNGEPLLDRPFRERRE 544
Query: 573 HLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD-------- 622
L F E P F + ++ TS D + + +F +A+D CEG+++K +D
Sbjct: 545 LLRSLFVEIPRHFGWVKSMDATSADSESVLEFFKSAIDVKCEGIMVKLLDNKPSANTQQV 604
Query: 623 ----------------------------------------ATYEPSKRSLNWLKLKKDYI 642
+TYEP KR +WLK+KKDY
Sbjct: 605 NNKLSDEIAAITTEQPNQAIYDPITNPNPKAKPTRRKPLLSTYEPDKRLESWLKVKKDYS 664
Query: 643 ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---E 699
S ++LDL+PIA +HG+G++ + L+A + +++ K +GF++ + E
Sbjct: 665 TS-SETLDLIPIAGWHGQGRKAKWWSPILMAVRNPETGSLEAVTKCMSGFTDKFYQSNKE 723
Query: 700 RSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
+ + + VI +P Y + PDVWF+P+E
Sbjct: 724 KYAQGSTNVISRPS-YIEYPG--EPDVWFDPSE 753
>gi|218188863|gb|EEC71290.1| hypothetical protein OsI_03304 [Oryza sativa Indica Group]
Length = 1226
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 186/462 (40%), Positives = 291/462 (62%), Gaps = 20/462 (4%)
Query: 257 SIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIA 316
SI ++ EA G + S + + Y+ GDLG VA+ R +Q ++ P PL+I VF T R ++
Sbjct: 594 SIYRSSMEALGSSRSKIHEMYKTFGDLGDVAQECRQNQMLLAPPRPLSIRDVFSTLRKLS 653
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
AG S ++K + L+ + + E ++L+R L LRIG+ +T+L AL A V + +
Sbjct: 654 GIAGSGSTGRRKILVLHLIRSCREMEMKFLVRTLVRNLRIGVMMKTILPALAHAVVIDGK 713
Query: 377 HSKPP----PNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
+S P I+ L+E + V + ++V+P + ++P+LL +G +++ + G PI
Sbjct: 714 YSNSPVLSLEGIKPQLQELSTEVAEAYNVIPNLDLLIPSLLREGTAFSASSLAMITGTPI 773
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
PMLA+ T G+++ + F FTCEYKYDG+RAQIH DGSV+I+SR + +T +FPD
Sbjct: 774 PPMLARITNGLTQSLKLFNGRAFTCEYKYDGQRAQIHRSNDGSVQIFSRQMKESTSRFPD 833
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREK-QKILPFQTLSTRAR----KNVSLSDIKVDV 547
+V + L V SF+LD E+V DR+K K++ FQ LS+R R ++++ +IKVD+
Sbjct: 834 LVGMIKELCSIEVSSFILDAEVVGIDRKKGNKLMSFQELSSRERGSKHSSIAIQNIKVDI 893
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT------SID----LD 597
C++ FDI++ NGQ LL LR RR++++D F+E+PG F+ A LT S+D L+
Sbjct: 894 CVFVFDIMFCNGQSLLNCSLRQRRKYIHDLFQEKPGHFELAQQLTVEADEASVDNSTTLE 953
Query: 598 EIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAF 657
+ F A +SCEG+++K +D DA Y SKR +WLK+K+DY+ +GDSLDLVPI A+
Sbjct: 954 RMNTFFKMACQSSCEGIMLKILDVDAGYSASKRCDSWLKVKRDYV-GLGDSLDLVPIGAW 1012
Query: 658 HGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
+G G++ G Y FL+ACY+ EEFQS+C++ +GFS+ +E
Sbjct: 1013 YGNGRKAGWYSPFLMACYNPEYEEFQSVCRVMSGFSDEFYKE 1054
>gi|380472728|emb|CCF46636.1| DNA ligase I [Colletotrichum higginsianum]
Length = 873
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 234/679 (34%), Positives = 351/679 (51%), Gaps = 95/679 (13%)
Query: 141 PPSPKKRKVNVNSVSAKEKIAELKSNIVL----LKKKAGEFDPKMVACW-EKGERVPFIF 195
P +PKK ++++SV+ E I + + I L L EF P++ W +G + F
Sbjct: 125 PDAPKKNTLSLSSVANAEDI--VATAIPLDQSPLTFDPSEFVPQLKKHWASEGGHASYAF 182
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ F +++ RI I D + N +R ++E PE L+P V+LA N I+P + LELG+G
Sbjct: 183 LTRCFILVNATQSRIKIVDTLVNCIRVLIEADPESLLPAVWLATNAISPPYISLELGLGG 242
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRL 314
++I KAL + CG +K Y + GD G VA ++ QS +RKP PLTI V+ +
Sbjct: 243 SAISKALKQVCGLDSRALKTIYDKYGDAGDVAFEAKKKQSFTLRKPKPLTIKAVYQSLVK 302
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVY 373
IA G+ S E K+ + LL A E +Y++R L LRIG + T+L AL +A +
Sbjct: 303 IANSQGQGSGEAKQKIVDRLLQDARGGEESRYIVRTLCQHLRIGAVKTTMLIALSRAFLL 362
Query: 374 NEQHSKPPPNIQSPL-----------EEAAKI-------VKQVFSVLPVYEKIVPALLTD 415
+ PP + L EE A++ VK F+ P Y +VP LL
Sbjct: 363 SR-----PPGAEFSLRSTKDLQRLKKEELAEVWSRPEEVVKACFARRPNYNDLVPVLLEI 417
Query: 416 GVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
G+ + L C T IP+ PML T+ +SE++ K Q +F CE+KYDG+RAQIH E+G
Sbjct: 418 GICDELLLRCGLTLHIPLRPMLGSITRDLSEMLTKLQGRDFACEFKYDGQRAQIHCDEEG 477
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
V I+SR+ E T K+PD+V + +++ V SF+++ E+VA D E ++ FQTLS RA
Sbjct: 478 KVTIFSRHLELMTEKYPDLVALMPKIRGEGVDSFIMEGEVVAVDSETGELKNFQTLSNRA 537
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--T 592
RK+V++ ++V+VC++AFD+++ NGQPLL R RRE L F E P F + TL T
Sbjct: 538 RKDVAIGSVQVNVCMFAFDLMFLNGQPLLDRPFRERRELLRSMFIEIPHQFTWVRTLDAT 597
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDR----------------DAT------------ 624
S D D + +F AA D CEG+++K +D D T
Sbjct: 598 SQDSDAVLEFFKAATDIKCEGIMVKILDNLTDVPYQANEAGEADGDVTEEPRTPSKSKSK 657
Query: 625 -----------------------YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
YEP KR +WLK+KKDY S D+LD++P+AA+HG G
Sbjct: 658 GKSDKDENGGVKKKGRRKPLLATYEPDKRLDSWLKVKKDYNASF-DTLDMIPVAAWHGSG 716
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERS--------SSLRSKVIPKPR 713
++ + L+A + + +++CK +GF++A + + K +
Sbjct: 717 RKAKWWSPILMAVRNEDTGSLEAVCKCMSGFTDAFYKANREFYDDGELNGGEKKNTRAQK 776
Query: 714 PYYRFADTISPDVWFEPTE 732
P + PDVWFEP E
Sbjct: 777 PAFIEYSGPGPDVWFEPQE 795
>gi|315055651|ref|XP_003177200.1| DNA ligase [Arthroderma gypseum CBS 118893]
gi|311339046|gb|EFQ98248.1| DNA ligase [Arthroderma gypseum CBS 118893]
Length = 844
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 220/635 (34%), Positives = 333/635 (52%), Gaps = 86/635 (13%)
Query: 176 EFDP-----KMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE 229
EFDP + A WE +G + + L+ F +++ RI I DI+ N+LR ++ P+
Sbjct: 145 EFDPHEQKENLQAHWEAEGGKASYAILARAFSLVNGTQSRIKIVDILVNVLRLIIVGDPQ 204
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA 289
L+P V+LA N AP + +ELG+G ++I KAL +A G +K Y + GD G VA
Sbjct: 205 SLLPAVWLATNAFAPPYVPIELGLGGSAISKALKKAYGLDNQGLKSLYNKHGDAGDVAFE 264
Query: 290 SRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLI 347
++ QS +R+P PLTI V+D IA G SQE K+ ++ LL E +Y++
Sbjct: 265 AKKKQSFTLRRPKPLTIRSVYDALMKIANSKGTGSQEAKQRIVEKLLQDTRGAEESRYIV 324
Query: 348 RLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP-----------------NIQSPLEE 390
R L LRIG + T+L AL +A +Y SKPP + S +
Sbjct: 325 RTLVQHLRIGAVKTTILIALARAFLY----SKPPTATFSIRSRAEFTSLSKEELSSIYSQ 380
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGV-WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
A + +K ++ P Y IVP LL +GV L C T IP+ PML T+ + +++ +
Sbjct: 381 AEETIKTCYARHPNYNMIVPCLLENGVSAELLTKCGITLHIPLLPMLGSITRDLPQMLTR 440
Query: 450 FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
FTCEYKYDG+RAQ+H G V I+SR+ E T K+PD+V V +++ +V SF+
Sbjct: 441 LHGRSFTCEYKYDGQRAQVHCDALGKVSIFSRHLELMTDKYPDLVSLVPQIRSGAVSSFI 500
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
L+ E+VA + E ++LPFQTL+ RA+KNV + DIKV+VC+++FD++Y NGQ LL+ R
Sbjct: 501 LEGEVVAVNNETGELLPFQTLTNRAKKNVEIGDIKVNVCLFSFDLMYLNGQSLLERPFRE 560
Query: 570 RREHLYDSFEEEPGFFQFATTLTSI--DLDEIQKFLDAAVDASCEGLIIKTMDRD----- 622
RRE L F E P F + ++ + D D F + A+ A CEG+++K +D
Sbjct: 561 RREFLRSLFIEIPNRFTWVKSIDAFPSDSDAALNFFNDALQAKCEGIMVKVLDDKPVESL 620
Query: 623 ------------------------------------------ATYEPSKRSLNWLKLKKD 640
+TYEP KR +WLK+KKD
Sbjct: 621 IQAEGAATVPDNAEILSLETDQPQASTDTVAKQRGGRKRPLLSTYEPDKRLESWLKVKKD 680
Query: 641 YIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE-- 698
Y S ++LDL+PI A+HG+G++ + LLA + +++ K +GFS+ E
Sbjct: 681 YSAS-SETLDLIPIGAWHGQGRKAKWWSPILLAVRNPETGSLEAVTKCMSGFSDKFYEAS 739
Query: 699 -ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
E+ + +I +P Y ++ P+VWF+P E
Sbjct: 740 KEKYAEGGDNIISRPN-YVEYSG--EPEVWFQPQE 771
>gi|403364898|gb|EJY82225.1| DNA ligase 1 [Oxytricha trifallax]
Length = 630
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/546 (37%), Positives = 310/546 (56%), Gaps = 58/546 (10%)
Query: 210 ILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRT 269
I I +I+ N+ R+ + PE+LV + Y A K+ P +E E GIG + A+A+ACG++
Sbjct: 76 ICIKEIISNVFRSCILLAPEELVDIFYFFAVKLGPDYETNETGIGLELLSNAVAKACGKS 135
Query: 270 ESHVKKQYQEMGDLGLVAKASRSSQSMM---------RKPDPLTITKVFDTFRLIAKEAG 320
+++QY+ GD GLV + + +Q + KP PLT KVF++F I+K +G
Sbjct: 136 VKQIREQYKAEGDYGLVVEKGKGAQKSLGNFFKKQEVAKPKPLTFNKVFESFLRISKISG 195
Query: 321 KDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKP 380
+SQ +K+ I LL A++ E +Y++R LQ L+ G AE+T L+AL +A Y +S P
Sbjct: 196 NNSQAEKEAIILKLLQEASNEEAKYIVRWLQKNLKTGAAEKTYLSALARAIAYTPPNSNP 255
Query: 381 PP-NIQSPLEEAAKI---------VKQVFSVLPVYEKIVPALLT--DGVWNLSNTCSFTP 428
N++ +++ + + P Y +++ LL D + L C
Sbjct: 256 KIINLRITMQDYQFYQRCDFLEFGINEAICEFPNYGEVIRTLLVVGDDMKKLKQQCHIRL 315
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS---VEIYSRNAER 485
GIP+ PMLAKPTKGV E++++ + +FTCEYKYDG R QIH+ + V+IYSRN E
Sbjct: 316 GIPVKPMLAKPTKGVREVLDRMEQCKFTCEYKYDGFRGQIHFDRSNTEKQVQIYSRNLEI 375
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV 545
T ++PDVV F+L + R+RKNV+ D+K
Sbjct: 376 MTHQYPDVV------------EFIL--------------------TQRSRKNVTEEDLKT 403
Query: 546 DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDA 605
+C+ AFD+LY NG LL+E RR ++ + +E FA + ++ I++FL+
Sbjct: 404 KICVCAFDLLYLNGNSLLKENFLTRRTLMHSNIKETHPQLIFAKYKDADAVESIEEFLNE 463
Query: 606 AVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES-IGDSLDLVPIAAFHGRGKRT 664
+V SCEGL++KT++ +ATYEPSKRSLNWLKLKKDY+++ GDSLDLV + A +G+GKR
Sbjct: 464 SVKDSCEGLMVKTLENNATYEPSKRSLNWLKLKKDYLDTGFGDSLDLVVVGADYGKGKRA 523
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
G+YG+FL+ACYD N E Q+I + +G ++ ++ LR I KP + D
Sbjct: 524 GIYGSFLMACYDENLETLQTITMMASGITDDQMQMFYQLLRGTEIDKPSSILKCKDK-QV 582
Query: 725 DVWFEP 730
VWF+P
Sbjct: 583 HVWFQP 588
>gi|326476459|gb|EGE00469.1| DNA ligase I [Trichophyton tonsurans CBS 112818]
Length = 844
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 247/785 (31%), Positives = 387/785 (49%), Gaps = 109/785 (13%)
Query: 43 LSSSLNPRRKMSSSAP----NAFQVLMSAAAKKKPSPQPNSSSSSSSPKK-RRTLDTQTP 97
++ +L +RK+ S+ P + A +K K P P + + ++ R L T+
Sbjct: 1 MAGALKKKRKVDSTGPPQNTRSIASYFGAGSKAKSQPIPRTEHDQLTDEQLARKLQTEWN 60
Query: 98 KTT-----NSVVGEKIQEVAEEP---SNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKV 149
K + +S G + E +E ++D V S+ I EK S P P+ RK
Sbjct: 61 KKSQDESGSSTPGHRATETLQEEKPRASDEVADASSSI------EKGSLPDTPTLTPRKE 114
Query: 150 N----VNSVSAKEKIAELKSNIVLLKKKAGEFDPK-----MVACWE-KGERVPFIFLSLV 199
N + S+ + + S + EFDP + A W+ +G + + L+
Sbjct: 115 NKPRGILSLQSSSMAEDTISFSLPFDLSPLEFDPHEQKEILQAHWDAEGGKASYAILARA 174
Query: 200 FDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASII 259
F +++ RI I DI+ N+LR ++ P+ L+P V+LA N AP + ELG+G ++I
Sbjct: 175 FSLVNGTQSRIKIVDILVNVLRLIIVGDPQSLLPAVWLATNAFAPPYVPTELGLGGSAIS 234
Query: 260 KALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKE 318
KAL A G +K Y + GD G VA ++ QS +R+P PLTI V+D IA
Sbjct: 235 KALKRAYGLDNQGLKSLYNKHGDAGDVAFEAKKKQSFTLRRPKPLTIRSVYDALMKIANS 294
Query: 319 AGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH 377
G SQE K+ ++ LL E +Y++R L LRIG + T+L +L +A +Y
Sbjct: 295 KGTGSQETKQRIVEKLLQDTRGAEESRYIVRTLVQHLRIGAVKTTILISLARAFLY---- 350
Query: 378 SKPPP-----------------NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGV-WN 419
SKPP + S +A +K ++ P Y IVP LL +GV
Sbjct: 351 SKPPAATFPIRSRAELMSLSKEELSSIYSQAEDTIKACYARHPNYNMIVPCLLENGVSAE 410
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
L C T +P+ PML T+ + +++ + FTCEYKYDG+RAQ+H G V I+
Sbjct: 411 LLTKCGITLHVPLLPMLGSITRDLPQMLTRLHGRSFTCEYKYDGQRAQVHCDAAGKVSIF 470
Query: 480 SRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVS 539
SR+ E T K+PD+V V +++ +V SF+++ E+VA + E ++LPFQTL+ RA+KNV
Sbjct: 471 SRHLELMTDKYPDLVSLVPQIRSGAVSSFIMEGEVVAVNNETGELLPFQTLTNRAKKNVE 530
Query: 540 LSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI--DLD 597
+ IKV+VC+++FD++Y NGQPLL R RRE L F E P F + ++ + D D
Sbjct: 531 IGSIKVNVCLFSFDLMYLNGQPLLNRTFRERRELLRSLFVEIPNRFTWVKSIDAFPSDSD 590
Query: 598 EIQKFLDAAVDASCEGLIIKTMDRD----------------------------------- 622
+ F + A+ CEG+++K +D
Sbjct: 591 AVLNFFNDALQVKCEGIMVKVLDDKPVDLPLQVEDTATALGDGELLPPEEDQQQEPTDTT 650
Query: 623 ------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
+TYEP KR +WLK+KKDY S ++LDL+PIAA+HG+G++ +
Sbjct: 651 EKQRGNRKRPLLSTYEPDKRLESWLKVKKDYSTS-SETLDLIPIAAWHGQGRKAKWWSPI 709
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTISPDVW 727
LLA + +++ K +GF++ E E+ + +I +P Y + P+VW
Sbjct: 710 LLAVRNPETGSLEAVTKCMSGFTDKFYEANKEKYAEGSDNIISRPS-YVEYCG--EPEVW 766
Query: 728 FEPTE 732
F+P E
Sbjct: 767 FQPQE 771
>gi|327307100|ref|XP_003238241.1| DNA ligase I [Trichophyton rubrum CBS 118892]
gi|326458497|gb|EGD83950.1| DNA ligase I [Trichophyton rubrum CBS 118892]
Length = 843
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 217/635 (34%), Positives = 332/635 (52%), Gaps = 86/635 (13%)
Query: 176 EFDP-----KMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE 229
EFDP K+ A W+ +G + + L+ F +++ RI I DI+ N+LR ++ P+
Sbjct: 144 EFDPHEQKEKLQAHWDAEGGKASYAILARAFSLVNGTQSRIKIVDILVNVLRLIIVGDPQ 203
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA 289
L+P V+LA N AP + +ELG+G ++I KAL A G +K Y + GD G VA
Sbjct: 204 SLLPAVWLATNAFAPPYVPIELGLGGSAISKALKRAYGLDNQGLKSLYNKHGDAGDVAFE 263
Query: 290 SRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLI 347
++ QS +R+P PLTI V+D IA G SQE K+ ++ LL E +Y++
Sbjct: 264 AKKKQSFTLRRPKPLTIRSVYDALMKIANSKGTGSQETKQRIVEKLLQDTRGAEESRYIV 323
Query: 348 RLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP-----------------NIQSPLEE 390
R L LRIG + T+L AL +A +Y SKPP ++ S +
Sbjct: 324 RTLVQHLRIGAVKTTILIALARAFLY----SKPPAATFPIRSRAELMSLSKEDLSSIYSQ 379
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGV-WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
A + +K ++ P Y IVP LL +GV L C T +P+ PML T+ + +++ +
Sbjct: 380 AEETIKACYARHPNYNMIVPCLLENGVSAELLTKCGITLHVPLLPMLGSITRDLPQMLTR 439
Query: 450 FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
FTCEYKYDG+RAQ+H G V I+SR+ E T K+PD+V V ++ +V SF+
Sbjct: 440 LHGRSFTCEYKYDGQRAQVHCDAAGKVSIFSRHLELMTDKYPDLVSLVPEIRSGTVSSFI 499
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
++ E+VA + E ++LPFQTL+ RA+KNV + IKV+VC+++FD++Y NGQPLL R
Sbjct: 500 MEGEVVAVNNETGELLPFQTLTNRAKKNVEIGSIKVNVCLFSFDLMYLNGQPLLDRTFRE 559
Query: 570 RREHLYDSFEEEPGFFQFATTLTSI--DLDEIQKFLDAAVDASCEGLIIKTMDRD----- 622
RRE L F E P F + ++ + D D + F + A+ CEG+++K +D
Sbjct: 560 RRELLRSLFVEIPNRFTWVKSIDAFPSDSDAVLNFFNDALQVKCEGIMVKVLDDKPVDRL 619
Query: 623 ------------------------------------------ATYEPSKRSLNWLKLKKD 640
+TYEP KR +WLK+KKD
Sbjct: 620 LQAADTAAALGDGELLPPEEDQQQESTDTAEKQRGNRKRPLLSTYEPDKRLESWLKVKKD 679
Query: 641 YIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE-- 698
Y S ++LDL+PIAA+HG+G++ + LLA + +++ K +GF++ E
Sbjct: 680 YSAS-SETLDLIPIAAWHGQGRKAKWWSPILLAVRNPETGSLEAVTKCMSGFTDKFYEAN 738
Query: 699 -ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
E+ + +I +P Y + P+VWF+P E
Sbjct: 739 KEKYAEGSDNIISRPS-YVEYCG--EPEVWFQPQE 770
>gi|452821973|gb|EME28997.1| DNA ligase 1 [Galdieria sulphuraria]
Length = 671
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 207/563 (36%), Positives = 327/563 (58%), Gaps = 31/563 (5%)
Query: 192 PFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLEL 251
PF +++ D++ + R+ +I+ ++ ++ P+DL+P VYL N++A E +EL
Sbjct: 103 PFQAVAITLDILQATSSRLSSIEILSDLFLAILLKYPQDLLPAVYLCTNRVAAPWEAVEL 162
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDT 311
G+G + I KA+ E ++ ++ Y++ GDLG VA+ S + KP+ LT V+ +
Sbjct: 163 GVGGSLISKAIMEVTSVSKETLRSLYKQYGDLGDVAQICCSRLQRLFKPNYLTAQHVYQS 222
Query: 312 FRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAA 371
R IA+ G S +KKN I++LLVA+ E +Y++R+L +R+G E+T++AALG+A
Sbjct: 223 LRKIAQTNGVKSVSRKKNLIQSLLVASRSPEARYIVRILSQHIRVGAVEKTVIAALGRAF 282
Query: 372 VYNEQHSKPPPNIQSPLE----------EAAKIVKQV---FSVLPVYEKIVPALLTD-GV 417
+ + I S + E +V+++ FS +E+I+ L+ D
Sbjct: 283 IILDAIRSNGEEITSRAQVQKYSIERKTETKLLVERMNRAFSECSDWERIITFLVNDTHS 342
Query: 418 WN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF-QDMEFTCEYKYDGERAQIHYLEDGS 475
WN L+ C PG P+ P L K TK V E++ D + +CE+KYDG+R Q+H +E+G
Sbjct: 343 WNQLNEFCKLQPGTPLKPQLGKITKSVDEMIKDLGTDSDISCEWKYDGQRCQVHIIENGV 402
Query: 476 VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD-REKQKILPFQTLSTRA 534
V+++SR+ E T K+PDVV + + + V S +LD EIVA + Q LPFQ LSTRA
Sbjct: 403 VQLFSRHLEDMTSKYPDVVSSFADIS--GVTSAILDAEIVAVNPSHSQMYLPFQYLSTRA 460
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI 594
RK+V L+ I V V + FD+++ NG L+++ R RR+ L F TL S
Sbjct: 461 RKDVQLNQITVQVRVIVFDLMFLNGVCLIEQSFRQRRQLLERHFRVRS--VTLPETLISS 518
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
++E++ +L+ A+ CEGL+ K +D ++ Y PSKRS W K+KKDY+E I D++DLVP
Sbjct: 519 QVNEVEAWLNRAISNGCEGLMCKALDGPNSVYYPSKRSEGWSKIKKDYVEGISDTMDLVP 578
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSS----SLRSKVI 709
IAA+ G G++ G FLLACY + EFQS+CK+ +GFS+ EE S LR K +
Sbjct: 579 IAAWWGNGRKAGWLSPFLLACY--YDGEFQSVCKVMSGFSD---EEYKSLTEFYLRDKTL 633
Query: 710 PKPRPYYRFADTISPDVWFEPTE 732
P PYY+ +++ P +W + +
Sbjct: 634 PIKPPYYQVDESLRPAIWLQACQ 656
>gi|83033053|ref|XP_729309.1| DNA ligase 1 [Plasmodium yoelii yoelii 17XNL]
gi|23486709|gb|EAA20874.1| DNA ligase 1 [Plasmodium yoelii yoelii]
Length = 826
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 166/338 (49%), Positives = 238/338 (70%), Gaps = 1/338 (0%)
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ 451
K VK LP E I+ LL+ N L C+ G+P+ PMLAKPTKG+ E++++F
Sbjct: 408 KSVKSALCELPNIEMIIQNLLSGDDMNVLMKKCTVKTGVPVQPMLAKPTKGIQEVLDRFN 467
Query: 452 DMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLD 511
++ FTCEYKYDGERAQIHY++ +++I+SRN E T K+PDV+ V P V ++D
Sbjct: 468 NVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQIVKDQIMPGVTESIID 527
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
E+VAYD E +KILPFQ L+TR RK+V + +IKV +C++ FD++ NG P+++E L +RR
Sbjct: 528 SEVVAYDIENKKILPFQILTTRKRKDVDIENIKVKICLFPFDLICCNGVPVIKEPLEIRR 587
Query: 572 EHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRS 631
+ LY + G ++AT ++D+I FL A++ +CEGL++KT+ +A+YEPS+RS
Sbjct: 588 KLLYSLLRCKEGVLEYATHSEMNNIDDIDIFLQDAIENNCEGLMVKTLLDNASYEPSRRS 647
Query: 632 LNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTG 691
LNWLK+KKDYIE + DS+DLVPIA ++G+GKR+GVYGAF+LA Y+S E FQ++CK GTG
Sbjct: 648 LNWLKVKKDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLAAYNSETENFQTVCKAGTG 707
Query: 692 FSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
FS+ +L SL K+IP + YY +D ++PDVWF+
Sbjct: 708 FSDEILNALHESLSDKIIPNKKSYYEVSDKLNPDVWFD 745
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 193 FIFLSLVFDMISNETG-----RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE 247
F FL+ F+ I G + + I+ N+ R ++ +P DL+P VY+ NK+AP ++
Sbjct: 99 FTFLTNTFNQIEELKGSGAGSKKNVAIILSNVFRVLIYYSPNDLIPAVYITLNKVAPDYQ 158
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP---LT 304
+E G+G+A I+K ++EA RTE+ +KK Q++ DLG++A+ S MR P LT
Sbjct: 159 NVEAGVGEALILKTMSEAYSRTEASIKKDLQQIEDLGIIAE---SCSCKMRTIFPLPRLT 215
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I VF+ + I +G +SQ+KK+ IK LLV+A E +Y++R LQ +LRIG+ T+L
Sbjct: 216 IQSVFNELKSIPNISGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVL 275
Query: 365 AALGQAAV 372
AL A V
Sbjct: 276 QALAYAFV 283
>gi|68070421|ref|XP_677122.1| DNA ligase 1 [Plasmodium berghei strain ANKA]
gi|56497113|emb|CAH97995.1| DNA ligase 1, putative [Plasmodium berghei]
Length = 897
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 167/343 (48%), Positives = 240/343 (69%), Gaps = 1/343 (0%)
Query: 388 LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEI 446
E K VK LP E I+ LL+ N L C+ G+P+ PMLAKPTKG+ E+
Sbjct: 474 FECMEKSVKSALCELPNIEMIIQNLLSGDDMNVLMKKCTVKTGVPVQPMLAKPTKGIQEV 533
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
+++F ++ FTCEYKYDGERAQIHY++ +++I+SRN E T K+PDV+ V P V
Sbjct: 534 LDRFNNVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQIVKDQIMPGVT 593
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
++D E+VAYD E +KILPFQ L+TR RK+V + +IKV +C++ FD++ NG P+++E
Sbjct: 594 ESIIDSEVVAYDIENKKILPFQILTTRKRKDVDIENIKVKICLFPFDLICCNGIPVIKEP 653
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYE 626
L +RR+ LY + + G ++AT ++D+I FL A++ +CEGL++KT+ +A+YE
Sbjct: 654 LEIRRKLLYSLLKCKEGVLEYATHSEMNNIDDIDIFLQDAIENNCEGLMVKTLLDNASYE 713
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
PS+RSLNWLK+KKDYIE + DS+DLVPIA ++G+GKR+GVYGAF+LA Y+S E FQ++C
Sbjct: 714 PSRRSLNWLKVKKDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLAAYNSETENFQTVC 773
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
K GTGFS+ +L SL K+IP + YY +D ++PDVWF+
Sbjct: 774 KAGTGFSDEILNALHESLSDKIIPNKKSYYEVSDKLNPDVWFD 816
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 114/187 (60%), Gaps = 10/187 (5%)
Query: 193 FIFLSLVFDMISNETG-----RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE 247
F FL+ F+ I G + + I+ N+ R ++ +P DL+P VY+ NK+AP ++
Sbjct: 171 FTFLTNTFNQIEELKGSGAGSKKNVAIILSNVFRVLIYYSPNDLIPAVYITLNKVAPDYQ 230
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRK--PDPLTI 305
+E G+G+A I+K ++EA RTE+ +KK Q++ DLG++A+ S MR P PLTI
Sbjct: 231 NVEAGVGEALILKTMSEAYSRTETSIKKDLQQIEDLGIIAE---SCSCKMRTIFPLPLTI 287
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
VF+ + I +G +SQ+KK+ IK LLV+A E +Y++R LQ +LRIG+ T+L
Sbjct: 288 QSVFNELKSIPNISGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVLQ 347
Query: 366 ALGQAAV 372
AL A V
Sbjct: 348 ALAYAFV 354
>gi|340966872|gb|EGS22379.1| DNA ligase-like protein [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 837
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 214/622 (34%), Positives = 324/622 (52%), Gaps = 85/622 (13%)
Query: 179 PKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLA 238
P ++ W P+ L+ F +++N RI I D + N LR ++E P+ L+P V+L+
Sbjct: 152 PGLLPSWTSESGAPYALLTRCFTLVNNTQSRIKIVDTLTNTLRLLIEGDPDSLLPAVWLS 211
Query: 239 ANKIAPAH-EGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-KASRSSQSM 296
N IAP +G+ELGIG A+I KAL ACG +K Y ++GD G VA +A +
Sbjct: 212 TNAIAPPWVQGMELGIGGAAISKALKTACGLDNRALKALYDKVGDAGDVAFEAKKKGGFT 271
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
RKP PLTI V+ + IAK G S E K+ + RLLQ R
Sbjct: 272 FRKPKPLTIKGVYQSLVKIAKAQGPGSGETKQRIVD---------------RLLQDA-RG 315
Query: 357 GLAEQTLLAALGQAAVYNEQHSK------PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVP 410
G + L ++ A YN +++ ++ + + ++K +F+ P Y ++P
Sbjct: 316 GEESRAFLLSIPPNASYNVPYTQEELRKLKKDSLAAIYAKTETLLKTLFARHPDYNALIP 375
Query: 411 ALLTDGVWN---LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQ 467
ALL G+ + L C T P+ PML T+ ++E++++ + F CEYKYDG+RAQ
Sbjct: 376 ALLNHGISSADILLEKCGLTLHTPLRPMLGSITRDLAEVLSRLEGRAFACEYKYDGQRAQ 435
Query: 468 IHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
+H DG V IYSR+ E TG++PD+V + ++K+ V F+L+ E+VA D+ ++PF
Sbjct: 436 VHCSSDGHVSIYSRHLENITGQYPDLVALIPQIKEDEVEGFILEGEVVAVDKVTGALMPF 495
Query: 528 QTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
QTL+ R RK+V LS +KVDVC++AFD++Y NG+ LL+E R RRE L F+E PG F +
Sbjct: 496 QTLAGRGRKDVDLSKVKVDVCLFAFDLMYLNGKALLEEPFRRRRELLRTKFKEVPGKFTW 555
Query: 588 ATT--LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRD----------------------- 622
+ TS D + IQ+F AV+ CEG+++K +D +
Sbjct: 556 VKSQDATSEDAEAIQEFFKKAVEDKCEGIMVKLLDPEPGADLTNAALGNDEDPALPDPDS 615
Query: 623 ------------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFH 658
+TY+P KR +WLK+KKDY S D+LDLVPIAA+H
Sbjct: 616 TPSPSKKGSKPSLAEKKPRRKPLLSTYQPDKRLESWLKVKKDYTASHSDTLDLVPIAAWH 675
Query: 659 GRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML--------EERSSSLRSKVIP 710
G+G++ + LLA + +++CK +GF++A + + R P
Sbjct: 676 GQGRKARWWSPILLAVRNDETGALEAVCKCMSGFTDAFYRAMREFYDDGEVTGERKNTHP 735
Query: 711 KPRPYYRFADTISPDVWFEPTE 732
+ RP + PDVWFEP E
Sbjct: 736 R-RPGWIEYSGPEPDVWFEPCE 756
>gi|302508101|ref|XP_003016011.1| hypothetical protein ARB_05408 [Arthroderma benhamiae CBS 112371]
gi|291179580|gb|EFE35366.1| hypothetical protein ARB_05408 [Arthroderma benhamiae CBS 112371]
Length = 844
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 220/638 (34%), Positives = 332/638 (52%), Gaps = 92/638 (14%)
Query: 176 EFDP-----KMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE 229
EFDP K+ A W+ +G + + L+ F +++ RI I DI+ N+LR ++ P+
Sbjct: 145 EFDPHEQKEKLQAHWDAEGGKASYAILARAFSLVNGTQSRIKIVDILVNLLRLIIVGDPQ 204
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA 289
L+P V+LA N AP + +ELG+G ++I KAL A G +K Y + GD G VA
Sbjct: 205 SLLPAVWLATNAFAPPYVPIELGLGGSAISKALKRAYGLDNQGLKALYNKHGDAGDVAFE 264
Query: 290 SRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLI 347
++ QS +R+P PLTI V+D IA G SQE K+ ++ LL E +Y++
Sbjct: 265 AKKKQSFTLRRPKPLTIRSVYDALMKIANSKGTGSQETKQRIVEKLLQDTRGAEESRYIV 324
Query: 348 RLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP--------------------NIQSP 387
R L LRIG + T+L AL +A +Y SKPP NI S
Sbjct: 325 RTLVQHLRIGAVKTTILIALARAFLY----SKPPAATFPLRSRAELMSLSKEELSNIYSQ 380
Query: 388 LEEAAKIVKQVFSVLPVYEKIVPALLTDGV-WNLSNTCSFTPGIPIGPMLAKPTKGVSEI 446
EE +K ++ P Y IVP LL +GV L C T +P+ PML T+ + ++
Sbjct: 381 AEET---IKACYARHPNYNMIVPCLLENGVSAELLTKCGITLHVPLLPMLGSITRDLPQM 437
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
+ + FTCEYKYDG+RAQ+H G V I+SR+ E T K+PD+V V +++ +V
Sbjct: 438 LTRLHGRSFTCEYKYDGQRAQVHCDAAGKVSIFSRHLELMTDKYPDLVSLVPQIRSGAVS 497
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
SF+++ E+VA + E ++LPFQTL+ RA+KNV + IKV+VC+++FD++Y NGQPLL
Sbjct: 498 SFIMEGEVVAVNNETGELLPFQTLTNRAKKNVEIGSIKVNVCLFSFDLMYLNGQPLLDRT 557
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSI--DLDEIQKFLDAAVDASCEGLIIKTMDRD-- 622
R RRE L F E P F + ++ + D D + F + A+ CEG+++K +D
Sbjct: 558 FRERRELLRSLFVEIPNQFTWVKSIDAFPSDSDAVLNFFNDALQVKCEGIMVKVLDDKPV 617
Query: 623 ---------------------------------------------ATYEPSKRSLNWLKL 637
+TYEP KR +WLK+
Sbjct: 618 DRLLQAEDTATALGDGELLPPEEDKKQESTDTAEKQRGNRKRPLLSTYEPDKRLESWLKV 677
Query: 638 KKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
KKDY S ++LDL+PIAA+HG+G++ + LLA + +++ K +GF++
Sbjct: 678 KKDYSAS-SETLDLIPIAAWHGQGRKAKWWSPILLAVRNPETGSLEAVTKCMSGFTDKFY 736
Query: 698 E---ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
E E+ + +I +P Y + P+VWF+P E
Sbjct: 737 EANKEKYAEGSDNIISRP-SYVEYCG--EPEVWFQPQE 771
>gi|302660738|ref|XP_003022045.1| hypothetical protein TRV_03862 [Trichophyton verrucosum HKI 0517]
gi|291185971|gb|EFE41427.1| hypothetical protein TRV_03862 [Trichophyton verrucosum HKI 0517]
Length = 844
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 216/635 (34%), Positives = 332/635 (52%), Gaps = 86/635 (13%)
Query: 176 EFDP-----KMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE 229
EFDP K+ A W+ +G + + L+ F +++ RI I DI+ N+LR ++ P+
Sbjct: 145 EFDPHEQKEKLQAHWDAEGGKASYAILARAFSLVNGTQSRIKIVDILVNLLRLIIVGDPQ 204
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA 289
L+P V+LA N AP + +ELG+G ++I KAL A G +K Y + GD G VA
Sbjct: 205 SLLPAVWLATNAFAPPYVPIELGLGGSAISKALKRAYGLDNHGLKSLYNKHGDAGDVAFE 264
Query: 290 SRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLI 347
++ QS +R+P PLTI V+D IA G SQE K+ ++ LL E +Y++
Sbjct: 265 AKKKQSFTLRRPKPLTIRSVYDALMKIANSKGTGSQETKQRIVEKLLQDTRGAEESRYIV 324
Query: 348 RLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP-----------------NIQSPLEE 390
R L LRIG + T+L AL +A +Y SKPP + S +
Sbjct: 325 RTLVQHLRIGAVKTTILIALARAFLY----SKPPAATFPIRSRAELMRLSKEELSSIYSQ 380
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGV-WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
A + +K ++ P Y IVP LL +GV L C T +P+ PML T+ + +++ +
Sbjct: 381 AEETIKACYARHPNYNMIVPCLLENGVSAELLTKCGITLHVPLLPMLGSITRDLPQMLTR 440
Query: 450 FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
FTCE+KYDG+RAQ+H G V I+SR+ E T K+PD+V V +++ +V SF+
Sbjct: 441 LHGRSFTCEFKYDGQRAQVHCDAAGKVSIFSRHLELMTDKYPDLVSLVPQIRSGAVSSFI 500
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
++ E+VA + E ++LPFQTL+ RA+KNV + IKV+VC+++FD++Y NGQPLL R
Sbjct: 501 MEGEVVAVNNETGELLPFQTLTNRAKKNVEIGSIKVNVCLFSFDLMYLNGQPLLDRTFRE 560
Query: 570 RREHLYDSFEEEPGFFQFATTLTSI--DLDEIQKFLDAAVDASCEGLIIKTMDRD----- 622
RRE L F E P F + ++ + D D + F + A+ CEG+++K +D
Sbjct: 561 RRELLRSLFVEVPNQFTWVKSIDAFPSDSDTVLNFFNDALQVKCEGIMVKVLDDKPVDCL 620
Query: 623 ------------------------------------------ATYEPSKRSLNWLKLKKD 640
+TYEP KR +WLK+KKD
Sbjct: 621 LQVEDTATALPDGELLPPEEDQKQESTDTAEKQRGNRKRPLLSTYEPDKRLESWLKVKKD 680
Query: 641 YIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE-- 698
Y S ++LDL+PIAA+HG+G++ + LLA + +++ K +GF++ E
Sbjct: 681 YSAS-SETLDLIPIAAWHGQGRKAKWWSPILLAVRNPETGSLEAVTKCMSGFTDKFYEAN 739
Query: 699 -ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
E+ + +I +P Y + P+VWF+P E
Sbjct: 740 KEKYAEGSDNIISRP-SYVEYCG--EPEVWFQPQE 771
>gi|169622727|ref|XP_001804772.1| hypothetical protein SNOG_14590 [Phaeosphaeria nodorum SN15]
gi|111057010|gb|EAT78130.1| hypothetical protein SNOG_14590 [Phaeosphaeria nodorum SN15]
Length = 869
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 244/739 (33%), Positives = 364/739 (49%), Gaps = 101/739 (13%)
Query: 93 DTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDNPI--DSEKESQPTPPSPKKRKVN 150
D Q + T V ++ E AE P + + DS K + P P K+K
Sbjct: 67 DQQQAQATEPVSSNELYEDAERPCVRVTAEEGADTTTAVQRDSLKAEELVEPMPPKQKNT 126
Query: 151 VNSVSAKEKIAELKSNIVLLKKKAGEFDP-----KMVACWE-KGERVPFIFLSLVFDMIS 204
+ S + + +NI + EFDP + W G + L+ F +I+
Sbjct: 127 LTLQSTATEEDTITANIPF-DQSPLEFDPIKYIPDLQKHWAVDGGLATYALLTRCFILIN 185
Query: 205 NETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAE 264
+ T RI I D + N+LRT++E P L+P V+LA N I+P + LELG+G ++I KAL +
Sbjct: 186 STTSRIKIVDTLVNLLRTIIEGDPGSLLPAVWLATNAISPPYIDLELGLGGSAISKALKK 245
Query: 265 ACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDS 323
CG + +K + GD G VA ++ QS +RKP PLTI VFD+ IA G S
Sbjct: 246 VCGLDNAGLKVLNNKYGDAGDVAFEAKKKQSFTLRKPKPLTIKAVFDSLVKIANSKGNGS 305
Query: 324 QEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP 382
E K+ ++ L+ A E +Y++R L LRIG + T+L AL +A + +E PP
Sbjct: 306 VENKQRIVERLVQDARGAEESRYIVRTLVQHLRIGAVKTTMLIALSRAFMLSE-----PP 360
Query: 383 NI------QSPLEEAAK------------IVKQVFSVLPVYEKIVPALLTDGVWN-LSNT 423
+ Q L E K IVK F+ P Y ++PALL GV + L
Sbjct: 361 SADFETRGQKELAELKKEELAEIYSRNEEIVKACFARRPNYNDLIPALLEIGVCDELLLR 420
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
C IP+ PML T+ + E+ K Q +F CEYKYDG+RAQ+H E G V I+SR+
Sbjct: 421 CGLALHIPLRPMLGSITRDMGEMFTKLQGRDFACEYKYDGQRAQVHCDEKGKVTIFSRHL 480
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T K+PD+V V +++ V SF+L+ E+VA DR ++ FQTL+ RARK+V++ +
Sbjct: 481 EVMTDKYPDLVALVPQIRGEGVSSFILEGEVVAIDRNSGELKTFQTLANRARKDVAIGAV 540
Query: 544 KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQK 601
+DVC++AFD++Y NG+ LL R RR L F E P F + L TS D+D +Q
Sbjct: 541 TIDVCLFAFDLMYLNGEELLNRPFRERRSLLKSLFVEIPHTFTWVKCLDATSADVDAVQA 600
Query: 602 FLDAAVDASCEGLIIKTM------------------------------------------ 619
F +A+D CEG+++K +
Sbjct: 601 FFQSALDIKCEGIMVKVLDNLPNPDLLDNTNDLNDKTPSLPPTPKKKKSTKSKSKAKSTD 660
Query: 620 --DRD------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
D+D +TYEP KR +WLK+KKDY + ++LDL+P+ AFHG G++
Sbjct: 661 DGDKDEAKSHGRRKALLSTYEPDKRLDSWLKVKKDY-STTSETLDLIPVGAFHGSGRKAA 719
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSS-------SLRSKVIPKPRPYYRF 718
+ LLA ++ + +++ K +GF++A + + + + KPR
Sbjct: 720 WWSPILLAIRNAETGQLEAVTKCMSGFTDAFYKANRAKYDKDDPDCTTVLASKPRYVEYN 779
Query: 719 ADTISPDVWFEPTERPETS 737
+PDVWFEP E E +
Sbjct: 780 GGAGTPDVWFEPQEVWEVA 798
>gi|212527654|ref|XP_002143984.1| DNA ligase I, putative [Talaromyces marneffei ATCC 18224]
gi|210073382|gb|EEA27469.1| DNA ligase I, putative [Talaromyces marneffei ATCC 18224]
Length = 852
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 219/628 (34%), Positives = 330/628 (52%), Gaps = 79/628 (12%)
Query: 175 GEFDPKMVACW-EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP 233
++ P++ W + G + FL+ F ++++ T RI I D + N+LR ++E P+ L+P
Sbjct: 145 AKYFPELQKHWSQDGGDASYAFLTQAFILVNSTTKRIKIVDTLVNLLRILIEGAPDSLLP 204
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS 293
V+LA N AP +E ELG+G + I KA G +K Y + GD G VA ++
Sbjct: 205 AVWLATNSFAPPYEPAELGLGGSVISKAFKNIYGLNAQGLKTLYNKHGDAGDVAFEAKKR 264
Query: 294 QSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQ 351
QS ++KP PLTI V+ + IA+ G SQE K+ ++ LL + E +Y++R L
Sbjct: 265 QSFTLKKPKPLTIKGVYQSLVKIARSKGAGSQETKQRIVERLLQDSRSAEESRYIVRTLV 324
Query: 352 SKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLE------------------EAAK 393
LRIG + T+L AL +A ++++ PP+ P + A +
Sbjct: 325 QHLRIGAVKATMLIALARAFLFSK-----PPDATFPTKGMDSLAKLKKEELTEVYLRAEE 379
Query: 394 IVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
VK ++ P Y+ +VP LL GV L C T +P+ PML T+ +S+++ K Q
Sbjct: 380 TVKASYARHPNYDDLVPCLLEIGVTEELLMRCGLTLHVPLRPMLGSITRDLSDMLTKLQG 439
Query: 453 MEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDC 512
+F CEYKYDG+RAQ+H +G V I+SR+ E T K+PD+V V ++ SV SF+L+
Sbjct: 440 RDFACEYKYDGQRAQVHCDSNGKVSIFSRHLELMTDKYPDLVSLVPDIRGESVSSFILEG 499
Query: 513 EIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRRE 572
E+VA D+E + FQ L+ RA+KNV + IKV VC++AFD++Y NG+PLL R RR+
Sbjct: 500 EVVAVDQESGDLQAFQILTNRAKKNVEIGSIKVKVCLFAFDLMYLNGEPLLDRSFRERRD 559
Query: 573 HLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD-------- 622
L F E P F + L TS D + + +F +A D CEG+++K +D D
Sbjct: 560 MLRSLFTEIPKRFTWVKNLDATSADSEAVLEFFKSATDVKCEGIMVKVLDNDMKSGNRVM 619
Query: 623 -----------------------------------ATYEPSKRSLNWLKLKKDYIESIGD 647
+TYEP KR +WLK+KKDY S D
Sbjct: 620 NASDDLEVNDEAQDKQFSLASAKKKDKTTRHKTLLSTYEPDKRLESWLKVKKDYSTS-SD 678
Query: 648 SLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSL 704
+LDL+PIAA+HG G++ + LLA + +++ K +GF++ + E+ S
Sbjct: 679 TLDLIPIAAWHGSGRKAKWWSPILLAIRNPETGLLEAVTKCMSGFTDKFYQTNKEKYSED 738
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTE 732
VI +P Y +A PDVWFEP E
Sbjct: 739 SENVISRP-SYIDYAG--HPDVWFEPQE 763
>gi|409080357|gb|EKM80717.1| hypothetical protein AGABI1DRAFT_71206 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 819
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 242/713 (33%), Positives = 380/713 (53%), Gaps = 81/713 (11%)
Query: 83 SSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQID-NPIDSEKESQPTP 141
++SP K R +TP TN GEKI PS + P+ +D ++++ E + P
Sbjct: 32 TTSPGKIRATPLETPVETNH--GEKI------PS---LSPLVIDVDAEDVETQFEERLVP 80
Query: 142 PSP-------KKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFI 194
P +K++VN+ S K + + L + P EKG P+
Sbjct: 81 PLAVPQTVRVQKKEVNIPGHSVKFQPLQFAP----LDVDPINYSPDGQPWLEKG--APYA 134
Query: 195 FLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIG 254
FL+ F +S+ RI+I + + N LRT++ PE L+P +YL +N +AP + +ELG+G
Sbjct: 135 FLTHAFSTLSSTRSRIIIINTLTNCLRTIISKHPESLLPSLYLLSNTLAPPYAPIELGLG 194
Query: 255 DASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRL 314
A I +A+ G T + +KK Y +GD G VA A++++ + LTI+ V+D+ +
Sbjct: 195 PAIISRAIQNVSGITPATLKKLYNTLGDPGDVAVAAKTNLRTLVPHPQLTISYVYDSLMM 254
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
IA G+ + +K+ I+ LL++A E +Y+ R L LR+G ++L AL +A +
Sbjct: 255 IAHSKGQGAARQKEKLIEKLLLSANGEETRYMTRTLCQNLRVGAVRTSMLTALARAIALS 314
Query: 375 EQ-----------HSK------PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGV 417
+ H+K P + +A IVK VF P Y IV ALL G+
Sbjct: 315 YESPGLLEGEDTLHNKAGLSDCPRNELNEIFLKAESIVKGVFVKHPNYGNIVTALLDTGL 374
Query: 418 WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL-EDGSV 476
+ L T GIP+ P L P + + E+ ++ + F E+KYDG+RAQ+H + +DG +
Sbjct: 375 YGLEEKVPLTIGIPLHPTLGSPMRSLDEVYDRLANQPFVAEFKYDGQRAQVHAITKDGRL 434
Query: 477 ---EIYSRNAERNTGKFPDVVLAVSRL--KKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
+I+SR+ E T K+PD+ L V+ L + PS+ SFV+D EIVA + I FQ LS
Sbjct: 435 SEFKIFSRHLEDMTSKYPDIQLLVNSLLERSPSISSFVMDAEIVAVNPRTGAIKTFQELS 494
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFE----EEPGFFQF 587
RA+K+V + DI+V VC+YAFD++Y NG+ LLQ+ R RR L +SF EE GF +F
Sbjct: 495 NRAKKDVQVRDIQVSVCLYAFDLMYLNGESLLQKTFRERRSLLQNSFSPYTPEEIGFARF 554
Query: 588 ATTLTSIDLD----EIQKFLDAAVDASCEGLIIKTMDR-------------------DAT 624
T + S++ + ++ F ++++ CEGL+IK +D AT
Sbjct: 555 -THVESMNSEVGQASVEVFWRRSIESQCEGLMIKLLDNIVVDPEGDKSNSHMRKKPLPAT 613
Query: 625 YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQS 684
YEP KR+ WLKLKKDY+ +GDSLDLVP+ A++G G++ + L+A YD ++ +F +
Sbjct: 614 YEPDKRTAAWLKLKKDYVSGVGDSLDLVPVGAWYGNGRKVKWWSPILMAVYDQSSGQFVA 673
Query: 685 ICKIGTGFSEAMLEERSSSLR----SKVIPKPRPYYRFA-DTISPDVWFEPTE 732
+CK +GF+++ ++ VI PRP + +PDV+F P E
Sbjct: 674 VCKCMSGFTDSFYQDTRDRYNPGDGPDVICSPRPLWECDFGGFTPDVYFRPQE 726
>gi|402470842|gb|EJW04879.1| DNA ligase I, ATP-dependent (dnl1) [Edhazardia aedis USNM 41457]
Length = 598
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/544 (36%), Positives = 320/544 (58%), Gaps = 26/544 (4%)
Query: 192 PFIFLSL--VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
P +F S + + IS R+ I + + ++++ E LV YL I P G
Sbjct: 5 PILFSSFCNLLEKISKTKKRLEIQSYLAEYFK-LLKSNEEGLVAACYLCTATIHPDFMGK 63
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELGIG+ +I+K +AE + ++ ++++ GDLG + +++ +S+ TI V
Sbjct: 64 ELGIGETTIVKIVAEVTNKKLKMIRDEFRKEGDLGTIVFKNKA-KSLFTAVANFTIIDVL 122
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IA + G S + K N++ ++ +++ E +YLIRL + +++ GLA +T+L LG
Sbjct: 123 KNLREIADDIGAQSLKGKTNKMLKMISKSSNLEAKYLIRLYEGRMKTGLAFKTVLICLG- 181
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
V+ + ++ VK ++ P++EKI+ AL+ N+ PG
Sbjct: 182 -LVFGNE------------KDLVDDVKYAYNQCPIFEKIIIALIKFKS-NILEHVKIEPG 227
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PMLA+P+K ++ N+ +F CE+KYDGERAQIH D I+SRN+E T K
Sbjct: 228 IPVKPMLAQPSKNLTAAFNRVNGEDFVCEFKYDGERAQIHKF-DNKYMIFSRNSEDLTPK 286
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
+PD+ ++++ + +FVLDCEIVAYD + +ILPFQ L+TR RK+V L IKV VCI
Sbjct: 287 YPDLQNTITKICRDD-GNFVLDCEIVAYDVTEDRILPFQILTTRKRKDVKLEHIKVKVCI 345
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
YAFD L+ + LL E L+ R++ + ++F E G F+ ++ +EI+ + ++
Sbjct: 346 YAFDCLFFGEKSLLDEPLKSRKQVIANNFTEINGQFKLIDSVVCASSEEIETIFNDSISK 405
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
+CEGL+IK+++ + Y+PS RS +W+KLKKDY++ + DSLDLV I A++G+GKRTG YG
Sbjct: 406 NCEGLMIKSLN--SLYKPSMRSTSWVKLKKDYLDGMADSLDLVVIGAYYGKGKRTGAYGG 463
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY---YRFADTISPDV 726
+LLACY+ +++++ICKIGTGF++ L + + + V+ ++ ++ I PDV
Sbjct: 464 YLLACYNEEEDKYEAICKIGTGFNDETLAKIFNDFKEYVVDNSEKMPQDFQISENIKPDV 523
Query: 727 WFEP 730
W P
Sbjct: 524 WLLP 527
>gi|70947733|ref|XP_743454.1| DNA ligase 1 [Plasmodium chabaudi chabaudi]
gi|56522958|emb|CAH76291.1| DNA ligase 1, putative [Plasmodium chabaudi chabaudi]
Length = 433
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 167/343 (48%), Positives = 239/343 (69%), Gaps = 1/343 (0%)
Query: 388 LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEI 446
E K VK LP E I+ LL N L C+ G+P+ PMLAKPTKG+ E+
Sbjct: 11 FECMEKSVKSALCELPNIEMIIQNLLNGDDMNVLMKKCTVKTGVPVQPMLAKPTKGIQEV 70
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
+++F ++ FTCEYKYDGERAQIHY++ +++I+SRN E T K+PDV+ V P V
Sbjct: 71 LDRFNNVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQIVKDQIMPGVT 130
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
++D E+VAYD E +KILPFQ L+TR RK+V + +IKV +C++ FD++ NG P+++E
Sbjct: 131 ESIIDSEVVAYDIENKKILPFQILTTRKRKDVDIENIKVKICLFPFDLICCNGVPVIKEP 190
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYE 626
L +RR+ LY + + G ++AT ++++I FL A++ SCEGL++KT+ +A+YE
Sbjct: 191 LEIRRKLLYSLLKCKEGVLEYATHSEMNNIEDIDMFLQDAIENSCEGLMVKTLLDNASYE 250
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
PS+RSLNWLK+KKDYIE + DS+DLVPIA ++G+GKR+GVYGAF+LA Y+S E FQ++C
Sbjct: 251 PSRRSLNWLKVKKDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLAAYNSETENFQTVC 310
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
K GTGFS+ +L SL K+IP + YY +D ++PDVWF+
Sbjct: 311 KAGTGFSDEILNALHESLSDKIIPNKKSYYEVSDKLNPDVWFD 353
>gi|401396632|ref|XP_003879870.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP])(Lig(Tk)),
related [Neospora caninum Liverpool]
gi|325114278|emb|CBZ49835.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP])(Lig(Tk)),
related [Neospora caninum Liverpool]
Length = 1091
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 223/637 (35%), Positives = 326/637 (51%), Gaps = 113/637 (17%)
Query: 192 PFIFLSLV--FDMI-----SNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
P +F LV FD I S T I+ N+ R ++ P+ L +Y+ NK+AP
Sbjct: 374 PILFEVLVNAFDKIEQMKASGTGSNKKQTVILTNLFRLLLFYEPKTLYKAIYVCLNKVAP 433
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G E+G+G++ I+KA+AE GRTE+H+KK+ Q DLG VA+ S + P LT
Sbjct: 434 DYLGQEVGVGESLILKAMAETYGRTEAHLKKELQHTEDLGRVAERSSCKTRTLFPPPRLT 493
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I VFD + I++ AGKDSQ K++ +K LLV EP+Y+IR LQ ++R G + T+
Sbjct: 494 IDGVFDQLKAISQCAGKDSQLHKRDLLKRLLVGGKGAEPKYIIRFLQQRMRTGASTATVY 553
Query: 365 AAL------------GQAAVYNEQHSKPPPN----------------------------- 383
AL G AV + + P
Sbjct: 554 QALAFACFLTHNARDGSPAVGDTRRHVPQTESNQESPSLSSSSSPSSPSSSSSSSSSLPS 613
Query: 384 ------IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT-CSFTPGIPIGPML 436
++S L + V++ +P E +V LL + C TPGIP+ PML
Sbjct: 614 AMSAVELESHLSRMEQSVRRALCEVPNVEIVVAHLLRGADADALAALCVATPGIPLQPML 673
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL------------------------- 471
A+PT+G E+V + + EFTCE+KYDGER Q+H +
Sbjct: 674 ARPTRGFEEVVERLKHTEFTCEFKYDGERIQLHLVAEQAAKKTPGLCPSTASPASPVSAS 733
Query: 472 -EDGS---------------VEIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSFVLDCEI 514
E+G+ V ++SRN E T K+PD++ + +S L+ + +LD E+
Sbjct: 734 REEGTGTGPAGSVRKISPSRVRLFSRNLEEITQKYPDIIDMFLSSLQD-TTDECILDGEV 792
Query: 515 VAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHL 574
VAYD E ILPFQTL+ R RK V I+V V ++ FD + NG+ LL + L RRE +
Sbjct: 793 VAYDVENGTILPFQTLTRRKRKGVDKDGIEVRVALFLFDCMRLNGECLLGKTLEARREKM 852
Query: 575 YDS--FEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSL 632
+ F+ P Q AT E ++FL A++ +ATYEPSKRSL
Sbjct: 853 KQAIDFQRNP-LVQHATYKDISQAQEFEEFLSEAIE------------ENATYEPSKRSL 899
Query: 633 NWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGF 692
NWLK+KKDY++ + DS+DLVPI A +G+GKR+G +G +LLA Y+ +E +Q++CK TGF
Sbjct: 900 NWLKVKKDYVDGLTDSVDLVPIGACYGKGKRSGTFGTYLLAVYNPADETYQTVCKAATGF 959
Query: 693 SEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
SE L++ ++L +I +PYY + + DVWFE
Sbjct: 960 SEEALQQHHNALSEHIISHKKPYYDVSPKLEADVWFE 996
>gi|124512824|ref|XP_001349768.1| DNA ligase I [Plasmodium falciparum 3D7]
gi|23615185|emb|CAD52175.1| DNA ligase I [Plasmodium falciparum 3D7]
gi|23683342|gb|AAL59668.2| DNA ligase 1 [Plasmodium falciparum]
gi|24935322|gb|AAN64156.1| DNA ligase 1 precursor [Plasmodium falciparum]
Length = 912
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 166/343 (48%), Positives = 239/343 (69%), Gaps = 1/343 (0%)
Query: 388 LEEAAKIVKQVFSVLPVYEKIVPALLT-DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEI 446
E K VK LP E I+ LL D + LS C+ GIP+ PMLAKPTKGV E+
Sbjct: 489 FECMEKSVKSALCELPNIEIIIQNLLNGDDMNTLSKKCTVKTGIPVQPMLAKPTKGVQEV 548
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
+++F ++ FTCEYKYDGERAQIHY++ +++I+SRN E T K+PDV+ + +V+
Sbjct: 549 LDRFNNVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQIIKDQIGENVK 608
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
++D E+VAYD KILPFQ L+TR RK+V + +IKV VC++ FD++ NG P+++E
Sbjct: 609 ECIIDSEVVAYDIVNNKILPFQVLTTRKRKDVDIENIKVKVCLFPFDLICCNGIPVIKEP 668
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYE 626
L VRR+ LY + + G +AT ++++I FL A++ +CEGL++KT+ +A+YE
Sbjct: 669 LAVRRKLLYSLLKSKDGVLSYATHSEMNNIEDIDMFLQDAIENNCEGLMVKTLVENASYE 728
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
PS+RSLNWLK+KKDY+E + DS+DLVPIA ++G+GKR+GVYGAF+LA Y+S E FQ++C
Sbjct: 729 PSRRSLNWLKVKKDYVEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLAAYNSETENFQTVC 788
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
K GTGFS+ +L +L K+IP + YY +D ++PDVWF+
Sbjct: 789 KAGTGFSDEILSTLYETLSEKIIPNKKSYYEVSDKLNPDVWFD 831
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 108/185 (58%), Gaps = 5/185 (2%)
Query: 193 FIFLSLVFDMISNETG-----RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE 247
F FL+ F+ I G + ++ I+ N+ R ++ +P DL+P VY+ NK+AP +
Sbjct: 177 FTFLTNAFNQIEELKGSGTGSKKNVSIILSNIFRVLIYYSPNDLIPAVYITLNKVAPDYL 236
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITK 307
+E G+G+A I+K ++EA RTES +KK Q++ DLG++A+ + LTI
Sbjct: 237 NVEAGVGEALILKTMSEAYSRTESSIKKDLQQIEDLGIIAENCSCKMRTIFPLPRLTIQS 296
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
VF + I G +SQ+KK+ IK LLV+A E +Y++R LQ +LRIG+ T++ AL
Sbjct: 297 VFHELKSIPNLIGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVVQAL 356
Query: 368 GQAAV 372
A +
Sbjct: 357 SYAFI 361
>gi|397626161|gb|EJK68053.1| hypothetical protein THAOC_10812, partial [Thalassiosira oceanica]
Length = 704
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 174/350 (49%), Positives = 240/350 (68%), Gaps = 4/350 (1%)
Query: 384 IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
+ S +E A I+K+ + +P ++ ++ ALLT + + N+ + PGIP+ PMLAKPTK +
Sbjct: 221 LSSRIETAEAIIKKAYCQVPSFDALLDALLTVPLTEIHNSITLLPGIPVVPMLAKPTKSI 280
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSR-LKK 502
+++ + + FTCEYKYDGERAQ+H G +++SRN T KFP+V L V
Sbjct: 281 LDVLKRLNGLRFTCEYKYDGERAQVHCTPGGETKVFSRNLLDTTEKFPEVPLYVRESCGS 340
Query: 503 PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPL 562
V+SFVLD E+VA++RE + +PFQ LSTR + S KV V + AFD++Y NG+ L
Sbjct: 341 TDVKSFVLDTEVVAFNRETGQFVPFQVLSTRKKTEESAESAKVQVIVQAFDLMYLNGESL 400
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE---IQKFLDAAVDASCEGLIIKTM 619
L + L RRE L+ +F G FQ+AT L + E I++FLDAAV CEGL++KT+
Sbjct: 401 LDKPLSHRRELLHKNFLPVEGKFQYATALDHTEDGETAVIEEFLDAAVKGQCEGLMVKTL 460
Query: 620 DRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNN 679
D +A YEP +RSLNWLKLKKDY+E +GDS+DLVP+ A+HGRGKRTGVYGA+LLACYD +
Sbjct: 461 DVNAVYEPDRRSLNWLKLKKDYLEGLGDSVDLVPLGAYHGRGKRTGVYGAYLLACYDYDT 520
Query: 680 EEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
EEFQS+CKIGTGFSE L+ ++ L+ VIP+ Y +DT++ DVWF+
Sbjct: 521 EEFQSVCKIGTGFSEEDLKSLAADLKGHVIPEKSSQYVVSDTLACDVWFD 570
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 3/134 (2%)
Query: 242 IAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMR--- 298
+AP HE +ELG+GD+ ++KA+ EA G +K +Y+E GDLG VA + + Q +
Sbjct: 2 VAPKHENVELGVGDSILVKAIGEASGTKNGTIKSKYEEEGDLGDVAMSCKGRQKTLMFGA 61
Query: 299 KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGL 358
P L V F+ IA +G SQ+ K + IK LLV A EP+++IR LQ KLRIGL
Sbjct: 62 GPRRLGCGDVLGMFKEIANTSGSQSQKWKVDTIKKLLVRAKGNEPKFIIRGLQGKLRIGL 121
Query: 359 AEQTLLAALGQAAV 372
A+ T+LAA+ QA V
Sbjct: 122 AQSTVLAAIAQAVV 135
>gi|242784288|ref|XP_002480357.1| DNA ligase I, putative [Talaromyces stipitatus ATCC 10500]
gi|218720504|gb|EED19923.1| DNA ligase I, putative [Talaromyces stipitatus ATCC 10500]
Length = 861
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 222/632 (35%), Positives = 333/632 (52%), Gaps = 82/632 (12%)
Query: 175 GEFDPKMVACWEK-GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP 233
++ P++ W++ G + L+ F ++++ T RI I D + N+LR ++E P+ L+P
Sbjct: 145 AKYLPELQKHWKQDGGDASYALLTHAFILVNSTTKRIKIVDTLVNLLRILIEGAPDSLLP 204
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS 293
V+LA N AP +E ELG+G + I KA G +K Y + GD G VA ++
Sbjct: 205 AVWLATNSFAPPYEPAELGLGGSVISKAFKNIYGLNAQGLKTLYNKHGDAGDVAFEAKKR 264
Query: 294 QSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQ 351
QS ++KP PLTI V+ + IAK G SQE K+ ++ LL E +Y++R L
Sbjct: 265 QSFTLKKPKPLTIKGVYQSLTKIAKSKGTGSQETKQRIVERLLQDTRSAEESRYIVRTLV 324
Query: 352 SKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP--LEEAAKI--------------- 394
LRIG + T+L AL +A ++ SKPP S +E AK+
Sbjct: 325 QHLRIGAVKTTMLIALARAFLF----SKPPDAKFSTKGMEYLAKLKKEELTEVYLRAEET 380
Query: 395 VKQVFSVLPVYEKIVPALLTDGVW-NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDM 453
VK ++ P Y+ +VP LL GV L C T IP+ PML T+ +S+++ K Q
Sbjct: 381 VKASYARHPNYDDLVPCLLEIGVTKELLVRCGLTLHIPLRPMLGSITRDLSDMLTKLQGR 440
Query: 454 EFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCE 513
+F CEYKYDG+RAQ+H +G V I+SR+ E T K+PD+V V +++ SV SF+L+ E
Sbjct: 441 DFACEYKYDGQRAQVHCDSNGKVSIFSRHLELMTDKYPDLVSLVPQIRGESVSSFILEGE 500
Query: 514 IVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREH 573
+VA D++ + FQ L+ RA+KNV + IKV+VC++AFD++Y NG+PLL R RR+
Sbjct: 501 VVAVDQDTGDLQAFQILTNRAKKNVEIGSIKVNVCLFAFDLMYLNGEPLLDRSFRERRDM 560
Query: 574 LYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD--------- 622
L F E P F + L TS D + + +F +A+D CEG+++K +D +
Sbjct: 561 LRSLFTEIPYRFTWVKNLDATSADSETVLEFFKSAIDVKCEGIMVKVLDNEIKPGNGITD 620
Query: 623 ---------------------------------------ATYEPSKRSLNWLKLKKDYIE 643
+TYEP KR +WLK+KKDY
Sbjct: 621 SVNGNFDEEPAANEEVQDKQLSLAATKKKERNTRRKVLLSTYEPDKRLESWLKVKKDYST 680
Query: 644 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ER 700
S D+LDL+PIAA+HG G++ + LLA + +++ K +GF++ + E+
Sbjct: 681 S-SDTLDLIPIAAWHGNGRKAKWWSPILLAVRNPETGLLEAVTKCMSGFTDKFYQSNKEK 739
Query: 701 SSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
S VI +P Y +A PDVWFEP E
Sbjct: 740 YSENGENVISRP-SYIDYAG--HPDVWFEPQE 768
>gi|115396374|ref|XP_001213826.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193395|gb|EAU35095.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 760
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 220/626 (35%), Positives = 331/626 (52%), Gaps = 75/626 (11%)
Query: 174 AGEFDPKMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV 232
A ++ ++ A W +G + L+ F + + T RI I D + N LR ++E P ++
Sbjct: 60 ATKYAEELQAHWAAEGGSASYALLTRAFVLANATTSRIKIVDTLVNFLRILIEGDPSSVL 119
Query: 233 PVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRS 292
P V+LA N I+P ++ LELG+G +SI KAL + G +K Y + GD G VA ++
Sbjct: 120 PAVWLATNSISPPYDELELGLGGSSISKALKKIYGLDNQGLKTLYDKHGDAGDVAFEAKK 179
Query: 293 SQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLL 350
QS + KP PL I V+ + + IA G SQE K+ ++ LL E +Y++R L
Sbjct: 180 RQSFTLIKPKPLKIKGVYQSLQKIAASKGSGSQETKQRIVEKLLQDTRGAEESRYIVRTL 239
Query: 351 QSKLRIGLAEQTLLAALGQAAVYNEQHSKPP-----------------PNIQSPLEEAAK 393
LRIG + T+L AL +A +Y SKPP N+ A +
Sbjct: 240 VQNLRIGAVKTTMLIALARAFLY----SKPPGAEFSVYSQQELASLKKENLSEIYNNAEE 295
Query: 394 IVKQVFSVLPVYEKIVPALLTDGV-WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
IVK ++ P Y +VP LL GV L C IP+ PML T+ +S+++ K Q
Sbjct: 296 IVKASYARHPNYNDLVPCLLEIGVNEELLLRCGLQLHIPLRPMLGSITRDLSDMLTKLQG 355
Query: 453 MEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDC 512
+F+CEYKYDG+RAQ+H + G V I+SR+ E T K+PD+V V +++ SV SF+L+
Sbjct: 356 RDFSCEYKYDGQRAQVHCDDKGRVSIFSRHLENMTEKYPDLVSLVPQIRGESVSSFILEG 415
Query: 513 EIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRRE 572
E+VA D+E ++ FQ LS RA+K+V + IKV+VC++AFD++Y NG+PLL R RRE
Sbjct: 416 EVVAVDQETGELQTFQVLSNRAKKDVQIGAIKVNVCLFAFDLMYLNGEPLLNRPFRERRE 475
Query: 573 HLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDR--------- 621
L F E P F + +L TS D D + +F A D+ CEG+++K +D
Sbjct: 476 LLRSLFVEIPNRFTWVKSLDATSADSDAVLEFFKGATDSKCEGIMVKVLDNVPKNTAVPP 535
Query: 622 -----------------DA---------------TYEPSKRSLNWLKLKKDYIESIGDSL 649
DA TYEP KR +WLK+KKDY S D+L
Sbjct: 536 DEQNSMPAAPTSADPPADASKPAPKGNRRKALLSTYEPDKRLESWLKVKKDYSTS-SDTL 594
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRS 706
DL+P+A +HG+G++ + LLA + +++ K +GF++ + ++ + +
Sbjct: 595 DLIPVAGWHGQGRKAKWWSPILLAVRNPETGSLEAVTKCMSGFTDKFYQANKDKYAEGST 654
Query: 707 KVIPKPRPYYRFADTISPDVWFEPTE 732
VI +P + + PDVWFEP E
Sbjct: 655 NVISRPAYVEYYGE---PDVWFEPQE 677
>gi|225555868|gb|EEH04158.1| DNA ligase [Ajellomyces capsulatus G186AR]
Length = 844
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 220/625 (35%), Positives = 334/625 (53%), Gaps = 73/625 (11%)
Query: 177 FDP-----KMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPED 230
FDP ++ W G + L+ F +++N RI I D + N LR V E P+
Sbjct: 137 FDPSGYIEQLRTHWAFGGGHASYAILTRAFVLVNNTQSRIKIVDTLANFLRVVTEADPDS 196
Query: 231 LVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKAS 290
LVP V+L N IAP + LELG+G + I KAL A G +K Y + GD G VA +
Sbjct: 197 LVPAVWLTTNAIAPPYVPLELGLGGSIISKALKTAYGLNNQGLKILYDKHGDAGDVAFEA 256
Query: 291 RSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIR 348
+ Q+ +R+P PL+I V+++ I++ G SQE K+ ++ LL E +YL+R
Sbjct: 257 KKRQTFTLRRPRPLSIRGVYESLLKISQSKGPGSQEAKQRIVEKLLQDTRGAEESRYLVR 316
Query: 349 LLQSKLRIGLAEQTLLAALGQA-----------AVYNEQH-SK-PPPNIQSPLEEAAKIV 395
L LRIG + T+L AL +A +VY+ SK I S A +IV
Sbjct: 317 TLVQHLRIGAVKTTMLIALARAFLLSGPAASSFSVYSRTDLSKLKKEEIASIYNRAEEIV 376
Query: 396 KQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDME 454
+ ++ P Y ++P LL G+ + L C T IP+ PML T+ +++++ K Q +
Sbjct: 377 RACYARHPNYNDLIPCLLEVGISDELLVRCGLTLHIPLRPMLGSITRDLTQMLTKLQGRK 436
Query: 455 FTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEI 514
FTCEYKYDG+RAQ+H G+V I+SR+ ER T K+PD+V + R++ V SF+L+ EI
Sbjct: 437 FTCEYKYDGQRAQVHCDSSGTVSIFSRHLERMTDKYPDLVALIPRIRGEGVSSFILEGEI 496
Query: 515 VAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHL 574
VA ++ ++L FQTL+ RA+KNV + IK+ VC++AFD+++ NG+PLL+ LR RRE L
Sbjct: 497 VAVNQGTGELLAFQTLTNRAKKNVGIDSIKISVCLFAFDLMFLNGEPLLERPLRERRELL 556
Query: 575 YDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD---------- 622
F + P F F ++ TS D + + F A+DA CEGL++K +D
Sbjct: 557 RGLFIDIPHHFTFVKSIDATSFDSEAVLAFYKDALDAKCEGLMVKLLDDSVTPDMPEEES 616
Query: 623 --------------------------------ATYEPSKRSLNWLKLKKDYIESIGDSLD 650
+TYEP KR +WLK+KKDY + D+LD
Sbjct: 617 ATKPISTSELPSAPASMELNVNAKHKGRRSLLSTYEPDKRLESWLKVKKDY-SAASDTLD 675
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSK 707
L+PIAA+HG+G++ + LLA + +++ K +GF++ + E+ +
Sbjct: 676 LIPIAAWHGQGRKAKWWSPILLAARNPETGLLEAVTKCISGFTDKFYQANKEKYAEGSEN 735
Query: 708 VIPKPRPYYRFADTISPDVWFEPTE 732
+I +P Y + + P+VWFEP E
Sbjct: 736 IISRPN-YVEYRN--EPEVWFEPQE 757
>gi|325090439|gb|EGC43749.1| DNA ligase [Ajellomyces capsulatus H88]
Length = 844
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 217/603 (35%), Positives = 329/603 (54%), Gaps = 67/603 (11%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
+ L+ F +++N RI I D + N LR V E P+ LVP V+L N IAP + LELG
Sbjct: 159 YAILTRAFVLVNNTQSRIKIVDTLVNFLRVVTEADPDSLVPAVWLTTNAIAPPYVPLELG 218
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDT 311
+G + I KAL A G +K Y + GD G VA ++ Q+ +R+P PL+I+ V+++
Sbjct: 219 LGGSIISKALKTAYGLNSQGLKILYDKHGDAGDVAFEAKKRQTFTLRRPRPLSISGVYES 278
Query: 312 FRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQA 370
I++ G SQE K+ ++ LL E +YL+R L LRIG + T+L AL +A
Sbjct: 279 LLKISQSKGPGSQEAKQRIVEKLLQDTRGAEESRYLVRTLVQHLRIGAVKTTMLIALARA 338
Query: 371 -----------AVYNEQH-SK-PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGV 417
+VY+ SK I S A +IV+ ++ P Y ++P LL G+
Sbjct: 339 FLLSRPAASSFSVYSRTDLSKLKKEEIASIYNRAEEIVRACYARHPNYNDLIPCLLKVGI 398
Query: 418 WN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ L C T IP+ PML T+ +++++ K Q +FTCEYKYDG+RAQ+H G+V
Sbjct: 399 SDELLVRCGLTLHIPLRPMLGSITRDLTQMLTKLQGRKFTCEYKYDGQRAQVHCDSSGTV 458
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
I+SR+ ER T K+PD+V + R++ V SF+L+ EIVA ++ ++L FQTL+ RA+K
Sbjct: 459 SIFSRHLERMTDKYPDLVALIPRIRGEGVSSFILEGEIVAVNQGTGELLAFQTLTNRAKK 518
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSI 594
NV + IK+ VC++AFD+++ NG+PLL+ LR RRE L F + P F F ++ TS
Sbjct: 519 NVGIDSIKISVCLFAFDLMFLNGEPLLERPLRERRELLRGLFIDIPHHFTFVKSIDATSF 578
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDR--------------------------------D 622
D + + F A+DA CEGL++K +D D
Sbjct: 579 DSEAVLAFYKDALDAKCEGLMVKLLDDCVTPDMPEEESATKPISTSELPSAPASMELNVD 638
Query: 623 A----------TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
A TYEP KR +WLK+KKDY + D+LDL+PIAA+HG+G++ + LL
Sbjct: 639 AKHKGRRSLLSTYEPDKRLESWLKVKKDY-SAASDTLDLIPIAAWHGQGRKAKWWSPILL 697
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
A + +++ K +GF++ + E+ + +I +P Y + + P+VWFE
Sbjct: 698 AARNPETGLLEAVTKCMSGFTDKFYQANKEKYAEGSENIISRPN-YVEYRN--EPEVWFE 754
Query: 730 PTE 732
P E
Sbjct: 755 PQE 757
>gi|154292012|ref|XP_001546584.1| hypothetical protein BC1G_14933 [Botryotinia fuckeliana B05.10]
Length = 868
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 225/654 (34%), Positives = 341/654 (52%), Gaps = 80/654 (12%)
Query: 187 KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAH 246
+G + L+ F ++++ RI I D + N+LR ++E P+ L+P V+LA N I+P +
Sbjct: 174 EGGDASYALLTRCFVLVNSTQSRIKIVDTLVNLLRIIIEGDPDALLPTVWLATNAISPPY 233
Query: 247 EGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTI 305
LELG+G ++I KAL CG +K Y + GD G VA ++ QS +RKP PLTI
Sbjct: 234 ISLELGLGGSAISKALKNVCGLDSKSLKTLYNKHGDAGDVAFEAKKRQSFTLRKPKPLTI 293
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLL 364
V+ + IAK G S E K+ + LL A E +Y++R L LRIG + T+L
Sbjct: 294 KGVYQSLVKIAKTQGTGSSEIKQRVVDRLLQDARGAEESRYVVRTLCQHLRIGAVKTTML 353
Query: 365 AALGQAAVYNEQHSKPPPN---IQSPLE--------------EAAKIVKQVFSVLPVYEK 407
AL +A Q SKPP ++SP E + +IVK F+ P Y
Sbjct: 354 IALSRAF----QLSKPPGADFPLKSPQELAKLKKEGLTEVWSKGEEIVKACFAKRPNYND 409
Query: 408 IVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
+VP LL GV L C IP+ PML T+ ++E++ K Q +F+CEYKYDG+RA
Sbjct: 410 LVPVLLEIGVCEELLIRCGLALHIPLRPMLGSITRDLAEMLTKLQGRDFSCEYKYDGQRA 469
Query: 467 QIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP 526
Q+H E+G V I+SR+ E T K+PD+V + +++ V SF+++ E+V+ DRE + P
Sbjct: 470 QVHCDENGKVSIFSRHLELMTDKYPDLVALIPKIRGEGVDSFIMEGEVVSVDRETGDLKP 529
Query: 527 FQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
FQ+L+ RARK+V++ + ++VC+++FD++Y NG+ LL R RRE L F E P F
Sbjct: 530 FQSLANRARKDVAIGSVTINVCLFSFDLMYLNGESLLNRTFRERRELLRGLFVEVPNQFT 589
Query: 587 FATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMD------------------------ 620
+ ++ TS D + + +F A + CEG+++K +D
Sbjct: 590 WVKSIDATSQDSEVVLEFFKGATERKCEGIMVKILDNLPHATLPESEESSDEPMTSVLQT 649
Query: 621 ---------------------RDA---TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAA 656
R A TYEP KR +WLK+KKDY S D+LDL+P+AA
Sbjct: 650 SQKQSKGKRKPTDKEPEKKTRRKALLSTYEPDKRLDSWLKVKKDYSASY-DTLDLIPVAA 708
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR--SKVIPKPRP 714
+HG+G++ + LLA + +++CK +GFS+ + + + +P
Sbjct: 709 WHGQGRKAKFWSPILLAVRNEETGTLEAVCKCISGFSDTFYKANKEFYEEGGEHVLGGKP 768
Query: 715 YYRFADTISPDVWFEPTERPETSNSPASI--VYDSQITCLPSSYMPFSRSYFRF 766
Y +PDVWFEP E E + + +I VY + I L S S + RF
Sbjct: 769 NYVDYRGGNPDVWFEPQEVWEMAYADVTISPVYRAAIG-LVSDEKGLSLRFPRF 821
>gi|296824164|ref|XP_002850583.1| DNA ligase [Arthroderma otae CBS 113480]
gi|238838137|gb|EEQ27799.1| DNA ligase [Arthroderma otae CBS 113480]
Length = 824
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 250/771 (32%), Positives = 377/771 (48%), Gaps = 117/771 (15%)
Query: 65 MSAAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKT--------TNSVVGEKIQ-EVAEEP 115
M + +KK+ +PN S ++ T+ P T T+ + K+Q E +E
Sbjct: 1 MPSPSKKRKRIEPNELSQNTRSIASYFSSTRQPSTRLASGSELTDEELARKLQAEWNQED 60
Query: 116 SNDLVKPISNQI--DNPIDSEKES---------QPTPPSPKKRKVNVNSVSAKEKIAELK 164
ND I + I +NP E + +PT K + + S SA E +
Sbjct: 61 QNDAGSYIPSSIAAENPQQEEIHAPDGSTSTVIKPTTKDKPKGILALQSSSAAEDTISIS 120
Query: 165 SNIVLLKKKAGEFDP-----KMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCN 218
L +FDP K+ A WE G +V + L+ F +++ RI I DI+ N
Sbjct: 121 LPFDL---SPLDFDPLEQIKKLHAHWEADGGKVSYTVLARAFSLVNGTQSRIKIVDILVN 177
Query: 219 MLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQ 278
+LR ++ P+ L+P V+L+ N AP + +ELG+G ++I KAL +A G +K Y
Sbjct: 178 VLRFIIVGDPKSLLPAVWLSTNAFAPPYVPIELGLGGSAISKALKKAYGLDNQGLKSLYN 237
Query: 279 EMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVA 337
+ GD G VA ++ QS +R+P PLTI V+D+ IA G SQE K+ I+ LL
Sbjct: 238 KHGDAGDVAFEAKKKQSFTLRRPKPLTIQSVYDSLMQIASSKGTGSQETKQRIIEKLLQD 297
Query: 338 ATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPP--------------- 381
E +Y++R L LRIG + T+L AL +A +Y SK P
Sbjct: 298 TRGAEESRYIVRTLVQHLRIGAVKTTILIALARAFLY----SKSPTATYSIRSHADFTIL 353
Query: 382 -----PNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPM 435
NI S EE +K ++ P Y IVP LL G+ + L C T IP+ PM
Sbjct: 354 SKDGLANIYSQAEET---IKACYARHPNYNDIVPCLLEYGISSELLTMCGITLHIPLLPM 410
Query: 436 LAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVL 495
L T+ + +++ + FTCEYKYDG+RAQ+H G V I+SR+ E T K+PD+V
Sbjct: 411 LGSITRDLPQMLARLHSRSFTCEYKYDGQRAQVHCDASGKVSIFSRHLELMTDKYPDLVS 470
Query: 496 AVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDIL 555
V +++ V SF+L+ E+VA D+E ++LPFQTL+ RA+KNV + IKV+VC+++FD++
Sbjct: 471 LVPQIRSEDVSSFILEGEVVAVDKETGELLPFQTLTNRAKKNVEIGSIKVNVCLFSFDLM 530
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI--DLDEIQKFLDAAVDASCEG 613
Y NGQ LL R RRE L F E P F + ++ + D D + F + A+ CEG
Sbjct: 531 YLNGQQLLNRPFRERRELLRSLFIEIPNRFTWVKSIDAFPSDSDAVLNFFNDALQVKCEG 590
Query: 614 LIIKTMDRD-------------------------------------------------AT 624
+++K +D +T
Sbjct: 591 IMVKVLDDTPVESPGQMVDYAAILAGADLRSEVDELQEPTDIADTSEKQRGSRKRPLLST 650
Query: 625 YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQS 684
YEP KR +WLK+KKDY S D+LDL+PIAA+HG+G++ + LLA + ++
Sbjct: 651 YEPDKRLESWLKVKKDYSTS-SDTLDLIPIAAWHGQGRKAKWWSPILLAVRNPETGSLEA 709
Query: 685 ICKIGTGFSEAMLEERSSSL---RSKVIPKPRPYYRFADTISPDVWFEPTE 732
+ K +GF++ E + +I +P Y + P+VWF+P E
Sbjct: 710 VTKCMSGFTDKFYEANKAKYAEGSDNIISRPS-YVEYCG--EPEVWFQPQE 757
>gi|347841172|emb|CCD55744.1| similar to DNA ligase I [Botryotinia fuckeliana]
Length = 868
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 225/654 (34%), Positives = 341/654 (52%), Gaps = 80/654 (12%)
Query: 187 KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAH 246
+G + L+ F ++++ RI I D + N+LR ++E P+ L+P V+LA N I+P +
Sbjct: 174 EGGDASYALLTRCFVLVNSTQSRIKIVDTLVNLLRIIIEGDPDALLPTVWLATNAISPPY 233
Query: 247 EGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTI 305
LELG+G ++I KAL CG +K Y + GD G VA ++ QS +RKP PLTI
Sbjct: 234 ISLELGLGGSAISKALKNVCGLDSKSLKTLYNKHGDAGDVAFEAKKRQSFTLRKPKPLTI 293
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLL 364
V+ + IAK G S E K+ + LL A E +Y++R L LRIG + T+L
Sbjct: 294 KGVYQSLVKIAKTQGTGSSEIKQRVVDRLLQDARGAEESRYVVRTLCQHLRIGAVKTTML 353
Query: 365 AALGQAAVYNEQHSKPPPN---IQSPLE--------------EAAKIVKQVFSVLPVYEK 407
AL +A Q SKPP ++SP E + +IVK F+ P Y
Sbjct: 354 IALSRAF----QLSKPPGADFPLKSPQELAKLKKEGLTEVWSKGEEIVKACFAKRPNYND 409
Query: 408 IVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
+VP LL GV L C IP+ PML T+ ++E++ K Q +F+CEYKYDG+RA
Sbjct: 410 LVPVLLEIGVCEELLIRCGLALHIPLRPMLGSITRDLAEMLTKLQGRDFSCEYKYDGQRA 469
Query: 467 QIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP 526
Q+H E+G V I+SR+ E T K+PD+V + +++ V SF+++ E+V+ DRE + P
Sbjct: 470 QVHCDENGKVSIFSRHLELMTDKYPDLVALIPKIRGEGVDSFIMEGEVVSVDRETGDLKP 529
Query: 527 FQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
FQ+L+ RARK+V++ + ++VC+++FD++Y NG+ LL R RRE L F E P F
Sbjct: 530 FQSLANRARKDVAIGSVTINVCLFSFDLMYLNGESLLNRTFRERRELLRGLFVEVPNQFT 589
Query: 587 FATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMD------------------------ 620
+ ++ TS D + + +F A + CEG+++K +D
Sbjct: 590 WVKSIDATSQDSEVVLEFFKGATERKCEGIMVKILDNLPHATLPESEESSDEPMTSVLQT 649
Query: 621 ---------------------RDA---TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAA 656
R A TYEP KR +WLK+KKDY S D+LDL+P+AA
Sbjct: 650 SQKQSKGKRKPTDKEPEKKTRRKALLSTYEPDKRLDSWLKVKKDYSASY-DTLDLIPVAA 708
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR--SKVIPKPRP 714
+HG+G++ + LLA + +++CK +GFS+ + + + +P
Sbjct: 709 WHGQGRKAKFWSPVLLAVRNEETGTLEAVCKCISGFSDTFYKANKEFYEEGGEHVLGGKP 768
Query: 715 YYRFADTISPDVWFEPTERPETSNSPASI--VYDSQITCLPSSYMPFSRSYFRF 766
Y +PDVWFEP E E + + +I VY + I L S S + RF
Sbjct: 769 NYVDYRGGNPDVWFEPQEVWEMAYADVTISPVYRAAIG-LVSDEKGLSLRFPRF 821
>gi|408399590|gb|EKJ78689.1| hypothetical protein FPSE_01177 [Fusarium pseudograminearum CS3096]
Length = 881
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 221/644 (34%), Positives = 333/644 (51%), Gaps = 94/644 (14%)
Query: 177 FDP-----KMVACW-EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPED 230
FDP ++ W +G + L+ F +I+ T RI I D + N LR ++E P
Sbjct: 158 FDPAEYVDQLKEHWASEGGNASYALLTRCFILINGTTSRIKIVDTLVNCLRVLIEGDPAS 217
Query: 231 LVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKAS 290
L+P V+LA N I+P + +ELG+G ++I KAL ACG +K Y + GD G VA
Sbjct: 218 LLPAVWLATNAISPPYISMELGLGGSAISKALRNACGLDNRALKAIYDKHGDAGDVAFEV 277
Query: 291 RSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIR 348
+ QS +RKP PLTI V+++ IA G+ S + K+ + LL A E ++++R
Sbjct: 278 KKKQSFTLRKPKPLTIKAVYESLVKIASSQGQGSADTKQRIVDRLLQDARGGEESRFVVR 337
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLE------------------E 390
L LRIG + T+L AL +A + + PP PL+
Sbjct: 338 TLCQHLRIGAVKTTMLIALSRAFLLSR-----PPGADFPLKSVTDLAKLKKEDLAEVWGR 392
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGV-WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
A +IVK F+ P Y +VP LL G+ L C + +P+ PML T+ +SE++ K
Sbjct: 393 AEEIVKACFARHPNYNDLVPVLLEIGISEELLIRCGLSLHVPLRPMLGSITRDLSEMLTK 452
Query: 450 FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
Q +F CE+KYDG+RAQIH EDG V I+SR+ E T K+PD+V + +++ V SF+
Sbjct: 453 LQGRDFACEFKYDGQRAQIHCDEDGKVSIFSRHLEVMTDKYPDLVELIPKIRGEGVDSFI 512
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
++ E+VA DRE ++ FQTL+ RARK+V + I VDVC+++FD++Y NGQPLL R
Sbjct: 513 MEGEVVAVDRETGELKNFQTLTNRARKDVDIGAITVDVCMFSFDLMYLNGQPLLDRPFRE 572
Query: 570 RREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDR------ 621
RRE L F+E P F + +L TS D + + +F AA+D CEG+++K +D
Sbjct: 573 RRELLRSLFKEIPHHFTWVKSLDATSADSESVLEFFKAAIDIKCEGIMVKILDNLPLAPY 632
Query: 622 --------------------------------DATYE--------------PSKRSLNWL 635
D T E P KR +WL
Sbjct: 633 LGEGEEEGPGGSDRTLTPRSKSKGKGKSKGKKDETGERVKTRRKPLLATYEPDKRLDSWL 692
Query: 636 KLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEA 695
K+KKDY S D+LDL+P+AA+HG+G++ + L+AC + +++CK +GF+++
Sbjct: 693 KVKKDYNSSF-DTLDLIPVAAWHGQGRKAKWWSPILMACRNEETGSLEAVCKCMSGFTDS 751
Query: 696 MLE-ERSSSLRSKVIPKP------RPYYRFADTISPDVWFEPTE 732
+ R + + +P +P + PD+WFEP E
Sbjct: 752 FYKANRQFYDDGEDVGEPQNTRTTQPSFVEYSGPRPDIWFEPQE 795
>gi|154276266|ref|XP_001538978.1| hypothetical protein HCAG_06583 [Ajellomyces capsulatus NAm1]
gi|150414051|gb|EDN09416.1| hypothetical protein HCAG_06583 [Ajellomyces capsulatus NAm1]
Length = 1046
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 221/631 (35%), Positives = 339/631 (53%), Gaps = 75/631 (11%)
Query: 177 FDP-----KMVACW--EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE 229
FDP ++ W ++G + L+ F +I+N RI I D + N LR V E P+
Sbjct: 137 FDPSDYIEQLRTHWAFDRGH-ASYAILTRAFVLINNTQSRIKIVDTLVNFLRVVTEADPD 195
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA 289
LVP V+L N +AP + LELG+G + I KAL A G +K Y + GD G VA
Sbjct: 196 SLVPAVWLTTNAVAPPYVPLELGLGGSIISKALKTAYGLNSQGLKILYDKHGDAGDVAFE 255
Query: 290 SRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLI 347
++ Q+ +R+P PL+I V+++ I++ G SQE K+ ++ LL E +YL+
Sbjct: 256 AKKRQTFTLRRPRPLSIRGVYESLLKISQSKGPGSQEAKQRIVEKLLQDTRGAEESRYLV 315
Query: 348 RLLQSKLRIGLAEQTLLAALGQA-----------AVYNEQH-SK-PPPNIQSPLEEAAKI 394
R L LRIG + T+L AL +A +VY+ SK I S A +I
Sbjct: 316 RTLVQHLRIGAVKTTMLIALARAFLLSRPAASSFSVYSRTDLSKLKKEKIASIYNRAEEI 375
Query: 395 VKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDM 453
V+ ++ P Y ++P LL G+ + L C T IP+ PML T+ +++++ K Q
Sbjct: 376 VRACYARHPNYNDLIPCLLEVGISDELLVRCGLTLHIPLRPMLGSITRDLTQMLTKLQGR 435
Query: 454 EFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCE 513
+FTCEYKYDG+RAQ+H G+V I+SR+ ER T K+PD+V + R++ V SF+L+ E
Sbjct: 436 KFTCEYKYDGQRAQVHCDSSGTVSIFSRHLERMTEKYPDLVALIPRIRGEGVSSFILEGE 495
Query: 514 IVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREH 573
IVA ++ ++L FQTL+ RA+KNV + IK+ VC++AFD+++ NG+PLL+ LR RRE
Sbjct: 496 IVAVNQGTGELLAFQTLTNRAKKNVGIDSIKISVCLFAFDLMFLNGEPLLERPLRERREL 555
Query: 574 LYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD--------- 622
L F + P F F ++ TS+D + + F A+DA CEGL++K +D
Sbjct: 556 LRGLFIDIPHHFTFVKSIDATSLDSEAVLAFYKDALDAKCEGLMVKLLDDSVTPYMHEEE 615
Query: 623 ---------------------------------ATYEPSKRSLNWLKLKKDYIESIGDSL 649
+TYEP KR +WLK+KKDY + D+L
Sbjct: 616 SATKPISTSELPSAPASMELNVNAKHKDRRSLLSTYEPDKRLESWLKVKKDY-SAASDTL 674
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRS 706
DL+PIAA+HG+G++ + LLA + +++ K +GF++ + E+ +
Sbjct: 675 DLIPIAAWHGQGRKAKWWSPILLAARNPETGLLEAVTKCMSGFTDKFYQANKEKYAEGSE 734
Query: 707 KVIPKPRPYYRFADTISPDVWFEPTERPETS 737
+I +P Y + + P+VWFEP E E +
Sbjct: 735 NIISRPN-YVEYRN--EPEVWFEPQEVWEVA 762
>gi|238486842|ref|XP_002374659.1| DNA ligase I, putative [Aspergillus flavus NRRL3357]
gi|220699538|gb|EED55877.1| DNA ligase I, putative [Aspergillus flavus NRRL3357]
gi|391867635|gb|EIT76881.1| ATP-dependent DNA ligase I [Aspergillus oryzae 3.042]
Length = 827
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 242/755 (32%), Positives = 376/755 (49%), Gaps = 98/755 (12%)
Query: 65 MSAAAKKKPSPQPNSSSSSSSPKKRRTLDT--------------QTPKT---------TN 101
MS+ AKK+ P SSP + R++ + QTP T ++
Sbjct: 1 MSSPAKKRKRDVP-----VSSPYRNRSIASFFQGQAAKQADNAEQTPSTVSEDTDQTLSD 55
Query: 102 SVVGEKIQEVAEE----PSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAK 157
+ K+QE P++D P P ++ K+ + PP+ K +K N S+ +
Sbjct: 56 EALARKLQEEWNRQDAAPASDTQAPTGEPFATPSNT-KDDELEPPN-KTQKRNTLSLQSS 113
Query: 158 EKIAELKSNIVLLKKKAGEFDP-----KMVACWEK-GERVPFIFLSLVFDMISNETGRIL 211
+ S V + FD ++ W G + L+ F + + T RI
Sbjct: 114 TGTEDTISLAVPFDQSPLTFDSTKCAEELKGHWAATGGDASYALLTRAFVLANATTSRIK 173
Query: 212 ITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES 271
I D + N LR ++E P ++P V+LA N I+P ++ LELG+G +SI KAL + G
Sbjct: 174 IVDTLVNFLRVLIEADPSSVLPAVWLATNSISPPYDELELGLGGSSISKALKKIYGLNSQ 233
Query: 272 HVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNR 330
+K Y ++GD G VA ++ QS + KP PLT+ V+ + + IA G SQE K+
Sbjct: 234 GLKSLYDKLGDAGDVAFEAKKRQSFTLMKPKPLTVKGVYQSLQKIAMSKGTGSQETKQRI 293
Query: 331 IKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK---------- 379
++ LL E +Y++R L LRIG + T+L AL +A +Y++
Sbjct: 294 VEKLLQDTRGAEESRYIVRTLVQNLRIGAVKTTMLIALARAFLYSKPEGADFAVRSQQEL 353
Query: 380 ---PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPM 435
++ A +IVK ++ P Y +VP LL GV L C IP+ PM
Sbjct: 354 ACLKKEDLAEIYNNAEEIVKASYARHPDYNDLVPCLLEIGVTEELLVRCGLQLHIPLRPM 413
Query: 436 LAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVL 495
L T+ +SE++ K Q +FTCEYKYDG+RAQ+H E+G V I+SR+ E T K+PD+V
Sbjct: 414 LGSITRDLSEMLTKLQGRDFTCEYKYDGQRAQVHCDENGKVSIFSRHLENMTEKYPDLVS 473
Query: 496 AVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDIL 555
V +++ SV SF+L+ E+VA D+E ++ FQ L+ RA+KNV + IK++VC+++FD++
Sbjct: 474 LVPQIRGESVSSFILEGEVVAVDQETGELQAFQILTNRAKKNVDIGTIKINVCLFSFDLM 533
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEG 613
Y NG PLL R RRE L F E P F + + TS D + + +F A D CEG
Sbjct: 534 YLNGTPLLDRPFRERRELLRSLFVEIPNRFTWVKSFDATSADSEAVLEFFKGATDTKCEG 593
Query: 614 LIIKTMD------------------------------RDA---TYEPSKRSLNWLKLKKD 640
+++K +D R A TYEP KR +WLK+KKD
Sbjct: 594 IMVKVLDNVSKSNNPEPSETPNNDIDKPDPKPAKGGRRKALLSTYEPDKRLESWLKVKKD 653
Query: 641 YIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE-- 698
Y S ++LDL+P+ +HG+G++ + LLA + +++ K +GF++ +
Sbjct: 654 YSTS-SETLDLIPVGGWHGQGRKAKWWSPILLAVRNPETGSLEAVTKCMSGFTDKFYQAN 712
Query: 699 -ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
++ + VI +P + + PDVWFEP E
Sbjct: 713 KDKYTEGSPNVISRPSYVEYYGE---PDVWFEPQE 744
>gi|240278640|gb|EER42146.1| DNA ligase [Ajellomyces capsulatus H143]
Length = 844
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 216/603 (35%), Positives = 329/603 (54%), Gaps = 67/603 (11%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
+ L+ F +++N RI I D + N LR V E P+ LVP V+L N IAP + LELG
Sbjct: 159 YAILTRAFVLVNNTQSRIKIVDTLVNFLRVVTEADPDSLVPAVWLTTNAIAPPYVPLELG 218
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDT 311
+G + I KAL A G +K Y + GD G VA ++ Q+ +R+P PL+I+ V+++
Sbjct: 219 LGGSIISKALKTAYGLNSQGLKILYDKHGDAGDVAFEAKKRQTFTLRRPRPLSISGVYES 278
Query: 312 FRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQA 370
I++ G SQE K+ ++ LL E +YL+R L LRIG + T+L AL +A
Sbjct: 279 LLKISQSKGPGSQEAKQRIVEKLLQDTRGAEESRYLVRTLVQHLRIGAVKTTMLIALARA 338
Query: 371 -----------AVYNEQH-SK-PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGV 417
+VY+ SK I S A +IV+ ++ P Y ++P LL G+
Sbjct: 339 FLLSRPAASSFSVYSRTDLSKLKKEEIASIYNRAEEIVRACYARHPNYNDLIPCLLKVGI 398
Query: 418 WN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ L C T IP+ PML T+ +++++ K Q +FTCEYKYDG+RAQ+H G+V
Sbjct: 399 SDELLVRCGLTLHIPLRPMLGSITRDLTQMLTKLQGRKFTCEYKYDGQRAQVHCDSSGTV 458
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
I+SR+ ER T K+PD+V + R++ V SF+L+ EIVA ++ ++L FQTL+ RA+K
Sbjct: 459 SIFSRHLERMTDKYPDLVALIPRIRGEGVSSFILEGEIVAVNQGTGELLAFQTLTNRAKK 518
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSI 594
NV + IK+ VC++AFD+++ NG+PLL+ L+ RRE L F + P F F ++ TS
Sbjct: 519 NVGIDSIKISVCLFAFDLMFLNGEPLLERPLQERRELLRGLFIDIPHHFTFVKSIDATSF 578
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDR--------------------------------D 622
D + + F A+DA CEGL++K +D D
Sbjct: 579 DSEAVLAFYKDALDAKCEGLMVKLLDDCVTPDMPEEESATKPISTSELPSAPASMELNVD 638
Query: 623 A----------TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
A TYEP KR +WLK+KKDY + D+LDL+PIAA+HG+G++ + LL
Sbjct: 639 AKHKGRRSLLSTYEPDKRLESWLKVKKDY-SAASDTLDLIPIAAWHGQGRKAKWWSPILL 697
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
A + +++ K +GF++ + E+ + +I +P Y + + P+VWFE
Sbjct: 698 AARNPETGLLEAVTKCMSGFTDKFYQANKEKYAEGSENIISRPN-YVEYRN--EPEVWFE 754
Query: 730 PTE 732
P E
Sbjct: 755 PQE 757
>gi|169770701|ref|XP_001819820.1| DNA ligase 3 [Aspergillus oryzae RIB40]
gi|83767679|dbj|BAE57818.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 827
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 243/755 (32%), Positives = 376/755 (49%), Gaps = 98/755 (12%)
Query: 65 MSAAAKKKPSPQPNSSSSSSSPKKRRTLDT--------------QTPKT---------TN 101
MS+ AKK+ P SSP + R++ + QTP T ++
Sbjct: 1 MSSPAKKRKRDVP-----VSSPYRNRSIASFFQGQAAKQADNAEQTPSTVSEDTDQTLSD 55
Query: 102 SVVGEKIQEVAEE----PSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAK 157
+ K+QE P++D P P ++ K+ + PP+ K +K N S+ +
Sbjct: 56 EALARKLQEEWNRQDAAPASDTQAPTGEPFATPSNT-KDDELEPPN-KTQKRNTLSLQSS 113
Query: 158 EKIAELKSNIVLLKKKAGEFDP-----KMVACWEK-GERVPFIFLSLVFDMISNETGRIL 211
+ S V + FD ++ W G + L+ F + + T RI
Sbjct: 114 TGTEDTISLAVPFDQSPLTFDSTKCAEELKGHWAATGGDASYALLTRAFVLANATTSRIK 173
Query: 212 ITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES 271
I D + N LR ++E P ++P V+LA N I+P ++ LELG+G +SI KAL + G
Sbjct: 174 IVDTLVNFLRVLIEADPSSVLPAVWLATNSISPPYDELELGLGGSSISKALKKIYGLNSQ 233
Query: 272 HVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNR 330
+K Y ++GD G VA ++ QS + KP PLT+ V+ + + IA G SQE K+
Sbjct: 234 GLKSLYDKLGDAGDVAFEAKKRQSFTLMKPKPLTVKGVYQSLQKIAMSKGTGSQETKQRI 293
Query: 331 IKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN-------------EQ 376
++ LL E +Y++R L LRIG + T+L AL +A +Y+ E
Sbjct: 294 VEKLLQDTRGAEESRYIVRTLVQNLRIGAVKITMLIALARAFLYSKPEGADFAVRSQQEL 353
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPM 435
++ A +IVK ++ P Y +VP LL GV L C IP+ PM
Sbjct: 354 ACLKKEDLAEIYNNAEEIVKASYARHPDYNDLVPCLLEIGVTEELLVRCGLQLHIPLRPM 413
Query: 436 LAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVL 495
L T+ +SE++ K Q +FTCEYKYDG+RAQ+H E+G V I+SR+ E T K+PD+V
Sbjct: 414 LGSITRDLSEMLTKLQGRDFTCEYKYDGQRAQVHCDENGKVSIFSRHLENMTEKYPDLVS 473
Query: 496 AVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDIL 555
V +++ SV SF+L+ E+VA D+E ++ FQ L+ RA+KNV + IK++VC+++FD++
Sbjct: 474 LVPQIRGESVSSFILEGEVVAVDQETGELQAFQILTNRAKKNVDIGTIKINVCLFSFDLM 533
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEG 613
Y NG PLL R RRE L F E P F + + TS D + + +F A D CEG
Sbjct: 534 YLNGTPLLDRPFRERRELLRSLFVEIPNRFTWVKSFDATSADSEAVLEFFKGATDTKCEG 593
Query: 614 LIIKTMD------------------------------RDA---TYEPSKRSLNWLKLKKD 640
+++K +D R A TYEP KR +WLK+KKD
Sbjct: 594 IMVKVLDNVSKSNNPEPSETPNNDIDKPDPKPAKGGRRKALLSTYEPDKRLESWLKVKKD 653
Query: 641 YIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE-- 698
Y S ++LDL+P+ +HG+G++ + LLA + +++ K +GF++ +
Sbjct: 654 YSTS-SETLDLIPVGGWHGQGRKAKWWSPILLAVRNPETGSLEAVTKCMSGFTDKFYQAN 712
Query: 699 -ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
++ + VI +P + + PDVWFEP E
Sbjct: 713 KDKYTEGSPNVISRPSYVEYYGE---PDVWFEPQE 744
>gi|156102559|ref|XP_001616972.1| DNA ligase 1 precursor [Plasmodium vivax Sal-1]
gi|148805846|gb|EDL47245.1| DNA ligase 1 precursor, putative [Plasmodium vivax]
Length = 933
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 164/343 (47%), Positives = 239/343 (69%), Gaps = 1/343 (0%)
Query: 388 LEEAAKIVKQVFSVLPVYEKIVPALLT-DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEI 446
E K VK LP E I+ LL+ D + LS C+ G+P+ PMLAKPTKG+ E+
Sbjct: 511 FECMEKSVKSALCELPNIEIIIQNLLSGDDMNTLSKKCTVKAGLPVQPMLAKPTKGIQEV 570
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
+++F ++ FTCEYKYDGERAQIHY++ +++I+SRN E T K+PDV+ V
Sbjct: 571 LDRFNNVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQIVRDQIISGAT 630
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
++D E+VAYD E +KILPFQ L+TR RK+V + +IKV +C++ FD++ NG P+++E
Sbjct: 631 ECIIDSEVVAYDIENKKILPFQVLTTRKRKDVDIENIKVKICLFPFDLICCNGVPVIKEP 690
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYE 626
L +RR+ LY + + G +AT ++++I FL A++ +CEGL++KT+ +A+YE
Sbjct: 691 LEIRRKLLYSLLKCKDGVLCYATHSEMNNIEDIDIFLQDAIENNCEGLMVKTLLDNASYE 750
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
PS+RSLNWLK+KKDYIE + DS+DLVPIA ++G+GKR+GVYGAF+LA Y+S E FQ++C
Sbjct: 751 PSRRSLNWLKVKKDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLATYNSETENFQTVC 810
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
K GTGFS+ +L +L K+IP + YY +D ++PDVWF+
Sbjct: 811 KAGTGFSDEVLGSLYETLSDKIIPNKKSYYEVSDKLNPDVWFD 853
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 193 FIFLSLVFDMISNETG-----RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE 247
F FL+ F+ I G + + I+ N+ R ++ +P DL+P VY+ NK+AP +
Sbjct: 180 FTFLTNTFNQIEELKGSGTGSKKNVAIILSNVFRVLIYYSPNDLIPAVYITLNKVAPDYL 239
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP---LT 304
+E G+G+A I+K ++EA RTES +KK Q++ DLG++A+ S MR P LT
Sbjct: 240 NVEAGVGEALILKTMSEAYSRTESSIKKDLQQIEDLGIIAE---SCSCKMRTIFPLPRLT 296
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I VF+ + I +G +SQ+KK+ IK LLV+A E +Y++R LQ +LRIG+ T+L
Sbjct: 297 IQSVFNELKSIPNLSGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVL 356
Query: 365 AALGQAAV 372
AL A +
Sbjct: 357 QALSYAFI 364
>gi|46123877|ref|XP_386492.1| hypothetical protein FG06316.1 [Gibberella zeae PH-1]
Length = 881
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 219/644 (34%), Positives = 330/644 (51%), Gaps = 94/644 (14%)
Query: 177 FDP-----KMVACW-EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPED 230
FDP ++ W +G + L+ F +I+ T RI I D + N LR ++E P
Sbjct: 158 FDPAEYVDQLKEHWASEGGNASYALLTRCFILINGTTSRIKIVDTLVNCLRVLIEGDPAS 217
Query: 231 LVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKAS 290
L+P V+LA N I+P + +ELG+G ++I KAL ACG +K Y + GD G VA +
Sbjct: 218 LLPAVWLATNAISPPYISMELGLGGSAISKALRNACGLDNRALKAIYDKHGDAGDVAFEA 277
Query: 291 RSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIR 348
+ QS +RKP PLTI V+++ IA G+ S + K+ + LL A E ++++R
Sbjct: 278 KKKQSFTLRKPKPLTIKAVYESLVKIASSQGQGSADTKQRIVDRLLQDARGGEESRFVVR 337
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLE------------------E 390
L LRIG + T+L AL +A + + PP PL+
Sbjct: 338 TLCQHLRIGAVKTTMLIALSRAFLLSR-----PPGADFPLKSVTDLAKLKKEDLAEVWGR 392
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGV-WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
A +IVK F+ P Y IVP LL G+ L C IP+ PML T+ +SE++ K
Sbjct: 393 AEEIVKACFARHPNYNDIVPVLLEIGISEELLLRCGLALHIPLRPMLGSITRDLSEMLTK 452
Query: 450 FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
Q +F CE+KYDG+RAQIH E+G V I+SR+ E T K+PD+V + +++ V SF+
Sbjct: 453 LQGRDFACEFKYDGQRAQIHCDENGKVSIFSRHLEVMTDKYPDLVELIPKIRGEGVDSFI 512
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
++ E+VA DRE ++ FQTL+ RARK+V + I VDVC+++FD+++ NGQPLL R
Sbjct: 513 MEGEVVAVDRETGELKNFQTLTNRARKDVDIGAITVDVCMFSFDLMHLNGQPLLDRPFRE 572
Query: 570 RREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDR------ 621
RRE L F+E P F + +L TS D + + +F AA+D CEG+++K +D
Sbjct: 573 RRELLRSLFKEIPHHFTWVKSLDATSADSESVLEFFKAAIDIKCEGIMVKILDNLPSALY 632
Query: 622 --------------------------------DATYE--------------PSKRSLNWL 635
D T E P KR +WL
Sbjct: 633 LGEGEEEEPEGSDRILTPRSKSKGKGKSKGKKDETGEKVKTRRKPLLATYEPDKRLDSWL 692
Query: 636 KLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEA 695
K+KKDY S D+LDL+P+AA+HG+G++ + L+AC + +++CK +GF+++
Sbjct: 693 KVKKDYNSSF-DTLDLIPVAAWHGQGRKAKWWSPILMACRNEETGSLEAVCKCMSGFTDS 751
Query: 696 -------MLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
++ + +P + PD+WFEP E
Sbjct: 752 FYKANRQFYDDGEDGGEPQNTRTTQPSFVEYSGPRPDIWFEPQE 795
>gi|389585979|dbj|GAB68708.1| DNA ligase 1 precursor [Plasmodium cynomolgi strain B]
Length = 920
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 164/343 (47%), Positives = 238/343 (69%), Gaps = 1/343 (0%)
Query: 388 LEEAAKIVKQVFSVLPVYEKIVPALLT-DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEI 446
E K VK LP E I+ LL D + LS C+ G+P+ PMLAKPTKG+ E+
Sbjct: 498 FECMEKSVKSALCELPNIEIIIQNLLNGDDMNTLSKKCTVKAGLPVQPMLAKPTKGIQEV 557
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
+++F ++ FTCEYKYDGERAQIHY++ +++I+SRN E T K+PDV+ V
Sbjct: 558 LDRFNNVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQIVRDQIISGAT 617
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
++D E+VAYD E +KILPFQ L+TR RK+V + +IKV +C++ FD++ NG P+++E
Sbjct: 618 ECIIDSEVVAYDIENKKILPFQVLTTRKRKDVDIENIKVKICLFPFDLICCNGVPVIKEP 677
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYE 626
L +RR+ LY + + G +AT ++++I FL A++ +CEGL++KT+ +A+YE
Sbjct: 678 LEIRRKLLYSLLKCKDGVLCYATHSEMNNIEDIDIFLQDAIENNCEGLMVKTLLDNASYE 737
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
PS+RSLNWLK+KKDYIE + DS+DLVPIA ++G+GKR+GVYGAF+LA Y+S E FQ++C
Sbjct: 738 PSRRSLNWLKVKKDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLATYNSETENFQTVC 797
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
K GTGFS+ +L +L K+IP + YY +D ++PDVWF+
Sbjct: 798 KAGTGFSDEILGSLYETLSDKIIPNKKSYYEVSDKLNPDVWFD 840
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 193 FIFLSLVFDMISNETG-----RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE 247
F FL+ F+ I G + + I+ N+ R ++ +P DL+P VY+ NK+AP +
Sbjct: 177 FTFLTNTFNQIEELKGSGTGSKKNVAIILSNVFRVLIYYSPNDLIPAVYITLNKVAPDYL 236
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP---LT 304
+E G+G+A I+K ++EA RTES +KK Q++ DLG++A+ S MR P LT
Sbjct: 237 NVEAGVGEALILKTMSEAYSRTESSIKKDLQQIEDLGIIAE---SCSCKMRTIFPLPRLT 293
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I VF+ + I +G +SQ+KK+ IK LLV+A E +Y++R LQ +LRIG+ T+L
Sbjct: 294 IQSVFNELKSIPNLSGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVL 353
Query: 365 AALGQAAV 372
AL A +
Sbjct: 354 QALSYAFI 361
>gi|295660840|ref|XP_002790976.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281228|gb|EEH36794.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 850
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 214/626 (34%), Positives = 334/626 (53%), Gaps = 70/626 (11%)
Query: 177 FDPKMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
+ + A W +G + L+ F +++N RI I D + N+LR ++E P+ L+ V
Sbjct: 150 YAENLRAHWALEGGHASYAILTRAFVLVNNTQSRIKIVDTLVNLLRLLIEADPDSLIFAV 209
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
+LA N IAP + +ELG+G ++I KAL A G +K + + GD G VA ++ Q+
Sbjct: 210 WLATNAIAPPYVPVELGLGGSAISKALKTAYGLNNQGLKTLWDKYGDAGDVAFEAKKRQT 269
Query: 296 M-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSK 353
+RKP PL+I V+++ I++ G SQE K+ ++ LL A E +Y++R L
Sbjct: 270 FTLRKPKPLSIRGVYESLLKISRSKGPGSQEIKQRIVEKLLQDARGAEESRYIVRTLVQH 329
Query: 354 LRIGLAEQTLLAALGQAAVYNEQHSK-------------PPPNIQSPLEEAAKIVKQVFS 400
LRIG + T+L AL +A +Y+ +K + S A +IVK ++
Sbjct: 330 LRIGAVKTTMLIALARAFLYSRPSTKDFFVNNRTELSKLKREEMASIYSRAEEIVKASYA 389
Query: 401 VLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
P Y+ +V LL G+ + L C T +P+ PML T+ +++++ K Q FTCEY
Sbjct: 390 RHPSYDDLVSCLLEIGISDELLVRCGLTLHVPLHPMLGSITRDLAQMLTKLQGRAFTCEY 449
Query: 460 KYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR 519
KYDG+RAQ+H G V I+SR+ E T K+PD+V + R++ V SF+L+ EIVA ++
Sbjct: 450 KYDGQRAQVHCDSSGKVSIFSRHLELMTDKYPDLVALIPRIRGEGVSSFILEGEIVAVNQ 509
Query: 520 EKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFE 579
E ++L FQTL+ RA+KNV + I++ VC++AFD++ NG+PLL+ LR RRE L F
Sbjct: 510 ETGELLAFQTLTNRAKKNVGIESIEISVCLFAFDLMLLNGEPLLERPLRERRELLRGLFI 569
Query: 580 EEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD--------------- 622
E P F + L TS D + + F A+DA CEGL++K +D
Sbjct: 570 EVPHHFTWVKNLDATSSDSEAVLSFFKEAIDAKCEGLMVKLLDDSVQPELSKYESVAEPN 629
Query: 623 ---------------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+TYEP KR +WLK+KKDY + D+LDL+PIA
Sbjct: 630 LNSDLLLTTGPVEPNGNNKTRARRSLLSTYEPDKRLESWLKVKKDY-NAASDTLDLIPIA 688
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKP 712
A+HG+G++ + LLA + +++ K +GF++ + E+ + +I +P
Sbjct: 689 AWHGQGRKAKWWSPILLAVRNPETGMLEAVTKCISGFTDKFYQANKEKYAEGSDNIISRP 748
Query: 713 RPYYRFADTIS-PDVWFEPTERPETS 737
+ D S P+VWFEP E E +
Sbjct: 749 ----SYVDYRSEPEVWFEPQEVWEVA 770
>gi|336467135|gb|EGO55299.1| hypothetical protein NEUTE1DRAFT_85482 [Neurospora tetrasperma FGSC
2508]
gi|350288242|gb|EGZ69478.1| ATP-dependent DNA ligase [Neurospora tetrasperma FGSC 2509]
Length = 871
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 253/786 (32%), Positives = 400/786 (50%), Gaps = 97/786 (12%)
Query: 47 LNPRRKMSSSAPNA-----FQVLMSAAAKKKPSPQPNSSSSS---SSPKKRRTLDTQTPK 98
LN K S S P+ F A K+PSP P S S + D + +
Sbjct: 10 LNSGTKQSFSVPSRGLEYFFAKQKQNGASKEPSPLPKESDSQPIQQGSSEEHLNDEELAR 69
Query: 99 TTNSVVGEKIQEVAEEPSNDL-VKPISNQIDNPIDSE-----KESQPT-----PPSPKKR 147
+ + + + ND+ + ++ P+D++ ES P P + + +
Sbjct: 70 KLQAEWDAEARASSTPRENDVRSQDVAVSATEPVDTDGVEPTNESNPQTVTAPPKADRPK 129
Query: 148 KVNVNSVSAKEKIAELKSNIVLLKKKAGEFDP-----KMVACW--EKGERVPFIFLSLVF 200
N S+S+ + S + L + F+P ++ W ++G+ + L F
Sbjct: 130 GKNTLSLSSAAATEDQASASIPLDESPLTFNPSKYIHQLQESWATDRGD-ASYALLIRCF 188
Query: 201 DMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIK 260
++S+ T RI I D + N +R ++E P L+P V+LA N I+P + +ELG+G ++I K
Sbjct: 189 VLVSSTTSRIKIVDTLVNCVRLLIEGDPSSLLPAVWLATNAISPPYVSMELGLGGSAISK 248
Query: 261 ALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEA 319
AL + CG +K ++GD G VA ++ QS +RKP PLTI VF + I+K
Sbjct: 249 ALKQVCGLDNRSLKALNDKLGDPGDVAFEAKKKQSFTLRKPKPLTIKGVFQSLVKISKTQ 308
Query: 320 GKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHS 378
G+ S + K+ + LL A E +Y++R L + + + T+L AL +A + S
Sbjct: 309 GQGSGDVKQRIVDKLLQDARGGEESRYVVRTLCQHVTV---KTTMLIALARAFLL----S 361
Query: 379 KPP--------PNIQSPLEE---------AAKIVKQVFSVLPVYEKIVPALLTDGV-WNL 420
KPP PN + L++ A +IVK ++ P Y +VP LL GV L
Sbjct: 362 KPPGANIPTKDPNQLARLKKEELAEVYAKAEEIVKASYARHPDYNDLVPVLLEIGVSEEL 421
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
C T IP+ PML T+ +SE++++ Q +F CEYKYDG+RAQIH E G V I+S
Sbjct: 422 LVRCGLTLHIPLRPMLGGITRDLSEMLSRLQGRDFACEYKYDGQRAQIHCDERGVVSIFS 481
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
R+ E T K+PD+V V +++ V+SF+++ E+VA DR ++ FQTL+ RARK+V++
Sbjct: 482 RHLELMTDKYPDLVALVPKIRGEDVQSFIMEGEVVAVDRATGELKNFQTLTNRARKDVAI 541
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDE 598
I +DVC++AFD++Y NGQPLL R RR+ L F E P F + ++ TS + +
Sbjct: 542 GTITIDVCLFAFDLMYLNGQPLLNRSFRERRDMLRSLFVEIPHHFTWVKSIDATSQESET 601
Query: 599 IQKFLDAAVDASCEGLIIKTMDRD-----------------------------ATYEPSK 629
+ +F +AVD+ CEG+++K +D ATYEP K
Sbjct: 602 VLEFFKSAVDSKCEGIMVKILDNLPELEALGPDDNTNSIIPKEQKQSRRKPLLATYEPDK 661
Query: 630 RSLNWLKLKKDYI-ESIG-DSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
R +WLK+KKDYI S G D+LDL+PIAA+HG G++ + LLA + +++CK
Sbjct: 662 RLDSWLKVKKDYIGTSAGVDTLDLIPIAAWHGTGRKAKWWSPILLAVRNEETGSLEAVCK 721
Query: 688 IGTGFSEAMLE------ERSSSLRSKVIPK----PRPYYRFADTISPDVWFEPTERPETS 737
+GF+++ + ++ S S P+ +P + +PDVWFEP E E +
Sbjct: 722 CMSGFTDSFYKANREVYDKDGSFSSDGEPRNVHVAKPGFVEYAGGNPDVWFEPQEVWEVA 781
Query: 738 NSPASI 743
+ +I
Sbjct: 782 FADITI 787
>gi|302915439|ref|XP_003051530.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732469|gb|EEU45817.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 878
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 220/641 (34%), Positives = 329/641 (51%), Gaps = 90/641 (14%)
Query: 176 EFDPKMVACW-EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
++ P++ W +G + L+ F +IS T RI I D + N LR ++E P L+P
Sbjct: 159 KYIPQLKEHWASEGGNASYALLTRCFVLISGTTSRIKIVDTLVNCLRVLIEGDPTSLLPA 218
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
V+LA N I+P + LELG+G ++I KAL CG +K Y + GD G VA ++ Q
Sbjct: 219 VWLATNSISPPYISLELGLGGSAISKALRNVCGLDSKSLKAIYDKHGDAGDVAFEAKRKQ 278
Query: 295 SM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQS 352
S +RKP PLTI V+ + IA G+ S E K+ + LL A E ++++R L
Sbjct: 279 SFTLRKPKPLTIKAVYQSLVKIANSQGQGSGEAKQRLVDRLLQDARGGEESRFIVRTLCQ 338
Query: 353 KLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPL-----------EEAAKI------- 394
LRIG + T+L AL +A + + PP P+ EE A+I
Sbjct: 339 HLRIGAVKTTMLIALSRAFLLSR-----PPEADFPIRSASELSKLKKEELAEIWGRGEEL 393
Query: 395 VKQVFSVLPVYEKIVPALLTDGV-WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDM 453
VK F+ P Y+ +VP LL G+ L C IP+ PML T+ ++E++ K Q
Sbjct: 394 VKACFARRPNYDDLVPVLLEIGISEELLIRCGIALHIPLRPMLGSITRDLAEMLTKLQGR 453
Query: 454 EFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCE 513
+F CEYKYDG+RAQIH E G I+SR+ E T K+PD+V + +++ V SF+++ E
Sbjct: 454 DFACEYKYDGQRAQIHCDEHGKSTIFSRHLELMTDKYPDLVELMPKIRGEGVDSFIMEGE 513
Query: 514 IVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREH 573
+VA D+ ++ FQTL+ RARK+V++ I +DVC+++FD++Y NGQPLL R RRE
Sbjct: 514 VVAVDQATGELKNFQTLTNRARKDVAIGSITIDVCLFSFDLMYLNGQPLLDRPFRERREL 573
Query: 574 LYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLII--------------- 616
L F+E P F + +L TS D + + F +A + CEG+++
Sbjct: 574 LRSLFKEVPHHFTWVKSLDATSADSESVLDFFKSATENKCEGIMVKILDNLPALPYVGDA 633
Query: 617 ----------------------------------KTMDRD----ATYEPSKRSLNWLKLK 638
KT R ATYEP KR +WLK+K
Sbjct: 634 EEQEPEKAEKPAPKAKAKGKAKSKNTPGENGGETKTKSRRKPLLATYEPDKRLDSWLKVK 693
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEA--- 695
KDY S D+LDL+P+AA+HG+G+++ + L+AC + +++CK +GF++A
Sbjct: 694 KDYSSSF-DTLDLIPVAAWHGQGRKSKWWSPILMACRNEETGALEAVCKCMSGFTDAFYK 752
Query: 696 ----MLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
++ S K +P + PDVWFEP E
Sbjct: 753 ANREFYDDGEESEEPKNTRSQQPSFVEYSGPRPDVWFEPQE 793
>gi|225681998|gb|EEH20282.1| DNA ligase [Paracoccidioides brasiliensis Pb03]
Length = 850
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 215/626 (34%), Positives = 331/626 (52%), Gaps = 70/626 (11%)
Query: 177 FDPKMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
+ + A W +G + L+ F +++N RI I D + N+LR ++E P LV V
Sbjct: 150 YAENLRAHWALEGGHASYAILTRAFVLVNNTQSRIKIVDTLVNLLRLLIEADPGSLVFAV 209
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
+LA N IAP + +ELG+G ++I KAL A G +K + + GD G VA ++ Q+
Sbjct: 210 WLATNAIAPPYVPVELGLGGSAISKALKTAYGLNNQGLKALWDKFGDAGDVAFEAKKRQT 269
Query: 296 M-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSK 353
+RKP PL+I V+++ I++ G SQE K+ ++ LL A E +Y++R L
Sbjct: 270 FTLRKPKPLSIRGVYESLLKISRSKGPGSQEIKQRIVEKLLQDARGAEESRYIVRTLVQH 329
Query: 354 LRIGLAEQTLLAALGQAAVYNEQHSK-------------PPPNIQSPLEEAAKIVKQVFS 400
LRIG + T+L AL +A +Y+ +K + S A +IVK ++
Sbjct: 330 LRIGAVKTTMLIALARAFLYSRPSTKDFFVYNRIELSKLKKEEMASIYSRAEEIVKASYA 389
Query: 401 VLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
P Y+ +V LL G+ + L C T +P+ PML T+ + +++ K Q FTCEY
Sbjct: 390 RHPSYDDLVSCLLEIGISDELLMRCGLTLHVPLHPMLGSITRDLPQMLTKLQGRAFTCEY 449
Query: 460 KYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR 519
KYDG+RAQ+HY G V I+SR+ E T K+PD+V + R++ V SF+L+ EIVA ++
Sbjct: 450 KYDGQRAQVHYDSSGKVSIFSRHLELMTDKYPDLVALIPRIRGEGVSSFILEGEIVAVNQ 509
Query: 520 EKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFE 579
E ++L FQTL+ RA+KNV + IK+ +C++AFD++ NG+PLL+ LR RRE L F
Sbjct: 510 ETGELLAFQTLTNRAKKNVGIESIKISICLFAFDLMLLNGEPLLERPLRERRELLRGLFI 569
Query: 580 EEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD--------------- 622
E P F + L TS D + + F A DA CEGL++K +
Sbjct: 570 EVPHHFTWVKNLDATSSDSEAVLSFFKEATDAKCEGLMVKLLGGSVQPELSKDESVAEPN 629
Query: 623 ---------------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+TYEP KR +WLK+KKDY + D+LDL+PIA
Sbjct: 630 LNSDLILTTGPVEPNGNNKTRARRSLLSTYEPDKRLESWLKVKKDY-SAASDTLDLIPIA 688
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKP 712
A+HG+G++ + LLA + +++ K +GF++ + E+ + +I +P
Sbjct: 689 AWHGQGRKAKWWSPILLAVRNLETGMLEAVTKCISGFTDKFYQANKEKYAEGSDNIISRP 748
Query: 713 RPYYRFADTIS-PDVWFEPTERPETS 737
+ D S P+VWFEP E E +
Sbjct: 749 ----SYVDYRSEPEVWFEPQEVWEVA 770
>gi|378730069|gb|EHY56528.1| DNA ligase 1 [Exophiala dermatitidis NIH/UT8656]
Length = 878
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 225/708 (31%), Positives = 361/708 (50%), Gaps = 80/708 (11%)
Query: 98 KTTNSVVGEKIQEVAEEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAK 157
++ V + ++ + +D+ ++ ++ P D E+QP +K + + S +++
Sbjct: 86 ESNGHVPSSRAEDTKHKAEDDVKDFVAAALEEP-DPVAEAQPNRTVWQKNVLGLQSTASE 144
Query: 158 EKIAELK--SNIVLLKKKAGEFDPKMVACWE-KGERVPFIFLSLVFDMISNETGRILITD 214
E L + L + G++ ++ W G + L+ F ++++ RI I D
Sbjct: 145 EDTTTLTIPFDQSPLTFEPGKYVSELRRHWSADGGDASYALLTRCFVLVNSTQSRIKIVD 204
Query: 215 IVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVK 274
+ N LRT++E P+ L+P V+LA N I+P + LELG+G ++I KAL + CG + +K
Sbjct: 205 TLVNCLRTLIEADPDSLLPAVWLATNSISPPYISLELGLGGSAISKALKKVCGLDNAGLK 264
Query: 275 KQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKA 333
Y + GD G VA ++ QS +RKP PLTI + T IA G S E+K+ ++
Sbjct: 265 NLYDKHGDAGDVAFEAKKRQSFTLRKPKPLTIKGAYQTLVKIANSKGHGSVEQKQRLVER 324
Query: 334 LLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPP----------- 381
LL A E +Y++R L LRIG + T+L AL +A Q S+P
Sbjct: 325 LLQDARGPEESRYIVRTLVQHLRIGAVKTTMLIALARAF----QLSRPAGADFPVRNAAD 380
Query: 382 ------PNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGP 434
+ + +A ++VK F+ P Y +VP LL GV + L C IP+ P
Sbjct: 381 LATLKKDELATVWAKAEEVVKTCFARRPNYNDLVPGLLEVGVSDELLARCGLALHIPLRP 440
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
ML T+ +SE++ K Q +F+CE+KYDG+RAQ+H E G V I+SR+ E T K+PD+V
Sbjct: 441 MLGSITRDLSEMLTKLQGRDFSCEFKYDGQRAQVHCDERGKVSIFSRHLEVMTDKYPDLV 500
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDI 554
V ++ V SF+L+ E+VA DR ++ FQTL+ RA+K+V + I++DVC++AFD+
Sbjct: 501 ALVPEIRGDGVSSFILEGEVVAVDRNSGELKTFQTLTNRAKKDVDIGSIQIDVCLFAFDL 560
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCE 612
+Y NG+ LL R RR L F E+ F + ++ TS D + + +F +A D CE
Sbjct: 561 MYLNGEQLLDRPFRERRALLRSMFVEKEHHFTWVQSIDATSADSETVLEFFKSATDIKCE 620
Query: 613 GLIIKTMDR---------------------------------------------DATYEP 627
G+++K +D ATYEP
Sbjct: 621 GIMVKVLDNLPAQNPVLDANEPEEADPTIPVTPSKKGSKKSDGDKTSTTRRKALLATYEP 680
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
KR +WLK+KKDY S D++DLVP+A +HG+G++ + LLAC + + + K
Sbjct: 681 DKRLDSWLKVKKDYATS-ADTIDLVPVAGWHGQGRKAKWWSPILLACRNPETGSLEVVTK 739
Query: 688 IGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
+GF++ + E+ + V+ + Y ++ PDVWFEP E
Sbjct: 740 CISGFTDKFYQANKEKYAQGGDNVLGRKPAYIEYSGP-EPDVWFEPQE 786
>gi|121705708|ref|XP_001271117.1| DNA ligase I, putative [Aspergillus clavatus NRRL 1]
gi|119399263|gb|EAW09691.1| DNA ligase I, putative [Aspergillus clavatus NRRL 1]
Length = 834
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 230/686 (33%), Positives = 358/686 (52%), Gaps = 82/686 (11%)
Query: 115 PSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNV-NSVSAKEKIAELKSNIVLLKKK 173
P+N+ P S+ DN + +P PK +++ +SV ++ I + +L +
Sbjct: 80 PNNEPSLPASSSTDNGL------EPPRKVPKTHTLSLQSSVGTEDTIC----SAILFDQS 129
Query: 174 AGEFDPKMVAC-----W-EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETT 227
FD A W +G + L+ F + ++ T RI I D + N+LR ++E
Sbjct: 130 PLTFDSTKCAAELTVHWVAEGGNASYALLTRAFVLANSTTSRIKIVDTLVNLLRVLIEGD 189
Query: 228 PEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA 287
P ++P V+LA N I+P ++ +ELG+G +SI KAL + G +K Y GD G VA
Sbjct: 190 PTSVLPAVWLATNSISPPYKEVELGLGGSSISKALKKVYGLNPQGLKTLYDRYGDAGDVA 249
Query: 288 KASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQY 345
++ QS + KP PLTI V+ + R IA G SQE K+ ++ LL E +Y
Sbjct: 250 FEAKKRQSFTLMKPKPLTIKGVYQSLRKIATSKGSGSQESKQRIVEKLLQDTRGAEESRY 309
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNE-QHSKPPPNIQSPL------------EEAA 392
++R L LRIG + T+L AL +A +Y++ + ++ P Q L A
Sbjct: 310 IVRTLVQNLRIGAVKTTMLIALARAFLYSKPEGAEFPVRSQQNLARLKKEELTEVYNNAE 369
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ 451
+IVK ++ P Y +V LL GV + L C IP+ PML T+ +SE++ K Q
Sbjct: 370 EIVKASYARHPNYNDLVTCLLEIGVSDELLLRCGLQLHIPLRPMLGSITRDLSEMLTKLQ 429
Query: 452 DMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLD 511
F+CEYKYDG+RAQ+H + G V I+SR+ E T K+PD+V V +++ SV SF+L+
Sbjct: 430 GRGFSCEYKYDGQRAQVHCDDKGKVSIFSRHLENMTEKYPDLVSLVPQIRGESVSSFILE 489
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
E+VA D E ++ FQ L+ RA+KNV + I+++VC++AFD++Y NG+PLL R RR
Sbjct: 490 GEVVAVDNETGELQTFQVLTNRAKKNVDIGGIRINVCLFAFDLMYLNGEPLLDRPFRERR 549
Query: 572 EHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMD--------- 620
E L F E P F + +L TS D + + +F A+DA CEG+++K +D
Sbjct: 550 ELLRSLFVEIPNQFTWVKSLDATSADSETVLEFFKGALDAKCEGIMVKVLDNVPKANIKQ 609
Query: 621 ----------------------------RDA---TYEPSKRSLNWLKLKKDYIESIGDSL 649
R A TYEP KR +WLK+KKDY S ++L
Sbjct: 610 PQGDSTMTDGIANAAGEAPPEKPSKGARRKALLSTYEPDKRLESWLKVKKDYSTS-SETL 668
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRS 706
DL+P+A +HG+G++ + L+A + + +++ K +GF++ + ++ +
Sbjct: 669 DLIPVAGWHGQGRKAKWWSPILMAVRNPESGSLEAVTKCMSGFTDKFYQANKDKYAEGTP 728
Query: 707 KVIPKPRPYYRFADTISPDVWFEPTE 732
VI +P Y + PDVWFEP E
Sbjct: 729 NVISRP-AYVEYHG--EPDVWFEPQE 751
>gi|330923715|ref|XP_003300344.1| hypothetical protein PTT_11577 [Pyrenophora teres f. teres 0-1]
gi|311325552|gb|EFQ91558.1| hypothetical protein PTT_11577 [Pyrenophora teres f. teres 0-1]
Length = 873
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 230/709 (32%), Positives = 362/709 (51%), Gaps = 87/709 (12%)
Query: 105 GEKIQEVAEEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELK 164
G+ + +V + D V+P + + P + +E+ + P +K +++ S +++E +
Sbjct: 89 GKSMTDVTAKNDVDNVEP--SNVPLPNRTIQEAPESAPPKQKNTLSLQSTASEEDT--IT 144
Query: 165 SNIVLLKKKAGEFDPK-----MVACW-EKGERVPFIFLSLVFDMISNETGRILITDIVCN 218
+NI + EFDP+ + W G + L+ F ++++ T RI I D + N
Sbjct: 145 ANIPF-DQSPLEFDPQDYIPDLQKHWVADGGHATYALLTRCFILVNSTTSRIKIVDTLVN 203
Query: 219 MLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQ 278
+LRT++E+ P L+P V+LA N I+P + LELG+G ++I KAL + CG + +K
Sbjct: 204 LLRTIIESDPSSLLPAVWLATNAISPPYIDLELGLGGSAISKALKKVCGLDNAGLKVLNN 263
Query: 279 EMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVA 337
+ GD G VA ++ QS +RKP PLTI VF++ IA G S E K+ ++ L+
Sbjct: 264 KYGDAGDVAFEAKKKQSFTLRKPKPLTIKSVFESLVKIANSKGHGSVENKQRIVERLVQD 323
Query: 338 ATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQA--------AVYNEQHSKPPPNIQSP- 387
A E +Y++R L LRIG + T+L AL +A A + + K ++
Sbjct: 324 ARGAEESRYIVRTLVQHLRIGAVKTTMLIALSRAFMLSKPLGAEFEIRDRKDMAKLKKEE 383
Query: 388 ----LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKG 442
+IVK F+ P Y ++P LL GV L C T IP+ PML T+
Sbjct: 384 LTEIYSRNEEIVKACFARRPNYNDLIPVLLEIGVCEELLVRCGLTLHIPLRPMLGSITRD 443
Query: 443 VSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKK 502
+ E++ K Q +F CEYKYDG+RAQ+H + G V I+SR+ E T K+PD+V V +++
Sbjct: 444 MGEMLTKLQGRDFACEYKYDGQRAQVHCDDKGKVTIFSRHLEVMTDKYPDLVALVPKIRG 503
Query: 503 PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPL 562
V SF+L+ E+VA DRE + FQTL+ RARK+V + + +DVC++AFD++Y NG+ L
Sbjct: 504 EGVSSFILEGEVVAVDRESGDLKTFQTLANRARKDVVIGAVTIDVCLFAFDLMYLNGEEL 563
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMD 620
L R RR L F E P F + +L TS D++ +Q F +A+D CEG+++K +D
Sbjct: 564 LNRPFRERRSLLKSLFVEIPHHFTWVKSLDATSADVEAVQSFFQSALDIKCEGIMVKMLD 623
Query: 621 RD--------------------------------------------------ATYEPSKR 630
+ +TYEP KR
Sbjct: 624 NNPPIPDLVPDPDQPTTPKKPKKKAAKSSKSSAVKDDSSTTTTKPSRRKPLLSTYEPDKR 683
Query: 631 SLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGT 690
WLK+KKDY + ++LDL+PIAAFHG G++ + LLA ++ + ++ K +
Sbjct: 684 LDAWLKVKKDY-STTSETLDLIPIAAFHGSGRKAAWWSPILLAVRNAETGQLDAVTKCMS 742
Query: 691 GFSEAMLEERSSSL-----RSKVIPKPRP-YYRF-ADTISPDVWFEPTE 732
GF++A V+ +P + R+ +P VWFEP E
Sbjct: 743 GFTDAFYRANRKKYDPDDPECTVVLGQKPSFVRYNGGAGTPAVWFEPHE 791
>gi|300708465|ref|XP_002996411.1| hypothetical protein NCER_100511 [Nosema ceranae BRL01]
gi|239605711|gb|EEQ82740.1| hypothetical protein NCER_100511 [Nosema ceranae BRL01]
Length = 592
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 191/538 (35%), Positives = 311/538 (57%), Gaps = 25/538 (4%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F++ S + + IS +GRI I D++ R V+ DL+ V+YL + I P ++ +L
Sbjct: 10 FLYFSKIMEKISQRSGRIEIQDMLTEYFRDVISINKNDLIYVIYLCTHTIYPEYKNQQLN 69
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTF 312
+G+ + L E + + +KK+Y ++GD G + R+ Q + K L+ V
Sbjct: 70 LGEKILFDVLKECTSKDITILKKEYTKIGDFGTIGMTYRTRQLFISKK-TLSAKDVVYAL 128
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
R IA+ +G S+ K ++ L+ + T E ++L RL + L++ A +T+LAA A +
Sbjct: 129 REIAEISGIKSRIYKIRKMLDLISSCTPIEIKFLFRLFEENLKVKFALKTVLAAF--AKL 186
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
Y+ + +K+ ++ P E++V +LT+G+ + + PGIP+
Sbjct: 187 YDSAYIDK--------------IKEAYNRRPDIEQLVIEILTNGISTVDTNFNIEPGIPL 232
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
PMLA+PTK +S + ++ +FTCE KYDGER QIH + + +YSRN E T K+ D
Sbjct: 233 KPMLAQPTKNISTAFKRVENKKFTCENKYDGERIQIH-RHNNQMTLYSRNLENTTDKYFD 291
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAF 552
+++ K + + FV+D E+VAYD E++KIL FQ LSTR RK+ S + V+VC++ F
Sbjct: 292 III-----KSNTDKDFVIDGEVVAYDPEQKKILTFQKLSTRKRKDFSKKET-VNVCVFVF 345
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCE 612
DILY +G L+ + L RR L+ F E G F F+ +++E+ +F ++++ E
Sbjct: 346 DILYFDGLELINKSLEDRRAILHKEFTEVEGKFFFSEFKDCENIEEVDEFFRQSINSQYE 405
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
G++IK + + Y PS+R +W+KLKKDYIES DS DLV + A++G+GKRTG YG FLL
Sbjct: 406 GIMIKLLGDGSNYIPSQRCNSWIKLKKDYIESGSDSFDLVVVGAYYGKGKRTGWYGGFLL 465
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
A Y+ N+E F+++CKIGTGF +++L + + + V+ P ++ + PDVW P
Sbjct: 466 ASYNENDEMFETVCKIGTGFDDSLLSKLYEEVNNYVVSIPSR-VKYKEQTKPDVWITP 522
>gi|226289172|gb|EEH44684.1| DNA ligase [Paracoccidioides brasiliensis Pb18]
Length = 1055
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 215/620 (34%), Positives = 329/620 (53%), Gaps = 70/620 (11%)
Query: 183 ACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANK 241
A W +G + L+ F +++N RI I D + N+LR ++E P LV V+LA N
Sbjct: 156 AHWALEGGHASYAILTRAFVLVNNTQSRIKIVDTLVNLLRLLIEADPGSLVFAVWLATNA 215
Query: 242 IAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKP 300
IAP + +ELG+G ++I KAL A G +K + + GD G VA ++ Q+ +RKP
Sbjct: 216 IAPPYVPVELGLGGSAISKALKTAYGLNNQGLKALWDKFGDAGDVAFEAKKRQTFTLRKP 275
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLA 359
PL+I V+++ I++ G SQE K+ ++ LL A E +Y++R L LRIG
Sbjct: 276 KPLSIRGVYESLLKISRSKGPGSQEIKQRIVEKLLQDARGAEESRYIVRTLVQHLRIGAV 335
Query: 360 EQTLLAALGQAAVYNEQHSK-------------PPPNIQSPLEEAAKIVKQVFSVLPVYE 406
+ T+L AL +A +Y+ +K + S A +IVK ++ P Y+
Sbjct: 336 KTTMLIALARAFLYSRPSTKDFFVYNRIELSKLKKEEMASIYSRAEEIVKASYARHPSYD 395
Query: 407 KIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGER 465
+V LL G+ + L C T +P+ PML T+ + +++ K Q FTCEYKYDG+R
Sbjct: 396 DLVSCLLEIGISDELLVRCGLTLHVPLHPMLGSITRDLPQMLTKLQGRAFTCEYKYDGQR 455
Query: 466 AQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKIL 525
AQ+HY G V I+SR+ E T K+PD+V + R++ V SF+L+ EIVA ++E ++L
Sbjct: 456 AQVHYDSSGKVSIFSRHLELMTDKYPDLVALIPRIRGEGVSSFILEGEIVAVNQETGELL 515
Query: 526 PFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFF 585
FQTL+ RA+KNV + IK+ +C++AFD++ NG+PLL+ LR RRE L F E P F
Sbjct: 516 AFQTLTNRAKKNVGIESIKISICLFAFDLMLLNGEPLLERPLRERRELLRGLFIEVPHHF 575
Query: 586 QFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD--------------------- 622
+ L TS D + + F A DA CEGL++K +
Sbjct: 576 TWVKNLDATSSDSEAVLSFFKEATDAKCEGLMVKLLGGSVQPELSKEESVAEPNLNSDLI 635
Query: 623 ---------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
+TYEP KR +WLK+KKDY + D+LDL+PIAA+HG+G
Sbjct: 636 LTTGHVEPNGNNKTRARRSLLSTYEPDKRLESWLKVKKDY-SAASDTLDLIPIAAWHGQG 694
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRF 718
++ + LLA + +++ K +GF++ + E+ + +I +P +
Sbjct: 695 RKAKWWSPILLAVRNLETGMLEAVTKCISGFTDKFYQANKEKYAEGSDNIISRP----SY 750
Query: 719 ADTIS-PDVWFEPTERPETS 737
D S P+VWFEP E E +
Sbjct: 751 VDYRSQPEVWFEPQEVWEVA 770
>gi|221060727|ref|XP_002261933.1| DNA ligase 1 [Plasmodium knowlesi strain H]
gi|193811083|emb|CAQ41811.1| DNA ligase 1, putative [Plasmodium knowlesi strain H]
Length = 924
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 163/343 (47%), Positives = 238/343 (69%), Gaps = 1/343 (0%)
Query: 388 LEEAAKIVKQVFSVLPVYEKIVPALLT-DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEI 446
E K VK LP E I+ LL D + LS C+ G+P+ PMLAKPTKG+ E+
Sbjct: 502 FECMEKSVKSALCELPNIEIIIQNLLNGDDMNTLSKKCTVKAGLPVQPMLAKPTKGIQEV 561
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
+++F ++ FTCEYKYDGERAQIHY++ +++I+SRN E T K+PDV+ V
Sbjct: 562 LDRFNNVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLETMTEKYPDVIQIVRDQIISGAT 621
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
++D E+VAYD E +KILPFQ L+TR RK+V + +IKV +C++ FD++ NG P+++E
Sbjct: 622 ECIIDSEVVAYDIENKKILPFQVLTTRKRKDVDIENIKVKICLFPFDLICCNGVPVIKEP 681
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYE 626
L +RR+ LY + + G +AT +++++ FL A++ +CEGL++KT+ +A+YE
Sbjct: 682 LEIRRKLLYSLLKCKEGVLCYATHSEMNNVEDMDIFLQDAIENNCEGLMVKTLLDNASYE 741
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
PS+RSLNWLK+KKDYIE + DS+DLVPIA ++G+GKR+GVYGAF+LA Y+S E FQ++C
Sbjct: 742 PSRRSLNWLKVKKDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLATYNSETENFQTVC 801
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
K GTGFS+ +L +L K+IP + YY +D ++PDVWF+
Sbjct: 802 KAGTGFSDEILGSLYDTLSDKIIPSKKSYYEVSDKLNPDVWFD 844
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 193 FIFLSLVFDMISNETG-----RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE 247
F FL+ F+ I G + + I+ N+ R ++ +P DL+P VY+ NK+AP +
Sbjct: 180 FTFLTNTFNQIEELKGSGTGSKKNVAIILSNVFRVLIYYSPNDLIPAVYITLNKVAPDYL 239
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP---LT 304
+E G+G+A I+K ++EA RTES +KK Q++ DLG++A+ S MR P LT
Sbjct: 240 NVEAGVGEALILKTMSEAYSRTESSIKKDLQQIEDLGIIAE---SCSCKMRTIFPLPRLT 296
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I VF+ + I +G +SQ+KK+ IK LLV+A E +Y++R LQ +LRIG+ T+L
Sbjct: 297 IQSVFNELKSIPNLSGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVL 356
Query: 365 AALGQAAV 372
AL A +
Sbjct: 357 QALSYAFI 364
>gi|358372235|dbj|GAA88839.1| DNA ligase I [Aspergillus kawachii IFO 4308]
Length = 837
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 230/694 (33%), Positives = 353/694 (50%), Gaps = 87/694 (12%)
Query: 112 AEEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAEL-----KSN 166
A+ PS++L SN DN + +PT KK +++ S + E L +S
Sbjct: 78 ADTPSDELTSAQSNTGDN------DREPTKLQ-KKGVLSLQSSTGTEDTVSLAVPFDQSP 130
Query: 167 IVLLKKKAGEFDPKMVACW-EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVME 225
I A ++ ++ W +G + L+ F + + T RI I D + N LR ++E
Sbjct: 131 IAF---DASKYARELQGHWASEGGDASYALLTRAFVLANATTSRIKIVDTLVNFLRVLIE 187
Query: 226 TTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGL 285
P ++P V+LA N I+P ++ LELG+G +SI KAL + G +K Y + GD G
Sbjct: 188 ADPSSVLPAVWLATNSISPPYDELELGLGGSSISKALKKVYGLNSQGLKTLYDKHGDAGD 247
Query: 286 VAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-P 343
VA ++ QS + KP PL I V+ + + IA G SQE K+ ++ LL A E
Sbjct: 248 VAFEAKKRQSFTLMKPKPLRIKGVYQSLKKIAMSKGSGSQETKQRIVEKLLQDARGAEES 307
Query: 344 QYLIRLLQSKLRIGLAEQTLLAALGQAAVYN-------------EQHSKPPPNIQSPLEE 390
+Y++R L LRIG + T+L AL +A +Y+ E +
Sbjct: 308 RYIVRTLVQNLRIGAVKTTMLIALARAFLYSKPKGAEFSIYSQKEMAQMKKEELAEIYGN 367
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
A ++VK ++ P Y+ +VP LL G + L C IP+ PML T+ +S+++ K
Sbjct: 368 AEEVVKASYARHPDYDDLVPCLLEVGATDELLVRCGLQLHIPLRPMLGSITRDLSDMLTK 427
Query: 450 FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
Q +F+CEYKYDG+RAQ+H G V I+SR+ E T K+PD+V V ++ V SF+
Sbjct: 428 LQGRDFSCEYKYDGQRAQVHCDVQGKVSIFSRHLENMTEKYPDLVSLVPEIRGEGVSSFI 487
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
L+ E+VA D+E ++ FQ L+ RA+KNV + IKV+VC++AFD++Y NGQPLL LR
Sbjct: 488 LEGEVVAVDQETGELQAFQILTNRAKKNVDIGAIKVNVCLFAFDLMYLNGQPLLDRSLRE 547
Query: 570 RREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMD------- 620
RRE L F E P F + +L TS D + + +F +A D CEG+++K +D
Sbjct: 548 RRELLRSLFVEIPKRFTWVKSLDATSADSEAVLEFFKSATDTKCEGIMVKVLDNMPKPDL 607
Query: 621 ------------------------------------RDA---TYEPSKRSLNWLKLKKDY 641
R A TYEP KR +WLK+KKDY
Sbjct: 608 EGVETPAVDTATNGTPTTPGQSTTNMTDNKPSKNTRRKALLSTYEPDKRLESWLKVKKDY 667
Query: 642 IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE--- 698
S ++LDL+P+A +HG+G++ + LLA + +++ K +GF++ +
Sbjct: 668 STS-SETLDLIPVAGWHGQGRKAKWWSPILLAVRNPETGSLEAVTKCMSGFTDKFYQANK 726
Query: 699 ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
++ + VI +P + + PDVWFEP E
Sbjct: 727 DKYAEGTPNVISRPSYVEYYGE---PDVWFEPQE 757
>gi|67537426|ref|XP_662487.1| hypothetical protein AN4883.2 [Aspergillus nidulans FGSC A4]
gi|40741771|gb|EAA60961.1| hypothetical protein AN4883.2 [Aspergillus nidulans FGSC A4]
gi|259482254|tpe|CBF76559.1| TPA: DNA ligase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 816
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 249/740 (33%), Positives = 374/740 (50%), Gaps = 99/740 (13%)
Query: 84 SSPKKRRTLDTQTPKTTNSVV-------GEKIQEVA-----EEPSND--LVKPISNQIDN 129
SSP K+R DTQ ++ S EK +++A E+ +D L + + + +N
Sbjct: 2 SSPAKKRKRDTQPTRSIASFFQGQTAKQTEKSEQLASLADTEQHLSDEALARKLQAEWNN 61
Query: 130 PID-----SEKESQPTPPSP--------KKRKVNVNSVSAKEKIAELKSNIVLLKKKAGE 176
D + S+PT SP KK KV V S+ + + S V +
Sbjct: 62 EQDFASPATVPHSEPTAASPSPEKDREQKKAKVGVLSLQSSTGTEDTISLSVPFDQSPLV 121
Query: 177 FDP-----KMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPED 230
FD ++ A W +G + L+ F + ++ T RI I D + N LR ++E P
Sbjct: 122 FDSSRYAGELKAHWSAEGGNASYALLTRAFVLANSTTSRIKIVDTLVNFLRVLIEGDPSS 181
Query: 231 LVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKAS 290
++P V+LA N I+P + LELG+G +SI KA + G +K Y +GD G VA +
Sbjct: 182 VLPAVWLATNSISPPYHELELGLGGSSISKAFKKIYGLNSQGLKSLYDRLGDAGDVAFEA 241
Query: 291 RSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIR 348
+ QS + KP PL+I V+ + IA G SQE K+ ++ LL E +Y++R
Sbjct: 242 KKRQSFTLIKPKPLSIKGVYQSLIKIAMSKGSGSQELKQRIVEKLLQDTRGAEESRYIVR 301
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNE----------QHS------KPPPNIQSPLEEAA 392
L LRIG + T+L AL +A + ++ QH + I S EE
Sbjct: 302 TLVQNLRIGAVKTTMLIALARAFLVSKPDNATFTVHSQHELARLKKEELAEIYSSAEE-- 359
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ 451
+VK ++ P Y +VP LL GV L C IP+ PML T+ +SE++ K Q
Sbjct: 360 -LVKASYARHPNYNDLVPCLLEIGVTEELLLRCGLQLHIPLMPMLGSITRDLSEMLTKLQ 418
Query: 452 DMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLD 511
+FTCE+KYDG+RAQ+H E G V I+SR+ E T K+PD+V V +++ V SF+L+
Sbjct: 419 GRDFTCEFKYDGQRAQVHCDEAGKVSIFSRHLEEMTEKYPDLVSLVPQIRGEGVSSFILE 478
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
E+VA D+ + + PFQ L+ RA+KNV + +IK++VC++AFD++Y NG PLL+ LR RR
Sbjct: 479 GEVVAVDQNGE-LQPFQILTNRAKKNVDIGEIKINVCLFAFDLMYLNGAPLLERSLRERR 537
Query: 572 EHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDR-------D 622
E L F E P F + +L TS D + + F +A + CEG+++K +D D
Sbjct: 538 ELLRSLFMEIPNRFTWVKSLDATSADSEAVLDFFKSATENKCEGIMVKVLDNTLATNGSD 597
Query: 623 AT---------------------------YEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+T YEP KR +WLK+KKDY S ++LDL+P+A
Sbjct: 598 STNSSITATPKAEAKETKKGGRRKALLSSYEPDKRLESWLKVKKDYSAS-SETLDLIPVA 656
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKP 712
+HG G++ + LLA + Q++ K +GFS+ + E+ VI +P
Sbjct: 657 GWHGNGRKAKWWSPILLAVRNPETGGLQAVTKCMSGFSDKFYQANKEKYEEGSPNVISRP 716
Query: 713 RPYYRFADTISPDVWFEPTE 732
Y + PDVWFEP E
Sbjct: 717 -SYVEYNG--EPDVWFEPQE 733
>gi|402087588|gb|EJT82486.1| DNA ligase 1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 871
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 218/635 (34%), Positives = 334/635 (52%), Gaps = 79/635 (12%)
Query: 176 EFDPKMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
++ ++ A W G + L+ F ++S RI I D + N +R ++ET P L+P
Sbjct: 155 QYTDQLKAQWSTDGGNASYALLTRCFVLVSGTNSRIKIVDTLVNCIRILIETDPTSLLPA 214
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
V+LA N I+P + LELG+G ++I KAL + CG +K Y + GD G VA ++ Q
Sbjct: 215 VWLATNAISPPYISLELGLGGSAISKALKQVCGLDNRSLKAIYDKHGDPGDVAFEAKKKQ 274
Query: 295 S-MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQS 352
S M+R+P PLTI VF + IAK G+ S + K+ + LL A E ++++R L
Sbjct: 275 SFMLRRPKPLTIKGVFQSLVKIAKSQGQGSVQAKQQIVDRLLQDARGGEESRFIVRTLCQ 334
Query: 353 KLRIGLAEQTLLAALGQAAVYNEQH-----SKPPPNI-QSPLEEAAKI-------VKQVF 399
LRIG + T+L AL +A V ++ ++ P + Q +E A+I VK F
Sbjct: 335 HLRIGAVKTTMLIALSRAFVLSKPDGADFATRHPAQLNQLKKDELAEIWARGEEIVKACF 394
Query: 400 SVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
+ P Y+ +VP LL G+ L C T IP+ PML T+ ++E++ K Q +F CE
Sbjct: 395 ARRPNYDDLVPTLLELGITEELLLRCGLTLHIPLRPMLGSITRDLAEMLTKLQGRDFACE 454
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
+KYDG+RAQ+H E G+V I+SR+ E T K+PD+V + +++ V SFVL+ E+VA D
Sbjct: 455 FKYDGQRAQVHCDEKGTVSIFSRHLELMTDKYPDLVALIPKIRGQGVESFVLEGEVVAVD 514
Query: 519 REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
R+ ++ FQTL+ RARK+V + I VDVC++AFD+++ NGQPLL + R RRE L F
Sbjct: 515 RQTGELKNFQTLTNRARKDVEIGSITVDVCLFAFDLMFLNGQPLLDKPFRQRRELLKSLF 574
Query: 579 EEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDR--DATY--------- 625
P F + +L TS D + + +F AA DA CEGL++K +D D Y
Sbjct: 575 VHVPHHFTWVKSLDATSQDSETVLEFFKAATDAKCEGLMVKILDNLPDLAYQGDMATEGV 634
Query: 626 -----------------------------------------EPSKRSLNWLKLKKDYIES 644
EP KR +WLK+KKDY +
Sbjct: 635 PEPDKATVKPSSKGKGKGKEKAKSGEPEKKKSRRKPLLATYEPDKRLDSWLKVKKDYNIN 694
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE------ 698
D+LDL+P+AA+HG+G++ + L+A + + +++ K +GF++A +
Sbjct: 695 F-DTLDLIPVAAWHGQGRKAKWWSPILMAVRNDDTGSLEAVTKCMSGFTDAFYKANKLFY 753
Query: 699 -ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
+ + + +P + PDVWFEP E
Sbjct: 754 NDGADGSERQNTRAQKPAFIEYSGPEPDVWFEPQE 788
>gi|440640364|gb|ELR10283.1| hypothetical protein GMDG_04669 [Geomyces destructans 20631-21]
Length = 883
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 223/657 (33%), Positives = 339/657 (51%), Gaps = 90/657 (13%)
Query: 179 PKMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYL 237
P + W G + + F ++++ RI I D + N+LRT++E P L+P V+L
Sbjct: 179 PDLQKQWAGHGGNASYALVIRCFVLVNSTQSRIKIVDTLVNLLRTIIEGDPSSLLPTVWL 238
Query: 238 AANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM- 296
A N I+P + LELG+G ++I KAL +ACG + +K Y ++GD G VA ++ Q+
Sbjct: 239 ATNAISPPYISLELGLGGSAISKALKQACGLDSNSLKALYNKVGDAGDVAFEAKKRQTFT 298
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLR 355
+RKP PLTI V+D+ IA G S E+K+ + LL A E +YL+R L LR
Sbjct: 299 LRKPKPLTIKTVYDSLVQIATVQGTGSGERKQRIVDKLLQDARGPEESRYLVRTLCQHLR 358
Query: 356 IGLAEQTLLAALGQAAVYN-------------EQHSKPPPNIQSPLEEAAKIVKQVFSVL 402
IG + T+L AL +A + + E + ++ +A + VK F+
Sbjct: 359 IGAVKTTMLIALSRAFLLSRPTNAEFSLRSQAELSALKKDSLAEVWSKAEETVKACFAKR 418
Query: 403 PVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
P Y +VPALL GV + L C +P+ PML T+ +SE++ K Q +F+CE+KY
Sbjct: 419 PNYSDLVPALLEIGVCDELPIRCGLGLHVPLMPMLGNITRDLSEMLTKLQGRDFSCEFKY 478
Query: 462 DGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK 521
DG+RAQ+H +G V I+SR+ E T K+PD+V + +++ SV SF+L+ E+VA DR+
Sbjct: 479 DGQRAQVHCDANGKVSIFSRHLELMTDKYPDLVALIPKIRGDSVNSFILEGEVVAVDRDT 538
Query: 522 QKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEE 581
+ FQTL+ RARK+V++ I +DVC++AFD++Y NG+PLL R RR L F E
Sbjct: 539 GDLKTFQTLTNRARKDVAIGSITIDVCLFAFDLMYLNGEPLLDRPFRERRSLLRSLFVEL 598
Query: 582 PGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMD------------------- 620
P F + + TS D + I +F +A DA CEG+++K +D
Sbjct: 599 PRHFTWVQNMDATSQDSETILEFFKSATDAKCEGIMVKILDNLPDPSLDVKPEDEETVAD 658
Query: 621 -----------------RDATYEPSK------------------RSLNWLKLKKDYIESI 645
++ EP K R +WLK+KKDY +
Sbjct: 659 ADELQASAVISRKGKQKKNREKEPEKEKRAGRRKALLSTYEPDKRLDSWLKVKKDYSATF 718
Query: 646 GDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML-------- 697
DSLDL+PIA +HG+G+++ + LLA + +++CK +GF++
Sbjct: 719 -DSLDLIPIAGWHGQGRKSKFWSPILLAVRNETTGSLEAVCKCISGFTDNFYKANKEFYD 777
Query: 698 EERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI--VYDSQITCL 752
E+ + L SK P Y PDVWFEP E E + + +I VY + I L
Sbjct: 778 EDGPNVLDSK------PSYIDYTGGYPDVWFEPKEVWEMAFADITISPVYTAAIGLL 828
>gi|389644810|ref|XP_003720037.1| DNA ligase 1 [Magnaporthe oryzae 70-15]
gi|351639806|gb|EHA47670.1| DNA ligase 1 [Magnaporthe oryzae 70-15]
gi|440470604|gb|ELQ39666.1| DNA ligase 1 [Magnaporthe oryzae Y34]
gi|440479018|gb|ELQ59810.1| DNA ligase 1 [Magnaporthe oryzae P131]
Length = 859
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 233/687 (33%), Positives = 347/687 (50%), Gaps = 87/687 (12%)
Query: 128 DNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVL----LKKKAGEFDPKMVA 183
DNP+ T S K + + SV++ E + S I L L E+ K+ A
Sbjct: 101 DNPLADGSALTVTANSTKTNTLTLQSVASAEDT--ISSVIPLDESPLAFNVSEYITKLKA 158
Query: 184 CWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKI 242
W +G + L+ F ++S T RI I D + N LR ++E P+ L+P V+LA N I
Sbjct: 159 HWNAEGGNASYAILTRCFVLVSATTSRIKIVDTLVNCLRILIEADPDSLLPAVWLATNSI 218
Query: 243 APAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPD 301
+P + LELG+G ++I KAL + CG +K Y + GD G VA ++ Q+ +RKP
Sbjct: 219 SPPYISLELGLGGSAISKALKQVCGLDSRSLKAIYDKHGDPGDVAFEAKKKQNFTLRKPK 278
Query: 302 PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAE 360
PLTI VF + IA+ G+ S K+ + LL A E ++++R L LRIG +
Sbjct: 279 PLTIKGVFQSLVKIAQSQGQGSVNVKQQIVDRLLQDARGGEESRFIVRTLCQHLRIGAVK 338
Query: 361 QTLLAALGQA--------AVYNEQHSKPPPNIQSPLEEAAKI-------VKQVFSVLPVY 405
T+L AL +A A + + +K ++ EE A++ VK F+ P Y
Sbjct: 339 TTMLIALSRAFLLSKPYGADFETRDTKELARLKK--EELAEVWARGEELVKACFARRPNY 396
Query: 406 EKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
+VP LL G+ + L C IP+ PML T+ +SE++ K Q +F CE+KYDG+
Sbjct: 397 NDLVPVLLEIGITDELLVRCGLAIHIPLRPMLGSITRDLSEMLTKLQGRDFACEFKYDGQ 456
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQ+H E+G V I+SR+ E T K+PD+V + +++ V SF+L+ E+VA D +
Sbjct: 457 RAQVHCDENGKVSIFSRHLELMTDKYPDLVALIPKIRGEGVSSFILEGEVVAVDSTTGDL 516
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
FQTL+ RARK+V + I V+VC++AFD++ NGQPLL R RRE L F E P
Sbjct: 517 KNFQTLTNRARKDVEIGSITVNVCLFAFDLMLLNGQPLLNRPFRERRELLKSLFIEVPHN 576
Query: 585 FQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDR--------DAT---------- 624
F + ++ TS D + + +F AA D CEGL++K +D D T
Sbjct: 577 FTWVKSIDATSQDSEAVLEFFKAATDQKCEGLMVKILDNLPDIAYKGDGTTEPVDEQEKI 636
Query: 625 --------------------------------YEPSKRSLNWLKLKKDYIESIGDSLDLV 652
YEP KR +WLK+KKDY +S D+LDL+
Sbjct: 637 SKTTTAKAKGKTKTRADNAEPKRTRRKPLLATYEPDKRLDSWLKVKKDY-DSTFDTLDLI 695
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRS------ 706
PIAA+HG+G++ + LLA + +++ K +GF++A +E +
Sbjct: 696 PIAAWHGQGRKAKWWSPILLAVRNEATGSLEAVTKCMSGFTDAFYKENRAFYNDGEEDGE 755
Query: 707 -KVIPKPRPYYRFADTISPDVWFEPTE 732
+ RP + PDVWFEP E
Sbjct: 756 RQNTRARRPAFVEYSGPEPDVWFEPQE 782
>gi|326430673|gb|EGD76243.1| hypothetical protein PTSG_11661 [Salpingoeca sp. ATCC 50818]
Length = 1437
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 216/604 (35%), Positives = 324/604 (53%), Gaps = 67/604 (11%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETT--------PEDLVPVVYLAAN 240
E ++ ++ F+ + R+ IT+++ ML TV+ TT E L+ VYL+ N
Sbjct: 730 EDCEYLVIASTFEEMLKTKSRLKITELLKTMLCTVLTTTEKPDGTPDTEALIATVYLSTN 789
Query: 241 KIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
IAP++ +ELGIG+ + A+ A GR+ ++ Y+E+GDLG VA +RSS + +P
Sbjct: 790 SIAPSYRNVELGIGERLVAAAVRTATGRSRQQMRSDYKELGDLGDVAFKARSSVRTLFRP 849
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
PL I +F IA G S ++K+ + LLV+ E ++L+R L S LRIG
Sbjct: 850 RPLQIKALFRDLHRIAVMKGPGSVKQKQALVHKLLVSCRGPEIRFLVRTLISNLRIGAVG 909
Query: 361 QTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN- 419
TL A+G A + + P +EAA+ VK ++ P +E I+ ALL+ G ++
Sbjct: 910 LTLQVAVGHAIREYRRQTHIAP------DEAAQRVKDAYARHPCWETILTALLSPGCFDE 963
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY------LED 473
L+ PG+P+ PML K T+ +++ + + + F E+KYDG RAQIH
Sbjct: 964 LAARTQAHPGVPVRPMLGKITRDLADALERLRGKNFQAEFKYDGVRAQIHIDAPTRQRSA 1023
Query: 474 GSVEIYSRNAERNTGKFPDVV------LAVSRLKKP-SVRSFVLDCEIVAYDREKQKILP 526
++ ++SR+ E T ++PD + LAV ++ S VLD EIVA E +LP
Sbjct: 1024 ATLHMFSRHLENMTDRYPDALESVLDALAVDGDSNALAISSCVLDAEIVAV-TEDGTMLP 1082
Query: 527 FQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
FQTL RARKNV S + + V ++ FDI++ NG LL+ R+RR+ L D+F P Q
Sbjct: 1083 FQTLMNRARKNVDGSSVSIRVRVHLFDIMHHNGASLLKHPFRLRRKLLQDTFTMLPNRLQ 1142
Query: 587 FATTLT-------SIDLDEIQKFLDAAVDASCEGLIIKTM-------------------- 619
T T S +++FL AA+DA CEGL+IK +
Sbjct: 1143 LVTAKTFQCKPDGSHSPQPLREFLHAALDAKCEGLMIKVLGPEMIPAADDTTTSHGKKTV 1202
Query: 620 -----DRD-----ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
D D +TY+PSKR NWLK+KKDY+E + DSLDLV I A+ G G++ G +
Sbjct: 1203 KNQGSDSDDLYALSTYQPSKRCENWLKVKKDYVEGLSDSLDLVVIGAWWGNGRKAGWFSP 1262
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSK-VIPKPRPYYRFADTISPDVWF 728
FLLACYD E +QS+CK+ +GF++ + ++ + K VI R YY + +SP VWF
Sbjct: 1263 FLLACYDEETETYQSVCKVMSGFTDEFYKTTTALFKEKHVIDAKRSYYDVSAQMSPSVWF 1322
Query: 729 EPTE 732
+ E
Sbjct: 1323 DSVE 1326
>gi|310791967|gb|EFQ27494.1| DNA ligase I [Glomerella graminicola M1.001]
Length = 869
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 227/677 (33%), Positives = 349/677 (51%), Gaps = 91/677 (13%)
Query: 141 PPSPKKRKVNVNSVS-AKEKIAELKSNIVLLKKKAGEFDP-----KMVACWE-KGERVPF 193
P +PKK ++++SV+ A++ IA + L + FDP ++ W +G +
Sbjct: 121 PEAPKKNTLSLSSVAKAEDAIA----TTIPLDQSPLTFDPSEFVSQLKTHWAAEGGHASY 176
Query: 194 IFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGI 253
FL+ F +++ RI I D + N +R ++E PE L+P V+LA N I+P + LELG+
Sbjct: 177 AFLTRCFILVNATQSRIKIVDTLVNCIRVLIEADPESLLPAVWLATNAISPPYISLELGL 236
Query: 254 GDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTF 312
G ++I KAL + CG +K Y + GD G VA + QS +RKP PLTI V+ +
Sbjct: 237 GGSAISKALKQVCGLDSRALKTIYDKYGDAGDVAFEVKKKQSFTLRKPKPLTIKAVYQSL 296
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAA 371
IA G+ S E K+ + LL A E +Y++R L LRIG + T+L AL +A
Sbjct: 297 VKIANTQGQGSGEAKQRIVDRLLQDARGGEESRYIVRTLCQHLRIGAVKTTMLIALSRAF 356
Query: 372 VYNE-QHSKPPPNIQSPLEEAAK------------IVKQVFSVLPVYEKIVPALLTDGVW 418
+ + Q + P L++ K IVK F+ P Y +VP +L GV
Sbjct: 357 LLSRPQGADFPLRSTKDLQKLKKEELAEVWSRPEEIVKACFARRPNYNDLVPIMLEIGVC 416
Query: 419 N-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE 477
+ L C T IP+ PML T+ +SE++ K Q +F CE+KYDG+RAQIH E G V
Sbjct: 417 DELLLRCGLTLHIPLRPMLGSITRDLSEMLTKLQGRDFACEFKYDGQRAQIHCDEKGKVT 476
Query: 478 IYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
I+SR+ E T K+PD+V + +++ V SF+++ E+VA D ++ FQTLS RARK+
Sbjct: 477 IFSRHLELMTDKYPDLVALMPKIRGQGVDSFIMEGEVVAVDSGTGELKNFQTLSNRARKD 536
Query: 538 VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSID 595
V++ ++V+VC++AFD+++ NGQPLL R RRE L F E P F + +L TS D
Sbjct: 537 VAIGSVQVNVCMFAFDLMFLNGQPLLDRPFRERRELLRSMFIEVPRQFTWVKSLDATSQD 596
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDR----------------DATYEP------------ 627
D + +F AA D CEG+++K +D + EP
Sbjct: 597 FDAVLEFFKAATDIKCEGIMVKILDNLTNIPYQGDEALGVGGEVAEEPRTPSKSKSRGRS 656
Query: 628 -----------------------SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
KR +WLK+KKDY S D+LD++P+AA+HG+G+++
Sbjct: 657 SKDEEVGTKKNGRRKPLLATYEPDKRLDSWLKVKKDYNASF-DTLDMIPVAAWHGQGRKS 715
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---------ERSSSLRSKVIPKPRPY 715
+ L+A + + + +CK +GF++A + E + R + +
Sbjct: 716 KWWSPILMAVRNEHTASLEVVCKCMSGFADAFYKANREFYDDGELNGGDRINTRTQKPAF 775
Query: 716 YRFADTISPDVWFEPTE 732
++ PDVWFEP E
Sbjct: 776 VEYSGP-EPDVWFEPQE 791
>gi|145232901|ref|XP_001399823.1| DNA ligase 3 [Aspergillus niger CBS 513.88]
gi|134056744|emb|CAK44233.1| unnamed protein product [Aspergillus niger]
gi|350634660|gb|EHA23022.1| Hypothetical protein ASPNIDRAFT_52284 [Aspergillus niger ATCC 1015]
Length = 834
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 214/626 (34%), Positives = 325/626 (51%), Gaps = 71/626 (11%)
Query: 174 AGEFDPKMVACW-EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV 232
A ++ ++ W +G + L+ F + + T RI I D + N LR ++E P ++
Sbjct: 135 ASKYAHELQGHWASEGGDASYALLTRAFVLANATTSRIKIVDTLVNFLRVLIEADPSSVL 194
Query: 233 PVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRS 292
P V+LA N I+P ++ LELG+G +SI KAL + G +K Y + GD G VA ++
Sbjct: 195 PAVWLATNSISPPYDELELGLGGSSISKALKKVYGLNSQGLKTLYDKHGDAGDVAFEAKK 254
Query: 293 SQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLL 350
QS + KP PL I V+ + + IA G SQE K+ ++ LL A E +Y++R L
Sbjct: 255 RQSFTLMKPKPLRIKGVYQSLKKIAMSKGSGSQETKQRIVEKLLQDARGAEESRYIVRTL 314
Query: 351 QSKLRIGLAEQTLLAALGQAAVYN-------------EQHSKPPPNIQSPLEEAAKIVKQ 397
LRIG + T+L AL +A +Y+ E + A +IVK
Sbjct: 315 VQNLRIGAVKTTMLIALARAFLYSKPEGAGFSIYSQREMAQMKKEELAEIYGNAEEIVKA 374
Query: 398 VFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFT 456
++ P Y+ +VP LL G + L C IP+ PML T+ +S+++ K Q +F+
Sbjct: 375 SYARHPDYDDLVPCLLEVGATDELLVRCGLQIHIPLRPMLGSITRDLSDMLTKLQGRDFS 434
Query: 457 CEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVA 516
CEYKYDG+RAQ+H G V I+SR+ E T K+PD+V V ++ V SF+L+ E+VA
Sbjct: 435 CEYKYDGQRAQVHCDVQGKVSIFSRHLENMTEKYPDLVSLVPEIRGEGVSSFILEGEVVA 494
Query: 517 YDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYD 576
D+E ++ FQ L+ RA+KNV + IKV+VC++AFD++Y NGQPLL R RRE L
Sbjct: 495 VDQETGELQAFQILTNRAKKNVDIGAIKVNVCLFAFDLMYLNGQPLLDRSFRERRELLRS 554
Query: 577 SFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMD-------------- 620
F E P F + +L TS D + + +F +A D CEG+++K +D
Sbjct: 555 LFVEIPKRFTWVKSLDATSADSEAVLEFFKSATDTKCEGIMVKVLDNMPKPDLEGIDTPA 614
Query: 621 ----------------------------RDA---TYEPSKRSLNWLKLKKDYIESIGDSL 649
R A TYEP KR +WLK+KKDY S ++L
Sbjct: 615 VDTSNGTPTTPGQPTTNMTDNKPSKNTRRKALLSTYEPDKRLESWLKVKKDYSTS-SETL 673
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRS 706
DL+PIA +HG+G++ + LLA + +++ K +GF++ + ++ +
Sbjct: 674 DLIPIAGWHGQGRKAKWWSPILLAVRNPETGSLEAVTKCMSGFTDKFYQANKDKYAEGTP 733
Query: 707 KVIPKPRPYYRFADTISPDVWFEPTE 732
VI +P + + PDVWFEP E
Sbjct: 734 NVISRPSYVEYYGE---PDVWFEPQE 756
>gi|336384240|gb|EGO25388.1| hypothetical protein SERLADRAFT_348456 [Serpula lacrymans var.
lacrymans S7.9]
Length = 799
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 212/621 (34%), Positives = 314/621 (50%), Gaps = 78/621 (12%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W P+ F++ +S RI+I + + N LRT++ P L+P +YL +N ++P
Sbjct: 91 WPANTAAPYAFIAHTLVTLSETRSRIVIINTLTNCLRTLLRYNPSSLLPALYLLSNTLSP 150
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ +ELGIG + I KA+ G T + +K+ Y GD G VA ++S+ + PL
Sbjct: 151 PYSPIELGIGSSVISKAIQHVSGLTPAALKRLYNASGDPGDVAFEAKSNLRTLVPHPPLC 210
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
IT V+D+ IA G+ + ++K+ ++ LLVAA E ++L+R L LR+G ++L
Sbjct: 211 ITAVYDSLIKIANVKGQGANKQKQTIVEKLLVAAKGEEVRFLVRTLSMNLRVGAVRTSIL 270
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLE----------------------------------- 389
AL +A V PP N+ +PL
Sbjct: 271 TALSRAMVLT-----PPSNMSTPLSIDSSYYTNPNLLAAVKPLSTDSKRKVADESRDRVL 325
Query: 390 ----EAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSE 445
A +VK+VF P Y+ IV L G+ L+ T GIP+ P L PT+ + E
Sbjct: 326 AKFSLAESLVKKVFVQHPNYDHIVAGLFEGGLDGLAERVPLTIGIPLHPTLGSPTRSLDE 385
Query: 446 IVNKFQDMEFTCEYKYDGERAQIHYLEDGS----VEIYSRNAERNTGKFPDVVLAVSRL- 500
I ++ D+ FT E+KYDG+RAQIH +D V I+SR+ E T K+PD+V V +
Sbjct: 386 IYDRLGDLSFTAEFKYDGQRAQIHGSKDKDGQVFVRIFSRHLEDMTSKYPDIVSLVKCVF 445
Query: 501 -KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNG 559
P ++ F++D EIVA D + FQ LS RARK+V++ D+KV VC++AFD++ NG
Sbjct: 446 ASSPDLQCFIMDAEIVAIDPAHGSLKSFQELSNRARKDVNIQDVKVAVCVFAFDLMLLNG 505
Query: 560 QPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID-------LDEIQKFLDAAVDASCE 612
+ LL+ R RR L +F + Q A L +D ++ F AV++ CE
Sbjct: 506 EILLERPFRERRSLLRVNFPPQIPKEQGAARLDQVDSFDSEEGRGHVEDFWMKAVESRCE 565
Query: 613 GLIIKTMDRD-------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
GL+IK +D ATYEP KR+ WLKLKKDY+ SIGDSLDLVP
Sbjct: 566 GLMIKLLDSGEVPEEFSLQKDKVKKKPLPATYEPDKRTSAWLKLKKDYVLSIGDSLDLVP 625
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL--RSKVIPK 711
I A+HG G++ G + LLA +S + ++CK +GFS+ E S S +
Sbjct: 626 IGAWHGNGRKAGWWSPILLAVRESTTGDLVAVCKCMSGFSDVFYREMKSRFPEDSDTCSR 685
Query: 712 PRPYYRFADTISPDVWFEPTE 732
+ PDV+F+P E
Sbjct: 686 LPQWECITGGFDPDVYFKPRE 706
>gi|159127519|gb|EDP52634.1| DNA ligase I, putative [Aspergillus fumigatus A1163]
Length = 833
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 209/609 (34%), Positives = 320/609 (52%), Gaps = 71/609 (11%)
Query: 187 KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAH 246
+G + L+ F + + T RI I D + N LR ++E P ++P V+LA N I+P +
Sbjct: 150 EGGNASYALLTRAFVLANATTSRIRIVDTLVNFLRVLIEGDPSSVLPAVWLATNSISPPY 209
Query: 247 EGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTI 305
+ LELG+G ++I KAL + G +K Y + GD G VA ++ QS + KP PLTI
Sbjct: 210 DELELGLGGSAISKALKKVYGLNPYGLKNLYDKYGDAGDVAFEAKKRQSFTLMKPKPLTI 269
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLL 364
V+ + R IA G SQE K+ ++ LL E +Y++R L LRIG + T+L
Sbjct: 270 KGVYQSLRKIATSKGSGSQESKQRIVEKLLQDTRGAEESRYIVRTLVQNLRIGAVKTTML 329
Query: 365 AALGQAAVYNEQHSKPP-----------------PNIQSPLEEAAKIVKQVFSVLPVYEK 407
AL +A +Y SKP + A +IVK ++ P Y
Sbjct: 330 IALARAFLY----SKPEGAEFTIRSRQDLTRLKKEELAEIYSRAEEIVKASYARHPNYND 385
Query: 408 IVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
+V LL GV L C +P+ PML T+ +SE++ K Q +F+CEYKYDG+RA
Sbjct: 386 LVTCLLESGVTEELLLRCGLQLHVPLRPMLGSITRDLSEMLTKLQGRDFSCEYKYDGQRA 445
Query: 467 QIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP 526
Q+H E G V I+SR+ E T K+PD+V VS+++ SV SF+L+ E+VA D + ++
Sbjct: 446 QVHCDEKGKVSIFSRHLENMTEKYPDLVSLVSQIRGESVSSFILEGEVVAVDNKTGELQT 505
Query: 527 FQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
FQ L+ RA+KNV + I ++VC++AFD++Y NG+PLL R RRE L F E P F
Sbjct: 506 FQVLTNRAKKNVEIGAININVCLFAFDLMYLNGEPLLDRPFRERRELLRSLFVEIPNRFT 565
Query: 587 FATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD---------------------- 622
+ +L TS D + + +F +A++ CEG+++K +D
Sbjct: 566 WVKSLDATSADSETVLEFFKSALENKCEGIMVKVLDNAPKTSLEQNKEASTSNGMDVTSG 625
Query: 623 ----------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
+TYEP KR +WLK+KKDY S ++LDL+PIA +HG+G++
Sbjct: 626 EPLEKAGKGGRRKALLSTYEPDKRLESWLKVKKDYSTS-SETLDLIPIAGWHGQGRKAKW 684
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTIS 723
+ L+A + +++ K +GF++ + ++ + VI +P + +
Sbjct: 685 WSPILMAVRNPETGSLEAVTKCMSGFTDKFYQANKDKYAEGTPNVISRPAYVEYYGE--- 741
Query: 724 PDVWFEPTE 732
PDVWFEP E
Sbjct: 742 PDVWFEPQE 750
>gi|322697489|gb|EFY89268.1| DNA ligase I, putative [Metarhizium acridum CQMa 102]
Length = 871
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 217/631 (34%), Positives = 325/631 (51%), Gaps = 91/631 (14%)
Query: 187 KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAH 246
+G + L+ F ++S T RI I D + N LR ++E P L+P V+LA N I+PA+
Sbjct: 163 EGGNASYALLTRCFVLVSGTTSRIKIVDTLVNCLRLLVEGDPSSLLPAVWLATNSISPAY 222
Query: 247 EGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTI 305
LELG+G ++I KAL + CG +K Y + GD G VA ++ QS +RKP PLTI
Sbjct: 223 ISLELGLGGSAISKALKQVCGLDNRSLKAIYDKYGDAGDVAFEAKKKQSFTLRKPKPLTI 282
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLL 364
V+ IA G+ S + K+ + LL A E ++++R L LRIG + T+L
Sbjct: 283 KGVYQDLVKIASSQGQGSAQAKQRIVDRLLQDARGGEESRFIVRTLCQHLRIGAVKTTML 342
Query: 365 AALGQAAVYNEQHSKPPPNIQSPL----------EEAAKI-------VKQVFSVLPVYEK 407
AL +A + S+PP SPL E+ A+I VK F+ P Y
Sbjct: 343 IALSRAFLL----SRPPGAHYSPLSIPALSKLRKEDLAEIWGKAEETVKACFARRPNYND 398
Query: 408 IVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
++P LL G+ + L C IP+ PML T+ +SE++ K Q +F CEYKYDG+RA
Sbjct: 399 LIPVLLEIGISDELLIRCGLALHIPLRPMLGSITRDLSEMLTKLQGRDFACEYKYDGQRA 458
Query: 467 QIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP 526
Q+H + G V I+SR+ E T K+PD+V V R++ V SF+++ E+VA DRE ++
Sbjct: 459 QVHCDDGGKVSIFSRHLELMTDKYPDLVELVPRIRGEGVSSFIMEGEVVAVDRETGELKN 518
Query: 527 FQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
FQTL+ RARK+V + IK+DVC++AFD+++ NGQPLL R RRE L F E P F
Sbjct: 519 FQTLTNRARKDVQIGSIKIDVCLFAFDLMFLNGQPLLDRPFRERRELLRSLFTEVPHNFT 578
Query: 587 FATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDR----------------------- 621
+ +L TS D + + F +A ++ CEG+++K +D
Sbjct: 579 WVKSLDATSSDSETVLDFFKSATESKCEGIMVKILDNLVDIPYLGDEEEPAAEETERVPT 638
Query: 622 --------------DATYEPSKRSL------------------NWLKLKKDYIESIGDSL 649
AT E K++ +WLK+KKDY S D+L
Sbjct: 639 PKPKSKAKKKGNGATATGEGDKKTTGSRRKPLLATYEPDKRLDSWLKVKKDYNSSF-DTL 697
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML--------EERS 701
DL+PIA +HG+G++ + LLA + +++CK +GF++ +
Sbjct: 698 DLIPIAGWHGQGRKAKWWSPVLLAVRNEETGMLEAVCKCMSGFTDTFYKAMRQFYDDGED 757
Query: 702 SSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
S R + + +++ + PDVWFEP E
Sbjct: 758 SGERKNTRSQMPSFIQYSGPM-PDVWFEPQE 787
>gi|156042484|ref|XP_001587799.1| hypothetical protein SS1G_11039 [Sclerotinia sclerotiorum 1980]
gi|154695426|gb|EDN95164.1| hypothetical protein SS1G_11039 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 820
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 221/641 (34%), Positives = 336/641 (52%), Gaps = 83/641 (12%)
Query: 201 DMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIK 260
D IS ++ RI I D + N+LR ++E P+ L+ V+LA N I+P + LELG+G ++I K
Sbjct: 142 DTISTQS-RIKIVDTLVNLLRVIIEGDPDSLLHTVWLATNAISPPYISLELGLGGSAISK 200
Query: 261 ALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEA 319
AL CG +K Y + GD G VA ++ QS +RKP PLTI V+ + IAK
Sbjct: 201 ALKNVCGLDSRSLKTLYNKHGDAGDVAFEAKKRQSFTLRKPKPLTIKGVYQSLVKIAKTQ 260
Query: 320 GKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHS 378
G S E K+ + LL A E +Y++R L LRIG + T+L AL +A Q S
Sbjct: 261 GTGSSEIKQRIVDRLLQDARGAEESRYIVRTLCQHLRIGAVKTTMLIALSRAF----QLS 316
Query: 379 KPPPNIQSPLE------------------EAAKIVKQVFSVLPVYEKIVPALLTDGVWN- 419
+PP PL+ + +IVK F+ P Y ++P LL GV
Sbjct: 317 RPP-GADFPLKSQQELVKLKKEVLAELWSKGEEIVKACFAKRPNYNDLIPILLEIGVCEE 375
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
L C IP+ PML T+ ++E++ K Q +F+CEYKYDG+RAQ+H E+G V I+
Sbjct: 376 LLVRCGLALHIPLRPMLGSITRDLAEMLTKLQGRDFSCEYKYDGQRAQVHCDENGKVSIF 435
Query: 480 SRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVS 539
SR+ E T K+PD+V + +++ V SF+++ E+V+ DR+ + FQ+L+ RARK+V+
Sbjct: 436 SRHLELMTDKYPDLVALIPKIRGEGVESFIMEGEVVSVDRQSGDLKTFQSLANRARKDVA 495
Query: 540 LSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLD 597
+ + +DVC+++FD++Y NG+ LL R RRE L F E P F + ++ TS D +
Sbjct: 496 IGSVTIDVCLFSFDLMYLNGESLLNRTFRERRELLRGLFVEVPNQFTWVKSIDATSQDSE 555
Query: 598 EIQKFLDAAVDASCEGLIIKTMD------------------------------------- 620
+ +F + A++ CEG+++K +D
Sbjct: 556 VVLEFFNTAIERKCEGIMVKILDDLPSTTLLESEEVSEEIEPSILQTSQKQSRGKTKSAE 615
Query: 621 --------RDA---TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
R A TYEP KR +WLK+KKDY S D+LDL+P+AA+HG+G++ +
Sbjct: 616 KEPEKKTRRKALLSTYEPDKRLDSWLKVKKDYSASF-DTLDLIPVAAWHGQGRKAKFWSP 674
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAM--LEERSSSLRSKVIPKPRPYYRFADTISPDVW 727
LLA + +++CK +GFS+A + + + + + +P Y PDVW
Sbjct: 675 ILLAVRNDETGTLEAVCKCISGFSDAFYKVNKEFYAEGGEHVLGGKPNYVDYRGGHPDVW 734
Query: 728 FEPTERPETSNSPASI--VYDSQITCLPSSYMPFSRSYFRF 766
FEP E E + + +I VY + I L S S + RF
Sbjct: 735 FEPQEVWEMAYADITISPVYRAAIG-LVSDEKGLSLRFPRF 774
>gi|440799909|gb|ELR20952.1| ATPdependent DNA ligase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 627
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 200/507 (39%), Positives = 286/507 (56%), Gaps = 55/507 (10%)
Query: 278 QEMGDLGLVAKASRSSQSMM--RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALL 335
+E GD+GLV + ++ Q + R LT + T + G +S ++K++ IK LL
Sbjct: 2 KETGDVGLVGELAKGRQKTIWTRAASSLTCGALHKTLLTVTTLKGNESTKRKRDTIKQLL 61
Query: 336 VAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQS-----PLEE 390
V+ E +Y+IR+LQ LRIG+ E+TL AL A ++ S S +
Sbjct: 62 VSCQKEEARYIIRILQGNLRIGVLEKTLYVALAHALFIEKRSSSNSTQTASWPSKEEFKS 121
Query: 391 AAKIVKQVFSVLPVYEKIVPALL-TDGVWNLSN-----------------TCSF------ 426
AK+V + F+ +P Y+ I+P LL + + +LS+ +F
Sbjct: 122 VAKLVTRAFNEMPCYDSIIPLLLEKENLLDLSHEHLLIPGNPPPPPRPPEAAAFMATLPS 181
Query: 427 --------TPGIPIGPMLAKPTKGVSEIVNKF-QDMEFTCEYKYDGERAQIHYLEDGSVE 477
+PG P+ PML+ P+ G +IV +F ++F CEYKYDGERAQIH + D
Sbjct: 182 SNAYATFCSPGTPVKPMLSSPSSGPEDIVARFGAGVQFLCEYKYDGERAQIHKVGDNKYA 241
Query: 478 IYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL---------DCEIVAYDREKQKILPFQ 528
+YSR E +T KFPD++ + + +K + +S+++ D EIVAYDRE +KILPFQ
Sbjct: 242 VYSRRLEDHTSKFPDLIACLPQYEKETTQSYIIGQYLLLLCQDGEIVAYDRESKKILPFQ 301
Query: 529 TLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFA 588
TL+TRARKNV L IKV VC YAFDILY N + L+ L RR+ L F G FQ A
Sbjct: 302 TLTTRARKNVDLDAIKVQVCFYAFDILYINKEVLVNLPLVERRKRLESEFVPVDGGFQMA 361
Query: 589 TTLTSIDLDEIQKFLDAAVD-ASCEGLIIKTM-DRDATYEPSKRSLNWLKLKKDYIESIG 646
T+ + +E+ D+++ A EGL++K + ATYE KRSL WLKLK+DY+E
Sbjct: 362 TSQLAATAEELSAHFDSSLQQAHIEGLVVKLWTEATATYELGKRSLKWLKLKRDYLEGCA 421
Query: 647 DSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR- 705
D+LDLV + F+GRGKR GV+G++LL +D NEE+Q+ CK TGFS+ L + L
Sbjct: 422 DTLDLVVMGGFYGRGKRAGVFGSYLLGVWDPENEEYQATCKCMTGFSDEFLLATAKYLNE 481
Query: 706 -SKVIPKPRPYYRFADTISPDVWFEPT 731
++ KP YYR+ PDVWF+PT
Sbjct: 482 GDNLLAKPLSYYRYG--AEPDVWFKPT 506
>gi|70999574|ref|XP_754505.1| DNA ligase I [Aspergillus fumigatus Af293]
gi|66852142|gb|EAL92467.1| DNA ligase I, putative [Aspergillus fumigatus Af293]
Length = 833
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 221/669 (33%), Positives = 338/669 (50%), Gaps = 80/669 (11%)
Query: 133 SEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVAC-----WE- 186
+E +S P PK +++ S E L + + FD A W
Sbjct: 93 TESDSGPPKKVPKTNTISLQSSVGTEDTISLS---IPFDQSPLTFDSTKCAAELQVHWAT 149
Query: 187 KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAH 246
+G + L+ F + + T RI I D + N LR ++E P ++P V+LA N I+P +
Sbjct: 150 EGGNASYALLTRAFVLANATTSRIRIVDTLVNFLRVLIEGDPSSVLPAVWLATNSISPPY 209
Query: 247 EGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTI 305
+ LELG+G ++I KAL + G +K Y + GD G VA ++ QS + KP PLTI
Sbjct: 210 DELELGLGGSAISKALKKVYGLNPYGLKSLYDKYGDAGDVAFEAKKRQSFTLMKPKPLTI 269
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLL 364
V+ + R IA G SQE K+ ++ LL E +Y++R L LRIG + T+L
Sbjct: 270 KGVYQSLRKIATSKGSGSQESKQRIVEKLLQDTRGAEESRYIVRTLVQNLRIGAVKTTML 329
Query: 365 AALGQAAVYNEQHSKPP-----------------PNIQSPLEEAAKIVKQVFSVLPVYEK 407
AL +A +Y SKP + A +IVK ++ P Y
Sbjct: 330 IALARAFLY----SKPEGAEFTIRSRQDLTRLKKEELAEIYSRAEEIVKASYARHPNYND 385
Query: 408 IVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
+V LL GV L C +P+ PML T+ +SE++ K Q +F+CEYKYDG+RA
Sbjct: 386 LVTCLLESGVTEELLLRCGLQLHVPLRPMLGSITRDLSEMLTKLQGRDFSCEYKYDGQRA 445
Query: 467 QIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP 526
Q+H E G V I+SR+ E T K+PD+V VS+++ SV SF+L+ E+VA D + +
Sbjct: 446 QVHCDEKGKVSIFSRHLENMTEKYPDLVSLVSQIRGESVSSFILEGEVVAVDNKTGGLQT 505
Query: 527 FQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
FQ L+ RA+KNV + I ++VC++AFD++Y NG+PLL R RRE L F E P F
Sbjct: 506 FQVLTNRAKKNVEIGAININVCLFAFDLMYLNGEPLLDRPFRERRELLRSLFVEIPNRFT 565
Query: 587 FATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD---------------------- 622
+ +L TS D + + +F +A++ CEG+++K +D
Sbjct: 566 WVKSLDATSADSETVLEFFKSALENKCEGIMVKVLDNAPKTSLEQNKEASTSNGMDVTSG 625
Query: 623 ----------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
+TYEP KR +WLK+KKDY S ++LDL+PIA +HG+G++
Sbjct: 626 EPLENAGKGGRRKALLSTYEPDKRLESWLKVKKDYSTS-SETLDLIPIAGWHGQGRKAKW 684
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTIS 723
+ L+A + +++ K +GF++ + ++ + VI +P + +
Sbjct: 685 WSPILMAVRNPETGSLEAVTKCMSGFTDKFYQANKDKYAEGTPNVISRPAYVEYYGE--- 741
Query: 724 PDVWFEPTE 732
PDVWFEP E
Sbjct: 742 PDVWFEPQE 750
>gi|406861989|gb|EKD15041.1| DNA ligase I [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 897
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 217/649 (33%), Positives = 334/649 (51%), Gaps = 84/649 (12%)
Query: 177 FDP-----KMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPED 230
FDP ++ W +G + L+ F ++++ RI I D + N+LR ++E P
Sbjct: 178 FDPSKYVAELQGHWAAEGGDASYALLTRCFVLVNSTQSRIRIVDTLVNLLRVIIEGDPSS 237
Query: 231 LVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKAS 290
L+P V+L+ N I+P + LELG+G ++I KAL CG +K Y ++GD G VA +
Sbjct: 238 LLPTVWLSTNAISPPYISLELGLGGSAISKALKNVCGLDSRSLKALYDKVGDAGDVAFEA 297
Query: 291 RSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIR 348
+ QS +RKP PLTI V+ + IAK G S E K+ + LL A E +Y++R
Sbjct: 298 KKRQSFTLRKPKPLTIKGVYQSLVKIAKTQGTGSGEIKQRVVDRLLQDARGAEESRYVVR 357
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLE--------------EAAKI 394
L LRIG + T+L AL +A + + P ++SP E A +I
Sbjct: 358 TLCQHLRIGAVKTTMLIALSRALLLSRPSGADFP-LKSPAELARLKKEELAVVWSNAEEI 416
Query: 395 VKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDM 453
VK F+ P Y ++P LL GV L C IP+ PML T+ +SE++ K Q
Sbjct: 417 VKACFARRPNYNDLIPVLLEIGVCEELLIRCGLALHIPLRPMLGSITRDLSEMLTKLQGR 476
Query: 454 EFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCE 513
+F+CEYKYDG+RAQ+H + G V I+SR+ E T K+PD+V + ++ V SF+++ E
Sbjct: 477 DFSCEYKYDGQRAQVHCDDQGRVSIFSRHLELMTDKYPDLVALIPEIRGEDVSSFIMEGE 536
Query: 514 IVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREH 573
+VA D E + FQTL+ RARK+V++ ++V+VC+++FD++Y NG+ LL R RRE
Sbjct: 537 VVAVDPESGDLKTFQTLANRARKDVAIGSVRVNVCLFSFDLMYLNGESLLDRPFRERREL 596
Query: 574 LYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDR--DATY-EPS 628
L F E P F + ++ TS D + + +F +A D CEG+++K +D DA EPS
Sbjct: 597 LRGLFTEIPNQFTWVRSIDATSQDSEAVLEFFKSATDVKCEGIMVKILDNLPDANIPEPS 656
Query: 629 ---------------------------------------------------KRSLNWLKL 637
KR +WLK+
Sbjct: 657 SLTAVPVPVPVPVPEEAAPKPVRGKKNAAASEEKAEKKTRRKALLATYEPDKRLDSWLKV 716
Query: 638 KKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
KKDY + D+LDL+P+AA+HG+G+++ + LLA + +++CK +GF++A
Sbjct: 717 KKDYSTTF-DTLDLIPVAAWHGQGRKSKWWSPILLAVRNEETGSLEAVCKCISGFTDAFY 775
Query: 698 EERSS---SLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ V+ +P Y + PDVWFEP E E + + +I
Sbjct: 776 RANRAFYDEAGENVVVGGKPSYLEYEGGHPDVWFEPKEVWEMAFADITI 824
>gi|345566677|gb|EGX49619.1| hypothetical protein AOL_s00078g108 [Arthrobotrys oligospora ATCC
24927]
Length = 882
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 205/612 (33%), Positives = 319/612 (52%), Gaps = 70/612 (11%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
R+ + L+ F +I++ RI I D + N LRT + P L+P V+L N I P HE
Sbjct: 191 RLSYGLLTRAFVLINSTRSRIKIVDTLTNFLRTAIACDPSSLLPAVWLTTNDIGPPHEQT 250
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS--MMRKPDPLTITK 307
ELGIG + I KAL + G + ++ Y + GD G A ++ Q +RKP PLT+
Sbjct: 251 ELGIGGSVISKALIKVGGLDQKGLRTLYNKYGDAGDAAFEAKVRQRTLQLRKPVPLTVKD 310
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
V+ + I++ G SQE K+ ++ LLV + E +YL R L LRIG + T+L AL
Sbjct: 311 VYSSLVKISQSKGTGSQEVKQRIVERLLVQSRGEEVRYLARTLVQHLRIGAVKTTMLIAL 370
Query: 368 GQAAVYNE--QHSKPPPNIQSPLEEAAK------------IVKQVFSVLPVYEKIVPALL 413
+A + S P PN S L + +K IVK F+ P Y +IVP LL
Sbjct: 371 SRAFLMTHPPNASNPAPNPPSTLSKLSKEAKTEIFSAAEEIVKAYFARCPNYNEIVPGLL 430
Query: 414 TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
T G+ L + C T P+ PML T+ + ++ + FT EYKYDG+RAQIH E
Sbjct: 431 TAGLAGLKDVCKLTVHTPLKPMLGSITRDLPGMLGRLGSRAFTVEYKYDGQRAQIHCDEK 490
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
G V I+SR+ E T K+PD+V + ++ P+V +F+++ E+VA + + + FQTL++R
Sbjct: 491 GRVSIFSRHLENMTEKYPDLVALIPSIRGPNVTTFIMEGEVVAINSDTGDLKNFQTLASR 550
Query: 534 ARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL-- 591
RK+V++ ++V+VC++AFD++ NG+ LL + R RR+ L + F E F + +L
Sbjct: 551 GRKDVTIGTVQVNVCMFAFDLMQLNGEELLGKPFRERRKLLREEFVEVEKRFTWVKSLDA 610
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD----------------------------- 622
T+ D D + +F ++ CEG+++K +D +
Sbjct: 611 TADDQDAVIEFFKGSLKEKCEGVMVKLLDNEVPAEDNGALETDATDLDTLVEELQKKPDS 670
Query: 623 --------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
ATYEP KR +WLK+KKDY S D+LD++PIA +HG G+
Sbjct: 671 KGKSAKGKEGKKGGRRKPLLATYEPDKRLESWLKVKKDYDAST-DTLDVIPIAGWHGMGR 729
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE--RSSSLRSKVIPKPRPYYRFAD 720
++ + LLA + + +++CK +GF++A +E S + + + Y A
Sbjct: 730 KSKWWSPILLAVRNPDTGSLEAVCKCMSGFTDAFYQEMREKYSEDGENTTRTKKSYIEAP 789
Query: 721 TISPDVWFEPTE 732
+ P+VWFEP E
Sbjct: 790 ELHPNVWFEPQE 801
>gi|325088425|gb|EGC41735.1| DNA ligase [Ajellomyces capsulatus H88]
Length = 945
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 209/556 (37%), Positives = 291/556 (52%), Gaps = 86/556 (15%)
Query: 45 SSLNPRRKMSSSAPNAFQVLMSAAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVV 104
S++ P K AP+ + A KKPS PN + + SPKK R
Sbjct: 254 SNVQPVTKRRKRAPSNRKT-----AGKKPSASPNQNKRTRSPKKAR-------------- 294
Query: 105 GEKIQEVAEEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELK 164
+ P+ +KES + + + K KIA+ K
Sbjct: 295 -----------------------EKPVAEDKESSSAEQEDNISENDDDLAEEKPKIAQKK 331
Query: 165 SNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVM 224
V K DP W+ GE VP+ L F +I T R++I LR V+
Sbjct: 332 RETVQQALKGSRKDP--YPDWKAGEPVPYAALCTTFSLIEMTTRRLIILSHCSLFLRQVL 389
Query: 225 ETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLG 284
TP+DL+P V L NK+A + G+ELGIG++ I+KA+ E+ GR+ + +K E+GDLG
Sbjct: 390 RLTPKDLLPTVQLMLNKLAADYAGIELGIGESFIMKAIGESTGRSLAVIKADQHEIGDLG 449
Query: 285 LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC--- 341
LVA SRS+Q M KP PLT+ V + IAK G SQEKK + IK LL +A
Sbjct: 450 LVAAKSRSNQPTMFKPKPLTVRSVHEGLLAIAKTQGHGSQEKKISAIKKLLSSADATLAG 509
Query: 342 ----------------EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE---QHSKPPP 382
E +++IR L+ KLR+GLAE+T+L AL A V +E Q K P
Sbjct: 510 KGSKGIDITQNKGGPSEAKFIIRFLEGKLRLGLAEKTVLVALAHAMVAHEVELQGKKAPS 569
Query: 383 NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKG 442
+ L + I+K V+S LP YE I+PA+L G++NL C PG+P+ PMLAKPTK
Sbjct: 570 TEE--LGKGEAILKSVYSELPSYEVIIPAMLEHGIFNLKEKCKLQPGVPLKPMLAKPTKS 627
Query: 443 VSEIVNKFQDMEFTCEYKYDGERAQIHYLE------------------DGSVEIYSRNAE 484
++E++++F+ FTCEYKYDGERAQIHY+ +G I+SRN+E
Sbjct: 628 ITEVLDRFEGKNFTCEYKYDGERAQIHYVAREEMHKYPSTASTLQKDGEGICAIFSRNSE 687
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
+ K+PD++ + K SFVLDCE VA+D +K+LPFQ L TR RK+V D+K
Sbjct: 688 DLSKKYPDILGKLENWVKQGTTSFVLDCETVAWDTVNKKVLPFQQLMTRKRKDVKAEDVK 747
Query: 545 VDVCIYAFDILYRNGQ 560
V VC++AFD+L+ NG+
Sbjct: 748 VKVCVFAFDLLFLNGE 763
>gi|322708068|gb|EFY99645.1| DNA ligase I, putative [Metarhizium anisopliae ARSEF 23]
Length = 871
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 252/765 (32%), Positives = 374/765 (48%), Gaps = 116/765 (15%)
Query: 76 QPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQ-----EVAEEPSNDL-----VKPISN 125
Q SS ++SS D + + T+ + K+Q EVA+E N+ P SN
Sbjct: 31 QRQSSVATSSADAADVPDLASTELTDEELARKLQDEWNKEVADESKNETENTRSTSPASN 90
Query: 126 -QIDNP-------IDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVL----LKKK 173
ID P ++ + P+ K+ + + S E + +NI L L +
Sbjct: 91 LAIDEPSPAAQPELEPRVTKEAELPASKEDTLTLQSTGMAEDA--ITTNIPLDEPPLIFQ 148
Query: 174 AGEFDPKMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV 232
++ + W +G + L+ F ++S+ RI I D + N LR ++E P L+
Sbjct: 149 PSKYLDLLREHWAAEGGNASYSLLTRCFVLVSSTASRIKIVDTLVNCLRLLIEGDPSSLL 208
Query: 233 PVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRS 292
P V+LA N I+PA+ LELG+G ++I KAL + CG +K Y + GD G VA ++
Sbjct: 209 PAVWLATNSISPAYISLELGLGGSAISKALKQVCGLDNRSLKAIYDKYGDAGDVAFEAKK 268
Query: 293 SQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLL 350
QS +RKP PLTI V+ IA G+ S + K+ + LL A E ++++R L
Sbjct: 269 KQSFTLRKPKPLTIKCVYQDLVKIASSQGQGSAQAKQRIVDRLLQDARGGEESRFIVRTL 328
Query: 351 QSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPL----------EEAAKI------ 394
LRIG + T+L AL +A + S+PP S L EE A+I
Sbjct: 329 CQHLRIGAVKTTMLIALSRAFLL----SRPPGADYSSLSITELSKLKKEELAEIWGKAEE 384
Query: 395 -VKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
VK F+ P Y ++P LL G+ + L C IP+ PML T+ +SE++ K Q
Sbjct: 385 TVKACFARRPNYNDLIPVLLEIGISDELLIRCGLALHIPLRPMLGSITRDLSEMLTKLQG 444
Query: 453 MEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDC 512
+F CEYKYDG+RAQ+H + G V I+SR+ E T K+PD+V V R++ V SF+++
Sbjct: 445 RDFACEYKYDGQRAQVHCDDGGKVSIFSRHLELMTDKYPDLVELVPRIRGEGVSSFIMEG 504
Query: 513 EIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRRE 572
E+VA DRE ++ FQTL+ RARK+V + IK+DVC++AFD+++ NGQPLL R RRE
Sbjct: 505 EVVAVDRETGELKNFQTLTNRARKDVEIGSIKIDVCLFAFDLMFLNGQPLLDRPFRERRE 564
Query: 573 HLYDSFEEEPGFFQFATTL--TSIDLDEIQKF----------------LDAAVD------ 608
L F E P F + +L TS D + + +F LD VD
Sbjct: 565 LLRSLFTEVPHNFTWVKSLDATSSDSETVLEFFKSATESKCEGIMVKILDNLVDIPYLGD 624
Query: 609 -----------------------------ASCEGLIIKTMDRD----ATYEPSKRSLNWL 635
A+ EG KT R ATYEP KR +WL
Sbjct: 625 QEGPAAEETEKLSTPKSKSKAKKKGNGATAAGEGDKKKTGSRRKPLLATYEPDKRLDSWL 684
Query: 636 KLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEA 695
K+KKDY S D+LDL+PIA +HG+G++ + LLA + +++CK +GF++
Sbjct: 685 KVKKDYNSSF-DTLDLIPIAGWHGQGRKAKWWSPVLLAVRNEETGMLEAVCKCMSGFTDT 743
Query: 696 MLEE--------RSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
+ S R + + ++ + PDVWFEP E
Sbjct: 744 FYKAMKQFYDNGEESGERKNTRSQMPSFIEYSGPM-PDVWFEPQE 787
>gi|296420322|ref|XP_002839724.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635918|emb|CAZ83915.1| unnamed protein product [Tuber melanosporum]
Length = 852
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 210/551 (38%), Positives = 299/551 (54%), Gaps = 39/551 (7%)
Query: 214 DIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHV 273
D + N LR ++ P+ L+P V+L N I P++E E GI + I KA+ +A G T + +
Sbjct: 201 DTLVNFLRILIRLDPDSLLPAVWLTTNDIGPSYETNEFGIDGSIISKAIMKASGITPATL 260
Query: 274 KKQYQEMGDLGLVAKASRSSQS--MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRI 331
KK + GD G VA ++ Q MM+KP PLTI V+ T I++ +GK SQE K+ I
Sbjct: 261 KKLNNKHGDPGDVAFEAKVKQRTLMMKKPTPLTIENVYATLVKISRASGKGSQEIKQRHI 320
Query: 332 KALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA--------AVYNEQHSKPPPN 383
+ LLV A E +YL R L LRIG + T+L AL +A A +N P
Sbjct: 321 ERLLVDAKGEEIRYLTRTLIRHLRIGAVKTTMLIALSRAFSLSAPKGANWNT------PE 374
Query: 384 I-------QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
I Q +A + +KQ + P Y IVP LL G+ +L C + P+ PML
Sbjct: 375 IPGSKEGRQELFTKAEEFLKQCHARRPNYNDIVPGLLRGGISSLEENCGTSIHSPLKPML 434
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
T+ + E++ K + EFTCEYKYDG+RAQIH ++G V ++SR+ E TGK+PD+V
Sbjct: 435 GSITRDLGEMLLKLKGCEFTCEYKYDGQRAQIHCDDNGKVSVFSRHLELMTGKYPDLVQL 494
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILY 556
V ++ V SF+++ E+VA D E + FQTL+ R RKNV + I VDVC++AFD++Y
Sbjct: 495 VPNIRGEGVESFIMEGEVVAMDTETGLVKNFQTLAGRERKNVDVGRISVDVCLFAFDLMY 554
Query: 557 RNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT-----TLTSIDLDEIQKFLDAAVDASC 611
NGQ LL R RRE L PG F T + E + L++ S
Sbjct: 555 LNGQELLSRPFRERRELLQSIRGYHPGLLPFIVRPKIFTPPASGPPEGAQELESKQIRSR 614
Query: 612 EGLIIKTMDRD-------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
+G + R ATYEP KR +W K+KKDY + D+LDLVPIAA++G G++
Sbjct: 615 KGKEAAPVKRSSRVKPLLATYEPDKRLESWPKVKKDYTAAT-DTLDLVPIAAWYGNGRKA 673
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKP---RPYYRFADT 721
+ LLA +D F+++CK +GF++ E +L I R YY AD+
Sbjct: 674 AWWSPILLALHDPETGSFEAVCKCMSGFTDKYYIEMKDTLAPDGINTSMTKRAYYEVADS 733
Query: 722 ISPDVWFEPTE 732
++P +WFEP E
Sbjct: 734 LTPAIWFEPRE 744
>gi|119491701|ref|XP_001263345.1| DNA ligase I, putative [Neosartorya fischeri NRRL 181]
gi|119411505|gb|EAW21448.1| DNA ligase I, putative [Neosartorya fischeri NRRL 181]
Length = 833
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 208/609 (34%), Positives = 320/609 (52%), Gaps = 71/609 (11%)
Query: 187 KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAH 246
+G + L+ F + + T RI I D + N LR ++E P ++P V+LA + I+P +
Sbjct: 150 EGGNASYALLTRAFVLANATTSRIRIIDTLVNFLRVLIEGDPSSVLPAVWLATSSISPPY 209
Query: 247 EGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTI 305
+ LELG+G ++I KAL + G +K Y + GD G VA ++ QS + KP PLTI
Sbjct: 210 DELELGLGGSAISKALKKVYGLNPYGLKSLYDKYGDAGDVAFEAKKRQSFTLMKPKPLTI 269
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLL 364
V+ + R IA G SQE K+ ++ LL E +Y++R L LRIG + T+L
Sbjct: 270 KGVYQSLRKIAMSKGTGSQESKQRIVEKLLQDTRGAEESRYIVRTLVQNLRIGAVKTTML 329
Query: 365 AALGQAAVYNEQHSKPP-----------------PNIQSPLEEAAKIVKQVFSVLPVYEK 407
AL +A +Y SKP + A +IVK ++ P Y
Sbjct: 330 IALARAFLY----SKPEGAEFTIRSRQDLARLKKEELAEIYNRAEEIVKASYARHPNYND 385
Query: 408 IVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
+V LL GV L C +P+ PML T+ +SE++ K Q +F+CEYKYDG+RA
Sbjct: 386 LVTCLLEIGVTEELLLRCGLQLHVPLRPMLGSITRDLSEMLTKLQGRDFSCEYKYDGQRA 445
Query: 467 QIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP 526
Q+H E G V I+SR+ E T K+PD+V V++++ V SF+L+ E+VA D + ++
Sbjct: 446 QVHCDEKGKVSIFSRHLENMTEKYPDLVSLVTQIRGEGVSSFILEGEVVAVDNKTGELQT 505
Query: 527 FQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
FQ L+ RA+KNV + I ++VC++AFD++Y NG+PLL R RRE L F E P F
Sbjct: 506 FQVLTNRAKKNVEIGAININVCLFAFDLMYLNGEPLLDRPFRERRELLRSLFVEIPNRFT 565
Query: 587 FATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMD------------------------ 620
+ +L TS D + + +F +A++ CEG+++K +D
Sbjct: 566 WVKSLDATSADSETVLEFFKSALENKCEGIMVKVLDNVPKANLEQNKEAFTSNGMDVTSG 625
Query: 621 -----------RDA---TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
R A TYEP KR +WLK+KKDY S ++LDL+PIA +HG+G++
Sbjct: 626 EPLEKAGKGGRRKALLSTYEPDKRLESWLKVKKDYSTS-SETLDLIPIAGWHGQGRKAKW 684
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRFADTIS 723
+ L+A + +++ K +GF++ + ++ + VI +P + +
Sbjct: 685 WSPILMAVRNPETGSLEAVTKCMSGFTDKFYQANKDKYAEGTPNVISRPAYVEYYGE--- 741
Query: 724 PDVWFEPTE 732
PDVWFEP E
Sbjct: 742 PDVWFEPQE 750
>gi|400601718|gb|EJP69343.1| DNA ligase I [Beauveria bassiana ARSEF 2860]
Length = 867
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 217/628 (34%), Positives = 321/628 (51%), Gaps = 81/628 (12%)
Query: 185 WEK-GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIA 243
W + G + L+ F ++S RI I D + N LR ++E PE L+P V+LA N I+
Sbjct: 161 WSRDGGNASYALLTRCFVLVSGTASRIKIVDTLVNCLRILIEGDPESLLPAVWLATNSIS 220
Query: 244 PAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDP 302
PA+ +ELG+G ++I KAL + CG +K Y + GD G VA ++ QS +RKP P
Sbjct: 221 PAYISMELGLGGSAISKALKQTCGLDGRSLKTLYDKYGDAGDVAFEAKKKQSFTLRKPKP 280
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQ 361
L+I VF + IA G+ S E K+ + LL A E ++++R L LRIG +
Sbjct: 281 LSIKGVFQSLVKIATTQGQGSNEIKQRIVDRLLQDARGGEESRFIVRTLCQHLRIGAVKT 340
Query: 362 TLLAALGQAAVYNE--QHSKPPPNI-------QSPLEE----AAKIVKQVFSVLPVYEKI 408
T+L AL +A + ++ Q NI + L E A +IVK F+ P Y +
Sbjct: 341 TMLIALSRAFLLSKPTQADYETRNIPALAKLKKEELAEIWAKAEEIVKACFAKRPNYNDL 400
Query: 409 VPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQ 467
+P LL GV L C IP+ PML T+ +SE++ K Q +FTCEYKYDG+RAQ
Sbjct: 401 IPNLLEIGVCEELLVRCGLALHIPLRPMLGSITRDLSEMLTKLQGRDFTCEYKYDGQRAQ 460
Query: 468 IHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
+H E G V I+SR+ E T K+PD+V V +++ V SF+++ E+VA D ++ F
Sbjct: 461 VHCDEGGKVSIFSRHLELMTDKYPDLVELVPKIRGDGVSSFIMEGEVVAVDSASGELKNF 520
Query: 528 QTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
Q L+ RARK+V + I V VCI++FD++Y NGQ LL+ R RRE L F E P F +
Sbjct: 521 QALTNRARKDVEIGSITVQVCIFSFDLMYLNGQSLLERPFRERRELLRSLFIEVPNRFTW 580
Query: 588 ATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDR--DATY------------------ 625
+L TS + + + F +A ++ CEG+++K +D D Y
Sbjct: 581 VKSLDATSSESESVLSFFKSATESKCEGIMVKILDNLPDVAYLGDEDGEIKEQEPKLQIP 640
Query: 626 ----------------------------------EPSKRSLNWLKLKKDYIESIGDSLDL 651
EP KR +WLK+KKDY S D+LDL
Sbjct: 641 KSKSKAKGKKKPEDGESNEPAKKKSRRKALLATYEPDKRLDSWLKVKKDYNSSF-DTLDL 699
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE-------AMLEERSSSL 704
+PIA +HG+G++ + LLA + + +++CK +GF++ A ++ S +
Sbjct: 700 IPIAGWHGQGRKAKWWSPILLAVRNEESGMLEAVCKCISGFTDVFYKANKAFYDDGSETG 759
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTE 732
K P + PDVWFEP E
Sbjct: 760 EPKNTHLQMPSFIEYSGPMPDVWFEPQE 787
>gi|302680743|ref|XP_003030053.1| hypothetical protein SCHCODRAFT_235879 [Schizophyllum commune H4-8]
gi|300103744|gb|EFI95150.1| hypothetical protein SCHCODRAFT_235879 [Schizophyllum commune H4-8]
Length = 823
Score = 342 bits (876), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 225/674 (33%), Positives = 343/674 (50%), Gaps = 85/674 (12%)
Query: 133 SEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMV-ACWEKGERV 191
S+ S +PP+P R ++ + A L ++ + FD V A W G V
Sbjct: 64 SKAPSHASPPTPFVRTFSLKNNHAPPSYPSLTTDSL-------SFDVAQVSAQWTAGSPV 116
Query: 192 PFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLEL 251
P+ FL+ +S RI ITD + N LR V++ P L+P VYL +N +AP++E +EL
Sbjct: 117 PYSFLAHTLKSVSETKSRIAITDALTNCLRVVVQHHPASLLPAVYLLSNTVAPSYESVEL 176
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDT 311
G+G SI K++ + G + + ++ Y ++GD+G VA A++S + PL + V+ +
Sbjct: 177 GLG-TSISKSIQQISGLSSAALRDLYNQLGDVGDVAFAAKSKVRTLIPHPPLLVPGVYKS 235
Query: 312 FRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAA 371
IA G+ + ++K+ ++ LL+A+ E ++L R L LR+G TLL AL +A
Sbjct: 236 LLSIAHCKGQGAVKEKQKIVEKLLIASKGEETRFLARTLTQNLRVGAVRTTLLIALSRAF 295
Query: 372 VYNEQHSKPPPNIQ-------------SP-----------------------LEEAAKIV 395
V + P + SP +A +V
Sbjct: 296 VLTPRPDGRPSGLHASEKLLDSVRALGSPPKSPQKKKRADSDDDARERMKALFSQAESLV 355
Query: 396 KQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEF 455
KQV+ P YE I+ AL+T+G+ L S GIP+ P L P + + E+ + QD F
Sbjct: 356 KQVYVRHPCYEDIIEALVTEGLDGLDQHVSLAVGIPLMPTLGSPMRSLDEVYDILQDHPF 415
Query: 456 TCEYKYDGERAQIHYLEDG----SVEIYSRNAERNTGKFPDVV----LAVSRLKKPSVRS 507
E KYDG+RAQIH D SV I+SR+ E T K+PDVV + R P+ S
Sbjct: 416 AAELKYDGQRAQIHGRRDDEGNTSVRIFSRHLEDMTTKYPDVVHMIQIMCGRTTGPT--S 473
Query: 508 FVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQL 567
F++D EIVA D E + FQ LS RARK+V L+D++V V ++AFD+++ +GQ L+
Sbjct: 474 FIIDSEIVALDPETGALKTFQELSNRARKDVQLADVRVAVGVFAFDLMFLDGQELIGLPF 533
Query: 568 RVRREHLYDSF----EEEPGFFQFATT---LTSIDLDEIQKFLDAAVDASCEGLIIKTMD 620
R RR+ LY F EE +F+ + + D I+ F+ A ++ CEGL+IK +D
Sbjct: 534 RERRDKLYSRFPAFVPEEKAIARFSHVDCCDSQLGRDAIEGFMVKATESRCEGLMIKLLD 593
Query: 621 ------RD------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
RD ATYEP KR+ WLKLKKDYI +GDS DLVP+ A+HG G+
Sbjct: 594 SCELEERDAKKAKTRRKPFPATYEPDKRTAAWLKLKKDYITGLGDSFDLVPVGAWHGNGR 653
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSE----AMLEERSSSLRSKVIPKPRPYYRF 718
+ + LLA S + E ++CK +GF++ A+ + + +S+ K +
Sbjct: 654 KAKWWSPILLAL-KSEDGELVAVCKCMSGFTDVFYKALNDRYPLTEQSETCSKQPLWGGD 712
Query: 719 ADTISPDVWFEPTE 732
P+V+F+P E
Sbjct: 713 FGGFRPEVYFKPHE 726
>gi|336371479|gb|EGN99818.1| hypothetical protein SERLA73DRAFT_106637 [Serpula lacrymans var.
lacrymans S7.3]
Length = 876
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 210/621 (33%), Positives = 310/621 (49%), Gaps = 91/621 (14%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W P+ F++ +S RI+I + + N LRT++ P L+P +YL +N ++P
Sbjct: 181 WPANTAAPYAFIAHTLVTLSETRSRIVIINTLTNCLRTLLRYNPSSLLPALYLLSNTLSP 240
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ +ELGIG + I KA+ G T + +K+ Y GD G VA ++S+ + PL
Sbjct: 241 PYSPIELGIGSSVISKAIQHVSGLTPAALKRLYNASGDPGDVAFEAKSNLRTLVPHPPLC 300
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
IT V+D+ IA G+ + ++K+ ++ LLVAA E ++L+R L LR+G ++L
Sbjct: 301 ITAVYDSLIKIANVKGQGANKQKQTIVEKLLVAAKGEEVRFLVRTLSMNLRVGAVRTSIL 360
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLE----------------------------------- 389
AL +A V PP N+ +PL
Sbjct: 361 TALSRAMVLT-----PPSNMSTPLSIDSSYYTNPNLLAAVKPLSTDSKRKVADESRDRVL 415
Query: 390 ----EAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSE 445
A +VK+VF P Y+ IV L F GIP+ P L PT+ + E
Sbjct: 416 AKFSLAESLVKKVFVQHPNYDHIVAGL-------------FEGGIPLHPTLGSPTRSLDE 462
Query: 446 IVNKFQDMEFTCEYKYDGERAQIHYLEDGS----VEIYSRNAERNTGKFPDVVLAVSRL- 500
I ++ D+ FT E+KYDG+RAQIH +D V I+SR+ E T K+PD+V V +
Sbjct: 463 IYDRLGDLSFTAEFKYDGQRAQIHGSKDKDGQVFVRIFSRHLEDMTSKYPDIVSLVKCVF 522
Query: 501 -KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNG 559
P ++ F++D EIVA D + FQ LS RARK+V++ D+KV VC++AFD++ NG
Sbjct: 523 ASSPDLQCFIMDAEIVAIDPAHGSLKSFQELSNRARKDVNIQDVKVAVCVFAFDLMLLNG 582
Query: 560 QPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID-------LDEIQKFLDAAVDASCE 612
+ LL+ R RR L +F + Q A L +D ++ F AV++ CE
Sbjct: 583 EILLERPFRERRSLLRVNFPPQIPKEQGAARLDQVDSFDSEEGRGHVEDFWMKAVESRCE 642
Query: 613 GLIIKTMDRD-------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
GL+IK +D ATYEP KR+ WLKLKKDY+ SIGDSLDLVP
Sbjct: 643 GLMIKLLDSGEVPEEFSLQKDKVKKKPLPATYEPDKRTSAWLKLKKDYVLSIGDSLDLVP 702
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL--RSKVIPK 711
I A+HG G++ G + LLA +S + ++CK +GFS+ E S S +
Sbjct: 703 IGAWHGNGRKAGWWSPILLAVRESTTGDLVAVCKCMSGFSDVFYREMKSRFPEDSDTCSR 762
Query: 712 PRPYYRFADTISPDVWFEPTE 732
+ PDV+F+P E
Sbjct: 763 LPQWECITGGFDPDVYFKPRE 783
>gi|392570124|gb|EIW63297.1| ATP-dependent DNA ligase [Trametes versicolor FP-101664 SS1]
Length = 1014
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 219/628 (34%), Positives = 326/628 (51%), Gaps = 89/628 (14%)
Query: 183 ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKI 242
A W VP+ FL+ +S RI D + N LRT+ P L+P +YL +N +
Sbjct: 305 AAWPPNAPVPYSFLTHALATLSGTRSRIAKLDTLTNALRTISHQHPPSLLPALYLLSNTL 364
Query: 243 APAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP 302
+P + +ELG+G + I KA+ G + + +K+ Y GD G VA ++S+ + P
Sbjct: 365 SPPYSPIELGLGPSIISKAIQHVSGLSSAALKRLYNSTGDPGDVAFEAKSNVRTLIPHPP 424
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
L I V+D IA G + + K+ ++ LLVAA E ++L+R L LR+G A +T
Sbjct: 425 LLIIGVYDALIKIAGAKGSGAAKTKQAVVEKLLVAAKGEETRFLVRTLCQNLRVG-AVRT 483
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPL----------EEAAKI------------------ 394
LAAL +A V N PPP + + L E A I
Sbjct: 484 SLAALARATVLN-----PPPAVSAALTSDSTFHISLETLAAIKPLVGKKKVPDDARDALN 538
Query: 395 ---------VKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSE 445
+K+V+ P Y+ IV ALL G+ L++ T G+P+ P L PT+ + E
Sbjct: 539 AIFALAEGAIKRVYVQHPNYDHIVRALLEGGLEGLADRLPLTIGVPLLPTLGSPTRSLDE 598
Query: 446 IVNKFQDMEFTCEYKYDGERAQIHYLED-GS---VEIYSRNAERNTGKFPDVVLAVSRL- 500
I ++ + FT E+KYDG+RAQIH GS V+I+SR+ E T K+PDVV V +
Sbjct: 599 IYDRLGLLPFTAEFKYDGQRAQIHASRGLGSKHTVKIFSRHLEDMTDKYPDVVSLVGEML 658
Query: 501 -KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNG 559
P +SF++D E+VA D ++ FQ LS RARK+V L D+KV VC++AFD+++ +G
Sbjct: 659 DAAPQTQSFIIDSEVVAVDPATGELKTFQELSNRARKDVKLDDVKVAVCVFAFDVMFLDG 718
Query: 560 QPLLQEQLRVRREHLYDSF------EEEPGFFQFATTLTSIDLDE-IQKFLDAAVDASCE 612
Q L++ R RR L F ++ F ++ S D E +++F AAV++S E
Sbjct: 719 QVLIERPFRERRSLLRTRFPAYTPPQKGAARFDHVRSVESEDGREAVEEFWQAAVNSSSE 778
Query: 613 GLIIKTMDRD-------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
GL++K +D ATYEP KR+ WLKLKKDY+ +GDSLDLVP
Sbjct: 779 GLMVKLLDSGEVLEEPTQNKERPRRKPLPATYEPDKRTSAWLKLKKDYVVGLGDSLDLVP 838
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM---LEER----SSSLRS 706
I A+HG G++ + LLA +D E+ ++CK +GF++A L ER S + S
Sbjct: 839 IGAWHGNGRKVQWWSPILLAVWDPTAEKLVAVCKCMSGFTDAFYKSLHERYPENSDTCSS 898
Query: 707 KVIPKPRPYYRFADT--ISPDVWFEPTE 732
+ +P DT + P+V+F+P E
Sbjct: 899 HPLWQPE-----CDTGGLRPEVYFKPQE 921
>gi|346327036|gb|EGX96632.1| DNA ligase I, putative [Cordyceps militaris CM01]
Length = 865
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 209/627 (33%), Positives = 321/627 (51%), Gaps = 80/627 (12%)
Query: 185 WEK-GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIA 243
W K G + L+ F ++S RI I D + N LR ++E P L+P V+LA N I+
Sbjct: 160 WSKDGGNASYALLTRCFVLVSGTASRIKIVDTLVNCLRLLIEGDPGSLLPAVWLATNSIS 219
Query: 244 PAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDP 302
P++ +ELG+G ++I KAL + CG +K Y + GD G VA ++ Q+ +RKP P
Sbjct: 220 PSYISMELGLGGSAISKALKQVCGLDGRSLKTLYDKYGDAGDVAFEAKKKQNFTLRKPKP 279
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQ 361
L+I V+ + +A G+ S E K+ + LL A E ++++R L LRIG +
Sbjct: 280 LSIQGVYQSLVKVATTQGQGSNEVKQRIVDRLLQDARGGEESRFIVRTLCQHLRIGAVKT 339
Query: 362 TLLAALGQAAVYN-----EQHSKPPPNIQSPLEE--------AAKIVKQVFSVLPVYEKI 408
T+L AL +A + + E ++ P + +E A ++VK F+ P Y +
Sbjct: 340 TMLIALSRAFLLSKPANAEYETRNTPALAKLKKEELAEVWAKAEEVVKACFAKRPNYNDL 399
Query: 409 VPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQ 467
+P LL GV L C IP+ PML T+ +SE++ K Q +FTCEYKYDG+RAQ
Sbjct: 400 IPNLLEIGVCEELLVRCGLALHIPLRPMLGSITRDLSEMLTKLQGRDFTCEYKYDGQRAQ 459
Query: 468 IHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
+H E+G V I+SR+ E T K+PD+V V +++ V SF+++ E+VA D ++ F
Sbjct: 460 VHCDEEGKVSIFSRHLELMTDKYPDLVELVPKIRGDGVSSFIMEGEVVAVDSASGELKNF 519
Query: 528 QTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
Q L+ RARK+V + I V VC+++FD++Y NGQ LL LR RRE L F E P F +
Sbjct: 520 QALTNRARKDVEIGSIIVQVCLFSFDLMYLNGQSLLSRSLRERRELLRSLFTEVPNRFTW 579
Query: 588 ATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDR--DATY------------------ 625
+L +S + + + F +A ++ CEG+++K +D D Y
Sbjct: 580 VKSLDASSTESETVLSFFKSATESKCEGIMVKILDNLPDVAYLGGEDGEAKEEEPKLQLP 639
Query: 626 ---------------------------------EPSKRSLNWLKLKKDYIESIGDSLDLV 652
EP KR +WLK+KKDY S D+LDL+
Sbjct: 640 ISKSKAKGNKKKDAESNEPPKKRSRRKALLATYEPDKRLDSWLKVKKDYSSSF-DTLDLI 698
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE-------AMLEERSSSLR 705
PIA +HG+G++ + LLA + + +++CK +GF++ A +E + +
Sbjct: 699 PIAGWHGQGRKAKWWSPILLAVRNEESGTLEAVCKCISGFTDVFYKANKAFYDEGAETGE 758
Query: 706 SKVIPKPRPYYRFADTISPDVWFEPTE 732
K P + PDVWFEP E
Sbjct: 759 PKNTRLQMPSFIEYSGPMPDVWFEPQE 785
>gi|393245067|gb|EJD52578.1| ATP-dependent DNA ligase [Auricularia delicata TFB-10046 SS5]
Length = 795
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 204/619 (32%), Positives = 313/619 (50%), Gaps = 76/619 (12%)
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
+ P+ FL+ +S+ RILI + + N +R + P L+P +YL +N ++P + L
Sbjct: 85 QAPYEFLAHTLATLSSTRSRILILNALTNTIRLLTVHDPASLLPAMYLLSNGLSPVYLPL 144
Query: 250 -ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
ELGIG A I KAL G + + ++K Y E GD G VA A++SS + PLTI V
Sbjct: 145 PELGIGPAVITKALQHVSGLSNTALRKLYTETGDPGDVAFAAKSSLRTLIAHAPLTIPGV 204
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
+ + IA G+ S + K++ ++ LLVAA E +Y++R L LR+G TLL AL
Sbjct: 205 YKSLLKIATAKGQGSAKTKQSIVEKLLVAAQGEEARYVVRTLGQNLRVGAVRTTLLTALA 264
Query: 369 QAAVYNEQHSKPPPN------------------------------------IQSPLEEAA 392
+A + + P + S +A
Sbjct: 265 RAMALDRAPAVEHPTQSDYYVDPALSRQVSSARTTGKKKKSDAQEDEARQLVNSRFAKAE 324
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
++++VF P Y+ IV ALL G+ L G+P+ P L PT+ + E+ ++ D
Sbjct: 325 ALIRRVFVQHPNYDHIVEALLKYGIERLDEHVQLEVGVPLHPALGTPTRSLDEVYDRLGD 384
Query: 453 MEFTCEYKYDGERAQIHYLEDG----SVEIYSRNAERNTGKFPDVVLAVSRL--KKPSVR 506
FT E K DG+R QIH +V ++SR+ E T K+PD+ V + +P +
Sbjct: 385 AAFTAEMKLDGQRGQIHATRGPDSRLTVRVFSRHLEDMTDKYPDICSLVEHIFAGRPGLT 444
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
S ++D EIVA D++ + FQ LS RARK+V L+D+KV VC++AFD++Y NGQ L+QE
Sbjct: 445 SLIIDSEIVAVDKKTNALRSFQELSNRARKDVQLTDVKVAVCVFAFDLMYLNGQVLIQEP 504
Query: 567 LRVRREHLYDSF------EEEPGFFQFATTLTSIDLDE-IQKFLDAAVDASCEGLIIKTM 619
R RRE L +E F S D E ++ F + A++ EGL++K +
Sbjct: 505 FRRRRELLRAQLPPFVPDDEHSARFDHMANCESADGREAVEDFWNQALELKTEGLMVKLL 564
Query: 620 DRD----------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAF 657
D A+YEP +R+ +W+KLK+DY+ +GDSLDLVP+ A+
Sbjct: 565 DHTSVVEEESIQPGTSKPARRKPLLASYEPDRRTFSWIKLKRDYVTGLGDSLDLVPVGAW 624
Query: 658 HGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM---LEER-SSSLRSKVIPKPR 713
HG G++ + LLACYDS +F +CK +GF++A L ER + S +
Sbjct: 625 HGNGRKASWWSPILLACYDSAKGQFVGVCKCMSGFTDAFYKGLNERYPDTENSATCSRTS 684
Query: 714 PYYRFADTISPDVWFEPTE 732
+ + P+V+F+P E
Sbjct: 685 LWNVETGGLRPEVFFKPRE 703
>gi|171678601|ref|XP_001904250.1| hypothetical protein [Podospora anserina S mat+]
gi|170937370|emb|CAP62028.1| unnamed protein product [Podospora anserina S mat+]
Length = 857
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 211/647 (32%), Positives = 337/647 (52%), Gaps = 93/647 (14%)
Query: 176 EFDPKMVACW--EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP 233
++ P++ W E+G + + L+ F ++S+ RI I D + N LR ++E P L+P
Sbjct: 149 KYVPQLQESWAAERG-KSSYALLTRCFVLVSSTQSRIKIVDTLVNCLRLLIEGDPNSLLP 207
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS 293
V+LA N I+P + +ELG+G ++I KAL + CG +K + +GD G VA ++
Sbjct: 208 AVWLATNAISPPYISMELGLGGSAISKALKQVCGLDNRALKAMHDRLGDPGDVAFEAKKK 267
Query: 294 QSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQ 351
QS ++KP PLTI VF++ IAK G+ S + K+ + LL A E +Y++R L
Sbjct: 268 QSFTLKKPKPLTIKGVFESLVKIAKTQGQGSGDIKQRIVDRLLQDARGGEESRYIVRTL- 326
Query: 352 SKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKI----------------- 394
T+L AL +A + ++ PP P E A++
Sbjct: 327 ------CQHTTMLIALSRAFLLSK-----PPGADFPTREPAELAKLSKEELAEIWSRGEE 375
Query: 395 -VKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
VK F+ P Y ++P LL G+ + L C IP+ PML T+ +SE++ K Q
Sbjct: 376 LVKASFARHPDYNDLIPVLLDIGISDELPIRCGLNLHIPLRPMLGSITRDLSEMLTKLQG 435
Query: 453 MEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDC 512
+F CEYKYDG+RAQ+H DG V I+SR+ E T K+PD+V V +++ V+SF+++
Sbjct: 436 RDFACEYKYDGQRAQVHCDADGKVSIFSRHLELMTDKYPDLVSLVPKIRGEDVQSFIMEG 495
Query: 513 EIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRRE 572
E+VA D+ ++ FQTLS RARK+V++ I ++VC++AFD++Y NGQPLL R RR+
Sbjct: 496 EVVAVDQTTGELKNFQTLSNRARKDVAVGSITINVCLFAFDLMYLNGQPLLDRPFRERRD 555
Query: 573 HLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDR--------- 621
L F E P F + +L TS D + + F +A++ CEG+++K +D
Sbjct: 556 MLRSLFIEIPHHFTWVKSLDATSQDSEPVLTFFKSALETKCEGIMVKILDNLPDIPYEDQ 615
Query: 622 --------------------------------------DATYEPSKRSLNWLKLKKDY-- 641
+TYEP KR +WLK+KKDY
Sbjct: 616 SAAAGLLDNTKPTTTTTTTNKTPLNPPPPQKRSRRKPLLSTYEPDKRLDSWLKVKKDYST 675
Query: 642 -IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEER 700
+ S + LDL+PIAA+HG G+++ + FLLA + + +++CK +GF++ +
Sbjct: 676 SLSSSSEPLDLIPIAAWHGTGRKSQFWSPFLLAVRNEDVGSLEAVCKCMSGFTDNFYKAN 735
Query: 701 SS----SLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ ++ + + K +P + PDVWF PTE E + + ++
Sbjct: 736 KAYYDPAIEGRTLGK-KPGFVEYYGPEPDVWFNPTEVWEVAFADVTV 781
>gi|307105557|gb|EFN53806.1| hypothetical protein CHLNCDRAFT_136511 [Chlorella variabilis]
Length = 1506
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 209/644 (32%), Positives = 332/644 (51%), Gaps = 104/644 (16%)
Query: 177 FDPKMVACWEKGERV-----PFIFLSLVFDMISNETGRILIT-----DIVCNMLRTVMET 226
+DP ACWE GE + P++ L+ F+ + + T R+ I+ D++ N R+V+
Sbjct: 787 YDPVAHACWEPGEPLLREPTPYLHLARAFEAMHSTTKRLRISGRPAADVLVNCFRSVLAL 846
Query: 227 TP-EDLVPVVYLAANKIAPAHE-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLG 284
P E+LV YLA +IAP +E G EL +G + + A+ EA G +++ + Y++MGD G
Sbjct: 847 RPAEELVQTAYLATGRIAPDYEDGTELRVGGSIMTAAIVEATGVSKARLHDMYKDMGDAG 906
Query: 285 LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQ 344
V +A R +Q+++++P PLT+ VF + IA+E G+ SQ++++ + +LL A + EP+
Sbjct: 907 DVFQALRHNQAVLQRPAPLTVPGVFAALQQIAQEKGEGSQKRRQRLVLSLLRACREQEPR 966
Query: 345 YLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
++ R L LR+G ++++ AL +A V +++ + ++ L++AA F V P
Sbjct: 967 FVARTLVQNLRVGANWRSVVPALAKAVVLHKEGGR---VAKARLDQAAAAATTAFHVCPD 1023
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPG---------IPIGPMLAKPTKGVSEIVNKFQDMEF 455
+ A+L C TPG +P+ PMLAK +G+ + V + +D F
Sbjct: 1024 LRLLCDAMLAHPTEEWEQRCLLTPGEGPPLSRHRMPVKPMLAKICEGLEDAVQQMKDAPF 1083
Query: 456 TCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIV 515
E+KYDG RAQIH +E G V I+SR+ E T ++PD V + + +R+
Sbjct: 1084 LAEFKYDGMRAQIHVIEGGQVRIFSRSCEDQTPRWPDAVQQILEAMQGRLRA-------- 1135
Query: 516 AYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLY 575
FQ L++R +K L+++ V VCI+AFD+L+R+G L+ L RRE L
Sbjct: 1136 -----------FQELASR-KKAAELAEVSVHVCIFAFDLLHRDGASLMHLPLEQRREQLL 1183
Query: 576 -----------------------------------------DSFEEEPGFFQ--FATTLT 592
D EE G TL
Sbjct: 1184 LALPNMRPGRCALAQSVRFPEAGAATSPLAAGSSVQLPGPGDQHEEAGGSADDTRGGTLM 1243
Query: 593 SID------------LDE-IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKK 639
I+ L+E +Q+ L A A EGL++K + A YEPSKRS +W+K+KK
Sbjct: 1244 EIEGRIGAHGQEAAPLEERLQEMLLQAFAAGAEGLMLKKL--AAAYEPSKRSDHWIKVKK 1301
Query: 640 DYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
DY+ + D+LDLV I A+HG G++ G + +LLACYD + E+ QS+C+ +GF++A E
Sbjct: 1302 DYVVGLHDTLDLVVIGAWHGNGRKAGWFSPYLLACYDPDTEQLQSVCRCMSGFTDAFYRE 1361
Query: 700 RSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
L +IP +PYY + PD+WFEP E E + S+
Sbjct: 1362 SKERLSQTIIPGHKPYYNTGE--QPDMWFEPREVWEIRGADLSL 1403
>gi|449546932|gb|EMD37901.1| hypothetical protein CERSUDRAFT_65472 [Ceriporiopsis subvermispora
B]
Length = 841
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 212/629 (33%), Positives = 324/629 (51%), Gaps = 71/629 (11%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W + VP+ FL+ ++ RI I +I+ N LR+++ P L+P +YL +N ++P
Sbjct: 121 WPSAKPVPYSFLAHALASLTETRSRIAIVNILTNTLRSIISCDPPSLLPALYLLSNSLSP 180
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ +ELG+G + I KA+ G T + +K+ Y GD G VA ++S+ + PL
Sbjct: 181 PYSPVELGLGPSVISKAIQHVSGLTPAALKRLYNRTGDPGDVAFEAKSNVRTLVPHPPLL 240
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ V+D IA G+ + ++K+ ++ LLVAA E ++L+R L LR+G TLL
Sbjct: 241 VPGVYDALLRIANAKGQGAVKQKQAVVEKLLVAAKGEEIRFLVRTLCQNLRVGAVRTTLL 300
Query: 365 AALGQAAVYNEQHSKPPPNIQS-------------PL--------------------EEA 391
AL +A V P I S PL + A
Sbjct: 301 TALARAIVLTPPRGIPHDTIVSRYHVTQEVLERVKPLVTDSKKKVADPARVQVVEAFQTA 360
Query: 392 AKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ 451
++K+V+ P Y+ IV ALL G+ L+ T G+P+ P L PT+ + EI ++
Sbjct: 361 EALLKEVYVRHPNYDNIVKALLEVGLDGLAECLPLTIGVPLLPTLGSPTRSLDEIYDRLG 420
Query: 452 DMEFTCEYKYDGERAQIH-YLEDGS---VEIYSRNAERNTGKFPDVVLAVSRLKKPSVR- 506
+ FT E+KYDG+RAQIH + DG+ ++I+SR+ E T K+PDVV V + S
Sbjct: 421 LLPFTAEFKYDGQRAQIHAHSLDGASSCIKIFSRHLEDMTDKYPDVVSLVEHILDESADT 480
Query: 507 -SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQE 565
SF++D E+VA D + FQ LS RARK+V L D+KV V ++AFD++Y NGQ LL
Sbjct: 481 VSFIIDAEVVAVDPIDGSLRSFQELSNRARKDVKLDDVKVSVGVFAFDMMYLNGQVLLDR 540
Query: 566 QLRVRREHLYDSFEEEP----GFFQF---ATTLTSIDLDEIQKFLDAAVDASCEGLIIKT 618
R RR L + F P G QF A+ + +++F A++++ EGL+IK
Sbjct: 541 PFRERRALLRNHFPARPPDERGAAQFCHVASCESEAGRQAVEQFWQMALNSASEGLMIKL 600
Query: 619 MDRD-------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
+D ATYEP KR+ WLKLK+DY+ +GDSLDLVP+ A+HG
Sbjct: 601 LDSGDVLEEPSQRKDHPRRKPLPATYEPDKRTSAWLKLKRDYVTGLGDSLDLVPVGAWHG 660
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM---LEERSSSLRSKVIPKPRPYY 716
G++ + LLA +D + ++CK +GF++A L ER L S + +
Sbjct: 661 NGRKAQWWSPILLAVWDPAAGQLVAVCKCMSGFTDAFYKDLRER-YPLDSDTCSRQPLWD 719
Query: 717 RFADT--ISPDVWFEPTERPETSNSPASI 743
DT + P+V+F+P E E + +I
Sbjct: 720 PVCDTGGLKPEVYFKPQEVWEIRGADVTI 748
>gi|398389689|ref|XP_003848305.1| hypothetical protein MYCGRDRAFT_101535 [Zymoseptoria tritici
IPO323]
gi|339468180|gb|EGP83281.1| hypothetical protein MYCGRDRAFT_101535 [Zymoseptoria tritici
IPO323]
Length = 854
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 219/637 (34%), Positives = 320/637 (50%), Gaps = 106/637 (16%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+PF L FD N RI I D + N++R ++ PE L+P V+LA N I+P + +E
Sbjct: 152 IPFDESPLTFDP-ENTQSRIKIVDTLVNLIRVLIVGDPESLLPAVWLATNSISPPYIDVE 210
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVF 309
LG+G ++I KAL + CG S +K Y + GD G VA ++ QS +RKP PLTI VF
Sbjct: 211 LGLGGSAISKALKKVCGLDNSSLKTLYNKHGDAGDVAFEAKKRQSFTLRKPKPLTIKGVF 270
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALG 368
D IA G+ SQE K+ ++ L+ A E +Y++R L LRIG + T+L AL
Sbjct: 271 DGLFKIASAKGQGSQEVKQRIVERLVQDARGAEESRYIVRTLVQHLRIGAVKTTMLIALS 330
Query: 369 QAAVYNEQHSKPPPN-----IQSPLEEAAK------------IVKQVFSVLPVYEKIVPA 411
+A + S+PP QS L + +K +VK F+ P Y +VP
Sbjct: 331 RAFLL----SRPPGTDFAIKSQSELRKLSKQELAEVYSQGEELVKASFARRPNYNDLVPT 386
Query: 412 LLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY 470
LL G+ + L C IP+ PML T+ + E++ K +F+CE+KYDG+RAQ+H
Sbjct: 387 LLEIGIDDELLLRCGLAMHIPLRPMLGGITRDLGEMLTKLHGRDFSCEFKYDGQRAQVHC 446
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
E+G V I+SR+ E T K+PD+V V +++ V SF+L+ E+VA DRE + PFQ L
Sbjct: 447 DENGKVTIFSRHLEVMTDKYPDLVALVPQIRGEGVSSFILEGEVVAVDRESGDLKPFQIL 506
Query: 531 STRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYD-------------- 576
+ RARK+V + +KVDVC+++FD++Y NG+ LL R RR L
Sbjct: 507 ANRARKDVVIQSVKVDVCLFSFDLMYLNGEELLDRSFRERRSLLRSLFVEIPNHFSWVKS 566
Query: 577 ------SFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLI--------------- 615
F+E FF+ AT + + + K LD + E I
Sbjct: 567 MDATSADFDEVSAFFKQATDIKCEGI--MVKVLDNLPNPELEADIEGEAPEGEPEPKPIP 624
Query: 616 -----------------IKTMDRD-----------ATYEPSKRSLNWLKLKKDYIESIGD 647
T+D + ATYEP KR +WLK+KKDY S+ D
Sbjct: 625 TSKGKKSKKAKSKAANSTSTIDTEEKKGSRRKALLATYEPDKRLDSWLKVKKDY-NSLTD 683
Query: 648 SLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR-- 705
+LDL+P+ A+HG+G++ + LLAC + + + K +GF++A + +
Sbjct: 684 TLDLIPVGAWHGQGRKNAWWSPILLACRNPATGSLEVVTKCISGFTDAFYKANRAKYDPD 743
Query: 706 ----------SKVIPKPRPYYRFADTISPDVWFEPTE 732
S IP+P Y +A PDVWFEP E
Sbjct: 744 VDEDDEEGRSSNCIPRP-AYVDYAG--EPDVWFEPQE 777
>gi|428184512|gb|EKX53367.1| hypothetical protein GUITHDRAFT_161026 [Guillardia theta CCMP2712]
Length = 837
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 214/739 (28%), Positives = 347/739 (46%), Gaps = 138/739 (18%)
Query: 74 SPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQI-DNPID 132
+P ++ + KR + + + N V+ E E P+ D + ++ D I
Sbjct: 68 TPASQEANETVDQGKRNLREAEPKRDENEVIELDSSESEERPAADEAQDSEPRLTDKWIK 127
Query: 133 SEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVP 192
+ + + +K+ + ++ + + S+ +L A +++P+ ACW++GE P
Sbjct: 128 LDNSTGGSQIETTDKKLKLEDSTSGSQSDKFDSSRIL----ADDYNPEQDACWKRGEPAP 183
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
++ L+ F I NE GR + +CNM R+++ TPED++P VYLA KIAPAHEG+EL
Sbjct: 184 YLHLARTFSTIDNEKGRYKLRTAMCNMFRSILCLTPEDVLPAVYLAVGKIAPAHEGIELN 243
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTF 312
+GD++I A+AE G + S + + Y ++GDLG VA++ R +Q ++ +P PLT+ VF T
Sbjct: 244 VGDSAISDAVAEVTGVSRSRMHEAYAKLGDLGDVAQSFRRNQRLICQPTPLTVRDVFKTL 303
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
+ IA E G S ++K + LL + + E +Y++R L +RIG+ +L AL A
Sbjct: 304 KAIANEGGAGSSARRKALMTKLLRSCREQETRYIVRTLLQHMRIGMNTTLVLGALATAYH 363
Query: 373 YNEQHS-------------KPPPN------------IQSPLEEAAKIVKQVFSVLP---- 403
+ S + PP I+ L+ AA +S P
Sbjct: 364 LEQDKSIKQEEVEPQATAKRNPPKKAVKGTTKFSVLIEEQLKLAAAAASTAYSECPNLNG 423
Query: 404 ----------VYEK---IVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF 450
VY +VPALL G+ ++ C+ TPG P PMLAK G+++ + KF
Sbjct: 424 PSMNSLAVDDVYASPAVLVPALLEGGIDHMVKKCTVTPGTPFKPMLAKVATGMADAIGKF 483
Query: 451 QD---------MEFTCEYKYDGERAQIHY-LEDGSVEIYSRNAERNTGKFPDVVLAVSRL 500
+ E+ E +YDG+RA IH E G+V+I+SRN E T FP
Sbjct: 484 EKRYGKGCSFLAEYKYEMRYDGQRAMIHVSAESGAVKIFSRNCEDCTASFP--------- 534
Query: 501 KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQ 560
D+ + ++ FD+L+
Sbjct: 535 -----------------------------------------DVVETMQVFVFDLLFLGSD 553
Query: 561 PLLQEQLRVRREHLYDSFEEEP------------GFFQF---------------ATTLTS 593
L++E LRVRR+ L + E+ F F
Sbjct: 554 SLVREPLRVRRQKLVEFLSEDAIAQRRDIEMARGRLFPFRHDAEEKQEEKQEEKQEEKQE 613
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
++ L A++A CEGL++K D A Y P KRS WLK+KKDY+E + DSLDL+P
Sbjct: 614 ERVEGAHAVLLEALEAQCEGLVVKQAD--APYHPGKRSDAWLKVKKDYVEGLADSLDLIP 671
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR 713
I A++G G++ G + +L+A + E QSIC++ +GF++A +E ++ + K++ P
Sbjct: 672 IGAWNGSGRKAGWFSPWLMAVQNPETGELQSICRVMSGFTDAFYKEATARFKDKIVTSPP 731
Query: 714 PYYRFADTISPDVWFEPTE 732
YY + +P WFE +E
Sbjct: 732 SYYITGE--NPSTWFEASE 748
>gi|299751567|ref|XP_001830349.2| DNA ligase [Coprinopsis cinerea okayama7#130]
gi|298409433|gb|EAU91496.2| DNA ligase [Coprinopsis cinerea okayama7#130]
Length = 833
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 209/612 (34%), Positives = 310/612 (50%), Gaps = 65/612 (10%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W + VP+ FL +S RI I + + N L TV+ P L+P +YL +N ++P
Sbjct: 129 WTSAD-VPYSFLCHALATLSQTRSRIAIINTLVNTLVTVIARHPPSLLPALYLLSNSLSP 187
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ LELGIG + + KA+ G + +K+ Y GD+G VA A++S + PLT
Sbjct: 188 PYAALELGIGSSVLSKAIQHVSGLSAPALKRLYNTTGDVGDVAFAAKSKVRTLVPHAPLT 247
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ V+++ IA+ G+ + ++K ++ LLVA E +YL+R L LR+G ++L
Sbjct: 248 VKGVYESLLKIARCKGQGAAQQKGKIVEQLLVAGNGEEIRYLVRTLAQNLRVGAVRTSIL 307
Query: 365 AALGQA-AVYNEQHSKPPPNI----QSPLEEAAKI------------------------- 394
AL +A A++ Q S ++ +S E AA++
Sbjct: 308 TALARAFALHPPQQSSSSTSLFHVSKSLRERAARVSGKKSSSEVSNQEEVKEIFSRAETL 367
Query: 395 VKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDME 454
VK+V+ P Y+ I ALL G+ L+ + T GIP+ P L P + EI ++
Sbjct: 368 VKEVYVQRPCYDDIASALLQHGLPQLAQSVPLTVGIPLHPALGSPNRSFDEIYDRLGGAP 427
Query: 455 FTCEYKYDGERAQIHYLED----GSVEIYSRNAERNTGKFPDVVLAVSR--LKKPSVRSF 508
FT E+KYDG+RAQIH D V+++SR+ E T K+PDVV + R L P+ SF
Sbjct: 428 FTAEFKYDGQRAQIHARRDEEGKTHVKLFSRHLEDMTTKYPDVVATIERMLLDAPATTSF 487
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
+LD EIVA D ++ FQ LS R RK L +IKV V ++AFD++Y N Q LL R
Sbjct: 488 ILDSEIVAIDLTTGELKSFQELSNRPRKGAKLENIKVAVGVFAFDLMYYNQQSLLLAPFR 547
Query: 569 VRREHLYDSF------EEEPGFFQFATTLTSI-DLDEIQKFLDAAVDASCEGLIIKTMDR 621
RR L F ++ F F + S + +F + AV + CEGL+IK +D
Sbjct: 548 ERRALLRSKFSPFNPDDKTLARFDFVDSCESTAGKAAVTEFWEKAVSSRCEGLMIKVLDS 607
Query: 622 -------------------DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
ATYEP KR+ WLKLKKDYIE +GDSLD+VPI A++G G+
Sbjct: 608 MGDNDSSPPASRISRKSQLPATYEPDKRTSAWLKLKKDYIEGMGDSLDMVPIGAWYGNGR 667
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE--RSSSLRSKVIPKPRPYYRFAD 720
+ G + LL +D + ++CK +GF++A + S SL S +
Sbjct: 668 KAGWWSPILLGLWDPSAGRVIAMCKCMSGFTDAFYKNLSESYSLNSDDCSDQSRWDCELG 727
Query: 721 TISPDVWFEPTE 732
PDV+F+P E
Sbjct: 728 GFRPDVYFKPKE 739
>gi|451855500|gb|EMD68792.1| hypothetical protein COCSADRAFT_350522 [Cochliobolus sativus
ND90Pr]
Length = 911
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 210/605 (34%), Positives = 313/605 (51%), Gaps = 59/605 (9%)
Query: 68 AAKKKPSPQPNSSSSSSSP---------------KKRRTLDTQTPKTTNSVVGEKIQEVA 112
AAK P P + +S+ +P K + D + + +V E+
Sbjct: 59 AAKATPKDAPTNPTSNGAPAEQDYSGLTDEELARKLQEKWDKEDRERGQNVAPVSSNELY 118
Query: 113 EEPSNDLVKPISNQ-IDNPIDSE--------KESQPTPPSPKKRKVNVNSVSAKEKI--A 161
EEP +N+ DNP SE KE P+PKK + + S +++E A
Sbjct: 119 EEPEKSTTNTAANEGSDNPKKSESPAFDVALKEIPELAPAPKKNTLTLQSTASEEDTITA 178
Query: 162 ELKSNIVLLKKKAGEFDPKMVACW-EKGERVPFIFLSLVFDMISNETGRILITDIVCNML 220
+ ++ L+ E+ P + W G + L+ F +I++ T RI I D + N+L
Sbjct: 179 NIPFDLSPLEFDPAEYIPDLEKHWVTDGGHATYALLTRCFILINSTTSRIKIVDTLVNLL 238
Query: 221 RTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEM 280
RT++E+ L+P V+L+ N I+P + LELG+G ++I KAL + CG + +K +
Sbjct: 239 RTIIESDSSSLLPAVWLSTNAISPPYINLELGLGGSAISKALKKVCGLDNASLKALSSKH 298
Query: 281 GDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT 339
GD G VA ++ QS +RKP PLTI VFD+ IA G S E K+ ++ L+ A
Sbjct: 299 GDAGDVAFEAKKKQSFTLRKPKPLTIKSVFDSLIKIANSKGNGSVENKQRIVERLVQDAR 358
Query: 340 DCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP---------------- 382
E +Y++R L LRIG + T+L AL +A + SKPP
Sbjct: 359 GAEESRYVVRTLVQHLRIGAVKTTMLIALSRAFML----SKPPGAEFETRNRKDTAKMKK 414
Query: 383 ----NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLA 437
I S EE IVK F+ P Y ++P LL GV + L C IP+ PML
Sbjct: 415 EELVEIYSRNEE---IVKACFARRPNYNDLIPVLLEIGVCDELLVRCGLALHIPLRPMLG 471
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
T+ + E++ K Q +F CEYKYDG+RAQ+H G V I+SR+ E T K+PD+V V
Sbjct: 472 SITRDMGEMLTKLQGRDFACEYKYDGQRAQVHCDAKGKVTIFSRHLEVMTDKYPDLVALV 531
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYR 557
+++ V SF+L+ E+VA DRE + PFQTL+ RARK+V + + +DVC++AFD++Y
Sbjct: 532 PKIRSEGVSSFILEGEVVAVDRESGDLKPFQTLANRARKDVVIGAVTIDVCLFAFDLMYL 591
Query: 558 NGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLI 615
NG+ LL R RR L F E P F + +L TS D++ +Q F A+D CEG++
Sbjct: 592 NGEELLNRSFRERRSLLQSLFVEIPHHFTWVKSLDATSADVEAVQTFFQGAIDTKCEGIM 651
Query: 616 IKTMD 620
+K +D
Sbjct: 652 VKVLD 656
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+TYEP KR +WLK+KKDY + ++LDL+PIAAFHG G++ + LLA ++ +
Sbjct: 715 STYEPDKRLDSWLKVKKDY-STTSETLDLIPIAAFHGSGRKAAWWSPILLAIRNAETGQL 773
Query: 683 QSICKIGTGFSEAMLEERSSSL------RSKVIPKPRPYYRF-ADTISPDVWFEPTE 732
+++ K +GF++A + + + V+P Y + +P VWFEP E
Sbjct: 774 EAVTKCMSGFTDAFYKANRAKYDPGDPDSTTVLPGKPHYVEYNGGAGTPAVWFEPQE 830
>gi|154417137|ref|XP_001581589.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915818|gb|EAY20603.1| hypothetical protein TVAG_162990 [Trichomonas vaginalis G3]
Length = 679
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 198/543 (36%), Positives = 302/543 (55%), Gaps = 36/543 (6%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W +G+ +PF F++ + D + TG++ I D++C ++ TTP+D+VP V+L ++ P
Sbjct: 62 WNRGDPIPFTFITKMVDELEPLTGKLEINDLLCKYFLAILMTTPKDIVPFVFLCLGQLRP 121
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM-----RK 299
HEG+++ IG SII AL + VK++ ++ GDL VA+ RS+Q M +
Sbjct: 122 NHEGVKINIGQESIISALGDK-----KVVKEKLKKEGDLSKVAQQIRSTQKSMTSMFGKV 176
Query: 300 PDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQ---YLIRLLQSKLRI 356
+ TIT V+ F +A G +S + I+ LL T+C+P+ ++R+L+ KLR+
Sbjct: 177 NEAYTITGVYKEFLKMAGFQGANSDRNRTQTIQKLL---TNCKPEEVKCIVRMLECKLRV 233
Query: 357 GLAEQTLLAALGQA---AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL 413
G A ++ L ALG A Y K P+ + L++ + ++++ P+ ++I+ L
Sbjct: 234 GAAHESFLFALGMAFRRREYIMGMIKNNPD-EEDLKDHGHLFREIYYRYPIIDEILVEFL 292
Query: 414 TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
+ GIP PMLAKP K + EI + D T EYKYDGERAQIH ++
Sbjct: 293 RGSFKGAEKNINIKVGIPAMPMLAKPAKKLDEIKRRLGDGRITGEYKYDGERAQIHKNKE 352
Query: 474 GSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
G V I+SR+AE +T KF DV ++ K ++LD EIVAYD EK ILPFQTL R
Sbjct: 353 GKVRIFSRSAEDSTAKFADVADIITDNVKGE--QYILDSEIVAYDPEKHVILPFQTLMNR 410
Query: 534 ARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
+K + VC+ AFD+L NG +L E L RR+ L++ P Q AT +
Sbjct: 411 PKKGTDTPS-AIHVCVCAFDLLSYNGVSMLDEPLEKRRDKLHEIVTVVPTKLQLATYKNA 469
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYI----------- 642
++++ F + AV EGL++KT+ + YE KR+++W KLKKDYI
Sbjct: 470 SKIEDLGDFFEEAVSNRTEGLMVKTL--NGRYECGKRAMSWAKLKKDYISKEVFKGGVAE 527
Query: 643 ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSS 702
E D++D+V I A +G+GKRT VYGAFL+ Y++ + +S+C +GTGF E L+E
Sbjct: 528 EIPPDTIDVVVIGATYGKGKRTSVYGAFLVGVYNNVTGKVESLCFVGTGFKEDDLKEFYE 587
Query: 703 SLR 705
L
Sbjct: 588 KLH 590
>gi|393217635|gb|EJD03124.1| ATP-dependent DNA ligase [Fomitiporia mediterranea MF3/22]
Length = 848
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 201/614 (32%), Positives = 319/614 (51%), Gaps = 71/614 (11%)
Query: 189 ERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
E P+ FL+ +S RI I +I+ N LR ++ P L+P +YL +N +AP +
Sbjct: 142 EPAPYSFLAHTLCSLSGTRSRISIYNILTNALRFIIYHDPSALLPALYLLSNSLAPPYTS 201
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
+ELG+G ++I A+ G T + +K+ Y + GD G VA ++S + LT+T V
Sbjct: 202 IELGLGPSTISSAIQHVSGLTPAALKRLYTKSGDAGDVAFEAKSKLRTLIPHASLTVTGV 261
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
+ + I G + +++++ + LL++A E +YL+R + +R+G ++L AL
Sbjct: 262 YSSLLKICYAKGAGATKQRQSIAEKLLLSAKGEEIRYLVRTMSQHIRVGAVRTSILTALA 321
Query: 369 QAAVYNEQHS--KPPPN-------------------------IQSPLEE--------AAK 393
+A V + K PP+ + PL E A
Sbjct: 322 RALVLTRPANCQKFPPDDSPYFVSPQSLALIKAASGEAKKKAKEDPLREKIMVKFSAAEG 381
Query: 394 IVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDM 453
+VK+V+ P ++ I ALL G L+ + T G+P+ L PT+ + E+ ++ ++
Sbjct: 382 LVKRVYVQHPNFDHIAKALLEGGPEELAEKVTLTVGLPLHHTLGSPTRSLDEVYDRLGNL 441
Query: 454 EFTCEYKYDGERAQIHYL--EDGS--VEIYSRNAERNTGKFPDVVLAVSRLKKPS--VRS 507
FT E+KYDG+RAQIH EDG V I+SR+ E T K+PD+V V + + S +RS
Sbjct: 442 PFTAEFKYDGQRAQIHARKNEDGDLFVRIFSRHLEEMTDKYPDIVALVEEMFRSSSLLRS 501
Query: 508 FVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQL 567
F++D EIVA D + FQ LS RARK+V L D+K+ VC+YAFD+++ N + LL++
Sbjct: 502 FIIDTEIVAIDAVDGSLRTFQELSNRARKDVRLEDVKIKVCVYAFDLMFLNEESLLEQPF 561
Query: 568 RVRREHLYDSFEEEPGFFQFATTLTSIDLDE-------IQKFLDAAVDASCEGLIIKTMD 620
R+RR+ L F F + ++ E +++F AVD EGL+IK +D
Sbjct: 562 RLRRQKLRSYFPPIHPSSPFISKFDHVECCESEEGREAVEEFWQKAVDGRSEGLMIKLLD 621
Query: 621 RD-------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
ATYEP KR+L WLKLKKDY+ +GDSLDLVPI A+HG G
Sbjct: 622 SREVDEDPNGAKTKQRKKPLPATYEPDKRTLAWLKLKKDYVLGLGDSLDLVPIGAWHGNG 681
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM---LEERSSSLRSKVIPKPRPYYRF 718
++ + LLA +D + + +CK +GF++ L+ER + S+ + +
Sbjct: 682 RKAAWWSPILLAVWDEGSGQLVGVCKCMSGFTDEFYKSLQERYAE-GSEACSRTSLWNVN 740
Query: 719 ADTISPDVWFEPTE 732
+ SP+V+F+P E
Sbjct: 741 SGGYSPEVYFKPQE 754
>gi|395332924|gb|EJF65302.1| ATP-dependent DNA ligase [Dichomitus squalens LYAD-421 SS1]
Length = 752
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 225/651 (34%), Positives = 333/651 (51%), Gaps = 94/651 (14%)
Query: 177 FDPKMVAC--WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
+DP AC W VP+ FL+ +S+ RI D + N LRT+ P L+P
Sbjct: 27 YDP---ACTPWAPQSPVPYSFLAHALATLSSTRSRIAKLDTLTNALRTICRQHPPSLLPA 83
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGL--------V 286
+YL +N ++P + ELG+G +I KA+ G + + +K+ Y GD G V
Sbjct: 84 LYLLSNALSPPYSPTELGLGPTTISKAIQHVSGLSPAALKRLYNATGDPGQPRAFSDRDV 143
Query: 287 AKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYL 346
A ++S+ + PL IT V+ + IA G + + K+ ++ LLV+A E +YL
Sbjct: 144 AFEAKSNVRTLIPHPPLLITGVYSSLLKIAHAKGPGAAKTKQAIVEKLLVSARGEETRYL 203
Query: 347 IRLLQSKLRIGLAEQTLLAALGQAAVYNE--QHSKPPPNIQSP-------LEE------- 390
+R L LR+G A +T LAAL +A V + S P P+ SP LEE
Sbjct: 204 VRTLGQNLRVG-AVRTSLAALARAMVLTPPVELSAPTPD-DSPFRISAELLEEVKPLLAQ 261
Query: 391 -----------------AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIG 433
A ++K+V+ P Y+ IV ALL G+ LS T G+P+
Sbjct: 262 KKVADEARDALNDVYLRAESLIKRVYVQHPNYDHIVKALLEVGLDGLSAQLPLTVGVPLL 321
Query: 434 PMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS----VEIYSRNAERNTGK 489
P L PT+ + EI ++ + FT E+KYDG+RAQIH + V+++SR+ E T K
Sbjct: 322 PTLGSPTRSLDEIYDRLGFLPFTAEFKYDGQRAQIHASRGDNDRPFVKLFSRHLEDMTDK 381
Query: 490 FPDVVLAVSR--LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV 547
+PDVV V L P SF++D E+VA D + FQ LS RARK V L ++KV V
Sbjct: 382 YPDVVSLVDGIFLSTPQTESFIIDAEVVAIDPGTGALKTFQELSNRARKEVKLDEVKVAV 441
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSF------EEEPGFFQFATTLTSIDLDEI-Q 600
C++AFD++Y +GQ LL+ R RR L F ++ F ++ S D E+ +
Sbjct: 442 CVFAFDLMYLDGQILLERSFRDRRTVLRTRFPPYTPPQKGAARFDHVKSVESEDGREVVE 501
Query: 601 KFLDAAVDASCEGLIIKTMDRD-------------------ATYEPSKRSLNWLKLKKDY 641
+F AAV++S EGL++K +D ATYEP KR+ WLKLKKDY
Sbjct: 502 EFWQAAVNSSSEGLMVKLLDSGEILEEPNQKKDKPRRKPLPATYEPDKRTSAWLKLKKDY 561
Query: 642 IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM---LE 698
+ + DSLDLVPI A+HG G++ + LLA +D + E+ ++CK +GF++A L
Sbjct: 562 VTGLSDSLDLVPIGAWHGNGRKAQWWSPILLAVWDPDAEKLVAVCKCMSGFTDAFYKSLR 621
Query: 699 ER----SSSLRSKVIPKPRPYYRFADT--ISPDVWFEPTERPETSNSPASI 743
ER S S S+ + +P DT + P+V+F+P E E + +I
Sbjct: 622 ERYPEDSDSCSSRPMWEPE-----CDTGGLRPEVYFKPQEVWEIRGADITI 667
>gi|449679327|ref|XP_002160108.2| PREDICTED: DNA ligase 1-like [Hydra magnipapillata]
Length = 625
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/326 (50%), Positives = 217/326 (66%), Gaps = 12/326 (3%)
Query: 323 SQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP 382
S KK I+ + VA + E +YLIR L KLRIGLAEQ++L+ALGQA V PP
Sbjct: 270 SMAKKIEIIQQMFVACKNSEARYLIRSLGGKLRIGLAEQSVLSALGQAVVLTPPGQDYPP 329
Query: 383 NI------------QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
I ++ +EA+ +K + LP Y+ I+P LL +G L TC TPGI
Sbjct: 330 QIIDASTILSSEKLKAECDEASLAIKTAYCELPSYDIIIPQLLLNGWRKLPLTCHITPGI 389
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
P+ PMLA PTKGVSE++ +F D +F CEYKYDGERAQIH L++G V+IYSRN E NT K+
Sbjct: 390 PLKPMLAHPTKGVSEVLKRFDDAKFVCEYKYDGERAQIHLLDNGEVKIYSRNQENNTSKY 449
Query: 491 PDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIY 550
PD+V + ++ K VRS ++D E VA+D+E ++ILPFQ L+TR RK+V +DIKV VC++
Sbjct: 450 PDIVARIPKVIKTHVRSCIIDTESVAWDQENKRILPFQVLTTRKRKDVEENDIKVQVCVH 509
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
AFD+LY NG+ L+ + RRE L +F + G F FAT D DEI +FLD ++ +
Sbjct: 510 AFDLLYLNGESLVGKPFSKRRELLMSAFNQVEGEFVFATAKILSDTDEISEFLDESIQGN 569
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLK 636
CEGL++KT+D DATYE +KRS NWLK
Sbjct: 570 CEGLMLKTLDVDATYEIAKRSHNWLK 595
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW K E VP+ L+ F I + R+ I ++CN R+V+ TP DL+P VY
Sbjct: 205 YHPMKNACWCKNENVPYEALTRTFQEIEEISARLKIQSVLCNFFRSVIVLTPNDLLPCVY 264
Query: 237 LAANK 241
L NK
Sbjct: 265 LCLNK 269
>gi|390602448|gb|EIN11841.1| DNA ligase [Punctularia strigosozonata HHB-11173 SS5]
Length = 856
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 210/645 (32%), Positives = 325/645 (50%), Gaps = 92/645 (14%)
Query: 176 EFDP---KMVAC-WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDL 231
+ DP + AC W PF FL+ +F +S RI I + + N LR ++ L
Sbjct: 121 DIDPLSLDLTACPWRSSSPAPFSFLTHLFATLSQTRSRIRILNTITNGLRMLLRYDAASL 180
Query: 232 VPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASR 291
+P ++L +N ++P + +ELG+G A + +A+ G T + +K Y + GD G VA ++
Sbjct: 181 LPALWLLSNTLSPPYSAVELGLGPAVLHRAIQHISGLTSAALKTLYNKHGDPGDVAFEAK 240
Query: 292 SSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQ 351
S+ + PLTIT V IA G+ + ++K+ ++ LL+AA E +YL+R L
Sbjct: 241 SNVRTLLPHPPLTITGVHGGMLKIASAKGEGAAKQKQAIVEKLLIAAKGEETRYLVRSLC 300
Query: 352 SKLRIGLAEQTLLAALG-----------------------------QAAVYNEQHSKPPP 382
R+G A T+L AL QA +E +
Sbjct: 301 QNNRVGAARITVLTALARSIVLTSPPTLNISIAGESRYHASAELLAQAICDDESADEARK 360
Query: 383 NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL---------SNTCSFTP----- 428
I + + E+ ++K+ F P Y IV ALL G+ + + C +P
Sbjct: 361 RIGAQMTESEALIKKTFVQRPDYNAIVSALLEGGLDGIIDRVPLAVGESFCRPSPEFYWL 420
Query: 429 ----GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH-YLEDG--SVEIYSR 481
GIP+ P L PT+ + EI +F+D+ F E+KYDG+RAQ+H + E G V+I+SR
Sbjct: 421 IPIAGIPLHPTLGSPTRSLDEIYERFEDLPFVAEFKYDGQRAQVHVWAEPGVTHVKIFSR 480
Query: 482 NAERNTGKFPDVVLAVSRLKK--PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVS 539
+ E T K+PDVV ++ + + P SF+LD E+VA D E I FQ LS RARK S
Sbjct: 481 HLEDMTEKYPDVVALMNHIYETSPDKESFILDAEVVAVDAEDGSIRSFQELSNRARKVQS 540
Query: 540 LSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEE----EPGFFQF---ATTLT 592
+++K+ VC++AFD++Y N + LL E R RRE L+ F PG +F + +
Sbjct: 541 SAEVKIAVCVFAFDLMYLNSKVLLCEPFRKRRELLHTHFTPFVPLGPGIARFDHVESCGS 600
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRD-------------------ATYEPSKRSLN 633
D +++F AV++ CEGL+IK ATYEP KR+
Sbjct: 601 EQGRDYVEEFWQQAVESRCEGLMIKACMFGEVHDGTGPHQSKSRRKPLPATYEPDKRTSA 660
Query: 634 WLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFS 693
WLKLKKDY+ +GDSLDLVP+ A+HG G++ + LLA D++ + ++CK +GF+
Sbjct: 661 WLKLKKDYVSGLGDSLDLVPVGAWHGNGRKAQWWSPILLAVRDASTGQLVAMCKCMSGFT 720
Query: 694 EAMLEERSSSLRSKVIP-----KPRPYYRF-ADTISPDVWFEPTE 732
+ + +LR K P R ++ + P+V+F+P E
Sbjct: 721 DTFYK----ALREKYAPGSDNCASRNIWQVETGGLKPEVYFKPVE 761
>gi|346979093|gb|EGY22545.1| DNA ligase [Verticillium dahliae VdLs.17]
Length = 813
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 204/617 (33%), Positives = 308/617 (49%), Gaps = 94/617 (15%)
Query: 176 EFDPKMVACW-EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
E+ + W +G + L+ F ++++ RI I D + N +R +++T PE L+P
Sbjct: 156 EYSSHLKDHWASEGGDASYALLTRCFILVNSTQSRIKIVDTLVNCIRLIIQTDPESLLPA 215
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
V+LA N I+P + LELG+G ++I KAL + CG +K Y + GD G VA ++ Q
Sbjct: 216 VWLATNAISPPYISLELGLGGSAISKALKQVCGLNGPSLKNLYDKYGDAGDVAFEAKKKQ 275
Query: 295 SM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSK 353
S +RKP PLTI V+ + IA +AL A + P ++ +
Sbjct: 276 SFTLRKPKPLTIKAVYQSLVKIAN-------------TQALARAFSLTSPPGADFAVRDR 322
Query: 354 LRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL 413
+ ++ LA + +A +IVK F+ P Y +VP LL
Sbjct: 323 GSLAKLKKEELAEV--------------------WAKAEEIVKACFAKRPNYNDLVPILL 362
Query: 414 TDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLE 472
GV + L C T IP+ PML T+ ++E++ K Q +F CEYKYDG+RAQIH
Sbjct: 363 EIGVCDELLIRCGLTLHIPLRPMLGSITRDLTEMLTKLQGRDFACEYKYDGQRAQIHCDA 422
Query: 473 DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLST 532
G V I+SR+ E T K+PD+V + +++ V SFV++ E+VA DR+ + FQ L+
Sbjct: 423 KGKVSIFSRHLELMTDKYPDLVALMPQIRGEGVDSFVMEGEVVAIDRQTGDMKNFQALTN 482
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL- 591
RARK+V++ I+VDVC+Y+FD++Y NG+PLL R RRE L F E P F + +L
Sbjct: 483 RARKDVAIGSIQVDVCMYSFDLMYLNGEPLLDRPFRERRELLRSMFIEVPHQFTWVKSLD 542
Query: 592 -TSIDLDEIQKFLDAAVDASCEGLIIKTMDR----------------------------- 621
TS D D + F +A D CEG+++K +D
Sbjct: 543 ATSQDSDAVLDFFKSATDIKCEGIMVKILDNLTEVPCQGGEVDAPVDEMEEPQTPSKRKA 602
Query: 622 ------------------DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
ATYEP KR +WLK+KKDY S D++D++P+A +HG+G++
Sbjct: 603 PGKIAENDTKKKTRRKPLLATYEPDKRLDSWLKVKKDYNASF-DTIDMIPVAGWHGQGRK 661
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEER-----SSSLRSKVIPKPR---PY 715
+ LLA + ++ F+ +CK +GF++ + S S VI R P
Sbjct: 662 AKWWSPILLAVRNEDSGSFEVVCKCISGFTDTFYKANREFYDDGSGGSGVIQNIRSSKPA 721
Query: 716 YRFADTISPDVWFEPTE 732
+ PDVWFEP E
Sbjct: 722 FIEYSGPEPDVWFEPQE 738
>gi|409045002|gb|EKM54483.1| hypothetical protein PHACADRAFT_162874 [Phanerochaete carnosa
HHB-10118-sp]
Length = 790
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 206/626 (32%), Positives = 319/626 (50%), Gaps = 73/626 (11%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W++ + P+ FL+ +S+ RI I +++ N LR +++ P L P +YL +N +AP
Sbjct: 91 WQR-KSAPYSFLAHGLATLSSTKSRIAIMNVLTNTLRAIIKFHPISLCPALYLLSNTLAP 149
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ +ELG+G + + KA+ + G T + +++ Y GD G VA ++S+ + L
Sbjct: 150 PYTPIELGLGPSIMSKAIQDVSGLTSAALRRLYNSTGDPGDVAFEAKSNVRTLVPHPSLL 209
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I V+D+ IA+ G + + K++ ++ LLV+A E +YL+R L LR+G ++L
Sbjct: 210 IVGVYDSLLKIAQSKGTGAAKAKQSIVQKLLVSAKGEETRYLVRTLGQNLRVGAVRTSIL 269
Query: 365 AALGQAAVYNEQHSKPPPNIQS----------------PLEEAAK--------------- 393
AL +A V PP +IQS PL +K
Sbjct: 270 TALARAMVLT-----PPASIQSAGSASYASDALLAEIKPLPAGSKKKMADTARDDLLEKF 324
Query: 394 -----IVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVN 448
++K+ + + P Y+ I AL+ G+ L+ T GIP+ P L P + + E+ +
Sbjct: 325 TRAEAVIKKAYVLHPNYDHIAAALVDVGLDGLAERLPLTVGIPLLPTLGSPVRSLDEVYD 384
Query: 449 KFQDMEFTCEYKYDGERAQIHYLE--DGS--VEIYSRNAERNTGKFPDVVLAVSRLKKPS 504
F+ E+KYDG+RAQIH GS V+I+SR+ E T K+PDV V + S
Sbjct: 385 LLGSQPFSAEFKYDGQRAQIHAARRSQGSNIVKIFSRHLEDMTDKYPDVSSLVQDIFANS 444
Query: 505 --VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPL 562
SF+LD EIVA D + FQ LS RAR++V L D+KV V ++AFD++Y NG+ L
Sbjct: 445 QETESFILDAEIVAIDPVDGSLKSFQELSNRARRDVKLDDVKVSVSVFAFDLMYLNGEIL 504
Query: 563 LQEQLRVRREHLYDSF------EEEPGFFQFATTLTSIDLDE-IQKFLDAAVDASCEGLI 615
L+ R+RR L F FQ + S D E +++F AV + EGL+
Sbjct: 505 LERPFRLRRSLLRTVFPPVVPDSTSAAQFQHVQSCESADGREAVEQFWQEAVSSRSEGLM 564
Query: 616 IKTMDRD--------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
IK +D ATYEP KR+ WLKLKKDY+ +GDSLDLVP+ A+HG G
Sbjct: 565 IKLLDSGLVTEDNKSRRKPLPATYEPDKRTAAWLKLKKDYVTGLGDSLDLVPVGAWHGNG 624
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM---LEERSSSLRSKVIPKPRPYYR- 717
++ + LLA +D + + ++CK +GFS+A L+ER +P+ Y
Sbjct: 625 RKAQWWSPILLAVWDPSTGKLVAVCKCMSGFSDAFYKELKERYLEDSETCSRQPQWNYEV 684
Query: 718 FADTISPDVWFEPTERPETSNSPASI 743
+ P V+F+P E E + +I
Sbjct: 685 LTGGLKPQVYFKPQEVWEIRGADITI 710
>gi|195358469|ref|XP_002045213.1| GM13668 [Drosophila sechellia]
gi|194123258|gb|EDW45301.1| GM13668 [Drosophila sechellia]
Length = 656
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/431 (39%), Positives = 255/431 (59%), Gaps = 22/431 (5%)
Query: 334 LLVAATDCEPQYLIRLLQ-----SKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPL 388
+LV+ D P + + Q L +G+AE TL+ A+ +A N H K + L
Sbjct: 158 MLVSPEDLLPSVYLSINQLAPAYEGLELGVAETTLMKAICKATGRNLAHIKSQTQLIGDL 217
Query: 389 ---EEAAKI------------VKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG-IPI 432
E +++ V+ VF L KI D V+N+ C + I
Sbjct: 218 GIVAEQSRVSQRMMFQPAPLNVRDVFRKLREIAKISGQSKMDLVYNMFVACRLSEARFFI 277
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
++ K G++E + + K + + + +G + I+SRN+E NT K+PD
Sbjct: 278 RSLIGKLRIGIAE-QSLLTALAIGLVKKNHIDDCKASKVPEGEISIFSRNSENNTAKYPD 336
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAF 552
++ + L K V+S+++D EIVA+D E+++ILPFQ LSTR RKNV + +IKV VC+Y F
Sbjct: 337 LIARSTGLLKGDVKSYIIDSEIVAWDVERKQILPFQVLSTRKRKNVDIEEIKVQVCVYIF 396
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCE 612
D+LY NG L+ + L RR+ L + F+E G ++FAT L + D+DE+Q+FL+ ++ +CE
Sbjct: 397 DLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLEESIKGNCE 456
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
GL++KT+D +ATYE +KRS NWLKLKKDY+ ++GDSLDLV I + G+G+RTG YG FLL
Sbjct: 457 GLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLL 516
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
ACYD+ NEE+QSICKIGTGF++ L+ S L V + YYR+ ++ PD WFEP +
Sbjct: 517 ACYDTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYRYDPSLEPDHWFEPVQ 576
Query: 733 RPETSNSPASI 743
E + S+
Sbjct: 577 VWEVKCADLSL 587
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 149/261 (57%), Gaps = 19/261 (7%)
Query: 120 VKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGE--- 176
V+P+S +DSE+++ P K+ K V+ + K K+ + N K+ E
Sbjct: 53 VEPMS------VDSEEKTSPVKNVKKEPKDTVDKTTDK-KVTTIGLNSTSASKEDAENYD 105
Query: 177 -----FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDL 231
+ P A W+ + P++ L+ F +I GR+ + D + N +VM +PEDL
Sbjct: 106 PSADSYHPLKNAYWKDKKVTPYLALARTFQVIEETKGRLKMIDTLSNFFCSVMLVSPEDL 165
Query: 232 VPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASR 291
+P VYL+ N++APA+EGLELG+ + +++KA+ +A GR +H+K Q Q +GDLG+VA+ SR
Sbjct: 166 LPSVYLSINQLAPAYEGLELGVAETTLMKAICKATGRNLAHIKSQTQLIGDLGIVAEQSR 225
Query: 292 SSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQ 351
SQ MM +P PL + VF R IAK +G + K + + + VA E ++ IR L
Sbjct: 226 VSQRMMFQPAPLNVRDVFRKLREIAKISG----QSKMDLVYNMFVACRLSEARFFIRSLI 281
Query: 352 SKLRIGLAEQTLLAALGQAAV 372
KLRIG+AEQ+LL AL V
Sbjct: 282 GKLRIGIAEQSLLTALAIGLV 302
>gi|452004944|gb|EMD97400.1| hypothetical protein COCHEDRAFT_1124878 [Cochliobolus
heterostrophus C5]
Length = 921
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 200/551 (36%), Positives = 296/551 (53%), Gaps = 48/551 (8%)
Query: 109 QEVAEEPSNDLVKPISNQI-DNPIDSE--------KESQPTPPSPKKRKVNVNSVSAKEK 159
E+ EEP +N+ DN SE KE P+PKK + + S +++E
Sbjct: 123 NELYEEPEKSTTNTAANESSDNAKKSESPARDIALKEIPELAPAPKKNTLTLQSTASEED 182
Query: 160 IAELKSNIVL----LKKKAGEFDPKMVACW-EKGERVPFIFLSLVFDMISNETGRILITD 214
+ +NI L L+ ++ P + W G + L+ F +I++ T RI I D
Sbjct: 183 T--ITANIPLDQSPLEFDPADYIPDLKKHWVTDGGHATYALLTRCFILINSTTSRIKIVD 240
Query: 215 IVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVK 274
+ N+LRT++E+ P L+P V+L+ N I+P + LELG+G ++I KAL + CG + +K
Sbjct: 241 TLVNLLRTIIESDPSSLLPAVWLSTNAISPPYIDLELGLGGSAISKALKKVCGLDNASLK 300
Query: 275 KQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKA 333
+ GD G VA ++ QS +RKP PLTI VFD+ IA G S E K+ ++
Sbjct: 301 ALSSKHGDAGDVAFEAKKKQSFTLRKPKPLTIKSVFDSLVKIANSKGNGSVENKQRIVER 360
Query: 334 LLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP---------- 382
L+ A E +Y++R L LRIG + T+L AL +A + SKPP
Sbjct: 361 LVQDARGAEESRYVVRTLVQHLRIGAVKTTMLIALSRAFML----SKPPGAEFETRDRKD 416
Query: 383 ----------NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIP 431
I S EE IVK F+ P Y ++P LL GV + L C IP
Sbjct: 417 MAKMKKEELVEIYSRNEE---IVKACFARRPNYNDLIPVLLEIGVCDELLVRCGLALHIP 473
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFP 491
+ PML T+ + E++ K Q +F CE+KYDG+RAQ+H G V I+SR+ E T K+P
Sbjct: 474 LRPMLGSITRDMGEMLTKLQGRDFACEFKYDGQRAQVHCDAKGKVTIFSRHLEVMTDKYP 533
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYA 551
D+V V +++ V SF+L+ E+VA DRE + PFQTL+ RARK+V + + +DVC++A
Sbjct: 534 DLVALVPKIRGEGVSSFILEGEVVAVDRESGDLKPFQTLANRARKDVVIGAVTIDVCLFA 593
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDA 609
FD++Y NG+ LL R RR L F E P F + +L TS D++ +Q F A+D
Sbjct: 594 FDLMYLNGEELLNRPFRERRSLLRSLFVEIPHHFTWVKSLDATSADVEAVQTFFQGALDI 653
Query: 610 SCEGLIIKTMD 620
CEG+++K +D
Sbjct: 654 KCEGIMVKVLD 664
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 8/117 (6%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+TYEP KR +WLK+KKDY + ++LDL+PIAAFHG G++ + LLA ++ +
Sbjct: 724 STYEPDKRLDSWLKVKKDY-STTSETLDLIPIAAFHGSGRKAAWWSPILLAIRNAETGQL 782
Query: 683 QSICKIGTGFSEAMLEERSSSL------RSKVIPKPRPYYRF-ADTISPDVWFEPTE 732
+++ K +GF++A + + + V+P Y ++ +P VWFEP E
Sbjct: 783 EAVTKCMSGFTDAFYKANRAKYDPGDADSTTVLPGKPHYVKYNGGAGTPAVWFEPQE 839
>gi|392593814|gb|EIW83139.1| DNA ligase [Coniophora puteana RWD-64-598 SS2]
Length = 780
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 206/633 (32%), Positives = 324/633 (51%), Gaps = 83/633 (13%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W G P+ FL +S RI+I +++ N+L T++ + ++P +YL +N + P
Sbjct: 75 WPPGTPAPYAFLVHGLVTLSGTKSRIIILNVLTNVLCTLLRHHTDSVLPALYLLSNTLTP 134
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ LELG+G + I KA+ G T + +KK Y + GD G VA ++S+ + PL
Sbjct: 135 PYSPLELGLGGSIISKAIQHVSGLTPAALKKLYVKSGDPGDVAFEAKSNVRTLVAHKPLL 194
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
IT V+D+ +IA G+ + ++K++ + LLV+A E +YL+R L LR+G ++L
Sbjct: 195 ITGVYDSLLMIAHTKGEGATKRKQSIAEKLLVSAKGEESRYLVRTLCLNLRVGAVRLSIL 254
Query: 365 AALGQAAVYNEQHSKPPPNI----------------------------QSPLEE------ 390
AL +A V PP ++ +P+ E
Sbjct: 255 TALARAVVLT-----PPSDVADSTESLYFDSSLVSSDVTSAAQKGKKKDNPVREQLVAKW 309
Query: 391 --AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVN 448
A ++++++ P Y+ IV + + G+ L+ T GIP+ P L PT+ + EI
Sbjct: 310 NYAEALIRRIYVQHPNYDHIVEGINSGGLNGLAGRVPLTIGIPLHPTLGSPTRSLDEIYE 369
Query: 449 KFQDMEFTCEYKYDGERAQIH--YLEDG--SVEIYSRNAERNTGKFPDVVLAVSRL--KK 502
+ + FT E+KYDG+RAQIH + +G V+I+SR+ E T K+PDVV V + +
Sbjct: 370 RLNNQPFTAEFKYDGQRAQIHGKRMANGQIDVKIFSRHLEDMTSKYPDVVSLVYDIFSRS 429
Query: 503 PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPL 562
+ SF+ D EIVA + + + FQ LS RARK+V+L DIK+ VC+Y FD++Y N +P
Sbjct: 430 EHLSSFITDSEIVAIEPKTGVLRSFQELSNRARKDVTLGDIKISVCVYLFDLMYLNDKPF 489
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL----------DEIQKFLDAAVDASCE 612
L+ R RRE L + F P F + +D + I++F AV++S E
Sbjct: 490 LEHPFRERRERLRECF---PPFVPEDSRFARLDHVDSCESTTGREAIEEFWQRAVESSSE 546
Query: 613 GLIIKTMDRD-------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
GL+IK +D ATYEP KR+ WLKLKKDY+ES+GDSLDLVP
Sbjct: 547 GLMIKLLDNTEVEATDGAEKEKGRKKPLPATYEPDKRTSAWLKLKKDYVESVGDSLDLVP 606
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL---RSKVIP 710
+ A++G G++ G + LLA D+ + ++CK +GFS+A + + P
Sbjct: 607 VGAWYGNGRKAGWWSPILLAVRDAESGRLVALCKCMSGFSDAFYKSMKAEYAEDTENCSP 666
Query: 711 KPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
PR + PD++F P E + +I
Sbjct: 667 VPR-WESEMGGFRPDMYFRPIHVWEVRGADITI 698
>gi|389737970|gb|EIM79176.1| DNA ligase [Stereum hirsutum FP-91666 SS1]
Length = 822
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 303/575 (52%), Gaps = 66/575 (11%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ FL+ +S R +IT+ + N LRT+ L+P +YL +N I+P + LE
Sbjct: 125 IPYSFLAHTLFTLSTTRSRNIITNSLTNALRTICAVHEPSLMPSLYLLSNSISPPYLSLE 184
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
LG+G + I KA+ G T + +K+ Y + GD G VA ++++ + PL+I V+
Sbjct: 185 LGLGHSIISKAIQNVSGLTPAALKRLYNQKGDPGDVAFEAKANVRTLLPHAPLSIVGVYQ 244
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
+ IA G+ S + K++ ++ LLV+A E ++L+R L +R+G T+L AL +A
Sbjct: 245 SLLKIATAKGEGSVKHKQSIVEKLLVSAKGEEIRFLVRTLAQHIRVGAVRTTILTALARA 304
Query: 371 -------AVYNEQ---HSKPP---------------------PNIQSPLEEAAKIVKQVF 399
AV Q ++ PP +++ + A +VKQVF
Sbjct: 305 MALTPPRAVKVRQRPFYASPPLLTRVTNAESTKGKKDVDASRVELEAIYDAAEGLVKQVF 364
Query: 400 SVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
P Y+ IV LL G+ L+ + T GIP+ P L P + + ++ + ++ F E+
Sbjct: 365 VQHPSYDDIVVGLLAKGLDGLAESVPLTLGIPLHPTLGSPMRSLDDVYERLGNLPFAAEF 424
Query: 460 KYDGERAQIHYLEDGSVEI----YSRNAERNTGKFPDVVLAVSRL--KKPSVRSFVLDCE 513
KYDG+RAQ+H +D + +I +SR+ E T K+PD+ + V + P SF++D E
Sbjct: 425 KYDGQRAQVHAWKDATGQIFFKLFSRHLEDMTDKYPDIKVLVQHVFASSPETASFIIDGE 484
Query: 514 IVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREH 573
IVA D + + FQ LS RARK V L ++ + VC++AFD++Y +G+ LL+ R RR+
Sbjct: 485 IVAVDAKDGSLKSFQELSNRARKAVELHEVTITVCLFAFDLMYLDGKTLLEVPFRQRRQM 544
Query: 574 LYDSFE----EEPGFFQF------ATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRD- 622
L F + PG +F + + D + +++F AV++ CEGL+IK +D
Sbjct: 545 LRSRFPPIALDRPGAARFDHVESVECSGSDADKEAVEEFWIRAVESRCEGLMIKVLDSGE 604
Query: 623 ------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
ATYEP KR+ WLKLKKDY+ +GDS DLVP+ +HG G++T
Sbjct: 605 IVEVSGPRSEKTRRKPLPATYEPDKRTSAWLKLKKDYVTGLGDSFDLVPVGTWHGIGRKT 664
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
+ LLA D ++ ++CK +GFS+ ++
Sbjct: 665 AWWSPVLLALRDPDSGAMVALCKCMSGFSDGFYKQ 699
>gi|432093391|gb|ELK25477.1| DNA ligase 1 [Myotis davidii]
Length = 838
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 172/435 (39%), Positives = 248/435 (57%), Gaps = 68/435 (15%)
Query: 212 ITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES 271
+ + + N+LR+V+ +P DL+P++YL+ N + P +GLELG+GD ++KA+A+A GR
Sbjct: 303 MVETLSNLLRSVVALSPPDLLPILYLSLNCLGPPQQGLELGVGDGVLLKAVAQATGRQLE 362
Query: 272 HVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRI 331
V+ + E GD+GLVA+ SRS+Q +M P LT + V FR IA+ G S +K + I
Sbjct: 363 LVRAEAAETGDVGLVAENSRSTQRLMLPPPALTASGVLAKFRDIARLTGSASTARKMDII 422
Query: 332 KALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI------- 384
K L VA E +++ R L +LR+GLAEQ++LAAL QA + PP +
Sbjct: 423 KGLFVACRHSEARFITRALSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPPAVVDAGKGK 482
Query: 385 -----QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKP 439
++ LEE I+KQ F +P ++IVP LL G+ L C +PG+P+ PMLA P
Sbjct: 483 TAEARKTWLEEQGMILKQTFCQVPDLDRIVPVLLEHGLEGLPEHCKLSPGVPLKPMLAHP 542
Query: 440 TKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSR 499
T+GVSE++ +F + FTCEYKYDG+RAQI
Sbjct: 543 TRGVSEVLKRFDEAAFTCEYKYDGQRAQI------------------------------- 571
Query: 500 LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK----------------------- 536
K PSV SF+LD E VA+DREK++I PFQ L+TR RK
Sbjct: 572 -KLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNG 630
Query: 537 -NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
V ++I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G F FAT+L + D
Sbjct: 631 EEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKD 690
Query: 596 LDEIQKFLDAAVDAS 610
+D+I +FL+ D S
Sbjct: 691 MDQIAEFLEQCADLS 705
>gi|396483568|ref|XP_003841737.1| similar to DNA ligase I [Leptosphaeria maculans JN3]
gi|312218312|emb|CBX98258.1| similar to DNA ligase I [Leptosphaeria maculans JN3]
Length = 895
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 179/455 (39%), Positives = 260/455 (57%), Gaps = 26/455 (5%)
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE 247
G + L+ F ++++ RI I D + N+LRT+ME P L+P V+LA N I+P +
Sbjct: 183 GGHATYALLTRCFVLVNSTASRIKIVDTLVNLLRTIMEGDPSSLLPAVWLATNAISPPYI 242
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTIT 306
LELG+G ++I KAL + CG + +K Y + GD G VA ++ QS +RKP PLTI
Sbjct: 243 DLELGLGGSAISKALKKVCGLDTAGLKTLYNKYGDAGDVAFEAKKKQSFTLRKPKPLTIK 302
Query: 307 KVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLA 365
VF++ IA G S E K+ ++ L+ A E +Y++R L LRIG + T+L
Sbjct: 303 SVFESLVKIANSKGHGSVEAKQRIVERLVQDARGAEESRYIVRTLVQHLRIGAVKTTMLI 362
Query: 366 ALGQAAVYNEQHSKPP--------PNIQSPLEEAA---------KIVKQVFSVLPVYEKI 408
AL +A + S+PP P + L++ A +IVK F+ P Y +
Sbjct: 363 ALSRAFML----SRPPGADFEIRDPKALARLKKEALADMYSKNEEIVKACFARRPNYNDL 418
Query: 409 VPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQ 467
+PALL GV + L C IP+ PML T+ + E+ K Q EF CEYKYDG+RAQ
Sbjct: 419 IPALLEIGVCDELLLRCGLALHIPLRPMLGSITRDMGEMFTKLQGREFACEYKYDGQRAQ 478
Query: 468 IHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
+H E G V I+SR+ E T K+PD+V V +++ V SF+L+ E+VA DRE + F
Sbjct: 479 VHCDEKGKVTIFSRHLEVMTDKYPDLVALVPKIRGEGVSSFILEGEVVAVDRETGDLKTF 538
Query: 528 QTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
QTL+ RARK+V + + +DVC++AFD++Y NG+ LL R RR L F E P F +
Sbjct: 539 QTLANRARKDVLIGAVTIDVCLFAFDLMYLNGEELLDRPFRERRSLLKSLFVEIPHHFTW 598
Query: 588 ATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMD 620
L TS D+D +Q F +A+D CEG+++K +D
Sbjct: 599 VRCLDATSADVDAVQAFFQSALDIKCEGIMVKVLD 633
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 16/121 (13%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+TYEP KR +WLK+KKDY + ++LD++PIAAFHG G+++ + LLA ++ +
Sbjct: 699 STYEPDKRLDSWLKVKKDY-STTSETLDVIPIAAFHGSGRKSAWWSPILLAVRNAESGHL 757
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIP-----------KPRPYYRFADTISPDVWFEPT 731
Q++ K +GF++A + R++ P KP +PDVWFEP
Sbjct: 758 QALTKCMSGFTDAFYKAN----RARYNPQDPECAHVRTEKPAFVEYGGGAGTPDVWFEPG 813
Query: 732 E 732
E
Sbjct: 814 E 814
>gi|403414778|emb|CCM01478.1| predicted protein [Fibroporia radiculosa]
Length = 913
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 194/578 (33%), Positives = 291/578 (50%), Gaps = 79/578 (13%)
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE 247
G +P+ FL+ +S RI I +I+ N LRT+ P L+P +YL +N ++P +
Sbjct: 186 GSPIPYSFLAHTLSSLSGTRSRITIINILTNALRTITGQHPPSLLPALYLLSNSLSPPYS 245
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITK 307
+ELG+G + I KA+ G T + +++ Y GD G VA ++S+ + PL +
Sbjct: 246 PIELGLGPSIISKAVQHVSGLTSTALRRLYNSTGDPGDVAYEAKSNVRTLIPHPPLHVPD 305
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
V+D IA G+ + +K+ ++ LLVAA E ++L+R L LR+G +LL AL
Sbjct: 306 VYDALLQIALARGQGAANQKQKIVEKLLVAAKGEEIRFLVRTLSQNLRVGAVRTSLLTAL 365
Query: 368 GQAAVYNEQHSKPPPNIQSPL--------------------------------------- 388
+A V PP I P+
Sbjct: 366 SRAMVLT-----PPGTITVPIPSDSRFFVSPKHLAQIQPVSQQPSKKVLDPARDALNTIF 420
Query: 389 EEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVN 448
A ++K+V+ P Y+ I ALL G+ +L+ + T GIP+ P L PT+ + EI +
Sbjct: 421 TNAEALLKRVYVQHPNYDDITKALLEGGLDHLAESSPLTVGIPLLPTLGSPTRSLDEIYD 480
Query: 449 KFQDMEFTCEYKYDGERAQIHYLEDGS----VEIYSRNAERNTGKFPDVVLAVSRL--KK 502
+ + F+ E+KYDG+RAQIH D S V+++SR+ E T K+PD+V V+ +
Sbjct: 481 RLGLLSFSAEFKYDGQRAQIHASRDNSQQPAVKVFSRHLEDMTDKYPDIVSLVTDIFAIS 540
Query: 503 PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPL 562
P SF++D EIVA D I FQ LS RARK+V DIK+ VC++ FD++Y +GQ L
Sbjct: 541 PRTTSFIIDAEIVAIDPADGSIKSFQELSNRARKDVRSEDIKITVCVFVFDLMYLDGQVL 600
Query: 563 LQEQLRVRREHL------YDSFEEEPGFFQFATTLTSIDLDE-IQKFLDAAVDASCEGLI 615
L++ R RR L Y S +E + S E I+ F A+ + CEGL+
Sbjct: 601 LEKPFRERRALLRSHFPPYTSKRKEVARLDHVRSCESEGGREAIEDFWRTALSSQCEGLM 660
Query: 616 IKTMD----------------------RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
IK D ATYEP +R+ WLKLKKDY+ +GDSLDLVP
Sbjct: 661 IKASDVLLDSGDVLEDVDQKGKSRHKPLPATYEPDRRTSAWLKLKKDYVIGLGDSLDLVP 720
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTG 691
I A+HG G++ + LLA +D + + ++CK +G
Sbjct: 721 IGAWHGNGRKAQWWSPILLAVWDPVDGKLVAMCKCMSG 758
>gi|336269196|ref|XP_003349359.1| hypothetical protein SMAC_06054 [Sordaria macrospora k-hell]
gi|380089146|emb|CCC12912.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 918
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 192/523 (36%), Positives = 294/523 (56%), Gaps = 37/523 (7%)
Query: 131 IDSEKESQP----TPPSPKKRKV-NVNSVSAKEKIAELKSNIVLLKKKAGEFDP-----K 180
++ KE++P +PP + K N S+S+ + S + L K FDP +
Sbjct: 108 VEPTKEAKPHTLTSPPKANQLKGKNTLSLSSAAATEDQTSASIPLDKSPLTFDPTKYIPQ 167
Query: 181 MVACW-EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAA 239
+ W G + L+ F ++S+ + RI I D + N +R ++E P L+P V+LA
Sbjct: 168 LQESWANDGGDASYALLTRCFLLVSSTSSRIKIVDTLVNCIRLLIEGDPSSLLPAVWLAT 227
Query: 240 NKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MR 298
N I+P + +ELG+G ++I KAL + CG +K Y ++GD G VA ++ QS +R
Sbjct: 228 NAISPPYVSMELGLGGSAISKALKQVCGLDNRSLKTLYDKLGDPGDVAFEAKKKQSFTLR 287
Query: 299 KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIG 357
KP PLTI VF + I+K G+ S + K+ + LL A E +Y++R L LRIG
Sbjct: 288 KPKPLTIKGVFRSLVKISKTQGQGSGDVKQRIVDKLLQDARGGEESRYVVRTLCQHLRIG 347
Query: 358 LAEQTLLAALGQAAVYNEQHSKPP--------PNIQSPLEE---------AAKIVKQVFS 400
+ T+L AL +A + SKPP P+ + L++ A +IVK F+
Sbjct: 348 AVKTTMLIALARAFLL----SKPPGTDFPTKDPSQLAKLKKEELAEVYLKAEEIVKASFA 403
Query: 401 VLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
P Y +VP LL GV L C T IP+ PML T+ +SE++ + + +F CEY
Sbjct: 404 RHPDYNDLVPVLLEIGVCEELLVRCGLTLHIPLRPMLGGITRDLSEMLTRLRGRDFACEY 463
Query: 460 KYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR 519
KYDG+RAQIH E G V I+SR+ E T K+PD+V V +++ V+SF+++ E+VA DR
Sbjct: 464 KYDGQRAQIHCDEKGVVSIFSRHLELMTDKYPDLVTLVPKIRGEDVQSFIMEGEVVAVDR 523
Query: 520 EKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFE 579
++ FQTL+ RARK+V++ I +DVC++AFD++Y NGQPLL R RR+ L F
Sbjct: 524 ATGELKNFQTLTNRARKDVAIGSITIDVCLFAFDLMYLNGQPLLNRSFRERRDMLRSLFV 583
Query: 580 EEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMD 620
E P F + ++ TS D + + +F +AVD+ CEG+++K +D
Sbjct: 584 EIPHHFTWVKSIDATSQDSETVLEFFKSAVDSKCEGIMVKILD 626
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 13/123 (10%)
Query: 623 ATYEPSKRSLNWLKLKKDYIES---IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNN 679
ATYEP KR +WLK+KKDYI + D+LDL+PIAA+HG G++ + LLA +
Sbjct: 704 ATYEPDKRLDSWLKVKKDYIGTSAGFSDTLDLLPIAAWHGSGRKAKWWSPILLAVRNEET 763
Query: 680 EEFQSICKIGTGFSEAMLE------ERSSSLRSKVIPK----PRPYYRFADTISPDVWFE 729
+++CK +GF++A + ++ S P +P + +PDVWFE
Sbjct: 764 GSLEAVCKCMSGFTDAFYKANREFYDKDGSFSPDNEPNNVHATKPGFVEYAGGNPDVWFE 823
Query: 730 PTE 732
P E
Sbjct: 824 PQE 826
>gi|261190020|ref|XP_002621420.1| DNA ligase Cdc9 [Ajellomyces dermatitidis SLH14081]
gi|239591248|gb|EEQ73829.1| DNA ligase Cdc9 [Ajellomyces dermatitidis SLH14081]
Length = 903
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 153/306 (50%), Positives = 201/306 (65%), Gaps = 21/306 (6%)
Query: 446 IVNKFQDMEFTCEYKYDGERAQIHYLE------------------DGSVEIYSRNAERNT 487
I+ + FTCEYKYDGERAQIHY+ +G I+SRN+E +
Sbjct: 508 IIRFLEGKNFTCEYKYDGERAQIHYVAREEIHKYASTASTLQKDGEGVCAIFSRNSEDLS 567
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV 547
K+PD++ + K SFVLDCE VA+D +K+LPFQ L TR RK+V D+KV V
Sbjct: 568 KKYPDILGKLESWVKKGTTSFVLDCETVAWDMVNKKVLPFQQLMTRKRKDVKAEDVKVKV 627
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
C++AFD+L+ NGQ ++ LR RR L+++F G F FA + DLDEIQ LD +V
Sbjct: 628 CVFAFDLLFLNGQATVKMTLRERRALLHEAFTPIEGEFVFAQHGDTNDLDEIQTLLDESV 687
Query: 608 DASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
ASCEGL++K +D ++ YEPSKRS NWLK+KKDY+ IGDSLDLV + A++GRGKRT V
Sbjct: 688 KASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYYGRGKRTSV 747
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISP 724
YGAFLLA Y+ N + F+++C IGTGFSEA+LEE +L VI +P+P+Y + P
Sbjct: 748 YGAFLLAAYNPNTQNFETVCNIGTGFSEALLEELHKALSPLVIDRPKPFYDHSSVPKDQP 807
Query: 725 DVWFEP 730
DVWFEP
Sbjct: 808 DVWFEP 813
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 104/182 (57%), Gaps = 2/182 (1%)
Query: 157 KEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIV 216
K KIA+ K +V K DP W+ G VP+ L F +I T R++I
Sbjct: 302 KPKIAQKKREMVQHALKDSGKDP--YPDWKPGAPVPYAALCTTFSLIEMTTKRLIILSHC 359
Query: 217 CNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQ 276
LR V+ TP DL+P V L NK+A + G+ELGIG++ I+KA+ E+ GR+ + +K
Sbjct: 360 SLFLRQVLRLTPNDLLPTVQLMLNKLAADYAGIELGIGESFIMKAIGESTGRSLAVIKAD 419
Query: 277 YQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLV 336
E+GDLGLVA SRS+Q M KP PLT+ V + IAK G SQEKK + IK LL
Sbjct: 420 QHEIGDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLLAIAKTQGHGSQEKKISAIKKLLS 479
Query: 337 AA 338
+A
Sbjct: 480 SA 481
>gi|239606310|gb|EEQ83297.1| DNA ligase Cdc9 [Ajellomyces dermatitidis ER-3]
Length = 900
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 153/306 (50%), Positives = 201/306 (65%), Gaps = 21/306 (6%)
Query: 446 IVNKFQDMEFTCEYKYDGERAQIHYLE------------------DGSVEIYSRNAERNT 487
I+ + FTCEYKYDGERAQIHY+ +G I+SRN+E +
Sbjct: 505 IIRFLEGKNFTCEYKYDGERAQIHYVAREEIHKYASTASTLQKDGEGICAIFSRNSEDLS 564
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV 547
K+PD++ + K SFVLDCE VA+D +K+LPFQ L TR RK+V D+KV V
Sbjct: 565 KKYPDILGKLESWVKKGTTSFVLDCETVAWDMVNKKVLPFQQLMTRKRKDVKAEDVKVKV 624
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
C++AFD+L+ NGQ ++ LR RR L+++F G F FA + DLDEIQ LD +V
Sbjct: 625 CVFAFDLLFLNGQATVKMTLRERRALLHEAFTPIEGEFVFAQHGDTNDLDEIQTLLDESV 684
Query: 608 DASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
ASCEGL++K +D ++ YEPSKRS NWLK+KKDY+ IGDSLDLV + A++GRGKRT V
Sbjct: 685 KASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYYGRGKRTSV 744
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISP 724
YGAFLLA Y+ N + F+++C IGTGFSEA+LEE +L VI +P+P+Y + P
Sbjct: 745 YGAFLLAAYNPNTQNFETVCNIGTGFSEALLEELHKALSPLVIDRPKPFYDHSSVPKDQP 804
Query: 725 DVWFEP 730
DVWFEP
Sbjct: 805 DVWFEP 810
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 104/182 (57%), Gaps = 2/182 (1%)
Query: 157 KEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIV 216
K KIA+ K +V K DP W+ G VP+ L F +I T R++I
Sbjct: 299 KPKIAQKKREMVQHALKDSGKDP--YPDWKPGAPVPYAALCTTFSLIEMTTKRLIILSHC 356
Query: 217 CNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQ 276
LR V+ TP DL+P V L NK+A + G+ELGIG++ I+KA+ E+ GR+ + +K
Sbjct: 357 SLFLRQVLRLTPNDLLPTVQLMLNKLAADYAGIELGIGESFIMKAIGESTGRSLAVIKAD 416
Query: 277 YQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLV 336
E+GDLGLVA SRS+Q M KP PLT+ V + IAK G SQEKK + IK LL
Sbjct: 417 QHEIGDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLLAIAKTQGHGSQEKKISAIKKLLS 476
Query: 337 AA 338
+A
Sbjct: 477 SA 478
>gi|221482854|gb|EEE21185.1| DNA ligase 1 precursor, putative [Toxoplasma gondii GT1]
Length = 1119
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 154/363 (42%), Positives = 224/363 (61%), Gaps = 4/363 (1%)
Query: 384 IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG-VWNLSNTCSFTPGIPIGPMLAKPTKG 442
++S L + V++ +P E +V LL LS+ C TPGIP+ PMLA+PT+G
Sbjct: 676 LESHLSRMEQSVRRALCEVPNVEVVVGHLLQGADAEALSSLCVATPGIPLQPMLARPTRG 735
Query: 443 VSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKK 502
E++ + + EFTCE+KYDGER Q+H + V ++SRN E T K+PDV+ +
Sbjct: 736 FEEVMERLKQTEFTCEFKYDGERIQLHLISPTRVRLFSRNLEEITQKYPDVIDMFLASLQ 795
Query: 503 PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPL 562
P+ +LD E+VAYD E + ILPFQTL+ R RK V I+V V ++ FD + NG+ L
Sbjct: 796 PTTEECILDGEVVAYDEENRTILPFQTLTRRKRKGVEKDGIEVRVALFLFDCMRLNGECL 855
Query: 563 LQEQLRVRREHLYDS--FEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD 620
L + L RR+ + + FE P Q AT + + FL A++ +CEGL++KT+
Sbjct: 856 LGKTLEARRDKMRQAIDFERSP-LVQQATYKDIRGAQDFEDFLTEAIEGNCEGLMVKTLR 914
Query: 621 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNE 680
+ATYEPSKRSLNWLK+KKDY++ + DS+DLVPI A +G+GKR+G +G +LLA Y+ +E
Sbjct: 915 ENATYEPSKRSLNWLKVKKDYVDGLTDSVDLVPIGACYGKGKRSGTFGTYLLAVYNPADE 974
Query: 681 EFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSP 740
FQ++CK TGFSE L++ +L ++I +PYY + + DVWFE + E +
Sbjct: 975 TFQTVCKAATGFSEEALQQHHKALSDRIISHKKPYYDVSPKLEADVWFEACQVWECRAAD 1034
Query: 741 ASI 743
SI
Sbjct: 1035 LSI 1037
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 17/202 (8%)
Query: 192 PFIFLSLV--FDMI---------SNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAAN 240
P +F +LV FD I SN+ +++T N+ R ++ P+ L +Y+ N
Sbjct: 412 PILFEALVNAFDKIEQMKASGTGSNKKQTVVLT----NLFRLLLFYAPKTLHKAIYICLN 467
Query: 241 KIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
K+AP + G E+G+G++ I++A+AE GRTE+H+KK+ Q + DLG +A+ S + P
Sbjct: 468 KVAPDYLGQEVGVGESLILRAMAETYGRTEAHLKKELQHIEDLGKIAEQSSCKTRTLFPP 527
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
LTI VFD + I++ AGKDSQ K+ +K LLV EP+Y+IR LQ ++R G +
Sbjct: 528 PRLTIDGVFDQVKAISQCAGKDSQVHKRELLKRLLVGGKGSEPKYIIRFLQQRMRTGAST 587
Query: 361 QTLLAALGQAA--VYNEQHSKP 380
T+ AL A +N ++ +P
Sbjct: 588 ATVYQALAFACFLTHNARNGRP 609
>gi|452978409|gb|EME78173.1| hypothetical protein MYCFIDRAFT_168670 [Pseudocercospora fijiensis
CIRAD86]
Length = 885
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 280/507 (55%), Gaps = 41/507 (8%)
Query: 145 KKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVP------FIFLSL 198
KK +++ S +A+E S+ + + FDP+ K + P + L+
Sbjct: 128 KKNTLSLQSATAEEDTV---SHDIPFDESPLTFDPQTYIPDLKKQWAPEAGNSTYALLTH 184
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
F ++++ RI I D + N+LRT++E P+ L+P V+LA N IAP + +ELG+G ++I
Sbjct: 185 CFVLVNSTQSRIKIVDTLVNLLRTLIEGDPDSLLPAVWLATNSIAPPYVDIELGLGGSAI 244
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAK 317
KAL + CG S +K Y + GD G VA ++ QS +RKP PLTI V+D+ R IA
Sbjct: 245 SKALKKVCGLDNSSLKTLYNKHGDAGDVAFEAKKKQSFTLRKPKPLTIKGVYDSLRKIAD 304
Query: 318 EAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
G SQE K+ ++ L+ A E +Y++R L LRIG + T+L AL +A +
Sbjct: 305 AKGNGSQEVKQRIVERLVQDARGAEESRYIVRTLVQHLRIGAVKTTMLIALSRAFLL--- 361
Query: 377 HSKPP--------------------PNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
SKPP + SP EE +VK F+ P Y +VP LL G
Sbjct: 362 -SKPPSADYATKAAVDLRKLSKQELAEVWSPAEE---LVKACFARRPNYNDLVPTLLEVG 417
Query: 417 V-WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS 475
+ L C IP+ PML T+ + E++ + Q +F+CE+KYDG+RAQ+H +G
Sbjct: 418 IDQELLVRCGLAMHIPLRPMLGGITRDLGEMLTRLQGRDFSCEFKYDGQRAQVHCDANGK 477
Query: 476 VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
V I+SR+ E T K+PD+V V +++ SV SF+L+ E+VA DRE + PFQ L+ RAR
Sbjct: 478 VTIFSRHLEVMTEKYPDLVALVPKIRGESVSSFILEGEVVAVDRETGDLKPFQILANRAR 537
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TS 593
K+V + + VDVC++AFD++Y NG+ LL R RR L F E P F + ++ TS
Sbjct: 538 KDVVIQSVTVDVCLFAFDLMYLNGEELLDRPFRERRSLLRSLFVEIPNHFTWVKSMDATS 597
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMD 620
D + + F A+D CEG+++K +D
Sbjct: 598 EDGEAVSDFFKQAIDIKCEGIMVKVLD 624
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+TYEP KR +WLK+KKDY + D++DL+P+ A+HG+G++ + LLAC + N
Sbjct: 685 STYEPDKRLDSWLKVKKDY-NTQTDTIDLIPVGAWHGQGRKNAWWSPILLACRNPENGTL 743
Query: 683 QSICKIGTGFSEAM-----------LEERSSSLRSKVIPKPRP-YYRFADTISPDVWFEP 730
+ + K +GF++A E+ L K RP Y +A T PDVWFEP
Sbjct: 744 EVVTKCISGFTDAFYKANRARYDPDFEDEDGVLVGKNTLSERPSYVEYAGT--PDVWFEP 801
Query: 731 TE 732
E
Sbjct: 802 QE 803
>gi|358394376|gb|EHK43769.1| hypothetical protein TRIATDRAFT_79026 [Trichoderma atroviride IMI
206040]
Length = 880
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 210/611 (34%), Positives = 326/611 (53%), Gaps = 39/611 (6%)
Query: 34 HHLFQKPKPLSSSLNPRRKMSSSAPNAFQVLMSAAAKKKPSPQPNSSSSSSSPKKRRTLD 93
+ F K K S SL ++ +A +L +K + + ++ P R + +
Sbjct: 25 EYFFSKQKQ-SGSLTTSAGEDGASNSASALLTDEELARKLQAEWDQEIANEVPAIRGSQN 83
Query: 94 TQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNS 153
+ TPKT + E I E A+ S P S P++S E+ P KK ++
Sbjct: 84 S-TPKTEGT---EAIAETADSDST----PASTS--RPVESTAETTPKKQDTKKTLALQST 133
Query: 154 VSAKEKIAELKSNIVLLKKKAGEFDP-----KMVACWE-KGERVPFIFLSLVFDMISNET 207
A + I E + L + FDP ++ W +G + LS F ++S T
Sbjct: 134 GMADDLITE----SIPLDESPLIFDPSKYIKELQEYWAAEGGNASYALLSRCFVLVSGTT 189
Query: 208 GRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG 267
RI I D + N LR ++E+ P L+P V+LA N I+P + +ELGIG ++I KAL + CG
Sbjct: 190 SRIKIVDTLVNCLRILIESDPSSLLPAVWLATNSISPPYISMELGIGGSAISKALRQVCG 249
Query: 268 RTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEK 326
+K Y + GD G VA ++ QS +RKP PLTI V+ + IA G S E
Sbjct: 250 LDNRSLKAIYDKYGDPGDVAFEAKKKQSFTLRKPKPLTIKGVYQSLVKIATTHGHGSGET 309
Query: 327 KKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE----QHSKPP 381
K+ + LL A E ++++R + LRIG + T+L AL +A + ++ ++S
Sbjct: 310 KQRIVDRLLQDARGGEESRFIVRTVSQYLRIGAVKTTMLIALSRAFLLSQAPGSEYSTRD 369
Query: 382 PNIQSPLEE---------AAKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIP 431
+ S L++ AA+IVK ++ P Y ++PALL GV L C +P
Sbjct: 370 ISELSKLKKEELAEVWNKAAEIVKASYARHPNYNDLIPALLEVGVCEELLLRCGLKLHVP 429
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFP 491
+ PML T+ +SE++ K Q +F CE+KYDG+RAQ+H E G V I+SR+ E T K+P
Sbjct: 430 LRPMLGSITRDLSEMLTKLQGRDFACEFKYDGQRAQVHCDEKGKVSIFSRHLELMTEKYP 489
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYA 551
D+V V +++ + SF+++ E+VA DRE ++ FQTL+ RARK+V++ DIK+DVC++A
Sbjct: 490 DLVELVPKIRGEGIGSFIMEGEVVAVDRETGELKNFQTLTNRARKDVAIGDIKIDVCLFA 549
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDA 609
FD++Y NGQ LL R RRE L F E P F + +L TS D + + +F +A++
Sbjct: 550 FDLMYLNGQSLLDRPFRERRELLRSLFIEVPHHFTWVKSLDATSGDSETVLEFFKSALEN 609
Query: 610 SCEGLIIKTMD 620
CEG+++K +D
Sbjct: 610 KCEGIMVKILD 620
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 16/121 (13%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
ATYEP KR +WLK+KKDY + D+LD++P+A +HG+G++ + L+A + +
Sbjct: 679 ATYEPDKRLDSWLKVKKDYNSNF-DTLDMIPVAGWHGQGRKAKWWSPILMAVRNEESGTL 737
Query: 683 QSICKIGTGFSEAMLE---------ERSSSLRSKVIPKPR--PYYRFADTISPDVWFEPT 731
+ +CK +GF++ + E S ++ + KP YY SPDVWFEP
Sbjct: 738 EVVCKCISGFTDTFYKANKEFYDNGEESGEPKNTKLQKPSFIEYY----GPSPDVWFEPQ 793
Query: 732 E 732
E
Sbjct: 794 E 794
>gi|340518669|gb|EGR48909.1| predicted protein [Trichoderma reesei QM6a]
Length = 881
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 207/615 (33%), Positives = 315/615 (51%), Gaps = 45/615 (7%)
Query: 47 LNPRRKMSSSAPNAFQVLMSAAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGE 106
LN +K ++ + S K+K PN S+ + + + E
Sbjct: 10 LNSGKKQPAAQSKGLEYFFS---KQKQPESPNPSTGEDGAPSSSSALLSDEELARKLQAE 66
Query: 107 KIQEVAEE-----------PSNDLVKPISNQIDNPIDSEKESQPTPPSP-----KKRKVN 150
QEVA P + V IS D S P PP+ K+
Sbjct: 67 WNQEVASHRQTPSEGQSSTPKDSDVGAISKTEDGDSTPASVSNPEPPTADAALRKQDNRK 126
Query: 151 VNSVSAKEKIAELKSNIVLLKKKAGEFDPK-----MVACW--EKGERVPFIFLSLVFDMI 203
S+ + + + +N + L + F+P + CW EKG+ + L+ F ++
Sbjct: 127 TLSLQSTGMVDDAVTNSIPLDESPLTFEPSKYVKLLQECWAAEKGD-ATYALLTRCFVLV 185
Query: 204 SNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALA 263
S T RI I D + N LR ++E P L+P V+LA N I+P + +ELG+G ++I KAL
Sbjct: 186 SATTSRIKIVDTLVNCLRILIEGDPSSLLPAVWLATNSISPPYISMELGLGGSAISKALR 245
Query: 264 EACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKD 322
+ CG +K Y + GD G VA ++ QS +RKP PLTI V+ IA G+
Sbjct: 246 QVCGLDNRSLKAIYDKYGDPGDVAFEAKKKQSFTLRKPKPLTIKGVYQALVKIATTHGQG 305
Query: 323 SQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQA-----AVYNEQ 376
S E K+ + LL A E ++++R + LRIG + T+L AL +A A +E
Sbjct: 306 SGEAKQRIVDRLLQDARGGEESRFIVRTVSQYLRIGAVKTTMLIALSRAFLLSKAPGSEY 365
Query: 377 HSKPPPNIQSPLEE--------AAKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTCSFT 427
+K ++ +E A +IVK F+ P Y ++PALL GV L C T
Sbjct: 366 STKDVGELRKLKKEELADVWGKAEEIVKASFARHPNYNDLIPALLEIGVCEELLLRCGLT 425
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNT 487
IP+ PML T+ +SE++ K Q +F CE+KYDG+RAQ+H + G V I+SR+ E T
Sbjct: 426 LHIPLRPMLGSITRDLSEMLTKLQGRDFACEFKYDGQRAQVHCDDKGKVSIFSRHLELMT 485
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV 547
K+PD+V V +++ + SF+++ E+VA DRE ++ FQTL+ RARK+V++ DIK+DV
Sbjct: 486 EKYPDLVDLVPKIRGEGIGSFIMEGEVVALDRETGELKNFQTLTNRARKDVAIGDIKIDV 545
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDA 605
C++AFD++Y NGQ LL R RRE L F E P F + +L TS D + + F +
Sbjct: 546 CLFAFDLMYLNGQSLLNRPFRERRELLRSLFTEVPHHFTWVKSLDATSGDSEAVLDFFKS 605
Query: 606 AVDASCEGLIIKTMD 620
A++ CEG+++K +D
Sbjct: 606 ALENKCEGIMVKILD 620
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 8/117 (6%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
ATYEP KR +WLK+KKDY S D+LD++P+A +HG+G++ + L+A + +
Sbjct: 682 ATYEPDKRLDSWLKVKKDYNSSF-DTLDMIPVAGWHGQGRKAKWWSPILMAVRNEESGML 740
Query: 683 QSICKIGTGFSE-------AMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
+ +CK +GF++ A ++ S K +P + +PDVWFEP E
Sbjct: 741 EVVCKCISGFTDSFYKANKAFYDDGEESGEPKNTKLQKPSFIEYHGPAPDVWFEPQE 797
>gi|328860573|gb|EGG09678.1| hypothetical protein MELLADRAFT_34116 [Melampsora larici-populina
98AG31]
Length = 695
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 208/646 (32%), Positives = 324/646 (50%), Gaps = 98/646 (15%)
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHE 247
++VP+ FL+ F IS R+ IT I+ N+LRT++E P L+P VYL PA+E
Sbjct: 5 AKKVPYSFLAEGFVSISATRSRLSITTILTNLLRTIIEHDPSSLLPTVYLITGHFGPAYE 64
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-KASRSSQSMMRKPDPLTIT 306
G+ELGIG + KA+ + +K + + GD G VA + RS +++ + LT+
Sbjct: 65 GIELGIGSQILTKAIRAVSDVSHKELKALWNKHGDPGDVAFETRRSVRTLFSRTAQLTVQ 124
Query: 307 KVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAA 366
VFD ++ G S + K +K L+V+A E ++L+R++ LRIG + T+ ++
Sbjct: 125 SVFDDLYNLSHLKGPGSVDTKVEVVKKLIVSAKGEEVRFLVRIMCRNLRIGAVKLTVTSS 184
Query: 367 LGQAAVYNEQ-----------HSKPPPNIQS--PLEEAAKIVKQVFSVLPVYEKIVPALL 413
L QA + + P +++ L +A KIV++V+ P Y+ I+PALL
Sbjct: 185 LAQAFCLSRSSTTSSQNSSSIETNKPGRLETLKILTQAQKIVREVYVRHPNYDSIIPALL 244
Query: 414 TDG-VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ-DMEFTCEYKYDGERAQIHYL 471
+G + LS GIPI PML + T+ +S++ + + D EF E+KYDG+R QIH
Sbjct: 245 DEGSLETLSEKVPLAVGIPISPMLGQITRDLSDVEQRLKADEEFVAEWKYDGQRVQIHAK 304
Query: 472 EDGSVEIYSRNAERNTGKFPDV---VLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQ 528
D V ++SR+ E T K+PDV V+A+ K S + I A D ++ FQ
Sbjct: 305 RDIFVRLFSRHLEDMTDKYPDVLDLVVALFERGKASESHEI----ICAIDPVTGQLKSFQ 360
Query: 529 TLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF---- 584
+L+ R+RK+V + D+ + V I+AFD++Y NG+PLL E R RR L D P F
Sbjct: 361 SLANRSRKDVKIEDVDIQVGIFAFDLMYLNGKPLLAEAFRKRRSLLKDHL---PPFVPTE 417
Query: 585 ----------FQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIK-----------TMDR 621
F ++ T L E+++F+ AV CEG+++K MD+
Sbjct: 418 GSTRCNLIARFDHVNSMESTVTKLQEVREFMLEAVANKCEGIMVKILDSQTSPSSMVMDQ 477
Query: 622 D----------------------------------------ATYEPSKRSLNWLKLKKDY 641
D A+YEP KR+ +WLK+KKDY
Sbjct: 478 DVDGNMEVSGSEEEDRMVGQDDQANLDSTVGAKRSRKKALLASYEPDKRADSWLKVKKDY 537
Query: 642 IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERS 701
E +GDSLDLVPI A+HG+G++ + LLA YD + FQ++CK +GF++ ++
Sbjct: 538 GE-LGDSLDLVPIGAWHGQGRKASFWSPVLLALYDPESGGFQAVCKCISGFNDQFYKDLG 596
Query: 702 SSLRSKV----IPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ K Y + +PDVWF P+E E + ++
Sbjct: 597 ARYTKGTARCSAEKQLGYIESSGGHTPDVWFLPSEVWEIRGADITL 642
>gi|189200479|ref|XP_001936576.1| DNA ligase 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983675|gb|EDU49163.1| DNA ligase 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 796
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/525 (35%), Positives = 291/525 (55%), Gaps = 30/525 (5%)
Query: 125 NQIDN---PIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPK- 180
N +DN P + +E+ P +K +++ S +++E + +NI + EFDP+
Sbjct: 24 NDVDNASLPNRTIQETSKAAPPKQKNTLSLQSTASEEDT--ITANIPF-DQSPLEFDPQD 80
Query: 181 ----MVACW-EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
+ W G + L+ F ++++ T RI I D + N+LRT++E+ P L+P V
Sbjct: 81 YIPDLQKHWVADGGHATYALLTRCFILVNSTTSRIKIVDTLVNLLRTIIESDPGSLLPAV 140
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
+LA N I+P + LELG+G ++I KAL + CG + +K + GD G VA ++ QS
Sbjct: 141 WLATNAISPPYIDLELGLGGSAISKALKKVCGLDNAGLKVLNNKYGDAGDVAFEAKKKQS 200
Query: 296 M-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSK 353
+RKP PLTI VF++ IA G S E K+ ++ L+ A E +Y++R L
Sbjct: 201 FTLRKPKPLTIKSVFESLVKIANSKGHGSVENKQRIVERLVQDARGAEESRYIVRTLVQH 260
Query: 354 LRIGLAEQTLLAALGQA--------AVYNEQHSKPPPNIQSP-----LEEAAKIVKQVFS 400
LRIG + T+L AL +A A + ++ K ++ + +IVK F+
Sbjct: 261 LRIGAVKTTMLIALSRAFMLSKPAGAEFEIRNRKDMAKLKKEELTEIYSKNEEIVKACFA 320
Query: 401 VLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
P Y ++P LL GV L C IP+ PML T+ + E++ K Q +F CEY
Sbjct: 321 RRPNYNDLIPVLLEIGVCEELLVRCGLALHIPLRPMLGSITRDMGEMLTKLQGRDFACEY 380
Query: 460 KYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR 519
KYDG+RAQ+H + G V I+SR+ E T K+PD+V V +++ V SF+L+ E+VA DR
Sbjct: 381 KYDGQRAQVHCDDKGKVTIFSRHLEVMTDKYPDLVALVPKIRGEGVSSFILEGEVVAVDR 440
Query: 520 EKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFE 579
E + FQTL+ RARK+V + + +DVC++AFD++Y NG+ LL R RR L F
Sbjct: 441 ESGDLKTFQTLANRARKDVVIGAVTIDVCLFAFDLMYLNGEELLNRPFRERRSLLRSLFV 500
Query: 580 EEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD 622
E P F + +L TS D++ +Q F +A+D CEG+++K +D +
Sbjct: 501 EIPHHFTWVKSLDATSTDVEAVQSFFQSALDIKCEGIMVKLLDNN 545
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+TYEP KR WLK+KKDY + ++LDL+PIAAFHG G++ + LLA + + +
Sbjct: 601 STYEPDKRLDAWLKVKKDYNTTTSETLDLIPIAAFHGSGRKASWWSPILLAIRNGESGQL 660
Query: 683 QSICKIGTGFSEAMLEERSSSLR------SKVIPKPRPYYRF-ADTISPDVWFEPTERPE 735
+++ K +GF++A + + + V+P+ Y + P VWFEP E E
Sbjct: 661 EAVTKCMSGFTDAFYKANRAKYNPDDADCTAVLPRKPSYVSYNGGAGEPAVWFEPQEVWE 720
Query: 736 TS 737
+
Sbjct: 721 VA 722
>gi|452837927|gb|EME39868.1| hypothetical protein DOTSEDRAFT_74682 [Dothistroma septosporum
NZE10]
Length = 899
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 190/543 (34%), Positives = 296/543 (54%), Gaps = 40/543 (7%)
Query: 111 VAEEPSNDLVKPISNQIDNPIDSEKESQPTPPSP---------KKRKVNVNSVSAKEKIA 161
VA+E ND + + P DS P P+P KK +++ S +A +
Sbjct: 105 VAKEDLND----VEDSSIEPADSAHPGAPADPAPVTNAFTAFGKKSTLSLQSATADD--- 157
Query: 162 ELKSNIVLLKKKAGEFDPK-----MVACWE-KGERVPFIFLSLVFDMISNETGRILITDI 215
+ S+ + + FDP+ + W +G + L+ F ++++ RI I D
Sbjct: 158 DAISHDIPFDESPLTFDPQNYLPELRKQWAAEGGMATYALLTHCFVLVNSTQSRIKIVDT 217
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKK 275
+ N++RT++E P+ L+P V+LA N I+P + +ELG+G ++I KAL + CG S +K
Sbjct: 218 LVNLIRTLIEGDPDSLLPAVWLATNSISPPYIDVELGLGGSAISKALKKVCGLDNSSLKT 277
Query: 276 QYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKAL 334
Y + GD G VA ++ QS+ +RKP PLTI V+++ IA G QE K+ ++ L
Sbjct: 278 LYNKYGDAGDVAFEAKKRQSLTLRKPKPLTIKGVYESLHKIASARGTGCQEVKQRIVERL 337
Query: 335 LVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE-QHSKPPPNIQSPLEEAA 392
+ A E +Y++R L LRIG + T+L AL +A + + Q + Q L + +
Sbjct: 338 VQDARGAEESRYIVRTLVQHLRIGAVKTTMLIALSRAFLLSRPQGADFDTRSQVDLRKLS 397
Query: 393 K------------IVKQVFSVLPVYEKIVPALLTDGV-WNLSNTCSFTPGIPIGPMLAKP 439
K +VK F+ P Y +VP LL G+ L C IP+ PML
Sbjct: 398 KQDLAEVYSHPEELVKASFARRPNYNDLVPTLLGIGISEELVIRCGLAMHIPLRPMLGGI 457
Query: 440 TKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSR 499
T+ + E++ K Q +F+CEYKYDG+RAQ+H E+G V I+SR+ E T K+PD+V V +
Sbjct: 458 TRDLGEMLTKLQGRDFSCEYKYDGQRAQVHCDENGKVTIFSRHLELMTEKYPDLVALVPK 517
Query: 500 LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNG 559
++ V SF+L+ E+VA DRE + PFQ L+ RARK+V + +KVDVC++AFD++Y NG
Sbjct: 518 IRGEGVSSFILEGEVVAVDRESGDLKPFQILANRARKDVVIQSVKVDVCLFAFDLMYLNG 577
Query: 560 QPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIK 617
+ LL R RR L F E P F + ++ TS D + + +F A+D CEG+++K
Sbjct: 578 EELLDRPFRERRSLLKSLFIEIPNTFTWVKSMDATSADGEAVSEFFKGALDIKCEGIMVK 637
Query: 618 TMD 620
+D
Sbjct: 638 VLD 640
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 13/119 (10%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
++YEP KR +WLK+KKDY + D++DL+P+ +HG+G++ + LLAC +
Sbjct: 707 SSYEPDKRLDSWLKVKKDY-NTQTDTIDLIPVGGWHGQGRKNAWWSPVLLACRNPETGSL 765
Query: 683 QSICKIGTGFSEAMLEERSSSLR---------SKVIPKPRPYYRFADTISPDVWFEPTE 732
+ + K +GF++A + + S +I +P Y + P VWFEP E
Sbjct: 766 EVVTKCISGFTDAFYKTNRAKYDPDKGIDEEGSNIISRPS-YVEYGG--EPAVWFEPQE 821
>gi|320167046|gb|EFW43945.1| ATP dependent DNA ligase [Capsaspora owczarzaki ATCC 30864]
Length = 1559
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/527 (34%), Positives = 279/527 (52%), Gaps = 86/527 (16%)
Query: 183 ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKI 242
A E G + PF+ L+ + + TGR+ IT ++ +M R++++ P+DL+P VYL N+
Sbjct: 748 ASLEVGAQTPFLTLARTYSSVEANTGRLTITALLTDMFRSIIDAAPQDLLPAVYLTTNRT 807
Query: 243 APAHE-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD 301
+P++E G E+ IG +++ A++E G + +K +Y+ +GDLG +A+ +R+S ++ P
Sbjct: 808 SPSYEPGDEMSIGGHTMVSAVSEVTGMSLKQIKHEYETLGDLGDIAQKARASMRVLVAPK 867
Query: 302 PLTITKVFDTFRLIAKEAGKDSQE-KKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
PLT++ VF T R IA+ GK KN IK LLV + E +YL+R+ LRIG
Sbjct: 868 PLTVSTVFRTMRQIAEIKGKSWDAFGNKNLIKRLLVCTREEEMRYLVRIFLQHLRIGAVN 927
Query: 361 QTLLAALGQAAVYNEQHSKPPPNIQSPLEE------------------------------ 390
T+L AL A+ + P IQ+ LE
Sbjct: 928 NTVLVALAHASETRTSPLEVP--IQTVLESLARTSAPGLRLEGLHGLVSSLQPTADRSDK 985
Query: 391 -----AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSE 445
AA ++KQ ++ P +E I+ ALL GV ++ TC PGIP+ PML K K ++
Sbjct: 986 DRLAAAAAVLKQCYNQAPNWEIILRALLKGGVALVAQTCRLQPGIPLKPMLGKICKDLAN 1045
Query: 446 IVNKFQDMEFTCEYKYDGERAQIHYLE-----DG--SVEIYSRNAERNTGKFPDVVLAVS 498
++ + +F ++KYDG+R Q H +G V ++SR+ E TG+FPDVV +
Sbjct: 1046 VIAELDGRDFAADFKYDGQRVQAHVWHPRQPSNGPPRVRLFSRHLEDMTGRFPDVVELLI 1105
Query: 499 RLKKPSV-----------RSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV 547
+ SV SF+LD EIVA+ R K+LPFQTLSTRAR++V+ ++++V+V
Sbjct: 1106 GMLSASVAEGLPGDSSRIESFILDAEIVAFQRSTGKVLPFQTLSTRARRDVTTNELEVEV 1165
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF-----------------ATT 590
CI+AFD+++ NGQ LL+ R R L +F E PGFFQF AT
Sbjct: 1166 CIFAFDLMFLNGQSLLRAPFRHRNMLLRTTFAERPGFFQFVPQMLFGPNLQPALATPATV 1225
Query: 591 LTSI------------DLDEIQKFLDAAVDASCEGLIIKTMDRDATY 625
S+ D++ FL A++A+CEGL+IK + T+
Sbjct: 1226 TRSLPDEAAGMSFSEDTRDQLMAFLHDAINATCEGLMIKPLGARGTF 1272
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 27/139 (19%)
Query: 621 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNE 680
R +TYEPSKR NWLK+K+DY+E + +SLDLVPI AF G G++ G + FLLA YD E
Sbjct: 1357 RQSTYEPSKRCSNWLKVKRDYVEGMVESLDLVPIGAFWGNGRKAGWFSPFLLAAYDPETE 1416
Query: 681 EFQSICKIGTGFSEAMLEER---------------------------SSSLRSKVIPKPR 713
++ S+CK +GFS+ +++ S++L ++IPK +
Sbjct: 1417 QYISVCKCMSGFSDEFYKQQLAFYTQTPSHKPEEGDAAEGKESTAGPSTALGPRIIPKAK 1476
Query: 714 PYYRFADTISPDVWFEPTE 732
PYY + + PDVWFEP +
Sbjct: 1477 PYYVVSPQLQPDVWFEPCQ 1495
>gi|58258919|ref|XP_566872.1| DNA ligase [Cryptococcus neoformans var. neoformans JEC21]
gi|134107043|ref|XP_777834.1| hypothetical protein CNBA5310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260532|gb|EAL23187.1| hypothetical protein CNBA5310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223009|gb|AAW41053.1| DNA ligase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 944
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 213/693 (30%), Positives = 333/693 (48%), Gaps = 140/693 (20%)
Query: 177 FDPKMV--ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
FDP V W KG R+P+ L V+ +S+ R+ I I+ N L +M T+P DL P
Sbjct: 185 FDPSRVIATSWPKG-RLPYSILVSVYVQLSSTKSRLAIVRILTNFLHLLMHTSPPDLTPC 243
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
+YL +N + P++ +LGIG + + K++ E G +K +Q+ GD G VA +++
Sbjct: 244 LYLLSNHLTPSYIHCDLGIGSSILSKSIQEISGLQARDLKHLWQKYGDPGDVAFEAKNKL 303
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
+ +P PL +V+D IAK G +S + K ++ LL+ A E ++L+R + L
Sbjct: 304 RTLVQPAPLLAGEVYDKLLEIAKVKGSNSGKIKNELVRKLLIRAKGEEVRFLVRSIVGNL 363
Query: 355 RIGLAEQTLLAALGQAAVY-----------------------NEQHS---KPPPNIQSPL 388
RIG TLL AL +A N++ S K PP++
Sbjct: 364 RIGAVRLTLLTALARATTITRLPADLKQSIIPLPRATANDGRNDKRSVITKAPPDVARDS 423
Query: 389 EE-----AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
E A +IV++V+ P YE +V A L +GV +L + + GIP+ PML T+ +
Sbjct: 424 AETLCLDAIRIVRKVYVRHPNYEDLV-AGLKEGVESLEDKVPVSVGIPLSPMLGSITRSL 482
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIH-----------------YLEDGS---VEIYSRNA 483
+E+ + + FT E K DG+R Q+H Y ++G+ V ++SR+
Sbjct: 483 NEVFTRLGHLSFTAEAKLDGQRGQLHIRLDGPEGKDDGGGRWVYADNGTKVWVRLFSRHL 542
Query: 484 ERNTGKFPDVV-LAVSRLKKP--------------------------SVRSFVLDCEIVA 516
E T K+PD+ LA+ L +P ++ S V+D EIVA
Sbjct: 543 EDMTDKYPDICHLALDLLSRPLATERPPFPAVSSRPFSRVIDLLHINNITSVVMDTEIVA 602
Query: 517 YDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYD 576
D++ FQ LS RA+K+V + +IKV V ++AFD++ N LL RR HL
Sbjct: 603 LDKDTGNFRTFQELSNRAKKDVKMEEIKVIVGVFAFDLMVLNDVSLLDVPFSHRR-HLLH 661
Query: 577 SF-------EEEPGF----FQFATTLTSIDLD----EIQKFLDAAVDASCEGLIIKTMDR 621
S E G F + S+ L E+Q F + V+ CEGL++K ++
Sbjct: 662 SLLPPFAPNSNEVGHPVARFTHVEYIDSVHLTDPEAELQAFFERVVEKKCEGLMVKLLEN 721
Query: 622 D-------------------------------------ATYEPSKRSLNWLKLKKDYIES 644
ATYEP +RS WLK+KKDY+E
Sbjct: 722 GEGLAGEEATEDSLGQEGGLEVKSEQKNGSKSKRQPLPATYEPDQRSQGWLKVKKDYLEG 781
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GDSLDLVPI A+ G+G++ G + LLAC++ ++ +++CK +GFS+A ++ S
Sbjct: 782 LGDSLDLVPIGAWWGQGRKAGWWSPILLACHNPDSGALEAVCKCMSGFSDAFYKDLSKRY 841
Query: 705 RSKVIP----KPRPY-YRFADTISPDVWFEPTE 732
++ +P K P + + + PDVWFEP+E
Sbjct: 842 PAEGMPSKCSKIAPIGFVNTNGLIPDVWFEPSE 874
>gi|453080674|gb|EMF08724.1| ATP-dependent DNA ligase [Mycosphaerella populorum SO2202]
Length = 917
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/468 (36%), Positives = 265/468 (56%), Gaps = 27/468 (5%)
Query: 179 PKMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYL 237
P++ W +G++ + L+ F ++ + T RI D + NMLRT++E P+ L+P V+L
Sbjct: 179 PELRKQWATEGDQCTYALLTHCFVLVGSTTSRIKTVDTLVNMLRTLIEGDPDSLLPAVWL 238
Query: 238 AANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM- 296
A N I+P + +ELG+G ++I KAL + CG + +K Y + GD G VA ++ QS
Sbjct: 239 ATNSISPPYIDIELGLGGSAISKALKKVCGLDNAALKTLYNKHGDAGDVAYEAKKKQSFT 298
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLR 355
+RKP PLTI V+D+ IA G+ Q K++ ++ L+ A E +Y++R L LR
Sbjct: 299 LRKPKPLTIRGVYDSLHRIAAAKGQGCQVVKQSIVERLVQDARGAEESRYIVRTLVQHLR 358
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKP-----------------PPNIQSPLEEAAKIVKQV 398
IG + T+L AL +A + SKP ++ + + ++VK
Sbjct: 359 IGAVKTTMLIALSRAFLL----SKPRGAHFTTRSRDDLKKLTKQDLAAVYQGPEELVKAC 414
Query: 399 FSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC 457
F+ P Y +VP +L G+ + L C IP+ PML T+ + E++ K Q +F C
Sbjct: 415 FARRPNYNDLVPTMLEIGMDDELLIRCGLAMHIPLRPMLGGITRDLGEMLTKLQGRDFAC 474
Query: 458 EYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY 517
E+KYDG+RAQ+H DG V I+SR+ E T K+PD+V V R++ SV SF+L+ E+VA
Sbjct: 475 EFKYDGQRAQVHCDADGKVSIFSRHLEVMTDKYPDLVALVPRIRGESVSSFILEGEVVAV 534
Query: 518 DREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDS 577
DRE + PFQ L+ RARK+V + + VDVC+++FD++Y NG+ LL R RR L
Sbjct: 535 DRETGDLKPFQILANRARKDVVIQSVTVDVCLFSFDLMYLNGEELLDRPFRERRSLLRSL 594
Query: 578 FEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDA 623
F E P F + +L TS D++ + F A D CEG+++K +D A
Sbjct: 595 FVEIPNHFTWVKSLDATSADVETVSNFFKQATDIKCEGIMVKVLDNAA 642
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 15/122 (12%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+TYEP KR +WLK+KKDY + D++DL+P+ A+HG+G++ + LLAC +
Sbjct: 717 STYEPDKRLDSWLKVKKDY-NTQTDTIDLIPVGAWHGQGRKNAWWSPILLACRNPETGAL 775
Query: 683 QSICKIGTGFSEAM-----------LEERSSSLRSKVIPKPRPYYRFADTI-SPDVWFEP 730
+ + K +GF++A E+ K + RP Y D I +PDVWFEP
Sbjct: 776 EVVTKCISGFTDAFYKANRAKYDPDFEDEDGVKVGKNVMSARPTY--VDYIGTPDVWFEP 833
Query: 731 TE 732
E
Sbjct: 834 QE 835
>gi|255074177|ref|XP_002500763.1| predicted protein [Micromonas sp. RCC299]
gi|226516026|gb|ACO62021.1| predicted protein [Micromonas sp. RCC299]
Length = 654
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 198/555 (35%), Positives = 294/555 (52%), Gaps = 59/555 (10%)
Query: 224 METTPEDLVPVVYLAANKIAPAHE-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGD 282
M P DL+ VYL + A HE G EL +G A++ ++AEA G ++ V + E+GD
Sbjct: 1 MNRAPRDLLAAVYLTFGRCAERHEVGSELVVGGATVGASIAEAAGVSKQTVARMNDELGD 60
Query: 283 LGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE 342
LG VA A + Q + KP PLT+ +V +T R IA E G S +KK+R+ L+ AA + E
Sbjct: 61 LGDVAVALKRRQVTLAKPKPLTVRRVLETLRAIASEKGAGSAGRKKDRVLGLMRAAREGE 120
Query: 343 PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP-----LEEAAKIVKQ 397
++L R L +RIG + ++L AL AA HS+ N + A V++
Sbjct: 121 IRWLTRTLIRNMRIGANKISVLHALASAA--ETHHSRRDGNASEGEAKLGVTPAMAAVQR 178
Query: 398 VFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF-----QD 452
+S+ P + +VPAL+ GV N +C+ P P+ PMLA T G ++ V + +D
Sbjct: 179 AYSLCPSVDVLVPALVEGGVPNAVRSCTMRPFTPVKPMLASITAGAADAVTRIVCKREED 238
Query: 453 ME----FTCEYKYDGERAQIHYL------EDGSVEIYSRNAERNTGKFPDVV-------- 494
E F EYKYDG RAQIH +D +V+I+SRN E T FPDV
Sbjct: 239 EESGKTFLVEYKYDGVRAQIHVAPSDGGGDDWAVKIFSRNCEDRTAAFPDVANIVLEGAK 298
Query: 495 ----LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK----VD 546
+ V +LD E+V DR ++ FQ L++R R V+ +++ VD
Sbjct: 299 GGSGMVVDPHTGRGGGGLILDAEVVGIDRSTGRLRAFQDLASRPRGGVNEAELAARTAVD 358
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
V ++AFD++ + + VR + S +++ + + ++ + F+ +
Sbjct: 359 VVVFAFDLVLELARSAEVDAPTVREPNALGSDDDDRYDDRLLPAIETV-----RAFMLES 413
Query: 607 VDASCEGLIIKTMDRDAT-YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
+DA+CEG+++K +D D + Y PSKRS WLKLKKDY E++ DSLDLVPI A+ G+G++ G
Sbjct: 414 LDAACEGVMLKRLDGDKSRYSPSKRSDCWLKLKKDYCENLRDSLDLVPIGAWFGQGRKAG 473
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERS-------SSLRSKVIPKPRPYYRF 718
Y FLLA YD E +QS+C+ +GF++ R S + S V P P Y
Sbjct: 474 WYSPFLLAVYDPETETYQSMCRCMSGFTDEFYRTRRENFGKPPSLVESGVKP---PVY-- 528
Query: 719 ADTI-SPDVWFEPTE 732
DT+ PDVWF PTE
Sbjct: 529 -DTLEQPDVWFNPTE 542
>gi|367048523|ref|XP_003654641.1| hypothetical protein THITE_2117766 [Thielavia terrestris NRRL 8126]
gi|347001904|gb|AEO68305.1| hypothetical protein THITE_2117766 [Thielavia terrestris NRRL 8126]
Length = 881
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/471 (37%), Positives = 268/471 (56%), Gaps = 21/471 (4%)
Query: 176 EFDPKMVACW-EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
++ P++ W +G + L+ F +++ RI I D + N +R ++ P L+P
Sbjct: 155 KYVPELQNSWASEGGDASYALLTRCFVLVNGTQSRIKIVDTLVNCMRLLIVGDPASLLPA 214
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
V+L+ N I+P + +ELGIG +++ KAL +ACG +K Y ++GD G VA ++ Q
Sbjct: 215 VWLSTNAISPPYISMELGIGGSALSKALKQACGLDNRALKSLYDKLGDPGDVAFEAKKKQ 274
Query: 295 SM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQS 352
S +RKP PLTI VF + IAK G+ S E K+ + LL A E +Y++R L
Sbjct: 275 SFTLRKPKPLTIKGVFQSLVKIAKSQGQGSGEVKQRIVDRLLQDARGGEESRYIVRTLCQ 334
Query: 353 KLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLE--------------EAAKIVKQV 398
LRIG + T+L AL +A + + P ++ P E A ++VK
Sbjct: 335 HLRIGAVKTTMLIALSRAFLLSRPAGAGFP-VKDPRELAKLKKDELAEVWTRAEELVKAS 393
Query: 399 FSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC 457
++ P Y ++P LL GV L C T IP+ PML T+ +SE++ K Q +F C
Sbjct: 394 YARHPDYNDLIPVLLEIGVSEELLVRCGLTLHIPLRPMLGSITRDLSEMLTKLQGRDFAC 453
Query: 458 EYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY 517
EYKYDG+RAQ+H +G V I+SR+ E T K+PD+V V +++ V SF+L+ E+VA
Sbjct: 454 EYKYDGQRAQVHCDANGKVSIFSRHLELMTDKYPDLVALVPKIRGDGVESFILEGEVVAV 513
Query: 518 DREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDS 577
DR ++ FQTL+ RARK+V++ I +DVC++AFD++Y NGQ LL + R RR+ L
Sbjct: 514 DRATGELRNFQTLTNRARKDVAIGSITIDVCLFAFDLMYLNGQSLLDQPFRHRRDLLRSL 573
Query: 578 FEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYE 626
F E P F + L TS D + + +F +A+D+ CEG+++KT+D A E
Sbjct: 574 FVEIPHHFTWVKNLDATSQDSEAVLEFFKSALDSKCEGIMVKTLDNFAELE 624
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 12/120 (10%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
ATYEP KR +WLK+KKDY S D+LDLVPIAA+HG+G++ + LLA +
Sbjct: 679 ATYEPDKRLESWLKVKKDYHASTADTLDLVPIAAWHGQGRKAKWWSPILLAVRNDETGCL 738
Query: 683 QSICKIGTGFSEAMLEER----------SSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
+++CK +GF++A + R+ KP P+ + D +PDVWFEP E
Sbjct: 739 EAVCKCMSGFTDAFYKANRAFYDDGSGGGGEARNTHARKP-PFVEY-DGPAPDVWFEPCE 796
>gi|407917350|gb|EKG10664.1| DNA ligase ATP-dependent [Macrophomina phaseolina MS6]
Length = 921
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 263/469 (56%), Gaps = 27/469 (5%)
Query: 179 PKMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYL 237
P + + W +G + L+ F +I++ RI I D + N+LRTV+E P+ L+P V+L
Sbjct: 178 PDLKSHWAAEGGYATYAILTRCFVLINSTQSRIKIVDTLVNLLRTVIEGDPDSLLPAVWL 237
Query: 238 AANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM- 296
A N I+P + LELG+G ++I KAL G +K Y + GD G VA ++ QS
Sbjct: 238 ATNSISPPYVDLELGLGGSAISKALMRVYGLNSVGLKSLYNKYGDAGDVAFEAKKRQSFT 297
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLR 355
+RKP PLTI V+D+ IA G+ SQE K+ ++ LL + E +Y++R L LR
Sbjct: 298 LRKPKPLTIKSVYDSLVKIANSKGQGSQEVKQRVVEWLLQDSRGAEESRYVVRTLVQHLR 357
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAA-----------------KIVKQV 398
IG + T+L AL +A + S PP PL + +IVK
Sbjct: 358 IGAVKTTMLIALSRAFLM----SCPPGADFQPLTNCSLAKLKKDQLSEIYSRNEEIVKAC 413
Query: 399 FSVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC 457
F+ P Y+ +VP LL GV + L C + +P+ PML T+ + EI+ K Q +F+C
Sbjct: 414 FARRPNYDDLVPTLLEIGVCDELLVRCGLSLHVPLRPMLGSITRDLGEILTKLQGRDFSC 473
Query: 458 EYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY 517
E+KYDG+RAQ+H E G V I+SR+ E T K+PD+V V +++ V SF+L+ E+VA
Sbjct: 474 EFKYDGQRAQVHCDEKGKVTIFSRHLEVMTDKYPDLVALVPQIRGEGVSSFILEGEVVAI 533
Query: 518 DREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDS 577
DRE + PFQ LS RARK+V + +K+DVC++AFD++Y NG+ LL R RR L
Sbjct: 534 DRETGDLKPFQVLSNRARKDVVIHSVKIDVCLFAFDLMYLNGEELLNRPFRERRSLLRSL 593
Query: 578 FEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDAT 624
F P F + L +S D + + +F A + CEG+++K +D +T
Sbjct: 594 FTPIPRHFTWVENLDASSADQEAVSEFFKRATEKKCEGIMVKVLDNLST 642
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 35/142 (24%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
ATYEP KR +WLK+KKDY S D++DL+P+ A+HG G++ + LLA + +
Sbjct: 701 ATYEPDKRLDSWLKVKKDYNTS-ADTVDLIPVGAWHGNGRKCKWWSPILLAVRNPDTGCL 759
Query: 683 QSICKIGTGFSEAML-------------------------------EERSSSLRSKVIPK 711
+++ K +GF++ EE S + +
Sbjct: 760 EAVTKCMSGFTDKFYAANRAKYDPDVGLAGFDDIYDGRKQIGSSYNEEESKKDKFSNVRA 819
Query: 712 PRPYYRFAD-TISPDVWFEPTE 732
+P F D PDVWFEP E
Sbjct: 820 SKP--AFVDYNGEPDVWFEPQE 839
>gi|321249873|ref|XP_003191605.1| DNA ligase [Cryptococcus gattii WM276]
gi|317458072|gb|ADV19818.1| DNA ligase, putative [Cryptococcus gattii WM276]
Length = 945
Score = 305 bits (780), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 213/695 (30%), Positives = 330/695 (47%), Gaps = 144/695 (20%)
Query: 177 FDPKMVAC--WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
FDP +A W KG R+P+ L V+ +S+ R+ I I+ N L +M T+P DL P
Sbjct: 186 FDPSQIAATSWPKG-RLPYSILVGVYGQVSSTKSRLAIIRILTNFLHLLMHTSPPDLTPC 244
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
+YL +N + P++ +LGIG + + K++ E G +K +Q+ GD G VA +RS
Sbjct: 245 LYLLSNHLTPSYIHCDLGIGSSILSKSIQEVSGLQARDLKHLWQKYGDPGDVAFEARSKL 304
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
+ +P PL +V+D I++ G +S + K ++ LL+ A E ++L+R + L
Sbjct: 305 RTLVQPAPLLAGEVYDKLLEISRVKGNNSGKIKNELVRKLLIRAKGEEVRFLVRSIIGNL 364
Query: 355 RIGLAEQTLLAALGQA-----------------------AVYNEQHS---KPPPNIQSPL 388
RIG TLL AL +A A N++ S K P++
Sbjct: 365 RIGAVRLTLLTALARATTIIRLPADLKQSIIPLLRATVNADGNDKRSVITKARPDVARDT 424
Query: 389 EE-----AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
E A +IV++V+ P Y +V A L +GV +L + + GIP+ PML T+ +
Sbjct: 425 AETLCLDAIRIVRKVYVRHPNYGDLV-AGLKEGVESLEDKVPVSVGIPLSPMLGSITRSM 483
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS--------------------VEIYSRNA 483
+E+ + + FT E K DG+R Q+H DG V ++SR+
Sbjct: 484 NEVFTRLGHLSFTAETKLDGQRGQLHVRLDGPEGKDDGGGRWVNADNGTKLWVRLFSRHL 543
Query: 484 ERNTGKFPDVV-LAVSRLKKP--------------------------SVRSFVLDCEIVA 516
E T K+PD+ LA+ L +P +V S V+D EIVA
Sbjct: 544 EDMTDKYPDICHLALELLSRPLPTERPPFPALSSQPSSRVLDLLNISNVTSVVMDTEIVA 603
Query: 517 YDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYD 576
D++ FQ LS R +K+V + DIKV V ++AFD++ N LL RR L+
Sbjct: 604 LDKDNGNFRTFQELSNRGKKDVKMEDIKVVVGVFAFDLMVINDVSLLDLPFSHRRHLLHT 663
Query: 577 SFEEEPGF-------------FQFATTLTSIDLD----EIQKFLDAAVDASCEGLIIK-- 617
P F F + S +L E+Q F + V+ CEGL++K
Sbjct: 664 LL---PSFTPKSNQVGHPVARFTHVEYIDSANLTDPAAELQTFFERVVEKKCEGLMVKLL 720
Query: 618 --------------TMDRD---------------------ATYEPSKRSLNWLKLKKDYI 642
+DR+ ATYEP +RS WLK+KKDY+
Sbjct: 721 ENGEGLAGEDATEDDLDRERGQEIKSEQKNGGRNKRQPLPATYEPDQRSQGWLKVKKDYL 780
Query: 643 ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSS 702
E +GDSLDLVPI A+ G+G++ G + LLAC++ ++ +++CK +GFS+A ++ S
Sbjct: 781 EGLGDSLDLVPIGAWWGQGRKAGWWSPILLACHNPDSGALEAVCKCMSGFSDAFYKDLSK 840
Query: 703 SLRSKVIP----KPRPY-YRFADTISPDVWFEPTE 732
++ +P K P + + + PDVWFEP+E
Sbjct: 841 RYPAEGMPGKCSKIAPLGFVNTNGLIPDVWFEPSE 875
>gi|358385739|gb|EHK23335.1| hypothetical protein TRIVIDRAFT_64213 [Trichoderma virens Gv29-8]
Length = 878
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/446 (39%), Positives = 260/446 (58%), Gaps = 18/446 (4%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
+ L+ F ++S T RI I D + N LR ++E P L+P V+LA N I+P + +ELG
Sbjct: 175 YALLTRCFVLVSATTSRIKIVDTLVNCLRILVEGDPSSLLPAVWLATNSISPPYISMELG 234
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDT 311
+G ++I KAL + CG +K Y + GD G VA ++ QS +RKP PLTI V+ +
Sbjct: 235 LGGSAISKALRQVCGLDNRSLKAIYDKYGDPGDVAFEAKKKQSFTLRKPKPLTIKGVYQS 294
Query: 312 FRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRIGLAEQTLLAALGQA 370
IA G+ S E K+ + LL A E ++++R + LRIG + T+L AL +A
Sbjct: 295 LVKIATTHGQGSGEVKQRIVDRLLQDARGGEESRFIVRTVSQYLRIGAVKTTMLIALSRA 354
Query: 371 -----AVYNEQHSKPPPNIQSPLEE--------AAKIVKQVFSVLPVYEKIVPALLTDGV 417
A +E +K + +E A +IVK F+ P Y +VPALL GV
Sbjct: 355 FLLSKAPGSEYGTKDITELSKLKKEELAEVWSRAEEIVKASFARHPNYNDLVPALLDIGV 414
Query: 418 WN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
L C T +P+ PML T+ +SE++ K Q +F CEYKYDG+RAQ+H E G V
Sbjct: 415 CEELLLRCGLTLHVPLRPMLGSITRDLSEMLTKLQGRDFACEYKYDGQRAQVHCDEKGKV 474
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
I+SR+ E T K+PD+V V +++ + SF+++ E+VA DRE ++ FQTL+ RARK
Sbjct: 475 SIFSRHLELMTEKYPDLVELVPKIRGEGIGSFIMEGEVVAVDRETGELKNFQTLTNRARK 534
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSI 594
+V++ DIK+DVC++AFD++Y NGQ LL R RRE L F E P F + +L TS
Sbjct: 535 DVAIGDIKIDVCLFAFDLMYLNGQSLLDRPFRERRELLRSLFIEVPHHFTWVQSLDATSG 594
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMD 620
D + + +F +A++ CEG+++K +D
Sbjct: 595 DSEAVLEFFKSALENKCEGIMVKILD 620
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 16/121 (13%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
ATYEP KR +WLK+KKDY S D+LD++P+A +HG+G++ + LLA + +
Sbjct: 677 ATYEPDKRLDSWLKVKKDYNSSF-DTLDMIPVAGWHGQGRKAKWWSPILLAVRNEESGTL 735
Query: 683 QSICKIGTGFSEAMLE---------ERSSSLRSKVIPKPR--PYYRFADTISPDVWFEPT 731
+ +CK +GF++A + E S ++ + KP YY SPDVWFEP
Sbjct: 736 EVVCKCISGFTDAFYKANKEFYDNGEESGEPKNTKLQKPSFIEYY----GPSPDVWFEPQ 791
Query: 732 E 732
E
Sbjct: 792 E 792
>gi|388581891|gb|EIM22198.1| ATP-dependent DNA ligase [Wallemia sebi CBS 633.66]
Length = 943
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 197/591 (33%), Positives = 310/591 (52%), Gaps = 63/591 (10%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+ FI S+ RI IT+I+ N LR V + P+ L+P ++L ++++ P +E E
Sbjct: 305 IQFILFVQACVECSSTRSRIEITNILTNYLRIVRKNDPDALLPSLWLFSSQLGPPYEPNE 364
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-KASRSSQSMMRKPDPLTITKVF 309
LG+G + AL + + + +K+ + +GD+G VA +A+R+ S++ KP PLT+++V+
Sbjct: 365 LGVGKLVLNGALKDVAALSPTRLKQLHNRLGDIGDVAFEATRNVISVV-KPKPLTVSQVY 423
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
TF+ IA + G S K N +K LLV+A + ++L+R L LRIG TL AL +
Sbjct: 424 GTFKDIATQHGPRSVTAKTNLVKKLLVSAKAEQARWLMRALVQNLRIGAVRTTLSHALAR 483
Query: 370 AAVYNEQHSKPPPNIQSPLE--EAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
A + +P++ A KIV++V++ P Y +V ALL G+ L
Sbjct: 484 AFA-----------VGTPIDLPSAEKIVRRVYARHPNYTTLVKALLDSGLNELEMKVPVQ 532
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH---------------YLE 472
G P+ PML T+ ++++ + + FT E K DG+R Q+H +
Sbjct: 533 VGTPVQPMLGAITRSLADVQTRLRGQPFTSEAKLDGQRCQLHASLVDSKQKNGWTSPLVR 592
Query: 473 DGS---VEIYSRNAERNTGKFPDVVLAVSRLKK--PSVRSFVLDCEIVAYDREKQKILPF 527
D + V ++SR E T K+PD +++ + K PS+ S VLD EI A D + I F
Sbjct: 593 DNTYLYVRLFSRRLEDMTEKYPDAAMSLYEIFKNEPSLSSIVLDAEIAAID-DMDNIRSF 651
Query: 528 QTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEE-EPGFFQ 586
Q LS R+RK V + ++K+ V ++ FD + NG+ LL + R RR + +P
Sbjct: 652 QELSNRSRKAVDVDEVKIRVAVFGFDCMLFNGETLLDKPFRERRSIMRTHVPPFKPSSIT 711
Query: 587 FA--TTLTSID---LDEIQKFLDAAVDASCEGLIIKTMDR-----------------DAT 624
+A + SID L EI F + + EG+++K +D AT
Sbjct: 712 YAPWDHMPSIDDTGLVEISAFFEKCMTMKAEGIMVKLLDYYEPTDTDDAVKTRRKALPAT 771
Query: 625 YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQS 684
YEP KR+ +WLK+KKDY+E +GDS+DLVPI A+HG G++ + LL YD + +
Sbjct: 772 YEPDKRAESWLKVKKDYLEDVGDSIDLVPIGAWHGMGRKNQFWSPILLGVYDDDEGAVTA 831
Query: 685 ICKIGTGFSEAM---LEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
+CK +GFS+A + ER + S V P DT SPDV+F+P+E
Sbjct: 832 VCKCMSGFSDAFYKAIGERYAEGSSNVSKHAFPGVIIGDT-SPDVYFQPSE 881
>gi|402217194|gb|EJT97275.1| ATP-dependent DNA ligase [Dacryopinax sp. DJM-731 SS1]
Length = 849
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 206/677 (30%), Positives = 310/677 (45%), Gaps = 117/677 (17%)
Query: 183 ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKI 242
AC G PF FLS +S RILI +I+ N LR ++ P L VYL +N +
Sbjct: 83 ACPWSGSNAPFAFLSNALISLSGTRSRILILNILTNTLRYIIAYDPASLTAAVYLLSNSL 142
Query: 243 APAHE-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD 301
PA++ EL IG + + KAL T + ++ Y + GD G VA +++S + P
Sbjct: 143 GPAYQTNTELNIGGSVLSKALLATTSLTPAKLRHLYHQHGDPGDVAFHAKTSVRTLVAPS 202
Query: 302 PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQ 361
PLTI ++D IA G+ ++K+ ++ LLV A E +++ R+L LR+G
Sbjct: 203 PLTIQGLYDKLLAIAGAKGQGVVKRKEEIVRGLLVQAQGEEVRWVYRILSLNLRVGAVRN 262
Query: 362 TLLAALGQA---------AVYNEQHSKPPPNIQSP-----------------------LE 389
TLL A+ +A + E P I++ L
Sbjct: 263 TLLQAVARAFALSQPEKSMLKKEDDEYVPEEIKAQVLPPPKGKKKAPPDPARTKATEILL 322
Query: 390 EAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
+A VK+ ++ P Y I+ LL + L + T G+P+ P L P + + EI ++
Sbjct: 323 KAEGTVKRTYAQHPNYGHIIRGLLNGRLGELPDRVPLTVGVPLLPTLGSPMRSLEEIYDR 382
Query: 450 FQDMEFTCEYKYDGERAQIHY-----------------------LEDG---SVEIYSRNA 483
+ F E KYDG+RAQ+H + DG SV ++SR+
Sbjct: 383 LSGLPFAAEMKYDGQRAQVHVSVLKDSEDFTGDNGVQNNQFVVDIGDGRKASVRMFSRHL 442
Query: 484 ERNTGKFPDVVLAVSRL--KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLS 541
E T K+PDV++ ++ + + PS+ SF+LD EIVA D + FQ LS RARK+V L
Sbjct: 443 EDMTDKYPDVLVMLASVLARNPSLESFILDSEIVALDPATGSLKSFQELSNRARKDVKLE 502
Query: 542 DIKVDVCIYAFDILYRNGQPLLQEQLRVR----REHLYDSFEEEPGFFQFATTLTSIDL- 596
D+KV V ++ FD+LY NGQPLL + R R R+HL ++ + S+D
Sbjct: 503 DVKVSVGLFVFDLLYLNGQPLLSKTFRERRATLRQHLPPYTPQDVRLSARLEWVESVDSE 562
Query: 597 ---DEIQKFLDAAVDASCEGLIIKTMDRD------------------------------- 622
D + F + AV EGL++K +D
Sbjct: 563 DGEDVVLGFWEQAVAGKYEGLMLKILDSGEVLDDDIGVSSDAEDSPKKKGKKKVQEKEEE 622
Query: 623 -------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
ATYEP KR++ WLKLKKDY+ + GDSLDL+PI A+HG G++ +
Sbjct: 623 KSKKNGSRRKPLPATYEPDKRTMAWLKLKKDYVLTTGDSLDLIPIGAWHGNGRKARWWSP 682
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAM---LEERSSSLRSKVIPKPRPYYRFADTISPDV 726
LL +D N ++CK +GF++ L ER S + + SP V
Sbjct: 683 ILLGVWDENEGRPVALCKCMSGFTDVFYKSLNERYQE-GSDTCSRTPLWDVETSGYSPSV 741
Query: 727 WFEPTERPETSNSPASI 743
+F+P E E + +I
Sbjct: 742 YFKPQEVWEVRGADITI 758
>gi|449303996|gb|EMD00004.1| hypothetical protein BAUCODRAFT_63974 [Baudoinia compniacensis UAMH
10762]
Length = 882
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 183/524 (34%), Positives = 275/524 (52%), Gaps = 44/524 (8%)
Query: 130 PIDSEKESQPTPPSPKKRKV--NVNSVSAKEKIAEL--KSNIVLLKKKAGEFDPKMVACW 185
P D E+E Q +PK + N+ A + L K + + L+ E D
Sbjct: 108 PPDKEEEEQAVDVAPKHEETVDNIEDKPASNAFSALGGKKSTLSLQSATAEEDNTTY--- 164
Query: 186 EKGERVPFIFLSLVFD-------MISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLA 238
VPF L FD + + RI I D + N+LRT++E PE L+P V+LA
Sbjct: 165 ----NVPFDQSPLTFDPQTHLTELKKHTQSRIKIVDTLVNLLRTIIEGDPESLLPAVWLA 220
Query: 239 ANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-M 297
N IAP + +ELG+G ++I KAL + CG + +K Y GD G VA ++ QS+ +
Sbjct: 221 TNSIAPPYIDIELGLGGSAISKALKKVCGLDNAALKTLYNRHGDAGDVAFEAKKRQSLTL 280
Query: 298 RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQSKLRI 356
RKP PLTI V++ IA G S E K+ ++ L+ A E +Y++R L LRI
Sbjct: 281 RKPKPLTIKGVYEALHKIANAKGHGSVEVKQRIVERLVQDARGAEESRYIVRTLVQHLRI 340
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPP-----------------NIQSPLEEAAKIVKQVF 399
G + T+L AL +A + S+PP N+ ++VK F
Sbjct: 341 GAVKTTMLIALSRAFLL----SRPPDADFPIKPTAELGKLSKQNLAEAYSPGEELVKASF 396
Query: 400 SVLPVYEKIVPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
+ P Y +VP LL+ G+ + L C IP+ PML T+ + E++ + Q +F+CE
Sbjct: 397 ARRPNYNDLVPTLLSVGISDELLVRCGLAMHIPLRPMLGGITRDMGEMLTRLQGRDFSCE 456
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
+KYDG+RAQ+H G V I+SR+ E T K+PD+V V +++ V SF+++ E+VA D
Sbjct: 457 FKYDGQRAQVHCDAAGKVTIFSRHLEVMTEKYPDLVALVPQIRGEGVSSFIMEGEVVAVD 516
Query: 519 REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
R ++ PFQ L+ RARK+V + +KVDVC++AFD++Y NG+ LL R RR L F
Sbjct: 517 RASGELKPFQVLANRARKDVVIQSVKVDVCLFAFDLMYLNGEELLNRSFRERRNLLRSLF 576
Query: 579 EEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMD 620
E F + ++ TS D + + F A D CEG+++K +D
Sbjct: 577 VEILNHFTWVRSMDATSADGEAVSDFFKQATDIKCEGIMVKVLD 620
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
ATYEP KR +WLK+KKDY S D++DL+P+ +HG+G++ + LLAC +
Sbjct: 683 ATYEPDKRLDSWLKVKKDYDTSAADTIDLIPVGGWHGQGRKNAWWSPILLACRNEETGTL 742
Query: 683 QSICKIGTGFSEAMLEERSSSL-----RSKVIPKPRPYYRFADTISPDVWFEPTE 732
+ + K +GF++A + VI +P Y +A PDVWFEP E
Sbjct: 743 EVVTKCISGFTDAFYKANKEKYSEDGEHGNVIARP-SYVEYAG--EPDVWFEPQE 794
>gi|302418210|ref|XP_003006936.1| DNA ligase [Verticillium albo-atrum VaMs.102]
gi|261354538|gb|EEY16966.1| DNA ligase [Verticillium albo-atrum VaMs.102]
Length = 708
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 184/516 (35%), Positives = 267/516 (51%), Gaps = 78/516 (15%)
Query: 251 LGIGD--ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITK 307
LGIG ++I KAL + CG +K Y + GD G VA ++ QS +RKP PLTI
Sbjct: 170 LGIGSCGSAISKALKQVCGLNGPSLKNLYDKYGDAGDVAFEAKKKQSFTLRKPKPLTIKA 229
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-EPQYLIRLLQSKLRIGLAEQTLLAA 366
V+ + IA G+ S E K+ + LL A E +Y++R L LRIG + T+L A
Sbjct: 230 VYQSLVKIANTQGQGSGEVKQRIVDRLLQDARGGEESRYIVRTLCQHLRIGAVKTTMLIA 289
Query: 367 LGQAAVYNEQHSKPPPNIQSPLEE------------------AAKIVKQVFSVLPVYEKI 408
L +A PP + + A +IVK F+ P Y +
Sbjct: 290 LARAFSITS-----PPGADFAVRDRGSLAKLKKEELVEVWAKAEEIVKACFAKRPNYNDL 344
Query: 409 VPALLTDGVWN-LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQ 467
VP LL GV + L C T IP+ PML T+ ++E++ K Q +F CEYKYDG+RAQ
Sbjct: 345 VPILLEIGVCDELLLRCGLTLHIPLRPMLGSITRDLTEMLTKLQGGDFACEYKYDGQRAQ 404
Query: 468 IHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
IH G V I+SR+ E T K+PD+V + +++ V SFV++ E+VA DR+ + F
Sbjct: 405 IHCDVKGKVSIFSRHLELMTDKYPDLVALMPQIRGEGVDSFVMEGEVVAIDRQTGDMKNF 464
Query: 528 QTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
Q L+ RARK+V++ I+VDVC+Y+FD++Y NG+PLL R RRE L F E P F +
Sbjct: 465 QALTNRARKDVAIGSIQVDVCMYSFDLMYLNGEPLLDRPFRERRELLRSMFIEVPHQFTW 524
Query: 588 ATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDR------------------------ 621
+L TS D D + F +A D CEG+++K +D
Sbjct: 525 VKSLDATSQDSDAVLDFFKSATDVKCEGIMVKILDNLTEIPYQGGEVDAPVDEMEEPHTP 584
Query: 622 -----------------------DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFH 658
ATYEP KR +WLK+KKDY S D++D+VP+A +H
Sbjct: 585 SKRKVTGKTAENGAKKKTRRKPLLATYEPDKRLDSWLKVKKDYNASF-DTIDMVPVAGWH 643
Query: 659 GRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
G+G++ + LLA + ++ F+ +CK +GF++
Sbjct: 644 GQGRKAKWWSPILLAVRNEDSGSFEVVCKCISGFTD 679
>gi|126458667|ref|YP_001054945.1| ATP-dependent DNA ligase [Pyrobaculum calidifontis JCM 11548]
gi|166215376|sp|A3MS62.1|DNLI_PYRCJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|126248388|gb|ABO07479.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum calidifontis JCM
11548]
Length = 583
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 299/579 (51%), Gaps = 40/579 (6%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ V + + T R + ++ ++ + + PE++ +VY + P EG+ELG+ +
Sbjct: 6 LAKVLAAVESTTQRTTMVKLLTSLFK---KAKPEEIDKIVYFILGDLRPPWEGVELGVAE 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAK-----ASRSSQSMMRKPDPLTITKVFD 310
I+A+++A G + + ++ Y++ GD+G VA+ R + + PL + +V+D
Sbjct: 63 KLCIRAISKATGLSAAELEGWYKKSGDVGEVARRALAAGKRPTLLAFAQQKPLEVAEVYD 122
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
T +AK AG+ +Q+ K + + +L A+ E +Y+ R + KLR+G+A+ TL+ AL +A
Sbjct: 123 TLLKVAKAAGEGAQDLKVSLLSSLFSRASPEEAKYIARFVVGKLRLGVADMTLIEALSEA 182
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
+++ + ++ L ++ + V P+ E TPG+
Sbjct: 183 FGVSKEGLERAYHVYPDL---GRLARHVAEGRPLEE-----------------IKITPGV 222
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
P+ PMLA+ SEI+ K CEYKYDGERAQIH L +GSV+I+SR E T +
Sbjct: 223 PVLPMLAQRLSSASEILAKLGGTAI-CEYKYDGERAQIH-LREGSVKIFSRRLEDITHAY 280
Query: 491 PDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCI 549
PDV AV K R +L+ EIVA D + ++LPFQ L R RK +V+ + +
Sbjct: 281 PDVAKAVKEAVK--AREAILEGEIVAVDPDTGEMLPFQELMHRKRKHDVAEAMEAYPAVL 338
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
Y FD+LY +G+ L + L RR L + EE G A +++ F AV
Sbjct: 339 YLFDLLYVDGEDLTTQPLIYRRLRLSEVVEE-GGDVYIAKWGMFDGAEDVDLFFHEAVSL 397
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EGLI K+ +TYE R NW+K K+DY + D++DLV + AFHGRGKR G+YGA
Sbjct: 398 GTEGLICKS--PTSTYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGA 455
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
FLLA YD + + F ++CK+G+GF++A L L+ IP P R + PDVWF
Sbjct: 456 FLLAAYDPSTDMFYTVCKVGSGFTDADLRRMYDMLQPLKIPHRHP--RVVSKMQPDVWFV 513
Query: 730 PTERPETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
P E A I TC + P RF R
Sbjct: 514 PQVVIEVIG--AEITLSPLHTCCIGAVKPGVGLAIRFPR 550
>gi|392575755|gb|EIW68887.1| hypothetical protein TREMEDRAFT_31295 [Tremella mesenterica DSM
1558]
Length = 824
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 209/686 (30%), Positives = 321/686 (46%), Gaps = 140/686 (20%)
Query: 182 VACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANK 241
V+ W KG R+P+ L V+ +S+ R+LI ++ N L V+ +P DL P +YL +N
Sbjct: 42 VSNWPKG-RLPYSVLVGVYVQVSSTRSRLLIVRVLTNFLHLVLHASPIDLPPSLYLLSNH 100
Query: 242 IAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD 301
+ P++ ELGIG + KA+ E G +KK +++ GD G VA ++S+ + +P
Sbjct: 101 LLPSYLPCELGIGSQILSKAIQEVSGLQPRDLKKLWEKWGDPGDVAFEAKSNLRTLVQPA 160
Query: 302 PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQ 361
PL + V++ +++ G S K + ++ L+V A E ++L+R L LRIG
Sbjct: 161 PLLVEDVYNRLLGMSRIKGAQSARLKGDIVRKLMVQARGEEARFLVRSLVGNLRIGAVRL 220
Query: 362 TLLAALGQAAVYNE-------QHSKPPP----------------------NIQSPLEEAA 392
TLL +L +A Q + PP ++ EA
Sbjct: 221 TLLTSLARATALLHMDKELLGQVKEIPPLATKEKGKRAVKVKVEPEPAREEVEQKCLEAV 280
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
K+V++V+ P Y +V L G+ L + + GIP+ PML T+ ++E+ +
Sbjct: 281 KLVRKVYVRHPNYRDLVIGLENGGLIGLEDRVAVNVGIPLSPMLGSITRSLNEVFTRLGT 340
Query: 453 MEFTCEYKYDGERAQIHY-----------------LEDGS---VEIYSRNAERNTGKFPD 492
+ FT E K DG+R QIH EDGS V ++SR+ E T K+PD
Sbjct: 341 LPFTAEAKLDGQRVQIHARFDGPQGEPDGGGRWVEAEDGSRIWVRLFSRHLEDMTEKYPD 400
Query: 493 V----------------------------VLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
V VLA+ L+ +RSFV+D EIVA D+E
Sbjct: 401 VLHLVLTLLTRSLPSRTTFPKEASEPSQDVLAL--LQTKQIRSFVMDAEIVAVDKESGAF 458
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRRE---HLYDSFEE- 580
FQ LS RA+K+V + DIKV V ++AFD++ + PLL RR L+ SF+
Sbjct: 459 RTFQDLSNRAKKDVKVEDIKVVVGVFAFDLMLLDDVPLLDAPFSHRRHLLRTLFPSFKNP 518
Query: 581 -EPGFFQFATTLTSIDLD-------EIQKFLDAAVDASCEGLIIKTM------------D 620
+P +F + SID + E+Q F + V+ CEG+++K + D
Sbjct: 519 SDPTLARF-EHVESIDSNSLTDVPAELQTFFERVVEQKCEGVMVKLLESGEGITGEDAED 577
Query: 621 RD-------------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
D ATYEP +RS WLK+KKDY+E +GDSLDLVPI
Sbjct: 578 DDVVGEGKENTPSKKGKKGGGNKKPLPATYEPDQRSQGWLKVKKDYLEGLGDSLDLVPIG 637
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
A+ G+G++ G + LLAC++ +++CK G S ++ L + P+ +P
Sbjct: 638 AWWGQGRKAGWWSPILLACHNPQTGALEAVCKCDIGIS-GFTDQFYKDLLIRYPPEGQPE 696
Query: 716 ---------YRFADTISPDVWFEPTE 732
Y + PDVWF P+E
Sbjct: 697 KCSKSSPLGYYDTGGLRPDVWFAPSE 722
>gi|387594385|gb|EIJ89409.1| DNA ligase [Nematocida parisii ERTm3]
Length = 541
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 287/497 (57%), Gaps = 41/497 (8%)
Query: 278 QEMGDLG-LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLV 336
+E GD+ ++ +R +RK L +++VF + +++ GKDS +K +I LL
Sbjct: 2 KEKGDISSVITVKNRPKLFFIRKNQVLYLSEVFSCLKGLSEMTGKDSTAQKVQKIAELLT 61
Query: 337 -AATDCEPQYLIRLLQSKLRIGLAEQTLLAALG-------------QAAVYNEQHSK--P 380
+ D E +Y+IR++ K++IGL+ Q++L LG + +++ ++ K
Sbjct: 62 RCSVDEEIKYIIRIIDGKMKIGLSTQSILCGLGLSFKERFGLKNSEKTVIFDSENGKIQT 121
Query: 381 PPNIQSP----LEEAAKI---VKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIG 433
N+ S ++ K+ +K+ ++ LP +EKI+ + ++G+ +LS+ TPG P+
Sbjct: 122 ENNLCSNQIEWTDDENKVMEDIKEAYAQLPSFEKIIKNVFSNGISSLSSDL-ITPGYPLR 180
Query: 434 PMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDV 493
PMLA P K + +F+ E+ EYKYDGER Q HY +G +E++SR E T +F +
Sbjct: 181 PMLAIPEKSPETVSARFKS-EYLVEYKYDGERVQAHYF-NGKIELFSRGLESTTERFNQL 238
Query: 494 VLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK----NVSLSDIKVDVCI 549
+ ++ + K SF++D E+VAY R+ QKIL FQTLS R RK N S+ D+ +
Sbjct: 239 IDSLKKSNKTG-ESFIIDAEVVAYCRDTQKILSFQTLSNRKRKFTESNAGKSE--SDIAL 295
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG--FFQFATTLTSIDLDEIQKFLDAAV 607
+ FDILY G+PL + +R R++ L +SF + G F + + DL+ + K ++
Sbjct: 296 FIFDILYL-GRPLNKMSIRERKKILNESFTQIKGEIFIAESFMFCTNDLERLNKIFSDSL 354
Query: 608 DASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
+ CEG+++K+ D D+ YEPSKRS W+KLK DYI + ++LDL+ I + G+GKRTGV
Sbjct: 355 ASGCEGVMVKSADETDSGYEPSKRSQKWVKLKSDYITGLFETLDLLVIGGYTGKGKRTGV 414
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
YG FLL C + N ++I KIGTGFSEA+LE+ S L+S + + + +T PDV
Sbjct: 415 YGGFLLGCLNENG-VVETITKIGTGFSEAVLEDLSKELKSCITTEAQTEISIQNT--PDV 471
Query: 727 WFEPTERPETSNSPASI 743
WF+P E + + S+
Sbjct: 472 WFKPVTVWEVAAAGFSV 488
>gi|401883830|gb|EJT48014.1| DNA ligase [Trichosporon asahii var. asahii CBS 2479]
Length = 358
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/297 (49%), Positives = 201/297 (67%), Gaps = 14/297 (4%)
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLAKPTK + E++++F+ FTCEYKYDGERAQ+H L+DG++ ++SRN+E + K+PD+V
Sbjct: 1 MLAKPTKAIGEVLDRFEGKPFTCEYKYDGERAQVHLLDDGTISVFSRNSENMSAKYPDLV 60
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDI 554
+ R SFVLD E VA+D E +K+LPFQ LS R RK+V DI V V ++AFD+
Sbjct: 61 EQIPR-------SFVLDSEAVAFDLETKKLLPFQDLSRRKRKDVKAEDITVRVHLFAFDL 113
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGL 614
LY NG+ L+E+ + +EH + + E E F FA + +EIQ FL+ +V CEGL
Sbjct: 114 LYLNGEMELKERRALLQEH-FTAVESE---FGFAKSSDGSTTEEIQTFLEESVKDGCEGL 169
Query: 615 IIKTMDRDA-TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
++K + DA TYEPS+RS+NWLK KDY+ +GDSLDLV + A++G+GKRT YGAFLLA
Sbjct: 170 MVKMLASDASTYEPSRRSINWLK--KDYLSGVGDSLDLVVVGAYYGKGKRTNWYGAFLLA 227
Query: 674 CYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
CYD ++E +Q+ICKIGTGFSE +L++ L + PDVWFEP
Sbjct: 228 CYDPDSENYQTICKIGTGFSEEILKQFYDELHPLELTGGARGNIEVGGAKPDVWFEP 284
>gi|379005375|ref|YP_005261047.1| DNA ligase I [Pyrobaculum oguniense TE7]
gi|375160828|gb|AFA40440.1| DNA ligase I, ATP-dependent (dnl1) [Pyrobaculum oguniense TE7]
Length = 584
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 191/575 (33%), Positives = 305/575 (53%), Gaps = 46/575 (8%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
+ + T R ++ ++ ++ + + PE++ V+YL + P EGLELG+G+ ++AL
Sbjct: 13 VESTTQRSVMVKLLASLFKKAL---PEEIDKVIYLILGDLRPPWEGLELGVGEKLCLRAL 69
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD--------PLTITKVFDTFRL 314
A+A G +++ ++ Y++ GD+G +A+R S + ++P PL +++V+DT
Sbjct: 70 AKATGTSQAELESLYKKTGDIG---EAARRSLASSKRPGLLTFGSQKPLEVSEVYDTLLK 126
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+A+ +G+ +Q+ K + +L ++ E +Y+ R + KLR+G+A+ T++ AL A
Sbjct: 127 VARASGEGAQDMKIALLSSLFARSSPEEGKYIARFVVGKLRLGVADMTIIEALADAYGVR 186
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
++ + ++ L AK+V S P+ E TPG+P+ P
Sbjct: 187 KEDLERAYHVYPDLGHLAKLVA---SGKPLDE-----------------VKVTPGVPVLP 226
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLA+ SEI+ K CEYKYDGERAQIH + G V I+SR E T +PDVV
Sbjct: 227 MLAQRLSSSSEILAKLGGTAI-CEYKYDGERAQIHISQSG-VRIFSRRLEDITHAYPDVV 284
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV-DVCIYAFD 553
AV + R +L+ EIVA D + ++LPFQ L R RK+ ++ +++ +Y FD
Sbjct: 285 KAVK--EAVMAREAILEGEIVAVDPDTGEMLPFQELMHRKRKHEVVAAMEMYPTVLYLFD 342
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEG 613
+++ +G+ L E L RR L + +E Q A L D D + F AV EG
Sbjct: 343 VIFVDGEDLTNEPLIYRRVKLSEIVQESDKV-QIAKWLMLDDPDSVDVFFHEAVSVGTEG 401
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
LI K+ + YE R NW+K K+DY + D++DLV + AF+GRGKR G+YGAFLLA
Sbjct: 402 LICKSPTSE--YEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLA 459
Query: 674 CYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTER 733
YD +++ F ++CK+G+GF++A L++ L+ IP P R + + DVWF P
Sbjct: 460 AYDPSSDMFYTVCKVGSGFTDADLKKMYEILQPLKIPHRHP--RVSSKMEADVWFVPQVV 517
Query: 734 PETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
E A I TC + P RF R
Sbjct: 518 IEVIG--AEITLSPLHTCCLGAVRPGVGLAVRFPR 550
>gi|326485463|gb|EGE09473.1| DNA ligase I [Trichophyton equinum CBS 127.97]
Length = 749
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 172/516 (33%), Positives = 263/516 (50%), Gaps = 79/516 (15%)
Query: 288 KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYL 346
+A + +R+P PLTI V+D IA G SQE K+ ++ LL E +Y+
Sbjct: 169 EAKKKQSFTLRRPKPLTIRSVYDALMKIANSKGTGSQETKQRIVEKLLQDTRGAEESRYI 228
Query: 347 IRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP-----------------NIQSPLE 389
+R L LRIG + T+L AL +A +Y SKPP + S
Sbjct: 229 VRTLVQHLRIGAVKTTILIALARAFLY----SKPPAATFPIRSRAELMSLSKEELSSIYS 284
Query: 390 EAAKIVKQVFSVLPVYEKIVPALLTDGV-WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVN 448
+A +K ++ P Y IVP LL +GV L C T +P+ PML T+ + +++
Sbjct: 285 QAEDTIKACYARHPNYNMIVPCLLENGVSAELLTKCGITLHVPLLPMLGSITRDLPQMLT 344
Query: 449 KFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSF 508
+ FTCEYKYDG+RAQ+H G V I+SR+ E T K+PD+V V +++ +V SF
Sbjct: 345 RLHGRSFTCEYKYDGQRAQVHCDAAGKVSIFSRHLELMTDKYPDLVSLVPQIRSGAVSSF 404
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
+++ E+VA + E ++LPFQTL+ RA+KNV + IKV+VC+++FD++Y NGQPLL R
Sbjct: 405 IMEGEVVAVNNETGELLPFQTLTNRAKKNVEIGSIKVNVCLFSFDLMYLNGQPLLNRTFR 464
Query: 569 VRREHLYDSFEEEPGFFQFATTLTSI--DLDEIQKFLDAAVDASCEGLIIKTMDRD---- 622
RRE L F E P F + ++ + D D + F + A+ CEG+++K +D
Sbjct: 465 ERRELLRSLFVEIPNRFTWVKSIDAFPSDSDAVLNFFNDALQVKCEGIMVKVLDDKPVDL 524
Query: 623 -------------------------------------------ATYEPSKRSLNWLKLKK 639
+TYEP KR +WLK+KK
Sbjct: 525 PLQVEDTATALGDGELLPPEEDQQQEPTDTTEKQRGNRKRPLLSTYEPDKRLESWLKVKK 584
Query: 640 DYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE- 698
DY S ++LDL+PIAA+HG+G++ + LLA + +++ K +GF++ E
Sbjct: 585 DYSAS-SETLDLIPIAAWHGQGRKAKWWSPILLAVRNPETGSLEAVTKCMSGFTDKFYEA 643
Query: 699 --ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
E+ + +I +P Y + P+VWF+P E
Sbjct: 644 NKEKYAEGSDNIISRPS-YVEYCG--EPEVWFQPQE 676
>gi|119872622|ref|YP_930629.1| ATP-dependent DNA ligase [Pyrobaculum islandicum DSM 4184]
gi|166215377|sp|A1RTK4.1|DNLI_PYRIL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|119674030|gb|ABL88286.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum islandicum DSM 4184]
Length = 584
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 191/575 (33%), Positives = 301/575 (52%), Gaps = 46/575 (8%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
+ + T R + ++ ++ + + PE++ ++Y + P EG+ELG+ + ++A+
Sbjct: 13 VESTTQRTTMVKLLTSLFK---KARPEEIDKIIYFVLGDLRPPWEGVELGVAEKLCLRAV 69
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD--------PLTITKVFDTFRL 314
++A G + S ++ Y++ GD+G +A+R + S ++P PL +++V+DT
Sbjct: 70 SKATGVSISELEALYKKTGDVG---EAARKALSTAKRPGLLAFGQQKPLEVSEVYDTLLK 126
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+A+ +G+ +Q+ K + + +L A+ E +Y+ R + KLR+G+A+ TL+ AL A +
Sbjct: 127 VAQASGEGAQDMKISLLASLFAKASPEEAKYIARFVVGKLRLGVADMTLIEALSDAFGVD 186
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
++ + +I L K+ + V P+ E TPG+P+ P
Sbjct: 187 KEALERAYHIYPDL---GKLARHVAEGRPLEE-----------------IKITPGVPVLP 226
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLA+ SEI+ K CEYKYDGERAQIH L++G V+I+SR E T +PDVV
Sbjct: 227 MLAQRLSSSSEILAKLGGSAI-CEYKYDGERAQIH-LKEGVVKIFSRRLEDITHAYPDVV 284
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN-VSLSDIKVDVCIYAFD 553
AV + S R +L+ EIVA D + +LPFQ L R RK+ V+++ V + FD
Sbjct: 285 KAVR--EAVSAREAILEGEIVAIDPDTGDMLPFQELMHRKRKHEVAVAVEMYPVVLNLFD 342
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEG 613
+LY +G+ L E L RR L + +E A D +EI F AV EG
Sbjct: 343 LLYIDGEDLTNEPLIYRRVRLSEVVQETEKV-SIAKWRVFDDAEEIDVFFHEAVSLGMEG 401
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
L+ K+ + YE R NW+K K+DY + D++DLV + AF+GRGKR G+YGAFLLA
Sbjct: 402 LVCKS--PTSVYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLA 459
Query: 674 CYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTER 733
YD + F ++CK+G+GF++A L++ L+ IP P R + PDVWF P
Sbjct: 460 AYDPATDMFYTVCKVGSGFTDADLKKMYEMLQPYKIPHRHP--RVVSKMEPDVWFTPQVV 517
Query: 734 PETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
E A I TC + P RF R
Sbjct: 518 IEVIG--AEITLSPLHTCCLGAVKPGVGLAIRFPR 550
>gi|320588869|gb|EFX01337.1| DNA ligase [Grosmannia clavigera kw1407]
Length = 905
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 177/502 (35%), Positives = 269/502 (53%), Gaps = 29/502 (5%)
Query: 144 PKKRKVNVNSVSA--KEKIAELKSNIVLLKKKAGEFDPKMVACWE-KGERVPFIFLSLVF 200
PK +++ SVS E A L + L + ++ K+ W +G P+ L+ F
Sbjct: 139 PKNGTLSLQSVSTVEDEMTASLPLDQSPLVFEPAKYTAKLQQSWAAEGGGAPYALLTRCF 198
Query: 201 DMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIK 260
++S RI I D + N LR ++E P L+P V+LA N I+P + ELG+G ++I K
Sbjct: 199 VLVSGTQSRIKIVDTLVNCLRLLIEGDPGSLLPAVWLATNSISPPYVSRELGLGGSAISK 258
Query: 261 ALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEA 319
AL + CG ++ + + GD G VA ++ Q+ +R+P PLTI V+ +
Sbjct: 259 ALKQVCGLDGRSLRTLFHKHGDPGDVAYEAKKKQAFTLRRPRPLTIQGVYQALCKVTDSQ 318
Query: 320 GKDSQEKKKNRIKALLVAATDC-EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHS 378
G S E K+ + LL A E ++++R L LRIG + T+L AL +A + S
Sbjct: 319 GPGSVEAKQRIVDRLLQDARGGDESRFIVRTLCQHLRIGAVKTTMLIALSRAFLL----S 374
Query: 379 KPPP---NIQSPLE--------------EAAKIVKQVFSVLPVYEKIVPALLTDGVWN-L 420
+PP + +S E + +IVK F+ P Y+ +V A+L G+ L
Sbjct: 375 RPPGAEFSTRSVAELTRLKKEELAEVHGRSEEIVKACFARRPNYDDLVEAMLEMGISEAL 434
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
C +P+ PML T+ + E++ + Q F CE+KYDG+RAQ+H G V I+S
Sbjct: 435 LQRCGLELHVPLRPMLGAITRHLGEMLARLQGRPFACEFKYDGQRAQVHCDTAGRVSIFS 494
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
R+ ER T K+PD+V V +++ V SF+L+ E+VA DR+ + FQTL+ RARK+V++
Sbjct: 495 RHLERMTDKYPDLVSLVPQIRGAGVGSFILEGEVVAVDRQTGALRSFQTLANRARKDVAV 554
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDE 598
I VDVC++AFD++ NGQPLL R RRE L F E P F+ ++ TS D D
Sbjct: 555 GSITVDVCLFAFDLMLLNGQPLLDRPFRERRELLRSLFVEMPHHFRCVESMDATSEDGDA 614
Query: 599 IQKFLDAAVDASCEGLIIKTMD 620
I F A D CEG+++K +D
Sbjct: 615 ISAFFKRATDIKCEGIMVKILD 636
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
ATYEP +R +WLK+KKDY S ++LDL+P+AA+HG G++ + L+A +
Sbjct: 695 ATYEPDRRLDSWLKVKKDY-GSTHETLDLIPVAAWHGMGRKAKWWSPILMAVRNEETGSL 753
Query: 683 QSICKIGTGFSEAM 696
+++ K +GF++A
Sbjct: 754 EAVTKCMSGFTDAF 767
>gi|170289998|ref|YP_001736814.1| ATP-dependent DNA ligase I [Candidatus Korarchaeum cryptofilum
OPF8]
gi|224487898|sp|B1L3V2.1|DNLI2_KORCO RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|170174078|gb|ACB07131.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 594
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 292/543 (53%), Gaps = 31/543 (5%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
FI ++ +++ I TGR+ + D + N+ + T PE L +VYL IA + EG+ELG
Sbjct: 3 FIDVAKIYEKIEATTGRLEMIDYLKNLF---LSTPPEILDKIVYLTLGNIAASFEGIELG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAK---ASRSSQSMMRKPDPLTITKVF 309
+G+ ++AL+ A G + ++++Y ++GD+G +A+ + +++QS + LT+ +VF
Sbjct: 60 VGEKLFLRALSLATGIPQERLEEEYPKLGDIGKLAEWAVSKKAAQSFF--TEDLTVERVF 117
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
DT +A+ G+ +Q+ K I +L A E +Y+ R++ KLR+G+ + T+L AL +
Sbjct: 118 DTLSKVARATGEGAQDLKVRLIAGILSDAKPLEARYIARIVTEKLRLGVRDMTVLDALSE 177
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + + +++ +++ P KI + G+ L + + T G
Sbjct: 178 AFLKGRAYRDK--------------LERKYNIYPDIGKIAKVVAEKGIKGL-DEITITLG 222
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PMLA+ + EI+ K F E+KYDGER QIH +DG V+I+SR E T
Sbjct: 223 IPVRPMLAQRLRSAEEIMEKIGPRIF-AEFKYDGERMQIHVWKDGKVKIFSRRLEDITEP 281
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV-DVC 548
+PDV VS K VLDCE VA + + +ILPFQ L R RK +K
Sbjct: 282 YPDVREYVS--KAVEGHEVVLDCETVAINPDTGEILPFQELMHRRRKYGVEEAMKTYPTV 339
Query: 549 IYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVD 608
YAFD+LY +G+ LL EQL RR+ L + +E +++E+++F + AV+
Sbjct: 340 TYAFDLLYLDGRELLDEQLDDRRKILKEILKENEKARLVQYEEIDGNVEELERFFEHAVE 399
Query: 609 ASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
EGL++K D + Y+ R +W+KLK+ YI + + +DLV + AF G+GKR G YG
Sbjct: 400 MGTEGLVVK--DPKSIYQAGVRGWSWIKLKRSYISKMIEPVDLVVVGAFWGKGKRAGTYG 457
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
A L+A Y + F+++CK+G+GF++ L L I P I DV+F
Sbjct: 458 ALLMAAYSPEEDVFKTVCKMGSGFTDEELARMPKLLEDYKIDHKHP--SVISNIEADVYF 515
Query: 729 EPT 731
P
Sbjct: 516 VPV 518
>gi|145590341|ref|YP_001152343.1| ATP-dependent DNA ligase [Pyrobaculum arsenaticum DSM 13514]
gi|166215375|sp|A4WH24.1|DNLI_PYRAR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|145282109|gb|ABP49691.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum arsenaticum DSM
13514]
Length = 584
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 190/575 (33%), Positives = 301/575 (52%), Gaps = 46/575 (8%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
+ + T R ++ ++ ++ + + PE++ V+YL + P EGLELG+G+ ++AL
Sbjct: 13 VESTTQRSVMVKLLASLFKKAL---PEEIDKVIYLILGDLRPPWEGLELGVGEKLCLRAL 69
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD--------PLTITKVFDTFRL 314
A+A G +++ ++ Y++ GD+G +A+R + + ++P PL +++V+D
Sbjct: 70 AKATGTSQAELESMYKKTGDIG---EAARRALASSKRPGLLAFGSQKPLEVSEVYDALIK 126
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+A+ G+ +Q+ K + +L ++ E +Y+ R + KLR+G+A+ T++ AL A
Sbjct: 127 VARATGEGAQDMKIALLSSLFARSSPEEGKYIARFVVGKLRLGVADMTIIEALADAYGVR 186
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
++ + ++ L AK+V S P+ + TPG+P+ P
Sbjct: 187 KEDLERAYHVYPDLGHLAKLVA---SGKPL-----------------DEVKVTPGVPVLP 226
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLA+ SEI+ K CEYKYDGERAQIH + G V I+SR E T +PDVV
Sbjct: 227 MLAQRLSSSSEILAKLGGAAI-CEYKYDGERAQIHISQSG-VRIFSRRLEDITHAYPDVV 284
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV-DVCIYAFD 553
AV + S R +L+ EIVA D + ++LPFQ L R RK+ + +++ +Y FD
Sbjct: 285 KAVR--EAVSAREAILEGEIVAVDPDTGEMLPFQELMHRKRKHEVAAAMEMYPTVLYLFD 342
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEG 613
I+Y +G+ L E L RR L + E Q A D D + F AV EG
Sbjct: 343 IVYVDGEDLTNEPLIYRRVKLSEIVHESDKV-QIAKWQMFDDPDTVDVFFHEAVSVGTEG 401
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
LI K+ + YE R NW+K K+DY + D++DLV + AF+GRGKR G+YGAFLLA
Sbjct: 402 LICKSPTSE--YEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLA 459
Query: 674 CYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTER 733
YD +++ F ++CK+G+GF++A L++ L+ IP P R + + DVWF P
Sbjct: 460 AYDPSSDMFYTVCKVGSGFTDADLKKMYEILQPLKIPHRHP--RVSSKMEADVWFVPQVV 517
Query: 734 PETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
E A I TC + P RF R
Sbjct: 518 IEVIG--AEITLSPLHTCCLGAVRPGVGLAVRFPR 550
>gi|386875694|ref|ZP_10117853.1| ATP-dependent DNA ligase domain protein [Candidatus Nitrosopumilus
salaria BD31]
gi|386806450|gb|EIJ65910.1| ATP-dependent DNA ligase domain protein [Candidatus Nitrosopumilus
salaria BD31]
Length = 588
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 283/521 (54%), Gaps = 33/521 (6%)
Query: 216 VCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVK 274
+ L + E TPED++ +VYL K+ P EG+ELG+ + I++++++ G ++
Sbjct: 22 LTQYLVELFEKTPEDIISKIVYLLQGKLRPDFEGIELGVAEKLAIRSISKSSGIPVKRIE 81
Query: 275 KQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
++Y+E GDLG A + +Q+ D +TI +V++T IA G SQ+ K I
Sbjct: 82 EEYRESGDLGHAASTILEQKTQTTFLVED-ITIERVYETLFKIANLEGSHSQDMKMKYIS 140
Query: 333 ALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAA 392
+LL AT E Y++++L LR+G+AE T++ AL N+ + K
Sbjct: 141 SLLNDATPLEASYILKILLGTLRLGIAENTVMDALAITFSGNKDNRK------------- 187
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWNLS--NTCSFTPGIPIGPMLAKPTKGVSEIVNKF 450
I++ ++V K+ + T G+ + F P I PMLA K E + K
Sbjct: 188 -ILQHAYNVSSDLGKVAETIATKGLEGVEKFEIILFNP---IRPMLADRVKSEKEAIEKM 243
Query: 451 QDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
+ EF EYK DGER Q+H +E V ++SR+ E + +PD++ + ++ + + +L
Sbjct: 244 GN-EFAAEYKLDGERVQLH-IEGEKVVLFSRSLENISSYYPDIIEKIPKVIQGD--NIIL 299
Query: 511 DCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
+ EIVA + + LPFQ L R RK + + K + + FDILY NG+ L+ + +
Sbjct: 300 EAEIVAINENTGEFLPFQELMHRRRKYKIEKAVTKYPITVNFFDILYHNGRSCLELRYKE 359
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSK 629
RRE L + E F ++ + +EI +F++ +++A EGL++K +D+ Y+
Sbjct: 360 RREKLEKNITENE-FVKYIPMCIVRNENEITEFMENSINAGSEGLMLKMLDK--PYQAGS 416
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
R +WLKLK++Y +GDSLDLV I + G+G+RTG YG LLA YD +++EF SICK+G
Sbjct: 417 RGSHWLKLKREYQNELGDSLDLVVIGGYFGKGRRTGNYGTLLLATYDEDDDEFTSICKVG 476
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
TGFS+ L++ L KV K P R + DVWFEP
Sbjct: 477 TGFSDEDLDQLFQILHPKVTIKKNP--RINSEMEADVWFEP 515
>gi|159041690|ref|YP_001540942.1| ATP-dependent DNA ligase [Caldivirga maquilingensis IC-167]
gi|224487902|sp|A8MDU6.1|DNLI_CALMQ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|157920525|gb|ABW01952.1| DNA ligase I, ATP-dependent Dnl1 [Caldivirga maquilingensis IC-167]
Length = 603
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 287/547 (52%), Gaps = 44/547 (8%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
V ++ T R ++ + ++L +T P+ + V+Y + P EG+ELG+ +
Sbjct: 13 VLKLVEATTQRTVMAKALSSLL---AKTPPQVIDKVIYFLLGSLRPDWEGVELGLAERLT 69
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP--------------LT 304
++A++ A G V++ Y+++GD G VAK R+++ K LT
Sbjct: 70 LRAISMATGLPIRQVEELYKKLGDAGEVAK--RAAEIKRSKGGGGTIFDFIDTGPKRRLT 127
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I+KV+DT IAK +G+ +Q+ K + +LL A E +Y+ R + +LR+G+A+ T+L
Sbjct: 128 ISKVYDTLMAIAKASGEGAQDTKVKLLSSLLTDAEPDEAKYITRFVIGRLRLGVADMTIL 187
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
AL A N ++++ + V P KI L +G
Sbjct: 188 DALSDAFDVNRD-----------------LLEKAYHVYPDLGKIAKTL-AEGGEEAVKAI 229
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
TPG+PI PMLA+ EI+NK + CE+KYDGER QIH L+DG+V+I+SR E
Sbjct: 230 KVTPGVPIQPMLAERLSSPKEILNKLGGVAI-CEFKYDGERMQIHKLKDGTVKIFSRRME 288
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDI 543
T ++PDV A + F+++ E VA D + + PFQ L R RK N+ +
Sbjct: 289 DITNQYPDV--AEYAREAIDAEEFIVEGEGVAIDPDTGEFKPFQELMHRKRKHNIKEAIE 346
Query: 544 KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFL 603
+ + +Y FD++Y NGQ L L R++ L+ S + A + + D D ++KF
Sbjct: 347 EYPINLYLFDVMYVNGQDLTDLPLPDRKKVLF-SIIKPHEHVHHADWIITDDADSLEKFF 405
Query: 604 DAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
A+ + CEG++ K++ + YE R W+K K+DY + D++DLV + AF GRGKR
Sbjct: 406 LDAISSGCEGVMCKSVKLGSVYEMGARGWLWIKYKRDYKSELSDTMDLVVVGAFWGRGKR 465
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTIS 723
G YGA LLA YD ++++F ++CK+G+GF++ L++ L IP P R +
Sbjct: 466 AGTYGALLLAAYDPDSDQFYTVCKVGSGFTDEDLKKLPQMLEPYKIPHRHP--RVVSKME 523
Query: 724 PDVWFEP 730
PD+WF P
Sbjct: 524 PDIWFTP 530
>gi|171184553|ref|YP_001793472.1| ATP-dependent DNA ligase [Pyrobaculum neutrophilum V24Sta]
gi|224487911|sp|B1YA52.1|DNLI_THENV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|170933765|gb|ACB39026.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum neutrophilum V24Sta]
Length = 584
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 295/583 (50%), Gaps = 62/583 (10%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
+ + T R + ++ ++L+ P+++ +VY + P EG+ELG+ + ++A+
Sbjct: 13 VESTTQRTTMVKLLTSLLK---RARPDEVDKIVYFVLGDLKPPWEGVELGVAEKLCLRAV 69
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD--------PLTITKVFDTFRL 314
++A G S ++ Y+ GD+G +A+R + S ++P PL +++V+DT
Sbjct: 70 SKAAGTPLSELEAVYKRTGDVG---EAARRALSAAKRPGLLAFGQQKPLEVSEVYDTLLK 126
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL------G 368
+AK AG+ +Q+ K + + +L AT E +Y+ R + KLR+G+A+ TLL AL G
Sbjct: 127 VAKAAGEGAQDMKISLLASLFARATPEEAKYIARFVVGKLRLGVADMTLLEALSEAFGVG 186
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
+ A+ H P + K+ + V P+ E TP
Sbjct: 187 KEALERAYHVWP---------DMGKLARHVAEGRPLEE-----------------VKITP 220
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
G+P+ PMLA+ SEI+ K CEYKYDGERAQIH + GSV+I+SR E T
Sbjct: 221 GVPVLPMLAQRLSSASEILAKLGGAA-VCEYKYDGERAQIH-ISGGSVKIFSRRLEDITH 278
Query: 489 KFPDVVLAVSRLKKPSVRS--FVLDCEIVAYDREKQKILPFQTLSTRARKN-VSLSDIKV 545
+PDVV AV K SV + +L+ EIVA D + +LPFQ L R RK+ V+ +
Sbjct: 279 AYPDVVKAV----KESVAAGEAILEGEIVAVDPDTGDMLPFQELMHRKRKHEVAAAVESY 334
Query: 546 DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDA 605
+ FD+LY +G+ L E L RR L + E A D E+ F
Sbjct: 335 PAVLNLFDVLYLDGEDLTGEPLIYRRLRLSEVVHETEKV-SIARWRLFDDPGEVDVFFHE 393
Query: 606 AVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
AV EGL+ K+ + YE R NW+K K+DY + D++DLV + AF+GRGKR G
Sbjct: 394 AVSLGMEGLVCKS--PTSIYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAG 451
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
+YGAFLLA YD + F ++CK+G+GF++A L++ L+ IP P R ++PD
Sbjct: 452 LYGAFLLAAYDPQTDMFYTVCKVGSGFTDADLKKMYEVLQPYKIPHRHP--RVVSKMTPD 509
Query: 726 VWFEPTERPETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
VWF P E A I TC + P RF R
Sbjct: 510 VWFTPQVVIEVIG--AEITLSPLHTCCLGAVRPGVGLAIRFPR 550
>gi|48477744|ref|YP_023450.1| ATP-dependent DNA ligase [Picrophilus torridus DSM 9790]
gi|48430392|gb|AAT43257.1| DNA ligase [Picrophilus torridus DSM 9790]
Length = 590
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 291/537 (54%), Gaps = 34/537 (6%)
Query: 200 FDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASII 259
F + T R+ +T I+ + + + +DL +VYL K+ P + G+ELG+ D II
Sbjct: 15 FSRMEETTKRLELTSILAELFKR----SGDDLKKLVYLVQGKLMPDYLGIELGLSDKLII 70
Query: 260 KALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP---DPLTITKVFDTFRLIA 316
K+L++A GR+E + + + +GDLG + A S S +++P + LT+ V++ I+
Sbjct: 71 KSLSKASGRSEEDINRIFSRLGDLG--STAEEISSSGIQRPLLKESLTVDYVYNQLIKIS 128
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
G S + K + LL+ + E +Y+ R++ KLR+G+A+ T+L L +A ++E+
Sbjct: 129 GYTGHGSIKTKMDAYIDLLINSGPMEIKYITRIITGKLRLGVADSTILDGLIEA--FSEK 186
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
+ A ++ ++ P I L+ + L N P IP ML
Sbjct: 187 -------------KYADDIETAYNFHPDLGYIAENLMMGNINELLNAGP-VPLIPFKVML 232
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
A+ + +S+I NK + EYKYDG R Q+H+L+ G ++I+SR E T FPD+V
Sbjct: 233 AERLQSISDIRNKMGH-NASYEYKYDGLRTQLHFLK-GGIKIFSRGLEETTSSFPDIVQN 290
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDI 554
S S ++D E V Y+ E ++ PFQ +S R + L++ +V + ++ FDI
Sbjct: 291 FKSYY--SFDSCIIDGESVPYNPETGELYPFQMVSKRRGRKYELTEKTREVPIVMFIFDI 348
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGL 614
LY NG+ L+ RR L +F+E +F+ A + S D +I KF + +++ CEG+
Sbjct: 349 LYLNGKSLVNLPYPERRSILEKNFKENE-YFKLAKRIVSDDEHDIMKFFERSIEEGCEGI 407
Query: 615 IIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLAC 674
+ K+ D+ Y R W+K K+DY + DSLDLV + AF G G+R G +GA LLAC
Sbjct: 408 VAKSNGIDSIYRAGARGWLWIKFKRDYQSELSDSLDLVVVGAFDGHGRRKGTFGALLLAC 467
Query: 675 YDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
Y+S ++ F+++CK+G+GF++ ML E L K++ K +P R ++ PD W P+
Sbjct: 468 YNSKDDTFETVCKLGSGFTDEMLSEMPRLLGDKIVEK-KP-ARVNSSMEPDHWIYPS 522
>gi|224471824|sp|Q6L195.2|DNLI_PICTO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
Length = 585
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 291/537 (54%), Gaps = 34/537 (6%)
Query: 200 FDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASII 259
F + T R+ +T I+ + + + +DL +VYL K+ P + G+ELG+ D II
Sbjct: 10 FSRMEETTKRLELTSILAELFKR----SGDDLKKLVYLVQGKLMPDYLGIELGLSDKLII 65
Query: 260 KALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP---DPLTITKVFDTFRLIA 316
K+L++A GR+E + + + +GDLG + A S S +++P + LT+ V++ I+
Sbjct: 66 KSLSKASGRSEEDINRIFSRLGDLG--STAEEISSSGIQRPLLKESLTVDYVYNQLIKIS 123
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
G S + K + LL+ + E +Y+ R++ KLR+G+A+ T+L L +A ++E+
Sbjct: 124 GYTGHGSIKTKMDAYIDLLINSGPMEIKYITRIITGKLRLGVADSTILDGLIEA--FSEK 181
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
+ A ++ ++ P I L+ + L N P IP ML
Sbjct: 182 -------------KYADDIETAYNFHPDLGYIAENLMMGNINELLNAGP-VPLIPFKVML 227
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
A+ + +S+I NK + EYKYDG R Q+H+L+ G ++I+SR E T FPD+V
Sbjct: 228 AERLQSISDIRNKMGH-NASYEYKYDGLRTQLHFLK-GGIKIFSRGLEETTSSFPDIVQN 285
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDI 554
S S ++D E V Y+ E ++ PFQ +S R + L++ +V + ++ FDI
Sbjct: 286 FKSYY--SFDSCIIDGESVPYNPETGELYPFQMVSKRRGRKYELTEKTREVPIVMFIFDI 343
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGL 614
LY NG+ L+ RR L +F+E +F+ A + S D +I KF + +++ CEG+
Sbjct: 344 LYLNGKSLVNLPYPERRSILEKNFKENE-YFKLAKRIVSDDEHDIMKFFERSIEEGCEGI 402
Query: 615 IIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLAC 674
+ K+ D+ Y R W+K K+DY + DSLDLV + AF G G+R G +GA LLAC
Sbjct: 403 VAKSNGIDSIYRAGARGWLWIKFKRDYQSELSDSLDLVVVGAFDGHGRRKGTFGALLLAC 462
Query: 675 YDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
Y+S ++ F+++CK+G+GF++ ML E L K++ K +P R ++ PD W P+
Sbjct: 463 YNSKDDTFETVCKLGSGFTDEMLSEMPRLLGDKIVEK-KP-ARVNSSMEPDHWIYPS 517
>gi|352683054|ref|YP_004893578.1| DNA ligase [Thermoproteus tenax Kra 1]
gi|350275853|emb|CCC82500.1| DNA ligase [Thermoproteus tenax Kra 1]
Length = 592
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 193/584 (33%), Positives = 298/584 (51%), Gaps = 40/584 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F L+ V I + T R ++ ++ N+ + + P+++ +Y+ + P EG+ELG
Sbjct: 3 FSELAKVLAGIESTTQRTMMVKLLVNLFKKL---GPDEIDKAIYIILGDVRPPWEGVELG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAK---ASRSSQSMMR----KPDPLTI 305
I + ++AL+ A G ++ YQ+ GD+G A+ + R +Q+++ K PL+I
Sbjct: 60 IAEKLCLRALSRASGVKLEELESLYQKTGDVGEAARKALSKRQAQTLLAFAGAKRAPLSI 119
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
++V+DTF IA+ G+ S + K + + +L A+ E +Y+ R + KLR+G+A+ T++
Sbjct: 120 SQVYDTFLKIARTTGEGSIDLKVSLLSSLFSQASPEEAKYIARFVVGKLRLGVADMTIID 179
Query: 366 ALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCS 425
AL +A +E + NI L AK+V L G L+
Sbjct: 180 ALAEAFNVDEGQLEKAYNIHPDLGYLAKVV-----------------LERGQAGLAQV-R 221
Query: 426 FTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAER 485
TPG+P+ PMLA+ E++ K CEYKYDGERAQIH +G + IYSR E
Sbjct: 222 VTPGVPVMPMLAQRLSTSHEVLTKLGGAAI-CEYKYDGERAQIHIGPNG-ISIYSRRLEN 279
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN-VSLSDIK 544
T +PDVV AV R S + +++ EIVA D + ILPFQ L R RK+ V + +
Sbjct: 280 ITHAYPDVVEAVRR--SVSAKEAIIEGEIVALDPDTGDILPFQELMHRKRKHEVEEAMRE 337
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
V + FD++Y +G+ L + L RR L + E L D +++ F
Sbjct: 338 YPVKLNLFDVIYLDGEDLTDKPLIYRRLKLSEIVRESEDVVIAKWALFD-DEEKVDLFFH 396
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A+ EGL+ K+ + YE R NW+K K+DY + D++DLV + AF+GRGKR
Sbjct: 397 EAISMGMEGLVCKS--PTSLYEMGARGWNWIKYKRDYRSEMSDTVDLVVVGAFYGRGKRA 454
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
G+YGAFL+A YD + F ++CK+G+GF++A L++ L I P R + + P
Sbjct: 455 GLYGAFLMAAYDPKTDMFYTVCKVGSGFTDADLKKMYQMLEPYKIDHRHP--RVSSRMEP 512
Query: 725 DVWFEPTERPETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
DVWF P E A I TC + P RF R
Sbjct: 513 DVWFTPGIVLEIIG--AEITLSPLHTCCQGAIKPDVGLAIRFPR 554
>gi|13542068|ref|NP_111756.1| ATP-dependent DNA ligase [Thermoplasma volcanium GSS1]
gi|21263560|sp|Q979A1.1|DNLI_THEVO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|14325499|dbj|BAB60403.1| DNA ligase [Thermoplasma volcanium GSS1]
Length = 588
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 295/550 (53%), Gaps = 42/550 (7%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+ F ++ F+ +S T R +T+I+ +L++ EDL +VYL K+AP ++G+E
Sbjct: 1 MKFSLVTDAFEKMSKTTKRTELTEILVELLKS----ADEDLQSLVYLIEGKLAPDYQGIE 56
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAK---ASRSSQSMMRKPDPLTITK 307
+ D IIKAL+ E V + Y ++GD+G VA+ A ++ +S++ + LT+
Sbjct: 57 TQMSDKLIIKALSIVSNIPEEAVSETYSKLGDIGSVAREIAAKKNMRSLVN--EDLTVKY 114
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
V DT +AK +G S + + + L ++ T + Y+ R++ KLRIG+++ T+L A+
Sbjct: 115 VHDTLMRMAKTSGSGSTKARIDAYVDLALSGTPADLMYITRIITGKLRIGVSDATILDAI 174
Query: 368 GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF- 426
A +E++S+ N + + I Q+ + NL + +
Sbjct: 175 -ILAFSDEKYSEEIENAYNFHPDLGYIAVQL-----------------RLGNLESVINMG 216
Query: 427 -TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC--EYKYDGERAQIHYLEDGSVEIYSRNA 483
TP +P MLA+ + V EIV K M C EYKYDG R +IH + D V ++SR
Sbjct: 217 PTPMVPFKVMLAERLRSVDEIVQK---MNGKCAFEYKYDGMRTEIHIV-DEKVRLFSRGN 272
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E TG+FPD+V + + V S +LD E V Y+ E ++ PFQ +S R + L +
Sbjct: 273 EETTGQFPDIVKSAK--ETFHVSSVILDGEAVPYNPETGELYPFQVISQRRGRKYDLDKV 330
Query: 544 --KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
++ + ++ FDI+Y NG+ L + RR L F+E F + A + S D I K
Sbjct: 331 SNEIPITVFLFDIVYINGKDLSKTPYAERRRILEGLFKENDNF-KLAKRIVSSDTGTITK 389
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
F + A++ CEGL+ K+M D+ Y+ R W+KLK+DY + D++DL + AF G G
Sbjct: 390 FFNQAIEDGCEGLVAKSMADDSYYKAGARGWLWIKLKRDYQAQLWDTIDLTVVGAFMGHG 449
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT 721
+R+G YGA LLA Y+ N+ F+++CK+G+GF++ +L ++ + K +P R T
Sbjct: 450 RRSGTYGALLLATYNEKNDTFETVCKLGSGFTDDVLFSLPKRF-AEFVSKEKP-ARVVST 507
Query: 722 ISPDVWFEPT 731
I PDVW P+
Sbjct: 508 IEPDVWIYPS 517
>gi|387596776|gb|EIJ94397.1| DNA ligase [Nematocida parisii ERTm1]
Length = 499
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 168/455 (36%), Positives = 265/455 (58%), Gaps = 40/455 (8%)
Query: 319 AGKDSQEKKKNRIKALLV-AATDCEPQYLIRLLQSKLRIGLAEQTLLAALG--------- 368
GKDS +K +I LL + D E +Y+IR++ K++IGL+ Q++L LG
Sbjct: 2 TGKDSTAQKVQKIAELLTRCSVDEEIKYIIRIIDGKMKIGLSTQSILCGLGLSFKERFGL 61
Query: 369 ----QAAVYNEQHSK--PPPNIQSP----LEEAAKI---VKQVFSVLPVYEKIVPALLTD 415
+ +++ ++ K N+ S ++ K+ +K+ ++ LP +EKI+ + ++
Sbjct: 62 KNSEKTVIFDSENGKIQTENNLCSNQIEWTDDENKVMEDIKEAYAQLPSFEKIIKNVFSN 121
Query: 416 GVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS 475
G+ +LS+ TPG P+ PMLA P K + +F+ E+ EYKYDGER Q HY +G
Sbjct: 122 GISSLSSDL-ITPGYPLRPMLAIPEKSPETVSARFKS-EYLVEYKYDGERVQAHYF-NGK 178
Query: 476 VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
+E++SR E T +F ++ ++ + K SF++D E+VAY R+ QKIL FQTLS R R
Sbjct: 179 IELFSRGLESTTERFNQLIDSLKKSNKTG-ESFIIDAEVVAYCRDTQKILSFQTLSNRKR 237
Query: 536 K----NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG--FFQFAT 589
K N S+ D+ ++ FDILY G+PL + +R R++ L +SF + G F +
Sbjct: 238 KFTESNAGKSE--SDIALFIFDILYL-GRPLNKMSIRERKKILNESFTQIKGEIFIAESF 294
Query: 590 TLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDS 648
+ DL+ + K ++ + CEG+++K+ D D+ YEPSKRS W+KLK DYI + ++
Sbjct: 295 MFCTNDLERLNKIFSDSLASGCEGVMVKSADETDSGYEPSKRSQKWVKLKSDYITGLFET 354
Query: 649 LDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
LDL+ I + G+GKRTGVYG FLL C + N ++I KIGTGFSEA+LE+ S L+S +
Sbjct: 355 LDLLVIGGYTGKGKRTGVYGGFLLGCLNENG-VVETITKIGTGFSEAVLEDLSKELKSCI 413
Query: 709 IPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ + +T PDVWF+P E + + S+
Sbjct: 414 TTEAQTEISIQNT--PDVWFKPVTVWEVAAAGFSV 446
>gi|118431328|ref|NP_147713.2| ATP-dependent DNA ligase [Aeropyrum pernix K1]
gi|14423680|sp|Q9YD18.2|DNLI_AERPE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|116062651|dbj|BAA80079.2| ADP-dependent DNA ligase [Aeropyrum pernix K1]
Length = 602
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 187/558 (33%), Positives = 293/558 (52%), Gaps = 40/558 (7%)
Query: 226 TTPEDLVPVVYLAANKIAPAHEGL-ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLG 284
T P + VVYL K+ P +GL ELG+G+ ++KA+A A TE V++ Y+ +GDLG
Sbjct: 33 TPPGAIGIVVYLIQGKLGPDWKGLPELGVGEKLLVKAIALAYKATEERVERLYKSVGDLG 92
Query: 285 LVAKA------SRSSQS------MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
VA+ SR++++ M + LT+ +V++T IA G+ S++ K +
Sbjct: 93 SVAERLSREYRSRAARAVTLEAFMAGGGEALTVRRVYNTLYRIAMAQGEGSRDIKLRLLA 152
Query: 333 ALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAA 392
LL A E +Y++R ++ +LR+G+ + T+L AL A H++P
Sbjct: 153 GLLADAEPVEAKYIVRFVEGRLRVGVGDATVLDALAMA-FGGGAHARP------------ 199
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
++++ +++ I + +GV L G+PI PMLA+ + +EI+ K
Sbjct: 200 -VIERAYNLRADLGYIAEVVAREGVDALRGVKPQV-GVPIRPMLAERGRDPAEILRKVGG 257
Query: 453 MEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSFVLD 511
EYKYDGERAQIH +DG V IYSR E T FPDVV +A LK +++
Sbjct: 258 -RAVVEYKYDGERAQIHK-KDGEVYIYSRRLENITRMFPDVVEMARKGLKAGEA---IVE 312
Query: 512 CEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
EIVA D + +I PFQ L R RK ++ +V V ++ FD LY +G+ L + L R
Sbjct: 313 GEIVAVDPDNYEIQPFQVLMQRKRKHDIHRVMREVPVAVFLFDALYVDGEDLTSKPLPER 372
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKR 630
R L + E P ++ A ++ + D +E+ F A++ EG+++K + RD+ Y R
Sbjct: 373 RRRLKEIVVETP-LWRLAESIETSDPEELWTFFLKAIEEGAEGVMVKAVHRDSVYTAGVR 431
Query: 631 SLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGT 690
W+KLK+DY + D++DLV + AF+GRGKR G + L+A YD + + F ++CK+ T
Sbjct: 432 GWLWVKLKRDYKSEMMDTVDLVVVGAFYGRGKRGGKLSSLLMAAYDPDRDVFPTVCKVAT 491
Query: 691 GFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASIVYDSQIT 750
GF++ L+ + L+ +IP+ P R I PDVW EP E A + T
Sbjct: 492 GFTDEELDRMNEMLKKHIIPRKHP--RVESRIEPDVWVEPALVAEILG--AELTLSPMHT 547
Query: 751 CLPSSYMPFSRSYFRFGR 768
C ++ P RF R
Sbjct: 548 CCLNTVRPGVGISIRFPR 565
>gi|408404830|ref|YP_006862813.1| DNA ligase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408365426|gb|AFU59156.1| DNA ligase [Candidatus Nitrososphaera gargensis Ga9.2]
Length = 597
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 297/564 (52%), Gaps = 50/564 (8%)
Query: 200 FDMISNETGRILITDIVCNMLRTVMETTPEDLV-PVVYLAANKIAPAHEGLELGIGDASI 258
F+ + + R+ +T+ + +LR TP D++ V YL K+ P +EG+ELG+ + +
Sbjct: 10 FEQMEQTSSRLALTEYLVALLRK----TPPDIIDKVTYLIQGKLYPDYEGIELGVAERMV 65
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVA-KASRSSQSMMRKPDPLTITKVFDTFRLIAK 317
I+A+A + G+ + ++K YQ+ GDLG A +A +S +P+T+ +V+ TF +A+
Sbjct: 66 IRAIASSSGKDQLQIEKLYQKTGDLGDAAGEAMKSKSQSTLFSEPMTVERVYSTFDRVAR 125
Query: 318 EAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV---YN 374
G SQE K I +LL AT E +Y+I+ + +LR+G+A+ T+L AL A N
Sbjct: 126 TTGPGSQETKLRLISSLLNDATAAEGRYIIKFVMGQLRLGIADYTVLDALAVAFTGDKAN 185
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
Q + N+ S L A++ L T G+ + + T PI P
Sbjct: 186 RQVLENAYNVSSDLGTVARL-----------------LATKGL-DAVKSIKITLFKPIRP 227
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLA+ + E + + + + EYK DGER Q+H + +VE++SR E+ T +PDV
Sbjct: 228 MLAERIRTAEEALERMEG-KAAVEYKLDGERVQLHKGKQ-NVELFSRRLEKITSHYPDVA 285
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFD 553
A+ +K +L+ E+VA + E LPFQ L R RK V + V + FD
Sbjct: 286 EAIKSIKS----EVILEGEVVAINAETGDYLPFQELMHRRRKYGVEEAMENYPVVMNFFD 341
Query: 554 ILYRNGQPLLQEQLRVRREHL---YDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
+LY +G+ + RR+ L D+ +++ T+ + +EI +F+ AA++
Sbjct: 342 VLYVDGKSKTELTYMERRKLLKKIIDAVKDDNKVRLIEQTIAT-KPEEIDRFMAAAIEDG 400
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
CEG++IK + +TY R W+KLK++Y + D+LDLV + A HGRG+RTG YGA
Sbjct: 401 CEGVMIKQLS--STYRAGAREYAWVKLKREYRSDLADTLDLVVVGALHGRGRRTGKYGAL 458
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
LLA YD + FQS+ K+GTGF++ LE+ + L +I + + R + DVWFEP
Sbjct: 459 LLAAYDQKTDMFQSVTKVGTGFTDVHLEQFYNELEKHIINQ--RHARVQTGMDMDVWFEP 516
Query: 731 TERPETSNSPASIVYDSQITCLPS 754
E V S+IT PS
Sbjct: 517 NMVIE--------VIASEITLSPS 532
>gi|4099066|gb|AAD00532.1| DNA ligase [Pyrobaculum aerophilum str. IM2]
Length = 589
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 188/575 (32%), Positives = 295/575 (51%), Gaps = 46/575 (8%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I T R + ++ ++ + + +PE++ +VY + P EG+ELG+ + ++A+
Sbjct: 18 IEATTQRTTMVKLLVSLFK---KASPEEVGKIVYFILGDLRPPWEGVELGVAEKLCLRAV 74
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD--------PLTITKVFDTFRL 314
++A G S ++ Y++ GD+G +A+R + + ++P PL +++V+DT
Sbjct: 75 SKATGAAVSELEALYKKTGDVG---EAARRALAASKRPGLLAFGSQKPLEVSEVYDTLLK 131
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+A+ G+ +Q+ K + +L AT E +Y+ R + KLR+G+A+ T++ AL A N
Sbjct: 132 VARATGEGAQDMKVALLSSLFARATPEEGKYIARFVVGKLRLGVADMTIIEALSDAYGVN 191
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
++ + +I L ++ K V P+ E TPG+P+ P
Sbjct: 192 KEALEKAYHIYPDL---GRLAKHVAEGKPLDE-----------------IRITPGVPVLP 231
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLA+ SEI+ K CEYKYDGERAQIH L G V+I+SR E T +PDVV
Sbjct: 232 MLAQRLSSASEILAKLGGSAI-CEYKYDGERAQIH-LTPGGVKIFSRRLEDITHAYPDVV 289
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV-DVCIYAFD 553
AV + S + +L+ EIVA D + +LPFQ L R RK+ + +++ +Y FD
Sbjct: 290 KAVK--EAVSAKEAILEGEIVAVDPDTGDMLPFQELMHRKRKHDVATAVELYPTVLYLFD 347
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEG 613
+LY +G+ L +E L RR L + E A + + + F +V EG
Sbjct: 348 VLYVDGEDLTEEPLIYRRVRLSEIVCETDKV-SIAKWRIFDNAEAVDVFFHESVSMGTEG 406
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
LI K+ + YE R NW+K K+DY + D++DLV + AFHGRGKR G+YGAFLLA
Sbjct: 407 LICKS--PSSIYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLA 464
Query: 674 CYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTER 733
YD + + F ++CK+G+GF++A L++ L+ IP P R + DVWF P
Sbjct: 465 AYDPSTDMFYTVCKVGSGFTDADLKKMYEILQPFKIPHRHP--RVVSKMEADVWFVPQVV 522
Query: 734 PETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
E A I TC + P RF R
Sbjct: 523 IEVIG--AEITLSPLHTCCLGAVRPGVGLAVRFPR 555
>gi|18312215|ref|NP_558882.1| ATP-dependent DNA ligase [Pyrobaculum aerophilum str. IM2]
gi|14423669|sp|O93723.2|DNLI_PYRAE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|18159655|gb|AAL63064.1| DNA ligase [Pyrobaculum aerophilum str. IM2]
Length = 584
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 188/575 (32%), Positives = 295/575 (51%), Gaps = 46/575 (8%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I T R + ++ ++ + + +PE++ +VY + P EG+ELG+ + ++A+
Sbjct: 13 IEATTQRTTMVKLLVSLFK---KASPEEVGKIVYFILGDLRPPWEGVELGVAEKLCLRAV 69
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD--------PLTITKVFDTFRL 314
++A G S ++ Y++ GD+G +A+R + + ++P PL +++V+DT
Sbjct: 70 SKATGAAVSELEALYKKTGDVG---EAARRALAASKRPGLLAFGSQKPLEVSEVYDTLLK 126
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+A+ G+ +Q+ K + +L AT E +Y+ R + KLR+G+A+ T++ AL A N
Sbjct: 127 VARATGEGAQDMKVALLSSLFARATPEEGKYIARFVVGKLRLGVADMTIIEALSDAYGVN 186
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
++ + +I L ++ K V P+ E TPG+P+ P
Sbjct: 187 KEALEKAYHIYPDL---GRLAKHVAEGKPLDE-----------------IRITPGVPVLP 226
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLA+ SEI+ K CEYKYDGERAQIH L G V+I+SR E T +PDVV
Sbjct: 227 MLAQRLSSASEILAKLGGSAI-CEYKYDGERAQIH-LTPGGVKIFSRRLEDITHAYPDVV 284
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV-DVCIYAFD 553
AV + S + +L+ EIVA D + +LPFQ L R RK+ + +++ +Y FD
Sbjct: 285 KAVK--EAVSAKEAILEGEIVAVDPDTGDMLPFQELMHRKRKHDVATAVELYPTVLYLFD 342
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEG 613
+LY +G+ L +E L RR L + E A + + + F +V EG
Sbjct: 343 VLYVDGEDLTEEPLIYRRVRLSEIVCETDKV-SIAKWRIFDNAEAVDVFFHESVSMGTEG 401
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
LI K+ + YE R NW+K K+DY + D++DLV + AFHGRGKR G+YGAFLLA
Sbjct: 402 LICKS--PSSIYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLA 459
Query: 674 CYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTER 733
YD + + F ++CK+G+GF++A L++ L+ IP P R + DVWF P
Sbjct: 460 AYDPSTDMFYTVCKVGSGFTDADLKKMYEILQPFKIPHRHP--RVVSKMEADVWFVPQVV 517
Query: 734 PETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
E A I TC + P RF R
Sbjct: 518 IEVIG--AEITLSPLHTCCLGAVRPGVGLAVRFPR 550
>gi|169806130|ref|XP_001827810.1| ATP-dependent DNA ligase [Enterocytozoon bieneusi H348]
gi|161779258|gb|EDQ31281.1| ATP-dependent DNA ligase [Enterocytozoon bieneusi H348]
Length = 628
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 189/577 (32%), Positives = 295/577 (51%), Gaps = 84/577 (14%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F+ + + I N R+ I +I+ N ++ T L +++++ + P+ LE+
Sbjct: 8 FVQFANILQEIENTNKRLKIQEILSNYYSHIINTDIGLLHMILHMSTATVYPSFVNLEMN 67
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM----MRKPDPLTITKV 308
IG+ ++ +AE G +K ++++GD G + K + ++ LTI V
Sbjct: 68 IGEGALQPIIAECTGMDIKKIKLLFKDIGDYGEIIKTYKIQKTFNFLSAANITQLTIHDV 127
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
++ + G S +K+ I ++ A+ E +Y+IRLL+ KL+IGLA QT+L +L
Sbjct: 128 YNLCTKLCVITGTKSNVEKRKIILEVIRDASPLESKYIIRLLEGKLKIGLALQTILISLS 187
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT-----DGVWNLSNT 423
A Y++ + I+K+ ++ P ++ +V ++ + NL
Sbjct: 188 MALGYSDYN----------------IIKEAYNKRPDFKYLVEKIIVAKSIGKTLKNL--I 229
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH-YL----------- 471
PGIP+ PMLA P + ++KF ++ EYKYDGERAQIH YL
Sbjct: 230 IKIEPGIPLKPMLATPITNLDSAISKFNNV--LAEYKYDGERAQIHSYLFKRQLSFKNLT 287
Query: 472 --------------EDGSV---------------EIYSRNAERNTGKFPDVVLAVSRLKK 502
DG V +I+SRN E + K+ D+V + K
Sbjct: 288 GSTTTIERFFEQKTNDGIVNVNQNTSVTGKVCYNKIFSRNNEDISEKYNDLVQI--KFNK 345
Query: 503 PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPL 562
+ +S++LD EIVAY E I+PFQTLSTR RK I+V VC +AFD++Y +G+ L
Sbjct: 346 NN-KSYILDGEIVAY--ENGNIMPFQTLSTRKRK--YNEKIEVPVCYFAFDLIYFDGKEL 400
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRD 622
+ L RR+ L+ +F P F+FA + ++ +F +AA CEGL+IK D
Sbjct: 401 IDMPLEDRRKLLHANFTTIPNVFEFAIGKIIDNNKDMNEFFEAASTNRCEGLMIK--DLG 458
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
A Y+PS RS WLKLKKDY++++GDS DLV I A+ G+GKRTG+YG FLL Y+ F
Sbjct: 459 ALYQPSHRSNQWLKLKKDYLDNLGDSFDLVVIGAYFGKGKRTGMYGGFLLGVYNDETNTF 518
Query: 683 QSICKIGTGFSEAMLEERSSSL-----RSKVIPKPRP 714
++ CKIGTGFS+ L + L + ++ K RP
Sbjct: 519 EACCKIGTGFSDDYLMKIYKELEPIQQHTNILVKDRP 555
>gi|154274049|ref|XP_001537876.1| hypothetical protein HCAG_07298 [Ajellomyces capsulatus NAm1]
gi|150415484|gb|EDN10837.1| hypothetical protein HCAG_07298 [Ajellomyces capsulatus NAm1]
Length = 790
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 132/245 (53%), Positives = 172/245 (70%), Gaps = 3/245 (1%)
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVC 548
K+PD++ + K SFVLDCE VA+D +K+LPFQ L TR RK+V D+KV VC
Sbjct: 460 KYPDILGKLENWVKQGTTSFVLDCETVAWDTVNKKVLPFQQLMTRKRKDVKAEDVKVKVC 519
Query: 549 IYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVD 608
++AFD+L+ NG+P ++ LR RR L+D+F G F FA + DLDEIQ LD +V
Sbjct: 520 VFAFDLLFLNGEPTVKMTLRERRARLHDAFTPIEGEFVFAQHGDTNDLDEIQTLLDESVK 579
Query: 609 ASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
ASCEGL++K +D ++ YEPSKRS NWLK+KKDY+ IGDSLDLV + A++GRGKRT VY
Sbjct: 580 ASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYYGRGKRTSVY 639
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPD 725
GAFLLA Y+++ + FQ++C IGTGFSEA+LEE SL VI P+P+Y + PD
Sbjct: 640 GAFLLAAYNTSTQTFQTVCNIGTGFSEALLEELHKSLSPLVIDCPKPFYDHSSVPKDQPD 699
Query: 726 VWFEP 730
VWFEP
Sbjct: 700 VWFEP 704
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 165/334 (49%), Gaps = 29/334 (8%)
Query: 70 KKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDN 129
K++ SP +S S P +R + + T G+K A + N + + +
Sbjct: 119 KREKSPMEDSDESDVQPVTKRRKRAPSNRET---AGKKPS--ASQNQNKRTRSPNKAREK 173
Query: 130 PIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGE 189
P+ +KES + + K KIA+ K V K DP W+ GE
Sbjct: 174 PVAEDKESSSAEQEDIISDNDDDLAEEKPKIAQKKRETVQQALKGSREDP--YPDWKAGE 231
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
VP+ L F +I T R++I LR V+ TP+DL+P V L NK+A + G+
Sbjct: 232 PVPYAALCTTFSLIEMTTKRLIILSHCSLFLRQVLRLTPKDLLPTVQLMLNKLAADYAGV 291
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELGIG++ I+KA+ E+ GR+ + +K E+GDLGLVA SRS+Q M KP PLT+ V
Sbjct: 292 ELGIGESFIMKAIGESTGRSLAVIKADQHEIGDLGLVAAKSRSNQPTMFKPKPLTVRGVH 351
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDC-------------------EPQYLIRLL 350
+ IAK G SQEKK + IK LL +A E +++IR L
Sbjct: 352 EGLLAIAKTQGHGSQEKKISAIKKLLSSADATLAGKGSKGIDITQNKGGPSEAKFIIRFL 411
Query: 351 QSKLRIGLAEQTLLAALGQAAVYNE---QHSKPP 381
+ KLR+GLAE+T+L AL A V +E Q K P
Sbjct: 412 EGKLRLGLAEKTVLVALAHAMVAHEVELQGKKAP 445
>gi|16082164|ref|NP_394605.1| ATP-dependent DNA ligase [Thermoplasma acidophilum DSM 1728]
gi|14423677|sp|Q9HJ26.1|DNLI_THEAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|10640459|emb|CAC12273.1| DNA ligase related protein [Thermoplasma acidophilum]
Length = 588
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 292/548 (53%), Gaps = 44/548 (8%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F ++ F+ + + T R+ +TD++ N+L+ +DL ++YL K+ P + G+E
Sbjct: 3 FSVVADAFEKMESTTKRLELTDLLVNLLKEA----DDDLPLLIYLLEGKLGPDYLGIETQ 58
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA---SRSSQSMMRKPDPLTITKVF 309
+ D IIKAL+ A +E + K+Y + GD+G +AK RS +S+++ + +T+ +
Sbjct: 59 MSDKLIIKALSVASNISEDEIAKEYAKAGDIGTIAKEIAEKRSLRSLVQ--EEMTVKYIH 116
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
DT +A+ G S + + + L + +T E Y+ R++ KLRIG+++ T+L A+ +
Sbjct: 117 DTLMKMARTTGSGSTKARVDAYMDLFLNSTPKEIMYITRIITGKLRIGISDATILDAIVK 176
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL---TDGVWNLSNTCSF 426
A +E++S+ ++ F+ P I L D + L T
Sbjct: 177 AFA-DEKYSED--------------IENAFNFHPDLGYIASELRKGNIDAILKLGPT--- 218
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC--EYKYDGERAQIHYLEDGSVEIYSRNAE 484
P IP MLA+ + V EI+ K M C EYKYDG R + H +E G V ++SR E
Sbjct: 219 -PMIPFKVMLAERLRSVEEILEK---MGGRCAFEYKYDGMRTETH-IERGKVRLFSRGNE 273
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI- 543
T +FPD+ A S K V S +LD E V YD + ++ PFQ +S R + L +
Sbjct: 274 ETTNQFPDITKAASETFK--VDSAILDGEAVPYDPDTGELYPFQVISHRRGRKYDLDKVS 331
Query: 544 -KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
++ + ++ FDI+Y NG+ L + RR+ L F E F + A + S D E+ +F
Sbjct: 332 SEIPITVFLFDIVYLNGRDLSKTPYTERRKILESIFTESDSF-RLAKRIESGDPAEVHRF 390
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
++A++ CEGL+ K+ D+ Y+ R W+KLK+DY + D+LDL + AF+G G+
Sbjct: 391 FNSAIEDGCEGLVAKSTSPDSFYKAGARGWLWIKLKRDYQAQLWDTLDLTVVGAFYGHGR 450
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G YGA LLA Y+ N+ F+++CK+G+GFS+ +L + + K +P R +
Sbjct: 451 RKGTYGALLLATYNDKNDTFETVCKLGSGFSDDVLFSLPKKF-EQYVSKEKP-ARVISNL 508
Query: 723 SPDVWFEP 730
PDVWF P
Sbjct: 509 EPDVWFYP 516
>gi|325967622|ref|YP_004243814.1| ATP-dependent DNA ligase I [Vulcanisaeta moutnovskia 768-28]
gi|323706825|gb|ADY00312.1| DNA ligase I, ATP-dependent Dnl1 [Vulcanisaeta moutnovskia 768-28]
Length = 606
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 181/557 (32%), Positives = 282/557 (50%), Gaps = 42/557 (7%)
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV-PVVYLAANKIAPAH 246
G + FI + V + I T R ++ +L ++++ TP D++ V+Y ++ P
Sbjct: 4 GNDIKFIDVVRVLESIEATTQRT----VMAKLLSSLLKKTPPDVIDKVIYFILGQLRPDW 59
Query: 247 EGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ-------SMMR- 298
EG+ELG+ + +A+A A G + V+ Y+++GD+G AK SS+ S++
Sbjct: 60 EGVELGVAEKFTFRAIANATGASVKQVEDLYKKIGDIGETAKRIMSSKPQQGGGKSILEF 119
Query: 299 ----KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
+ LT+ KV+DT IAK +G+ +Q+ K + L A E +Y+ R + +L
Sbjct: 120 FGGGGIEELTMGKVYDTLMSIAKASGEGAQDTKVKLLIYLFSRAKPEEAKYIARFVIGRL 179
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
R+G+A+ T+L AL A + + +I L AK+V Q
Sbjct: 180 RLGVADMTILDALSDAYKVSRDALERAYHIYPDLGYIAKMVAQEGQ-------------- 225
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
N + TPG+PI PMLA+ +EI+ K EYKYDGERAQ+H DG
Sbjct: 226 ----NALSKIHVTPGVPIQPMLAERLSTAAEILAKLGGTAM-VEYKYDGERAQVHRTRDG 280
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
V I+SR E T +PDV V + + ++++ EI+A D + + PFQ L R
Sbjct: 281 EVRIFSRRLENITYAYPDVAEYVK--EAIDAKEYIVEGEIIAIDPDTGEFRPFQELMHRK 338
Query: 535 RK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
RK +V + + V I+ FD++Y +GQ L L R+ L + + + AT
Sbjct: 339 RKHDVKEAMKEYPVNIFLFDVMYVDGQDLTNLPLIDRKRRLLEILKPSE-YVHLATWRVI 397
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
D +E+ KF A+ CEG++ K++ D+ YE R W+K K+DY + D+LDLV
Sbjct: 398 NDAEELDKFFHEAISDGCEGVMCKSIKADSIYEMGARGWLWIKYKRDYRSELTDTLDLVV 457
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR 713
+ AF GRGKR G YGA L+A YD ++F ++ K+G+GF++ L + L IP
Sbjct: 458 VGAFWGRGKRAGTYGALLIAAYDPKTDQFYTVSKVGSGFTDEDLVKLKQMLDPYRIPHRH 517
Query: 714 PYYRFADTISPDVWFEP 730
P R + PDVWF P
Sbjct: 518 P--RVVSKMEPDVWFVP 532
>gi|358053749|dbj|GAB00057.1| hypothetical protein E5Q_06759 [Mixia osmundae IAM 14324]
Length = 1053
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 191/683 (27%), Positives = 315/683 (46%), Gaps = 142/683 (20%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
VP+ FL+ F +I+ R++I ++ N LRT+ P+ L+ VYL N +AP++EG+E
Sbjct: 297 VPYAFLTAAFVLIAATRSRLVIVTLLTNALRTITHFQPDALLHAVYLTTNHVAPSYEGIE 356
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
LGI + KA+ +KK + + GD+G VA ++ + PLTI+ V+
Sbjct: 357 LGIAGTVVTKAIKTVSNAGPGELKKLWTKHGDMGDVAFECKARIRTIVPTAPLTISGVYK 416
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
+ +A G + K + ++ +LV+A E ++L+R S LRI T+ A+L +A
Sbjct: 417 SLVKLAGLRGPGMTQTKSDIVQKMLVSARGEEVRFLVRTFVSHLRINAVRLTVTASLARA 476
Query: 371 -AVYNEQHSKP---------------------------PPNIQSPLEEAAKIVKQ----- 397
+ + +HS+ P + + L AK VK+
Sbjct: 477 FCLTDSRHSEEEEFAALAATARHKRAASFESSSSLFWIPVDRRQGLRATAKTVKEGKDLP 536
Query: 398 ------------------VFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKP 439
V+ P Y IVPALL G+ L+ G P+ PML +
Sbjct: 537 ARLALMQTLAAAERTVKTVYVRHPNYNHIVPALLETGLSGLAEAVPIAIGTPLNPMLGQI 596
Query: 440 TKGVSEIVNKFQ-DMEFTCEYKYDGERAQIH-----------------------YLEDGS 475
T+ + ++ + + F E+KYDG+R QIH ++ D +
Sbjct: 597 TRDLGDVAQRLAPNRPFVAEWKYDGQRVQIHARTREPGEKVNADPITVKGKGGKWVGDDN 656
Query: 476 ---VEIYSRNAERNTGKFPDVVLAVSRLKKPS-----------VRSFVLDCEIVAYDREK 521
V ++SR+ E T K+PD++ V + + V SFV+D E+VA D
Sbjct: 657 SVYVRLFSRHLEDMTEKYPDILALVPTMLNATAARKSAGEPEHVDSFVMDAEVVAIDVAS 716
Query: 522 QKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF--- 578
+ FQ L+ RA+K+V L ++KV V ++AFD++ NG LL++ R RR+ +
Sbjct: 717 GALQTFQALAGRAKKDVQLGEVKVRVGVFAFDLMQLNGVSLLEQPFRRRRDLIKKLLPPR 776
Query: 579 ---EEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMDRD----------- 622
+ + F +L ++ DL+ I +F+ A+ CEGL+IK +D +
Sbjct: 777 TPDDLKLARFDHVKSLEGSTADLEPIAEFMAEAISNRCEGLMIKVLDNEPVDSLAIQTEP 836
Query: 623 -------------------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
+TYEP KR+ +WLK+K+DY ++GDSLDL
Sbjct: 837 AHSDDDGISDSDEESKAHLSPQKPGRKKALLSTYEPDKRADSWLKVKRDY-GALGDSLDL 895
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR--SKVI 709
VPI A+HG+G++ G + LLA Y+ E FQ++CK +GF++ + + + S
Sbjct: 896 VPIGAWHGQGRKVGWWSPILLALYNPETEGFQAVCKCISGFTDEFYKSLNERYKRDSDNC 955
Query: 710 PKPRPYYRFADTISPDVWFEPTE 732
+ R + PD W+EP+E
Sbjct: 956 SRTRLATIEPGGLHPDYWWEPSE 978
>gi|407465083|ref|YP_006775965.1| ATP-dependent DNA ligase I [Candidatus Nitrosopumilus sp. AR2]
gi|407048271|gb|AFS83023.1| ATP-dependent DNA ligase I [Candidatus Nitrosopumilus sp. AR2]
Length = 588
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 277/521 (53%), Gaps = 33/521 (6%)
Query: 216 VCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVK 274
+ L + E TP D++ +VYL K+ P EG+ELG+ + I+A++++ G ++
Sbjct: 22 LTQHLVELFEKTPHDVISKIVYLIQGKLRPDFEGIELGVAEKLAIRAISKSSGIPIKKIE 81
Query: 275 KQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
+Y++ GDLG + + +Q+ D +T+ +V+DT IAK G SQ+ K I
Sbjct: 82 DEYRKGGDLGHASTVILEQKTQTTFLVED-ITVERVYDTLFKIAKLGGTRSQDMKMKYIS 140
Query: 333 ALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAA 392
+LL AT E Y++++L LR+G+AE T++ AL A N+++ K
Sbjct: 141 SLLNDATPLEASYILKILLGTLRLGIAENTVMDALAIAFSGNKENRKK------------ 188
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWNLSN--TCSFTPGIPIGPMLAKPTKGVSEIVNKF 450
++ ++V K+ + T G+ + F P I PMLA K E + K
Sbjct: 189 --LQYAYNVSSDLGKVAETIATKGLEGIEEFEIILFNP---IRPMLADRVKSEEEAIEKM 243
Query: 451 QDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
+ EF EYK DGER Q+H +E VE++SR+ ER +PD++ + K + +L
Sbjct: 244 GN-EFAAEYKLDGERVQLH-IEGDKVELFSRSLERIESYYPDIIEKIP--KNIQADNIIL 299
Query: 511 DCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
+ E VA + + LPFQ L R RK + + + + + FDILY NG+ + +
Sbjct: 300 EAEAVAINENTGEFLPFQELMHRRRKYKIEKAVTEYPITVNFFDILYCNGKSCIDLSYKE 359
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSK 629
RRE L +E+ F ++ + EI+ F++ +++A EGL++K +D+ Y+
Sbjct: 360 RREKLEKHVKEDE-FAKYIPMKIVKNQSEIEDFMENSINAGSEGLMLKMLDK--PYQAGS 416
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
R +WLKLK++Y +GDSLDLV I F G+G+RTG YG LLA YD + + F SICK+G
Sbjct: 417 RGSHWLKLKREYRNELGDSLDLVVIGGFFGKGRRTGNYGTLLLATYDEDEDTFPSICKVG 476
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
TGFS+ L++ L KV K P R + DVWFEP
Sbjct: 477 TGFSDESLDQLYQILHPKVSIKKNP--RIISDMEADVWFEP 515
>gi|332796299|ref|YP_004457799.1| ATP-dependent DNA ligase I [Acidianus hospitalis W1]
gi|332694034|gb|AEE93501.1| DNA ligase I, ATP-dependent Dnl1 [Acidianus hospitalis W1]
Length = 600
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 177/577 (30%), Positives = 307/577 (53%), Gaps = 42/577 (7%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++ + +T + VVYL K+ P G+ EL
Sbjct: 3 FKIIAEYFDRLEKISSRLQLTSLLADLFK---KTDKNVIDKVVYLIQGKLWPDFLGMPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA---KASRSSQSMM------RKPDP 302
GIG+ +I+AL+ A ++ ++K Y+ +GDLG VA K + S S++ + P
Sbjct: 60 GIGEKFLIRALSIATSVSDDEIEKMYKSVGDLGQVAFDIKQKQQSASILAFLGAQKASKP 119
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LT+ KV+D +A G+ S++ K + LL A+ E +YL+R + +LR+G+ + T
Sbjct: 120 LTVEKVYDDLTKVATSTGEGSRDIKIRLLAGLLKDASPLEAKYLVRFVDGRLRVGIGDAT 179
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL Q+ +P IV++ +++ I L G+ L N
Sbjct: 180 ILDALA-ITFGGGQNFRP-------------IVERAYNLRADLGNIAKILANGGIEQLKN 225
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
PGIPI PMLA+ +E+++K ++ +YKYDGER QIH D + I+SR
Sbjct: 226 IKP-QPGIPIRPMLAERLSDPAEMLSKVGNLAL-VDYKYDGERGQIHKAGD-KIFIFSRR 282
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
E T ++PDV +S+ K + F+++ EI+ D E ++ PFQ L R RK+
Sbjct: 283 LENITNQYPDVAEYISKYVKGN--EFIVEGEIIPVDPETGEMRPFQELMHRKRKSDIHEA 340
Query: 543 IK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
IK V ++ FD++Y G+ + L RR+ L +S E+ + AT + + +++++++
Sbjct: 341 IKEYPVNVFLFDLMYYEGEDYTVKPLSERRKKL-ESIVEDNDYVHIATHIITDNVEKLKE 399
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
F A+ EG+++K++ DA Y+ R W+K K+DY + D++DLV + AFHG+G
Sbjct: 400 FFYQAISEGAEGVMVKSLAPDAIYQAGSRGWLWIKFKRDYQSEMADTVDLVMVGAFHGKG 459
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV--IPKPRPYYRFA 719
++ G Y +FL+A Y+ + + F+++CK+ +GF++A L++ L+ K+ + + P+ R
Sbjct: 460 RKGGKYSSFLMAAYNPDKDVFETVCKVASGFTDAELDD----LQKKIAELKRDSPHPRVV 515
Query: 720 DTISPDVWFEPTERPETSNSPASIVYDSQITCLPSSY 756
T+ PDVW P E A I TC Y
Sbjct: 516 STMVPDVWLTPALVAEIIG--AEITISPLHTCCKDQY 550
>gi|119719660|ref|YP_920155.1| ATP-dependent DNA ligase [Thermofilum pendens Hrk 5]
gi|224487899|sp|A1RY72.1|DNLI2_THEPD RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|119524780|gb|ABL78152.1| DNA ligase I, ATP-dependent Dnl1 [Thermofilum pendens Hrk 5]
Length = 601
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 292/549 (53%), Gaps = 34/549 (6%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ L+ ++ I + + R+ +TD + + + +T PE + VVYL ++ P +EG+E
Sbjct: 7 LPYSVLADFYERIESTSSRLAMTDYLVALFK---KTPPEVIDKVVYLTQGQLRPDYEGVE 63
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS--QSMMR------KPDP 302
LG+ + ++ALA+A GR V+ Y++ GD+G VA+ ++ ++ +
Sbjct: 64 LGVAEKLALRALAKASGRHLKDVEDLYKKTGDIGAVAEKLLTAPGGGLLEFFGTPVQKKE 123
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LT+++V+ IA+ +G+ +QE K N + ALL A E +Y++R + +LR+G+A+ T
Sbjct: 124 LTVSQVYSALMKIAQASGEGAQETKVNTLVALLQDAKPKEARYILRTVLGRLRLGIADMT 183
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL A ++ ++++ ++ P I L T G+ +
Sbjct: 184 ILDALAAAFAGSKAARD--------------VIERAYTKHPDLGYIAKLLATKGL-DAVA 228
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
+ GIP+ PMLA+ +EI+ K + EYKYDGER Q H D V ++SR
Sbjct: 229 SLKIEVGIPVLPMLAERLSDPAEILEKLGG-KCLAEYKYDGERVQAHKSGD-KVLLFSRR 286
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLS 541
E T +PDVV V RLK VR +++ EIVAY+ + ++LPFQ L R RK +V +
Sbjct: 287 LENITHHYPDVVEYVKRLK---VREAIVEGEIVAYNPDTGEMLPFQELMHRRRKYDVEKA 343
Query: 542 DIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
+ V +Y FD++Y +G+ L+++ L RR L E +T D ++
Sbjct: 344 MKEYPVRVYLFDVIYMDGEELIEKPLDQRRLILEKIVPEGDEDILLSTAKVVGDAKDLLH 403
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
F + A+ CEG++ K++ + Y+ R W+K K+DY + D++DLV + FHGRG
Sbjct: 404 FFEQAISEGCEGVMCKSIGPGSIYQMGARGWLWIKFKRDYRMEMTDTVDLVVVGGFHGRG 463
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT 721
KR G YGA L+A YD + F+++CK+GTGF++ L + L IP P R
Sbjct: 464 KRAGTYGALLMAAYDPETDTFKTVCKVGTGFTDEDLAKLPELLDPYKIPHRHP--RVFSK 521
Query: 722 ISPDVWFEP 730
I DVWF P
Sbjct: 522 IEADVWFVP 530
>gi|353238069|emb|CCA70026.1| related to DNA ligase (ATP) [Piriformospora indica DSM 11827]
Length = 1020
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 199/706 (28%), Positives = 325/706 (46%), Gaps = 154/706 (21%)
Query: 183 AC--WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAAN 240
AC W +G P+ L ++ RI I I+ N+LR ++ E ++P +YL +N
Sbjct: 238 ACSYWTRGTPAPYSLLVHALVSLAATKSRIAILSILTNLLRILIVYDSESVLPALYLLSN 297
Query: 241 KIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP 300
+ A EG+ELG+G + I K L T + ++ Y++ GD G VA + +S
Sbjct: 298 SLGAAWEGIELGVGGSIISKILQTTTSITSTTIRNLYKKYGDPGDVAYYAVVGESS---- 353
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC------------------- 341
++ R IA G+ SQ+ ++ + LL++A
Sbjct: 354 -----GALYKDLRKIASSRGEKSQKIRQAITERLLLSAVGSSWKSGKPSGQDSIIDLNPH 408
Query: 342 ----EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY-NEQHSKPPPN-------IQSPLE 389
E +YL+R L LR+G T+L+AL +A V+ Q + P + S +
Sbjct: 409 LLGEEARYLVRTLIQNLRVGAVRTTILSALARAIVFTTSQQRRADPTALLRYSILASDCD 468
Query: 390 EAAKIVKQV------------------------------------------------FSV 401
K++ QV ++
Sbjct: 469 TVRKVLLQVRKQDETGTSGTSKKSKQISKAAQTPEYLAAQERVQNVLKRAEACLRKTYAQ 528
Query: 402 LPVYEKIVPALL---TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ-DMEFTC 457
P Y+ IVP LL DG+ +++ + G+P+ L P + + ++ + + +T
Sbjct: 529 HPRYDDIVPVLLREGIDGIAGENSSVGLSLGVPVMHTLGSPMRSLDDVYERLGPNASWTA 588
Query: 458 EYKYDGERAQIH-YLEDGS--VEIYSRNAERNTGKFPDVVLAVSRL--KKPSVRSFVLDC 512
E KYDG+RAQ+H + ++G V+I+SR+ E T K+PD+V +SR P + SF++D
Sbjct: 589 EMKYDGQRAQVHAWRKNGQIKVKIFSRHLEDMTDKYPDIVYLISRRFDTDPFLDSFIVDS 648
Query: 513 EIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRRE 572
E VA DR ++ FQ L+ RAR++V +S++KV VC+Y FD++Y NG PL+Q+ R RR
Sbjct: 649 EAVAVDRFTGELRSFQELAGRARRDVKISEVKVAVCLYLFDMMYLNGTPLIQKPFRERRR 708
Query: 573 ----HLYDSFEEEPGFFQFATT---------LTSIDLDE----IQKFLDAAVDASCEGLI 615
HL S G T+ + S++ DE +++F + A+++ CEGL+
Sbjct: 709 LLRTHLPPSEPVVAGHNDAPTSSHILARLDHVESVEADEGREVVEEFWEKAIESKCEGLM 768
Query: 616 IKTMDRD------------------------------------ATYEPSKRSLNWLKLKK 639
IK +D ATYEP KR+ WLKLKK
Sbjct: 769 IKLLDDTQVTLGDGEEDIEDDEDLETPKRAKKNGSSTRRKALPATYEPDKRTSAWLKLKK 828
Query: 640 DYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
DY+E IGDSLDLVP+ A+HG G++ + LLA YD ++ ++CK +GF++A +E
Sbjct: 829 DYVEGIGDSLDLVPVGAWHGNGRKAAWWSPILLAVYDPAGDQLVALCKCMSGFTDAFYKE 888
Query: 700 RSSSL--RSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ ++ K + P+V+F+P+E E + +I
Sbjct: 889 LNEKYPEGTETCSKTSLWNVETGGYKPNVYFKPSEVWEIRGADLTI 934
>gi|126466208|ref|YP_001041317.1| ATP-dependent DNA ligase [Staphylothermus marinus F1]
gi|91177882|gb|ABE27150.1| ATP-dependent DNA ligase [Staphylothermus marinus]
gi|126015031|gb|ABN70409.1| DNA ligase I, ATP-dependent Dnl1 [Staphylothermus marinus F1]
Length = 611
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 190/556 (34%), Positives = 303/556 (54%), Gaps = 41/556 (7%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+PF L+ F+ I T R +T ++ N+ + +T PE + VVYL ++ P +GL
Sbjct: 15 MPFRELADTFERIEIITSRTQMTVLLVNLFK---KTPPEIIDKVVYLLQGRLWPDWKGLP 71
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA------------KASRSSQSMM 297
ELG+G+ +IKA+A A TES V+ Y+ +GDLG A K + S + +
Sbjct: 72 ELGVGEKMLIKAIALATQSTESEVESLYKSLGDLGKAAEKLKAIYEEKLKKGAMSILAFV 131
Query: 298 RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIG 357
LT+++V++T +A G+ S++ K + LL A+ E +Y+IR ++ +LR+G
Sbjct: 132 PVKRELTVSQVYETLSRVALATGEGSRDIKLKLLAGLLSDASPKEAKYIIRFVEGRLRLG 191
Query: 358 LAEQTLLAALGQAAVYNE-QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
+ + T++ AL A VY H++P IV++ +++ I L T G
Sbjct: 192 IGDATIMDAL--AIVYGGGAHARP-------------IVERAYNLRADLGHIAKILATQG 236
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ N GIPI PMLA+ EI+ K + F EYKYDGERAQIH L D +
Sbjct: 237 L-NALKGIKPQVGIPIRPMLAERLNNPVEILKKVGGIAF-VEYKYDGERAQIHKLGD-KI 293
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
IYSR E T ++PDVV + K + +++ EIVAYD + ++ PFQ L R RK
Sbjct: 294 WIYSRRLENITHQYPDVVDYARKYIKAN--EAIVEGEIVAYDPDTGELRPFQELMHRKRK 351
Query: 537 -NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
++ ++ +V V +Y FD+LY +G+ + L RR L + E+ F Q A + + +
Sbjct: 352 HDIHIAIKEVPVKVYLFDLLYVDGEDYTLKPLPERRAKLVEIIEQTETF-QIAEYIRTNN 410
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
DE++KF A++ EG++IK + ++A Y+ R W+K K+DY + D++DLV I
Sbjct: 411 PDELEKFFLKAIEDGAEGVMIKALHKNAIYQAGTRGWLWIKYKRDYKSEMIDTVDLVVIG 470
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
AF+GRG+R G YGA L+A Y+ + + F+S+CK+G+GF + +++ L+ +I P
Sbjct: 471 AFYGRGRRGGKYGALLMASYNPDKDVFESVCKVGSGFKDEDIDKLPEMLKPYIIEHKHP- 529
Query: 716 YRFADTISPDVWFEPT 731
R + PDVW P
Sbjct: 530 -RVVARMKPDVWVTPA 544
>gi|305662687|ref|YP_003858975.1| ATP-dependent DNA ligase I [Ignisphaera aggregans DSM 17230]
gi|304377256|gb|ADM27095.1| DNA ligase I, ATP-dependent Dnl1 [Ignisphaera aggregans DSM 17230]
Length = 604
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 287/541 (53%), Gaps = 43/541 (7%)
Query: 220 LRTVMETTPEDLV-PVVYLAANKIAPAHEGL-ELGIGDASIIKALAEACGRTESHVKKQY 277
L + + TP +++ VVY+ + P +GL ELGI + + KA++ A G +E+ V++ Y
Sbjct: 26 LALLFKKTPSNVIDKVVYIIQGTLWPDWKGLPELGIAEKGVQKAISMALGVSEAEVERVY 85
Query: 278 QEMGDLGLVA---KASRSSQSMM----------RKPDPLTITKVFDTFRLIAKEAGKDSQ 324
+ +GD GL K + ++S+ LT+ +V+ IA G+ S+
Sbjct: 86 KSLGDYGLAVERLKLGKQNKSVGLVGFIKSAKGEVYKKLTVDEVYSQLVKIAMLQGEGSR 145
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI 384
+ K + +LL A E +Y++R ++ +LR+G+ E T++ L A
Sbjct: 146 DMKLRLLSSLLAVADPKEAKYIVRFIEGRLRLGVGEATIMDGLASA-------------F 192
Query: 385 QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVS 444
+P + ++++ +++ P I L GV L N TPGIP+ PMLA+ +
Sbjct: 193 GAPRD----LIERAYNIYPDLGAIAKLLAEKGVVELKNIKP-TPGIPLRPMLAERASDPT 247
Query: 445 EIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV-LAVSRLKKP 503
EI+NK + E+KYDGERAQIH D + I+SR E T ++PDVV +A+ R+K
Sbjct: 248 EILNK-AGIPALAEFKYDGERAQIHKKGD-RIWIFSRRLEEITNQYPDVVEMALKRIKAE 305
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPL 562
+++ EI+A D E + PFQ L R RK ++ + + V + FD LY +G +
Sbjct: 306 EA---IVEGEIIAIDPETGEFRPFQELMHRKRKKDIHEALKEYPVVVRLFDCLYVDGIDM 362
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRD 622
+ L RRE L +E F + A + + E++ F AV+A CEGL++K++ RD
Sbjct: 363 TLKILPERREMLRKIIDESEEF-KLAEGMIVNNTAELETFFLKAVEAGCEGLVVKSLGRD 421
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+ Y+ R W+K K+DY + D++DLV + AFHGRGKR G YGA LLA YD ++ F
Sbjct: 422 SVYQAGVRGWLWIKYKRDYKSEMTDTVDLVVVGAFHGRGKRAGTYGALLLAAYDPESDTF 481
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPAS 742
+++CK+GTGF++ L E L + P ++R I DVWFEP E + + +
Sbjct: 482 KTVCKVGTGFTDEELAELPKKLEPYRL--PHKHHRVDSDIEADVWFEPAVVMEVTGAELT 539
Query: 743 I 743
+
Sbjct: 540 L 540
>gi|344244700|gb|EGW00804.1| DNA ligase 1 [Cricetulus griseus]
Length = 636
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/259 (49%), Positives = 179/259 (69%), Gaps = 18/259 (6%)
Query: 472 EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
+ G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I PFQ L+
Sbjct: 315 QGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLT 374
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
TR RK V S+I+V VC+YAFD++ G+ L+++ L RR+ L ++F E G F FAT+L
Sbjct: 375 TRKRKEVDASEIQVQVCLYAFDLICLQGESLIRQPLSRRRQLLRENFVETEGEFVFATSL 434
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
+ D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKD++ +GD+LDL
Sbjct: 435 DTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDFLVGVGDTLDL 494
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
V I A+ GRGKR G YG FLLA YD +EE Q+ICK + V+P
Sbjct: 495 VVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICK------------------ALVLPT 536
Query: 712 PRPYYRFADTISPDVWFEP 730
PRPY R ++PD W +P
Sbjct: 537 PRPYVRIDGAVAPDHWLDP 555
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 102/157 (64%)
Query: 205 NETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAE 264
ET + + + + N+LR+V+ +P DL+PV+YL+ N++ P +GLELG+GD ++KA+A+
Sbjct: 142 EETKGLKMVETLSNLLRSVVALSPPDLLPVLYLSLNRLGPPQQGLELGVGDGVLLKAVAQ 201
Query: 265 ACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
A GR ++ + E GD+GLVA+ SRS+Q +M P PLT + VF F IA+ G S
Sbjct: 202 ATGRQLESIRAEVAEKGDVGLVAENSRSTQRLMLPPPPLTTSGVFTKFCDIARLTGSASM 261
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQ 361
KK + IK L VA E +++ R L +LR+GLAEQ
Sbjct: 262 AKKLDVIKGLFVACRHSEARFIARSLSGRLRLGLAEQ 298
>gi|232006|sp|Q02093.1|DNLI_ACIAM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|40786|emb|CAA45034.1| DNa ligase [Acidianus ambivalens]
Length = 600
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/577 (30%), Positives = 307/577 (53%), Gaps = 42/577 (7%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++ + +T + VVY+ K+ P G+ EL
Sbjct: 3 FKIIAEYFDRLEKISSRLQLTSLLADLFK---KTDKNVIDKVVYIIQGKLWPDFLGMPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA---KASRSSQSMM------RKPDP 302
GIG+ +I+AL+ A ++ ++K Y+ +GDLG VA K + S S++ + P
Sbjct: 60 GIGEKFLIRALSIATSVSDDEIEKMYKSVGDLGQVAFDIKQKQQSASILAFLGAQKASKP 119
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LT+ KV+D +A G+ S++ K + LL A+ E +YL+R + +LR+G+ + T
Sbjct: 120 LTVEKVYDDLAKVATSTGEGSRDIKIRLLAGLLKDASPLEAKYLVRFVDGRLRVGIGDAT 179
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL Q+ +P IV++ +++ I L G+ L N
Sbjct: 180 ILDALA-ITFGGGQNFRP-------------IVERAYNLRADLGNIAKILANGGIEQLKN 225
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
PGIPI PMLA+ +E+++K ++ +YKYDGER QIH D + I+SR
Sbjct: 226 IKP-QPGIPIRPMLAERLSDPAEMLSKVGNIAL-VDYKYDGERGQIHKAGD-KIFIFSRR 282
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
E T ++PDV +S+ K + F+++ EI+ D E ++ PFQ L R RK+
Sbjct: 283 LENITNQYPDVAEYISKYVKGN--EFIVEGEIIPVDPETGEMRPFQELMHRKRKSDIHEA 340
Query: 543 IK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
IK V ++ FD++Y G+ + L RR+ L +S E+ + AT + + +++++++
Sbjct: 341 IKEYPVNVFLFDLMYYEGEDYTVKPLSERRKKL-ESIVEDNDYVHIATHIITDNVEKLKE 399
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
F A+ EG+++K++ DA Y+ R W+K K+DY + D++DLV + AFHG+G
Sbjct: 400 FFYQAISEGAEGVMVKSLAPDAIYQAGSRGWLWIKFKRDYQSEMADTVDLVMVGAFHGKG 459
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV--IPKPRPYYRFA 719
++ G Y +FL+A Y+ + + F+++CK+ +GF++A L++ L+ K+ + + P+ R
Sbjct: 460 RKGGKYSSFLMAAYNPDKDVFETVCKVASGFTDAELDD----LQKKIAELKRDTPHPRVV 515
Query: 720 DTISPDVWFEPTERPETSNSPASIVYDSQITCLPSSY 756
T+ PDVW P E A I TC Y
Sbjct: 516 STMVPDVWLTPALVAEIIG--AEITISPLHTCCKDQY 550
>gi|224487994|sp|A3DP49.2|DNLI_STAMF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
Length = 597
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 190/556 (34%), Positives = 303/556 (54%), Gaps = 41/556 (7%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+PF L+ F+ I T R +T ++ N+ + +T PE + VVYL ++ P +GL
Sbjct: 1 MPFRELADTFERIEIITSRTQMTVLLVNLFK---KTPPEIIDKVVYLLQGRLWPDWKGLP 57
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA------------KASRSSQSMM 297
ELG+G+ +IKA+A A TES V+ Y+ +GDLG A K + S + +
Sbjct: 58 ELGVGEKMLIKAIALATQSTESEVESLYKSLGDLGKAAEKLKAIYEEKLKKGAMSILAFV 117
Query: 298 RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIG 357
LT+++V++T +A G+ S++ K + LL A+ E +Y+IR ++ +LR+G
Sbjct: 118 PVKRELTVSQVYETLSRVALATGEGSRDIKLKLLAGLLSDASPKEAKYIIRFVEGRLRLG 177
Query: 358 LAEQTLLAALGQAAVYNE-QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
+ + T++ AL A VY H++P IV++ +++ I L T G
Sbjct: 178 IGDATIMDAL--AIVYGGGAHARP-------------IVERAYNLRADLGHIAKILATQG 222
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ N GIPI PMLA+ EI+ K + F EYKYDGERAQIH L D +
Sbjct: 223 L-NALKGIKPQVGIPIRPMLAERLNNPVEILKKVGGIAF-VEYKYDGERAQIHKLGD-KI 279
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
IYSR E T ++PDVV + K + +++ EIVAYD + ++ PFQ L R RK
Sbjct: 280 WIYSRRLENITHQYPDVVDYARKYIKAN--EAIVEGEIVAYDPDTGELRPFQELMHRKRK 337
Query: 537 -NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
++ ++ +V V +Y FD+LY +G+ + L RR L + E+ F Q A + + +
Sbjct: 338 HDIHIAIKEVPVKVYLFDLLYVDGEDYTLKPLPERRAKLVEIIEQTETF-QIAEYIRTNN 396
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
DE++KF A++ EG++IK + ++A Y+ R W+K K+DY + D++DLV I
Sbjct: 397 PDELEKFFLKAIEDGAEGVMIKALHKNAIYQAGTRGWLWIKYKRDYKSEMIDTVDLVVIG 456
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
AF+GRG+R G YGA L+A Y+ + + F+S+CK+G+GF + +++ L+ +I P
Sbjct: 457 AFYGRGRRGGKYGALLMASYNPDKDVFESVCKVGSGFKDEDIDKLPEMLKPYIIEHKHP- 515
Query: 716 YRFADTISPDVWFEPT 731
R + PDVW P
Sbjct: 516 -RVVARMKPDVWVTPA 530
>gi|405117922|gb|AFR92697.1| DNA ligase [Cryptococcus neoformans var. grubii H99]
Length = 877
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 200/658 (30%), Positives = 308/658 (46%), Gaps = 131/658 (19%)
Query: 177 FDPKMV--ACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
FDP V W KG R+P+ L VF L +M +P DL
Sbjct: 180 FDPSRVIATSWPKG-RLPYSILVSVF-------------------LHLLMHASPSDLTSC 219
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
+YL +N +AP++ +LGIG + + K++ E G +K+ +Q+ GD G VA +RS
Sbjct: 220 LYLLSNHLAPSYIDCDLGIGSSILSKSIQEVSGLQARDLKQLWQKYGDPGDVAFEARSKL 279
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
+ +P PL +V+D I K G +S + K ++ LL+ A E ++L+R + L
Sbjct: 280 RTLVQPVPLLAGEVYDKLLEITKVKGSNSGKIKNELVRKLLIRAKGEEVRFLVRSIVGNL 339
Query: 355 RIGLAEQTLLAALGQA-------------------AVYNEQH-------SKPPPNIQSPL 388
R TLL AL +A A N+ ++ PP+
Sbjct: 340 R------TLLTALARAMTIIRLPTDLKQSIIPLPKATVNDGRNDKRSAIARAPPDAARDT 393
Query: 389 EE-----AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
E A +IV++V+ P Y +V A L +GV +L N + GIP+ PML T+ +
Sbjct: 394 AETLCLDAIRIVRKVYVRHPNYGDLV-AGLKEGVESLENKVPVSVGIPLSPMLGSITRSL 452
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYL--------EDGSVEIYSRNAERNTGKF----- 490
+E+ + + FT E K DG+R Q+H + G +Y+ N + +
Sbjct: 453 NEVFTRLGHLSFTAEAKLDGQRGQLHIRLGGPEGKDDGGGRWVYADNGRKLWVRLFSRQS 512
Query: 491 PDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIY 550
P VL + L ++ S V+D EIVA D++ FQ LS RA+KNV + DIKV V ++
Sbjct: 513 PSRVLDL--LYISNITSVVMDTEIVALDKDTGNFRTFQELSNRAKKNVKMEDIKVVVGVF 570
Query: 551 AFDILYRNGQPLLQEQLRVRREHL------YDSFEEEPGF----FQFATTLTSIDLD--- 597
AFD++ N LL RR L + E G F ++ S DL
Sbjct: 571 AFDLMVLNDVSLLDVPFSHRRHLLRALLPPFAPISNEVGHPVARFTHVESIDSADLTDPS 630
Query: 598 -EIQKFLDAAVDASCEGLIIKTMDRD---------------------------------- 622
E+Q F + V+ CEGL++K ++
Sbjct: 631 VEMQAFFERVVEKKCEGLMVKILENGEGLAGEDATEGGFGQEGGLEVKSEQKNGGRSKRQ 690
Query: 623 ---ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNN 679
ATYEP +RS WLK+KKDY+E +GDSLDLVPI A+ G+G++ G + LLAC++ ++
Sbjct: 691 PLPATYEPDQRSQGWLKVKKDYLEGLGDSLDLVPIGAWWGQGRKAGWWSPILLACHNPDS 750
Query: 680 EEFQSICKIGTGFSEAMLEERSSSLRSKVIP----KPRPY-YRFADTISPDVWFEPTE 732
+++CK +GFS+A ++ S ++ +P K P + + + PDVWFEP+E
Sbjct: 751 GALEAVCKCMSGFSDAFYKDLSKRYPAEGMPSKCTKIAPIGFVNTNGLIPDVWFEPSE 808
>gi|374327751|ref|YP_005085951.1| DNA ligase [Pyrobaculum sp. 1860]
gi|356643020|gb|AET33699.1| DNA ligase [Pyrobaculum sp. 1860]
Length = 563
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 181/550 (32%), Positives = 283/550 (51%), Gaps = 43/550 (7%)
Query: 228 PEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA 287
PE++ +VY + P EG+ELG+ + I+AL++A G S ++ Y++ GD+G
Sbjct: 14 PEEIDKIVYFILGDLRPPWEGVELGVAEKLCIRALSKASGVPASELEALYKKTGDVG--- 70
Query: 288 KASRSSQSMMRKPD--------PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT 339
+A+R + S ++P PL +++V+D +A+ +G+ +Q+ K N + +L A+
Sbjct: 71 EAARRALSTSKRPGLLAFGSQKPLEVSEVYDVLLKVARASGEGAQDLKINLLSSLFARAS 130
Query: 340 DCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVF 399
E +Y+ R + +LR+G+A+ T++ L +A ++ + ++ L ++ + V
Sbjct: 131 PEEGKYIARFVVGRLRLGVADMTIIEGLSEAFGVEKESLERAYHVYPDL---GRLARHVA 187
Query: 400 SVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
P+ E T G+P+ PMLA+ SEI+ K CEY
Sbjct: 188 EGRPLEE-----------------IKITLGVPVLPMLAQRLSSASEILAKLGG-SAVCEY 229
Query: 460 KYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR 519
KYDGERAQIH L V+I+SR E T +PDVV AV + S +L+ EIVA D
Sbjct: 230 KYDGERAQIH-LSKAGVKIFSRRLEDITHAYPDVVKAVR--EAVSAGEAILEGEIVAVDP 286
Query: 520 EKQKILPFQTLSTRARKNVSLSDIKV-DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
+ +LPFQ L R RK+ + +++ +Y FD+LY +G+ L +E L RR L +
Sbjct: 287 DTGDMLPFQELMHRKRKHEVAAAVEMYPTVLYLFDVLYVDGEDLTEEPLIYRRVKLSEIV 346
Query: 579 EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638
+E A D D + F +V EGLI K+ + YE R NW+K K
Sbjct: 347 KESDKV-SIAKWRIFDDPDSVDVFFHESVSMGTEGLICKS--PTSVYEMGARGWNWIKYK 403
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
+DY + D++DLV + AFHGRGKR G+YGAFLLA YD + + F ++CK+G+GF++A L+
Sbjct: 404 RDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLAAYDPSTDMFYTVCKVGSGFTDADLK 463
Query: 699 ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASIVYDSQITCLPSSYMP 758
+ +L+ +P P R + DVWF P E A I TC + P
Sbjct: 464 KMYETLQPLKLPHRHP--RVVSKMEADVWFVPQVVIEVIG--AEITLSPLHTCCLGAVRP 519
Query: 759 FSRSYFRFGR 768
RF R
Sbjct: 520 GVGLAVRFPR 529
>gi|116204129|ref|XP_001227875.1| hypothetical protein CHGG_09948 [Chaetomium globosum CBS 148.51]
gi|88176076|gb|EAQ83544.1| hypothetical protein CHGG_09948 [Chaetomium globosum CBS 148.51]
Length = 813
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 190/618 (30%), Positives = 308/618 (49%), Gaps = 72/618 (11%)
Query: 47 LNPRRKMSSSAPNAFQVLMS-----AAAKKKPSPQPN-SSSSSSSPKKRRTLDTQTPKTT 100
LNP K +S+ + + A++ PS Q + + SS S + D + K
Sbjct: 10 LNPGAKQTSAPARGLEYFFAKQRQNASSSNTPSSQESMAQSSQPSDVNGQLTDEELAKKL 69
Query: 101 NS-----VVGEKIQEVAEEPSNDL------VKPISNQIDNPIDSEKESQPTPPSPKKRKV 149
+ V G Q P+ +L P + + P + P P K
Sbjct: 70 QAEWDAEVRGTSAQNTPHPPNQNLDAVGADAGPSTLETRTPAEPVASPSPQVPQAVKTTK 129
Query: 150 NVNSVSAKEKIAELKSNIVL----LKKKAGEFDPKMVACWE-KGERVPFIFLSLVFDMIS 204
++ SA ++ +++ L L + ++ PK+ W +G+ + L+ F +++
Sbjct: 130 TLSLSSASATADQITTSLPLDESPLTFEPTKYTPKLQEIWAAEGDDASYALLTRCFVLVN 189
Query: 205 NETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAE 264
RI I D + N +R ++E P L+P V+LA N I+P + +ELG+G A+I KAL +
Sbjct: 190 GTQSRIKIVDTLVNSIRLLIEGDPSSLLPAVWLATNAISPPYISMELGLGGAAISKALKQ 249
Query: 265 ACGRTESHVKKQYQEMGDLGLVAKASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDS 323
ACG + +K + ++GD G VA ++ QS +R+P PLTI VF + IA G+ S
Sbjct: 250 ACGLDQRALKALHDKLGDPGDVAFEAKKKQSFTLRRPKPLTIKGVFQSLVKIATAQGQGS 309
Query: 324 QEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPN 383
+ K Q LRIG + T+L AL +A + ++ PP
Sbjct: 310 GDIK-----------------------QRFLRIGAVKTTMLIALSRAFLLSK-----PPG 341
Query: 384 IQSPLEEA------------------AKIVKQVFSVLPVYEKIVPALLTDGVWN-LSNTC 424
P A ++VK ++ P Y ++P LL G+ + L C
Sbjct: 342 ASFPTHNAHDLAKLKKDELAEVWARGEELVKASYARHPDYNDLIPVLLEIGISDELLIRC 401
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
T IP+ PML T+ +SE++ K Q +F CEYKYDG+RAQ+H +G V I+SR+ E
Sbjct: 402 GLTMHIPLRPMLGSITRDLSEMLTKLQGRDFACEYKYDGQRAQVHCDLNGKVSIFSRHLE 461
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
T K+PD+V V + + V SF+++ E+VA DR ++ FQTL+ RARK+V++ I
Sbjct: 462 LMTDKYPDLVALVPKFRGDGVESFIIEGEVVAVDRATGELKNFQTLTNRARKDVAIGAIT 521
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKF 602
+DVC+++FD++Y NG+ LL + R RR+ L F E P F + +L TS D + + +F
Sbjct: 522 IDVCLFSFDLMYLNGKSLLDQPFRRRRDLLRSLFVEIPHHFTWVKSLDATSQDSEPVLEF 581
Query: 603 LDAAVDASCEGLIIKTMD 620
+A++ CEG+++KT+D
Sbjct: 582 FKSALENKCEGIMVKTLD 599
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
ATYEP KR +WLK+KKDY + ++LDLVP+A +HG+G++ + LLA +
Sbjct: 660 ATYEPDKRLDSWLKVKKDY-SATSETLDLVPVAGWHGQGRKAQWWSPILLAVRNEETGCL 718
Query: 683 QSICKIGTGFSEAMLEE 699
+++CK +GF++ E
Sbjct: 719 EAVCKCMSGFTDRFYRE 735
>gi|193084345|gb|ACF10002.1| ATP-dependent DNA ligase [uncultured marine crenarchaeote
SAT1000-49-D2]
Length = 585
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 180/546 (32%), Positives = 286/546 (52%), Gaps = 37/546 (6%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGL 249
+ F ++ +F+ + N T RI +T+I+ +L+ TP+ ++P VYL I P EG+
Sbjct: 1 MDFSIVAEIFEKMENTTKRIELTNILVELLKK----TPKKIIPNAVYLLQGIIRPNFEGV 56
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMR-KPDPLTITKV 308
ELGI + I+A++++ G + ++ Y+E GDLGL A ++ + +T+ +V
Sbjct: 57 ELGIAEKLAIRAISKSAGLSIKKIEDDYRESGDLGLTASNILKIKTQTTFTAEKITVERV 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
++T IAK GK SQ+ K I +LL AT E ++++++L LR+G+AE T++ AL
Sbjct: 117 YETLFKIAKLEGKGSQDLKMKYISSLLNDATPLEAKFVLKILLGTLRLGIAENTVMDALA 176
Query: 369 QAAV---YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCS 425
A N + + N+ S L + + IV TDG+ +
Sbjct: 177 IAFTGKKENREQIENAYNVSSDLGKVSLIVA-----------------TDGIDEIKK-FK 218
Query: 426 FTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAER 485
+ PI PMLA + +++ K + +F EYK DGER QIH D + ++SR E
Sbjct: 219 ISLFSPIRPMLADRVQSEKDVIKKMPE-QFAAEYKLDGERVQIHKQSDKII-LFSRRLEN 276
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIK 544
T +PD+V + K +V + + EIV + LPFQ L R RK + + +
Sbjct: 277 ITQYYPDIVENIG--KSLNVNEGIFEAEIVPINENTGDFLPFQELMHRRRKYKLDEAVSQ 334
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + FD+LY + + L + RR+ L + E F + L + +EI+ FL+
Sbjct: 335 YPITVNFFDVLYFDKKDCLNLEYSERRKIL-EQIIHEDNFSKLVPMLFVKNENEIEDFLE 393
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
+++A CEGL++KT A Y R NWLKLK++Y +GDS DL+ I A+ GRG+RT
Sbjct: 394 NSINAGCEGLMLKT--PSAPYRAGTRGSNWLKLKREYRNELGDSFDLIVIGAYFGRGRRT 451
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
G+YG LLA Y+ + F SICK+GTGF++ L++ L + V K R +
Sbjct: 452 GLYGTLLLATYNPEKDNFPSICKVGTGFTDESLDQLYQILSNNVTLKKNS--RIVSEMEA 509
Query: 725 DVWFEP 730
DVWFEP
Sbjct: 510 DVWFEP 515
>gi|393795129|ref|ZP_10378493.1| ATP-dependent DNA ligase I [Candidatus Nitrosoarchaeum limnia BG20]
Length = 590
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 179/551 (32%), Positives = 289/551 (52%), Gaps = 45/551 (8%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGL 249
+ F LS F + + T R+ +T L + E TP+D++ +VYL K+ P EG+
Sbjct: 1 MEFSILSEAFSKMESTTKRLELT----QHLVELFEKTPQDVISRIVYLLQGKLRPDFEGV 56
Query: 250 ELGIGDASIIKALAEACG--RTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTI 305
ELG+ + I+A+A++ G E ++ +Y++ GDLG A + Q+ D +T+
Sbjct: 57 ELGVAEKLAIRAIAKSAGSDNAEKKIEDEYRKSGDLGHAASKILEQKEQTTFMVQD-ITV 115
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
+V++ IAK G +Q++K I LL A E ++++++L LR+G+AE T++
Sbjct: 116 ERVYENLVTIAKLEGNKTQDRKMKYISGLLNDANPEESKFILKILLGTLRLGIAENTVMD 175
Query: 366 ALGQAAVYNEQHSKP---PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
AL A N+++ K N+ S L + A+ + + L
Sbjct: 176 ALAIAFTGNKENRKALEHAYNVSSDLGKVAETI--------------------AIKGLKG 215
Query: 423 TCSFTPGI--PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
F + PI PMLA K E + K +F EYK DGER Q+H +E V ++S
Sbjct: 216 IEEFEINLFNPIRPMLADRVKSEEEAIEKL-GAQFAAEYKLDGERVQLH-IEGDKVVLFS 273
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVS 539
R+ E T +PD+V + K +L+ E VA + + LPFQ L R RK +
Sbjct: 274 RSLENITSYYPDIVEKIP--KAIQANKVILEAEAVAINENSGEFLPFQELMHRRRKYQIE 331
Query: 540 LSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEI 599
+ ++ + + FD+LY +G+ L+ + RRE L +E+ T+ + + ++I
Sbjct: 332 KAVLQYPITVNFFDVLYYDGKSCLEFPYKERRELLEKIVKEDEYAKHVPMTIIN-NQEDI 390
Query: 600 QKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
++FL+ ++++ CEG+++K +D+ Y+ R WLKLK++Y +GDSLDLV I AF G
Sbjct: 391 EEFLENSINSGCEGVMLKMLDK--PYQAGSRGSYWLKLKREYRNELGDSLDLVVIGAFFG 448
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFA 719
+G+RTG YG LLA YD + + F SICK+GTGF++ L++ L KV K P R
Sbjct: 449 KGRRTGKYGTLLLASYDYDRDMFTSICKVGTGFTDDDLDQLYQILSDKVTIKKNP--RID 506
Query: 720 DTISPDVWFEP 730
+ DVWFEP
Sbjct: 507 SEMEADVWFEP 517
>gi|307595638|ref|YP_003901955.1| ATP-dependent DNA ligase I [Vulcanisaeta distributa DSM 14429]
gi|307550839|gb|ADN50904.1| DNA ligase I, ATP-dependent Dnl1 [Vulcanisaeta distributa DSM
14429]
Length = 607
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 189/595 (31%), Positives = 287/595 (48%), Gaps = 50/595 (8%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+ FI + + I T R ++ ++ ++L+ +T P + V+Y ++ P EG+E
Sbjct: 8 IKFIDVVKALESIEATTQRTVMAKLLSSLLK---KTPPNVIDKVIYFILGQLRPDWEGVE 64
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ------------SMMR 298
LG+ + +A+A A G ++ Y+ +GD+G A+ SS+
Sbjct: 65 LGVAEKLTFRAIANATGAPIKQIEDLYKRLGDVGETARRIMSSKPQQGGGKSILEFFGGG 124
Query: 299 KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGL 358
+ LT+ KV+DT IA+ +G+ +Q+ K + L A E +Y+ R + +LR+G+
Sbjct: 125 GGEELTMGKVYDTLMSIARASGEGAQDTKVKLLTYLFSRAKPEEAKYIARFVIGRLRLGV 184
Query: 359 AEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
A+ T+L AL A K P + LE A + + P I + +G
Sbjct: 185 ADMTILDALSDA-------YKVP---REALERA-------YHIYPDLGYIAKMVAQEG-Q 226
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
N TPG+PI PMLA+ +EI+ K + EYKYDGERAQIH DG + I
Sbjct: 227 NALAKIHVTPGVPIQPMLAERLSTSTEILAKLGGVAM-VEYKYDGERAQIHKTRDGEIRI 285
Query: 479 YSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+SR E T +PDV V + + ++++ EIVA D + + PFQ L R RK+
Sbjct: 286 FSRRLENITHAYPDVAEYVK--EAIDAKEYIVEGEIVAIDPDTGEFRPFQELMHRKRKH- 342
Query: 539 SLSDIK-----VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
DIK V I+ FDI+Y +GQ L L R+ L + + + AT
Sbjct: 343 ---DIKEAMKEYPVNIFLFDIMYIDGQDLTNLPLIDRKRKLLEVLKPSE-YVHLATWRII 398
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
D +E+ KF A+ CEG++ K++ D+ YE R W+K K+DY + D+LDLV
Sbjct: 399 NDAEELDKFFHEAISDGCEGVMCKSIKADSIYEMGARGWLWIKYKRDYRSELTDTLDLVV 458
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR 713
+ AF GRGKR G YGA L+A YD ++F ++ K+G+GF++ L + L IP
Sbjct: 459 VGAFWGRGKRAGTYGALLIAAYDPKTDQFYTVSKVGSGFTDEDLVKLKQMLDPYRIPHKH 518
Query: 714 PYYRFADTISPDVWFEPTERPETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
P R + PDVWF P E A I TC + P RF R
Sbjct: 519 P--RVVSKMEPDVWFVPAVVLEIIG--AEITLSPLHTCCMGAIRPGVGLAIRFPR 569
>gi|407462665|ref|YP_006773982.1| ATP-dependent DNA ligase I [Candidatus Nitrosopumilus koreensis
AR1]
gi|407046287|gb|AFS81040.1| ATP-dependent DNA ligase I [Candidatus Nitrosopumilus koreensis
AR1]
Length = 588
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 289/547 (52%), Gaps = 39/547 (7%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGL 249
+ F L+ F+ + + R+ +T + + E TP+D++ +VYL K+ P EG+
Sbjct: 1 MEFSVLADAFNKMESTRKRLELTQYLVELF----EKTPQDVISKIVYLLQGKLRPDFEGI 56
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITK 307
ELGI + I+A++++ G ++ +Y++ GDLG A + +Q+ D +T+ +
Sbjct: 57 ELGIAEKLAIRAISKSSGIPVKKIEDEYRKSGDLGHAATIILEQKTQTTFLVED-ITVER 115
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
V++T IAK G SQ+ K I +LL A+ E +++++L LR+G+AE T++ AL
Sbjct: 116 VYETLFKIAKSEGNRSQDMKMKYISSLLNDASPLEASFILKILLGTLRLGIAENTVMDAL 175
Query: 368 GQAAVYNEQHSK---PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
A N+++ K N+ S L + A+I+ + L EK+ L
Sbjct: 176 AMAFSGNKENRKVLEHAYNVSSDLGKVAEILAK--EGLEEVEKLKIILFN---------- 223
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
PI PMLA K E + K + F EYK DGER Q+H +E V ++SR+ E
Sbjct: 224 ------PIRPMLADRVKSEQEAIEKMGE-SFAAEYKLDGERVQLH-VEGDKVVLFSRSLE 275
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDI 543
+ +PD++ + K + +L+ E VA + + LPFQ L R RK + +
Sbjct: 276 NISSYYPDIIEKIP--KTIQAENIILEAEAVAINENTGEFLPFQELMHRRRKYKIEKAVT 333
Query: 544 KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFL 603
+ + + FDILY NG+ L+ + RRE L + +E F + + ++I+ F
Sbjct: 334 QYPITVNLFDILYCNGKSCLELAYKERREKL-EKVVKEDDFVKHIPMAIVKNENDIEDFF 392
Query: 604 DAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
+ +++A EGL++K +D+ Y+ R +WLKLK++Y +GDSLDLV I F G+G+R
Sbjct: 393 ENSINAGSEGLMLKMLDK--PYQAGSRGSHWLKLKREYQNELGDSLDLVVIGGFFGKGRR 450
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTIS 723
TG YG LLA Y+ + + F SICK+GTGFS+ L++ L KV K P R +
Sbjct: 451 TGSYGTLLLATYEEDEDTFTSICKVGTGFSDEDLDQLYQILNPKVTIKKNP--RIDSEME 508
Query: 724 PDVWFEP 730
DVWFEP
Sbjct: 509 ADVWFEP 515
>gi|327311493|ref|YP_004338390.1| ATP-dependent DNA ligase [Thermoproteus uzoniensis 768-20]
gi|326947972|gb|AEA13078.1| ATP-dependent DNA ligase [Thermoproteus uzoniensis 768-20]
Length = 594
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 284/546 (52%), Gaps = 38/546 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F L+ V I + T R + ++ + + + P ++ +Y+ + P EGLELG
Sbjct: 3 FSELAKVLASIESTTQRTTMVRLLVGLFKKL---EPAEIDKAIYIILGDLRPPWEGLELG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAK---ASRSSQSMMR----KPDPLTI 305
+G+ I+A+A A G +++ Y++ GD+G A+ + R +Q+++ + L+I
Sbjct: 60 VGEKLCIRAIARASGAKADEIEELYKKTGDMGEAARRALSRRQAQTLLAFAGGRKAGLSI 119
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
++V+DT +AK +G+ SQ+ K + + +L + E +Y+ R + +LR+G+A+ T++
Sbjct: 120 SQVYDTLFKVAKASGEGSQDLKISLLSSLFSQLSPDEAKYVARFVVGRLRLGVADMTVID 179
Query: 366 ALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCS 425
AL +A E+ + N++ L K+V + G L+
Sbjct: 180 ALAEAFGVPEEALERAYNVRPDLGFLGKLVAE-----------------RGAAGLAEV-R 221
Query: 426 FTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAER 485
TPG+P+ PMLA+ EI+ K CEYKYDGERAQIH DG V IYSR E
Sbjct: 222 ITPGVPVMPMLAQRLSTSREILAKLGGAAI-CEYKYDGERAQIHVSPDG-VAIYSRRLEN 279
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK- 544
T +PDVV +V K S R VL+ EIVA D + +LPFQ L R RK+ +K
Sbjct: 280 ITHAYPDVVESVR--KSVSAREAVLEGEIVAVDPDTGDLLPFQELMHRKRKHEVEEAVKE 337
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ FD+LY +G+ L + L RR L + EE L D +++ F
Sbjct: 338 YPAKLNLFDLLYLDGEDLTDKPLMYRRLKLSEIVEEGEDVVIAKWALFD-DEEKVDVFFH 396
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A+ EGL+ K+ + YE R NW+K K+DY + D++DLV + AF+GRGKR
Sbjct: 397 EAISMGMEGLVCKS--PTSVYEMGARGWNWIKYKRDYRSEMSDTVDLVVVGAFYGRGKRA 454
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
G+YGAFL A YD + F ++CK+G+GF++A L++ L I P R + + P
Sbjct: 455 GLYGAFLTAAYDPKTDTFYTVCKVGSGFTDADLKKMYQMLEPYKIDHRHP--RVSSRMEP 512
Query: 725 DVWFEP 730
DVWF P
Sbjct: 513 DVWFTP 518
>gi|167043262|gb|ABZ07968.1| putative DNA ligase N-terminal domain [uncultured marine
crenarchaeote HF4000_ANIW141M12]
Length = 585
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 176/546 (32%), Positives = 289/546 (52%), Gaps = 37/546 (6%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGL 249
+ F ++ +F+ + N T RI +T+I+ +L+ TP+ ++P VYL I P EG+
Sbjct: 1 MDFSIVAEIFEKMENTTKRIELTNILVELLKK----TPKKIIPNAVYLLQGIIRPNFEGV 56
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMR-KPDPLTITKV 308
ELGI + I+A++++ G + ++ Y+++GDLGL A ++ + +T+ +V
Sbjct: 57 ELGIAEKLAIRAISKSSGLSIKKIEDDYRKVGDLGLTASNILKLKTQTTFTAEKITLERV 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
++T IAK GK SQ+ K I +LL AT E ++++++L LR+G+AE T++ AL
Sbjct: 117 YETLFKIAKLEGKGSQDLKMKHISSLLNDATPLEAKFVLKILLGTLRLGVAENTVMDALA 176
Query: 369 QAAV---YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCS 425
A N++ + N+ S L + +++V T+G+ +
Sbjct: 177 IAFTGKKENKERIENAYNVSSDLGKVSQMVA-----------------TNGIDGIKK-FK 218
Query: 426 FTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAER 485
+ PI PMLA K E + K ++ F+ EYK DGER QIH + + ++SR E
Sbjct: 219 ISLFSPIRPMLADRVKSEKEAIKKMPEL-FSAEYKLDGERVQIHK-QANKIILFSRRLEN 276
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIK 544
T +PD+V + K +V + + EIV + + LPFQ L R RK + + ++
Sbjct: 277 ITQYYPDIVENIG--KSLNVHEGIFEAEIVPINENTGEFLPFQELMHRRRKYKLEQAVLQ 334
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + FD+LY + + L + RR+ L + E F + L + +E+ FL+
Sbjct: 335 YPITVNFFDVLYFDNKDCLNLEYSERRKIL-EKLVNEDNFSKLVPMLLVKNENEVGDFLE 393
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
+++A CEGL++KT A Y R NWLKLK++Y +GDSLDL+ I A+ GRG+RT
Sbjct: 394 NSINAGCEGLMLKT--PSAPYRAGSRGSNWLKLKREYRNELGDSLDLIVIGAYFGRGRRT 451
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
G+YG LL Y+ + F SICK+GTGF++ L++ L + V K R +
Sbjct: 452 GLYGTLLLGTYNPEQDNFPSICKVGTGFTDESLDQLYQILSNNVTLKKNS--RIISEMEA 509
Query: 725 DVWFEP 730
DVW EP
Sbjct: 510 DVWLEP 515
>gi|297527107|ref|YP_003669131.1| DNA ligase I, ATP-dependent Dnl1 [Staphylothermus hellenicus DSM
12710]
gi|297256023|gb|ADI32232.1| DNA ligase I, ATP-dependent Dnl1 [Staphylothermus hellenicus DSM
12710]
Length = 611
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 195/593 (32%), Positives = 309/593 (52%), Gaps = 43/593 (7%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+PF L+ F+ I T R +T ++ N+ + +T PE + VVYL ++ P +GL
Sbjct: 15 MPFRELADTFERIEVITSRTQMTVLLVNLFK---KTPPEIIDKVVYLLQGRLWPDWKGLP 71
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA------------KASRSSQSMM 297
ELG+G+ ++KA+A A ES V+ Y+ +GDLG A K + S + +
Sbjct: 72 ELGVGEKMLVKAIALATQSRESEVESLYKSLGDLGKAAEKLKAKYEEKLKKGAMSILAFV 131
Query: 298 RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIG 357
LT+ +V++T +A G+ S++ K + LL A+ E +Y+IR ++ +LR+G
Sbjct: 132 PAKKELTVGQVYETLSRVALATGEGSRDIKLKLLAGLLSDASPKEAKYIIRFVEGRLRLG 191
Query: 358 LAEQTLLAALGQAAVYNE-QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
+ + T++ AL A VY H++P IV++ +++ I L T G
Sbjct: 192 IGDATIMDAL--AIVYGGGAHARP-------------IVERAYNLRADLGHIAKILATQG 236
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ L GIPI PMLA+ EI+ K F EYKYDGERAQIH L D +
Sbjct: 237 LEALKGIKP-QVGIPIRPMLAERLNNPVEILKKVGGDSF-VEYKYDGERAQIHKLGD-KI 293
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
IYSR E T ++PDVV + K +++ EIVAYD + ++ PFQ L R RK
Sbjct: 294 WIYSRRLENITHQYPDVVDYARKYIKAD--EAIVEGEIVAYDPDTGELRPFQELMHRKRK 351
Query: 537 -NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
++ ++ +V V ++ FD+LY +G+ + L RR L + E+ F Q A + + D
Sbjct: 352 HDIHIAIKEVPVKVFLFDLLYVDGEDYTLKPLPERRAKLEEIIEQTETF-QIAEYIRTND 410
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
DE++KF A++ EG++IK + ++A Y+ R W+K K+DY + D++DLV I
Sbjct: 411 PDELEKFFFKAIEDGAEGVMIKALHKNAIYQAGTRGWLWIKYKRDYKSEMIDTVDLVIIG 470
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
AF+GRG+R G YGA L+A Y+ + + F+S+CK+G+GF + +++ L+ +I P
Sbjct: 471 AFYGRGRRGGKYGALLMASYNPDKDVFESVCKVGSGFKDEDIDKLPEMLKPYIIEHKHP- 529
Query: 716 YRFADTISPDVWFEPTERPETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
R + PD+W P E A + TC + P RF R
Sbjct: 530 -RVVARMKPDIWVTPALVAEIIG--AELTLSPLHTCCLDAIKPGVGISIRFPR 579
>gi|164660400|ref|XP_001731323.1| hypothetical protein MGL_1506 [Malassezia globosa CBS 7966]
gi|159105223|gb|EDP44109.1| hypothetical protein MGL_1506 [Malassezia globosa CBS 7966]
Length = 701
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 150/394 (38%), Positives = 224/394 (56%), Gaps = 38/394 (9%)
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTV-----------METTPEDLVPVVY 236
G +P+ L F + + R+ I ++V + V ++ E+L+ VY
Sbjct: 118 GAPIPYATLVDTFSKVEATSKRLEILELVTQLFLQVIYSSRGGDDKPLKAASENLLYTVY 177
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++ P +EGLELGIG+ ++KA+A++ GR +K+ ++ +GDLGLVA S+ +Q
Sbjct: 178 LCINRLCPDYEGLELGIGEGLLVKAIAQSTGREIVRIKRDFERLGDLGLVAHTSKKNQPT 237
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M + LT+ VF + IA +G SQ+KK IK LL + E +YLIR L+ KLRI
Sbjct: 238 MFRAQALTVRSVFQQLKQIAAASGAKSQDKKLGIIKRLLATCSGEESKYLIRSLEGKLRI 297
Query: 357 GLAEQTLLAALGQAAVYNEQHSKP--------------PPNIQSPLEEAAKIVKQVFSVL 402
GLAE+T+L A+ QA + KP + LE+ VK VFS +
Sbjct: 298 GLAEKTVLVAVAQAVMLATHDGKPHEPKQARDAGDANDAAKLTERLEQGTHTVKAVFSEV 357
Query: 403 PVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYD 462
P Y+ ++PALL GV ++ +PGIP+ PMLAKPTK + E++++F+ FTCEYKYD
Sbjct: 358 PSYDLLIPALLEHGVEHVQEHLKLSPGIPLKPMLAKPTKAIGEVLDRFEAHAFTCEYKYD 417
Query: 463 GERAQIHYLE--DG--SVEIYSRNAERNTGKFPDVVLAVS---RLKKPSVRSFVLDCEIV 515
GERAQ+H DG V ++SRN+E + K+PD+V+ + R +V+SFVLD E V
Sbjct: 418 GERAQVHGFRGSDGQLQVRVFSRNSEDMSVKYPDLVVQIPHCLRGGGENVQSFVLDAEAV 477
Query: 516 AYD------REKQKILPFQTLSTRARKNVSLSDI 543
A+ + ++LPFQ LS R RK+V +D+
Sbjct: 478 AWQPRDEASHTEGRLLPFQELSRRKRKDVQATDM 511
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
Query: 622 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEE 681
DATYEPS+RS+NWLKLKKDY+ GDSLDL I A++GRGKRT VYGAFLLACYD ++E
Sbjct: 516 DATYEPSRRSINWLKLKKDYLSGTGDSLDLTVIGAYYGRGKRTNVYGAFLLACYDEDSET 575
Query: 682 FQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
+QSICKIGTGFSEA L+ S+L+ IP+ + YY + PDV+FEP
Sbjct: 576 YQSICKIGTGFSEADLDAHYSTLKELEIPRKKGYYDLGEA-KPDVFFEP 623
>gi|161528545|ref|YP_001582371.1| ATP-dependent DNA ligase I [Nitrosopumilus maritimus SCM1]
gi|224487905|sp|A9A3K1.1|DNLI_NITMS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|160339846|gb|ABX12933.1| DNA ligase I, ATP-dependent Dnl1 [Nitrosopumilus maritimus SCM1]
Length = 588
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 176/546 (32%), Positives = 292/546 (53%), Gaps = 37/546 (6%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGL 249
+ F L+ F+ + + R+ +T + + + TP++++ +VYL K+ P EG+
Sbjct: 1 MEFSILADSFNKMESTRKRLELTQYLVELFKK----TPQEVISKIVYLLQGKLRPDFEGV 56
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITK 307
ELG+ + I+A++++ G ++++Y++ GDLG A + +Q+ D +T+ +
Sbjct: 57 ELGVAEKLAIRAISKSSGIPIKKIEEEYRKGGDLGHAATTILEQKTQTTFLVED-ITVER 115
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
V++T IAK G SQ+ K I +LL A+ E +++++L LR+G+AE T++ AL
Sbjct: 116 VYETLFKIAKLEGNRSQDMKMKYISSLLNDASPLEASFILKILLGTLRLGIAENTVMDAL 175
Query: 368 GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
A N+++ K I++ ++V K+ L T+G L+ F
Sbjct: 176 ALAFSGNKENRK--------------ILEHAYNVSSDLGKVAEVLATEG---LAEVEKFK 218
Query: 428 PGI--PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAER 485
+ PI PMLA K E + K + EF EYK DGER Q+H +E V ++SR+ E
Sbjct: 219 IILFNPIRPMLADRVKSEQEAIEKMGN-EFAAEYKLDGERVQLH-IEGDKVVLFSRSLEN 276
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIK 544
+ +PD++ + K + VL+ E VA + + LPFQ L R RK + + +
Sbjct: 277 ISSYYPDIIEKIP--KTIQAENIVLEAEAVAINENTGEFLPFQELMHRRRKYKIEKAVTQ 334
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + FDILY NG+ L+ + RRE + + +E F + + ++I+ F +
Sbjct: 335 YPITVNLFDILYCNGKSCLELDYKERREKM-EKVVKEDDFVKHIPMAIVKNENDIEDFFE 393
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
+++A EGL++KT+ + Y+ R +WLKLK++Y +GDSLDLV I F G+G+RT
Sbjct: 394 NSINAGSEGLMLKTLV--SPYQAGSRGSHWLKLKREYQNELGDSLDLVVIGGFFGKGRRT 451
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
G YG LLA Y+ + + F SICK+GTGFS+ L++ L KV K P R +
Sbjct: 452 GNYGTLLLATYEEDEDTFTSICKVGTGFSDEDLDQLYQILNPKVTIKKNP--RINSEMEA 509
Query: 725 DVWFEP 730
DVWFEP
Sbjct: 510 DVWFEP 515
>gi|70606581|ref|YP_255451.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius DSM 639]
gi|449066802|ref|YP_007433884.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius N8]
gi|449069075|ref|YP_007436156.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius Ron12/I]
gi|76364175|sp|Q4JAM1.1|DNLI_SULAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|68567229|gb|AAY80158.1| thermostable DNA ligase [Sulfolobus acidocaldarius DSM 639]
gi|449035310|gb|AGE70736.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius N8]
gi|449037583|gb|AGE73008.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius Ron12/I]
Length = 598
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 299/555 (53%), Gaps = 45/555 (8%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV-PVVYLAANKIAPAH-EG 248
+ F ++ FD + + RI +T ++ ++L+ + +D++ V+Y+ K+ P E
Sbjct: 1 MEFKLIAEYFDRLEKISSRIQLTALLTDLLKK----SDKDVIDKVIYITQGKLWPDFFEK 56
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA---KASRSSQSMMR-----KP 300
E+G+G+ +IKAL+ + E ++KQ + +GDLG VA K + SSQ+++ K
Sbjct: 57 PEIGLGEKLMIKALSVSTNIKEDEIEKQLRILGDLGEVAYKLKRTNSSQNVLSYLGSTKV 116
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
LT+ +V+++ IA G+ S++ K + LL A E +Y+IR + +LR+G+ +
Sbjct: 117 TKLTVEEVYESLSKIALSEGEGSRDMKIRSLAGLLKKADPLEAKYIIRFIDGRLRVGIGD 176
Query: 361 QTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL 420
T++ AL A V+ + P ++++ +++ I L +G+ +
Sbjct: 177 ATIMDAL--ANVFGGGTAARP------------LIERAYNLRADLGNIAKLLAENGIETI 222
Query: 421 SNTCSFTP--GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
S P GIPI PMLA+ SEI+ K + +YKYDGERAQIH + V I
Sbjct: 223 K---SIKPEVGIPIRPMLAERLTDPSEILAKVGG-KGIVDYKYDGERAQIHK-KGEKVYI 277
Query: 479 YSRNAERNTGKFPDVVLAVSRLKKPSVRS--FVLDCEIVAYDREKQKILPFQTLSTRARK 536
+SR E T ++PDVV + K S++S +L+ EIVA D+E +ILPFQ L R RK
Sbjct: 278 FSRRLENITRQYPDVVEYI----KNSIKSNEVILEGEIVAIDKESGEILPFQNLMHRKRK 333
Query: 537 NVSLSDIK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
N IK V +Y FD++Y +G+ Q+ L RRE L + + + A
Sbjct: 334 NDIGEAIKEYPVNVYLFDLMYNDGEDYTQKPLPDRREKL-EEIVTQNDIVKVADHKYIDK 392
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
++E+ ++ A+ EG+I+K++ +D+ Y+ R W+KLKKDY + DS+DLV +
Sbjct: 393 VNELVEYFHQAISDGTEGVIVKSIGKDSIYQAGARGFLWIKLKKDYQSEMADSVDLVIVG 452
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
AF+GRGKR G + L+A YD + + F ++CK+ +GFS+A LEE L + K P
Sbjct: 453 AFYGRGKRGGKLSSLLMAAYDPDKDTFYTVCKVASGFSDAELEEVQKMLSEAKLDKKDP- 511
Query: 716 YRFADTISPDVWFEP 730
R I PD+W +P
Sbjct: 512 -RVESEIQPDIWVKP 525
>gi|340345096|ref|ZP_08668228.1| DNA ligase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520237|gb|EGP93960.1| DNA ligase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 590
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 292/550 (53%), Gaps = 43/550 (7%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGL 249
+ F L+ F + + T R+ +T L + E TP+D++ +VYL K+ P EG+
Sbjct: 1 MEFAILADAFSKMESTTKRLELT----QHLVELFEKTPQDVISRIVYLLQGKLRPDFEGV 56
Query: 250 ELGIGDASIIKALAEACGR--TESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTI 305
ELG+ + I+A+A++ G E ++++Y++ GDLG A + Q+ D +T+
Sbjct: 57 ELGVAERLAIRAIAKSAGSDSAEKKIEEEYRKSGDLGHAASKILEQKEQTTFMMQD-ITV 115
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
+V++ IAK G +Q++K I LL A E ++++++L LR+G+AE T++
Sbjct: 116 ERVYENLLTIAKLEGSKTQDRKMKYISGLLNDANPNEAKFILKILLGTLRLGVAENTVMD 175
Query: 366 ALGQAAVYNEQHSKP---PPNIQSPLEEAAK-IVKQVFSVLPVYEKIVPALLTDGVWNLS 421
AL A N+++ K N+ S L + A+ I + + +E NL
Sbjct: 176 ALAIAFTGNKENRKALEHAYNVSSDLGKVAETIASKGLKGIEEFE-----------INLF 224
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
N PI PMLA K E + K ++ F EYK DGER Q+H +E V ++SR
Sbjct: 225 N--------PIRPMLADRVKSEEEAIEKLGNV-FAAEYKLDGERVQLH-IEGEKVILFSR 274
Query: 482 NAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSL 540
+ E T +PD+V + K + +L+ E VA + + LPFQ L R RK V
Sbjct: 275 SLENITSYYPDIVEKIP--KTIQAQKVILEAEAVAINENTGEFLPFQELMHRRRKYQVEK 332
Query: 541 SDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
+ + + + FD+LY +G+ L+ RR +L + +E + + ++I+
Sbjct: 333 AVSQYPITVNFFDVLYYDGKSCLELPYEERR-NLLEKIVKEDDYAKHIPMSMVKSQEDIE 391
Query: 601 KFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
+FL+ ++++ CEG+++K +D+ Y+ R WLKLK++Y +GDSLDLV I AF G+
Sbjct: 392 EFLENSINSGCEGVMLKMLDK--PYQAGSRGSYWLKLKREYRNELGDSLDLVVIGAFFGK 449
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD 720
G+RTG YG LLA YD + + F SICK+GTGF++ L++ L +KV K P R
Sbjct: 450 GRRTGKYGTLLLASYDYDTDVFTSICKVGTGFTDEDLDQLYQILSNKVTIKKNP--RIDS 507
Query: 721 TISPDVWFEP 730
+ DVWFEP
Sbjct: 508 DMEADVWFEP 517
>gi|329765374|ref|ZP_08256954.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329138280|gb|EGG42536.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 578
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 279/523 (53%), Gaps = 35/523 (6%)
Query: 216 VCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESH 272
+ L + E TP+D++ +VYL K+ P EG+ELG+ + I+A+A++ G E
Sbjct: 10 LTQHLVELFEKTPQDVISRIVYLLQGKLRPDFEGVELGVAEKLAIRAIAKSAGSDNAEKK 69
Query: 273 VKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNR 330
++ +Y++ GDLG A + Q+ D +T+ +V++ IAK G +Q++K
Sbjct: 70 IEDEYRKSGDLGHAASKILEQKEQTTFMVQD-ITVERVYENLVTIAKLEGNKTQDRKMKY 128
Query: 331 IKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEE 390
I LL A E ++++++L LR+G+AE T++ AL A N+++ K LE
Sbjct: 129 ISGLLNDANPEESKFILKILLGTLRLGIAENTVMDALAIAFTGNKENRKA-------LEH 181
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI--PIGPMLAKPTKGVSEIVN 448
A ++V K+ + + G L F + PI PMLA K E +
Sbjct: 182 A-------YNVSSDLGKVAETIASKG---LKGIEEFEINLFNPIRPMLADRVKSEEEAIE 231
Query: 449 KFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSF 508
K +F EYK DGER Q+H +E V ++SR+ E T +PD+V + K
Sbjct: 232 KL-GTQFAAEYKLDGERVQLH-IEGDKVVLFSRSLENITSYYPDIVEKIP--KAIQANKV 287
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQL 567
+L+ E VA + + LPFQ L R RK + + ++ + + FD+LY N + L+
Sbjct: 288 ILEAEAVAINENSGEFLPFQELMHRRRKYQIEKAVLQYPITVNFFDVLYYNDKSCLEFPY 347
Query: 568 RVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEP 627
+ RRE L +E+ T+ + + ++I++FL+ ++++ CEG+++K +D+ Y+
Sbjct: 348 KKRRELLEKIVKEDDYAKHVPMTIIN-NQEDIEEFLENSINSGCEGVMLKMLDK--PYQA 404
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
R WLKLK++Y +GDSLDLV I AF G+G+RTG YG LLA YD + + F SICK
Sbjct: 405 GSRGSYWLKLKREYRNELGDSLDLVVIGAFFGKGRRTGKYGTLLLASYDYDRDMFTSICK 464
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
+GTGF++ L++ L KV K P R + DVWFEP
Sbjct: 465 VGTGFTDDDLDQLYQILSDKVTIKKNP--RIDSEMEADVWFEP 505
>gi|163782827|ref|ZP_02177823.1| DNA ligase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881948|gb|EDP75456.1| DNA ligase [Hydrogenivirga sp. 128-5-R1-1]
Length = 583
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 185/577 (32%), Positives = 287/577 (49%), Gaps = 36/577 (6%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ + I T R +T ++ + + ET PE + VVYL+ +IAP + GL+ G+
Sbjct: 6 LAEFYAKIEATTSRTQMTGLLVELFK---ETPPELIDKVVYLSVGRIAPEYTGLDYNFGE 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLI 315
I++LAE G E V+++ E+GDLG + + K L++ +V++T I
Sbjct: 63 KLAIRSLAEILGIDEHSVEERVVELGDLGDAGQKLYEEKGFQPK-GSLSVKEVYETLLEI 121
Query: 316 AKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE 375
AK +G + +KK K LL AT E +YL+R + KLR+G+ + T++ AL A ++
Sbjct: 122 AKTSGVGALKKKSELFKKLLSKATPLEVKYLLRTITEKLRLGMGDNTVMDALAVAFTGDQ 181
Query: 376 Q---HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
+ H + N+ S L A++ L+ G+ + G P+
Sbjct: 182 KNRVHIERAYNLSSDLGYVARV-----------------LVEKGLEGI-KAVKIEVGRPV 223
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
PMLA+ S I+ K EYKYDGER Q H D +YSR E T +FPD
Sbjct: 224 RPMLAERMAIPSLILKKLGG-RCGAEYKYDGERIQAHRKGD-EFWLYSRRLENITHQFPD 281
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI-KVDVCIYA 551
++ LK+ F+++ E V D +I PFQ L R K VS I K V +
Sbjct: 282 LI---EFLKESIPHDFIVELECVVIDPASGQIQPFQVLMNRKVKYVSRYHILKYPVAGFL 338
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASC 611
FDILY +G+ L + RRE L + + AT ++++++ F A++ C
Sbjct: 339 FDILYLDGEDLTLKPYPERRETL-ERVVKTTDRVNLATRKIVDNVEDLEAFFHQAIEDGC 397
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
EGL+ K++ ++ YE KR W+K K+DY + D+LDLV + AF+G+G+R G +G+ L
Sbjct: 398 EGLVCKSLAENSIYEAGKRGFLWIKYKRDYKSHLADTLDLVVVGAFYGKGQRAGHFGSLL 457
Query: 672 LACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
+ACYD ++F+++CK+GTGF+E ++ L+ I P R IS D+WFEP
Sbjct: 458 MACYDPETDQFKTVCKVGTGFTEDDFKKLEEILKDHRIDHRHP--RVNSIISADIWFEPF 515
Query: 732 ERPETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
E + A + Y TC P RF R
Sbjct: 516 LVLEITG--AELTYSPVHTCAWDKVKPGRGLGLRFPR 550
>gi|224487995|sp|A0RWD6.2|DNLI_CENSY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
Length = 589
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 286/544 (52%), Gaps = 37/544 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F L+ + + + R+ +T I+ +LR ET E + +VYL K+ P EG+ELG
Sbjct: 3 FSVLAGSLEKMESTAKRLELTGILEELLR---ETPHEVIAQIVYLIQGKLRPEFEGIELG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFD 310
+ + ++A++++ G + ++ Y+ GDLG A + + +Q+ + +T+ +V+D
Sbjct: 60 VAEKLAVRAVSKSSGMPAARIEAAYRRDGDLGRAASSILEQKTQTTF-LAEEITVERVYD 118
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
T IA+ G SQ+ K I +LL A+ + Y+++L+ LR+G+AE T++ AL A
Sbjct: 119 TLMRIARLEGARSQDMKMRHISSLLNDASPRDACYILKLILGTLRLGIAENTVMDAL--A 176
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
A + S P +++ ++V ++ A+ + G L F +
Sbjct: 177 AAFTGSKSNRPE------------LERAYNVSSDLGRVAEAVSSGG---LEAVRGFAVAV 221
Query: 431 --PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
PI PMLA + SE + K EYK DGER Q+H L G VE++SR+ E T
Sbjct: 222 FSPIRPMLADRVRSESEALEKM-GAGLAAEYKLDGERVQVH-LSGGRVELFSRSLENITA 279
Query: 489 KFPDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVD 546
+PD+V + RL+ R VL+ E VA + E + LPFQ L R RK ++ + ++
Sbjct: 280 YYPDIVERIPGRLR---AREAVLEAEAVAVNEETGEFLPFQELMHRRRKYDIDKAVMRYP 336
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
+ + FDILY +G+ L RR L + +E F + T D ++ L+ +
Sbjct: 337 ITVNFFDILYLDGRDCLGISYSERR-ALLEGVVDEDSFARCVPVSTIPDESALEDSLENS 395
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
++A CEGL++K D A Y R WLKLK++Y +GDSLDLV I AF G+G+RTG
Sbjct: 396 INAGCEGLMLKLPD--APYRAGSRGGYWLKLKREYRNELGDSLDLVIIGAFFGKGRRTGR 453
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
YG LLA YD + + F SICK+GTGF++ L++ L +V K P R + DV
Sbjct: 454 YGTLLLATYDDSRDTFPSICKVGTGFTDEDLDQLYQLLSPRVTLKRNP--RIDSGMEADV 511
Query: 727 WFEP 730
WF+P
Sbjct: 512 WFDP 515
>gi|118576214|ref|YP_875957.1| ATP-dependent DNA ligase [Cenarchaeum symbiosum A]
gi|118194735|gb|ABK77653.1| ATP-dependent DNA ligase [Cenarchaeum symbiosum A]
Length = 577
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 280/528 (53%), Gaps = 37/528 (7%)
Query: 209 RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR 268
R+ +T I+ +LR ET E + +VYL K+ P EG+ELG+ + ++A++++ G
Sbjct: 7 RLELTGILEELLR---ETPHEVIAQIVYLIQGKLRPEFEGIELGVAEKLAVRAVSKSSGM 63
Query: 269 TESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEK 326
+ ++ Y+ GDLG A + + +Q+ + +T+ +V+DT IA+ G SQ+
Sbjct: 64 PAARIEAAYRRDGDLGRAASSILEQKTQTTF-LAEEITVERVYDTLMRIARLEGARSQDM 122
Query: 327 KKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQS 386
K I +LL A+ + Y+++L+ LR+G+AE T++ AL AA + S P
Sbjct: 123 KMRHISSLLNDASPRDACYILKLILGTLRLGIAENTVMDAL--AAAFTGSKSNRPE---- 176
Query: 387 PLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI--PIGPMLAKPTKGVS 444
+++ ++V ++ A+ + G L F + PI PMLA + S
Sbjct: 177 --------LERAYNVSSDLGRVAEAVSSGG---LEAVRGFAVAVFSPIRPMLADRVRSES 225
Query: 445 EIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV-SRLKKP 503
E + K EYK DGER Q+H L G VE++SR+ E T +PD+V + RL+
Sbjct: 226 EALEKM-GAGLAAEYKLDGERVQVH-LSGGRVELFSRSLENITAYYPDIVERIPGRLR-- 281
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPL 562
R VL+ E VA + E + LPFQ L R RK ++ + ++ + + FDILY +G+
Sbjct: 282 -AREAVLEAEAVAVNEETGEFLPFQELMHRRRKYDIDKAVMRYPITVNFFDILYLDGRDC 340
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRD 622
L RR L + +E F + T D ++ L+ +++A CEGL++K D
Sbjct: 341 LGISYSERR-ALLEGVVDEDSFARCVPVSTIPDESALEDSLENSINAGCEGLMLKLPD-- 397
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
A Y R WLKLK++Y +GDSLDLV I AF G+G+RTG YG LLA YD + + F
Sbjct: 398 APYRAGSRGGYWLKLKREYRNELGDSLDLVIIGAFFGKGRRTGRYGTLLLATYDDSRDTF 457
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
SICK+GTGF++ L++ L +V K P R + DVWF+P
Sbjct: 458 PSICKVGTGFTDEDLDQLYQLLSPRVTLKRNP--RIDSGMEADVWFDP 503
>gi|320100861|ref|YP_004176453.1| ATP-dependent DNA ligase I [Desulfurococcus mucosus DSM 2162]
gi|319753213|gb|ADV64971.1| DNA ligase I, ATP-dependent Dnl1 [Desulfurococcus mucosus DSM 2162]
Length = 610
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 191/561 (34%), Positives = 301/561 (53%), Gaps = 55/561 (9%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+P L+ VF+ I T R +T ++ + + +T PE + VVYL ++ P +GL
Sbjct: 8 MPVGLLADVFERIEAITSRTQMTALLVGLFK---QTPPEIIDRVVYLIQGRLWPDWKGLP 64
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLG-----LVAKASRSSQ-----SMMRK 299
E+G+G+ ++KA+A A G TE+ V+ + +GDLG L +K++ SQ S ++
Sbjct: 65 EIGVGEKLLVKAIALATGVTEASVEGLSKSLGDLGKAAEQLKSKSTGRSQGVTLLSYTQQ 124
Query: 300 PDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLA 359
LT+ +V++T +A G+ S++ K + LL A+ E ++++R ++ +LR+G+
Sbjct: 125 RTELTVNRVYETLVRVAMAQGEGSKDIKIRLLAGLLKEASPKEAKFIVRFVEGRLRVGIG 184
Query: 360 EQTLLAALGQAAVYNEQHSKPPP-----NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
E T++ AL A +Y + P N+++ L E AKI+ L +++ P +
Sbjct: 185 EATIMDAL--ATIYGGGVAARPLIERAYNLRADLGEVAKILAS--KGLEAVKEVRPEV-- 238
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
G PI PMLA+ EI+ K F EYKYDGERAQIH D
Sbjct: 239 --------------GTPIRPMLAERLSDPGEILEKVGGDAF-IEYKYDGERAQIHKKGD- 282
Query: 475 SVEIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
V I+SR E T ++PDVV LA + LK +++ EIVAYD E ++ PFQ L R
Sbjct: 283 KVWIFSRRLENITQQYPDVVELARNHLKADEA---IVEGEIVAYDPETGELKPFQELMHR 339
Query: 534 ARKNVSLSDIK-VDVCIYAFDILYRNGQPLLQEQLRVRR---EHLYDSFEEEPGFFQFAT 589
RK+ S IK V ++ FD+LY NG E L VRR E + D EE F A
Sbjct: 340 KRKHDIHSAIKEYPVKVFLFDLLYLNGHDYTVETLPVRRSKLEEVVDKVEE----FTIAE 395
Query: 590 TLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSL 649
+ + +DE++KF A+ EG+++K + D+ Y+ R W+K K+DY + D++
Sbjct: 396 YIRTNKVDELEKFFLKAISEGAEGVMVKALHGDSIYQAGTRGWLWIKFKRDYRSEMVDTV 455
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
DLV + AFHG+G+R G YGA L+A Y+ + F+++CK+G+GF + L++ L+ +
Sbjct: 456 DLVVVGAFHGKGRRGGKYGALLMAAYNDEKDVFETVCKVGSGFKDEDLDKLPEILKPYMR 515
Query: 710 PKPRPYYRFADTISPDVWFEP 730
+ P R + PDVW EP
Sbjct: 516 DRRHP--RVVANMEPDVWVEP 534
>gi|374632962|ref|ZP_09705329.1| ATP-dependent DNA ligase I [Metallosphaera yellowstonensis MK1]
gi|373524446|gb|EHP69323.1| ATP-dependent DNA ligase I [Metallosphaera yellowstonensis MK1]
Length = 599
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/562 (30%), Positives = 297/562 (52%), Gaps = 36/562 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++ +T P + VVYL ++ P G+ EL
Sbjct: 3 FKLIAEYFDRLEKISSRLQLTSLLSDLFH---KTDPSLMDKVVYLIQGRLWPDFTGMPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA---KASRSSQSMM------RKPDP 302
G+G+ +IKA++ A G E V+K Y+ +GDLG VA K+S + S++ +
Sbjct: 60 GLGEKFLIKAISMASGVKEEEVEKTYKSVGDLGEVAMRLKSSSKTSSILTFLGGSQTFGS 119
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
L + +V++ IA+ +G+ S++ K LL A+ E +YL+R ++ +LR+G+ + T
Sbjct: 120 LDVLEVYNELVKIAESSGEGSRDIKIRIFAGLLKKASPLEAKYLVRFVEGRLRLGIGDAT 179
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL A + P IV++ +++ +I + +G+ L +
Sbjct: 180 VLDAL--ALTFGGSSDYRP------------IVERAYNLRADLGEIARVIAKEGIEKLKS 225
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
TPGIPI PMLA+ +EI++K +YKYDGERAQIH +D V I+SR
Sbjct: 226 VIP-TPGIPIRPMLAERLSDPAEILDKVGGKAL-VDYKYDGERAQIHRNKD-KVFIFSRR 282
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
E T ++ DVV V+R K F+++ EIV D E ++ PFQ L R RKN
Sbjct: 283 MENITDQYVDVVEYVTRYLKGD--DFIVEGEIVPVDPESGEMRPFQELMHRRRKNDIHEA 340
Query: 543 IK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
I+ V +Y FD++Y G+ E L RR+ L + E + A + + +D++ +
Sbjct: 341 IREYPVNLYLFDLIYYGGKDYTVEPLPARRQKLEEIIAENDKV-KIAEHMLTDSVDKLTE 399
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
+ A+ EG+++K++ ++ Y+ R W+KLKKDY + D++DLV + AF+G+G
Sbjct: 400 YFHQAISEGAEGVMVKSVGPNSVYQAGSRGWLWIKLKKDYQSEMADTVDLVIVGAFYGKG 459
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT 721
KR G + + L+A Y+ + + F+++CK+ +GFS+ L+E S + + + + R
Sbjct: 460 KRGGKFSSLLMAAYNPDKDVFETVCKVASGFSDQELDEMQSKISE--LKRSERHPRVVSE 517
Query: 722 ISPDVWFEPTERPETSNSPASI 743
+ PDVW P E + +I
Sbjct: 518 MVPDVWVTPALVAEIIGAEITI 539
>gi|432328175|ref|YP_007246319.1| ATP-dependent DNA ligase I [Aciduliprofundum sp. MAR08-339]
gi|432134884|gb|AGB04153.1| ATP-dependent DNA ligase I [Aciduliprofundum sp. MAR08-339]
Length = 589
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 277/547 (50%), Gaps = 33/547 (6%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+ + ++ ++ + T R+ +TD + + ++ T PE + V+YL K+ + G+E
Sbjct: 1 MEYRLIAETYEKVEGTTKRLEMTDYLVQLFQS---TPPEIIDRVIYLTQGKLYADYLGVE 57
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-----KASRSSQSMMRKPDPLTI 305
LG+ + IKA++++ G E+ +K + GDLG+VA K +++ + LT+
Sbjct: 58 LGLAEKLAIKAISKSTGIRENAMKDMLRRYGDLGIVAEEAIKKKRQTTLFSFEEEKKLTV 117
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
KV++ F IA+ G+ SQ++K + LL A+ E +Y++R ++ KLR+G+A+ T+L
Sbjct: 118 EKVYENFEKIARAEGEGSQDRKIQLLAELLNLASPLEARYIVRTVEGKLRLGIADMTILD 177
Query: 366 ALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCS 425
AL A +E V++ +++ P I L +G+ +
Sbjct: 178 ALSIAF--------------GGSKELRSFVERAYNIHPDLGFIAKKLAVEGIEGVKG-IK 222
Query: 426 FTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAER 485
GIPI MLA+ + EI+ K EYKYDG R Q H + +YSR E
Sbjct: 223 IQLGIPIRAMLAERLPSLEEILAKMGGRA-AFEYKYDGMRIQGHV--GKKIWLYSRRLEN 279
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV 545
T +FPDVV A+ K + D E V D ++LPFQ +S R + +
Sbjct: 280 LTSQFPDVVEALKEAFKGE--EGIFDGEAVPVDINTGELLPFQVVSHRRGRKYGIEKAME 337
Query: 546 D--VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFL 603
D V ++ FD+LY +G+ L Q+ RR+ L + + +FA + S D+ EI+ F
Sbjct: 338 DYPVVLFLFDVLYLDGEDLTQKPYPERRKIL-ERVIQPTDRVKFAHRIVSSDISEIKDFF 396
Query: 604 DAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
+ A++ CEGL+ K + ++ Y R W+K KKDY +GD++DLV + AF G+G+R
Sbjct: 397 NHAIEDGCEGLVAKNVGEESIYRAGAREFLWIKYKKDYKVEMGDTVDLVVVGAFAGKGRR 456
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTIS 723
G YGA L+A Y+ + F+++CK+G+GF++ L I K P R +
Sbjct: 457 KGTYGALLMAAYNPEKDRFETVCKLGSGFTDEQLAHLPKKFEELKIEKRHP--RVWSKMD 514
Query: 724 PDVWFEP 730
D WF P
Sbjct: 515 ADYWFVP 521
>gi|156937733|ref|YP_001435529.1| ATP-dependent DNA ligase [Ignicoccus hospitalis KIN4/I]
gi|166215371|sp|A8AB20.1|DNLI_IGNH4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|156566717|gb|ABU82122.1| DNA ligase I, ATP-dependent Dnl1 [Ignicoccus hospitalis KIN4/I]
Length = 594
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 294/578 (50%), Gaps = 36/578 (6%)
Query: 200 FDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-ELGIGDASI 258
+ + T R I I+ N+ + V+E + + VVY K+ P G E+GIG+ I
Sbjct: 10 LERLERTTSRTQIVAILTNLFKKVIEENKDIIDKVVYFIQGKLWPDWYGYPEIGIGEKGI 69
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVA-----KASRSSQSM-MRKPDPLTITKVFDTF 312
IKA++ A E V+ Y+++GDLGLVA KA + M ++K + LT KV++T
Sbjct: 70 IKAISLAANVKEKEVEGLYKQLGDLGLVAERLMAKAPKGGLMMFVKKKEELTFEKVYETL 129
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
+ IA G+ S++ K + LL A+ E +Y++R +Q KLR+G+ + +++ AL A
Sbjct: 130 KRIAFMQGEGSRDLKIKTLAGLLKEASPKEAKYIVRFVQGKLRLGVGDASIIEALAHVAG 189
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
+ + N+++ L AKI +T+G L PG+P+
Sbjct: 190 TTKDVVERAYNLRADLGAVAKIA-----------------VTEGPEALKRVRP-KPGVPV 231
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
PMLA+ EI+ K EYKYDGERAQIH L DG V I+SR E T +PD
Sbjct: 232 RPMLAERLNDPKEILKKLGGKGL-AEYKYDGERAQIHLLPDGKVVIFSRRLENITRSYPD 290
Query: 493 VV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIY 550
VV A S LK + +++ EI+A + E + PFQ L R RK +V+L+ ++ V +
Sbjct: 291 VVQYAKSGLK---AKEAIVEGEIIAVNPETGEPRPFQELMRRRRKHDVALAMSEIPVNVK 347
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
FDI+Y +G+ + + L +RR+ L + EE F L S +E+++F ++
Sbjct: 348 LFDIIYVDGEDMTNKPLPLRRKRLEEVVEESEEFSLSTAKLVSTP-EELEQFFHQSISEG 406
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
EGL++K + + Y+ R W+K KKDY + + +DLV + AF+GRG+R G +GA
Sbjct: 407 HEGLVVKAVHDKSVYQAGARGWLWIKYKKDYKSEMVEPVDLVVVGAFYGRGRRGGTFGAL 466
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
L+A YD + F ++CK+G+GFS+ L R L I + +P R + PDVW P
Sbjct: 467 LVAGYDEKRDAFATVCKVGSGFSDEEL-ARLPELLKPYISETKP-PRVISNVKPDVWVRP 524
Query: 731 TERPETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
E A I TC S RF R
Sbjct: 525 ALVAEIIG--AEITLSPIHTCAKDEVSAGSGLAIRFPR 560
>gi|389860326|ref|YP_006362565.1| ATP-dependent DNA ligase [Thermogladius cellulolyticus 1633]
gi|388525229|gb|AFK50427.1| ATP-dependent DNA ligase [Thermogladius cellulolyticus 1633]
Length = 600
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 288/533 (54%), Gaps = 44/533 (8%)
Query: 216 VCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGL-ELGIGDASIIKALAEACGRTESHV 273
+ N+L +++ TP +++ VVY+ ++ P +GL ELG+ + SII+A+A A G+++ V
Sbjct: 18 MVNILVALLKKTPAEIIDRVVYIIEERLWPDWKGLPELGVAEKSIIRAIAVATGQSDDVV 77
Query: 274 KKQYQEMGDLGLVA-----------KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKD 322
++ + +GDLG A K + S S + LT+++V+DTF IA G+
Sbjct: 78 ERTAKTLGDLGKAAESLISTVREKQKRTTSLLSFVTSRRELTVSRVYDTFVRIAMAQGEG 137
Query: 323 SQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKP-- 380
S++ K + LL A+ E +Y++R + KLR+G+ E TL+ AL A ++P
Sbjct: 138 SKDIKIRLLSGLLAEASPKEARYIVRFAEGKLRLGVGEATLMDALA-VAFGGGSFARPII 196
Query: 381 --PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAK 438
N+++ L E A++V T G+ L GIPI PMLA+
Sbjct: 197 ERAYNLRADLGEVARVVA-----------------TKGIEEL-KALKPVVGIPIRPMLAE 238
Query: 439 PTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVS 498
EI+ K + F EYKYDGERAQIH D V I+SR E T ++PDVV V
Sbjct: 239 RHNNPKEILEKVGGVGF-VEYKYDGERAQIHKKGD-EVVIFSRRLENITHQYPDVVDYVK 296
Query: 499 RLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK-VDVCIYAFDILYR 557
R K +++ EIVA D + + PFQ L R RK+ +S +K + V +Y FD+LY
Sbjct: 297 RGVKAE--EAIVEGEIVAIDPDTGEFKPFQELMHRKRKHDVMSVVKEIPVRVYLFDLLYL 354
Query: 558 NGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIK 617
NG + L RR+ L + E+ G A +T+ + E++KF A+ EG+++K
Sbjct: 355 NGVDYTVKPLPERRKALEEVIEKNEGL-DIAEYITAKNPVELEKFFMGAISDGAEGVMVK 413
Query: 618 TMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDS 677
+ +D+ Y+ R W+K K+DY + D++DLV + AF+GRG+R G +GA L+A Y+
Sbjct: 414 AIHKDSIYQAGTRGWLWIKFKRDYRSEMIDTVDLVVVGAFYGRGRRGGKFGALLMAAYNE 473
Query: 678 NNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
+ F+++CK+G+GF++ L + L+ ++ K +P R I PDVW P
Sbjct: 474 EKDVFETVCKVGSGFTDEDLNQLPDLLKPYIVDK-KP-ARVVSNIQPDVWVVP 524
>gi|257076027|ref|ZP_05570388.1| ATP-dependent DNA ligase [Ferroplasma acidarmanus fer1]
Length = 595
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 163/520 (31%), Positives = 273/520 (52%), Gaps = 30/520 (5%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKK 275
+ ++L +++E +DL +VYL K+AP +EG+E G+ I+K+LA G E V K
Sbjct: 35 LTSILGSLLENAGDDLKELVYLIQGKLAPDYEGIEFGVSGKLIVKSLAAISGMDEEEVNK 94
Query: 276 QYQEMGDLGLVAKASRSSQSMMRKP---DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
+ + GDLG+ A R + M +KP + LT+ V+ +AK AG S + K +
Sbjct: 95 LFYKNGDLGITASEIR--EKMEQKPLFREDLTVHYVYTRLMELAKSAGHGSVKGKTDIYA 152
Query: 333 ALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAA 392
L+V + + +Y+ R++ KLR+G+A+ T+L +L A + A
Sbjct: 153 DLMVNSYPEDIKYITRIIMGKLRLGVADSTILDSLVHAFSSKDN---------------A 197
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
+V+ ++ P I L + +SN P IP MLA+ + + +I K +
Sbjct: 198 DMVETAYNFHPDIGLIATLLQKGDIKAISNIGP-EPLIPFKVMLAERLRSIDDIREKM-N 255
Query: 453 MEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDC 512
+ EYKYDG R ++H D ++I+SR E T FPD++ K S S ++D
Sbjct: 256 HHVSFEYKYDGLRTELHKKGD-KIKIFSRGLEETTENFPDIIENFK--KSYSFESIIIDG 312
Query: 513 EIVAYDREKQKILPFQTLSTRARKNVSLSD--IKVDVCIYAFDILYRNGQPLLQEQLRVR 570
E V ++ + ++ PFQ +S R + +++ ++ + ++ FDIL NG+ L+ R
Sbjct: 313 ESVPFNPDTGELFPFQMVSKRRGRKYQITEKSTEIPLVMFIFDILELNGRTLVNLPYEER 372
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKR 630
R+ L ++F + F+ AT L+S D +EI KF + +++ CEG++ K ++ Y R
Sbjct: 373 RKILEENFVDNE-HFRLATRLSSDDSEEINKFFEQSIEDGCEGIVAKDTSDESVYRAGAR 431
Query: 631 SLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGT 690
W+K K+DY + + DS+DLV I AF+GRG+R G YGA L+A Y+ F+S+ K+GT
Sbjct: 432 GWLWIKFKRDYQKELADSMDLVIIGAFNGRGRRAGAYGALLMASYNEETHAFESVTKLGT 491
Query: 691 GFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
GFS+ +L L S ++ +P + PD+W P
Sbjct: 492 GFSDEVLFSLPKML-SDLVRDHKP-AMVESKMVPDIWIYP 529
>gi|84617165|emb|CAH64534.1| DNA ligase (ATP) [Ferroplasma acidiphilum]
Length = 595
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 163/520 (31%), Positives = 273/520 (52%), Gaps = 30/520 (5%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKK 275
+ ++L +++E +DL +VYL K+AP +EG+E G+ I+K+LA G E V K
Sbjct: 35 LTSILGSLLENAGDDLKELVYLIQGKLAPDYEGIEFGVSGKLIVKSLAAISGMDEEEVNK 94
Query: 276 QYQEMGDLGLVAKASRSSQSMMRKP---DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
+ + GDLG+ A R + M +KP + LT+ V+ +AK AG S + K +
Sbjct: 95 LFYKNGDLGITASEIR--EKMEQKPLFREDLTVHYVYTRLMELAKSAGHGSVKGKTDIYA 152
Query: 333 ALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAA 392
L+V + + +Y+ R++ KLR+G+A+ T+L +L A + A
Sbjct: 153 DLMVNSYPEDIKYITRIIMGKLRLGVADSTILDSLVHAFFSKDN---------------A 197
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
+V+ ++ P I L + +SN P IP MLA+ + + +I K +
Sbjct: 198 DMVETAYNFHPDIGLIATLLQKGDIKAISNIGP-EPLIPFKVMLAERLRSIDDIREKM-N 255
Query: 453 MEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDC 512
+ EYKYDG R ++H D ++I+SR E T FPD++ K S S ++D
Sbjct: 256 HHVSFEYKYDGLRTELHKKGD-KIKIFSRGLEETTENFPDIIENFK--KSYSFESIIIDG 312
Query: 513 EIVAYDREKQKILPFQTLSTRARKNVSLSD--IKVDVCIYAFDILYRNGQPLLQEQLRVR 570
E V ++ + ++ PFQ +S R + +++ ++ + ++ FDIL NG+ L+ R
Sbjct: 313 ESVPFNPDTGELFPFQMVSKRRGRKYQITEKSTEIPLVMFIFDILELNGRILVNLPYEER 372
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKR 630
R+ L ++F + F+ AT L+S D +EI KF + +++ CEG++ K ++ Y R
Sbjct: 373 RKILEENFVDNE-HFRLATRLSSDDSEEINKFFEQSIEDGCEGIVAKDTSDESVYRAGAR 431
Query: 631 SLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGT 690
W+K K+DY + + DS+DLV I AF+GRG+R G YGA L+A Y+ F+S+ K+GT
Sbjct: 432 GWLWIKFKRDYQKELADSMDLVIIGAFNGRGRRAGAYGALLMASYNEETHAFESVTKLGT 491
Query: 691 GFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
GFS+ +L L S ++ +P + PD+W P
Sbjct: 492 GFSDEVLFSLPKML-SDLVRDHKP-AMVESKMVPDIWIYP 529
>gi|20089613|ref|NP_615688.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
gi|74533835|sp|Q8TSR7.1|DNLI1_METAC RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|19914533|gb|AAM04168.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
Length = 580
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 267/522 (51%), Gaps = 45/522 (8%)
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL I PA E LGI D + +A+A A G +E VKK+Y GDLG VA +
Sbjct: 44 YLFLGSIGPAFENTTLGIKDRLVTRAIAGAYGVSEEEVKKRYARAGDLGDVA-----FEL 98
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
++ LTI +VF R I + +GK SQEKK + +L AT E +Y+IR++ +LR
Sbjct: 99 SKKREASLTIEEVFKRLRQIKEASGKGSQEKKTGLLSDILQKATPEEGKYIIRIVLGRLR 158
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTD 415
+G +Q LL A A +++H A KI K+ +SV ++ L
Sbjct: 159 LGFGDQFLLEAFSIAFTGDKKH-------------AGKI-KESYSVCTDIGELAQTLAEH 204
Query: 416 GVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS 475
G S PG P+ MLA+ + E+ + + + E KYDGER QIH D
Sbjct: 205 GA-GAPGYFSIKPGRPVKSMLAQRVESFEELEERIKGKK-AAEEKYDGERVQIHKAGD-E 261
Query: 476 VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY---DREKQKI---LPFQT 529
++ +SR E T ++PD++ AV + S + VLD EIVAY ++E +I PFQ
Sbjct: 262 IKAFSRRLEDITAQYPDIIEAVR--ESISADTIVLDGEIVAYAELEKENTRIEEFYPFQN 319
Query: 530 LSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR----EHLYDSFEEEPGF 584
L R RK V K V ++ FDILY NG+ LL++ RR EH+ S G
Sbjct: 320 LMQRRRKYEVEKYREKCPVAVFFFDILYLNGESLLKKTYPERRALLEEHVNGS-----GI 374
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
+ +++E++ F + V+ EG++ K+M ++ YE KRS WLK K++Y E
Sbjct: 375 VHLTRRTVTENIEELEDFFNETVEKGLEGIVAKSMSSNSVYEAGKRSWLWLKWKQEYSEG 434
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ ++ DLV + +++G+GKR G +GA L A + ++F++ K+GTGF+EA EE +S L
Sbjct: 435 MRETFDLVVVGSYYGKGKRKGSFGALLCAVLNEEEQQFETFTKVGTGFTEADAEEINSLL 494
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTE-----RPETSNSPA 741
+ + + + PD++ EP E +NSP
Sbjct: 495 SAHTVSEAPKNVIIKKGMLPDIFIEPAVVIEVLGSEITNSPG 536
>gi|254166594|ref|ZP_04873448.1| DNA ligase I, ATP-dependent superfamily [Aciduliprofundum boonei
T469]
gi|289596489|ref|YP_003483185.1| DNA ligase I, ATP-dependent Dnl1 [Aciduliprofundum boonei T469]
gi|197624204|gb|EDY36765.1| DNA ligase I, ATP-dependent superfamily [Aciduliprofundum boonei
T469]
gi|289534276|gb|ADD08623.1| DNA ligase I, ATP-dependent Dnl1 [Aciduliprofundum boonei T469]
Length = 590
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 168/551 (30%), Positives = 280/551 (50%), Gaps = 40/551 (7%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV-PVVYLAANKIAPAHEGL 249
+ + ++ + I + T R+ +TD + + TPED++ V+YL K+ P + G+
Sbjct: 1 MEYKIIAETYSKIESTTKRLEMTDYLVELFHN----TPEDVIDKVIYLTQGKLYPDYMGI 56
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-----KASRSSQSMMRKPDPLT 304
ELG+ + ++ + +A G E + + ++ GDLG VA K +++ + LT
Sbjct: 57 ELGLAEKLAMRGITKATGIKEKTLGEMLKKYGDLGSVAEEAIKKKRQTTLFSFEEEKNLT 116
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ KV++ F IAK G SQ++K + LL A E +Y++R ++ KLR+G+A+ T+L
Sbjct: 117 VEKVYENFEKIAKAEGPGSQDRKIQLLAELLNLAKPIEAKYIVRTVEGKLRLGIADMTIL 176
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
AL A +E +V++ +++ P I L +G+ + +
Sbjct: 177 DALSIA--------------YGRTKELRSLVERTYNIHPDLGYIAKKLAKEGIDGVKD-I 221
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
GIPI MLA+ + EI+ K + EYKYDG R Q H +D V +YSR E
Sbjct: 222 KIELGIPIRAMLAERLPSLEEILAKMGG-KAAFEYKYDGMRIQGHVGKD-KVWLYSRRLE 279
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
T +FPDVV A+ + + + D E V D ++LPFQ +S R + +
Sbjct: 280 NLTSQFPDVVEALKEAFQG--KEGIFDGEAVPVDIHTGELLPFQVVSHRRGRKYEIEKAI 337
Query: 545 VD--VCIYAFDILYRNGQPLLQEQLRVRR---EHLYDSFEEEPGFFQFATTLTSIDLDEI 599
D V ++ FDI+Y +G+ L + RR E + + E +FA + S D+ EI
Sbjct: 338 EDYPVVLFLFDIIYLDGEDLTSKPYPERRKILERVINPTER----VKFAHRIVSSDIGEI 393
Query: 600 QKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
++F + A++ CEGL+ K++ +++ Y R W+K K+DY +GD++DLV + AF G
Sbjct: 394 REFFNKAIEDGCEGLVAKSIGKESIYRAGAREFLWIKYKRDYKVEMGDTVDLVVVGAFAG 453
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFA 719
+GKR G YGA L+A Y+ + F+++CK+G+GF++ L I P R
Sbjct: 454 KGKRKGTYGALLMAAYNPEKDRFETVCKLGSGFTDEQLAYLPRKFEDLKIENKHP--RVW 511
Query: 720 DTISPDVWFEP 730
+ D WF P
Sbjct: 512 SEMEADYWFVP 522
>gi|119389897|pdb|2HIV|A Chain A, Atp-Dependent Dna Ligase From S. Solfataricus
gi|119389898|pdb|2HIX|A Chain A, Atp Dependent Dna Ligase From S. Solfataricus Bound To Atp
Length = 621
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 171/567 (30%), Positives = 293/567 (51%), Gaps = 35/567 (6%)
Query: 187 KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAH 246
+G + F ++ FD + + R+ +T ++ ++L +T + VVY+ K+ P
Sbjct: 17 RGSHMEFKVIAEYFDKLEKISSRLQLTALLADLLSKSDKTIID---KVVYIIQGKLWPDF 73
Query: 247 EGL-ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM-------- 297
G ELGIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q
Sbjct: 74 LGYPELGIGEKFLIKAISIATNTDENSVENLYKTIGDLGEVARRLKSKQQSTGILGFLGT 133
Query: 298 RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIG 357
+ LT+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G
Sbjct: 134 TSKESLTVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVG 193
Query: 358 LAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGV 417
+ + T+L A+ A + S A++I+++ +++ I ++ G+
Sbjct: 194 IGDATVLDAM--AIAFGGGQS------------ASEIIERAYNLRADLGNIAKIIVEKGI 239
Query: 418 WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE 477
L T GIPI PMLA+ EI+ K +YKYDGERAQIH ED +
Sbjct: 240 EAL-KTLKPQVGIPIRPMLAERLSNPEEILKKMGG-NAIVDYKYDGERAQIHKKED-KIF 296
Query: 478 IYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
I+SR E T ++PDVV VS+ + + F+++ EIVA D E ++ PFQ L R RK+
Sbjct: 297 IFSRRLENITSQYPDVVDYVSKYIEG--KEFIIEGEIVAIDPESGEMRPFQELMHRKRKS 354
Query: 538 VSLSDIK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
IK V ++ FD++Y + L RR+ L +S + + + A + + ++
Sbjct: 355 DIYEAIKEYPVNVFLFDLMYYEDVDYTTKPLEARRK-LLESIVKPNDYVKIAHHIQANNV 413
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAA 656
++++ F A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV +
Sbjct: 414 EDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGG 473
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYY 716
F+G+GKR G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + +
Sbjct: 474 FYGKGKRGGKISSLLMAAYNPKTDSFESVCKVASGFSDEQLDELQKKLME--IKRDVKHP 531
Query: 717 RFADTISPDVWFEPTERPETSNSPASI 743
R + PD+W EP E S +I
Sbjct: 532 RVNSKMEPDIWVEPVYVAEIIGSEITI 558
>gi|254168973|ref|ZP_04875812.1| DNA ligase I, ATP-dependent superfamily [Aciduliprofundum boonei
T469]
gi|197622079|gb|EDY34655.1| DNA ligase I, ATP-dependent superfamily [Aciduliprofundum boonei
T469]
Length = 590
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 278/548 (50%), Gaps = 34/548 (6%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV-PVVYLAANKIAPAHEGL 249
+ + ++ + I + T R+ +TD + + TPED++ V+YL K+ P + G+
Sbjct: 1 MEYKIIAETYSKIESTTKRLEMTDYLVELFHN----TPEDVIDKVIYLTQGKLYPDYMGI 56
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-----KASRSSQSMMRKPDPLT 304
ELG+ + ++ + +A G E + + ++ GDLG VA K +++ + LT
Sbjct: 57 ELGLAEKLAMRGITKATGIKEKILGEMLKKYGDLGSVAEEAIKKKRQTTLFSFEEEKNLT 116
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ KV++ F IAK G SQ++K + LL A E +Y++R ++ KLR+G+A+ T+L
Sbjct: 117 VEKVYENFEKIAKAEGPGSQDRKIQLLAELLNLAKPIEAKYIVRTVEGKLRLGIADMTIL 176
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
AL A +E +V++ +++ P I L +G+ + +
Sbjct: 177 DALSIA--------------YGGTKELRSLVERAYNIHPDLGYIAKKLAKEGIDGVKD-I 221
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
GIPI MLA+ + EI+ K + EYKYDG R Q H +D V +YSR E
Sbjct: 222 KIELGIPIRAMLAERLPSLEEILAKMGG-KAAFEYKYDGMRIQGHVGKD-KVWLYSRRLE 279
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
T +FPDVV A+ + + + D E V D ++LPFQ +S R + +
Sbjct: 280 NLTSQFPDVVEALKEAFQG--KEGIFDGEAVPVDIHTGELLPFQVVSHRRGRKYEIEKAI 337
Query: 545 VD--VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
D V ++ FD++Y +G+ L + RRE L + +FA + S D+ EI++F
Sbjct: 338 EDYPVVLFLFDVIYLDGEDLTSKPYPERREIL-ERVINPTERVKFAHRIVSSDIGEIREF 396
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
+ A++ CEGL+ K++ ++ Y R W+K K+DY +GD++DLV + AF G+GK
Sbjct: 397 FNKAIEDGCEGLVAKSIGEESIYRAGAREFLWIKYKRDYKVEMGDTVDLVVVGAFAGKGK 456
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G YGA L+A Y+ + F+++CK+G+GF++ L I P R +
Sbjct: 457 RKGTYGALLMAAYNPEKDRFETVCKLGSGFTDEQLAYLPRKFEDLKIENKHP--RVWSEM 514
Query: 723 SPDVWFEP 730
D WF P
Sbjct: 515 DADYWFVP 522
>gi|146302935|ref|YP_001190251.1| ATP-dependent DNA ligase [Metallosphaera sedula DSM 5348]
gi|172046897|sp|A4YD25.1|DNLI_METS5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|145701185|gb|ABP94327.1| DNA ligase I, ATP-dependent Dnl1 [Metallosphaera sedula DSM 5348]
Length = 598
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 171/562 (30%), Positives = 289/562 (51%), Gaps = 36/562 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + RI +T ++ ++ + T E + VVYL ++ P G+ E+
Sbjct: 3 FKLIAEYFDRLEKISSRIQLTSLLSDLFKN---TEREVIDKVVYLIQGRLWPDFTGMPEI 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM---------RKPDP 302
G+G+ +IKA+A A G E V+K Y+ +GDLG VA + RS + ++
Sbjct: 60 GMGEKFLIKAIAMAYGNKEEEVEKLYKNIGDLGEVAYSLRSKVKGVSILSFVGGNQEAGE 119
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
L + +V++ IA G+ S++ K L+ AT E +YL+R ++ +LR+G+ + T
Sbjct: 120 LDVMEVYNELVKIATSTGEGSRDIKIRIFAGLIKKATPIEAKYLVRFVEGRLRLGIGDAT 179
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL A + P IV++ +++ I + T+G+ L N
Sbjct: 180 VLDAL--AITFGGSADYRP------------IVERAYNLRADLGDIARVIATEGIEKLKN 225
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
S TPGIPI PMLA+ EI+ K +YKYDGERAQIH D V I+SR
Sbjct: 226 -ISPTPGIPIRPMLAERLPDPEEIMEKMNGKAL-VDYKYDGERAQIHRKGD-KVTIFSRR 282
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
E T ++ DV V + K +F+++ EIV D E ++ PFQ L R RKN
Sbjct: 283 MENITDQYIDVTEYVKQFVKGD--NFIVEGEIVPVDPESGEMRPFQELMHRRRKNNIAEA 340
Query: 543 IK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
IK V ++ FD+++ G+ + L RR L + A+ + + +D++++
Sbjct: 341 IKEYPVNLFLFDLMFFEGEDYTTKPLPERRAKLEEILASNDKV-HIASHIIADRVDKLRE 399
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
+ A+ EG+++K++ D+ Y+ R W+KLK+DY + D++DLV + AF+G+G
Sbjct: 400 YFYQAISEGAEGVMVKSIGPDSIYQAGSRGWLWIKLKRDYQSEMADTVDLVVVGAFYGKG 459
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT 721
KR G + + L+A Y+ + F+++CK+ +GFS+ L+E + + + + + R
Sbjct: 460 KRGGKFSSLLMAAYNPEKDVFETVCKVASGFSDQELDEMQKKINE--LKREQKHPRVVSD 517
Query: 722 ISPDVWFEPTERPETSNSPASI 743
+ PDVW PT E + +I
Sbjct: 518 MIPDVWVSPTLVAEVIGAEITI 539
>gi|347524512|ref|YP_004782082.1| DNA ligase I, ATP-dependent Dnl1 [Pyrolobus fumarii 1A]
gi|343461394|gb|AEM39830.1| DNA ligase I, ATP-dependent Dnl1 [Pyrolobus fumarii 1A]
Length = 609
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 191/599 (31%), Positives = 308/599 (51%), Gaps = 53/599 (8%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+PF L+ F+ + T R T +V ++ +T PE + VVY K+ P +GL
Sbjct: 3 MPFSILAETFEKLERTTSR---TQMVLYLVDLFKKTPPETIDKVVYFLQGKLWPDWKGLP 59
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGL-VAKASRSSQ---------SMMRK 299
ELG+G+ ++IKA++ A E V++ + +GDLGL V + R + + M++
Sbjct: 60 ELGVGEKTLIKAVSIALHVPERTVEELAKRLGDLGLAVERLKREKEKGAKAVGLLAFMKQ 119
Query: 300 PD----PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
P LT+ KV+DT +A G+ S+E K + L+ A+ E +Y++R ++ +LR
Sbjct: 120 PSSGESTLTVEKVYDTLARVALTTGEGSRELKLKLVAGLIAEASPREAKYIVRFIEGRLR 179
Query: 356 IGLAEQTLLAAL-----GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVP 410
+G+ + T++ AL G AA+ + + N+++ L AKI
Sbjct: 180 LGVGDATIIEALSIVYAGSAAM--KHVVERAYNLRADLGLVAKI---------------- 221
Query: 411 ALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY 470
L T GV + N GIPI PMLA+ EI+ K EYKYDGERAQIH
Sbjct: 222 -LATQGVEAVKNIKPEV-GIPIRPMLAERLNNPVEILKKLGGRAL-VEYKYDGERAQIHK 278
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
D + I+SR E T +PDVV LK +++ EIVA D + ++ PFQ L
Sbjct: 279 KGD-KIWIFSRRLENITKMYPDVVEMA--LKGIKANEAIVEGEIVAIDPDTGELRPFQEL 335
Query: 531 STRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT 589
R RK ++ ++ +V V +Y FDILYR+G+ L + L RR+HL + + + + A
Sbjct: 336 MRRKRKHDIHIAMKEVPVAVYLFDILYRDGEDLTVKPLPERRKHLEEVLVQSDTW-RLAE 394
Query: 590 TLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSL 649
+ + +E+++F A++ EG++ K + + Y+ R W+K K+DY + D++
Sbjct: 395 HIYTDKPEELEQFFLRAIEDGAEGVMAKAVHSRSIYQAGARGWLWIKYKRDYKSEMIDTV 454
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
DLV + AF+G+G+R G +GA L+A YD + + F+++CK+G+GF++ LE + L+ +I
Sbjct: 455 DLVVVGAFYGKGRRGGKFGALLMAAYDPDTDTFKTVCKVGSGFTDEDLERLNEMLKPYII 514
Query: 710 PKPRPYYRFADTISPDVWFEPTERPETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
P P R + PDVW +P E A + TC P + RF R
Sbjct: 515 PHKHP--RVDSKMKPDVWVQPALVAEIIG--AELTLSPIHTCCHGWVKPGAGISIRFPR 569
>gi|291231955|ref|XP_002735927.1| PREDICTED: DNA ligase (ATP) 1-like [Saccoglossus kowalevskii]
Length = 857
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 196/311 (63%), Gaps = 14/311 (4%)
Query: 176 EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
++ P ACW++GE+VP++ ++ F+ I T R+ I +I+ N R+V+ +P+DL+ +
Sbjct: 379 KYHPIDDACWKRGEKVPYLAVARTFEAIEEITARLKIVNILGNFFRSVIVLSPDDLLYCL 438
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL NK+APA+EG+ELG+G+ ++K +A+A GR+ +K E GD+GLVA++SRS+Q
Sbjct: 439 YLCLNKLAPAYEGIELGLGETVLMKTIAQATGRSLDKIKIDTAEKGDIGLVAESSRSNQR 498
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
M P LT VF + I+ G S +K ++IK + VA E +YLIR L KLR
Sbjct: 499 TMFAPPKLTAYGVFTKLKDISSMTGNASMSRKIDKIKGMFVACRFSEARYLIRSLTGKLR 558
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLP 403
IGLAEQ++LAALG+A PP I + LEE+ I+K + +P
Sbjct: 559 IGLAEQSVLAALGRAVALTPPGQSFPPEILDAGKGMSAESLKKKLEESVLIIKTTYCEMP 618
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
Y+ I+P LL +G+ L C TPGIP+ PMLA PTKGV+E++++F+D FTCEYKYDG
Sbjct: 619 NYDMIIPTLLKEGIEELPKHCKLTPGIPLKPMLAHPTKGVTEVLSRFEDAAFTCEYKYDG 678
Query: 464 ERAQIH--YLE 472
ERAQ+ YLE
Sbjct: 679 ERAQLKKDYLE 689
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 71/94 (75%)
Query: 636 KLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEA 695
+LKKDY+E +GD+LD+V + +HGRGKRTG YG FLLACYD EEFQ+ICKIGTGF +
Sbjct: 682 QLKKDYLEGVGDTLDVVVLGGYHGRGKRTGTYGGFLLACYDDETEEFQTICKIGTGFKDE 741
Query: 696 MLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
LE+ S+ + +I KP+ YYR+ ++ P+ WF+
Sbjct: 742 ELEQHSTFFKDHIIEKPKAYYRWDSSVEPNHWFD 775
>gi|225851429|ref|YP_002731663.1| ATP-dependent DNA ligase [Persephonella marina EX-H1]
gi|254778144|sp|C0QSL7.1|DNLI_PERMH RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|225645043|gb|ACO03229.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP])(Lig(Tk))
[Persephonella marina EX-H1]
Length = 582
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 279/540 (51%), Gaps = 36/540 (6%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ ++ ++ T RI +T + ++ + ET PE + VVYL+ +IAP + GL+ +
Sbjct: 6 LAQLYQILEETTSRIKMTQALVDLFK---ETPPELIDKVVYLSIGRIAPEYTGLDYNFSE 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP-LTITKVFDTFRL 314
S IKAL+ +E ++ Q + GDLG K + + KP+ LT+ +V+ T R
Sbjct: 63 KSAIKALSTVLNISEHDIQHQVLQTGDLGDAGKKLYEEKGV--KPEGILTVEEVYRTLRE 120
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV-- 372
IA+ G S +KK LL A+ E +YL+R + +LR+G+ + T++ AL A
Sbjct: 121 IAQTTGYGSTKKKLQLFTELLKKASPLEVKYLLRTITERLRLGIGDNTIMDALSIAFTGK 180
Query: 373 -YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIP 431
N + + NI S L A+I+ EK + D V N+ G P
Sbjct: 181 KENREIIERAYNISSDLGYVARILA---------EKGL-----DAVKNIK----IEIGRP 222
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFP 491
I PMLA+ S I+ K + EYKYDGER Q+H D + ++SR E T +FP
Sbjct: 223 IRPMLAERMAIPSYILKKLGG-KAGAEYKYDGERIQVHRKGD-TFYLFSRRLENITDQFP 280
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD-VCIY 550
D++ LK+ +++ E V D I PFQ L R K V+ I + + +
Sbjct: 281 DLI---EFLKESIPEECIIELEAVVIDPSSGAIRPFQDLMNRRVKYVTRFHIMMYPIAGF 337
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
FDI+Y NG+ L + RR+ L ++ + + ++++++ F A++
Sbjct: 338 IFDIMYLNGEDLTLKPYPERRKILEENIKITERI-NLSERKIVDNVEDLESFFHQAIEDG 396
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
CEGL+ K++ +D+ Y+ KR W+K K+DY + D+LDLV + AF+G+G RTG +G+
Sbjct: 397 CEGLVCKSLQKDSIYQAGKRGFLWIKYKRDYKSHLADTLDLVVVGAFYGKGARTGYFGSL 456
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
L+ACYD ++F+++CK+GTGF E ++ L+ + P R +S D+W+EP
Sbjct: 457 LMACYDPETDQFKTVCKVGTGFKEDDFKKLDDLLKEHTLDHKHP--RVNSILSADIWYEP 514
>gi|15897140|ref|NP_341745.1| ATP-dependent DNA ligase [Sulfolobus solfataricus P2]
gi|284174384|ref|ZP_06388353.1| ATP-dependent DNA ligase [Sulfolobus solfataricus 98/2]
gi|384433651|ref|YP_005643009.1| ATP-dependent DNA ligase I [Sulfolobus solfataricus 98/2]
gi|20137903|sp|Q980T8.1|DNLI_SULSO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|13813323|gb|AAK40535.1| DNA ligase (polydeoxyribonucleotide synthase (ATP)) (lig)
[Sulfolobus solfataricus P2]
gi|261601805|gb|ACX91408.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus solfataricus 98/2]
Length = 601
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 170/561 (30%), Positives = 290/561 (51%), Gaps = 35/561 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++L +T + VVY+ K+ P G EL
Sbjct: 3 FKVIAEYFDKLEKISSRLQLTALLADLLSKSDKTIID---KVVYIIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPDPL 303
GIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q + L
Sbjct: 60 GIGEKFLIKAISIATNTDENSVENLYKTIGDLGEVARRLKSKQQSTGILGFLGTTSKESL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
T+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ + T+
Sbjct: 120 TVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATV 179
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L A+ A + S A++I+++ +++ I ++ G+ L T
Sbjct: 180 LDAM--AIAFGGGQS------------ASEIIERAYNLRADLGNIAKIIVEKGIEAL-KT 224
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
GIPI PMLA+ EI+ K +YKYDGERAQIH ED + I+SR
Sbjct: 225 LKPQVGIPIRPMLAERLSNPEEILKKMGG-NAIVDYKYDGERAQIHKKED-KIFIFSRRL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T ++PDVV VS+ + + F+++ EIVA D E ++ PFQ L R RK+ I
Sbjct: 283 ENITSQYPDVVDYVSKYIEG--KEFIIEGEIVAIDPESGEMRPFQELMHRKRKSDIYEAI 340
Query: 544 K-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
K V ++ FD++Y + L RR+ L +S + + + A + + ++++++ F
Sbjct: 341 KEYPVNVFLFDLMYYEDVDYTTKPLEARRK-LLESIVKPNDYVKIAHHIQANNVEDLKSF 399
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+GK
Sbjct: 400 FYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGK 459
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R +
Sbjct: 460 RGGKISSLLMAAYNPKTDSFESVCKVASGFSDEQLDELQKKLME--IKRDVKHPRVNSKM 517
Query: 723 SPDVWFEPTERPETSNSPASI 743
PD+W EP E S +I
Sbjct: 518 EPDIWVEPVYVAEIIGSEITI 538
>gi|164422739|ref|XP_958945.2| hypothetical protein NCU09706 [Neurospora crassa OR74A]
gi|157069800|gb|EAA29709.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 853
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 244/451 (54%), Gaps = 57/451 (12%)
Query: 176 EFDPKMVACWE-KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
++ P++ W G + L F ++S+ T RI I D + N +R ++E P L+P
Sbjct: 163 KYIPQLQESWATDGGDASYALLIRCFVLVSSTTSRIKIVDTLVNCVRLLIEGDPSSLLPA 222
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
V+LA N I+P +KAL + ++GD G VA ++ Q
Sbjct: 223 VWLATNAISPPS------------LKALND--------------KLGDPGDVAFEAKKKQ 256
Query: 295 SM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE-PQYLIRLLQS 352
S +RKP PLTI VF + I+K G+ S + K+ + LL A E +Y++R L
Sbjct: 257 SFTLRKPKPLTIKGVFQSLVKISKTQGQGSGDAKQRIVDKLLQDARGGEESRYVVRTLCQ 316
Query: 353 KLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPAL 412
L+ ++ L A VY +A +IVK ++ P Y +VP L
Sbjct: 317 HLK----KEEL------AEVY---------------AKAEEIVKASYARHPDYNDLVPVL 351
Query: 413 LTDGV-WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL 471
L GV L C T IP+ PML T+ +SE++++ Q +F CEYKYDG+RAQIH
Sbjct: 352 LETGVSEELLVRCGLTLHIPLRPMLGGITRDLSEMLSRLQGRDFACEYKYDGQRAQIHCD 411
Query: 472 EDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
+ G V I+SR+ E T K+PD+V V +++ V+SF+++ E+VA DR ++ FQTL+
Sbjct: 412 DRGVVSIFSRHLELMTDKYPDLVALVPKIRGEDVQSFIMEGEVVAVDRATGELKNFQTLT 471
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
RARK+V++ I +DVC++AFD++Y NGQPLL R RR+ L F E P F + ++
Sbjct: 472 NRARKDVAIGAITIDVCLFAFDLMYLNGQPLLNRSFRERRDMLRSLFMEIPHHFTWVKSI 531
Query: 592 --TSIDLDEIQKFLDAAVDASCEGLIIKTMD 620
TS + + + +F +AVD+ CEG+++K +D
Sbjct: 532 DATSQESEIVLEFFKSAVDSKCEGIMVKILD 562
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 12/122 (9%)
Query: 623 ATYEPSKRSLNWLKLKKDYI-ESIG-DSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNE 680
ATYEP KR +WLK+KKDYI S G D+LDL+PIAA+HG G++ + LLA +
Sbjct: 637 ATYEPDKRLDSWLKVKKDYIGTSAGVDTLDLIPIAAWHGTGRKAKWWSPILLAVRNEETG 696
Query: 681 EFQSICKIGTGFSEAMLE------ERSSSLRSKVIPK----PRPYYRFADTISPDVWFEP 730
+++CK +GF+++ + ++ S S PK +P + +PDVWFEP
Sbjct: 697 SLEAVCKCMSGFTDSFYKANREVYDKDGSFSSDGEPKNVHVAKPGFVEYAGGNPDVWFEP 756
Query: 731 TE 732
E
Sbjct: 757 QE 758
>gi|330835781|ref|YP_004410509.1| ATP-dependent DNA ligase [Metallosphaera cuprina Ar-4]
gi|329567920|gb|AEB96025.1| ATP-dependent DNA ligase [Metallosphaera cuprina Ar-4]
Length = 598
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 179/592 (30%), Positives = 298/592 (50%), Gaps = 48/592 (8%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + RI +T ++ ++ + + T + VVY+ ++ P G+ E+
Sbjct: 3 FKLIAEYFDKLEKISSRIQLTSLLSDLFKNTDKNT---ISKVVYIIQGRLWPDFAGMPEI 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA----KASRSSQSM-----MRKPDP 302
G+G+ +IK++A A + E ++K Y+ +GDLG VA S+SS +
Sbjct: 60 GMGEKFLIKSIAMAFSKKEEEIEKIYKRIGDLGEVAYTLKNESKSSNILSFINNTTHDSE 119
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
L + +V++ IA +G+ S++ K +L AT E +YL+R ++ +LR+G+ + T
Sbjct: 120 LEVEEVYEDLVKIATSSGEGSRDVKIRTFAGILRKATPLEAKYLVRFVEGRLRLGIGDAT 179
Query: 363 LLAALGQAAVYNEQHSKPPP-----NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGV 417
+L AL A + P N+++ L E AKI+ G+
Sbjct: 180 VLDAL--AITFGGSTEYRPIVERAYNLRADLGEIAKIIDAY-----------------GI 220
Query: 418 WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE 477
L T S TPGIPI PMLA+ +EI+ K +YKYDGERAQIH + +
Sbjct: 221 EKLK-TISPTPGIPIRPMLAERLADPAEIMEKVNGNAL-VDYKYDGERAQIHK-KGEDIY 277
Query: 478 IYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
I+SR E T ++ DVV V + +F+++ EIV D E ++ PFQ L R RKN
Sbjct: 278 IFSRRMENITNQYIDVVDYVKKFINGD--NFIIEGEIVPIDPESGEMRPFQELMHRRRKN 335
Query: 538 VSLSDI-KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
I + V ++ FD++ NGQ L RR L +S +E + A+ + D+
Sbjct: 336 DIYQAINEYPVSLFLFDLMLLNGQDYTTRPLLDRRAAL-ESIIKENDKVRIASHIMVNDV 394
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAA 656
++++++ AV EG++IK++ D+ Y+ R W+KLK+DY + D++DLV + A
Sbjct: 395 NKLKEYFYQAVADGAEGVMIKSVSPDSVYKAGSRGWLWIKLKRDYQSEMADTVDLVVVGA 454
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYY 716
F+G+GKR G + + L+A Y+ + F+++CK+ +GFS+ L+E + + + +
Sbjct: 455 FYGKGKRGGKFSSLLMAAYNPEKDVFETVCKVASGFSDQELDELQKKIEQ--LKRDEKHP 512
Query: 717 RFADTISPDVWFEPTERPETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
R +SPDVW P E A I TC + S + RF R
Sbjct: 513 RVISNMSPDVWVSPAIVAEIIG--AEITISPLHTCCKNDKAGLSIRFPRFVR 562
>gi|385805348|ref|YP_005841746.1| ATP-dependent DNA ligase [Fervidicoccus fontis Kam940]
gi|383795211|gb|AFH42294.1| ATP-dependent DNA ligase [Fervidicoccus fontis Kam940]
Length = 599
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 167/552 (30%), Positives = 292/552 (52%), Gaps = 41/552 (7%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + RI +T+ + ++ + +T+ +++ VVYL ++ P +G+ E+
Sbjct: 3 FEIIARTFDALEKISSRIALTNALVDLFK---QTSKDEVKIVVYLIQGRLWPDWKGMPEI 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM----------MRKPD 301
G+ + +IKA + A E + K Y+E+GDLG + ++S+ ++K +
Sbjct: 60 GVAEKLLIKAASIALNVKEEQINKIYKEVGDLGKAIEQIKASKDATAGTLTSFLGVQKKE 119
Query: 302 PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQ 361
L++ K++++F IA G+ S++ K + LL A E ++++R ++ +LRI + +
Sbjct: 120 KLSVKKIYESFVKIATAEGEGSRDIKLRVLAGLLKDAQPIEARFIVRFVEGRLRINIGDA 179
Query: 362 TLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLS 421
T++ AL A ++P I+++ +++ I L+ DG+ L
Sbjct: 180 TVMDAL-SIAFTGTDANRP-------------IIERAYNLRADLGDIAEILVKDGINALQ 225
Query: 422 NTCSFTP--GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
N TP GIPI PMLA+ ++ K + EYKYDGERAQIH D + I+
Sbjct: 226 N---ITPKVGIPIRPMLAERHNDPKVMLEKVGGKAY-VEYKYDGERAQIHKSND-EITIF 280
Query: 480 SRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVS 539
SR E T ++PDVV SR K +++ EIVA D + +++ PFQ L TR RK+
Sbjct: 281 SRRLENITHQYPDVV-EYSR-KYIKANEAIVEGEIVAIDPDTRELRPFQILMTRKRKHDI 338
Query: 540 LSDIK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
+K V V ++ FD +Y +G+ L L RR++L +S + Q A + ++
Sbjct: 339 TKMMKEVPVSVFLFDAIYVDGKDLTNFPLPERRKYL-ESVIAQSDDMQIAQYKYIDNAED 397
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFH 658
++K A+ EG++IK++ + Y+ R W+K K+DY + DS+DLV + AF+
Sbjct: 398 LEKMFYEAISNGAEGVMIKSISEKSIYQAGNRGWLWIKYKRDYRSEMSDSVDLVVVGAFY 457
Query: 659 GRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF 718
G+GKR G L+A YD + + F+++CK+GTGF++ L++ + + +I P R
Sbjct: 458 GKGKRAGKLSTILVAGYDPDADVFRTVCKVGTGFTDEELDKMTEEFKGYIIDHKDP--RV 515
Query: 719 ADTISPDVWFEP 730
I+PDVW P
Sbjct: 516 ISEITPDVWLIP 527
>gi|390938388|ref|YP_006402126.1| ATP-dependent DNA ligase I [Desulfurococcus fermentans DSM 16532]
gi|390191495|gb|AFL66551.1| DNA ligase I, ATP-dependent Dnl1 [Desulfurococcus fermentans DSM
16532]
Length = 610
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 300/558 (53%), Gaps = 47/558 (8%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+P ++ VF+ I T RI +T ++ + + +T PE + VVYL ++ P + L
Sbjct: 8 IPVRLIADVFERIEVITSRIQMTALLVTLFK---QTPPEIIDRVVYLIQGRLWPDWKELP 64
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS-----------MMR 298
ELG+G+ ++KA+A A +E+ V+ + +GDLG VA+ +S S +
Sbjct: 65 ELGVGEKLLVKAIALATNSSEAQVEDLAKSLGDLGKVAEQLKSRISGRQQGVTLFSFTQQ 124
Query: 299 KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGL 358
+P+ LT+ KV+DT +A G+ S++ K + LL A+ E ++++R ++ +LR+G+
Sbjct: 125 QPE-LTVNKVYDTLVRVAMAQGEGSKDLKIRLLAGLLREASPKEAKFIVRFVEGRLRVGI 183
Query: 359 AEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
E T++ AL A Y + A +++++ +++ K+ L +G+
Sbjct: 184 GEATVMDAL--AITYGGGVA------------ARQVIERAYNLRADLGKVAKILALNGLE 229
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
L N G+PI PMLA+ EI+ K F EYKYDGERAQIH +D V I
Sbjct: 230 ALRNVRP-EVGVPIRPMLAERLSDPKEILEKVGGDAF-IEYKYDGERAQIHK-KDDKVWI 286
Query: 479 YSRNAERNTGKFPDVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
+SR E T ++PDVV LA LK R +++ EIVAYD + ++ PFQ L R RK+
Sbjct: 287 FSRRLENITHQYPDVVELARDHLK---AREVIVEGEIVAYDLDTGELKPFQELMHRKRKH 343
Query: 538 VSLSDIK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLY---DSFEEEPGFFQFATTLTS 593
+ +K V ++ FD+LY +G+ E L VRR L D EE F A + +
Sbjct: 344 EVRTVLKEYPVKVFLFDLLYADGRDYTIEPLPVRRGKLLEIVDRTEE----FTVAEYIRT 399
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
D+ E++KF A+ EG+++K + + Y+ R W+K K+DY + D++DLV
Sbjct: 400 SDVKELEKFFLKAISDGAEGVMVKALHDGSIYQAGTRGWLWIKFKRDYRSEMIDTVDLVV 459
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR 713
+ AF+G+G+R G YGA L+A Y+ + F+++CK+G+GF + L++ L+ + +
Sbjct: 460 VGAFYGKGRRGGKYGALLMAAYNDEKDVFETVCKVGSGFKDEDLDKLPEILKPYIRDRKS 519
Query: 714 PYYRFADTISPDVWFEPT 731
P R + PDVW EP
Sbjct: 520 P--RVVAEMEPDVWVEPA 535
>gi|229581496|ref|YP_002839895.1| ATP-dependent DNA ligase [Sulfolobus islandicus Y.N.15.51]
gi|259645315|sp|C3NF77.1|DNLI_SULIN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|228012212|gb|ACP47973.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus Y.N.15.51]
Length = 601
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 168/561 (29%), Positives = 288/561 (51%), Gaps = 35/561 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++L ++ + VVY+ K+ P G EL
Sbjct: 3 FKVIAEYFDKLEKISSRLQLTALLADLLS---KSDKAIIDKVVYIIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPDPL 303
GIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q + L
Sbjct: 60 GIGEKFLIKAISIATNTDENSVENLYKSIGDLGEVARRLKSKQQSTGILGFLGTSSKESL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
+ KV+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ + T+
Sbjct: 120 KVDKVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATV 179
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L A+ A + S A++IV++ +++ I ++ G+ L T
Sbjct: 180 LDAM--AIAFGGGQS------------ASEIVERAYNLRADLGNIAKIIVEKGIEAL-KT 224
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
GIPI PMLA+ EI+ K +YKYDGERAQIH +D + I+SR
Sbjct: 225 LKPEVGIPIRPMLAERLSNPEEILKKVGGSAL-VDYKYDGERAQIHK-KDDKIFIFSRRL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T ++PDVV +S+ + + F+++ EIVA D E +I FQ L R RK+ I
Sbjct: 283 ENITSQYPDVVEYISKYTEG--KEFIIEGEIVAVDPESGEIRSFQELMHRKRKSDIYEAI 340
Query: 544 K-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
K V ++ FD++Y + L VRR+ L +S + + + A + ++++++ F
Sbjct: 341 KEYPVNVFLFDLMYYEDVDYTTKPLEVRRK-LLESIVKPNDYVKIAHHIQVNNVEDLKSF 399
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+GK
Sbjct: 400 FYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGK 459
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R +
Sbjct: 460 RGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKM 517
Query: 723 SPDVWFEPTERPETSNSPASI 743
PD+W EP E + +I
Sbjct: 518 EPDIWVEPVYVAEIIGAEITI 538
>gi|218883590|ref|YP_002427972.1| ATP-dependent DNA ligase [Desulfurococcus kamchatkensis 1221n]
gi|218765206|gb|ACL10605.1| ATP-dependent DNA ligase [Desulfurococcus kamchatkensis 1221n]
Length = 610
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 185/560 (33%), Positives = 298/560 (53%), Gaps = 51/560 (9%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+P ++ VF+ I T RI +T ++ + + +T PE + VVYL ++ P + L
Sbjct: 8 IPVRLIADVFERIEVITSRIQMTALLVTLFK---QTPPEIIDRVVYLIQGRLWPDWKELP 64
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS-----------MMR 298
ELG+G+ ++KA+A A +E+ V+ + +GDLG VA+ +S S +
Sbjct: 65 ELGVGEKLLVKAIALATNSSEAQVEDLAKSLGDLGKVAEQLKSRISGRQQGVTLFSFTQQ 124
Query: 299 KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGL 358
+P+ LT+ KV+DT +A G+ S++ K + LL A+ E ++++R + +LR+G+
Sbjct: 125 QPE-LTVNKVYDTLVRVAMAQGEGSKDLKIRLLAGLLREASPKEAKFIVRFAEGRLRVGI 183
Query: 359 AEQTLLAAL-----GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL 413
E T++ AL G AA Q + N+++ L E AKI L
Sbjct: 184 GEATVMDALAITYGGGAAA--RQVIERAYNLRADLGEVAKI-----------------LA 224
Query: 414 TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
+G+ L N G+PI PMLA+ EI+ K F EYKYDGERAQIH +D
Sbjct: 225 LNGLEALRNVRP-EVGVPIRPMLAERLSDPKEILEKVGGDAF-VEYKYDGERAQIHK-KD 281
Query: 474 GSVEIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLST 532
V I+SR E T ++PDV+ LA LK R +++ EIVAYD + ++ PFQ L
Sbjct: 282 DKVWIFSRRLENITHQYPDVIELARDHLK---AREVIVEGEIVAYDLDTGELKPFQELMH 338
Query: 533 RARKNVSLSDIK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
R RK+ + +K V ++ FD+LY +G+ E L VRR L + + F A +
Sbjct: 339 RKRKHEVRTALKEYPVKVFLFDLLYADGRDYTIEPLPVRRGKLLEIVDRTDEF-TVAEYI 397
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
+ D+ E++KF A+ EG+++K + + Y+ R W+K K+DY + D++DL
Sbjct: 398 RTSDVKELEKFFLKAISDGAEGVMVKALHDGSIYQAGTRGWLWIKFKRDYRSEMIDTVDL 457
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
V + AF+G+G+R G YGA L+A Y+ + F+++CK+G+GF + L++ L+ + +
Sbjct: 458 VVVGAFYGKGRRGGKYGALLMAAYNDEKDVFETVCKVGSGFKDEDLDKLPEILKPYIRDR 517
Query: 712 PRPYYRFADTISPDVWFEPT 731
P R + PDVW EP
Sbjct: 518 KSP--RVVAEMEPDVWVEPA 535
>gi|15384023|gb|AAK96101.1|AF393466_39 ATP-dependent DNA ligase [uncultured crenarchaeote 74A4]
Length = 589
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 165/521 (31%), Positives = 276/521 (52%), Gaps = 40/521 (7%)
Query: 220 LRTVMETTPEDLVP-VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQ 278
L + E TP D++ + YL K+ P EG+ELG+ + ++A++++ G ++ +Y
Sbjct: 26 LVELFEKTPHDVISKITYLLQGKLRPDFEGIELGVAEKLAMRAISKSSGIAIKKIEDEYN 85
Query: 279 EMGDLGLVAKASRSSQSMMRKPDPL------TITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
+ G +++ S +K L T+ +V+ T IA+ G SQ+ K I
Sbjct: 86 K----GRRSRSCSRKNSTTKKHTQLSLVANLTVERVYATLFKIARLEGSRSQDMKIKYIS 141
Query: 333 ALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAA 392
+LL A E Y++++L LR+G+AE T++ AL A N+++ K
Sbjct: 142 SLLNDANPLEATYILKILLGTLRLGVAENTVMDALAIAYSGNKENRK------------- 188
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI--PIGPMLAKPTKGVSEIVNKF 450
+++ ++V K+ + +G+ + F + PI PMLA K +E++ K
Sbjct: 189 -MLEHAYNVSSDLGKVAEIIAIEGIKGIE---EFKIELFNPIRPMLADRVKSENEVIEKM 244
Query: 451 QDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
+ EF EYK DGER QIH +E +E++SR+ E+ + +PD++ + ++ + + +L
Sbjct: 245 GN-EFAIEYKLDGERVQIH-IEGDKIELFSRSLEKISNYYPDIIEKIPKIFQAE--NAIL 300
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK-VDVCIYAFDILYRNGQPLLQEQLRV 569
+ EIVA + LPFQ L R RK +K + + FD+LY NG+ +
Sbjct: 301 EAEIVAINENTGDFLPFQELMHRRRKYKIEKAVKEYPITVNFFDVLYCNGKNCTELSYHE 360
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSK 629
RR+ L ++ +E F ++ + +EI++F + +++A EGL++K +D+ Y+
Sbjct: 361 RRKKL-ENIVKENEFAKYIPMTIAKTENEIEEFFENSINAGSEGLMLKMLDK--PYQAGA 417
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
R +WLKLK++Y +GDSLDLV I F G+G+RTG YG LLA YD N + F SICK+G
Sbjct: 418 RGSHWLKLKREYRNELGDSLDLVVIGGFFGKGRRTGSYGTLLLATYDQNTDTFPSICKVG 477
Query: 690 TGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
TGF++ L++ L K+ K P R + DVWFEP
Sbjct: 478 TGFTDESLDQLYQILNPKITIKKNP--RVNSEMEADVWFEP 516
>gi|315427934|dbj|BAJ49525.1| ATP-dependent DNA ligase [Candidatus Caldiarchaeum subterraneum]
Length = 584
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 282/553 (50%), Gaps = 54/553 (9%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV-PVVYLAANKIAPAHEGLEL 251
F L+ ++ + T R+ +TDI+ +L TP D++ VVY+ +I PA+ GLEL
Sbjct: 3 FRELADFYERLEATTKRLEMTDILAELL----SKTPPDIIDKVVYMTLGEIYPAYRGLEL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRK-------PDPLT 304
G+ + ++ + + G E V + Y GD+G ++ ++RK LT
Sbjct: 59 GVAEKLALRVVKQVTGAHEKEVDEAYARHGDVG------NAAMVLLRKKPQTTLFAQELT 112
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ V+ F IA+ G + + K + + LL A+ E ++++R++ +R+G+A+ T+L
Sbjct: 113 VQDVYTAFEKIARSTGPGAVDVKMSILAGLLAQASPVEAKHILRMVTGNMRLGVADMTIL 172
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
AL +A + + N+ S + A LT
Sbjct: 173 DALAKAFGGEREVYERAYNLSSDIGLVA--------------------LTAAREGPEGVR 212
Query: 425 SFTP--GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
F GIP+ MLA+ EI+ K F EYKYDGER QIH +V I+SR
Sbjct: 213 RFRVRVGIPVRCMLAERLASAEEILEKVGGRGF-AEYKYDGERMQIHK-SGQTVVIFSRR 270
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLS 541
E T ++PDVV V+R S + +L+CE V D E + LPFQ L R RK + +
Sbjct: 271 QENITSQYPDVVEMVTR--GVSAKEAILECEAVPLDPETGETLPFQELMHRKRKKEIEKA 328
Query: 542 DIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
+ V +Y FDILY +G+ L + L +RR+ L + E + +T +E++K
Sbjct: 329 AEEYPVALYFFDILYVDGEDLTTQPLPIRRKRL-EEIVVESERMKLSTGRMVETPEEVEK 387
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
F AV+A CEGL+IK++D ++ Y R W+KLK+DY + D++DLV + AFHGRG
Sbjct: 388 FFAEAVEAGCEGLMIKSVDEESVYRAGARGWQWIKLKRDYRSEMIDTVDLVVVGAFHGRG 447
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRF 718
+R G YGA L+A Y+ + FQ++CK+G+GF + LE ER + LR + P R
Sbjct: 448 RRKGRYGALLMAVYNPEKDVFQTVCKVGSGFKDVDLETLTERVNRLR---LESKHP--RV 502
Query: 719 ADTISPDVWFEPT 731
+ PD+W +P+
Sbjct: 503 EALMEPDIWVQPS 515
>gi|315426313|dbj|BAJ47954.1| ATP-dependent DNA ligase [Candidatus Caldiarchaeum subterraneum]
gi|343485110|dbj|BAJ50764.1| ATP-dependent DNA ligase [Candidatus Caldiarchaeum subterraneum]
Length = 584
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 282/553 (50%), Gaps = 54/553 (9%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV-PVVYLAANKIAPAHEGLEL 251
F L+ ++ + T R+ +TDI+ +L TP D++ VVY+ +I PA+ GLEL
Sbjct: 3 FRELADFYERLEATTKRLEMTDILAELL----SKTPPDIIDKVVYMTLGEIYPAYRGLEL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRK-------PDPLT 304
G+ + ++ + + G E V + Y GD+G ++ ++RK LT
Sbjct: 59 GVAEKLALRVVKQVTGAHEKEVDEAYARHGDVG------NAAMVLLRKKPQTTLFAQELT 112
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ V+ F IA+ G + + K + + LL A+ E ++++R++ +R+G+A+ T+L
Sbjct: 113 VQDVYTAFEKIARSTGPGAVDVKMSILAGLLAQASPVEAKHILRMVTGNMRLGVADMTIL 172
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
AL +A + + N+ S + A LT
Sbjct: 173 DALAKAFGGEREVYERAYNLSSDIGLVA--------------------LTAAREGPEGVR 212
Query: 425 SFTP--GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
F GIP+ MLA+ EI+ K F EYKYDGER QIH +V I+SR
Sbjct: 213 RFRVRVGIPVRCMLAERLASAEEILEKVGGRGF-AEYKYDGERMQIHK-SGQTVVIFSRR 270
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLS 541
E T ++PDVV V+R S + +L+CE V D E + LPFQ L R RK + +
Sbjct: 271 QENITSQYPDVVEMVTR--GVSAKEAILECEAVPLDPETGETLPFQELMHRKRKKEIEKA 328
Query: 542 DIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
+ V +Y FDILY +G+ L + L +RR+ L + E + +T +E++K
Sbjct: 329 AEEYPVALYFFDILYVDGEDLTTQPLPIRRKRL-EEIVVESERMKLSTGRMVETPEEVEK 387
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
F AV+A CEGL+IK++D ++ Y R W+KLK+DY + D++DLV + AFHGRG
Sbjct: 388 FFAEAVEAGCEGLMIKSVDEESVYRAGARGWQWIKLKRDYRSEMIDTVDLVVVGAFHGRG 447
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE---ERSSSLRSKVIPKPRPYYRF 718
+R G YGA L+A Y+ + FQ++CK+G+GF + LE ER + LR + P R
Sbjct: 448 RRKGRYGALLMAVYNPEKDVFQTVCKVGSGFKDVDLETLTERVNRLR---LDAKHP--RV 502
Query: 719 ADTISPDVWFEPT 731
+ PD+W +P+
Sbjct: 503 EALMEPDIWVQPS 515
>gi|429217614|ref|YP_007175604.1| ATP-dependent DNA ligase [Caldisphaera lagunensis DSM 15908]
gi|429134143|gb|AFZ71155.1| ATP-dependent DNA ligase [Caldisphaera lagunensis DSM 15908]
Length = 610
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 187/572 (32%), Positives = 300/572 (52%), Gaps = 53/572 (9%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+PF ++ FD + T RI +T ++ +++ +T PE + VVYL ++ P + +
Sbjct: 8 LPFREVAETFDSMEKITSRISLTQLLVKLIK---DTPPEVIGKVVYLIQGRLGPDWKDIP 64
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA-SRSSQ---SMM----RKPD 301
ELG+G+ II+AL+ A G+TE V K Y +GDLG VA++ S+S Q S+M +
Sbjct: 65 ELGVGEKLIIQALSIAFGKTEQEVNKIYNSVGDLGKVAESFSQSKQKKSSLMAFIGSESS 124
Query: 302 PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQ 361
LT+ +VFD+F IA G+ S++ K I LL A E +Y++R L+ +LR+G+ +
Sbjct: 125 YLTVGRVFDSFLKIAYSQGEGSRDLKLRLIAGLLKDAQPIEARYIVRFLEGRLRLGIGDA 184
Query: 362 TLLAAL----GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGV 417
T+L AL G + Y E IV++ +++ +I + T G+
Sbjct: 185 TILDALSISYGGSTSYRE------------------IVERAYNLRADLGEIAYIIATQGI 226
Query: 418 WNLSNTCSFTP--GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG- 474
++ P G PI PMLA+ EI+ K Q F EYKYDGER Q H +DG
Sbjct: 227 ESIK---ELKPEIGTPIRPMLAERLSDPEEILQKVQGKGF-VEYKYDGERGQFH--KDGD 280
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRS--FVLDCEIVAYDREKQKILPFQTLST 532
+V I+SR E T +PDVV A+ K SV+S + + EIVAYD + ++ PFQ L
Sbjct: 281 NVRIFSRRLEDITDMYPDVVEAI----KNSVKSNKVIFEGEIVAYDTDTGELRPFQELMH 336
Query: 533 RARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
R RK ++ ++ V + FD+L + L ++ L RR+ L ++ E A +
Sbjct: 337 RRRKYDIQKMVEEIPVKAFLFDVLLNEDEDLTRKTLPYRRKIL-ENIVNETDKINIAKYI 395
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
+ D + F A+ EG+++K + ++ Y R W+KLK+DY + D++DL
Sbjct: 396 ETDDPKTLWNFFLTAISEGAEGVMVKAIHDESIYRAGVRGWLWIKLKRDYKSEMTDTVDL 455
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
V + F+GRG+R G G L A YD N+ F+++CK+G+G+++ L + + +I
Sbjct: 456 VAVGGFYGRGRRGGKIGTLLFAAYDPENDVFRTVCKVGSGYTDDDLNKMYDLFKPYIIDH 515
Query: 712 PRPYYRFADTISPDVWFEPTERPETSNSPASI 743
P R +I PD+WFEP E + ++
Sbjct: 516 KHP--RVESSIEPDLWFEPVRVAEIIGAELTL 545
>gi|14423679|sp|Q9P9K9.1|DNLI_SULSH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|7341364|gb|AAF61267.1|AF242877_1 DNA ligase [Sulfolobus shibatae]
Length = 601
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 167/563 (29%), Positives = 288/563 (51%), Gaps = 35/563 (6%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+ F ++ FD + + R+ +T ++ ++L ++ + VVY+ K+ P G
Sbjct: 1 MEFKVIAEYFDKLEKISSRLQLTALLADLLS---KSDKAIIDKVVYIIQGKLWPDFLGYP 57
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPD 301
ELGIG+ +IKA++ A E+ V+ Y+ GDLG VA+ +S Q +
Sbjct: 58 ELGIGEKFLIKAISIATNTDENSVENLYKSTGDLGEVARRLKSKQQSTGILGFLGTSSKE 117
Query: 302 PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQ 361
LT+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ +
Sbjct: 118 SLTVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDA 177
Query: 362 TLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLS 421
T+L A+ A + S A++IV++ +++ I ++ G+ L
Sbjct: 178 TVLDAM--AIAFGGGQS------------ASEIVERAYNLRADLGNIAKIIVEKGIEAL- 222
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
T GIPI PMLA+ EI+ K +YKYDGERAQIH D + I+SR
Sbjct: 223 KTLKPEVGIPIRPMLAERLSNPEEILKKVGGSAL-VDYKYDGERAQIHKKSD-KIFIFSR 280
Query: 482 NAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLS 541
E T ++PDVV +S+ + + F+++ EIVA D E ++ FQ L R RK+
Sbjct: 281 RLENITSQYPDVVEYISKYVEG--KEFIIEGEIVAVDPESGEMRAFQELMHRKRKSDIYE 338
Query: 542 DIK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
IK V ++ FD++Y + L VRR+ L +S + + + A + ++++++
Sbjct: 339 AIKEYPVNVFLFDLMYYEDVDYTTKPLEVRRK-LLESIVKPNDYVKIAHHIQVNNVEDLK 397
Query: 601 KFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
F A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+
Sbjct: 398 SFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGK 457
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD 720
GKR G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R
Sbjct: 458 GKRGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNS 515
Query: 721 TISPDVWFEPTERPETSNSPASI 743
+ PD+W EP E + +I
Sbjct: 516 KMEPDIWIEPVYVAEIIGAEITI 538
>gi|21227997|ref|NP_633919.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
gi|74524266|sp|Q8PVR7.1|DNLI1_METMA RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|20906425|gb|AAM31591.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
Length = 579
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 264/519 (50%), Gaps = 39/519 (7%)
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-KASRSSQ 294
YL PA E LGI D I+A+A A G T V+K+Y GDLG VA + S+ +
Sbjct: 43 YLFLGSTGPAFENTTLGIKDMLAIRAIAGAYGVTREDVRKRYARTGDLGDVAFELSKKRE 102
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
S LTI VF I + +GK SQE+K +L AT E +Y++RL+ +L
Sbjct: 103 S------SLTIEDVFQRLLQIRETSGKGSQEEKTALFSDILQKATPEEGKYIVRLVLGRL 156
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
R+G +Q LL A A +++H AAKI K+ +SV ++ L
Sbjct: 157 RLGFGDQFLLEAFAIAFTGDKKH-------------AAKI-KESYSVCTDIGELAKILAE 202
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
+G + S PG P+ ML++ + E+ + + + E KYDGER Q+H +G
Sbjct: 203 NGA-RATGFISIKPGRPVKSMLSQRVESFEELEKRVKGKK-AAEEKYDGERVQVHKTGEG 260
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY---DREKQKI---LPFQ 528
++ +SR E T ++P+++ V K VLD EIVAY +R +I PFQ
Sbjct: 261 -IKAFSRRLEDITSQYPEIIEDVR--KTVPANEIVLDGEIVAYAELERNGNRIEEFYPFQ 317
Query: 529 TLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
L R RK + K V ++ FDILY NG+PLL+ RR L + E G +
Sbjct: 318 NLMQRRRKYEIENYRKKCPVAVFFFDILYLNGEPLLKRPYPERR-ALLEMNVVESGIIRL 376
Query: 588 ATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGD 647
+ + + ++EI+ F + ++ EG+++K+M ++ YE KRS W K K++Y E + +
Sbjct: 377 SKRIVTESVEEIEDFFNETIEKGLEGIVVKSMSSNSYYEAGKRSWFWFKWKQEYSEGMRE 436
Query: 648 SLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSK 707
+ DLV + +++GRG+R G +GA L A + + F+++ K+GTGF+EA EE + L
Sbjct: 437 TFDLVVVGSYYGRGRRKGSFGALLCAVLNKEGQRFETLTKVGTGFTEADAEEINRLLSDH 496
Query: 708 VIPKPRPYYRFADTISPDVWFEPTE-----RPETSNSPA 741
++ + + PD++ EP E +NSP
Sbjct: 497 IVSEIPKGVSIKKGMLPDIFIEPAVVIEVLGSEITNSPG 535
>gi|229579844|ref|YP_002838243.1| ATP-dependent DNA ligase [Sulfolobus islandicus Y.G.57.14]
gi|259645316|sp|C3N834.1|DNLI_SULIY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|228010559|gb|ACP46321.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus Y.G.57.14]
Length = 601
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 288/561 (51%), Gaps = 35/561 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++L ++ + VVY+ K+ P G EL
Sbjct: 3 FKVIAEYFDKLEKISSRLQLTALLADLLS---KSDKAIIDKVVYIIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPDPL 303
GIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q + L
Sbjct: 60 GIGEKFLIKAISIATNTDENSVENLYKSIGDLGEVARRLKSKQQSTGILGFLGTSSKESL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ + T+
Sbjct: 120 KVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATV 179
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L A+ A + S A++IV++ +++ I ++ G+ L T
Sbjct: 180 LDAM--AIAFGGGQS------------ASEIVERAYNLRADLGNIAKIIVEKGIEAL-KT 224
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
GIPI PMLA+ EI+ K +YKYDGERAQIH +D + I+SR
Sbjct: 225 LKPEVGIPIRPMLAERLSNPEEILKKVGGSAL-VDYKYDGERAQIHK-KDDKIFIFSRRL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T ++PDVV +S+ + + F+++ EIVA D E ++ FQ L R RK+ I
Sbjct: 283 ENITSQYPDVVEYISKYTEG--KEFIIEGEIVAVDPESGEMRSFQELMHRKRKSDIYEAI 340
Query: 544 K-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
K V ++ FD++Y + L VRR+ L +S + + + A + ++++++ F
Sbjct: 341 KEYPVNVFLFDLMYYEDVDYTTKPLEVRRK-LLESIVKPNDYVKIAHHIQVNNIEDLKSF 399
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+GK
Sbjct: 400 FYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGK 459
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R +
Sbjct: 460 RGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKM 517
Query: 723 SPDVWFEPTERPETSNSPASI 743
PD+W EP E + +I
Sbjct: 518 EPDIWVEPVYVAEIIGAEITI 538
>gi|385773884|ref|YP_005646451.1| ATP-dependent DNA ligase I [Sulfolobus islandicus HVE10/4]
gi|385776526|ref|YP_005649094.1| ATP-dependent DNA ligase I [Sulfolobus islandicus REY15A]
gi|323475274|gb|ADX85880.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus REY15A]
gi|323477999|gb|ADX83237.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus HVE10/4]
Length = 601
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 288/561 (51%), Gaps = 35/561 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++L ++ + VVY+ K+ P G EL
Sbjct: 3 FKVIAEYFDKLEKISSRLQLTALLADLLS---KSDKAIIDKVVYIIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPDPL 303
GIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q + L
Sbjct: 60 GIGEKFLIKAISIATNTDENSVENLYKSIGDLGEVARRLKSKQQSTGILGFLGTSSKESL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ + T+
Sbjct: 120 KVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATV 179
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L A+ A + S A++IV++ +++ I ++ G+ L T
Sbjct: 180 LDAM--AIAFGGGQS------------ASEIVERAYNLRADLGNIAKIIVEKGIEAL-KT 224
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
GIPI PMLA+ EI+ K +YKYDGERAQIH +D + I+SR
Sbjct: 225 LKPEVGIPIRPMLAERLSNPEEILKKVGGSAL-VDYKYDGERAQIHK-KDDKIFIFSRRL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T ++PDVV +S+ + + F+++ EIVA D E ++ FQ L R RK+ I
Sbjct: 283 ENITSQYPDVVEYISKYTEG--KEFIIEGEIVAVDPESGEMRSFQELMHRKRKSDIYEAI 340
Query: 544 K-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
K V ++ FD++Y + L VRR+ L +S + + + A + ++++++ F
Sbjct: 341 KEYPVNVFLFDLMYYEDVDYTTKPLEVRRK-LLESIVKPNDYVKIAHHIQVNNVEDLKSF 399
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+GK
Sbjct: 400 FYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGK 459
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R +
Sbjct: 460 RGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKM 517
Query: 723 SPDVWFEPTERPETSNSPASI 743
PD+W EP E + +I
Sbjct: 518 EPDIWVEPVYVAEIIGAEITI 538
>gi|227828207|ref|YP_002829987.1| ATP-dependent DNA ligase [Sulfolobus islandicus M.14.25]
gi|227830966|ref|YP_002832746.1| ATP-dependent DNA ligase [Sulfolobus islandicus L.S.2.15]
gi|229585436|ref|YP_002843938.1| ATP-dependent DNA ligase [Sulfolobus islandicus M.16.27]
gi|238620398|ref|YP_002915224.1| ATP-dependent DNA ligase [Sulfolobus islandicus M.16.4]
gi|259645311|sp|C3MZR1.1|DNLI_SULIA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|259645312|sp|C4KIZ2.1|DNLI_SULIK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|259645313|sp|C3MJ14.1|DNLI_SULIL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|259645314|sp|C3MYD2.1|DNLI_SULIM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|227457414|gb|ACP36101.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus L.S.2.15]
gi|227460003|gb|ACP38689.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus M.14.25]
gi|228020486|gb|ACP55893.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus M.16.27]
gi|238381468|gb|ACR42556.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus M.16.4]
Length = 601
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 288/561 (51%), Gaps = 35/561 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++L ++ + VVY+ K+ P G EL
Sbjct: 3 FKVIAEYFDKLEKISSRLQLTALLADLLS---KSDKAIIDKVVYIIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPDPL 303
GIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q + L
Sbjct: 60 GIGEKFLIKAISIATNTDENSVENLYKSIGDLGEVARRLKSKQQSTGILGFLGTSSKESL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ + T+
Sbjct: 120 KVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATV 179
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L A+ A + S A++IV++ +++ I ++ G+ L T
Sbjct: 180 LDAM--AIAFGGGQS------------ASEIVERAYNLRADLGNIAKIIVEKGIEAL-KT 224
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
GIPI PMLA+ EI+ K +YKYDGERAQIH +D + I+SR
Sbjct: 225 LKPEVGIPIRPMLAERLSNPEEILKKVGGSAL-VDYKYDGERAQIHK-KDDKIFIFSRRL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T ++PDVV +S+ + + F+++ EIVA D E ++ FQ L R RK+ I
Sbjct: 283 ENITSQYPDVVEYISKYTEG--KEFIIEGEIVAVDPESGEMRSFQELMHRKRKSDIYEAI 340
Query: 544 K-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
K V ++ FD++Y + L VRR+ L +S + + + A + ++++++ F
Sbjct: 341 KEYPVNVFLFDLMYYEDVDYTTKPLEVRRK-LLESIVKPNDYVKIAHHIQVNNVEDLKSF 399
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+GK
Sbjct: 400 FYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGK 459
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R +
Sbjct: 460 RGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKM 517
Query: 723 SPDVWFEPTERPETSNSPASI 743
PD+W EP E + +I
Sbjct: 518 EPDIWVEPVYVAEIIGAEITI 538
>gi|154278200|gb|ABS72370.1| DNA ligase [Sulfophobococcus zilligii]
Length = 606
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 183/571 (32%), Positives = 292/571 (51%), Gaps = 42/571 (7%)
Query: 213 TDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-ELGIGDASIIKALAEACGRTES 271
T +V ++ +T PE + VVYL + P +G+ ELG+G+ +IKA++ AC +E
Sbjct: 23 TQLVAFLVNLFKQTPPEIIDKVVYLVQGILWPDWKGMPELGVGEKMLIKAISLACNISER 82
Query: 272 HVKKQYQEMGDLG-LVAKASRSSQS---------MMRKPDPLTITKVFDTFRLIAKEAGK 321
V+K +E+GD+G K +++QS ++P LT+T ++T IA G+
Sbjct: 83 EVEKTAKEIGDIGKATEKLKQTAQSKQTGLTIFAFTQQPTGLTVTNTYNTLVKIAMAQGE 142
Query: 322 DSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG---QAAVYNEQHS 378
S++ K + LL A+ E +++++ ++ KLR+G+ + T++ AL V N
Sbjct: 143 GSKDLKIRLLAGLLKDASPKEAKFIVKFVEGKLRVGIGDATIMDALAVTFGGGVANRPVI 202
Query: 379 KPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAK 438
+ N++S L E AKI L + G+ L G+PI PMLA+
Sbjct: 203 ERAYNLRSDLGEVAKI-----------------LASKGIEELKKIKPEV-GVPIRPMLAE 244
Query: 439 PTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVS 498
EI+ K F EYKYDGERAQIH D + IYSR E T ++PDVV
Sbjct: 245 RLSDPREILVKTGGEAF-VEYKYDGERAQIHKKGD-KIWIYSRRLENITSQYPDVV--ER 300
Query: 499 RLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK-VDVCIYAFDILYR 557
L+K +++ EIV YD + ++ PFQ L R RK+ IK V ++ FD+LY
Sbjct: 301 ALEKIKADEAIVEGEIVVYDPDTGELKPFQELMHRKRKHDIRQAIKEYPVKVFLFDLLYL 360
Query: 558 NGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIK 617
NG+ + L VRRE L ++ F A + + + +E++KF A+ EG++ K
Sbjct: 361 NGEDYTLKPLPVRREALEKIIDKTEDF-TIAEYIKTSNPEELEKFFLEAIGNGVEGVMAK 419
Query: 618 TMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDS 677
+ +D+ Y+ R W+K K+DY + D++DLV + AF+G+G+R G YGA L+A Y+
Sbjct: 420 AIHKDSIYQAGVRGWLWIKYKRDYKSEMADTVDLVVVGAFYGKGRRGGKYGALLMAAYNK 479
Query: 678 NNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETS 737
+ F+++CK+G+GF + L++ L+ + + R + R I PDVW +P E
Sbjct: 480 EKDVFETVCKVGSGFKDEDLDKLPDMLKPYI--RDRKHPRVVAEIEPDVWVDPVLVAEII 537
Query: 738 NSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
A + TC P + RF R
Sbjct: 538 G--AELTLSPIHTCAKGVIKPDAGISIRFPR 566
>gi|452210460|ref|YP_007490574.1| ATP-dependent DNA ligase [Methanosarcina mazei Tuc01]
gi|452100362|gb|AGF97302.1| ATP-dependent DNA ligase [Methanosarcina mazei Tuc01]
Length = 579
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 263/519 (50%), Gaps = 39/519 (7%)
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-KASRSSQ 294
YL PA E LGI D I+A+A A G T V K+Y GDLG VA + S+ +
Sbjct: 43 YLFLGSTGPAFENTTLGIKDMLAIRAIAGAYGVTREDVSKRYARTGDLGDVAFELSKKRE 102
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
S LTI VF I + +GK SQE+K +L AT E +Y++RL+ +L
Sbjct: 103 S------SLTIEDVFQRLLQIRETSGKGSQEEKTALFSDILQKATPEEGKYIVRLVLGRL 156
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
R+G +Q LL A A +++H AAKI K+ +SV ++ L
Sbjct: 157 RLGFGDQFLLEAFAIAFTGDKKH-------------AAKI-KESYSVCTDIGELAKILAE 202
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
+G + S PG P+ ML++ + E+ + + + E KYDGER Q+H +G
Sbjct: 203 NGA-RATGFISIKPGRPVKSMLSQRVESFEELEKRVKGKK-AAEEKYDGERVQVHKTGEG 260
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY---DREKQKI---LPFQ 528
++ +SR E T ++P+++ V K VLD EIVAY +R +I PFQ
Sbjct: 261 -IKAFSRRLEDITSQYPEIIEDVR--KTVPANEIVLDGEIVAYAELERNGNRIEEFYPFQ 317
Query: 529 TLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
L R RK + K V ++ FDILY NG+PLL+ RR L + E G +
Sbjct: 318 NLMQRRRKYEIENYRKKCPVAVFFFDILYLNGEPLLKRPYPERR-ALLEMNVVESGIIRL 376
Query: 588 ATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGD 647
+ + + ++EI+ F + ++ EG+++K+M ++ YE KRS W K K++Y E + +
Sbjct: 377 SKRIVTESVEEIEDFFNETIEKGLEGIVVKSMSSNSYYEAGKRSWFWFKWKQEYSEGMRE 436
Query: 648 SLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSK 707
+ DLV + +++GRG+R G +GA L A + + F+++ K+GTGF+EA EE + L
Sbjct: 437 TFDLVVVGSYYGRGRRKGSFGALLCAVLNKEGQRFETLTKVGTGFTEADAEEINRLLSDH 496
Query: 708 VIPKPRPYYRFADTISPDVWFEPTE-----RPETSNSPA 741
++ + + PD++ EP E +NSP
Sbjct: 497 IVSEIPKDVSIKKGMLPDIFIEPAVVIEVLGSEITNSPG 535
>gi|284998454|ref|YP_003420222.1| ATP-dependent DNA ligase I [Sulfolobus islandicus L.D.8.5]
gi|284446350|gb|ADB87852.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus L.D.8.5]
Length = 601
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 287/561 (51%), Gaps = 35/561 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++L ++ + VVY+ K+ P G EL
Sbjct: 3 FKVIAEYFDKLEKISSRLQLTALLADLLS---KSDKAIIDKVVYIIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPDPL 303
GIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q + L
Sbjct: 60 GIGEKFLIKAISIATNTDENSVENLYKSIGDLGEVARRLKSKQQSTGILGFLGTSSKESL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ + T+
Sbjct: 120 KVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATV 179
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L A+ A + S A++IV++ +++ I ++ G+ L T
Sbjct: 180 LDAM--AIAFGGGQS------------ASEIVERAYNLRADLGNIAKIIVEKGIEAL-KT 224
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
GIPI PMLA+ EI+ K +YKYDGERAQIH +D + I+SR
Sbjct: 225 LKPEVGIPIRPMLAERLSNPEEILKKVGGSAL-VDYKYDGERAQIHK-KDDKIFIFSRRL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T ++PDVV +S+ + + F+++ EIVA D E ++ FQ L R RK+ I
Sbjct: 283 ENITSQYPDVVEYISKYTEG--KEFIIEGEIVAVDPESGEMRSFQELMHRKRKSDIYEAI 340
Query: 544 K-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
K V ++ FD++Y + L VRR+ L +S + + + A + ++++++ F
Sbjct: 341 KEYPVNVFLFDLMYYEDVDYTTKPLEVRRK-LLESIVKPNEYVKIAHHIQVNNVEDLKSF 399
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+GK
Sbjct: 400 FYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGK 459
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G + L+A Y+ + F+S+CK +GFS+ L+E L I + + R +
Sbjct: 460 RGGKISSLLMAAYNPKTDTFESVCKAASGFSDEQLDELQKKLME--IKRDIKHPRVNSKM 517
Query: 723 SPDVWFEPTERPETSNSPASI 743
PD+W EP E + +I
Sbjct: 518 EPDIWVEPVYVAEIIGAEITI 538
>gi|296241957|ref|YP_003649444.1| ATP-dependent DNA ligase I [Thermosphaera aggregans DSM 11486]
gi|296094541|gb|ADG90492.1| DNA ligase I, ATP-dependent Dnl1 [Thermosphaera aggregans DSM
11486]
Length = 611
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 187/596 (31%), Positives = 303/596 (50%), Gaps = 51/596 (8%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+PF + F + T R +T I+ N+ + +T P+ + VVYL ++ P +GL
Sbjct: 8 LPFRVIVDFFKKLETTTARTQLTAILVNLFK---QTPPDVIDKVVYLIQARLWPDWKGLP 64
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQ--------SMMRK 299
ELGI + +IKA++ + +E V++ + GD GL +A +RS + + K
Sbjct: 65 ELGIAEKLLIKAISLSTNSSEKVVEEILKSKGDAGLAVEALKTRSLEKSKGVTLFTFAEK 124
Query: 300 PDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLA 359
LT+ KV++ IA G+ S++ K + LL A E +Y++R ++ KLR+G+
Sbjct: 125 KQELTVNKVYEVLTRIALAQGEGSKDLKIRLLAGLLSDANPEEAKYIVRFVEGKLRLGIG 184
Query: 360 EQTLLAALGQAAVY-NEQHSKP----PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
+ T++ AL + VY H +P N+++ L E AKI L +
Sbjct: 185 DATIMDAL--SIVYAGGAHLRPLIERAYNLRADLGEVAKI-----------------LAS 225
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
GV + GIPI PMLA+ EI+ K + F E+KYDGERAQIH +DG
Sbjct: 226 QGVEAIKQITPMV-GIPIRPMLAERLSDPKEILEKVEGEAF-VEFKYDGERAQIH--KDG 281
Query: 475 S-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
+ + IYSR E T ++PDVV LK +L+ EIVAYD ++ PFQ L R
Sbjct: 282 NKIVIYSRRLENITHQYPDVVEMA--LKNIKAEKAILEGEIVAYDPSTGELKPFQELMHR 339
Query: 534 ARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
RK ++ ++ + V ++ FD+LY G ++L RR+ L + + F + A +
Sbjct: 340 KRKYDIHVAVKENPVKVFLFDLLYEEGVDYTVKRLIERRKRLEEIIVQTEEF-RVAEYIR 398
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
+ D E++KF A+ EG+++K + + Y+ R W+K K+DY + D++DLV
Sbjct: 399 TSDPGELEKFFLQAISEGAEGVMVKALHEGSVYQAGTRGWLWIKFKRDYRSEMVDTVDLV 458
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKP 712
+ AF+GRG+R G +G L+A Y+ +N+ F+++CK+G+GF++ L++ L+ + +
Sbjct: 459 VVGAFYGRGRRGGKFGTLLMASYNPSNDTFETVCKVGSGFTDEDLDKIPELLKPFI--RD 516
Query: 713 RPYYRFADTISPDVWFEPTERPETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
R R + PDVW EP E A + TC P + RF R
Sbjct: 517 RKPLRVVAEMEPDVWVEPALVAEIIG--AELTLSPIHTCAYGKIKPEAGISIRFPR 570
>gi|294495751|ref|YP_003542244.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalophilus mahii DSM 5219]
gi|292666750|gb|ADE36599.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalophilus mahii DSM 5219]
Length = 569
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 173/560 (30%), Positives = 283/560 (50%), Gaps = 45/560 (8%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
+++ + N T + I +++ +++ P ++ YLA I P E ++LGIGD
Sbjct: 10 LYEELDNSTSHMKIIELLAEHFQSL---EPAEVKITAYLALGTIGPRFEKIDLGIGDKYG 66
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKE 318
I+A++ A + V+ + GDLG VA A R+ LT+ VF F I
Sbjct: 67 IQAISRAYNVDKEKVEIAFGNQGDLGDVASALNE-----RQRSSLTLNYVFQHFVQIRDI 121
Query: 319 AGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHS 378
+GK SQ++K N + +L A E +Y++R+ Q LR+G E+ LL AL A + ++
Sbjct: 122 SGKGSQKRKINLLAEVLSKARPLESRYIMRIAQGNLRLGFGEKFLLEALALAFTGSRDNT 181
Query: 379 KPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAK 438
V+ +++ ++ +L G+ +L S G P+ MLA
Sbjct: 182 SK--------------VEDTYNICTDIGQLGESLANHGMDSLGK-FSIKIGRPVQMMLAS 226
Query: 439 PTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVS 498
+ E+ KF E KYDGER Q+H ++ +++ +SR + +FPDV+ A
Sbjct: 227 RVDTMEELNEKFSGT-MAAEEKYDGERVQVH-VDGDNIKAFSRRLTYISAQFPDVIEAA- 283
Query: 499 RLKKPSVRS--FVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDIL 555
+ SV++ VLD EIVAY + + PFQ L R RK +V K+ V ++ FD+L
Sbjct: 284 ---RESVKAEKIVLDGEIVAY--RQGEFRPFQELMQRRRKYHVEEYVKKIPVTVFFFDVL 338
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLI 615
Y NG+ L++ RR+ L ++ E + A + S D IQ F D V+ EG+I
Sbjct: 339 YLNGKSLMKWSYPERRQVLEENLVETEKV-KLAGRVVSADFSRIQHFFDDCVEKGMEGII 397
Query: 616 IKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY 675
IK++ +TY P KR W+K KK+YIE + ++ DLV + +++G+G+R G +GA L A
Sbjct: 398 IKSVKAKSTYRPGKRGWLWVKWKKEYIEDVRETFDLVIVGSYYGKGRRKGSFGALLCAVL 457
Query: 676 DSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT-ISPDVWFEPTERP 734
+ + + ++++ K+GTGF + EE + L+ I K +P D+ + PD + EP
Sbjct: 458 NESEKRYETLAKVGTGFKDEDFEEINDLLKKYSIEK-KPVNILIDSNMQPDNYIEPAVVI 516
Query: 735 ETSNSPASIVYDSQITCLPS 754
E V S+IT PS
Sbjct: 517 E--------VIGSEITSSPS 528
>gi|302348983|ref|YP_003816621.1| ATP-dependent DNA ligase [Acidilobus saccharovorans 345-15]
gi|302329395|gb|ADL19590.1| ATP-dependent DNA ligase [Acidilobus saccharovorans 345-15]
Length = 607
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 180/564 (31%), Positives = 291/564 (51%), Gaps = 54/564 (9%)
Query: 200 FDMISNETGRILITDIVCNMLRTVMETTPEDLV-PVVYLAANKIAPAHEGL-ELGIGDAS 257
F + T RI +T ++ +L+ TP D++ VVY+ +K+ P +G+ ELG+GD
Sbjct: 15 FSSMEGITSRIQLTQLLAGLLKR----TPADVIDKVVYMIQSKLGPDWKGIPELGVGDKL 70
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRK---------PDPLTITKV 308
+++A+A A G++E V+K ++GD G VA+ + ++ LT+++V
Sbjct: 71 LVQAIALAYGKSEGDVQKLVDKLGDPGKVAEQLAQTGGHLKSNLLTFMGGGSSQLTVSRV 130
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL- 367
FD+F IA G+ S++ K + LL A E +Y++R ++ +LR+G+ + T+L AL
Sbjct: 131 FDSFMKIAYATGESSRDLKLKTLAGLLKDAKPIEARYIVRFVEGRLRLGIGDATILDALA 190
Query: 368 ----GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
G +AV + + N+++ L E AKIV T GV L
Sbjct: 191 VAYGGSSAVRD--LIERAYNLRADLGEIAKIVA-----------------TQGVEALKG- 230
Query: 424 CSFTP--GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYS 480
P G PI PMLA+ V EI+ K + EYKYDGER QIH +DG ++I+S
Sbjct: 231 --LKPEVGTPIRPMLAERANDVKEILAKVGGKAY-VEYKYDGERGQIH--KDGDKIKIFS 285
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVS 539
R E T +PD+ V K + +++ EIVA D + ++ PFQ L R RK ++
Sbjct: 286 RRLEDITPMYPDIADGVREAIK--AKKAIVEGEIVAIDPDTGELRPFQELMQRRRKYDIE 343
Query: 540 LSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEI 599
++ ++ FDI+ ++ + L L RR+ L +S E + + S D DEI
Sbjct: 344 KMMKEIPTRLFLFDIIMKDDEDLTTRPLPYRRKVL-ESILEPNDRVVMSNYIASSDPDEI 402
Query: 600 QKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
F A+ EG++IK + ++ Y R W+KLK+DY + D++DLV + AF+G
Sbjct: 403 MNFFLQAIADGAEGVMIKAIHDESVYRAGVRGWLWVKLKRDYRSEMSDTVDLVAVGAFYG 462
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFA 719
+GKR G G LLA YD NN+ F+++CK+G+GF++ + + +I P R
Sbjct: 463 KGKRGGKLGTLLLAAYDPNNDVFKTVCKVGSGFTDEDINNMYDLFKPYIIDHRHP--RVV 520
Query: 720 DTISPDVWFEPTERPETSNSPASI 743
+ DVWFEP + E + ++
Sbjct: 521 SNLDADVWFEPVKVAEVIGAELTL 544
>gi|342320736|gb|EGU12675.1| DNA ligase [Rhodotorula glutinis ATCC 204091]
Length = 946
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 156/492 (31%), Positives = 249/492 (50%), Gaps = 48/492 (9%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
F P + RVPF FLS +IS+ R+ I ++ N+LRTV+E PE L+ +VY
Sbjct: 195 FSPAQDVSFGSHNRVPFSFLSDALVLISSTKSRLFIQLVLTNLLRTVIELDPESLLSLVY 254
Query: 237 LAANKIAPAHE-GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
L +N+I P++E ELGIG + KA+ E G T +K+ + GD G +A + S
Sbjct: 255 LCSNRIGPSYEKDTELGIGWQVLSKAIKETSGATAQKLKQLSNKHGDPGDIAFEASKSVR 314
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
++ KP PL V+ IAK G +K + +K LL++++ + +Y++R+L S LR
Sbjct: 315 LLVKPTPLECHGVYKILTQIAKLKGTGVLNQKTSLVKKLLLSSSGEQVRYIVRILVSNLR 374
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPP------------NIQSPLEEAAKIVKQVFSVLP 403
IG TLL AL +A + + P + L+ A V++V++ P
Sbjct: 375 IGAVRLTLLTALARAFCLSRPKGREPSEESEAQKGQLELEVDEKLKRAEACVRRVWARHP 434
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
+ +V ALL G+ L + G+P+ PML T+ + +I + F E K DG
Sbjct: 435 NFGHLVEALLEGGLEQLEERVGLSIGVPLEPMLGSITRSLDDIYTRLGSRPFVSEAKLDG 494
Query: 464 ERAQIHY---------LEDGS--------------VEIYSRNAERNTGKFPDV------V 494
+R QIH + +GS V ++SR+ E T K+PDV +
Sbjct: 495 QRGQIHVWVGDSRPEGVAEGSGKWFVDEESGRRAWVRMFSRHLEDMTEKYPDVGGTILGI 554
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDI 554
LA + + + +R+FV+DCE+VA D + FQ LS R++K+V L DIKV V IY FD+
Sbjct: 555 LARAEMSETPLRNFVIDCEVVAIDPKTGAFKTFQELSYRSKKDVELGDIKVRVGIYCFDL 614
Query: 555 LYRNGQPLLQEQLRVRREHLYDSF----EEEPGF--FQFATTLTSIDLDEIQKFLDAAVD 608
++ N + LL R RR+ L F +P F ++ T D +++++F + +
Sbjct: 615 MFLNDESLLSRPFRSRRDTLRSLFPPLQPTDPRFAKWELIPCCTDNDPEKVREFFEETLK 674
Query: 609 ASCEGLIIKTMD 620
EG+++K +D
Sbjct: 675 MKAEGIMVKLLD 686
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 78/118 (66%), Gaps = 12/118 (10%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
ATYEP KR+ +WLK+KKDY++ +GDSLDLVPIAA+ G+G++ G + FLLACYD +
Sbjct: 753 ATYEPDKRADSWLKVKKDYLDEVGDSLDLVPIAAWWGQGRKAGWWSPFLLACYDEETGAY 812
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPR-------PYYRF-ADTISPDVWFEPTE 732
++ K +GF++A +E +R K P+P P+ A ++SPD+WF+P E
Sbjct: 813 TAVTKCLSGFTDAFYKE----MREKYNPEPENPLTSKTPWPEVEAGSLSPDIWFKPNE 866
>gi|336476629|ref|YP_004615770.1| ATP-dependent DNA ligase I [Methanosalsum zhilinae DSM 4017]
gi|335930010|gb|AEH60551.1| DNA ligase I, ATP-dependent Dnl1 [Methanosalsum zhilinae DSM 4017]
Length = 569
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 167/525 (31%), Positives = 267/525 (50%), Gaps = 39/525 (7%)
Query: 212 ITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES 271
I ++ + R++ P+D+ YL + P +E ELGI + I+++A+A G +
Sbjct: 23 IVGLLTSFFRSL---DPDDVRTAAYLVLGTVGPEYEDTELGIREKLAIRSIADAFGISRQ 79
Query: 272 HVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRI 331
V+K Y + GDLG A S+ K LTI V D I +G+ SQ+KK +
Sbjct: 80 KVEKTYSDTGDLGDAAFEFSSN-----KNSDLTIRDVMDCLTQIKNTSGEGSQQKKIELL 134
Query: 332 KALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEA 391
+L A+ E +Y++R+ +LR+G EQ +L+AL A +++++ LEEA
Sbjct: 135 AEILARASAMEAKYIMRITLGELRLGFGEQFVLSALAMAFTGDDKNT-------VYLEEA 187
Query: 392 AKIVKQVFSVLPVYEKIVPALLTDGV--WNLSNTCSFTP--GIPIGPMLAKPTKGVSEIV 447
+ + L + V + L++ F+ G P+ MLAK +
Sbjct: 188 YNVCTDI------------GQLAESVSEYGLASIKRFSVKIGRPVRSMLAKRVDKFENLN 235
Query: 448 NKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRS 507
+KF + + E KYDGER Q+H + + +++I+SR + T +FPDVV AV K
Sbjct: 236 DKFPE-QMAAEEKYDGERIQVHIINE-NIQIFSRRLDNITDQFPDVVDAVK--KHIKAEK 291
Query: 508 FVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
VLD E++A+ E I FQ L R RK +V KV V Y FDI+Y NG+ L+
Sbjct: 292 AVLDGEVIAFRNEN--INSFQELMQRRRKYDVEEYVDKVPVVAYMFDIIYLNGKSYLKVP 349
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYE 626
RR L + EE + S D +EI+ F D +D EG+IIK++ ++ Y+
Sbjct: 350 YPHRRTALEEHLEENEKI-RLVERTVSADFNEIRSFFDRCIDKGLEGIIIKSVADNSFYQ 408
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
P KR W+K KK+Y E + D+ DL+ + + G+GKR G++G+ L A + ++++
Sbjct: 409 PGKRGWLWVKWKKEYAEDVRDTFDLIIVGFYSGKGKRQGLFGSLLCAVLNKEKNQYETFT 468
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
++GTGF++ LEE S L K I K P + PD + +P+
Sbjct: 469 RVGTGFTDQDLEEISELLNKKKIKKKPPNLVVEKEMVPDSYIDPS 513
>gi|15920405|ref|NP_376074.1| ATP-dependent DNA ligase [Sulfolobus tokodaii str. 7]
gi|20137895|sp|Q976G4.1|DNLI_SULTO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|15621187|dbj|BAB65183.1| DNA ligase [Sulfolobus tokodaii str. 7]
Length = 600
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 289/574 (50%), Gaps = 47/574 (8%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++ + + + VVYL K+ P G EL
Sbjct: 3 FKLIAEYFDKLEKISSRLQLTALLTDLFKKADKNVID---KVVYLIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA---KASRSSQSMM-----RKPDPL 303
G+G+ +IKA++ A E V++Q + +GDLG VA K + S S++ + + L
Sbjct: 60 GVGEKLLIKAISIAVNVKEEVVEEQLKVVGDLGEVAMRLKKTPQSASILSFLGAQSNEGL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
T+ + +++ IA +G+ S++ K + LL A+ E +Y++R + +LR+G+ + T+
Sbjct: 120 TVEETYESLTKIALASGEGSRDIKIRSLAGLLKKASPLEAKYIVRFVDGRLRVGIGDATI 179
Query: 364 LAALGQAAVYNEQHSKPPP-----NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
+ AL A + S P N+++ L AKI+ Q GV
Sbjct: 180 MDALSTA--FTGSTSFRPLIERAYNLRADLGNIAKIIAQ-----------------QGVE 220
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
L + GIPI PMLA+ +EI+ K E +YKYDGERAQIH +D V I
Sbjct: 221 ALKDIKP-QVGIPIRPMLAERMSDPAEILAKVGG-EALVDYKYDGERAQIHK-KDKEVYI 277
Query: 479 YSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+SR E T +PDVV V + +++ EIVA D E +I PFQ L R RKN
Sbjct: 278 FSRRLENITRMYPDVVEYVREY--INANEVIIEGEIVAVDPESNEIRPFQELMHRKRKND 335
Query: 539 SLSDIK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD 597
IK V +Y FD++ + L RR+ L + + A + + ++D
Sbjct: 336 INEAIKEYPVNVYLFDLMLYEDADYTMKPLPERRKKLEEVIKPNDKL-HIAHHIYTNNVD 394
Query: 598 EIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAF 657
++ +F A+ EG+++K++ +D+ Y+ R W+KLK+DY + DS+DLV + AF
Sbjct: 395 KLMEFFYDAISNGAEGVMVKSVAKDSIYQAGSRGFLWIKLKRDYQSEMADSVDLVVVGAF 454
Query: 658 HGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYR 717
+GRGKR G + L+A YD + F+++CK+ +GFS+A L+E L + K P R
Sbjct: 455 YGRGKRGGKLSSLLMAAYDPETDTFKTVCKVASGFSDAELDELQKKLMEIKLDKKDP--R 512
Query: 718 FADTISPDVWFEPTERPETSNSPASIVYDSQITC 751
+ PD+W EP E A I + TC
Sbjct: 513 VDSQLEPDIWVEPKYVAEIIG--AEITLSPEHTC 544
>gi|374851947|dbj|BAL54893.1| DNA ligase 1 [uncultured Acidobacteria bacterium]
Length = 582
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 273/542 (50%), Gaps = 36/542 (6%)
Query: 195 FLSLV--FDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F LV F+ + T R+ + DI+ ++ R V E++ PVVYL ++AP G+E+G
Sbjct: 3 FARLVDYFERLEATTKRLEMFDILSDLFRDV---EAEEIAPVVYLLEEQLAPPFRGIEIG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTF 312
+ + +++A+A+A G E V Y+++GD GLV + + LT+ V+
Sbjct: 60 MAEKLVLRAIAKATGVEEGRVTTLYKKLGDPGLVVERLLEQKKEASARGKLTVLAVYTRL 119
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
IA++ G+ S E+K + LL A E +Y+ R + +LR+G+ + T+L AL + AV
Sbjct: 120 MEIAEQTGEGSVERKIQGLSDLLAEAGPKEARYIARFVMGRLRLGIGDPTILDALSK-AV 178
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
++ +P LE A + S L + + + DG+ G PI
Sbjct: 179 AGDRSLRP------ELERAYNLC----SDLGLVARTLREQGLDGI----RAFRVRVGHPI 224
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
LA+ EI+ + E K DG R Q+H + +VEI+SRN ER T FPD
Sbjct: 225 RMALAERLPTAEEIIRRLG--RCAVEVKIDGFRCQVHK-QGNTVEIFSRNLERTTPMFPD 281
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN-VSLSDIKVDVCIYA 551
+V V ++ + R + + E VA + E +I PFQ R RK+ V+ + + +YA
Sbjct: 282 IVEGVR--QQVAAREAIFEGEAVAVNEETGEIYPFQVTVQRKRKHGVAEMAREYPLVLYA 339
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPG-FFQFATTLTSIDLDEIQKFLDAAVDAS 610
FD+LY +G E RRE L PG + A + + D +++F + +++
Sbjct: 340 FDLLYSDGVDYTPEPYERRREALERMI--RPGDRLKLAEMIITDDPKVVERFFEESIERG 397
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV-YGA 669
EG++ K + DA Y+ R +W+KLK+ Y + D+LD+V I FHGRG R + GA
Sbjct: 398 LEGIVAKRL--DAPYQAGARGFHWIKLKRSYKGELSDTLDVVLIGYFHGRGSRARLGIGA 455
Query: 670 FLLACYDSNNEEFQSICKIGTGFS-EAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
L A YD ++ F++I KIG+G S E + R RS+V +P R I PDVW
Sbjct: 456 LLGAVYDEESDTFKTIAKIGSGLSEEEWVRIRELLDRSRVSHRP---ARVDSLIEPDVWV 512
Query: 729 EP 730
EP
Sbjct: 513 EP 514
>gi|73669153|ref|YP_305168.1| DNA ligase (ATP) [Methanosarcina barkeri str. Fusaro]
gi|121725644|sp|Q46C04.1|DNLI1_METBF RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|72396315|gb|AAZ70588.1| DNA ligase (ATP) [Methanosarcina barkeri str. Fusaro]
Length = 549
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 264/527 (50%), Gaps = 42/527 (7%)
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL I PA E + LGIGD +KA+A A +E VKK+Y GDLG VA +
Sbjct: 11 YLFLGSIGPAFENITLGIGDKLALKAIAGAYRVSEEEVKKRYSRTGDLGDVAFELNQGEE 70
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
L I +VF + + I + +GK SQE+K + ++L A+ E +Y++R++ KLR
Sbjct: 71 -----KSLAIDEVFGSLKEIKEASGKGSQEEKTGLLSSILQRASPKEGKYIVRIVLGKLR 125
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTD 415
+G +Q LL A A ++++ +K+ +SV ++ +L
Sbjct: 126 LGFGDQFLLEAFSIAFTGDKKYVVK--------------IKESYSVCTDIGELAESLAEQ 171
Query: 416 GVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS 475
G L + S G P+ MLA+ K E+ + + E KYDGER QIH ++G
Sbjct: 172 GPKALGH-FSIKLGRPVRSMLAQRVKTFEELEERIPGKK-AAEEKYDGERVQIH--KNGE 227
Query: 476 -VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY------DREKQKILPFQ 528
++ +SR E T ++PDV+ AV K + VLD EI+AY + + FQ
Sbjct: 228 EIKAFSRRLEDITAQYPDVIEAVR--KGILAKKIVLDGEIIAYVEGGKANDSTGEFYSFQ 285
Query: 529 TLSTRARKNVSLSDIKV-DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
L R RK ++ V ++ FDILY G LL++ RR L + +E
Sbjct: 286 RLMKRRRKYEVQKYTEICPVAVFFFDILYLEGNSLLKKPYPERRAILEEHVKESE-ILHL 344
Query: 588 ATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGD 647
A + + +L+EI+ F + A++ EG+IIK+M R++ YE KRS WLK K++Y + +
Sbjct: 345 ARRIVTDNLEEIEDFFNEALEKRLEGIIIKSMGRNSAYEAGKRSWFWLKWKEEYASGMRE 404
Query: 648 SLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSK 707
+ DL I ++GRGKR G +GA L A + + F++ K+GTGF+EA +E S L
Sbjct: 405 TFDLAIIGKYYGRGKRKGSFGALLCAILNGEEQRFETFTKVGTGFTEADAKEIDSLLSEH 464
Query: 708 VIPKPRPYYRFADTISPDVWFEPTERPETSNSPASIVYDSQITCLPS 754
+I + + PD++ EP+ E V S+IT PS
Sbjct: 465 IISEVPKNVLIKSRMLPDIFVEPSLVIE--------VLGSEITESPS 503
>gi|357620386|gb|EHJ72598.1| hypothetical protein KGM_01327 [Danaus plexippus]
Length = 286
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 143/205 (69%), Gaps = 1/205 (0%)
Query: 528 QTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
+ LSTR RK+ S IKV VC++ FD+LY NG+ L++E L RRE L F E G +QF
Sbjct: 5 EVLSTRKRKDASEDQIKVQVCVFVFDLLYLNGEALVREDLEKRRELLRQHFNEVEGEWQF 64
Query: 588 ATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM-DRDATYEPSKRSLNWLKLKKDYIESIG 646
A + D +E+ +FL +V ASCEGL++K + +A Y+ ++RS NWLKLKKDY+E +G
Sbjct: 65 AVSRDCTDEEEVAQFLQESVKASCEGLMVKALRGENARYDIARRSHNWLKLKKDYLEGVG 124
Query: 647 DSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRS 706
DS+D V I A+HGRGKRTGVYG FLLACYD +E++QS+CKIGTGFS+ L S +L
Sbjct: 125 DSVDAVVIGAYHGRGKRTGVYGGFLLACYDPAHEQYQSLCKIGTGFSDEDLRTLSDTLAE 184
Query: 707 KVIPKPRPYYRFADTISPDVWFEPT 731
V+ PR YY F + SPDVWF P+
Sbjct: 185 HVVDGPRSYYLFDSSHSPDVWFSPS 209
>gi|308163234|gb|EFO65590.1| DNA ligase [Giardia lamblia P15]
Length = 810
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 209/383 (54%), Gaps = 43/383 (11%)
Query: 394 IVKQVFSVLPVYEKIVPALLT---------------DGVWNLSNTCSFTPGIPIGPMLAK 438
++ + +S P +E I+ ++T +GV N+ + PG+P+ MLA+
Sbjct: 366 VISKAYSSCPSFEAILNQIITHCGEGTEINKGQTGIEGVLAALNSMTIKPGVPVLSMLAR 425
Query: 439 PTKGVSEIVNKFQ-DMEFTCEYKYDGERAQIHY---LEDGSVEIYSRNAERNTGKFPDV- 493
PT SEI+ + + F+ EYKYDG RAQ+HY ++I+SR+ E + +FPDV
Sbjct: 426 PTTSYSEIIQRISCERSFSAEYKYDGFRAQVHYDARALTNKIQIFSRSLENMSKRFPDVS 485
Query: 494 -----------VLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR------- 535
+ A +++ +FV+D EI E ILPFQ LS R +
Sbjct: 486 ESVMNSFKESKLFAEMTIEERENANFVIDGEICPIHAETGLILPFQYLSRREKDILKAQK 545
Query: 536 --KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
K + S + ++ +YAFDIL+ N + L L R+E LY +F P F+FA +T
Sbjct: 546 DAKQMKESKNRTEIVMYAFDILFLNSRDYLSVDLADRKEALYCAFAVLPRKFEFARAVTC 605
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTM-DRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
+++ L+ AV EGLI+K + RD+ Y P +RS WLKLKKDY+E +GDS DLV
Sbjct: 606 TQDTNLKELLEEAVQNKTEGLIVKILRSRDSWYRPDERSHAWLKLKKDYLEDVGDSFDLV 665
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE-RSSSLRSKVIPK 711
P+AA+ G GKRTGV GA+LLA ++ ++++++C++GTGFS+A L S ++ + K
Sbjct: 666 PVAAWMGTGKRTGVLGAYLLASFNEECDQWETVCQLGTGFSDADLAAFHDSFIKCGMKEK 725
Query: 712 PRPYYRFADTISPDVWFEPTERP 734
P D PD+WF+P P
Sbjct: 726 PVSIEARLDK-EPDLWFDPETSP 747
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 18/251 (7%)
Query: 127 IDNPIDSEKESQPTPPSPKKRKV---NVNSVSAKEKI---AELKSNIVLLKKKAGEFDPK 180
ID + S+ +S PP K+ +V S + K + + + +N V+ G
Sbjct: 5 IDAFLQSKNQSNGEPPLKVKKVAFSSSVTSTTVKTDLGPSSRINTNNVVTGNDQG----- 59
Query: 181 MVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAAN 240
EK PF LS + I + T R+ + ML + + +D+VP V L+ N
Sbjct: 60 ----IEKNISFPFASLSAAWRRIEDTTKRLEKGREMVQMLLQIYLESTKDIVPAVLLSTN 115
Query: 241 KIAPAHEGL--ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMR 298
++ L L + S+ K +++ G ++K ++ GD+G+VA+ + SQS
Sbjct: 116 QLREPWSDLPSVLNFAEISLRKVISKTFGSDPVTIQKLLEKHGDIGVVAEKVKKSQSTTF 175
Query: 299 KP-DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIG 357
P PL ++ V+ IA +G S + K I LL T + +Y+ RL+ K R+G
Sbjct: 176 APRKPLNVSDVYQKLLQIADTSGASSMDDKSTIISNLLYNGTALDTRYISRLIAGKFRLG 235
Query: 358 LAEQTLLAALG 368
L +++++ L
Sbjct: 236 LQKKSIVPTLA 246
>gi|124027312|ref|YP_001012632.1| ATP-dependent DNA ligase [Hyperthermus butylicus DSM 5456]
gi|224487885|sp|A2BJX6.1|DNLI_HYPBU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|123978006|gb|ABM80287.1| ATP-dependent DNA ligase [Hyperthermus butylicus DSM 5456]
Length = 608
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 183/561 (32%), Positives = 293/561 (52%), Gaps = 49/561 (8%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+PF L+ F+ + T R T ++ ++ +T PE + VVY K+ P +GL
Sbjct: 3 MPFSVLAETFEKLERVTAR---TQMLLYLVELFKKTPPEIIDKVVYFIQGKLWPDWKGLP 59
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLG----LVAKASRSSQ------SMMRK 299
ELGIG+ +IKA + A +E +++ +++GD G ++ + + Q + M+K
Sbjct: 60 ELGIGEKMLIKAASIALHVSEKQIEQLVKKLGDTGKAIEMIKREKQQKQKAVGLLAFMQK 119
Query: 300 PD----PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
P LT+ KV+DT IA G+ S++ K + LL A+ E +Y+ R ++ +LR
Sbjct: 120 PSGGESTLTVEKVYDTLARIALVQGEGSRDIKLKLLAGLLAEASPREAKYIARFVEGRLR 179
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTD 415
+G+ + T++ AL A VY + ++S +E A + + V + L T
Sbjct: 180 LGVGDATIMEAL--AVVYGGSAA-----MRSVVERAYNLRADLGMVAKI-------LATQ 225
Query: 416 GVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS 475
G+ L N G+PI PMLA+ EI+ K EYKYDGERAQIH D
Sbjct: 226 GIDALKNIKPEV-GVPIRPMLAERLNDPVEIIKKLGGRAL-VEYKYDGERAQIHKKGD-K 282
Query: 476 VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRS--FVLDCEIVAYDREKQKILPFQTLSTR 533
+ I+SR E T +PDVV + K +++ +++ EIVA D E + PFQ L R
Sbjct: 283 IWIFSRRLENITHMYPDVV----EMAKKGIKAEEAIVEGEIVAIDPETGEFRPFQVLMHR 338
Query: 534 ARK---NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
RK + LS+I V ++ FD LY NG+ L + L R E L + E+ ++ A
Sbjct: 339 RRKKDVHAVLSEIPV--AVFLFDTLYVNGEDLTLKPLPARHEVL-EKIIEQSDTWRIAEG 395
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLD 650
+ + D E++ F A++ EG++ K + + Y+ R W+K K+DY + D++D
Sbjct: 396 IVTSDPQELESFFLKAIEDGAEGVMAKAIHDRSIYQAGARGWLWIKYKRDYKSEMSDTVD 455
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP 710
LV I AF+G+G+R G +GA L+A YD + + F+S+CK+G+GF++ LE L+ +
Sbjct: 456 LVVIGAFYGKGRRGGKFGALLMAAYDPDTDTFKSVCKVGSGFTDEDLERLDDMLKPYISD 515
Query: 711 KPRPYYRFADTISPDVWFEPT 731
K +P R + PDVW EPT
Sbjct: 516 K-KP-ARVDSQMKPDVWVEPT 534
>gi|15606583|ref|NP_213963.1| ATP-dependent DNA ligase [Aquifex aeolicus VF5]
gi|2983805|gb|AAC07362.1| DNA ligase (ATP dependent) [Aquifex aeolicus VF5]
Length = 585
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 272/540 (50%), Gaps = 36/540 (6%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ ++ I T RI ++V +++ +T E + VVYL+ KIAP + GL+ G+
Sbjct: 7 LAEFYERIEKTTSRI---EMVSSLVELFKQTPKELIDKVVYLSIGKIAPEYTGLDYNFGE 63
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD-PLTITKVFDTFRL 314
I+AL+ ++K+ ++ GDLG + + + + KP+ LT+ +V++
Sbjct: 64 KLAIRALSRVLKIPALEIEKRVRQEGDLGEAGR--KLYEELGFKPEGTLTVEEVYNGLLN 121
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA---A 371
IAK G SQE+K + +LL AT E +YL+R + +LR+G+ + T+L AL A +
Sbjct: 122 IAKAVGIGSQERKISIFASLLKKATPLEAKYLLRTITERLRLGIGDNTILEALSIAFTGS 181
Query: 372 VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIP 431
N + + N+ S L AKI+ + G+ + G P
Sbjct: 182 SVNREVVERAYNLTSDLGYVAKILAE-----------------KGLEGVKQ-VKIQVGRP 223
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFP 491
+ PMLA+ I+ K + EYKYDGER Q H D ++SR E T ++P
Sbjct: 224 VRPMLAERMSSPILILRKLGG-KCGAEYKYDGERIQAHRKGD-EFYLFSRRLENITHQYP 281
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI-KVDVCIY 550
D++ LK+ F+++ E V D +I PFQ L R K V+ I K V +
Sbjct: 282 DLI---EFLKEAIPHDFIVELEAVVIDPASGEIRPFQELMHRKVKYVTKYHITKYPVAGF 338
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
FDI+Y +G+ L + RRE L + + ++++++ F A++
Sbjct: 339 LFDIIYLDGEDLTLKPYPERREILEKVVKRTDRIGLVPRKIVD-NVEDLENFFYQAIEEG 397
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
CEGL+ K++ ++ Y+ KR W+K K+DY + D+LDLV + F+G+G+R G +G+
Sbjct: 398 CEGLVCKSLAPNSIYQAGKRGFLWIKYKRDYKSVLADTLDLVVVGGFYGKGQRKGTFGSL 457
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
L+ACYD ++ F+++ K+GTGF+E ++ L + + P R + D+WFEP
Sbjct: 458 LMACYDPESDMFKTVTKVGTGFTEDDFKKLEEILMPRKLNHRHP--RVNSILEADMWFEP 515
>gi|14423667|sp|O67398.2|DNLI_AQUAE RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
Length = 584
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 272/540 (50%), Gaps = 36/540 (6%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ ++ I T RI ++V +++ +T E + VVYL+ KIAP + GL+ G+
Sbjct: 6 LAEFYERIEKTTSRI---EMVSSLVELFKQTPKELIDKVVYLSIGKIAPEYTGLDYNFGE 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD-PLTITKVFDTFRL 314
I+AL+ ++K+ ++ GDLG + + + + KP+ LT+ +V++
Sbjct: 63 KLAIRALSRVLKIPALEIEKRVRQEGDLGEAGR--KLYEELGFKPEGTLTVEEVYNGLLN 120
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA---A 371
IAK G SQE+K + +LL AT E +YL+R + +LR+G+ + T+L AL A +
Sbjct: 121 IAKAVGIGSQERKISIFASLLKKATPLEAKYLLRTITERLRLGIGDNTILEALSIAFTGS 180
Query: 372 VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIP 431
N + + N+ S L AKI+ + G+ + G P
Sbjct: 181 SVNREVVERAYNLTSDLGYVAKILAE-----------------KGLEGVKQ-VKIQVGRP 222
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFP 491
+ PMLA+ I+ K + EYKYDGER Q H D ++SR E T ++P
Sbjct: 223 VRPMLAERMSSPILILRKLGG-KCGAEYKYDGERIQAHRKGD-EFYLFSRRLENITHQYP 280
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI-KVDVCIY 550
D++ LK+ F+++ E V D +I PFQ L R K V+ I K V +
Sbjct: 281 DLI---EFLKEAIPHDFIVELEAVVIDPASGEIRPFQELMHRKVKYVTKYHITKYPVAGF 337
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
FDI+Y +G+ L + RRE L + + ++++++ F A++
Sbjct: 338 LFDIIYLDGEDLTLKPYPERREILEKVVKRTDRIGLVPRKIVD-NVEDLENFFYQAIEEG 396
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
CEGL+ K++ ++ Y+ KR W+K K+DY + D+LDLV + F+G+G+R G +G+
Sbjct: 397 CEGLVCKSLAPNSIYQAGKRGFLWIKYKRDYKSVLADTLDLVVVGGFYGKGQRKGTFGSL 456
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
L+ACYD ++ F+++ K+GTGF+E ++ L + + P R + D+WFEP
Sbjct: 457 LMACYDPESDMFKTVTKVGTGFTEDDFKKLEEILMPRKLNHRHP--RVNSILEADMWFEP 514
>gi|343425565|emb|CBQ69100.1| related to DNA ligase I [Sporisorium reilianum SRZ2]
Length = 1064
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 176/619 (28%), Positives = 284/619 (45%), Gaps = 137/619 (22%)
Query: 142 PSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMV--ACW-----EKGERVP-- 192
P+P R V++ ++ A + L ++ + FDP V + W + G VP
Sbjct: 162 PTPTYRPVDLAALDASIQAIPLGDDVFV-------FDPWAVDTSSWPTISDKDGNLVPTT 214
Query: 193 -FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLEL 251
+ L+ F +I+ R+ IT ++ N+LRTV P+ L+P VYL +N IAP ++G+EL
Sbjct: 215 PYALLTHAFVLITATRSRLAITTLLTNLLRTVRAHDPDSLLPTVYLVSNHIAPPYDGVEL 274
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDT 311
G+G + I KA+ G++ +K+ + + GD G VA ++ + +P P+T+ ++F
Sbjct: 275 GLGGSIINKAIKSVTGKSARFMKQVWDKTGDPGDVAYEAKKDVKALVRPAPITVQRLFAN 334
Query: 312 FRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAA 371
IA+ +G+ S +K + LLVA+ E ++L+R S LRI T+ +L +A
Sbjct: 335 LHSIARLSGQGSANQKLGYVTKLLVASRGEETRFLVRTFISHLRIQAVRTTIATSLARAF 394
Query: 372 VYNEQHSKP-PPNIQSPLEEAA-------------------------------------- 392
E+ + P P+ Q E AA
Sbjct: 395 ALVEERAAPVEPSNQKEKERAALLLVHPHERKGILANAVKPKERQDPHRLALMERLARTE 454
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
K+V++V + P + IVP+LL G+ LS G PI PML T+ + + +K
Sbjct: 455 KLVREVRARHPNFGVIVPSLLQHGLAGLSEHVPLRIGTPISPMLGSITRSLGAMHDKLGP 514
Query: 453 MEFTCEYKYDGERAQIHYL--------------EDGS--------------VEIYSRNAE 484
F E+KYDG+R QIH + +DG V ++SR+ E
Sbjct: 515 RAFVSEFKYDGQRCQIHAIYVPRSAGAEARRSVKDGDAKCGKWAGKEGEVYVRLFSRHLE 574
Query: 485 RNTGKFPDVV------------------------LAVSRLKKPS---------------- 504
T K+PD+V + SR K +
Sbjct: 575 EMTEKYPDIVDMVPILMGQESEADANIGGSAFTEASTSRSKTTTEADESVKTEGIAADEP 634
Query: 505 ------VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRN 558
+ SF++D E+VA D E ++LPFQTL+ R+RK+VSL DIKV V ++AFD++Y +
Sbjct: 635 LRERQPITSFIMDAEVVAMDLEG-RLLPFQTLANRSRKDVSLHDIKVKVGVFAFDLMYLD 693
Query: 559 GQPLLQEQLRVRREHLYDSF----EEEPGFFQFAT--TLTSIDLDEIQKFLDAAVDASCE 612
G+ LL+ R RR L+ F + P +FA + S D DE+ +F A + CE
Sbjct: 694 GESLLKSSFRTRRHLLHSRFPALSPQNPLIARFAHVRSCESTDADEVARFFAQAQEYKCE 753
Query: 613 GLIIKTMDRDATYEPSKRS 631
G+++K++D P +
Sbjct: 754 GIMVKSLDHHWEASPDAKG 772
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 9/119 (7%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+TYEP KR +WLK+KKDY++ +GDSLDLVPI A+HG G++ + LLA YD
Sbjct: 852 STYEPDKRCESWLKVKKDYVDGLGDSLDLVPIGAWHGMGRKASWWSPMLLALYDPTTGVL 911
Query: 683 QSICKIGTGFSEAMLE-------ERSSSLRSKVIPKPRPYYRFADTIS--PDVWFEPTE 732
Q++CK +GF++A + E S++ + +P P+ +T S PDVW++P E
Sbjct: 912 QAVCKCISGFTDAFYKDLNVRYAEGSATCVTARYGEPSPFGMELETGSLWPDVWWKPGE 970
>gi|253744801|gb|EET00951.1| DNA ligase [Giardia intestinalis ATCC 50581]
Length = 790
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 203/379 (53%), Gaps = 43/379 (11%)
Query: 394 IVKQVFSVLPVYEKIVPALLT---------------DGVWNLSNTCSFTPGIPIGPMLAK 438
+V + +S P +E I+ ++T DGV N+ + PG+P+ MLA+
Sbjct: 344 VVSKAYSSCPSFEVILNQIITHCGEGSENDKKQTNVDGVLAALNSMTIRPGVPVLSMLAR 403
Query: 439 PTKGVSEIVNKFQ-DMEFTCEYKYDGERAQIHYLEDGS---VEIYSRNAERNTGKFPDV- 493
PT EI+ + + F+ EYKYDG RAQ+HY S ++I+SR+ E + +FPDV
Sbjct: 404 PTTSYDEIIQRVSCEQSFSAEYKYDGFRAQVHYDARASTNKIQIFSRSLENMSKRFPDVS 463
Query: 494 -----------VLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR------- 535
+ A ++ FV+D EI + + +LPFQ LS R +
Sbjct: 464 DSVLESFKSSALFAEMTAEEKKCAGFVIDGEICPINTDTGLVLPFQYLSRREKDILKAQR 523
Query: 536 --KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
K + + + +YAFDIL+ N L L R++ LY +F P F+FA +T
Sbjct: 524 DAKQEKETKTRTSIVMYAFDILFLNSNDYLSVDLADRKKALYHAFASLPRRFEFARAVTC 583
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTM-DRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
+++ L+ AV EGLI+K + RD+ Y P +RS WLKLKKDY+ +GDS DLV
Sbjct: 584 TQHTNLKELLEEAVQNKTEGLIVKILRSRDSWYRPDERSHAWLKLKKDYLNDVGDSFDLV 643
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE-RSSSLRSKVIPK 711
P+AA+ G GKRTGV GA+LLA ++ ++++++C++GTGFS+A L S ++ + K
Sbjct: 644 PVAAWMGTGKRTGVLGAYLLASFNEECDQWETVCQLGTGFSDADLAAFHESFVKCGMHDK 703
Query: 712 PRPYYRFADTISPDVWFEP 730
P D PD+WF+P
Sbjct: 704 PASIEAHLDK-EPDMWFDP 721
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
Query: 187 KGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAH 246
K PF+ LS + I + T R+ + + ML + + +D+VP V L+ N++
Sbjct: 59 KDSSFPFMSLSTAWKRIEDTTKRLEKSREMVQMLLQIYLESTKDIVPAVLLSTNQLREPW 118
Query: 247 EGL--ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP-DPL 303
L L + S+ K ++ G S ++K ++ GD+G+VA+ + SQS P PL
Sbjct: 119 SDLPSVLNFAELSLRKVISRTFGSDISTIQKLIEKHGDIGVVAEKVKKSQSATFAPRKPL 178
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
I V++ IA +G S + K I LL T + +Y+ RL+ K R+G+ ++++
Sbjct: 179 NIADVYNKLLQIADTSGASSMDDKSTIISDLLYNGTALDTRYISRLIAGKFRLGIQKKSI 238
Query: 364 LAALG 368
+A L
Sbjct: 239 IANLA 243
>gi|71021171|ref|XP_760816.1| hypothetical protein UM04669.1 [Ustilago maydis 521]
gi|46100293|gb|EAK85526.1| hypothetical protein UM04669.1 [Ustilago maydis 521]
Length = 1068
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 156/563 (27%), Positives = 248/563 (44%), Gaps = 125/563 (22%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
P+ L+ F +I+ R+ IT ++ N+LRTV PE L+ VYL +N IAP ++G+E
Sbjct: 218 TPYALLTHAFVLITATRSRLAITSVLTNLLRTVRAHDPESLLATVYLVSNHIAPPYDGVE 277
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
LG+G + I KA+ G++ +K+ + GD G VA ++ + +P P+T+ ++F
Sbjct: 278 LGLGGSIINKAIKSVTGKSARFMKQVWDRTGDPGDVAYEAKKDVKALVRPAPITVQRLFS 337
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
IA+ +G S +K + LLVA+ E ++L+R S LRI T+ AL +
Sbjct: 338 NLHSIARLSGAGSANQKLGYVTKLLVASRGEETRFLVRTFISHLRIQAVRTTIATALART 397
Query: 371 AVYNEQHSK--PPPN-------------------------------------IQSPLEEA 391
E+ + P N + L A
Sbjct: 398 FALVEERATLVEPSNAKEKERASLLLVHPNERRGLLANAVKPKERQDAQRLALMERLTRA 457
Query: 392 AKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ 451
K+V++V + P + IVP+LL G+ LS G PI PML T+ + + K
Sbjct: 458 EKLVREVRARHPNFGVIVPSLLEHGLAGLSEHVPLRIGTPISPMLGSITRSLGAMHEKLG 517
Query: 452 DMEFTCEYKYDGERAQIHY--------------LEDGS---------------VEIYSRN 482
F E+KYDG+R QIH ++DG V ++SR+
Sbjct: 518 PRAFVSEFKYDGQRCQIHAIYVPRSAGLEARKSIKDGDATKCGKWVGKNGEIYVRLFSRH 577
Query: 483 AERNTGKFPDVVLAVSRL------------------------------------------ 500
E T K+PD+ V L
Sbjct: 578 LEEMTEKYPDITDMVPILMGQESESDANIGGSAFIDTSSCPSKQRLQDATEAEVGVKAQQ 637
Query: 501 --------KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAF 552
+ ++ SF++D E+VA D E ++LPFQTL+ R+RK+V+L DIKV V ++AF
Sbjct: 638 AGAQKAQGRGQAITSFIMDAEVVAMDLEG-RLLPFQTLANRSRKDVNLHDIKVKVGVFAF 696
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSF------EEEPGFFQFATTLTSIDLDEIQKFLDAA 606
D++Y +G+ LL+ R RR L+ F F + S D DE+ +F A
Sbjct: 697 DLMYLDGESLLKSSFRTRRRLLHSRFLALFAQSALIARFAHVRSCESTDADEVARFFAQA 756
Query: 607 VDASCEGLIIKTMDRDATYEPSK 629
+ CEG+++K++D P++
Sbjct: 757 QEYKCEGIMVKSLDHHWEAPPTR 779
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 76/130 (58%), Gaps = 9/130 (6%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+TYEP KR +WLK+KKDY++ +GDSLDLVPI A+HG G++ + LLA YD +
Sbjct: 853 STYEPDKRCESWLKVKKDYVDGLGDSLDLVPIGAWHGMGRKATWWSPMLLALYDPSRGVL 912
Query: 683 QSICKIGTGFSEAMLE-------ERSSSLRSKVIPKPRPYYRFADTIS--PDVWFEPTER 733
Q++CK +GF++A + E S + K P+ +T S PDVW++P+E
Sbjct: 913 QAVCKCISGFTDAFYKELNVRYAEGSETCVRAEYGKGSPFGIELETGSLWPDVWWKPSEV 972
Query: 734 PETSNSPASI 743
E + +I
Sbjct: 973 WEIRGADVTI 982
>gi|379335286|gb|AFD03270.1| ATP-dependent DNA ligase, partial [uncultured archaeon W4-93a]
Length = 467
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/496 (32%), Positives = 269/496 (54%), Gaps = 35/496 (7%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+ F L+ F + + T R+ +T I+ ++ + T+PE + +VYL K+ P +EG+E
Sbjct: 1 MEFAVLADAFKKMEDTTKRLELTQILVDLFKV---TSPELIPKIVYLIQGKLRPDYEGVE 57
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKV 308
LG+ + IKA++++ ++++Y++ GDLG A + +Q+ D +T+ +V
Sbjct: 58 LGVAEKLAIKAISKSSAIPIKKIEEEYRKGGDLGHAASIILEQKAQTTFVVED-ITVERV 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
++T IAK G SQ+ K I +LL A E ++++++L LR+G+AE T++ AL
Sbjct: 117 YETLFKIAKLEGARSQDMKMKYISSLLNDANPLEARFILKILLGTLRLGIAENTVMDALA 176
Query: 369 QAAV---YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCS 425
A N + + N+ S L AK++ + +G+ +
Sbjct: 177 TAYTGTKENRESLEKAYNVSSDLGMVAKVIAK-----------------EGLQGV-KAFQ 218
Query: 426 FTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAER 485
T P+ PMLA K E + K D +F EYK DGERAQ+H +++G V+++SR+ E
Sbjct: 219 ITVFKPVRPMLADRVKSEKESIEKMGD-KFAAEYKLDGERAQLH-MKNGEVKLFSRSLEN 276
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIK 544
T +PD+V + + K + +++ E+VA + E + LPFQ L R RK + + +
Sbjct: 277 ITSYYPDIVEKIPQSLKST--ELIVEAEVVAINEESGEFLPFQELMHRRRKYKIEKAVSE 334
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + FDI+Y +G+ L + RRE L + E F + + +EI++FL+
Sbjct: 335 YPITVNFFDIMYADGKSWLDVEYEKRREIL-EKIVIENDFVKLVPMTIIQNENEIEEFLE 393
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
+++A CEGL++K + +A Y+ R NWLKLK++Y +GDSLDLV I AF GRG+RT
Sbjct: 394 NSINAGCEGLMLKML--NAPYKAGSRGSNWLKLKREYRNELGDSLDLVVIGAFFGRGRRT 451
Query: 665 GVYGAFLLACYDSNNE 680
G YG LLA YD +
Sbjct: 452 GRYGTLLLAAYDDGTD 467
>gi|159108260|ref|XP_001704402.1| DNA ligase [Giardia lamblia ATCC 50803]
gi|157432464|gb|EDO76728.1| DNA ligase [Giardia lamblia ATCC 50803]
Length = 810
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/379 (34%), Positives = 205/379 (54%), Gaps = 43/379 (11%)
Query: 394 IVKQVFSVLPVYEKIVPALLT---------------DGVWNLSNTCSFTPGIPIGPMLAK 438
++ + +S P +E I+ ++ +GV + + PG+P+ MLA+
Sbjct: 366 VISKAYSSCPSFEVILNQIIAHCGEGSERNKNQTNIEGVLAALYSMTIKPGVPVLSMLAR 425
Query: 439 PTKGVSEIVNKFQ-DMEFTCEYKYDGERAQIHYLEDGS---VEIYSRNAERNTGKFPDV- 493
PT EI+ + + F+ EYKYDG RAQ+HY S ++I+SR+ E + +FPDV
Sbjct: 426 PTTSYGEIIQRISCEQSFSAEYKYDGFRAQVHYDARASTNKIQIFSRSLENMSKRFPDVS 485
Query: 494 -----------VLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR------- 535
+ A +++ +FV+D EI + + +LPFQ LS R +
Sbjct: 486 ESVMNSFQESKLFAGMTVEERENANFVIDGEICPINADTGLVLPFQYLSRREKDILKAQK 545
Query: 536 --KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
K V + ++ +YAFDIL+ N + L L R+E LY +F P F+FA +T
Sbjct: 546 DAKQVKEVKTRTEIVMYAFDILFLNSRDYLSVDLADRKEALYYAFAVLPRRFEFARAVTC 605
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTM-DRDATYEPSKRSLNWLKLKKDYIESIGDSLDLV 652
++ L+ AV EGLI+K + RD+ Y P +RS WLKLKKDY+E +GDS DLV
Sbjct: 606 TQDTNLKDLLEEAVQNKTEGLIVKILRSRDSWYRPDERSHAWLKLKKDYLEDVGDSFDLV 665
Query: 653 PIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE-RSSSLRSKVIPK 711
P+AA+ G GKRTGV GA+LLA ++ ++++++C++GTGFS+A L S ++ + K
Sbjct: 666 PVAAWMGTGKRTGVLGAYLLASFNEECDQWETVCQLGTGFSDADLAVFHDSFVKCGMKEK 725
Query: 712 PRPYYRFADTISPDVWFEP 730
P D PD+WF+P
Sbjct: 726 PASIEARLDK-EPDMWFDP 743
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 93/186 (50%), Gaps = 3/186 (1%)
Query: 186 EKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPA 245
EK PF LS + I + T R+ + + ML + + +D+VP V L+ N++
Sbjct: 61 EKDISFPFASLSAAWKRIEDTTKRLEKSREMVQMLLQIYLESTKDIVPAVLLSTNQLREP 120
Query: 246 HEGL--ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD-P 302
L L + S+ K +++ G + ++K ++ GD+G VA+ + SQS P P
Sbjct: 121 WSDLPSVLNFAEISLRKVISKTFGSDPTTIQKLIEKHGDIGAVAEKVKKSQSATFAPRRP 180
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
L ++ V+ IA +G S + K I LL T + +Y+ RL+ K R+G+ +++
Sbjct: 181 LNVSDVYQKLLQIADTSGASSMDDKSTIISNLLYNGTTLDTRYISRLIAGKFRLGIQKKS 240
Query: 363 LLAALG 368
+++ L
Sbjct: 241 IVSTLA 246
>gi|313679806|ref|YP_004057545.1| DNA ligase i, ATP-dependent dnl1 [Oceanithermus profundus DSM
14977]
gi|313152521|gb|ADR36372.1| DNA ligase I, ATP-dependent Dnl1 [Oceanithermus profundus DSM
14977]
Length = 571
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 164/539 (30%), Positives = 268/539 (49%), Gaps = 51/539 (9%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
+ + RI + ++ R E PE++ V L ++AP EGLE G+ + KAL
Sbjct: 13 VERASSRIAMVKMLAEAFR---ELPPEEVPLAVLLLQGRVAPEFEGLEFGVAEKEAAKAL 69
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKD 322
A A GR E+ + +E GD+G A + + R+ L++ V+ R IA++AG
Sbjct: 70 ALALGRDEAETVQAVKEKGDIGAYA-----LEVLPRRAGGLSLRHVYGELRAIAEDAGPG 124
Query: 323 SQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP 382
SQ +K+ R+ L+ A+ E ++R + +LR+G+ + T+L AL A ++ KP
Sbjct: 125 SQARKRERLSRLVAEASPEEAAVILRTVTGRLRLGVGDATVLEALA-LAFLGDRAKKPL- 182
Query: 383 NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKG 442
LE A + + V L +G L G P+ MLA+ G
Sbjct: 183 -----LERAYNLTSDL--------AYVARLALEGEEALRQ-VKLEVGKPVRMMLAERLPG 228
Query: 443 VSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLK 501
+I+ K E+KYDGER Q+H+ DG +YSR E T ++PD++ A+ ++
Sbjct: 229 PEQIMEKLGP--HFAEHKYDGERVQVHF--DGERFWVYSRRLENITHQYPDLLEALREVQ 284
Query: 502 KPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI-KVDVCIYAFDILYRNGQ 560
F+L+ E V D ++ PFQ + R K+++ + K + + F++LY +G+
Sbjct: 285 HGP---FILEAEAVVTDPVTGEMRPFQNVLNRKVKHLTPELLEKYPIKGFVFELLYADGE 341
Query: 561 PLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD 620
L++ RRE L F + +T +E+ +F DA+++A CEGL+ K D
Sbjct: 342 VLIERPYSERRERLERWFRPHERL-ELSTKRFVETTEELVQFFDASIEAGCEGLVCKKPD 400
Query: 621 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNE 680
D YE KR W+K K+ + D+LDLV + A+ GRG+R G YG+ L A Y+ + +
Sbjct: 401 GD--YEAGKRGFKWVKYKRGIAGKLSDTLDLVIVGAWLGRGRRAGTYGSLLAAAYNPDED 458
Query: 681 EFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD-------TISPDVWFEPTE 732
F+++ K+G+GFS+ L E V+P+ YR + + PDVWFEP +
Sbjct: 459 RFETLTKVGSGFSDEDLNE--------VLPRRLDPYRRGERHPRVWSLLEPDVWFEPVQ 509
>gi|426197258|gb|EKV47185.1| hypothetical protein AGABI2DRAFT_69760 [Agaricus bisporus var.
bisporus H97]
Length = 737
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 261/522 (50%), Gaps = 72/522 (13%)
Query: 83 SSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQID-NPIDSEKESQPTP 141
++SP K R +TP TN GEKI PS + P+ +D +++ E + P
Sbjct: 32 TTSPGKIRATPLETPVETNH--GEKI------PS---LSPLVIDVDAEDAETQFEERLVP 80
Query: 142 P-----SPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFL 196
P S + +K VN KI L+ L + P EKG P+ FL
Sbjct: 81 PLAVLQSVRVQKKEVNIPGHSVKIQPLQ--FAPLDVDPINYSPDGQPWLEKG--APYAFL 136
Query: 197 SLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDA 256
+ F +S+ RI+I + + N L T++ PE L+P +YL +N +AP + +ELG+G A
Sbjct: 137 THAFSTLSSTRSRIIIINTLTNCLHTIISKHPESLLPSLYLLSNTLAPPYAPIELGLGPA 196
Query: 257 SIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIA 316
I +A+ G T + +KK Y +GD G VA A++++ + LTI+ V+D+ +IA
Sbjct: 197 IISRAIQNVSGITPATLKKLYNTLGDPGDVAVAAKTNLRTLVPHPQLTISYVYDSLMMIA 256
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
G+ + +K+ I+ LL++A E +Y+ R L LR+G ++L AL +A + +
Sbjct: 257 HSKGQGAARQKEKLIEKLLLSANGEEIRYMTRTLCQNLRVGAVRTSMLTALARAIALSYE 316
Query: 377 H-------------------------------SKPPPN-IQSPLEEAAKIVKQVFSVLPV 404
S P N + +A IVK VF P
Sbjct: 317 SPGLLEGEDTLHVSASLLRKLQKSPVKNKAGLSDCPRNKLNEIFSKAESIVKGVFVKHPN 376
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y IV ALL G IP+ P L P + + E+ ++ + F E+KYDG+
Sbjct: 377 YGDIVAALLDTG-------------IPLHPTLGSPMRSLDEVYDRLANQPFVAEFKYDGQ 423
Query: 465 RAQIHYL-EDGSV---EIYSRNAERNTGKFPDVVLAVSRL--KKPSVRSFVLDCEIVAYD 518
RAQ+H + +DG + +I+SR+ E T K+PD+ L V L + PS+ SFV+D EIVA +
Sbjct: 424 RAQVHAITKDGRLSEFKIFSRHLEDMTSKYPDIQLLVKSLLERSPSISSFVMDAEIVAVN 483
Query: 519 REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQ 560
I FQ LS RA+K+V + DI+V VC+YAFD++Y NG+
Sbjct: 484 PRTGAIKTFQELSNRAKKDVQVRDIQVSVCLYAFDLMYLNGE 525
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
ATYEP KR+ WLKLKKDY+ +GDSLDLVP+ A++G G++ + L+A YD ++ F
Sbjct: 530 ATYEPDKRTAAWLKLKKDYVSGVGDSLDLVPVGAWYGNGRKVKWWSPILMAVYDQSSGRF 589
Query: 683 QSICKIGTGFSEAMLEERSSSLR----SKVIPKPRPYYRFA-DTISPDVWFEPTE 732
++CK +GF+++ ++ VI PRP + +PDV+F P E
Sbjct: 590 VAVCKCMSGFTDSFYQDTRDRYTPGDGPDVICSPRPLWECDFGGFTPDVYFRPQE 644
>gi|217967169|ref|YP_002352675.1| ATP-dependent DNA ligase I [Dictyoglomus turgidum DSM 6724]
gi|226738221|sp|B8DZX8.1|DNLI_DICTD RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|217336268|gb|ACK42061.1| DNA ligase I, ATP-dependent Dnl1 [Dictyoglomus turgidum DSM 6724]
Length = 582
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 275/544 (50%), Gaps = 49/544 (9%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ F+ I T R + +I+ ++ + V E++ ++YL ++AP +E +E G+ +
Sbjct: 6 LAQYFEKIEKTTKRNEMMEILADLFKRV---DKEEIEKIIYLLNGRVAPDYEKIEFGMSE 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLG-LVAKASRSSQSMMRKPDPLTITKVFDTFRL 314
+++A+A A ++K Y+E+GDLG L+ K S++ LT+ + F+T
Sbjct: 63 KLVLRAMALALKVPIFDLEKVYKEVGDLGELIIKYSQNEGK------DLTVVETFNTLFE 116
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
IA +G+ S + K NR+ L+ + T +YL+R++ KLR+G+ E T++ AL A V
Sbjct: 117 IANLSGEGSVDAKVNRLAFLINSLTPQGGKYLVRIVLGKLRLGVGEPTVMDALSFAKV-K 175
Query: 375 EQHSKP----PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
++ +P NI S L AK+ +E + AL G
Sbjct: 176 DKSLRPFIERAFNITSDLGYVAKV---------FWEGGIEAL---------KKIKVEVGK 217
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
PI LA+ V EIV + E K+DG R QIH E+ +V I+SRN E NT F
Sbjct: 218 PIRMALAERVSKVEEIVKRLGKC--AIEPKFDGFRCQIHKKEN-NVRIFSRNLEDNTHMF 274
Query: 491 PDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCI 549
PD+V AV LK+ S ++ +++ E ++Y+ E + PFQ R RK N+S + +
Sbjct: 275 PDLVEAV--LKQFSDKNVIIEGEAISYNPETGEFYPFQVTVQRKRKYNISEMVELYPLQL 332
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+AFDILY NG+ + RR+ L ++ E F +T+ D EIQ F + +
Sbjct: 333 FAFDILYLNGEDITSLPYIRRRQKLEEAISEGEKIFVTKNIITN-DPKEIQAFFEECITE 391
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT--GVY 667
EG++ K + DA Y+ R+ NW+KLK+ Y + D++D V + F GRG R G+
Sbjct: 392 GLEGIVAKRL--DAPYQAGIRNFNWIKLKRSYQGHLADTVDCVILGYFKGRGHRAKFGI- 448
Query: 668 GAFLLACYDSNNEEFQSICKIGTG-FSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
GA L+ YD + F+++ KIGTG E + R K+ KP I PDV
Sbjct: 449 GALLVGVYDDERDLFKTVAKIGTGPTEEEWVRFREVLDEIKLESKPN---NVESLIEPDV 505
Query: 727 WFEP 730
W EP
Sbjct: 506 WVEP 509
>gi|206901484|ref|YP_002250496.1| thermostable DNA ligase [Dictyoglomus thermophilum H-6-12]
gi|224487883|sp|B5YD88.1|DNLI_DICT6 RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|206740587|gb|ACI19645.1| thermostable DNA ligase [Dictyoglomus thermophilum H-6-12]
Length = 582
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 271/544 (49%), Gaps = 49/544 (9%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ F+ I T R + +I+ ++ R V E++ ++YL ++AP +E +E G+ D
Sbjct: 6 LAQYFERIEKTTKRNEMMEILADLFRKV---DKEEIDKIIYLLNGRVAPDYEKIEFGMSD 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLG-LVAKASRSSQSMMRKPDPLTITKVFDTFRL 314
+++A+A A +++ Y+E+GDLG LV K S++ LT+ + F+T
Sbjct: 63 KLVLRAMALALKIPLLELERSYKEVGDLGELVVKYSKNEGK------DLTVVETFNTLYD 116
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
IA +G+ S + K NR+ L+ + T +YL+R++ KLR+G+ E T++ AL A V
Sbjct: 117 IANLSGEGSVDAKVNRLAFLINSLTPQGGKYLVRIVLGKLRLGVGEPTIMDALSFAKV-K 175
Query: 375 EQHSKP----PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
++ +P NI S L AK+ +E V AL G
Sbjct: 176 DKGLRPFIERAFNITSDLGYVAKV---------FWEGGVEAL---------KRIKVQVGR 217
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
PI LA+ EI+ + E K+DG R QIH E+ SV I+SRN E NT F
Sbjct: 218 PIRMALAERVSRAEEIIKRLGKC--AVEPKFDGFRCQIHKKEN-SVRIFSRNLEDNTYMF 274
Query: 491 PDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCI 549
PD+V AV LK+ R +++ E ++Y+ E + PFQ R RK N+S + +
Sbjct: 275 PDLVEAV--LKQFPDRDVIIEGEAISYNPETGEFYPFQVTVQRKRKYNISEMVELYPLQL 332
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+AFDILY +G+ RR+ L ++ E + + D EIQ F + +
Sbjct: 333 FAFDILYLDGEDTTSLPYIRRRQKLEEALVEGEK-ISITKNIITNDPKEIQSFFEECITE 391
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT--GVY 667
EG++ K + DA Y+ R+ NW+KLK+ Y + D++D V + F GRG R G+
Sbjct: 392 GLEGIVAKRL--DAPYQAGMRNFNWIKLKRSYQGHLADTVDCVILGYFKGRGHRAKFGI- 448
Query: 668 GAFLLACYDSNNEEFQSICKIGTG-FSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
GA L+ YD + F++I KIGTG E ++ R KV +P F I PDV
Sbjct: 449 GALLVGVYDDERDLFKTIAKIGTGPTEEEWVKFREILDEIKVEKRPNNVESF---IEPDV 505
Query: 727 WFEP 730
W EP
Sbjct: 506 WVEP 509
>gi|315426247|dbj|BAJ47889.1| ATP-dependent DNA ligase, partial [Candidatus Caldiarchaeum
subterraneum]
Length = 471
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 162/504 (32%), Positives = 256/504 (50%), Gaps = 46/504 (9%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV-PVVYLAANKIAPAHEGLEL 251
F L+ ++ + T R+ +TDI+ +L TP D++ VVY+ +I PA+ GLEL
Sbjct: 3 FRELADFYERLEATTKRLEMTDILAELL----SKTPPDIIDKVVYMTLGEIYPAYRGLEL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRK-------PDPLT 304
G+ + ++ + + G E V + Y GD+G ++ ++RK LT
Sbjct: 59 GVAEKLALRVVKQVTGAHEKEVDEAYARHGDVG------NAAMVLLRKKPQTTLFAQELT 112
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ V+ F IA+ G + + K + + LL A+ E ++++R++ +R+G+A+ T+L
Sbjct: 113 VQDVYTAFEKIARSTGPGAVDVKMSILAGLLAQASPVEAKHILRMVTGNMRLGVADMTIL 172
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
AL +A + + N+ S + A LT
Sbjct: 173 DALAKAFGGEREVYERAYNLSSDIGLVA--------------------LTAAREGPEGVR 212
Query: 425 SFTP--GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
F GIP+ MLA+ EI+ K F EYKYDGER QIH +V I+SR
Sbjct: 213 RFRVRVGIPVRCMLAERLASAEEILEKVGGRGF-AEYKYDGERMQIHK-SGQTVVIFSRR 270
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLS 541
E T ++PDVV V+R S + +L+CE V D E + LPFQ L R RK + +
Sbjct: 271 QENITSQYPDVVEMVTR--GVSAKEAILECEAVPLDPETGETLPFQELMHRKRKKEIEKA 328
Query: 542 DIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
+ V +Y FDILY +G+ L + L +RR+ L + E + +T +E++K
Sbjct: 329 AEEYPVALYFFDILYVDGEDLTTQPLPIRRKRL-EEIVVESERMKLSTGRMVETPEEVEK 387
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
F AV+A CEGL+IK++D ++ Y R W+KLK+DY + D++DLV + AFHGRG
Sbjct: 388 FFAEAVEAGCEGLMIKSVDEESVYRAGARGWQWIKLKRDYRSEMIDTVDLVVVGAFHGRG 447
Query: 662 KRTGVYGAFLLACYDSNNEEFQSI 685
+R G YGA L+A Y+ + FQ++
Sbjct: 448 RRKGRYGALLMAVYNPEKDVFQTV 471
>gi|397779791|ref|YP_006544264.1| DNA ligase 1 [Methanoculleus bourgensis MS2]
gi|396938293|emb|CCJ35548.1| DNA ligase 1 [Methanoculleus bourgensis MS2]
Length = 582
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 262/548 (47%), Gaps = 42/548 (7%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F L+ F+ ++ + R D+ + R + +P+++ V Y IAP + GL G
Sbjct: 3 FATLASCFERLNVTSSR---NDMTALLARLLAGASPDEIGIVCYFTLGAIAPGYSGLTPG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTF 312
IG+ + A+A A + V+ +E+GD G A A + PL +T V F
Sbjct: 60 IGERTAAAAIALAGSVDPAAVEAAARELGDYGDAA-ARLTVAPPEGSTGPLRVTDVHRGF 118
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
IA+ +G S ++K + A+L AAT E +YL+RL ++R+G+ + TLL AL +A +
Sbjct: 119 MEIARASGPGSADRKTRVLAAMLAAATPPERRYLVRLATGEMRLGVGDMTLLDALAEAFL 178
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
+ +PP LE A I V +V L + + T PI
Sbjct: 179 -GSKAERPP------LEHAYNISSDV--------GLVARTLQESGLAGVSAIPVTLHHPI 223
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFP 491
PML + +SEI + E KYDGER Q H +DG V ++SR T ++P
Sbjct: 224 RPMLTQRVSRISEIPERIGSRVIAVEEKYDGERVQAH--KDGDDVTLFSRRLTDVTHQYP 281
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI-KVDVCIY 550
D+V + R + + +LD E VA+D E PFQTL R RK+ ++
Sbjct: 282 DIVRHIRRCV--TADTAILDGEAVAFDHETGTYRPFQTLMRRRRKHRVREVAGEIPATYR 339
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
FD+LY NG+ L+ RR L + + TLT DLD I +F A ++
Sbjct: 340 VFDLLYVNGESYLRRSYPDRRARLEEVLSPDEKISPADRTLTG-DLDGITEFYLACIERG 398
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
EG++ K+ D+ Y R W+K K DY + D+LDLV + A GRGKR G YG+
Sbjct: 399 LEGVVCKSCAEDSFYRAGAREWQWIKWKSDYGTELADTLDLVVVGANAGRGKRAGTYGSV 458
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEE---RSSSLR-----SKVIPKPRPYYRFADTI 722
L A Y+ + FQ++C +GTGF++A L + R + +R ++V+ P+
Sbjct: 459 LCAAYNHEEDIFQTVCGMGTGFTDADLADLPRRFAGVRVDRQPARVMVTPQAV------- 511
Query: 723 SPDVWFEP 730
PD WF P
Sbjct: 512 -PDFWFAP 518
>gi|443900400|dbj|GAC77726.1| hypothetical protein PANT_27d00090 [Pseudozyma antarctica T-34]
Length = 1004
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 161/528 (30%), Positives = 257/528 (48%), Gaps = 84/528 (15%)
Query: 177 FDPKMV--ACW-----EKGERVP---FIFLSLVFDMISNETGRILITDIVCNMLRTVMET 226
+DP V + W + GE +P + L+ F +IS R+ IT ++ N+LRTV
Sbjct: 179 YDPSAVDTSAWPHVAGKHGELIPTTPYALLTHAFVLISATRSRLAITTLLTNLLRTVRAH 238
Query: 227 TPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLV 286
P+ L+P VYL +N IAP ++G+ELG+G + + KA+ G++ +K+ + + GD G V
Sbjct: 239 DPDSLLPTVYLVSNHIAPPYDGVELGLGGSIVNKAIKSVTGKSARFLKQVWDKTGDPGDV 298
Query: 287 AKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYL 346
A ++ + +P P+T+ ++F IA+ +G S +K + LLVA+ E ++L
Sbjct: 299 AYEAKKDVKALVRPAPITVQRLFQNLHSIARLSGTGSANQKLGVVTKLLVASRGEETRFL 358
Query: 347 IRLLQSKLRIGLAEQTLLAALGQ--AAVYNEQHSKPPPN--------------------- 383
+R S LRI T+ AL + A V + PP N
Sbjct: 359 VRTFISHLRIQAVRTTIATALARTFALVEHSAALTPPSNDKERERANMLLVHPSERNGIL 418
Query: 384 ----------------IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
+ L A K+V++V + P + IVP+LL G+ LS
Sbjct: 419 ANATKPKERQDPQRLVLMERLARAEKLVREVRARHPNFGVIVPSLLRYGLAGLSEHVPLR 478
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIH-----------------Y 470
G PI PML T+ + + K F E+KYDG+R QIH +
Sbjct: 479 IGTPISPMLGSITRSLGAMHAKLGARAFVSEFKYDGQRCQIHAIYVPRSAGPEARRMGGH 538
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRL-----------KKPSVRSFVLDCEIVAYDR 519
G + SR+ E T K+PD+ V L ++ V SF++D E+VA D
Sbjct: 539 QRRGVRQAISRHLEEMTEKYPDITDMVPLLMGQQLEAEAAAEREKVTSFIMDAEVVAMDL 598
Query: 520 EKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF- 578
+ ++LPFQTL+ R+RK+V+L +IKV V ++AFD++Y +G LL+ R RR L+ F
Sbjct: 599 DG-RLLPFQTLANRSRKDVNLHEIKVKVGVFAFDLMYLDGDSLLKSSFRTRRRLLHTRFP 657
Query: 579 ---EEEPGFFQFATTLT--SIDLDEIQKFLDAAVDASCEGLIIKTMDR 621
+ P +FA + S D D++ +F A + CEG+++K++D
Sbjct: 658 PLSPQSPLIARFAHVRSCESTDADQVARFFAQAQEYKCEGIMVKSLDH 705
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+TYEP KR +WLK+KKDY++ +GDSLD+VPI A+HG G++ + LLA Y+
Sbjct: 796 STYEPDKRCESWLKVKKDYVDGLGDSLDVVPIGAWHGMGRKATWWSPMLLALYEPGTGVL 855
Query: 683 QSICKIGTGFSEAML--------EERSSSLRSKVI-PKPRPYYRFADTISPDVWFEPTER 733
Q++CK +GF++A E S +R++ P P Y + PDVW+ P+E
Sbjct: 856 QAVCKCISGFTDAFYKDLNVRYAEGSESCVRARYGEPPPFGYEVETGNLFPDVWWRPSEV 915
Query: 734 PETSNSPASI 743
E + ++
Sbjct: 916 WEIRGADVTV 925
>gi|452077113|gb|AGF93082.1| DNA ligase I, ATP-dependent Dnl1 [uncultured organism]
Length = 567
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 164/522 (31%), Positives = 259/522 (49%), Gaps = 41/522 (7%)
Query: 215 IVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVK 274
I+ +LR +T PE L V+ L +I PAH E GIG + KA+ A G E +
Sbjct: 25 IIAELLR---KTKPEQLEMVIPLLLGRIYPAHASEETGIGLQQLKKAVGRATGYQEKEID 81
Query: 275 KQYQEMGDLGLVA-KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKA 333
KQ +E+GDLG A K ++ + M+ LT +KVF+ R + + G+ S ++K +
Sbjct: 82 KQMEELGDLGKTAEKLTKKRKQMVLAEQNLTTSKVFENLRKLPEITGEGSVDRKIATVSE 141
Query: 334 LLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAK 393
LL A+ +++IR + LRIG+AE L A+ +A + PP P+E A
Sbjct: 142 LLTTASPTGAKFIIRTILGDLRIGVAEGRLRDAIAEA------FNIPP----EPIEHA-- 189
Query: 394 IVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDM 453
+ + Y K+ A G LS T G P+ PMLA+ + + +I+++
Sbjct: 190 -----YMLANDYGKVAKAAAKKGKKGLSQ-LDLTIGRPVRPMLAQRSDDIEDIIDRMGG- 242
Query: 454 EFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCE 513
E E K DG R Q H D + +++R + T FPD+ AV+ KP ++D E
Sbjct: 243 EAAFETKLDGIRIQPHKQGD-EIFLFTRRMKDYTHMFPDLEEAVNEAVKPD--EAIVDGE 299
Query: 514 IVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRRE 572
+VA D++ +PFQ + R RK + ++ V IY FD+L G+ ++++ R RRE
Sbjct: 300 LVAIDKDTGNPMPFQEVLRRRRKYEIEKVSEEIPVHIYLFDVLLSGGETMIEKPYRERRE 359
Query: 573 HLYDSFEEEPGF-FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRS 631
L + +PG + D EI+ F V EGL+ K + D+ Y +R
Sbjct: 360 KLEEMI--DPGEKVRVVDKEILEDEREIKSFKKKVVSQGHEGLLAKNL--DSIYRAGRRE 415
Query: 632 LNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTG 691
WLKLK + ++LDLV + AF G+G R G YG++LLA D +++ ++G+G
Sbjct: 416 FAWLKLKAEV-----ETLDLVAVGAFAGKGDRAGTYGSYLLAARDPEKGRMKTVSRVGSG 470
Query: 692 FSEAMLEERSSSLRS-KVIPKPRPYYRFADTISPDVWFEPTE 732
F++ LE+ + + ++ KP I PD WF+P E
Sbjct: 471 FTDKDLEKFTRKFKKIRIEKKPE---NLDSEIEPDYWFKPQE 509
>gi|429964388|gb|ELA46386.1| DNA ligase I, ATP-dependent (dnl1) [Vavraia culicis 'floridensis']
Length = 660
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 216/401 (53%), Gaps = 32/401 (7%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L +F+ I+ ++GR+ I I+ N L T+ ++V YL + P +E EL IG+
Sbjct: 8 LCCIFEKIAEKSGRLEIQQILSNYLSTL---DKNNMVIAFYLCTGTVYPTYENKELNIGE 64
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLI 315
+ K + + GR +K +Y E GDLG +A + ++ + K + + +++D R I
Sbjct: 65 GILYKVIGDMTGRNIKALKGEYAECGDLGQIACKYKINKLVQMKKN-FELCEIYDGLRKI 123
Query: 316 AKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE 375
+ GKD+ +KKN I +L + E +Y +RLL+ KL+IGLA QT+L ++G V+
Sbjct: 124 GEIEGKDAIVRKKNAILKILSVMSTIEIRYFVRLLEGKLKIGLAIQTVLISIGM--VFEN 181
Query: 376 QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPM 435
+ E++ I+K+ ++ E ++ + DG+ +L P IP M
Sbjct: 182 K------------EDSLDILKRAYNRCASVEILLDKIHKDGIQSLE-CLGIVPLIPFRAM 228
Query: 436 LAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVL 495
L P +S F D F CE KYDGER QIH +D V+ YSRN E +T K+PD+ +
Sbjct: 229 LCNP---LSSFAVGFSD--FICEVKYDGERIQIHK-KDDQVKFYSRNGEDSTFKYPDLAM 282
Query: 496 AVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDIL 555
V + +F+LD E+VAYD KIL FQ LSTR RK+V D V +C++ FDIL
Sbjct: 283 IV----RAEKNNFILDGEVVAYDTSTGKILSFQVLSTRKRKDVGKVD--VFICVFVFDIL 336
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
NG+ LL LR RR+ L + E+ G ++A +L +++
Sbjct: 337 SINGKCLLDRTLRERRDVLKNMIREQDG-IKYAESLGEMNI 376
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 102/156 (65%), Gaps = 15/156 (9%)
Query: 592 TSIDLDE-IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLD 650
T I ++E I+K + +++ EGLIIK ++ + Y P+KRS +WLKLKKDYI S+ D++D
Sbjct: 472 TQIHIEETIEKAFNESLNQRHEGLIIKNLN--SLYVPNKRSNDWLKLKKDYI-SMADTVD 528
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR-SKVI 709
LV + AF+G+GKRTGVYG FL+ CY NNE ++ICK+GTGF E L L SK +
Sbjct: 529 LVVMGAFYGKGKRTGVYGGFLMGCY--NNERVEAICKLGTGFDEQTLGSLKDKLNVSKSV 586
Query: 710 PKPRPYYRFADTISPDVWFEP-----TERPETSNSP 740
PK Y+++D+ +PD+W +P SNSP
Sbjct: 587 PK---LYKYSDSSTPDLWIDPEYVFEVNAASISNSP 619
>gi|118387305|ref|XP_001026764.1| DNA ligase I, ATP-dependent [Tetrahymena thermophila]
gi|89308531|gb|EAS06519.1| DNA ligase I, ATP-dependent [Tetrahymena thermophila SB210]
Length = 635
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 169/563 (30%), Positives = 276/563 (49%), Gaps = 64/563 (11%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDL-VPVVYLAANKIAPAHEGLEL 251
F FL+ FD IS + R + + ++ ++ +L + +V L K+ E+
Sbjct: 34 FYFLAKQFDDISKISSRNSGIEAIETLMNDYIQGGDNELFIQMVRLLTCKVDSE----EI 89
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ-----SMMRKPDPLTIT 306
I ++S+++ L + + + K E GD+GL AK + + + + L+I
Sbjct: 90 QIANSSLVEILKVVYPQED--ITKFLFEKGDIGLYAKEMLEKKLEKEGNNRTEKNHLSIL 147
Query: 307 KVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD-CEPQYLIRLLQSKLRIGLAEQTLLA 365
+V F + G S+ +K+ I L D E QY IR+L LRIG++E++++
Sbjct: 148 EVTSFFEKLKNLQGDRSRLEKQELIIDFLKKIQDPLEIQYFIRILSKSLRIGVSEKSIIK 207
Query: 366 ALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCS 425
AL + K ++ S L+ V +KI +N +
Sbjct: 208 ALTNI------NKKKKNSLDSLLKN-------------VQDKIFG-------YNTALHTD 241
Query: 426 FTPGIPIGPMLAKPTKGVSEIVN---KFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
G P+ PMLAKP E++ K++ + + E KYDGER Q+HY + ++++SRN
Sbjct: 242 IQIGTPVPPMLAKPVSDFDELLKFLKKYESKKVSLELKYDGERCQVHYGKKKGIKLFSRN 301
Query: 483 AERNTGKFPDVVLAVSRL--KKPSVRSFVLDCEIVAYDREKQKILPFQ-TLSTRARKNVS 539
E K+P +V + + K SV +LD EIV D K I FQ R RK S
Sbjct: 302 LEIQNEKYPQLVQQLEKYFQKNNSVEDCILDGEIVVTD-SKGNIKSFQEQQQNRKRKQDS 360
Query: 540 LSDIKVDV----CIYAFDILYRNG-QPLLQEQLRVRREHLYDSF-------EEEPGFFQF 587
+ D IY FDIL+ N + +EQL R+ + ++F E F
Sbjct: 361 NKVVAFDEDNIEKIYLFDILFLNACEQNTKEQL-YRKSLIKENFPIEGPVNHAESKIFDL 419
Query: 588 ATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES-IG 646
+ D DE++K + +D EG ++K++D + Y+ + R+ W KLKK + +
Sbjct: 420 SI---QKDFDELKKLVKQYIDQKEEGAMVKSLDSNTFYDNNGRT-QWAKLKKQVLSGGLA 475
Query: 647 DSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRS 706
D+ D++PIAA++G+GKR+GVYG++LLACYD +E+ ++CKIGTGFS+ L++ + L+
Sbjct: 476 DTFDVIPIAAYYGKGKRSGVYGSYLLACYDDKKKEYVALCKIGTGFSDQFLQDSTDRLKQ 535
Query: 707 KVIPKPRPYYRFADTISPDVWFE 729
KV + Y T PDVWF+
Sbjct: 536 KVCSQKPKEYSVHRTFKPDVWFQ 558
>gi|298248791|ref|ZP_06972596.1| DNA ligase I, ATP-dependent Dnl1 [Ktedonobacter racemifer DSM
44963]
gi|297551450|gb|EFH85316.1| DNA ligase I, ATP-dependent Dnl1 [Ktedonobacter racemifer DSM
44963]
Length = 583
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 154/546 (28%), Positives = 267/546 (48%), Gaps = 33/546 (6%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+ F L+ F+ + + R + +V + R V PE++ + YL ++AP LE
Sbjct: 1 MEFAVLAQCFEALEGTSSRRNLVQLVTTLFRQVEH--PEEIQQICYLMQGRVAPLFMPLE 58
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP-DPLTITKVF 309
+G+ + ++++ALA+A + + ++Y +GDLGLVA Q +P +++ +VF
Sbjct: 59 MGMAEKAVLQALAQASSHSLEQITERYATLGDLGLVAA---QIQGETEQPIQKVSVNEVF 115
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
+ IA+ AGK + EKK+ + LL +Y +R++ KLR+G+ + T+L AL
Sbjct: 116 TVLQTIAQTAGKGAIEKKRVLLVGLLDHVDGESAKYSVRIVLGKLRLGIGDATILDALAI 175
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
+ + K + + I + ++ P E+ A+ + G
Sbjct: 176 TKWNDAKKRKLLEGVYHVTSDLGLIARTLWE-HPEAEEAQRAI---------ASLDIAVG 225
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTG 488
PI LA+ I+ K + +YKYDG R QIH ++G + I+SRN E T
Sbjct: 226 RPIHSQLAERLPTAEAIIEKMGSV--VAQYKYDGFRVQIH--KNGQQIAIFSRNLENLTD 281
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN-VSLSDIKVDV 547
FP+++ A + +LD E +AY+ ++ LPFQ + R RK+ V+L ++ +
Sbjct: 282 MFPEILEATR--TQVQAEQAILDGEALAYNATSEEFLPFQETTRRRRKHGVALMAQELPL 339
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
+ FDILY++G LL+ L R + L ++ + + D + D A+
Sbjct: 340 KAFVFDILYKDGASLLEYPLEERLKVLEETIPQTRNTLMVTRSHLVDDAKSLTLLFDEAI 399
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV- 666
EGL++K + YE R+ NW+K+K+ ++ D++D V + GRGKR +
Sbjct: 400 SKGLEGLVVKRW--GSHYEAGARNYNWVKIKRHAAGALDDTIDGVLLGYLFGRGKRAALG 457
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL--RSKVIPKPRPYYRFADTISP 724
GA L+ YD+ + F ++ KIGTG S +E+ S+ R+K +P R R I+P
Sbjct: 458 AGALLVGVYDARQDRFVTVTKIGTGLS----DEQWGSIRERTKGLPTDRQPARVFSLITP 513
Query: 725 DVWFEP 730
VW +P
Sbjct: 514 SVWLKP 519
>gi|290559352|gb|EFD92686.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 576
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 271/526 (51%), Gaps = 39/526 (7%)
Query: 209 RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR 268
R+ + DI+ + +T E++ P+V ++ P ++LGI D K++A A +
Sbjct: 19 RLEMIDILSALFS---KTVKEEVNPIVNFVQEQLLPPFYDVQLGIADRMAEKSIALAYQK 75
Query: 269 TESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKK 328
++ ++++Y ++GD+G VA+ +S ++ + L++ +V+D IA+ +G+ S ++K
Sbjct: 76 SQKKIEEEYSKLGDMGEVAEKECTS----KEGNDLSVKEVYDRLLQIARISGEGSVDQKI 131
Query: 329 NRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPL 388
++ +L A + E ++L+R + KLR+G+ E T++ AL +A N + K
Sbjct: 132 TQLAEILKACSPTEAKFLMRFIMGKLRLGVGEATIMEALSKAKTGNREFKKK-------- 183
Query: 389 EEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVN 448
+++ F++ + L + G + N + + PI P LA+ EI++
Sbjct: 184 ------IERAFNLCSDLGYVSDVLYSKGKEGIEN-FNISAMKPIRPALAERASSSEEIIS 236
Query: 449 KFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRS 507
+ + + K DG RAQ+H ++G ++++SRN E T P+V V+ +KK S
Sbjct: 237 RMG--KCAIDQKLDGFRAQVH--KNGQEIKVFSRNLENITHFMPEV---VNEIKKMKYDS 289
Query: 508 FVLDCEIVAYDREKQKILPFQ-TLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQ 566
F+LD E + YD + PFQ T+ R + N+ + + ++ FDI++ NG ++
Sbjct: 290 FILDSEALTYDENTGVLYPFQITIQRRRKHNIEEVSQDLPLRLFVFDIMFLNGNSMIDLP 349
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYE 626
RR+ + F + + +T D ++I KF D+A+++ EG++ K + ++ Y
Sbjct: 350 YSERRKEIDHLFSDTDTIAKTKMIVTD-DPNKIDKFFDSALESGLEGIVAKRL--ESVYS 406
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV-YGAFLLACYDSNNEEFQSI 685
R+ NW+K+K+ Y + D++DLV + F GRG R GA L YD ++ F+++
Sbjct: 407 AGARNFNWIKMKRSYKSKLNDTIDLVILGYFKGRGHRANFGIGAVLGGVYDPESDTFKTL 466
Query: 686 CKIGTGFSEAMLEERSSSLRS-KVIPKPRPYYRFADTISPDVWFEP 730
K+G+GFSE +E L KV KP R + PDVW P
Sbjct: 467 TKVGSGFSEEQFKELYKLLNDIKVDSKPA---RVDSILQPDVWTVP 509
>gi|288818769|ref|YP_003433117.1| DNA ligase [Hydrogenobacter thermophilus TK-6]
gi|384129518|ref|YP_005512131.1| ATP-dependent DNA ligase I [Hydrogenobacter thermophilus TK-6]
gi|288788169|dbj|BAI69916.1| DNA ligase [Hydrogenobacter thermophilus TK-6]
gi|308752355|gb|ADO45838.1| DNA ligase I, ATP-dependent Dnl1 [Hydrogenobacter thermophilus
TK-6]
Length = 572
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 264/544 (48%), Gaps = 53/544 (9%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
LS F + T R+ +++I+ +ML + T ED+ +VYL +I P G+ELG+ +
Sbjct: 6 LSQYFQRLEETTSRLEMSNILADMLG---KATYEDIDKMVYLTLGEILPPFRGIELGVSE 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLI 315
+ +AL+++ S V+K Y+ GDLG VA + + LT+ +V+D I
Sbjct: 63 KLMTEALSKSSNTKISEVEKLYKLTGDLGEVAYKLVNWEGR-----DLTVGQVYDEILDI 117
Query: 316 AKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE 375
A G + K RI +LL ++ E +Y+ R++ +LR+G+ + TL+ AL V +
Sbjct: 118 ATTRG---TKDKVLRIMSLLKGLSNLEAKYITRIIVGRLRLGVGDATLIEALAN-LVGGK 173
Query: 376 QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPM 435
+H ++ +E A + + V L+ G+ + + G PI
Sbjct: 174 EH-------KTDIERAYNLCSDLGLV-------AKTLIQKGLEGI-RSFKVQVGYPIRMA 218
Query: 436 LAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVL 495
LA+ EIV + E KYDG R Q+H +D VEIYSRN ER T FPDV
Sbjct: 219 LAERVTNAEEIVRRLG--RCAVEAKYDGFRLQVHK-KDKDVEIYSRNLERMTDMFPDVKS 275
Query: 496 AVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDI 554
A+ L+ R VL+ E + Y+ E + PFQ R RK V + + ++AFD+
Sbjct: 276 AI--LQHIKFRELVLEGEAITYNEETGEFYPFQITIQRKRKYGVYEYAKEFPLKLFAFDL 333
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGL 614
LY G+ + RR L + + +T + EI++F + AV EG+
Sbjct: 334 LYLEGEDFTSKPFIDRRRKLEEILPKNSLILPSEMFITD-SVKEIERFFEDAVARGLEGI 392
Query: 615 IIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV-YGAFLLA 673
+ K + DA Y R+ NW+KLK+ Y S+ D++D+V + F+G+G R + GA L A
Sbjct: 393 MAKRL--DAPYTAGSRNFNWIKLKRSYKGSLADTIDVVIVGYFYGKGSRAKLGIGALLTA 450
Query: 674 CYDSNNEEFQSICKIGTGFSE-------AMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
YD + F+++ K+G+GF+E ML+E I P + R + DV
Sbjct: 451 LYDPATDTFKTVSKVGSGFTEEEWIKLKEMLDE---------IKLPHRHARVDSLLEADV 501
Query: 727 WFEP 730
W EP
Sbjct: 502 WVEP 505
>gi|332295117|ref|YP_004437040.1| DNA ligase [Thermodesulfobium narugense DSM 14796]
gi|332178220|gb|AEE13909.1| DNA ligase [Thermodesulfobium narugense DSM 14796]
Length = 624
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 159/561 (28%), Positives = 280/561 (49%), Gaps = 43/561 (7%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
FI L+ VF+ + ET R+ + +I+ + + +PED+ +YL + K P+ E ++ G
Sbjct: 12 FILLAQVFEKLEKETSRLRMMEILADYFENI---SPEDVKIAIYLLSGKTGPSFEAVDFG 68
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTF 312
+G+ +I++L G + ++ Y+E+GDLGLVAK + K L++ +VF+
Sbjct: 69 VGEKFVIESLLRIYGGFKVEIEDMYKELGDLGLVAK-----NIVKDKQSSLSLNEVFNYL 123
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
+ IA +G SQ+KK + +L A+ E Y++R++ +LR+G + T++ AL A V
Sbjct: 124 KTIALTSGPSSQDKKIELLTEMLDRASSLEALYIVRIILGRLRLGAQDATVIEALSFARV 183
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
+ KP +++ +++ + L +G L + G PI
Sbjct: 184 -KSKDLKPK-------------IERCYNLTSDLGYVAYMLFKEGEEALDFVHAIV-GNPI 228
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
LA+ + EI NK + E KYDG R Q+H + D V+IYSRN E NT FP+
Sbjct: 229 RMALAERMENPEEIFNKLG--KCIVEPKYDGFRCQVHKIGD-KVKIYSRNLEDNTHMFPE 285
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYA 551
+V S +K ++ + + E +++D + + +PFQ R RK N+ K + +
Sbjct: 286 IV--ESTIKYCRAKNCIFEGEAISFDPKTLRFMPFQITVQRKRKHNILKVAAKFPLRLEV 343
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASC 611
FD+LY++ + + L R+ L D+ + + + + + I+ + V
Sbjct: 344 FDLLYKDDLDITSKPLFERKRLLNDTILKNDTIV-ISDSSEADSPERIKSLFEKYVSEGM 402
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESI-GDSLDLVPIAAFHGRGKRTGV-YGA 669
EG++IK + D Y+ R+ NW+KLK+ +SI D++D V + F+G+G+R + G+
Sbjct: 403 EGIMIKRL--DGVYQAGSRNFNWIKLKRSMKQSILSDTIDAVIMGYFYGKGQRIKLGIGS 460
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRS-KVIPKPRPYYRFADTISPDVWF 728
L+ Y+ + F++I K+G+GF+E E +L + KP Y I+PD W
Sbjct: 461 LLIGLYNPEMDCFETIAKLGSGFTEEEWVELLKNLEEIRTSFKPNNY---ISKINPDFWV 517
Query: 729 EP-----TERPETSNSPASIV 744
+P E E + SP V
Sbjct: 518 KPKIVVEVEADEITVSPVHTV 538
>gi|240103775|ref|YP_002960084.1| ATP-dependent DNA ligase [Thermococcus gammatolerans EJ3]
gi|239911329|gb|ACS34220.1| ATP-dependent DNA ligase (lig) [Thermococcus gammatolerans EJ3]
Length = 559
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 268/524 (51%), Gaps = 46/524 (8%)
Query: 224 METTPEDLVPVV-YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGD 282
++ TP+DL+ +V YL K+ P + ELG+G+ +IKA++ A G E ++ ++ GD
Sbjct: 30 LKKTPDDLLEIVPYLILGKVFPDWDERELGVGEKLLIKAVSMATGVPEKEIENSIKDTGD 89
Query: 283 LG---LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT 339
LG +A R +S +P LTI +V++TF +A+ +G+ SQ++K + L + A
Sbjct: 90 LGESVALALKKRRQKSFFSQP--LTIKRVYNTFVKVAEASGEGSQDRKMKYLANLFMDAG 147
Query: 340 DCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVF 399
E +Y+ R + +R G+AE L A+ +A ++ L E A ++ F
Sbjct: 148 PEEGKYIARTVLGTMRTGVAEGILRDAIAEAF-----------KVKVELVERAYMLTSDF 196
Query: 400 SVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
+ K+ +G LS S G PI PMLA+ V + + + E E
Sbjct: 197 GYVAKIAKL------EGNEGLSK-VSIQIGKPIRPMLAQNAASVKDALIEMGG-EAAFEI 248
Query: 460 KYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
KYDG R Q+H DG V IYSR E T P++V AV KPS +++ E+VA
Sbjct: 249 KYDGARVQVH--RDGDKVIIYSRRLENVTRSIPEIVEAVKASLKPS--KVIVEGELVAVG 304
Query: 519 REKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYD 576
E + PFQ + R R+ ++ ++ K+ + + FDILY NG+ L+ + RR+ L +
Sbjct: 305 -ENGRPRPFQYVLRRFRRKYNIEEMIEKIPLELNLFDILYVNGESLIDTKFTERRKRLEE 363
Query: 577 SFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLK 636
S EE + A L + +DE ++F A++ EGL+ K +D A YEP R WLK
Sbjct: 364 SVEESDKI-KLAEQLVTKKVDEAEEFYKRALELGHEGLMAKRLD--AIYEPGNRGKKWLK 420
Query: 637 LKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
+K ++LDLV I A G G+R + G+FL+ YD + EF + K+G+GF++
Sbjct: 421 IKPTM-----ENLDLVIIGAEWGEGRRAHLLGSFLVGAYDPESGEFVPVGKVGSGFTDED 475
Query: 697 LEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSP 740
L E + L+ +I R +F + I P V E T + E SP
Sbjct: 476 LVEFTKMLKPLII---REEGKFVE-IEPKVVIEVTYQ-EIQKSP 514
>gi|388858100|emb|CCF48337.1| related to DNA ligase I [Ustilago hordei]
Length = 1109
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 177/647 (27%), Positives = 286/647 (44%), Gaps = 148/647 (22%)
Query: 115 PSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRK------VNVNSVSAKEKIAELKSNIV 168
PS P + P K++ TP SP + V++ ++ A + L +I
Sbjct: 149 PSRTPSSPTREDLSTPFFPRKKAPSTPSSPSNKSLPTPKTVDLAALDASIQAIPLGDDIF 208
Query: 169 LLKKKAGEFDPKMV--ACW-----EKGE---RVPFIFLSLVFDMISNETGRILITDIVCN 218
+ FDP V + W + GE P+ L+ F I+ R+ IT ++ N
Sbjct: 209 V-------FDPWAVDTSIWPTIVGKGGELTPTTPYALLTHAFVTITATRSRLTITTLLTN 261
Query: 219 MLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQ 278
+LRTV P+ L+P VYL +N IAP ++G+ELG+G + I KA+ ++ +K+ +
Sbjct: 262 LLRTVRAHDPDSLLPTVYLVSNHIAPPYDGVELGLGGSIINKAIKSVTNKSARFMKQAWD 321
Query: 279 EMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA 338
+ GD G VA ++ + +P P+T+ ++F IA+ +G+ S +K + LLVA+
Sbjct: 322 KTGDPGDVAYEAKKDVKALVRPAPITVQRLFSNLHSIARLSGQGSASQKLGYVTKLLVAS 381
Query: 339 TDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHS---KP--------------- 380
E ++L+R S LRI T+ AL + E+ + KP
Sbjct: 382 RGEETRFLVRTFISHLRIQAVRTTIATALARTFALVEEKAPVVKPSTQREKERAALLLVY 441
Query: 381 -------------PPNIQSP--------LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN 419
P Q P L A K+V++V + P + IVP+L+ G+
Sbjct: 442 PHERKGILANATKPKERQDPNRLALMERLARAEKLVREVRARHPNFGLIVPSLVQYGLAG 501
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL-------- 471
LS G PI PML T+ + + K F E+KYDG+R QIH +
Sbjct: 502 LSEHVPLRVGTPISPMLGSITRSLGAMHEKLGPRAFVSEFKYDGQRCQIHAIYVPRSAGP 561
Query: 472 ------------------------EDGS--VEIYSRNAERNTGKFPDV------------ 493
++G V ++SR+ E T K+PD+
Sbjct: 562 EARRSVKEETAASNGGAKFGKWVGKNGQVYVRLFSRHLEEMTDKYPDITDMVPILMGQES 621
Query: 494 --------------------------VLAVSRLKKPS-------VRSFVLDCEIVAYDRE 520
V LK P+ + SF++D E+VA D +
Sbjct: 622 ESNANIGASAFVDAAASSTKLQSDGTVAEADELKCPTEDGKGEPITSFIMDAEVVAMDLD 681
Query: 521 KQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF-- 578
++LPFQTL+ R+RK+V+L DIKV V ++AFD++Y +G+ LL+ R RR L+ F
Sbjct: 682 G-RLLPFQTLANRSRKDVNLHDIKVKVGVFAFDLMYLDGESLLKSSFRTRRNLLHSRFLP 740
Query: 579 --EEEPGFFQFA--TTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR 621
+ P +FA + S D D++ +F A + CEG+++K++D
Sbjct: 741 LSPQSPLIARFAHVQSCESTDPDDVARFFSQAQEYKCEGIMVKSLDH 787
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+TYEP KR +WLK+KKDY++ +GDSLDLVPI A+HG G++ + LLA YD
Sbjct: 883 STYEPDKRCESWLKVKKDYVDGLGDSLDLVPIGAWHGMGRKATWWSPILLALYDPETGVL 942
Query: 683 QSICKIGTGFSEAMLE-------ERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEPTER 733
Q++CK +GF++A + E S + +P + +T + PDVW++P+E
Sbjct: 943 QAVCKCISGFTDAFYKDLNVRYAEGSETCVRARWGEPSAFGIELETGNLWPDVWWKPSEV 1002
Query: 734 PETSNSPASI 743
E + +I
Sbjct: 1003 WELRGADVTI 1012
>gi|409095358|ref|ZP_11215382.1| ATP-dependent DNA ligase [Thermococcus zilligii AN1]
Length = 559
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 271/551 (49%), Gaps = 48/551 (8%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLELGIG 254
LS ++ + T + L T +V + L+ TP DL+ VV YL K+ P + ELG+G
Sbjct: 6 LSELYRGLEKTTLKTLKTRLVGDFLKK----TPGDLIEVVPYLILGKVFPDWDERELGVG 61
Query: 255 DASIIKALAEACGRTESHVKKQYQEMGDLG---LVAKASRSSQSMMRKPDPLTITKVFDT 311
+ +I A+A A G E ++ ++ GDLG +A R +S +P LTI +V+DT
Sbjct: 62 EKLLIDAVAMATGVPEREIENSIKDTGDLGESVALALKRRKQKSFFSQP--LTIKRVYDT 119
Query: 312 FRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAA 371
F IA+ G+ SQ++K + L + A E +Y+ R + +R G+AE L A+ +A
Sbjct: 120 FVKIAEAQGEGSQDRKMKYLANLFMDAEPEEGKYIARTILGTMRTGVAEGILRDAIAEAF 179
Query: 372 VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIP 431
++ L E A ++ F + KI +G+ G P
Sbjct: 180 -----------KVEPELVERAYMLTSDFGYVA---KIAKLEGNEGLLK----VEIQIGKP 221
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFP 491
I PMLA+ V E + + E E KYDG R QIH D V +YSR E T P
Sbjct: 222 IRPMLAQNAASVKEALLEMGG-EAAFEIKYDGARVQIHKNGD-KVIVYSRRLENVTRSIP 279
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCI 549
+VV A+ KP +++ E+VA K PFQ + R R+ ++ ++ K+ + +
Sbjct: 280 EVVEAIRNSLKPG--RAIVEGELVAVGN-GGKPRPFQYVLRRFRRKYNIEEMMEKIPLEL 336
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
FDILY G+ L+ R RR+ L S EE + A L + +E ++F A++
Sbjct: 337 NLFDILYAEGESLIDAPFRDRRKRLESSAEENEKV-KLAQQLVTKKAEEAEEFYKKALEL 395
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EGL+ K +D + YEP R WLK+K ++LDLV I A G GKR + G+
Sbjct: 396 GHEGLMAKRLD--SVYEPGNRGKKWLKIKPTM-----ENLDLVIIGAEWGEGKRAHLLGS 448
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
FL+A YD N EF + K+G+GF++ LEE + L+ ++ R +F + I P V E
Sbjct: 449 FLVAAYDPNRGEFVPVGKVGSGFTDEDLEEFTEMLKPLIV---REEGKFVE-IEPRVVIE 504
Query: 730 PTERPETSNSP 740
T + E SP
Sbjct: 505 VTYQ-EIQKSP 514
>gi|223478331|ref|YP_002582768.1| ATP-dependent DNA ligase [Thermococcus sp. AM4]
gi|214033557|gb|EEB74384.1| ATP-dependent DNA ligase [Thermococcus sp. AM4]
Length = 562
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 269/524 (51%), Gaps = 46/524 (8%)
Query: 224 METTPEDLVPVV-YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGD 282
++ TP+DL+ +V YL K+ P + ELG+G+ +I+A++ A G E ++ ++ GD
Sbjct: 33 LKKTPDDLLEIVPYLILGKVFPDWDERELGVGEKLLIRAVSMATGVPEKEIENSIKDTGD 92
Query: 283 LG---LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT 339
LG +A R +S +P LTI +V++TF +A+ +G+ SQ++K + L + AT
Sbjct: 93 LGESVALALKKRKQKSFFSQP--LTIKRVYNTFVKVAEASGEGSQDRKMKYLANLFMDAT 150
Query: 340 DCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVF 399
E +YL R + +R G+AE L A+ +A ++ L E A ++ F
Sbjct: 151 PEEGKYLARTVLGTMRTGVAEGILRDAIAEAF-----------KVKPELVERAYMLTSDF 199
Query: 400 SVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
+ K+ +G LS S G PI PMLA+ V E + + E E
Sbjct: 200 GYVTRVAKL------EGNEGLSK-VSIQIGKPIRPMLAQNAANVKEALIEMGG-EAAFEI 251
Query: 460 KYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
KYDG R Q+H DG V IYSR E T P++V AV +PS +++ E+VA
Sbjct: 252 KYDGARVQVH--RDGDRVIIYSRRLENVTRSIPEIVEAVKASLRPS--KVIVEGELVAVG 307
Query: 519 REKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYD 576
E + PFQ + R R+ ++ ++ K+ + + FDILY G+ L+ + RR+ L +
Sbjct: 308 -ENGRPRPFQYVLRRFRRKYNIEEMIEKIPLELNLFDILYVEGESLIDTKFAERRKKLEE 366
Query: 577 SFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLK 636
S EE + A L + +DE ++F A++ EGL+ K +D + YEP R WLK
Sbjct: 367 SVEESDKI-KLAEQLVTKKVDEAEEFYKRALELGHEGLMAKRLD--SVYEPGNRGKKWLK 423
Query: 637 LKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
+K ++LDLV I A G G+R + G+FL+A YD + EF + K+G+GF++
Sbjct: 424 IKPTM-----ENLDLVIIGAEWGEGRRAHLLGSFLVAAYDPESGEFVPVGKVGSGFTDED 478
Query: 697 LEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSP 740
L E + L+ ++ R +F + I P V E T + E SP
Sbjct: 479 LIEFTKMLKPLIV---REEGKFVE-IQPKVVIEVTYQ-EIQKSP 517
>gi|301115274|ref|XP_002905366.1| DNA ligase, putative [Phytophthora infestans T30-4]
gi|262110155|gb|EEY68207.1| DNA ligase, putative [Phytophthora infestans T30-4]
Length = 497
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 188/358 (52%), Gaps = 63/358 (17%)
Query: 429 GIPIGPMLAKPTKGVSEI---VNKFQDMEFTCEYKYDGERAQIHY-LEDGSVEIYSRNAE 484
G+P+ M A P V+ + V+K TCEYKYDG R Q+H L DG I+SRN E
Sbjct: 76 GVPVLTMSAYPASSVTAVLDRVDKSTSGTATCEYKYDGARVQVHLSLADGVGRIFSRNME 135
Query: 485 RNTGKFPDVVLAVSRL---------KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
T ++ ++ + V S +++ E+VA DRE LPFQ L T+
Sbjct: 136 DVTERYSSLLGVLENRVTARNAATPHSSCVTSLIVEGEVVALDRETGSFLPFQVLQTK-- 193
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF-------- 587
+ C++ FD+L + LLQ+ LR RR L++ EEEPG+ +F
Sbjct: 194 -------TTTEFCLFLFDLLAVDDTNLLQKSLRKRRALLHNLVEEEPGYVEFVKHVDISL 246
Query: 588 ----ATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLKKDYI 642
AT + ++K L+ AV + CEGL+IK +D ++ Y+ +RS +W+KLK DY+
Sbjct: 247 VSNEATDEEKPEASAVRKCLELAVSSGCEGLMIKALDGEESEYKAGRRSYSWMKLKHDYL 306
Query: 643 ES-----------------------IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNN 679
+ D+LDLVPI AF+G+G+R GV+G+FL+A Y+S +
Sbjct: 307 SDEATTNASSEGRSVAASAAGNGTFLADTLDLVPIGAFYGKGRRAGVFGSFLMATYNSVS 366
Query: 680 EEFQSICKIGTGFSEAMLEERSSSLRSKVIPK----PRPYYRFA-DTISPDVWFEPTE 732
+F++I K+GTGFS+A L E ++ L+ +++P+ P Y A + PDVW P E
Sbjct: 367 GKFETIGKVGTGFSDAQLSEVAARLQHQLLPETDEVPGQYQSIAIRSRHPDVWLSPEE 424
>gi|410931971|ref|XP_003979368.1| PREDICTED: DNA ligase 1-like, partial [Takifugu rubripes]
Length = 525
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 186/335 (55%), Gaps = 47/335 (14%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P A W + ++VP++ ++ F+ I ++GR+ + + N+ R+V+ +P+DL+ VY
Sbjct: 226 YHPVDHASWTRDQKVPYLAVARTFEKIEEDSGRLRNIETLSNLFRSVLLLSPDDLLSCVY 285
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L N++ PA++G+ELG+G+ ++KA+A+A GR +K + QE GDLGLVA++SRS+Q M
Sbjct: 286 LCLNQLGPAYQGMELGVGETVLMKAVAQATGRQLDKIKAEAQERGDLGLVAESSRSNQRM 345
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M +P LT+ VF + IA G + KK + IK L VA E +Y++R L KLRI
Sbjct: 346 MFQPASLTVGGVFRKLKEIASMTGNSAMNKKIDIIKGLFVACRFSEARYIVRSLAGKLRI 405
Query: 357 GLAEQTLLAALGQA------------AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA AV + P + +S +EE + I+KQ + +P
Sbjct: 406 GLAEQSVLAALSQAVCLTPPGQGFPPAVLDAGKGMSPESRRSWMEEKSLILKQTYCEMPN 465
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y+ ++P LL +G+ L N C TP P +
Sbjct: 466 YDVLIPVLLKEGIDQLPNHCKLTPA---------PQR----------------------- 493
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSR 499
IH LE G V I+SRN E NT K+PD+V V++
Sbjct: 494 ---IHILETGEVRIFSRNQEDNTSKYPDIVSRVAK 525
>gi|302829404|ref|XP_002946269.1| hypothetical protein VOLCADRAFT_86370 [Volvox carteri f. nagariensis]
gi|300269084|gb|EFJ53264.1| hypothetical protein VOLCADRAFT_86370 [Volvox carteri f. nagariensis]
Length = 2638
Score = 208 bits (530), Expect = 8e-51, Method: Composition-based stats.
Identities = 136/399 (34%), Positives = 204/399 (51%), Gaps = 61/399 (15%)
Query: 162 ELKSNIVLLKKKAGEFDPKMVACWEKGER-VPFIFLSLVFDMISNETGRILITDIVCNML 220
EL++ ++L G++DP ACW P++ ++L I + R+ I D + NM
Sbjct: 1704 ELRAAVLL---PLGKYDPVRHACWGPARAPTPYLHVALSLAAIDSTPKRLAIADALTNMF 1760
Query: 221 RTVME---TTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQY 277
R+++ T EDLV V+YL +IAP +E +EL +G A++ AL A G + + +++ Y
Sbjct: 1761 RSILALAATPAEDLVAVLYLVTGRIAPEYEKMELSVGGATVSGALMAATGVSATGLRQLY 1820
Query: 278 QEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVA 337
++ GDLG VA+A R QS +R P PL + ++ R IA + G +++ + +L A
Sbjct: 1821 RQFGDLGDVAQACRRKQSTLRSPQPLLVGRLLQQLRAIAADRGSGVAARRQAAVLGMLRA 1880
Query: 338 ATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK------------------ 379
DCE +YL R L S LR+G +++L LG+A + ++ +K
Sbjct: 1881 CRDCEVKYLTRTLISNLRVGANWRSVLGPLGRAVLVHQHQAKGEEEAEAAAADTTRTMAA 1940
Query: 380 ---------------------PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
P+ ++ L+ AA V + + P +E +VPALL GV
Sbjct: 1941 AAAGPGPSNGLRGSGGGGGGGGAPS-KADLDSAAAAVVAAYHLCPDFEVLVPALLEGGVE 1999
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSE-IVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE 477
L + C TPG+PI PMLAK GV++ ++ + F EYKYDG RAQIH L DG V
Sbjct: 2000 GLRSRCVLTPGVPIKPMLAKICGGVADGLMQLGPGVPFLAEYKYDGVRAQIHLLPDGRVL 2059
Query: 478 IYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVA 516
I+SRN E T FPDV S VLD E+VA
Sbjct: 2060 IFSRNGEDRTEAFPDV-------------SCVLDAEVVA 2085
Score = 129 bits (324), Expect = 6e-27, Method: Composition-based stats.
Identities = 61/136 (44%), Positives = 88/136 (64%), Gaps = 2/136 (1%)
Query: 606 AVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
A +A EGL++K +D A YEPS+RS +W+K+K+DY+E + DS+D+VPI A++G+G++
Sbjct: 2380 AFNAGAEGLMLKRLDGGAAYEPSRRSESWIKIKRDYVEGLRDSVDVVPIGAWYGQGRKVK 2439
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
+ LLA YD EEFQS+C+ +GFS+ L + IP P+PYY A+ P
Sbjct: 2440 WFSPVLLAVYDPVREEFQSLCRCMSGFSDEFYTAARERLGAVTIPGPKPYYNTAE--RPS 2497
Query: 726 VWFEPTERPETSNSPA 741
VWFEPTE E + A
Sbjct: 2498 VWFEPTEVWELRGAAA 2513
Score = 48.5 bits (114), Expect = 0.015, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 523 KILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHL 574
++ FQ L+TRAR V + V VC++ FD+L+ NG+ LL LR RR L
Sbjct: 2165 RLRAFQELATRARGPVEEHQVTVQVCVFVFDLLFWNGKALLDRPLRERRALL 2216
>gi|289548048|ref|YP_003473036.1| DNA ligase I, ATP-dependent Dnl1 [Thermocrinis albus DSM 14484]
gi|289181665|gb|ADC88909.1| DNA ligase I, ATP-dependent Dnl1 [Thermocrinis albus DSM 14484]
Length = 577
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 160/546 (29%), Positives = 262/546 (47%), Gaps = 45/546 (8%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+ FI L+ F + N T R+ + DI+ +L++ + E++ V+YL ++ P G+E
Sbjct: 1 MKFIELAQYFKELENTTSRLHMADILYRLLKSC---SGEEVDKVIYLTLGELLPPFTGVE 57
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
+GI + ++A+++A G S V+ Y++ GD+G A + + + L++ +V+D
Sbjct: 58 MGISEKLSLEAISKATGTKLSQVESIYRQTGDIGETA-----ATLIKWEGKGLSVVQVYD 112
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEP---QYLIRLLQSKLRIGLAEQTLLAAL 367
IAK G +++ AL+ P +Y++R++ +LR+G+ E TLL AL
Sbjct: 113 ELLKIAKTRG------TLDKLMALISLLRGLSPLCAKYVMRIVVGRLRLGVGEATLLDAL 166
Query: 368 GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
A N + +E A + + V LL G+ +
Sbjct: 167 AMLA--------GNRNWRQDIERAYNLCSDLGLV-------ARTLLEKGIEGVKG-MKLQ 210
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNT 487
G P+ LA+ EI+ + + E KYDG R QIH +D VEIYSRN ER T
Sbjct: 211 VGYPVRMALAERVSSAEEIIKRLG--KCAVEAKYDGLRLQIHKSKD-RVEIYSRNLERMT 267
Query: 488 GKFPDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKV 545
FPD+ AV S L V + + E ++YD E + PFQ R RK V +
Sbjct: 268 EMFPDITSAVLSAL--AHVEDIIFEGEAISYDEETGEFHPFQITIQRKRKYGVYQYSKEY 325
Query: 546 DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDA 605
+ +++FD+LY NG + +E RR L + + + EI++F
Sbjct: 326 PLKLFSFDLLYVNGNDMTEEPFIERRRTLENLLSGKQDTILLSEMRIVETAKEIEEFFQD 385
Query: 606 AVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
AV EG++ K + DA Y R+ NW+KLK+ Y ++ D++D+V + F+G+G R
Sbjct: 386 AVSRGLEGIMAKRL--DAPYTAGSRNFNWIKLKRSYRGALTDTVDVVIVGYFYGKGARAK 443
Query: 666 V-YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
+ GA L A YD + + F++I K+G+GF+E + L I P + R +
Sbjct: 444 LGIGALLTAVYDPSTDTFKTISKVGSGFTEDEWIRLKNLLDE--IKLPHRHARVDSILEA 501
Query: 725 DVWFEP 730
DVW EP
Sbjct: 502 DVWVEP 507
>gi|269986752|gb|EEZ93032.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 577
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 254/525 (48%), Gaps = 37/525 (7%)
Query: 209 RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR 268
R+ + DI+ + ++T E++ V ++ P ++LGI D + KA+A A +
Sbjct: 19 RLEMIDILSEVF---LKTKKEEINYTVNFIQEQLLPPFYNVQLGIADKMVEKAIALAYNK 75
Query: 269 TESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKK 328
S + ++Y+++GDLG VA+ +S K IT V+ I+K +G+ S E+K
Sbjct: 76 PSSKILEEYKKVGDLGEVAE----KESNNSKVSETNITLVYGNLLKISKFSGEGSTEEKI 131
Query: 329 NRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPL 388
+ L+ + + E +++IR + KLR+G+ E T++ AL +A + Q NI+
Sbjct: 132 KGLSDLIASTSPIESKFIIRFVMGKLRLGVGEATIMEALSKARTGSRQF---KANIE--- 185
Query: 389 EEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVN 448
+ F++ + L + G + N PI P LA+ EI+
Sbjct: 186 --------RAFNLCSDLGYVAEVLYSKGEEGI-NKFEIAAMKPIRPALAERLGSSKEILE 236
Query: 449 KFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSF 508
K + + K DG RAQ+H +D V ++SRN E T P+V V +KK
Sbjct: 237 KMG--KCAIDQKLDGFRAQVHK-KDKEVRVFSRNLEDITHFMPEV---VEEVKKIDCEDL 290
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQL 567
++D E + YD + PFQ R RK NV ++ + ++ FDI+ N + ++ E
Sbjct: 291 IIDGEALTYDENTNVLYPFQITIQRKRKHNVEEISQELPLRLFVFDIMLFNKKNMINEPY 350
Query: 568 RVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEP 627
RRE L F + +T + D I KF D ++ EG++ K + D+TY
Sbjct: 351 TKRRELLDKLFSNTNTISKTKMIITDNEKD-IDKFFDLTIEQGLEGIVAKRL--DSTYSA 407
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV-YGAFLLACYDSNNEEFQSIC 686
R+ NW+K+K+ Y + D++DLV + F GRG+R GA L YDS ++F+SI
Sbjct: 408 GARNFNWIKMKRSYKSKLNDTIDLVILGYFKGRGQRASFGLGAVLAGVYDSKEDKFKSIT 467
Query: 687 KIGTGFSEAMLEERSSSLRS-KVIPKPRPYYRFADTISPDVWFEP 730
K+G+GFSE ++ L KV KP R + PDVW P
Sbjct: 468 KVGSGFSEEQFKQLFKILNEIKVDIKPA---RVDSIMQPDVWVVP 509
>gi|383875391|pdb|3RR5|A Chain A, Dna Ligase From The Archaeon Thermococcus Sp. 1519
Length = 570
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 268/524 (51%), Gaps = 46/524 (8%)
Query: 224 METTPEDLVPVV-YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGD 282
++ TP++L+ VV YL K+ P + ELG+G+ +IKA++ A G E ++ ++ GD
Sbjct: 41 LKKTPDELLEVVPYLILGKVFPDWDERELGVGEKLLIKAVSMATGVPEKEIENSIKDTGD 100
Query: 283 LG---LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT 339
LG +A R +S +P LTI +V+ TF +A+ +G+ SQ++K + L + A
Sbjct: 101 LGESVALALKKRKQKSFFSQP--LTIKRVYSTFVKVAEASGEGSQDRKMKYLANLFMDAQ 158
Query: 340 DCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVF 399
E +Y+ R + +R G+AE L A+ +A ++ L E A ++ F
Sbjct: 159 PEEGKYIARTVLGTMRTGVAEGILRDAIAEAF-----------RVKPELVERAYMLTSDF 207
Query: 400 SVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
+ K+ +G LS S G PI PMLA+ V E + + E E
Sbjct: 208 GYVAKVAKL------EGNEGLSK-VSIQIGKPIRPMLAQNAASVKEALIEMGG-EAAFEI 259
Query: 460 KYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
KYDG R Q+H DG V IYSR E T P++V AV KPS +++ E+VA
Sbjct: 260 KYDGARVQVH--RDGDRVIIYSRRLENVTRSIPEIVEAVKASLKPS--KVIVEGELVAVG 315
Query: 519 REKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYD 576
E + PFQ + R R+ ++ ++ K+ + + FDILY +G+ L+ + RR+ L +
Sbjct: 316 -ENGRPRPFQYVLRRFRRKYNIDEMIEKIPLELNLFDILYVDGESLIDTEFVERRKRLEE 374
Query: 577 SFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLK 636
S EE + A L + ++E + F A++ EGL+ K +D + YEP R WLK
Sbjct: 375 SVEESEKI-KIAEQLVTKKVEEAEAFYKRALELGHEGLMAKRLD--SVYEPGNRGKKWLK 431
Query: 637 LKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
+K ++LDLV I A G G+R + G+FL+A YD ++ EF + K+G+GF++
Sbjct: 432 IKPTM-----ENLDLVIIGAEWGEGRRAHLLGSFLVAAYDPDSGEFLPVGKVGSGFTDED 486
Query: 697 LEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSP 740
L E + L+ ++ R +F + I P V E T + E SP
Sbjct: 487 LVEFTKMLKPLIL---REEGKFVE-IEPKVVIEVTYQ-EIQKSP 525
>gi|224590086|gb|ACN59570.1| thermostable ATP-dependent DNA ligase [Thermococcus sp. 1519]
Length = 559
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 268/524 (51%), Gaps = 46/524 (8%)
Query: 224 METTPEDLVPVV-YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGD 282
++ TP++L+ VV YL K+ P + ELG+G+ +IKA++ A G E ++ ++ GD
Sbjct: 30 LKKTPDELLEVVPYLILGKVFPDWDERELGVGEKLLIKAVSMATGVPEKEIENSIKDTGD 89
Query: 283 LG---LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT 339
LG +A R +S +P LTI +V+ TF +A+ +G+ SQ++K + L + A
Sbjct: 90 LGESVALALKKRKQKSFFSQP--LTIKRVYSTFVKVAEASGEGSQDRKMKYLANLFMDAQ 147
Query: 340 DCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVF 399
E +Y+ R + +R G+AE L A+ +A ++ L E A ++ F
Sbjct: 148 PEEGKYIARTVLGTMRTGVAEGILRDAIAEAF-----------RVKPELVERAYMLTSDF 196
Query: 400 SVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEY 459
+ K+ +G LS S G PI PMLA+ V E + + E E
Sbjct: 197 GYVAKVAKL------EGNEGLSK-VSIQIGKPIRPMLAQNAASVKEALIEMGG-EAAFEI 248
Query: 460 KYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
KYDG R Q+H DG V IYSR E T P++V AV KPS +++ E+VA
Sbjct: 249 KYDGARVQVH--RDGDRVIIYSRRLENVTRSIPEIVEAVKASLKPS--KVIVEGELVAVG 304
Query: 519 REKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYD 576
E + PFQ + R R+ ++ ++ K+ + + FDILY +G+ L+ + RR+ L +
Sbjct: 305 -ENGRPRPFQYVLRRFRRKYNIDEMIEKIPLELNLFDILYVDGESLIDTEFVERRKRLEE 363
Query: 577 SFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLK 636
S EE + A L + ++E + F A++ EGL+ K +D + YEP R WLK
Sbjct: 364 SVEESEKI-KIAEQLVTKKVEEAEAFYKRALELGHEGLMAKRLD--SVYEPGNRGKKWLK 420
Query: 637 LKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
+K ++LDLV I A G G+R + G+FL+A YD ++ EF + K+G+GF++
Sbjct: 421 IKPTM-----ENLDLVIIGAEWGEGRRAHLLGSFLVAAYDPDSGEFLPVGKVGSGFTDED 475
Query: 697 LEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSP 740
L E + L+ ++ R +F + I P V E T + E SP
Sbjct: 476 LVEFTKMLKPLIL---REEGKFVE-IEPKVVIEVTYQ-EIQKSP 514
>gi|337283857|ref|YP_004623331.1| ATP-dependent DNA ligase [Pyrococcus yayanosii CH1]
gi|334899791|gb|AEH24059.1| ATP-dependent DNA ligase [Pyrococcus yayanosii CH1]
Length = 588
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 274/549 (49%), Gaps = 57/549 (10%)
Query: 191 VPFIFLSL--VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHE 247
VP +L L ++ + T + L T +V + L+ V P DL+ ++ YL + P +
Sbjct: 26 VPMRYLELAQLYQRLEKTTLKTLKTRLVADFLKKV----PNDLLEIIPYLILGDVFPEWD 81
Query: 248 GLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLG-LVAKASRSSQSMMRKPDPLTIT 306
ELG+G+ +I+A++ A G ++ +E GDLG VA A + + PLTI
Sbjct: 82 ERELGVGEKLLIRAVSMATGVDAKEIENSVKETGDLGESVALAIKKRKQRSFFSQPLTIK 141
Query: 307 KVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAA 366
+V+DT +A+ +G+ SQ+KK + L + A E +YL R + +R G+AE L A
Sbjct: 142 RVYDTLVKVAEISGEGSQDKKLKYLANLFMDAEPIEAKYLARTILGIMRTGVAEGILRDA 201
Query: 367 LGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF 426
+ +A +++ L E A ++ F + K+ +G L+ +
Sbjct: 202 IAEAF-----------HVKVELVERAYMLTSDFGFVTKVAKL------EGNEGLAK-VTI 243
Query: 427 TPGIPIGPMLAKPTKGVSE-IVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAE 484
G PI PMLA+ + + ++ + EF E KYDG R Q+H +DG + +YSR E
Sbjct: 244 QVGKPIKPMLAQQAASIKDALLEMGGEAEF--EIKYDGARVQVH--KDGDRIIVYSRRLE 299
Query: 485 RNTGKFPDVVLAVSRLKKP-SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
T P+VV RLK+ +++ E+VA E + LPFQ + R R+ ++ ++
Sbjct: 300 NVTRSIPEVV---ERLKRAIKAEKAIVEGELVAVG-EDGRPLPFQYVLRRFRRKYNIEEM 355
Query: 544 --KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
K+ + + FD+LY G+ L+ E RR+ L + E G+ + A L + ++E +
Sbjct: 356 IEKIPLELNLFDVLYVGGKALIDEPFIERRKTL-EGIIEADGWIKVAENLITKSVEEAES 414
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
F A+ EGL+ K +D + YEP R WLK+K ++LDLV I A G G
Sbjct: 415 FYRKALGMGHEGLMAKRLD--SVYEPGNRGKKWLKIKPTM-----ENLDLVIIGAEWGEG 467
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT 721
+R V+G+F+L YD + EF + K+G+GF++ L E + L+ ++I K
Sbjct: 468 RRAHVFGSFILGAYDPHTGEFVEVGKVGSGFTDEDLIEFTKMLK-RLITKEE-------- 518
Query: 722 ISPDVWFEP 730
VWFEP
Sbjct: 519 -GKRVWFEP 526
>gi|327507709|sp|P0CL74.1|DNLI_PYRAY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|12054709|emb|CAC20743.1| DNA ligase [Pyrococcus abyssi]
Length = 559
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 269/546 (49%), Gaps = 57/546 (10%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLEL 251
+I L+ ++ + T +++ T +V + L+ V PED + + YL + P + EL
Sbjct: 3 YIELAQLYQKLEKTTMKLIKTRLVADFLKKV----PEDHLEFIPYLILGDVFPEWDEREL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLG---LVAKASRSSQSMMRKPDPLTITKV 308
G+G+ +IKA++ A G ++ ++ GDLG +A R +S +P LTI +V
Sbjct: 59 GVGEKLLIKAVSMATGIDSKEIENSVKDTGDLGESIALAVKRRKQKSFFSQP--LTIKRV 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
+ T +A+ G+ SQ+KK + L + A E +Y+ R + +R G+AE L A+
Sbjct: 117 YQTLVKVAETTGEGSQDKKMKYLANLFMDAEPIEAKYIARTVLGTMRTGVAEGLLRDAIS 176
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
A N++ L E A ++ F + KI DG+ +
Sbjct: 177 LAF-----------NVKVELVERAYMLTSDFGFVA---KIAKTEGNDGL----AKVTIQI 218
Query: 429 GIPIGPMLAKPTKGVSE-IVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERN 486
G PI PMLA+ + E ++ + EF E KYDG R Q+H +DG V IYSR E
Sbjct: 219 GKPIKPMLAQQAANIKEALLEMGGEAEF--EIKYDGARVQVH--KDGEKVTIYSRRLENV 274
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--K 544
T P++V A+ KP+ +++ E+VA E + LPFQ + R R+ ++ ++ K
Sbjct: 275 TRAIPEIVEAIKEALKPA--KAIVEGELVAIG-EDGRPLPFQYVLRRFRRKYNIEEMMEK 331
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + + FD+LY +G L+ + RR+ L + E G + A L + +++E ++F
Sbjct: 332 IPLELNLFDVLYVDGVSLIDTKFMERRKKL-EEIVEANGKVKIAENLITKNVEEAEQFYK 390
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A++ EGL+ K +D A YEP R WLK+K ++LDLV I A G G+R
Sbjct: 391 RALEMGHEGLMAKRLD--AIYEPGNRGKKWLKIKPTM-----ENLDLVIIGAEWGEGRRA 443
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
+ G+F+L YD EF + K+G+GF++ L E + LR +I +
Sbjct: 444 HLLGSFILGAYDPETGEFLEVGKVGSGFTDDDLVEFTKMLRPLIIKEE----------GK 493
Query: 725 DVWFEP 730
VW +P
Sbjct: 494 RVWIQP 499
>gi|255513815|gb|EET90080.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 590
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/547 (26%), Positives = 267/547 (48%), Gaps = 42/547 (7%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F L+ ++ + + R+ + DI L++ + E++ ++Y+ +APA +G+E G
Sbjct: 3 FSELAKYYEKLEATSSRLGMIDIFAEALKS---ASVEEIDKIIYMTQGVLAPAFDGIEFG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS---MMRKPDPLTITKVF 309
+ + +A+A A G T+ + Y++ GDLG+ A+ +S M++K T+ +V+
Sbjct: 60 LAEKMAEEAIAIATGYTKEETDRDYKKSGDLGITAENLKSKSKLKPMLQK--KYTVIEVY 117
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
+T + I++ +G S++ K + L+ ++ E +YL+R +LR+GL + T+L +L
Sbjct: 118 NTMKKISETSGSGSKDIKIRLLSELIASSAGIEARYLVRYPLGQLRLGLGDATILESLSI 177
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + + + + + K++F G+ + N F
Sbjct: 178 AKTGSRVEKETLERAYNLCSDLGYVGKELFE--------------GGIGRVRN---FKVA 220
Query: 430 I--PIGPMLAKPTKGVSEIVNKFQDMEFTC--EYKYDGERAQIHYLEDGSVEIYSRNAER 485
+ PI P LA+ EI+ K M C E KYDG R Q+H + V I+SR E
Sbjct: 221 MFKPIRPALAERLPTAEEILKK---MGGRCAVEQKYDGFRCQVH-MHGKKVRIFSRRLED 276
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN-VSLSDIK 544
T FPD+ A + LK+ + + E +AY+ + LPFQ R RK+ + I+
Sbjct: 277 TTQMFPDI--ADAALKEVHSDDIIFEGEALAYNEATGEFLPFQETIQRKRKHEIGKKAIE 334
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + + AFD++Y NG+ + E+ RR+ L E +T E+++F +
Sbjct: 335 LPLHLIAFDLMYANGKSYMNEEYETRRKMLEKLLEGSTTIIPSNRIITDSS-KEMEEFFE 393
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A+V+ EG++ K D A Y R +W+K+K+ Y + D++D+ + + GRG R
Sbjct: 394 ASVENGLEGIVAK--DLKAPYIAGARKFSWIKMKRSYKGELSDTIDVAIVGYYLGRGSRA 451
Query: 665 GV-YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTIS 723
+G L A Y+ + F++I ++G+GF+E + E L SK+ + +P R +
Sbjct: 452 SFKFGGLLCAVYNKKRDMFETISRLGSGFTEKQMSEL-EELLSKIKTQAKP-ARVDSLVK 509
Query: 724 PDVWFEP 730
PD W P
Sbjct: 510 PDFWVYP 516
>gi|14520759|ref|NP_126234.1| ATP-dependent DNA ligase [Pyrococcus abyssi GE5]
gi|327507708|sp|P0CL75.1|DNLI_PYRAB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|5457975|emb|CAB49465.1| lig DNA ligase [Pyrococcus abyssi GE5]
gi|380741298|tpe|CCE69932.1| TPA: ATP-dependent DNA ligase [Pyrococcus abyssi GE5]
Length = 559
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 162/546 (29%), Positives = 269/546 (49%), Gaps = 57/546 (10%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLEL 251
+I L+ ++ + T +++ T +V + L+ V PED + + YL + P + EL
Sbjct: 3 YIELAQLYQKLEKTTMKLIKTRLVADFLKKV----PEDHLEFIPYLILGDVFPEWDEREL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLG---LVAKASRSSQSMMRKPDPLTITKV 308
G+G+ +IKA++ A G ++ ++ GDLG +A R +S +P LTI +V
Sbjct: 59 GVGEKLLIKAVSMATGIDSKEIENSVKDTGDLGESIALAVKKRKQKSFFSQP--LTIKRV 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
+ T +A+ G+ SQ+KK + L + A E +Y+ R + +R G+AE L A+
Sbjct: 117 YQTLVKVAETTGEGSQDKKMKYLANLFMDAEPIEAKYIARTVLGTMRTGVAEGLLRDAIS 176
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
A N++ L E A ++ F + KI DG+ +
Sbjct: 177 LAF-----------NVKVELVERAYMLTSDFGFVA---KIAKTEGNDGL----AKVTIQI 218
Query: 429 GIPIGPMLAKPTKGVSE-IVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERN 486
G PI PMLA+ + E ++ + EF E KYDG R Q+H +DG V IYSR E
Sbjct: 219 GKPIKPMLAQQAANIKEALLEMGGEAEF--EIKYDGARVQVH--KDGEKVTIYSRRLENV 274
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--K 544
T P++V A+ KP+ +++ E+VA E + LPFQ + R R+ ++ ++ K
Sbjct: 275 TRAIPEIVEAIKEALKPT--KAIVEGELVAIG-EDGRPLPFQYVLRRFRRKYNIEEMMEK 331
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + + FD+LY +G L+ + RR+ L + E G + A L + +++E ++F
Sbjct: 332 IPLELNLFDVLYVDGVSLIDTKFMERRKKL-EEIVETNGKVKIAENLITKNVEEAEQFYK 390
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A++ EGL+ K +D A YEP R WLK+K ++LDLV I A G G+R
Sbjct: 391 RALEMGHEGLMAKRLD--AVYEPGNRGKKWLKIKPTM-----ENLDLVIIGAEWGEGRRA 443
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
+ G+F+L YD EF + K+G+GF++ L E + L+ +I +
Sbjct: 444 HLLGSFILGAYDPETGEFLEVGKVGSGFTDDDLVEFTKMLKPLIIKEE----------GK 493
Query: 725 DVWFEP 730
VW +P
Sbjct: 494 RVWIQP 499
>gi|269926505|ref|YP_003323128.1| ATP-dependent DNA ligase I [Thermobaculum terrenum ATCC BAA-798]
gi|269790165|gb|ACZ42306.1| DNA ligase I, ATP-dependent Dnl1 [Thermobaculum terrenum ATCC
BAA-798]
Length = 583
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/550 (27%), Positives = 273/550 (49%), Gaps = 49/550 (8%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F L+ F+ + + T R + I+ ++ ++ ++ P+ YL ++AP + +E+G
Sbjct: 3 FSKLAEYFEQLDHTTSRNTLVAILADLYSQCDQS---EVRPITYLLQGRLAPFFKPIEIG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ----SMMRKPDPLTITKV 308
+G + A+ +A G HV + + +GD+G A+ + SM P T+ ++
Sbjct: 60 MGINYVADAIGKAFGVDRKHVMQVFDRVGDIGTAARQVQQEAGKELSMEETP---TVLEI 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F+ I++ +G+ S EKK +L Y+ R+ LR+G+ + T+L AL
Sbjct: 117 FNQLMAISQVSGQGSIEKKIGMFADILQKLDPRSVTYICRIPVGTLRLGVGDPTILDALS 176
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
A ++ +++ PLE A ++ I L DG+ + S P
Sbjct: 177 FAKSGDK-------SLRKPLERA-------YNETSDLGLIAETLWKDGIEGVEK-LSIMP 221
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
G P+ P LA+ I+N+ + E KYDG R Q+H + + V+I+SRN E TG
Sbjct: 222 GNPVRPALAERLPTPEAIINRMG--QCAVEKKYDGFRCQVHKIGN-EVKIFSRNLEDMTG 278
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN-VSLSDIKVDV 547
FP++ L + + + E +AY + LPFQ + R RK+ + + ++ +
Sbjct: 279 MFPEITSGT--LAMVDAETAIFEGEALAYHPLSGEFLPFQVTTKRRRKHKIEEAAQELPL 336
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
++AFDILY+NG+ L+ + RRE L ++ + E + + + +++++ + + A+
Sbjct: 337 KLFAFDILYKNGENLMGMKYVDRREILANTIKGEDSLI-VSDWVIADNVEKLMEVFNEAI 395
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV- 666
++ EG++ K +D + Y+ R+ NW+KLK+ + + D++D V + +GRGKR +
Sbjct: 396 ESGLEGIVAKRLD--SPYQAGARNFNWVKLKRTHAGQLQDTVDCVIVGYIYGRGKRAQLG 453
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYY------RFAD 720
GA L+A Y+ + + FQ+I KIGTG ++ +E V+ + +PY R
Sbjct: 454 AGALLVAVYNPDKDTFQTITKIGTGLTDEEWKE--------VVERCKPYVTEEKPARVES 505
Query: 721 TISPDVWFEP 730
I P VW EP
Sbjct: 506 IIQPSVWVEP 515
>gi|255559454|ref|XP_002520747.1| DNA ligase I, putative [Ricinus communis]
gi|223540132|gb|EEF41709.1| DNA ligase I, putative [Ricinus communis]
Length = 187
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 126/179 (70%), Gaps = 17/179 (9%)
Query: 572 EHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA--------------VDASCEGLIIK 617
++L+ S EE GF QF T L S D +EIQ+FL +A S EGL+IK
Sbjct: 2 KYLHGSLNEESGFLQFPTALISSDPEEIQQFLLSAERRLDNNGRRREKMGSDSYEGLVIK 61
Query: 618 TMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDS 677
+ DA Y P+KR +WLKLKKDY+ S+ DSLDLVPIAAF+G GKRTG+YG+FLLACYD
Sbjct: 62 KLSTDAAYVPNKR--DWLKLKKDYMASLWDSLDLVPIAAFYGCGKRTGLYGSFLLACYDY 119
Query: 678 NNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF-ADTISPDVWFEPTERPE 735
N +EFQSICK GFSE MLEE S+ LR+KVIPKP+PYYR+ AD PDVWFEP+E E
Sbjct: 120 NKDEFQSICKTAPGFSEQMLEELSARLRNKVIPKPKPYYRYNADIFKPDVWFEPSEVSE 178
>gi|406929835|gb|EKD65320.1| hypothetical protein ACD_50C00117G0002 [uncultured bacterium]
Length = 595
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 158/550 (28%), Positives = 279/550 (50%), Gaps = 31/550 (5%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+ F LS F+ + + R+ + DI+ ++ + E++ +++ +VYL +IAP E +E
Sbjct: 1 MTFAILSSYFEKLEETSSRLALIDILSDLFK---ESSKDEIDKIVYLTQGRIAPFFEPIE 57
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-KASRSSQSMMR----KPDPLTI 305
+G+ + ++ +ALA+A T+ V Y ++GD+GLVA + S++ +S++R K L++
Sbjct: 58 IGMAEKTVAQALAKAYSSTKEEVLILYGKVGDMGLVAEQLSKNQKSILRQARDKNQKLSV 117
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
++VF+ IAK +G+ + EK++ + LL ++L+R+ +R+G+ + T+L
Sbjct: 118 SEVFEILTKIAKTSGEGTVEKRQTLLSDLLKKLDPVSAKHLVRIPLGNIRLGIGDPTVLD 177
Query: 366 ALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCS 425
L +AA + PLE A ++ I L +G+ ++
Sbjct: 178 GLAKAASNAAGAKFDRTMARKPLEGA-------YNRTSDLGLIAKTLWEEGLDSVQK-LK 229
Query: 426 FTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAE 484
G PI L + ++ K + KYDG R QIH +DG+ V ++SRN E
Sbjct: 230 VQIGKPIRSELCERLPNPEKVFEKMGE-RIHATPKYDGFRVQIH--KDGNKVSMFSRNLE 286
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
T FP+++ LK+ ++ +LD E +AY +E ++ LPFQ + R RK+ L K
Sbjct: 287 NMTHMFPELIEGA--LKQVRAKTAILDTEALAYQKESEEFLPFQETTKRRRKHNILEMAK 344
Query: 545 -VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFL 603
+ + + FDILY +G+ L+ L R E L + +++ + D ++Q L
Sbjct: 345 SLPLRAFVFDILYVDGKSLIDTALVERMEILKKTVKQDDILIPSPGKILD-DPKDLQLML 403
Query: 604 DAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
+ ++ EG+++K ++ YE RS NW+KLK+ + D++D V + G+GKR
Sbjct: 404 EDSISKGLEGVVVKKT--ESPYEAGGRSFNWVKLKRHSAGELQDTIDCVILGYISGKGKR 461
Query: 664 TGV-YGAFLLACYDSNNEEFQSICKIGTGFS-EAMLEERSSSLRSKVIPKPRPYYRFADT 721
T GA L+ YD + +EF ++ KIGTG + E E + + KV KP R
Sbjct: 462 TAFGAGALLVGLYDDDKDEFVTVSKIGTGLTDEEWREIHKRADKVKVDHKP---ARVNSL 518
Query: 722 ISPDVWFEPT 731
P VW P+
Sbjct: 519 TIPSVWIRPS 528
>gi|212224666|ref|YP_002307902.1| ATP-dependent DNA ligase [Thermococcus onnurineus NA1]
gi|83338493|gb|ABC11973.1| thermostable DNA ligase [Thermococcus onnurineus NA1]
gi|212009623|gb|ACJ17005.1| thermostable DNA ligase [Thermococcus onnurineus NA1]
Length = 562
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 157/493 (31%), Positives = 255/493 (51%), Gaps = 41/493 (8%)
Query: 224 METTPEDLVPVV-YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGD 282
++ TP++L+ VV YL K+ P + ELG+G+ +IKA++ A G E ++ ++ GD
Sbjct: 33 LKKTPDELLEVVPYLILGKVFPDWDERELGVGEKLLIKAVSMATGVQEREIENSVKDTGD 92
Query: 283 LG-LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC 341
LG VA A + + PLTI +V+ TF IA+ +G+ SQ++K + + + A
Sbjct: 93 LGESVALALKKKKQKSFFSQPLTIKRVYQTFIKIAEASGEGSQDRKLKYLANIFMDAQPE 152
Query: 342 EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSV 401
E +Y+ R + +R G+AE L A+ +A +++ L E A ++ F
Sbjct: 153 EGKYIARTVLGMMRTGVAEGILRDAIAEAF-----------KVKAELVERAYMLTSDFGY 201
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
+ K+ DG+ G PI PMLA+ V E + + E E KY
Sbjct: 202 VA---KVAKLEGNDGL----GKVHIQIGKPIRPMLAQNAASVKEALLEM-GAEAAFEIKY 253
Query: 462 DGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRS--FVLDCEIVAYD 518
DG R Q+H +DG V IYSR E T P+VV A+ K S++S +++ E+VA
Sbjct: 254 DGARVQVH--KDGDRVVIYSRRLENVTRSIPEVVDAI----KASIKSEKAIVEGELVAVG 307
Query: 519 REKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYD 576
E + PFQ + R R+ ++ ++ K+ + + FD+LY +G+PL+ R RR L +
Sbjct: 308 -EGGRPRPFQYVLRRFRRKYNIEEMIEKIPLELNLFDVLYVDGEPLIDTPFRERRAKL-E 365
Query: 577 SFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLK 636
EE + A L + ++E ++F A++ EGL+ K +D + YEP R WLK
Sbjct: 366 EIVEEGEKLKLAQQLVTKKVEEAEEFYKKALELGHEGLMAKRLD--SVYEPGNRGKKWLK 423
Query: 637 LKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
+K + LDLV I A G G+R + G+FL+A YD ++ EF + K+G+GF++
Sbjct: 424 IKPTM-----EDLDLVIIGAEWGEGRRAHLLGSFLVAAYDPHSGEFVPVGKVGSGFTDED 478
Query: 697 LEERSSSLRSKVI 709
L E + L+ +I
Sbjct: 479 LVEFTKMLKPLII 491
>gi|367031348|ref|XP_003664957.1| hypothetical protein MYCTH_2308202 [Myceliophthora thermophila ATCC
42464]
gi|347012228|gb|AEO59712.1| hypothetical protein MYCTH_2308202 [Myceliophthora thermophila ATCC
42464]
Length = 547
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 150/231 (64%), Gaps = 3/231 (1%)
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGV-WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ 451
++VK ++ P Y ++P LL G+ L C T IP+ PML T+ +SE++ K Q
Sbjct: 44 ELVKASYARHPDYNDLIPVLLEIGISEELLVRCGLTLHIPLRPMLGNITRDLSEMLTKLQ 103
Query: 452 DMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLD 511
+FTCEYKYDG+RAQ+H +G V I+SR+ E T K+PD+V V +++ V SF+L+
Sbjct: 104 GRDFTCEYKYDGQRAQVHCDSNGKVSIFSRHLELMTDKYPDLVALVPKIRGEGVESFILE 163
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
E+VA DR ++ FQTL+ RARK+V++ I +DVC++AFD++Y NGQPLL + R RR
Sbjct: 164 GEVVAVDRATGELKNFQTLTNRARKDVAIGAITIDVCLFAFDLMYLNGQPLLDQPFRHRR 223
Query: 572 EHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCEGLIIKTMD 620
+ L F E P F + +L TS D + + +F +A+D+ CEG+++KT+D
Sbjct: 224 DLLRSLFVEIPHHFTWVRSLDATSQDSESVLEFFKSALDSKCEGIMVKTLD 274
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 70/127 (55%), Gaps = 14/127 (11%)
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
ATYEP KR +WLK+KKDY S D+LDL+PIAA+HG+G++ + LLA +
Sbjct: 338 ATYEPDKRLDSWLKVKKDYSSS-SDTLDLIPIAAWHGQGRKAKWWSPILLAVRNEETGCL 396
Query: 683 QSICKIGTGFSEAML----------EERSSSLRSKVIPKPRP--YYRFADTISPDVWFEP 730
+++CK +GF++A +E S R + R + +A + PDVWFEP
Sbjct: 397 EAVCKCMSGFTDAFYKANREFYDDGDEDSGVGRGRRNTHARKPGFVEYAGGV-PDVWFEP 455
Query: 731 TERPETS 737
E E +
Sbjct: 456 CEVWEVA 462
>gi|390961360|ref|YP_006425194.1| ATP-dependent DNA ligase [Thermococcus sp. CL1]
gi|390519668|gb|AFL95400.1| ATP-dependent DNA ligase [Thermococcus sp. CL1]
Length = 559
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 165/544 (30%), Positives = 264/544 (48%), Gaps = 43/544 (7%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLELGIG 254
L+ ++ + T + L T V LR TP+D++ VV YL K+ P + ELG+G
Sbjct: 6 LTELYRRLEKTTLKTLKTRFVAEFLRK----TPDDVLEVVPYLILGKVFPDWDERELGVG 61
Query: 255 DASIIKALAEACGRTESHVKKQYQEMGDLG-LVAKASRSSQSMMRKPDPLTITKVFDTFR 313
+ +IK+++ A G +E ++ ++ GDLG VA A + + PLTI +V+DTF
Sbjct: 62 EKLLIKSVSIATGVSEREIENSVKDTGDLGESVALALKKKKQRSFFSQPLTIKRVYDTFV 121
Query: 314 LIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY 373
IA+ G+ SQ++K + L + A E +YL R + +R G+AE L A+ +A
Sbjct: 122 KIAEAQGEGSQDRKMKYLANLFMDAKPEEGKYLARTVLGTMRTGVAEGILRDAIAEAFKV 181
Query: 374 NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIG 433
+ + + S AKI K +G LS G PI
Sbjct: 182 KPELVERAYMLTSDFGHVAKIAK-----------------LEGNEGLSR-VRIQVGKPIR 223
Query: 434 PMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPD 492
PMLA+ V E + + + E KYDG R Q+H +DG V IYSR E T P+
Sbjct: 224 PMLAQNAASVKEALAEMGG-KAAFEIKYDGARVQVH--KDGDRVVIYSRRLENVTRSIPE 280
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIY 550
+V AV K +++ E+VA E K PFQ + R R+ ++ ++ K+ + +
Sbjct: 281 IVRAVRESLKAE--KAIVEGELVAVG-EGGKPRPFQYVLRRFRRKYNIEEMIEKIPLELN 337
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG-FFQFATTLTSIDLDEIQKFLDAAVDA 609
FD+LY +G+ L+ RRE L + PG + A L + +E + F A++
Sbjct: 338 LFDVLYVDGEGLIDTPFSERREKLEEIIS--PGERIRLAEQLVTKSAEEAEAFYKKALEL 395
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EGL+ K +D + YEP R WLK+K + LDLV I A G G+R + G+
Sbjct: 396 GHEGLMAKRLD--SVYEPGNRGKKWLKIKPTM-----EDLDLVIIGAEWGEGRRAHLLGS 448
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
FL+A +D ++ EF + K+G+GF++ L E + L+ ++ + Y + V ++
Sbjct: 449 FLVAAFDPHSGEFVPVGKVGSGFTDEDLAEFTKMLKPLIVREEGKYVEIEPKVVIQVTYQ 508
Query: 730 PTER 733
+R
Sbjct: 509 EIQR 512
>gi|348664892|gb|EGZ04730.1| hypothetical protein PHYSODRAFT_535815 [Phytophthora sojae]
Length = 498
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 184/360 (51%), Gaps = 68/360 (18%)
Query: 429 GIPIGPMLAKPTKGVSEI---VNKFQDMEFTCEYKYDGERAQIHY-LEDGS------VEI 478
G+P+ M A P V+ + V K TCEYKYDG R Q+H D S I
Sbjct: 82 GVPVLTMSAYPVSSVAAVLERVAKSSGRTATCEYKYDGARVQVHLSFPDSSNNAGPVGRI 141
Query: 479 YSRNAERNTGKFP---DVVLAVSRLKK----PSVRSFVLDCEIVAYDREKQKILPFQTLS 531
+SRN E T +F DV+ +K S S +++ E+VA DRE PFQ L
Sbjct: 142 FSRNMEDVTERFSSLLDVLRQCMEHRKTRGLSSAPSLIVEGELVAMDRETGTFCPFQVLQ 201
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
T+ + C++ FD+L +G LLQ LR RR L+D EE+ G+ +F +
Sbjct: 202 TKT---------TTEFCLFLFDLLAVDGTNLLQNPLRKRRALLHDLLEEKAGYVEF---V 249
Query: 592 TSIDLDE------------IQKFLDAAVDASCEGLIIKTMD-RDATYEPSKRSLNWLKLK 638
ID+ ++ +L+ AV + CEGL+IK +D ++ Y+ +RS +W+KLK
Sbjct: 250 KHIDISAEDGAEEQEQATVVRDYLEQAVASGCEGLMIKALDDEESEYKAGRRSYSWMKLK 309
Query: 639 KDYIES---------------------IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDS 677
DY+ + D+LDLVPI AFHG+G+R GV+G+FL+A Y+S
Sbjct: 310 HDYLSDEVATSTSSKKKSAANTGNGTFLADTLDLVPIGAFHGKGRRAGVFGSFLMAAYNS 369
Query: 678 NNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK----PRPYYRFA-DTISPDVWFEPTE 732
+ +F++I K+GTGFS+A + E L+ V+P+ P Y A + PDVW P E
Sbjct: 370 TSGKFETIGKVGTGFSDAQMTEAGGRLQMHVLPETNGVPEQYQSSAIRSRHPDVWLSPEE 429
>gi|14591397|ref|NP_143476.1| ATP-dependent DNA ligase [Pyrococcus horikoshii OT3]
gi|6225280|sp|O59288.1|DNLI_PYRHO RecName: Full=Probable thermostable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|3258051|dbj|BAA30734.1| 559aa long hypothetical DNA ligase [Pyrococcus horikoshii OT3]
Length = 559
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 265/525 (50%), Gaps = 47/525 (8%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLEL 251
+I L+ ++ + T +++ T +V + L+ V PED + + YL + P + EL
Sbjct: 3 YIELAQLYQKLEKTTMKLIKTRLVADFLKRV----PEDHLDFIPYLILGDVFPEWDEREL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLG---LVAKASRSSQSMMRKPDPLTITKV 308
G+G+ +IKA++ A G ++ ++ GDLG +A R +S +P LTI +V
Sbjct: 59 GVGEKLLIKAVSMATGVDPKEIENSVKDTGDLGESIALAIKRRKQKSFFSQP--LTIKRV 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
+ T IA+ G+ SQEKK + L + A E +YL R + +R G+AE L A+
Sbjct: 117 YQTLVKIAETTGEGSQEKKMKYLANLFMDAEPLEAKYLARTVLGTMRTGVAEGLLRDAIA 176
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
A +++ L E A ++ F + KI A +G+ +
Sbjct: 177 LAF-----------HVKVELVERAYMLTSDFGFVA---KIAKAEGNEGL----EKVTIQL 218
Query: 429 GIPIGPMLAKPTKGVSE-IVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERN 486
G PI PMLA+ + E ++ + EF E KYDG R Q+H +DG V IYSR E
Sbjct: 219 GKPIKPMLAQQAANIKEALLEMGGEAEF--EIKYDGARVQVH--KDGEKVIIYSRRLENV 274
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--K 544
T P++V A+ +P +++ E+VA E+ + LPFQ + R R+ ++ ++ K
Sbjct: 275 TRAIPEIVEAIKEAIEPE--KVIVEGELVAIG-EEGRPLPFQYVLRRFRRKHNIEEMMKK 331
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + + FD+LY +G+ + + RR+ L + + G + A L + + +E +KF
Sbjct: 332 IPLELNLFDVLYVDGKSFVDTKFIERRKKL-EEIVKPNGKIKVAENLITKNAEEAEKFYK 390
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A++ EGL+ K +D A YEP R WLK+K ++LDLV I A G G+R
Sbjct: 391 RALEMGHEGLMAKRLD--AVYEPGNRGKKWLKIKPTM-----ENLDLVIIGAEWGEGRRA 443
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
++G+F+L YD EF + K+G+GF++ L E + L+ ++
Sbjct: 444 HLFGSFILGAYDPETGEFLEVGKVGSGFTDDDLVEFTKMLKPLIV 488
>gi|14423675|sp|Q9HH07.1|DNLI_THEFM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|12056098|emb|CAC21199.1| DNA ligase [Thermococcus fumicolans]
Length = 559
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 163/550 (29%), Positives = 273/550 (49%), Gaps = 46/550 (8%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLELGIG 254
L+ ++ + T + L T V + L+ V P++L+ +V YL K+ P + ELG+G
Sbjct: 6 LAGLYRRLEKTTLKTLKTRFVADFLKNV----PDELLEIVPYLILGKVFPDWDERELGVG 61
Query: 255 DASIIKALAEACGRTESHVKKQYQEMGDLG-LVAKASRSSQSMMRKPDPLTITKVFDTFR 313
+ +IKA++ A G E ++ ++ GDLG +A A + + PLTI +V+DTF
Sbjct: 62 EKLLIKAVSIATGVPEGEIENSIKDTGDLGESIALAVKKKKQKSFFSQPLTIKRVYDTFV 121
Query: 314 LIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY 373
+A+ G+ SQ++K + L + A E +Y+ R + +R G+AE L A+ +A
Sbjct: 122 KVAESQGEGSQDRKMKYLANLFMDAQPEEAKYIARTVLGTMRTGVAEGILRDAIAEAF-- 179
Query: 374 NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIG 433
+++ L E A ++ F + K+ +G LS G P+
Sbjct: 180 ---------KVKAELVERAYMLTSDFGYVTKVAKL------EGNEGLSK-VRIQVGKPVR 223
Query: 434 PMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPD 492
PMLA+ V + + + E E KYDG R Q+H +DG V IYSR E T P+
Sbjct: 224 PMLAQNAASVKDALLEMGG-EAAFEIKYDGARVQVH--KDGDRVVIYSRRLENVTRSIPE 280
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIY 550
+V AV +P +++ E+VA + K PFQ + R R+ ++ ++ ++ + +
Sbjct: 281 IVEAVRSQLRPE--KAIVEGELVAVG-DGGKPRPFQYVLRRFRRKYNIEEMIERIPLELN 337
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
FD+LY +G+ L+ RR+ L ++ EE + A L + +E ++F A++
Sbjct: 338 LFDVLYVDGESLVDTPFMERRKRLEEAVEESERI-KLAQQLVTKKAEEAEEFYRRALELG 396
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
EGL+ K +D + YEP R WLK+K + LDLV I A G G+R + G+F
Sbjct: 397 HEGLMAKRLD--SVYEPGNRGKKWLKIKPTM-----EDLDLVIIGAEWGEGRRAHLLGSF 449
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
L+A YD + EF + K+G+GF++ L E + L+ ++ + Y I P V +
Sbjct: 450 LVAAYDQHRGEFVPVGKVGSGFTDEDLAEFTKMLKPLIVREEGKYV----EIEPRVVIQV 505
Query: 731 TERPETSNSP 740
T + E SP
Sbjct: 506 TYQ-EIQKSP 514
>gi|406957617|gb|EKD85515.1| hypothetical protein ACD_38C00007G0001 [uncultured bacterium]
Length = 612
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 159/574 (27%), Positives = 262/574 (45%), Gaps = 64/574 (11%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F L+ F+ + + R+L+ DI+ + R E E++ V YL ++AP +E LE+G
Sbjct: 3 FSKLAEYFEKLEATSSRLLLIDILTELFR---EIKTEEIGKVSYLIQGRVAPFYEPLEMG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--------SRS------------ 292
+ + ++ ++A+A G V K+Y ++GDLGLV + RS
Sbjct: 60 MAEKTVAASIAKAYGIGREEVLKEYGKVGDLGLVVQQLSDIKCHPERSEGSQDSKSKSRD 119
Query: 293 ------SQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYL 346
+Q + + D L +++VF IAK G+ + EKK+ + LL ++L
Sbjct: 120 SSPPTATQLLADRNDKLNVSQVFHILTQIAKTTGEGTVEKKQQLLVGLLKQMDAVSAKHL 179
Query: 347 IRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYE 406
+R+ R+G+ + T+L A + + + K LE V +
Sbjct: 180 VRIPLGVSRLGIGDPTILDAFAKLKLGDRSKRKL-------LEGGYNRVSDL-------- 224
Query: 407 KIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
++ L G G PI LA+ ++ K E + K DG R
Sbjct: 225 GLIGETLWQGGLEAVEKLEIQVGRPIRSQLAERLPSGKTVIEKLG--EVNAQRKLDGFRV 282
Query: 467 QIHY-------LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR 519
QIH + +V ++SRN E T FP++ A +K+ +S +LDCE + Y+
Sbjct: 283 QIHIDRRQSSAVSHQTVRLFSRNLEETTPMFPEI--AEGAIKQIKAKSAILDCEAIGYNP 340
Query: 520 EKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
+ LPFQ + R RK ++ K+ + + FDILY++G L+ L R + L
Sbjct: 341 ASDEFLPFQETTQRRRKYGIAEMTKKIPLRAFCFDILYKDGISLIDLPLTERLKELKAVV 400
Query: 579 EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638
+ + S + +Q LD A+ EGL++K D+ YE R+ NW+KLK
Sbjct: 401 ADGDTLVVEEGEMVS-EAQRLQDLLDEAISLGLEGLVVKR--PDSKYEAGARNFNWVKLK 457
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRTGV-YGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ + D++D V + G+GKR+G G+ L+ YD +EF ++ KIGTG S+
Sbjct: 458 RHSSGELKDTIDCVILGYIFGKGKRSGFGAGSLLVGVYDDKKDEFVTVSKIGTGLSDE-- 515
Query: 698 EERSSSLRS-KVIPKPRPYYRFADTISPDVWFEP 730
E R ++S K+ K +P R I P VW EP
Sbjct: 516 EWRGIEVKSQKLKVKSKP-ARVNSLIIPSVWVEP 548
>gi|242221818|ref|XP_002476649.1| predicted protein [Postia placenta Mad-698-R]
gi|220724080|gb|EED78152.1| predicted protein [Postia placenta Mad-698-R]
Length = 372
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 117/307 (38%), Positives = 175/307 (57%), Gaps = 18/307 (5%)
Query: 455 FTCEYKYDGERAQIHYLEDG----SVEIYSRNAERNTGKFPDVVLAVSRL--KKPSVRSF 508
FT E+KYDG+RAQIH +DG +V+I+SR+ E T K+PD+VL V + +P V+SF
Sbjct: 2 FTAEFKYDGQRAQIHASKDGDLRVNVKIFSRHLEDMTDKYPDIVLLVQGIFRSRPEVQSF 61
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLR 568
++D EI A + I FQ LS RARK+V + +IKV VC++AFD++ +G+ LL+ R
Sbjct: 62 IIDAEIAAINPVDGSIKTFQELSNRARKDVKVDEIKVPVCVFAFDLMCLDGEILLERSFR 121
Query: 569 VRREHLYDSF------EEEPGFFQFATTLTSIDLDE-IQKFLDAAVDASCEGLIIKTMDR 621
RR L + F ++ F + S D E I++F A+++SCEGL+IK R
Sbjct: 122 QRRALLRERFPPLHPERKDAARFDHVQSCESEDGREAIEEFWQTALNSSCEGLMIKVSAR 181
Query: 622 DATYE-----PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYD 676
+ + P KR+ WLKLKKDY+ +GDSLDLVPI A+HG G++ + LLA D
Sbjct: 182 LSDRQVDMILPDKRTSAWLKLKKDYVTGLGDSLDLVPIGAWHGNGRKARWWSPILLAVRD 241
Query: 677 SNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPET 736
+ + ++CK +G +L E S + R + + P+V+F+P E E
Sbjct: 242 PDTGKLVAVCKCMSGKRSHLLMEYQMSNERTIHRVLRCLLQGTLGLRPEVFFKPQEVWEI 301
Query: 737 SNSPASI 743
+ +I
Sbjct: 302 RGADITI 308
>gi|238611291|ref|XP_002397933.1| hypothetical protein MPER_01556 [Moniliophthora perniciosa FA553]
gi|215473430|gb|EEB98863.1| hypothetical protein MPER_01556 [Moniliophthora perniciosa FA553]
Length = 178
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
+PFQ LS R RK+V + DI+V VC++AFD+LY NG+PLL + L RR+ L + F+ P
Sbjct: 1 MPFQELSKRKRKDVKVEDIQVRVCLFAFDLLYLNGEPLLHKPLTERRKLLQEHFQTVPFE 60
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATY-EPSKRSLNWLKLKKDYIE 643
FQFA + S ++IQ FL+ +V CEGL++K ++ DA+Y EPS+RS+NWLKLKKDY+
Sbjct: 61 FQFAKSSDSEATEDIQTFLEESVKDGCEGLMVKMLESDASYYEPSRRSVNWLKLKKDYLA 120
Query: 644 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
+GDSLDLV + ++G+GKR VYGAFLLACY +N +ICKIGTGFS L+
Sbjct: 121 GVGDSLDLVVVGGYYGKGKRANVYGAFLLACYHANAAVSLTICKIGTGFSGLALQ 175
>gi|401882096|gb|EJT46369.1| DNA ligase [Trichosporon asahii var. asahii CBS 2479]
Length = 826
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 164/567 (28%), Positives = 252/567 (44%), Gaps = 100/567 (17%)
Query: 264 EACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDS 323
E G +K+ Y + GD G VA ++++ + +P PL V+ +A G S
Sbjct: 254 EVSGLQARDLKRLYIKSGDPGDVAFEAKTNVRTLVQPAPLIAYDVYARLLRLADIKGVQS 313
Query: 324 QEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGL--------AEQTLLAALGQAAVYNE 375
++K + I+ LLV A E +YLI ++ L L A LL+ + +
Sbjct: 314 GKQKTDIIRRLLVQARGEEVRYLIGAVRLTLLTALARAAALHEAPSELLSRVQPQPEKKK 373
Query: 376 QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPM 435
+++ +AA +V++ + P Y + +L G+ L + GIPI PM
Sbjct: 374 VVDPAREEVEALCADAAALVRRTYVRHPNYGDLSAGVLQ-GLEGLEECVPLSVGIPISPM 432
Query: 436 LAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-------------------V 476
L T+ + E+ ++ + FT E K DG+R Q+H DG V
Sbjct: 433 LGSITRSLDEVYDRLGTLPFTAEAKLDGQRLQMHVRVDGPKEQDSKGGKWVERDGRRAWV 492
Query: 477 EIYSRNAERNTGKFPDVVL---------------------------AVSRLKKPSVRSFV 509
++SR+ E T K+PD+ L A+ L+ P V S +
Sbjct: 493 RLFSRHLEDMTEKYPDICLTALELTKDLTHKRKPFPDDGFSEPSAAAMELLETPRVTSLI 552
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
+D EIVA D+ + FQ L+ RA+K+V + DIKV V I AFD++ N PLL L
Sbjct: 553 IDAEIVAIDKVTGEKRTFQELTNRAKKDVRVEDIKVVVDICAFDLMLINDVPLLSVPLIH 612
Query: 570 RREHLYDSF----EEEPGFFQFATTLTSIDLDE------IQKFLDAAVDASCEGLIIKTM 619
RR L E+P F +F + + +ID + ++ F D V+ EGL++K +
Sbjct: 613 RRHLLRQLLRPVRSEDPHFARF-SHIENIDSNNLPDQAALRSFFDKVVEQKAEGLMVKLL 671
Query: 620 DRD------------------------------ATYEPSKRSLNWLKLKKDYIESIGDSL 649
D ATYEP +RS WLK+KKDY+E +GDSL
Sbjct: 672 DTGITETTEVIEVEEPADGIKVEEKISRKKALPATYEPDQRSAGWLKVKKDYLEGLGDSL 731
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM---LEERSSSLRS 706
DLVPI A+ G G++ G + LLA + + +++CK +GF++A L R S
Sbjct: 732 DLVPIGAWWGNGRKAGWWSPILLAARNPESGALEAVCKCMSGFTDAFYKNLIARYPPEGS 791
Query: 707 KVIPKPRPY-YRFADTISPDVWFEPTE 732
P Y + P +WFEP E
Sbjct: 792 DATSTDAPLGYVETGGLVPSIWFEPKE 818
>gi|410479410|ref|YP_006767047.1| DNA ligase [Leptospirillum ferriphilum ML-04]
gi|424867234|ref|ZP_18291042.1| DNA ligase [Leptospirillum sp. Group II 'C75']
gi|124515294|gb|EAY56804.1| DNA ligase [Leptospirillum rubarum]
gi|387222269|gb|EIJ76727.1| DNA ligase [Leptospirillum sp. Group II 'C75']
gi|406774662|gb|AFS54087.1| DNA ligase [Leptospirillum ferriphilum ML-04]
Length = 602
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 157/542 (28%), Positives = 257/542 (47%), Gaps = 51/542 (9%)
Query: 207 TGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEAC 266
TGRI + + + L ++E PE P +YL ++AP G E G+ +++A+ A
Sbjct: 19 TGRIEMAQEMGSFL-GILEN-PER-APFIYLVQGQLAPPFRGGETGMSTKLVLRAIGLAV 75
Query: 267 GRTE----SHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKD 322
+ E S +K+ +E+GD+G + + S R+ + L VF T +A G+
Sbjct: 76 EKAEIPLTSSPEKKLEELGDMGNLVEHLFSG----RQGESLPFLDVFQTLENLALRGGEG 131
Query: 323 SQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP 382
SQE+K + L + + +++ R + KLR+G+ + T++ AL H +
Sbjct: 132 SQEEKIRELATLFLKISPLSSRFVARFVVGKLRLGVGDATIIDALA--------HWQGGK 183
Query: 383 NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKG 442
+ +SP+E + + +I L ++G+ + +PG PI L +
Sbjct: 184 SAKSPIENGYNLCSDL-------GRIATLLGSEGL-DAVRQLRPSPGFPIRMALCERLSS 235
Query: 443 VSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLK 501
+I K E KYDG R Q+H DG+ ++I+SRN E T FP++V L
Sbjct: 236 GEDIFEKIGPC--AVESKYDGFRCQVH--TDGTNIQIFSRNLEETTAMFPEIVEGTRALF 291
Query: 502 KPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQ 560
R+ + + E + Y+ E PFQ TR RK NV +V + + FD++Y +G+
Sbjct: 292 GE--RTAIFEGEALGYNAETGGYHPFQVTITRKRKHNVKQKSDEVPLKMLVFDLMYLDGE 349
Query: 561 PLLQEQLRVRREHLYDSF--------EEE---PGFFQFATTLTSIDLDEIQKFLDAAVDA 609
L RR + F EEE G F + + + I F D ++
Sbjct: 350 SWLDVPFLERRHKMESLFPTRMFSVEEEELAPSGVFGTSRLIMADHPSTIDLFFDEVLEE 409
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV-YG 668
EG+I K ++ TY R+ NW+KLK+ Y +++ D+LDLV I + G+G+RT + G
Sbjct: 410 GFEGIIAKR--KEGTYTAGSRNFNWIKLKRSYKDALSDTLDLVIIGFYRGKGQRTRLGIG 467
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
A L A YD ++F SI +IG+G +EA L +P+ RP +D I P+ W
Sbjct: 468 AILTAAYDREQDKFVSIARIGSGLTEAQWITLREMLEESTLPE-RPPSVLSD-IQPEYWV 525
Query: 729 EP 730
EP
Sbjct: 526 EP 527
>gi|170181043|gb|ACB11498.1| putative DNA ligase [Pinus sylvestris]
Length = 168
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/120 (74%), Positives = 103/120 (85%)
Query: 624 TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
TYEP+KRS NWLKLKKDY++SIGDSLDLVPI AF GRGKRTGVYGAFLLACYD + EEFQ
Sbjct: 1 TYEPAKRSNNWLKLKKDYMDSIGDSLDLVPIGAFLGRGKRTGVYGAFLLACYDEDTEEFQ 60
Query: 684 SICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
S+CKIGTGF+E MLE+RS SLR+KVIPKP+PYYR+ +T+ DVWFEP+E E + SI
Sbjct: 61 SVCKIGTGFTEVMLEQRSDSLRNKVIPKPKPYYRYGETLGVDVWFEPSEVWEVKAADLSI 120
>gi|389852928|ref|YP_006355162.1| ATP-dependent DNA ligase [Pyrococcus sp. ST04]
gi|388250234|gb|AFK23087.1| ATP-dependent DNA ligase [Pyrococcus sp. ST04]
Length = 559
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 159/546 (29%), Positives = 271/546 (49%), Gaps = 57/546 (10%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLEL 251
++ L+ ++ + T +++ T +V + L+ V P+D + + YL + P + EL
Sbjct: 3 YLELAQLYQKLEKTTMKLIKTRLVADFLKKV----PDDHLEFIPYLILGDVFPEWDEREL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLG---LVAKASRSSQSMMRKPDPLTITKV 308
G+G+ +IKA+A A G + ++ ++ GDLG +A R +S +P LTI +V
Sbjct: 59 GVGEKLLIKAVAMATGIDANEIENSVKDTGDLGESIALAVKKRKQKSFFSQP--LTIKRV 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
+ T +A+ G+ SQEKK + L + A E +Y+ R + +R G+AE L A+
Sbjct: 117 YQTLVKVAETTGEGSQEKKMKYLANLFMDAEPIEAKYIARTVLGTMRTGVAEGLLRDAIA 176
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
A +++ L E A ++ F + K+ +G L+
Sbjct: 177 LAF-----------HVKVELVERAYMLTSDFGFVAKVAKL------EGNEGLAK-VQVQI 218
Query: 429 GIPIGPMLAKPTKGVSE-IVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERN 486
G PI PMLA+ + E ++ + EF E KYDG R Q+H +DG + +YSR E
Sbjct: 219 GKPIKPMLAQQAANIKEALLEMGGEAEF--EIKYDGARVQVH--KDGDKIIVYSRRLENV 274
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--K 544
T P++V A+ + KP+ +++ E+VA E + LPFQ + R R+ ++ ++ K
Sbjct: 275 TRAIPEIVEALKQSVKPN--KAIVEGELVAIG-EDGRPLPFQYVLRRFRRKHNIQEMMKK 331
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + + FD+LY +G+ ++ + RR+ L + E G + A L + ++E + F
Sbjct: 332 IPLELNLFDVLYVDGESMIDVKFIDRRKKLEEIIEPN-GKIKVAENLITKKVEEAEAFYK 390
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A++ EGL+ K +D ATYEP R WLK+K ++LDLV I A G G+R
Sbjct: 391 KALEMGHEGLMAKRLD--ATYEPGNRGKKWLKIKPTM-----ENLDLVIIGAEWGEGRRA 443
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
+ G+F+L YD EF + K+G+GF++ L E + L+ +I +
Sbjct: 444 HLLGSFILGAYDPETGEFLEVGKVGSGFTDEDLVEFTKMLKPLIIKEE----------GK 493
Query: 725 DVWFEP 730
VW EP
Sbjct: 494 RVWIEP 499
>gi|206601597|gb|EDZ38080.1| DNA ligase [Leptospirillum sp. Group II '5-way CG']
Length = 603
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 159/542 (29%), Positives = 258/542 (47%), Gaps = 51/542 (9%)
Query: 207 TGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEAC 266
TGRI + + + L ++E PE P +YL ++AP G E G+ +++A+ A
Sbjct: 19 TGRIEMAQEMGSFL-GILEN-PER-APFIYLVQGQLAPPFRGGETGMSTKLVLRAIGLAL 75
Query: 267 GRTE----SHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKD 322
+ E S +K+ +E+GD+G + + S R+ + L VF T +A G+
Sbjct: 76 EKAEIPLTSSPEKKLEELGDMGNLVEHLFSG----RQGESLPFLDVFQTLENLALRGGEG 131
Query: 323 SQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP 382
SQE+K + L + + +++ R + KLR+G+ + T++ AL A + +KPP
Sbjct: 132 SQEEKIRELATLFLKISPLSSRFVARFVVGKLRLGVGDATIIDAL--AHWQGGKPAKPP- 188
Query: 383 NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKG 442
++ +++ +I L +DG+ + +PG PI L +
Sbjct: 189 ------------IENGYNLCSDLGRIATLLGSDGL-DAVRQLRPSPGFPIRMALCERLSS 235
Query: 443 VSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLK 501
EI K E KYDG R Q+H DG+ V+I+SRN E T FP++V L
Sbjct: 236 GEEIFEKIGPC--AVESKYDGFRCQVH--TDGTNVQIFSRNLEETTTMFPEIVEGTRALF 291
Query: 502 KPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQ 560
R+ + + E + Y+ E PFQ TR RK NV +V + + FD++Y +G+
Sbjct: 292 --GNRTAIFEGEALGYNAETGGYHPFQVTITRKRKHNVKEKSDEVPLKMLVFDLMYLDGE 349
Query: 561 PLLQEQLRVRREHLYDSF--------EEE---PGFFQFATTLTSIDLDEIQKFLDAAVDA 609
L RR + F EEE G F + + + I F D ++
Sbjct: 350 SWLDFPFLERRRKMESLFPTRIFSVEEEETAPSGVFGTSRLVMADHPSTIDLFFDEVLEE 409
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV-YG 668
EG+I K ++ Y R+ NW+KLK+ Y +++ D+LDLV I + G+G+RT + G
Sbjct: 410 GFEGIIAKR--KEGAYTAGSRNFNWIKLKRSYKDTLSDTLDLVIIGFYRGKGQRTRLGIG 467
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
A L A YD ++F SI +IG+G +EA + L +P+ RP +D I P+ W
Sbjct: 468 AILTAAYDREQDKFVSIARIGSGLTEAQWITLRAMLEESTLPQ-RPPSVLSD-IQPEYWV 525
Query: 729 EP 730
EP
Sbjct: 526 EP 527
>gi|406997386|gb|EKE15470.1| hypothetical protein ACD_12C00007G0006 [uncultured bacterium]
Length = 586
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 153/564 (27%), Positives = 272/564 (48%), Gaps = 67/564 (11%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
LS F+ I + R+ IT I+ + + + + +++ VVYL ++ PA+EG++ G+ +
Sbjct: 6 LSRYFEKIEKNSSRLEITRILAELFKLL---SAQEIAKVVYLLQGRVGPAYEGIDFGMAE 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLI 315
+IIKA A + +K++++ GDLG ++ + + + + + + V+D F +
Sbjct: 63 RTIIKASMLALNIDRGYFEKEFKKSGDLGTTVESFKKLYTSFEEKE-MEVLVVYDFFYRL 121
Query: 316 AKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE 375
A G SQE K + + L+ +YL+RL +R+G ++ T+L A + + E
Sbjct: 122 ATATGNGSQEVKTSLLSQLIRQLDPRSGRYLVRLPTGIIRLGFSDMTILDAY--SWMLKE 179
Query: 376 QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT--CSFTPGIPIG 433
S P I++ + V P I L G+ L FT PI
Sbjct: 180 DKSLRP------------IIETAYHVRPDLGFIGKTLKEKGINGLKEIEPTVFT---PII 224
Query: 434 PMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY----------LEDGSVEIYSRNA 483
M A+ SEI+ Q + E K+DG R Q+HY + +V+++SR+
Sbjct: 225 MMKAERMSSASEIIK--QIGKCLVEPKFDGFRLQVHYKKIKKQKSKIKDQETVKLFSRSL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSD 542
E T +PD+V V K+ +++ E + Y+ + + LPFQ R RK ++
Sbjct: 283 EDVTYMYPDIVDGVK--KEVKADELIIEGEAIGYNPKTGEFLPFQETVQRKRKYDIGAKA 340
Query: 543 IKVDVCIYAFDILYRNGQPLLQ----------EQLRVRREHLYDSFEEEPGFFQFATTLT 592
I+V + ++AF++LY NG+ ++ EQ+ ++ +++ +
Sbjct: 341 IEVPLKLFAFELLYLNGKNFIKLPFIERRKALEQVTIKNKNISEQ-------IIIVDHQE 393
Query: 593 SIDLDE-IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
+D +E +++ D A+ EG+I K + D Y+P R NW+K K+ Y I D++D
Sbjct: 394 EVDKEERLEEIFDQAIAKKLEGVIAKKI--DGIYQPGARGWNWIKYKRSYSSKINDTIDC 451
Query: 652 VPIAAFHGRGKRTGV-YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE---RSSSLRSK 707
+ + G+GKRT GAFL+ YD N++F ++ KIGTG ++ +E +SS L+ K
Sbjct: 452 LVMGYDFGKGKRTDFGMGAFLVGVYDHKNDKFVTVAKIGTGLTDVEWKELKIKSSELKIK 511
Query: 708 VIPKPRPYYRFADTISP-DVWFEP 730
KP Y D ++ D+W P
Sbjct: 512 --NKPDNY--LVDKMAQCDIWITP 531
>gi|332157848|ref|YP_004423127.1| ATP-dependent DNA ligase [Pyrococcus sp. NA2]
gi|331033311|gb|AEC51123.1| ATP-dependent DNA ligase [Pyrococcus sp. NA2]
Length = 559
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 268/546 (49%), Gaps = 57/546 (10%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLEL 251
++ L+ ++ + T +++ T +V + L+ V PED + + YL + P + EL
Sbjct: 3 YLELAQLYQKLEKTTMKLIKTRLVADFLKKV----PEDHLDFIPYLILGDVFPEWDEREL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLG---LVAKASRSSQSMMRKPDPLTITKV 308
G+G+ +I+A++ A G ++ ++ GDLG +A R +S +P LTI +V
Sbjct: 59 GVGEKLLIRAVSMATGVDPQEIENSVKDTGDLGESIALAVKKRKQRSFFSQP--LTIKRV 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
+ T +A+ G+ SQEKK + L + A E +Y+ R + +R G+AE L A+
Sbjct: 117 YQTLVKVAETTGEGSQEKKMKYLANLFMDAEPIEAKYIARTVLGTMRTGVAEGLLRDAIA 176
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
A +++ L E A ++ F + KI A +G+ + +
Sbjct: 177 LAF-----------HVKVELVERAYMLTSDFGFVA---KIAKAEGNEGL----SKVTIQL 218
Query: 429 GIPIGPMLAKPTKGVSE-IVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERN 486
G PI PMLA+ + E ++ + EF E KYDG R Q+H +DG+ V +YSR E
Sbjct: 219 GKPIKPMLAQQAANIKEALLEMGGEAEF--EIKYDGARVQVH--KDGNKVIVYSRRLENV 274
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--K 544
T P++V A+ K +++ E+VA E + LPFQ + R R+ ++ ++ K
Sbjct: 275 TRAIPEIVEAIRSAIKAE--RAIVEGELVAIG-ENGRPLPFQYVLRRFRRKHNIEEMMKK 331
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + + FD+LY +G + + RRE L + E G + A L + ++E ++F
Sbjct: 332 IPLELNLFDVLYVDGTSYIDTEFIKRRETL-ERIVEPNGKIKIAENLITRKVEEAEEFYK 390
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A++ EGL+ K +D A YEP R WLK+K ++LDLV I A G G+R
Sbjct: 391 RALEMGHEGLMAKRLD--AVYEPGNRGKKWLKIKPTM-----ENLDLVIIGAEWGEGRRA 443
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
+ G+F+L YD EF + K+G+GF++ L E + L+ +I +
Sbjct: 444 HLLGSFILGAYDPETGEFVEVGKVGSGFTDDDLLEFTKMLKPLIIKEE----------GK 493
Query: 725 DVWFEP 730
VW +P
Sbjct: 494 RVWVQP 499
>gi|341582659|ref|YP_004763151.1| ATP-dependent DNA ligase [Thermococcus sp. 4557]
gi|340810317|gb|AEK73474.1| ATP-dependent DNA ligase [Thermococcus sp. 4557]
Length = 559
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 159/522 (30%), Positives = 259/522 (49%), Gaps = 42/522 (8%)
Query: 224 METTPEDLVPVV-YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGD 282
++ P++L+ ++ YL K+ P + ELG+G+ +IKA++ A G E ++ ++ GD
Sbjct: 30 LKKAPDELLDIIPYLILGKVFPDWDERELGVGEKLLIKAVSMATGVPEREIENSVRDTGD 89
Query: 283 LG-LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC 341
LG VA A + + PLTI +V+DTF IA+ +G+ SQ++K + L + A
Sbjct: 90 LGESVALALKKKKQKSFFSQPLTIKRVYDTFMKIAEASGQGSQDRKLKYLANLFMDAQPE 149
Query: 342 EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSV 401
E +YL R + +R G+AE + A+ A +++ L E A ++ F
Sbjct: 150 EGKYLARTVLGTMRTGVAEGLMRDAIASAF-----------GVKAELVERAYMLTSDFGY 198
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
+ K+ +G LS G PI PMLA+ V E + + + E KY
Sbjct: 199 VARVAKL------EGNEGLSK-VRIQVGKPIRPMLAQNAANVKEALVEMGG-KAAFEVKY 250
Query: 462 DGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDRE 520
DG R Q+H +DG V IYSR E T P+VV AV KP +++ E+VA E
Sbjct: 251 DGARVQVH--KDGDRVVIYSRRLENVTRSIPEVVDAVLESVKPE--KAIVEGELVAVG-E 305
Query: 521 KQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
K PFQ + R R+ ++ ++ K+ + + FD+LY +G ++ RR+ L +
Sbjct: 306 GGKPRPFQYVLRRFRRKYNIEEMVEKIPLELNLFDVLYVDGDGMIDTPFSERRKKLEEII 365
Query: 579 EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638
+ + A L + DE ++F A++ EGL+ K +D + YEP R WLK+K
Sbjct: 366 SQNERI-RLAEQLVTTSADEAEEFYQRALELGHEGLMAKRLD--SVYEPGNRGKKWLKIK 422
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
+ LDLV I A G G+R + G+FL+A +D ++ EF + K+G+GF++ L
Sbjct: 423 PTM-----EDLDLVIIGAEWGEGRRAHLLGSFLVAAFDPHSGEFVPVGKVGSGFTDEDLA 477
Query: 699 ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSP 740
E + L+ ++ + Y I P V + T + E SP
Sbjct: 478 EFTRMLKPLIVREEGKYV----EIEPKVVIQVTYQ-EIQKSP 514
>gi|57642075|ref|YP_184553.1| ATP-dependent DNA ligase [Thermococcus kodakarensis KOD1]
gi|10566815|dbj|BAB15949.1| DNA ligase [Thermococcus kodakaraensis]
gi|57160399|dbj|BAD86329.1| ATP-dependent DNA ligase [Thermococcus kodakarensis KOD1]
Length = 562
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 249/491 (50%), Gaps = 37/491 (7%)
Query: 224 METTPEDLVPVV-YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGD 282
++ TP++L+ +V YL K+ P + ELG+G+ +IKA++ A G E ++ ++ GD
Sbjct: 33 LKKTPDELLEIVPYLILGKVFPDWDERELGVGEKLLIKAVSMATGVPEKEIEDSVRDTGD 92
Query: 283 LG-LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC 341
LG VA A + + PLTI +V+DTF IA+ G+ SQ++K + L + A
Sbjct: 93 LGESVALAIKKKKQKSFFSQPLTIKRVYDTFVKIAEAQGEGSQDRKMKYLANLFMDAEPE 152
Query: 342 EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSV 401
E +YL R + +R G+AE L A+ +A + + + S AKI K
Sbjct: 153 EGKYLARTVLGTMRTGVAEGILRDAIAEAFRVKPELVERAYMLTSDFGYVAKIAK----- 207
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
+G LS G PI PMLA+ V + + + E E KY
Sbjct: 208 ------------LEGNEGLSK-VRIQIGKPIRPMLAQNAASVKDALIEMGG-EAAFEIKY 253
Query: 462 DGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDRE 520
DG R Q+H +DG V +YSR E T P+V+ A+ KP +++ E+VA E
Sbjct: 254 DGARVQVH--KDGDKVIVYSRRLENVTRSIPEVIEAIKAALKPE--KAIVEGELVAVG-E 308
Query: 521 KQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
+ PFQ + R R+ ++ ++ K+ + + FD+++ +G+ L++ + RR L +
Sbjct: 309 NGRPRPFQYVLRRFRRKYNIDEMIEKIPLELNLFDVMFVDGESLIETKFIDRRNKLEEIV 368
Query: 579 EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638
+E + A L + ++E + F A++ EGL+ K +D + YEP R WLK+K
Sbjct: 369 KESEKI-KLAEQLITKKVEEAEAFYRRALELGHEGLMAKRLD--SIYEPGNRGKKWLKIK 425
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
++LDLV I A G G+R + G+FL+A YD ++ EF + K+G+GF++ L
Sbjct: 426 PTM-----ENLDLVIIGAEWGEGRRAHLLGSFLVAAYDPHSGEFLPVGKVGSGFTDEDLV 480
Query: 699 ERSSSLRSKVI 709
E + L+ ++
Sbjct: 481 EFTKMLKPYIV 491
>gi|14423676|sp|Q9HHC4.2|DNLI_PYRKO RecName: Full=DNA ligase; AltName: Full=Lig(Tk); AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
Length = 559
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 249/491 (50%), Gaps = 37/491 (7%)
Query: 224 METTPEDLVPVV-YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGD 282
++ TP++L+ +V YL K+ P + ELG+G+ +IKA++ A G E ++ ++ GD
Sbjct: 30 LKKTPDELLEIVPYLILGKVFPDWDERELGVGEKLLIKAVSMATGVPEKEIEDSVRDTGD 89
Query: 283 LGL-VAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC 341
LG VA A + + PLTI +V+DTF IA+ G+ SQ++K + L + A
Sbjct: 90 LGESVALAIKKKKQKSFFSQPLTIKRVYDTFVKIAEAQGEGSQDRKMKYLANLFMDAEPE 149
Query: 342 EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSV 401
E +YL R + +R G+AE L A+ +A + + + S AKI K
Sbjct: 150 EGKYLARTVLGTMRTGVAEGILRDAIAEAFRVKPELVERAYMLTSDFGYVAKIAK----- 204
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
+G LS G PI PMLA+ V + + + E E KY
Sbjct: 205 ------------LEGNEGLSK-VRIQIGKPIRPMLAQNAASVKDALIEMGG-EAAFEIKY 250
Query: 462 DGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDRE 520
DG R Q+H +DG V +YSR E T P+V+ A+ KP +++ E+VA E
Sbjct: 251 DGARVQVH--KDGDKVIVYSRRLENVTRSIPEVIEAIKAALKPE--KAIVEGELVAVG-E 305
Query: 521 KQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
+ PFQ + R R+ ++ ++ K+ + + FD+++ +G+ L++ + RR L +
Sbjct: 306 NGRPRPFQYVLRRFRRKYNIDEMIEKIPLELNLFDVMFVDGESLIETKFIDRRNKLEEIV 365
Query: 579 EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638
+E + A L + ++E + F A++ EGL+ K +D + YEP R WLK+K
Sbjct: 366 KESEKI-KLAEQLITKKVEEAEAFYRRALELGHEGLMAKRLD--SIYEPGNRGKKWLKIK 422
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
++LDLV I A G G+R + G+FL+A YD ++ EF + K+G+GF++ L
Sbjct: 423 PTM-----ENLDLVIIGAEWGEGRRAHLLGSFLVAAYDPHSGEFLPVGKVGSGFTDEDLV 477
Query: 699 ERSSSLRSKVI 709
E + L+ ++
Sbjct: 478 EFTKMLKPYIV 488
>gi|406919253|gb|EKD57597.1| hypothetical protein ACD_57C00219G0003 [uncultured bacterium]
Length = 582
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 144/540 (26%), Positives = 268/540 (49%), Gaps = 35/540 (6%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ ++ + + R+ + DI+ + + E E++ + YL ++AP E +E+G+ +
Sbjct: 6 LAEYYEKLEATSKRLELVDILSKLFK---EAKAEEIGKICYLIQGRVAPFFEPVEIGMAE 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLI 315
+ + +++ A +++ V K Y+ G++G+ A A S+ + L++T+VF+ I
Sbjct: 63 SMVAQSIGRAFNKSKDEVIKLYRHKGNMGIAA-AQLSTNAKRLTTKALSVTEVFEELAKI 121
Query: 316 AKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE 375
AK +GK + E+K + + +L + ++++ + LR+G+ + T+L AL A ++
Sbjct: 122 AKFSGKGTVEQKVSTLAQVLKSLDSTSVKHVVNIPLGTLRLGIGDPTVLDALSIAKTGDK 181
Query: 376 QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPM 435
+ ++ LE A + V + + A + + G PI P
Sbjct: 182 K-------LRPMLEGAYNKTSDLGYVAENFFRKGEAGI--------RSVKLIIGKPIRPA 226
Query: 436 LAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVV 494
LA+ E V + EF E K+DG R +H ++G+ +E++SRN E T FPD+V
Sbjct: 227 LAERLPNAEEAVKRLGG-EFAAEPKFDGFRVAVH--KNGNKIELFSRNLEDMTHAFPDLV 283
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFD 553
+K+ ++ +L+ E +AY+ ++ LPFQ + R RK + ++ + ++AFD
Sbjct: 284 EGA--VKEVKAKTAILEGEAIAYNPVTEEFLPFQETTKRRRKYKIEEMAKQLPLVLFAFD 341
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEG 613
+LY NG+ + ++ RR+ L + + A T EI KF + + EG
Sbjct: 342 LLYLNGKDITEKPYWQRRKLLESIIHSDNKVVRLAQERTLHTAQEITKFFNEEISEGLEG 401
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT--GVYGAFL 671
L++K + ++ Y R +W+K K+ + DS+D V + + GRGKRT GV G L
Sbjct: 402 LMLKKL--NSPYVAGGRGFHWIKFKRSQAGELTDSVDCVLLGVYSGRGKRTEFGV-GGLL 458
Query: 672 LACYDSNNEEFQSICKIGTGFS-EAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
+ YD+ +EF +I ++GTG + E + + S + +V KP R I P W EP
Sbjct: 459 VGIYDAKRDEFVTISRVGTGLTDEEFRKVKVISDKLQVAKKP---ARVNSKIEPSFWVEP 515
>gi|18978007|ref|NP_579364.1| ATP-dependent DNA ligase [Pyrococcus furiosus DSM 3638]
gi|397652716|ref|YP_006493297.1| ATP-dependent DNA ligase [Pyrococcus furiosus COM1]
gi|6225279|sp|P56709.1|DNLI_PYRFU RecName: Full=DNA ligase; AltName: Full=Pfu DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|18893788|gb|AAL81759.1| DNA ligase (lig) [Pyrococcus furiosus DSM 3638]
gi|393190307|gb|AFN05005.1| ATP-dependent DNA ligase [Pyrococcus furiosus COM1]
Length = 561
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 268/544 (49%), Gaps = 53/544 (9%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLEL 251
++ L+ ++ + T +++ T +V + L+ V P+D + + YL ++ P + EL
Sbjct: 3 YLELAQLYQKLEKTTMKLIKTRLVADFLKKV----PDDHLEFIPYLILGEVFPEWDEREL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLG-LVAKASRSSQSMMRKPDPLTITKVFD 310
G+G+ +IKA+A A G +++ ++ GDLG +A A + + PLTI +V+
Sbjct: 59 GVGEKLLIKAVAMATGIDAKEIEESVKDTGDLGESIALAVKKKKQKSFFSQPLTIKRVYQ 118
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
T +A+ G+ SQ+KK + L + A E +YL R + +R G+AE L A+ A
Sbjct: 119 TLVKVAETTGEGSQDKKVKYLADLFMDAEPLEAKYLARTILGTMRTGVAEGLLRDAIAMA 178
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
+++ L E A ++ F + K+ +G L+ G
Sbjct: 179 F-----------HVKVELVERAYMLTSDFGYVAKIAKL------EGNEGLAK-VQVQLGK 220
Query: 431 PIGPMLAKPTKGVSE-IVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTG 488
PI PMLA+ + + ++ + EF E KYDG R Q+H +DGS + +YSR E T
Sbjct: 221 PIKPMLAQQAASIRDALLEMGGEAEF--EIKYDGARVQVH--KDGSKIIVYSRRLENVTR 276
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVD 546
P++V A+ P +++ E+VA E + LPFQ + R R+ ++ ++ K+
Sbjct: 277 AIPEIVEALKEAIIPE--KAIVEGELVAIG-ENGRPLPFQYVLRRFRRKHNIEEMMEKIP 333
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
+ + FD+LY +GQ L+ + RR L + ++ + A L + ++E + F A
Sbjct: 334 LELNLFDVLYVDGQSLIDTKFIDRRRTLEEIIKQNEKI-KVAENLITKKVEEAEAFYKRA 392
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
++ EGL+ K +D A YEP R WLK+K ++LDLV I A G G+R +
Sbjct: 393 LEMGHEGLMAKRLD--AVYEPGNRGKKWLKIKPTM-----ENLDLVIIGAEWGEGRRAHL 445
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
+G+F+L YD EF + K+G+GF++ L E + L+ +I + V
Sbjct: 446 FGSFILGAYDPETGEFLEVGKVGSGFTDDDLVEFTKMLKPLIIKEE----------GKRV 495
Query: 727 WFEP 730
W +P
Sbjct: 496 WLQP 499
>gi|315231717|ref|YP_004072153.1| ATP-dependent DNA ligase [Thermococcus barophilus MP]
gi|315184745|gb|ADT84930.1| ATP-dependent DNA ligase [Thermococcus barophilus MP]
Length = 561
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 170/552 (30%), Positives = 271/552 (49%), Gaps = 49/552 (8%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ ++ + T + L T V + L+ V + ++VP YL K+ P + ELG+G+
Sbjct: 6 LAELYRRLEKTTLKTLKTRFVADFLKKVEDEELLEIVP--YLILGKVFPDWDERELGVGE 63
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLG---LVAKASRSSQSMMRKPDPLTITKVFDTF 312
+IKA+A A G ++ ++ GDLG +A R +S +P LTI +V+ T
Sbjct: 64 KLLIKAVAMATGINAEWIENSVKDTGDLGESVALALQKRKQRSFFGQP--LTIKRVYKTL 121
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
+A+ G+ SQ++K + L + A E +YL R + +R G+AE L A+ +A
Sbjct: 122 VKVAETTGEGSQDRKLKYLANLFMDAEPIEGKYLARTILGTMRTGVAEGLLRDAIAEAF- 180
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
++ L E A ++ F + K+ +G LS + G PI
Sbjct: 181 ----------RVKPELVERAYMLTSDFGFVTKIAKL------EGNEGLSK-VTIQIGKPI 223
Query: 433 GPMLAKPTKGVSE-IVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKF 490
PMLA+ V E +V + EF E KYDG R Q+H +DG V IYSR E T
Sbjct: 224 KPMLAQMAANVREALVEMGGEAEF--EIKYDGARVQVH--KDGDKVIIYSRRLENVTKSI 279
Query: 491 PDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVC 548
P+VV + + KP +++ E+VA E + PFQ + R R+ ++ ++ K+ +
Sbjct: 280 PEVVERIKKSIKPE--KAIVEGELVAVG-EGGRPRPFQYVLRRFRRKYNIQEMIEKIPLE 336
Query: 549 IYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVD 608
+ FD+LY +G+ L+ RR+ L +S E + + A L + +E ++F A+D
Sbjct: 337 LNLFDVLYVDGENLIDTPFIERRKKL-ESIVEVNQWIKVAENLITKSPEEAEEFYHKALD 395
Query: 609 ASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
EGL+ K + D+ YEP R WLK+K ++LDLV I A G G+R V
Sbjct: 396 MGHEGLMAKRL--DSVYEPGNRGKKWLKIKPTM-----ENLDLVIIGAEWGEGRRAHVLS 448
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
+FLL YD F + K+G+GF++ L E + L+ +I K + +F + I P V
Sbjct: 449 SFLLGAYDPGTGTFVPVGKVGSGFTDEDLVEFTKMLKP-LIKKEKG--KFVE-IEPKVVI 504
Query: 729 EPTERPETSNSP 740
E T + E SP
Sbjct: 505 EVTYQ-EIQKSP 515
>gi|20094435|ref|NP_614282.1| ATP-dependent DNA ligase [Methanopyrus kandleri AV19]
gi|22256753|sp|Q8TWN3.1|DNLI_METKA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|19887522|gb|AAM02212.1| ATP-dependent DNA ligase [Methanopyrus kandleri AV19]
Length = 559
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 159/544 (29%), Positives = 254/544 (46%), Gaps = 40/544 (7%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYL-AANKIAPAHEGLELGIG 254
L+ F+ + + R ++ LR PED+V V L AN++ P + +LGIG
Sbjct: 6 LAEAFERLERISSRKAKISLIAQFLRQ----CPEDVVDTVALFLANQVFPGWDPRDLGIG 61
Query: 255 DASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFDTF 312
+ K +A A G T+S V + ++ +GDLGL A+ R S + PL + +V +TF
Sbjct: 62 SKLMRKVIATATGSTDSEVTELFKRLGDLGLTAEELLKRRKTSTLLDSRPLMVGEVRETF 121
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
IA+ G+ + ++K + LL A E +YL+R S+LR G+ E T+ A+ QA
Sbjct: 122 EKIAEVEGEGAVKRKMRLMMGLLARAKPKEARYLVRQALSELRTGVRESTVEEAIAQAFG 181
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
+ + + + + L AK+ +T G L P PI
Sbjct: 182 VSRKLVERAHMLSNDLGLVAKVA-----------------MTKGEEGLRE-IDLRPMRPI 223
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFP 491
PMLA+ + V E + + + E K DG R Q+H DG V +Y+R E T P
Sbjct: 224 KPMLAQAARNVKEALAEVGG-KGAVEIKLDGARVQVH--SDGEEVRVYTRRIEDVTHALP 280
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCI 549
D+V AV F+L+ E VA + E K PFQ L R ++ + +++ + V +
Sbjct: 281 DIVEAVKDCVDAD--EFILEGEAVAINPETGKPRPFQELLHRIKRKYDIEEVRKEIPVEL 338
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+ FD LY +G+ L+ R RR L + E G + + D E + A++
Sbjct: 339 HLFDCLYVDGESLVDTPFRERRRRLEEIVREREGEVMLVEQVITDDPKEAAEMFHRALEM 398
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EG+++K D DA Y P R LK+K + ++LD V I G+GKR G+ G+
Sbjct: 399 GHEGVMVK--DLDANYTPGVRGKKMLKVK-----PVLETLDCVVIGGIWGKGKRKGLIGS 451
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
+LLA +D N E + K+GTG + LE + ++ + RF + +V FE
Sbjct: 452 YLLAVWDENKENLLEVGKVGTGMDDETLERLTKMFEDLIVEESGREVRFKPEVVFEVEFE 511
Query: 730 PTER 733
++
Sbjct: 512 DIQK 515
>gi|288930432|ref|YP_003434492.1| DNA ligase I, ATP-dependent Dnl1 [Ferroglobus placidus DSM 10642]
gi|288892680|gb|ADC64217.1| DNA ligase I, ATP-dependent Dnl1 [Ferroglobus placidus DSM 10642]
Length = 555
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 247/474 (52%), Gaps = 39/474 (8%)
Query: 229 EDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA- 287
+DL V++ +I P + E+G+G I +AL + G ++S +++ +E GDLGL A
Sbjct: 38 DDLYNVIHFLMGRIFPPWDEREIGVGVGLIYEALRQVTGVSKSRIEQLVKETGDLGLAAE 97
Query: 288 KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLI 347
+ + + + LTI +V + F +AK +G+ SQ+++ + L V+AT E +YL
Sbjct: 98 RLLKEKKQTTLFQEELTIKRVKEIFEEMAKLSGEGSQKRRVMLLTDLYVSATPIETRYLT 157
Query: 348 RLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK 407
RL+ ++R+G+ E + A+ +A I S + E A ++ + + V K
Sbjct: 158 RLILGEMRLGVGEGIIRDAIARAF-----------GIDSSIVERAYMLTNDYGRVAVVAK 206
Query: 408 IVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQ 467
DG+ + + P+ MLA+ + V E + + + E E+KYDG R Q
Sbjct: 207 KEG---KDGLMRMKIQLHY----PVKMMLAQVAESVDEALREMR--EAAVEWKYDGSRVQ 257
Query: 468 IHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
+HY +G V I+SR E T P++V V + + +V +LD E++A + K +PF
Sbjct: 258 VHY-GNGKVTIFSRRLENVTSALPEIVDEVKKCVRENV---ILDGEVIAV--KDGKPMPF 311
Query: 528 QTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFF 585
Q + R R+ +S ++ + +Y FDILY +G+ L+ L+ RR+ L + E
Sbjct: 312 QQVLRRFRRKHEISKAMERIPLIVYFFDILY-DGEMLIDLPLKERRKKLEEVIGESE-II 369
Query: 586 QFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESI 645
+ A + + D +++ + A++A EGL++K + D+ Y P KR WLKLK ++
Sbjct: 370 KVAQQVITSDPKVVEEEFNRAIEAGHEGLMLKRL--DSPYTPGKRGKLWLKLK-----AV 422
Query: 646 GDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
++LDLV + G GKR+ + +F LAC D N + + K+ TGF++ LEE
Sbjct: 423 METLDLVVVGGEWGEGKRSHLLSSFELACRDENGRLLR-VGKVATGFTDEDLEE 475
>gi|424813986|ref|ZP_18239164.1| DNA ligase I, ATP-dependent, dnl1 [Candidatus Nanosalina sp.
J07AB43]
gi|339757602|gb|EGQ42859.1| DNA ligase I, ATP-dependent, dnl1 [Candidatus Nanosalina sp.
J07AB43]
Length = 563
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 245/501 (48%), Gaps = 49/501 (9%)
Query: 219 MLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQ 278
+L + + EDL VV L+ + P+ + ++LG+ +++K ++ A GR+E + + ++
Sbjct: 31 ILAELFSGSGEDLQEVVLLSTGQPFPSWKNMDLGVSSKTLVKIISRASGRSEDEITRVWK 90
Query: 279 EMGDLGLVAKA---SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKD-----SQEKKKNR 330
GDLG A+ +++ Q +M K LT+ V + + +AK K Q+KK++
Sbjct: 91 NEGDLGDAAEQMVDNKTQQRLMSK--ELTVENVVERLQKVAKMEAKGLSQSVDQDKKQSE 148
Query: 331 IKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV--YNEQHSKPPPNIQSPL 388
+ LL +A E +YL R++ + LR+G+AE T+ AL +A N Q + + +
Sbjct: 149 LADLLSSADPVEARYLARIIINNLRLGVAEGTIRDALSEAFFDGENTQEIQRAYDFSNDF 208
Query: 389 EEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVN 448
E +K +Q + + P+ MLAK + E
Sbjct: 209 SEVSKACRQGLDAV-------------------KSIELQLNRPVNSMLAKKVNTIEE--- 246
Query: 449 KFQDME--FTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
F+++ + +YKYDG RAQIH + DG +++++R E T +FPDVV V +
Sbjct: 247 GFEEVGRPASVDYKYDGMRAQIH-VNDGDIKVFTRRLEDVTKQFPDVVSQVE--ENIDSD 303
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDILYRNGQPLLQ 564
+ +LD EIV YD E ++PFQ LS R ++ + +K + V + FD++Y P+L+
Sbjct: 304 NCILDTEIVGYDPEDGSMIPFQKLSKRIKRKYEIQKLKEQIPVTVRPFDLIYLE-TPILE 362
Query: 565 EQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDAT 624
R ++L D E + + + +++Q+ ++ EG+++K + DA
Sbjct: 363 RPYSERWDNLRDIVSESEDDLKLVDHKKTENPEQVQEMQQRSLSQGHEGIMMKNL--DAE 420
Query: 625 YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQS 684
Y+P R +KLK + ++LDL + A G+R+ G + CYD N +Q
Sbjct: 421 YKPGNRVGYMVKLK-----PVMETLDLAIVGAKWSEGRRSDWLGRLFIGCYDEENGTYQE 475
Query: 685 ICKIGTGFSEAMLEERSSSLR 705
I K+ TG ++ +E + L+
Sbjct: 476 IGKMATGLTDEQFQEITEKLK 496
>gi|242398869|ref|YP_002994293.1| DNA ligase [Thermococcus sibiricus MM 739]
gi|242265262|gb|ACS89944.1| DNA ligase [Thermococcus sibiricus MM 739]
Length = 560
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 249/498 (50%), Gaps = 44/498 (8%)
Query: 215 IVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVK 274
V + L++V PE L + YL K+ P + ELGIG+ +IKA++ A G ++
Sbjct: 25 FVSDFLKSV--EKPELLEVIPYLILGKVFPDWDERELGIGEKLLIKAVSMATGINSEEIE 82
Query: 275 KQYQEMGDLG---LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRI 331
++ GDLG +A R +S +P LTI +V++T IA+ +G SQ++K +
Sbjct: 83 NSVRDTGDLGESIALALNKRKQKSFFSQP--LTIERVYNTLVKIAEASGAGSQDRKLKYL 140
Query: 332 KALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEA 391
L + A+ E +YL R + +R G+AE L AL A ++ L E
Sbjct: 141 ANLFMDASPDEGKYLARTVLGIMRTGVAEGLLRDALADAF-----------KVRVELVER 189
Query: 392 AKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSE-IVNKF 450
A ++ F + K+ +G L+ G PI PMLA+ V E +V
Sbjct: 190 AYMLTSDFGFVAKVAKL------EGDEGLAK-VKIQVGKPIKPMLAQMAANVREALVEMG 242
Query: 451 QDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
+ EF E KYDG R Q+H ++G+ V IYSR E T P+VV V KP +
Sbjct: 243 GEAEF--EIKYDGARVQVH--KNGNKVLIYSRRLENVTKSIPEVVERVKEALKPE--KVI 296
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQL 567
++ E+VA + E + PFQ + R R+ ++ ++ K+ + + FDILY +GQ ++
Sbjct: 297 VEGELVAVE-ETGRPRPFQYVLRRFRRKYNIEEMIEKIPLELNLFDILYVDGQNMIDTPF 355
Query: 568 RVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEP 627
RR+ L +S + + A L + +E + F A+D EGL+ K +D +TYEP
Sbjct: 356 MERRKVL-ESVVNSNEWIKSAENLITKSPEEAEAFYHKALDLGHEGLMAKRLD--STYEP 412
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
R WLK+K ++LDLV + A G G+R+GV +FLL YD +F + K
Sbjct: 413 GNRGKKWLKIKPTM-----ENLDLVVLGAEWGEGRRSGVLSSFLLGAYDPVKGDFVPVGK 467
Query: 688 IGTGFSEAMLEERSSSLR 705
+G+GF++ L E + L+
Sbjct: 468 VGSGFTDEDLVEFTKMLK 485
>gi|435851818|ref|YP_007313404.1| ATP-dependent DNA ligase I [Methanomethylovorans hollandica DSM
15978]
gi|433662448|gb|AGB49874.1| ATP-dependent DNA ligase I [Methanomethylovorans hollandica DSM
15978]
Length = 561
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 159/554 (28%), Positives = 258/554 (46%), Gaps = 45/554 (8%)
Query: 202 MISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKA 261
+I G + +T +V + V T E+L V + ++ PA E+G+G ++ A
Sbjct: 13 VIEETAGSLDMTALVAELFSLV---TSEELPVVTHFVMGEVFPAWSDEEVGLGTGILLNA 69
Query: 262 LAEACGRTESHVKKQYQEMGD--------LGLVAKASRSSQSMMRKPDPLTITKVFDTFR 313
L+++ G ++ +E GD LG ++K + S + P L+I +V++ F+
Sbjct: 70 LSKSSGLPVKEIEDVVRETGDIGKTTVKVLGKISKGQATFSSFLDSPVELSIMEVYERFK 129
Query: 314 LIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY 373
IA GK SQ + ++ L +A+ + Y+ RL +RIG+ E + A+ +A
Sbjct: 130 DIAHATGKGSQTSRIKHLQYLFNSASAEDVGYIARLAIEDMRIGVGEGIVRDAIAKA--- 186
Query: 374 NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIG 433
E V++ F +L IV +G G PI
Sbjct: 187 --------------FEVPVASVERGF-MLTNDMGIVAVTAKEGGDEALLELGLQIGRPIK 231
Query: 434 PMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDV 493
MLA+ T + + + + E+K+DG R QIH D V +YSR E TG PD+
Sbjct: 232 LMLAQVTPDIETAIRELGVV--AAEWKFDGARVQIHKKGD-EVILYSRRLENITGSLPDI 288
Query: 494 VLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYA 551
V +V R K S +LD E VA D E + PFQ + R R+ + + + + +
Sbjct: 289 VSSVKRAVKAD--SAILDGEAVAID-ENGRPKPFQEILKRLRRKHDVQNKVRHIPLILNL 345
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASC 611
FDI+Y +G+ L++ L+ RRE L S E + + + L + DL +I+ + A+ A
Sbjct: 346 FDIMYLDGESLIELPLQKRREFLVASVENDD-LVRVDSQLITSDLSQIENMYEQALSAGH 404
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
EG++IK + + Y P KR NWLK KK +E+ LDLV I A G G+RT G++
Sbjct: 405 EGIMIK--NPASPYSPGKRGKNWLK-KKPVMET----LDLVVIGAEWGYGRRTSFLGSYA 457
Query: 672 LACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
LAC+D + +F + K+ TG S+ L E + R VI I +V FE
Sbjct: 458 LACHDPDTGQFLPVGKVATGISDEQLAELTEMFREHVISGSGTSVEIRPHILFEVAFEEI 517
Query: 732 ERPETSNSPASIVY 745
++ S ++ +
Sbjct: 518 QKSTNYESGYALRF 531
>gi|386783456|pdb|4EQ5|A Chain A, Dna Ligase From The Archaeon Thermococcus Sibiricus
Length = 571
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 249/498 (50%), Gaps = 44/498 (8%)
Query: 215 IVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVK 274
V + L++V PE L + YL K+ P + ELGIG+ +IKA++ A G ++
Sbjct: 36 FVSDFLKSV--EKPELLEVIPYLILGKVFPDWDERELGIGEKLLIKAVSMATGINSEEIE 93
Query: 275 KQYQEMGDLG---LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRI 331
++ GDLG +A R +S +P LTI +V++T IA+ +G SQ++K +
Sbjct: 94 NSVRDTGDLGESIALALNKRKQKSFFSQP--LTIERVYNTLVKIAEASGAGSQDRKLKYL 151
Query: 332 KALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEA 391
L + A+ E +YL R + +R G+AE L AL A ++ L E
Sbjct: 152 ANLFMDASPDEGKYLARTVLGIMRTGVAEGLLRDALADAF-----------KVRVELVER 200
Query: 392 AKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSE-IVNKF 450
A ++ F + K+ +G L+ G PI PMLA+ V E +V
Sbjct: 201 AYMLTSDFGFVAKVAKL------EGDEGLAK-VKIQVGKPIKPMLAQMAANVREALVEMG 253
Query: 451 QDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
+ EF E KYDG R Q+H ++G+ V IYSR E T P+VV V KP +
Sbjct: 254 GEAEF--EIKYDGARVQVH--KNGNKVLIYSRRLENVTKSIPEVVERVKEALKPE--KVI 307
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQL 567
++ E+VA + E + PFQ + R R+ ++ ++ K+ + + FDILY +GQ ++
Sbjct: 308 VEGELVAVE-ETGRPRPFQYVLRRFRRKYNIEEMIEKIPLELNLFDILYVDGQNMIDTPF 366
Query: 568 RVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEP 627
RR+ L +S + + A L + +E + F A+D EGL+ K +D +TYEP
Sbjct: 367 MERRKVL-ESVVNSNEWIKSAENLITKSPEEAEAFYHKALDLGHEGLMAKRLD--STYEP 423
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
R WLK+K ++LDLV + A G G+R+GV +FLL YD +F + K
Sbjct: 424 GNRGKKWLKIKPTM-----ENLDLVVLGAEWGEGRRSGVLSSFLLGAYDPVKGDFVPVGK 478
Query: 688 IGTGFSEAMLEERSSSLR 705
+G+GF++ L E + L+
Sbjct: 479 VGSGFTDEDLVEFTKMLK 496
>gi|284161662|ref|YP_003400285.1| ATP-dependent DNA ligase I [Archaeoglobus profundus DSM 5631]
gi|284011659|gb|ADB57612.1| DNA ligase I, ATP-dependent Dnl1 [Archaeoglobus profundus DSM 5631]
Length = 555
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 266/527 (50%), Gaps = 44/527 (8%)
Query: 212 ITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES 271
+T + + LR + + +DL VV+ ++ P + ELG+G + KAL G ++
Sbjct: 22 MTGRIASFLRRIED--DDDLYNVVHFLMGRVFPPWDERELGVGIGLVCKALENVSGVSKE 79
Query: 272 HVKKQYQEMGDLGLVAK---ASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKK 328
++ ++ GDLGLVA+ R +S+ + LTI +V + F IA G+ SQ++K
Sbjct: 80 KIESMIKDYGDLGLVAERLLKGRGIKSLF--AEELTIKRVREIFDEIASLEGEGSQKRKI 137
Query: 329 NRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPL 388
+ L +A+ E +YL RL+ ++R+G+ E + A+ +A +
Sbjct: 138 LLLTGLYGSASPIEARYLTRLILGEMRLGVGEGIMRDAIARAWGVD-------------- 183
Query: 389 EEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVN 448
A++V++ + ++ ++ +G L N IP+ MLA+ + + + +
Sbjct: 184 ---AELVERAYMIVNDLGRVAIIAKNEGKEGLKN-VKIQLHIPVKMMLAQVAESIEQALR 239
Query: 449 KFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSF 508
+ + + E+KYDG R Q+HY +G V IYSR E T P++V + + K V
Sbjct: 240 EMKTI--AVEWKYDGSRVQVHY-GNGKVTIYSRRLENVTKALPEIVEEIKKCVKEGV--- 293
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQ 566
+LD E++A + K +PFQ + R R+ ++ K+ + Y FDILY +G+ ++
Sbjct: 294 ILDGEVIAV--KDGKPMPFQEVLRRFRRKHEITKAMEKIPLEAYFFDILYNDGE-VIDLP 350
Query: 567 LRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYE 626
L+ RR+ L +S +E + A + + +EI++ A+DA EG ++K + ++ Y
Sbjct: 351 LKERRKIL-ESVIKESKIIKIAKQVVTNKKEEIERVFKEALDAGHEGAMLK--NPNSPYT 407
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
P KR +WLKLK+ + ++LDLV + G G+R+ + +F LAC D + I
Sbjct: 408 PGKRGRHWLKLKE-----VMETLDLVVVGGEWGEGRRSHLISSFELACLDPRTGKLLRIG 462
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTER 733
++GTGF++ LEE + + ++ + F I +V ++ ++
Sbjct: 463 QVGTGFTDEDLEELTELFKPLIVKEEGKKVYFKPKIVFEVAYQEIQK 509
>gi|261403774|ref|YP_003247998.1| ATP-dependent DNA ligase I [Methanocaldococcus vulcanius M7]
gi|261370767|gb|ACX73516.1| DNA ligase I, ATP-dependent Dnl1 [Methanocaldococcus vulcanius M7]
Length = 573
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 156/520 (30%), Positives = 247/520 (47%), Gaps = 54/520 (10%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMET-TPEDLVPVVYLAANKIAPAHEGLELGIGDAS 257
+FD I N T R+ D ++ V E PEDL + Y+A ++ P ++ ELGIG+
Sbjct: 9 IFDKIENTTKRLEKRDYFIKLIDLVKEKGKPEDLKKICYMAIGRVYPEYDERELGIGEKL 68
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLGLVAKASRS-SQSMMRKPDPLTITKVFDTFRLIA 316
+I A+ + G + + ++ +E GD+G + +S ++ + PLT+ V++T + +
Sbjct: 69 LINAIT-SMGIKKEELLEKIKETGDIGFAVEQLKSKTKQLSLLLSPLTVDDVYETLKRVG 127
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
+ G+ SQ+KK I +L + A+ E +YL RL+ +R+G+ T+L AL +VY
Sbjct: 128 EIEGEGSQKKKLRLISSLFMRASPIECRYLARLILEDMRLGMNVPTILDAL---SVY--- 181
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
P E+ KI + + EK++ L S PI PML
Sbjct: 182 -------FNVPKEKLEKIYAITNDIGLLAEKLIKNELE------SEDLKLKLFRPIKPML 228
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
A+ + E + + +F E KYDG R QIH D V+IYSR E T P++V A
Sbjct: 229 AQLAPSIEEALLEMGKAQF--ETKYDGARVQIHKGGD-KVKIYSRRLEDVTNALPEIVDA 285
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDI 554
+ KK +V +++ E VA D++ K PFQ + R R+ + + ++++ +Y FDI
Sbjct: 286 I---KKINVEELIVEGECVAIDKQTGKPRPFQDILRRFRRKYDIGKMMKEINLRVYLFDI 342
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGF----------------FQFATTLTSIDLDE 598
LY+NG L+ E+ RR+ L D E + + L S D E
Sbjct: 343 LYKNGTSLIDEEFEKRRKELEDIVGYENDWRTERERIERELKSDKIVDISYKLVSDDPKE 402
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFH 658
++F + ++ EG++IK + A Y P R K K +SLD+V A
Sbjct: 403 AREFYNWSLSIGHEGVMIKNL--KAPYTPGSRVRTMYKFKPTL-----ESLDVVITKAKR 455
Query: 659 GRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
G GKR YG+F + C I +GTG SEA LE
Sbjct: 456 GMGKRKDWYGSFEI-CVKDEEGNLYPIGYVGTGLSEADLE 494
>gi|112490160|pdb|2CFM|A Chain A, Atp-Dependent Dna Ligase From Pyrococcus Furiosus
Length = 561
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 258/544 (47%), Gaps = 53/544 (9%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLEL 251
++ L+ ++ + T +++ T +V + L+ V P+D + + YL ++ P + EL
Sbjct: 3 YLELAQLYQKLEKTTXKLIKTRLVADFLKKV----PDDHLEFIPYLILGEVFPEWDEREL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGL-VAKASRSSQSMMRKPDPLTITKVFD 310
G+G+ +IKA+A A G +++ ++ GDLG +A A + + PLTI +V+
Sbjct: 59 GVGEKLLIKAVAXATGIDAKEIEESVKDTGDLGESIALAVKKKKQKSFFSQPLTIKRVYQ 118
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
T +A+ G+ SQ+KK + L A E +YL R + R G+AE L A+ A
Sbjct: 119 TLVKVAETTGEGSQDKKVKYLADLFXDAEPLEAKYLARTILGTXRTGVAEGLLRDAIAXA 178
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
+ + + S AKI K +G L+ G
Sbjct: 179 FHVKVELVERAYXLTSDFGYVAKIAK-----------------LEGNEGLAK-VQVQLGK 220
Query: 431 PIGPMLAKPTKGVSE-IVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTG 488
PI P LA+ + + ++ + EF E KYDG R Q+H +DGS + +YSR E T
Sbjct: 221 PIKPXLAQQAASIRDALLEXGGEAEF--EIKYDGARVQVH--KDGSKIIVYSRRLENVTR 276
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVD 546
P++V A+ P +++ E+VA E + LPFQ + R R+ N+ K+
Sbjct: 277 AIPEIVEALKEAIIPE--KAIVEGELVAIG-ENGRPLPFQYVLRRFRRKHNIEEXXEKIP 333
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
+ + FD+LY +GQ L+ + RR L + ++ + A L + ++E + F A
Sbjct: 334 LELNLFDVLYVDGQSLIDTKFIDRRRTLEEIIKQNEKI-KVAENLITKKVEEAEAFYKRA 392
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
++ EGL K +D A YEP R WLK+K ++LDLV I A G G+R +
Sbjct: 393 LEXGHEGLXAKRLD--AVYEPGNRGKKWLKIK-----PTXENLDLVIIGAEWGEGRRAHL 445
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
+G+F+L YD EF + K+G+GF++ L E + L+ +I + V
Sbjct: 446 FGSFILGAYDPETGEFLEVGKVGSGFTDDDLVEFTKXLKPLIIKEE----------GKRV 495
Query: 727 WFEP 730
W +P
Sbjct: 496 WLQP 499
>gi|383320642|ref|YP_005381483.1| DNA ligase I [Methanocella conradii HZ254]
gi|379322012|gb|AFD00965.1| DNA ligase I, ATP-dependent (dnl1) [Methanocella conradii HZ254]
Length = 583
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 156/537 (29%), Positives = 255/537 (47%), Gaps = 44/537 (8%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
VF+ + R+ T I+ + ++ V P+++ VV ++ P + ++GI +I
Sbjct: 17 VFEKLKKTQSRLEKTAIIADFIKNV---PPDEMPVVVTFLIGRVFPLWDERKIGIAGQTI 73
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFDTFRLIA 316
IK ++ +ES V + Y+ G LG+ A+ R Q+M + D LT+ V TF IA
Sbjct: 74 IKVISSITYNSESKVIESYKRTGHLGITAEEMFQRRRQAMFFEADELTVMDVNRTFAEIA 133
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
++AG S KK+ + LL AT E +Y++ L + G E + A+ +A + +
Sbjct: 134 RQAGAGSAAKKQKLLIGLLHRATPKEAEYIVSLAIEYVLSGAKEGVMEEAIAKAFGVDVE 193
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
+ + S L E A++ + +G L S P P+ PML
Sbjct: 194 LVRRANMLTSDLGETARVA-----------------MLEGERGLKG-ISIRPMRPVRPML 235
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
A+ + E + E KYDG R Q+H L D V +YSR E T P++V
Sbjct: 236 AQNVASIQEALEVLGG-RADFETKYDGARLQVHKLGD-QVRLYSRRLENLTEALPEIV-- 291
Query: 497 VSRLKKPSVR--SFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVCIYAF 552
R K SV+ S +LDCE +A D + + +PFQ + TR R+ V ++ + + F
Sbjct: 292 --RYVKQSVKADSVILDCECIATDPKTGRPVPFQNILTRLRRIYKVEETEKLFPLFLRPF 349
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCE 612
DILY NG+ ++ RR L + + AT L + ++E Q+ D ++ E
Sbjct: 350 DILYVNGESMIDLPFIERRRILEQNIMPVDEKCKPATALITDKVEEAQELFDESIKRGNE 409
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
GL+ K D ATY P R +K+K+ + D+LDL ++A G G++ G +F +
Sbjct: 410 GLMAK--DLQATYTPGVRGRKMVKIKE-----VLDTLDLAIVSAEWGHGRKAGWLTSFEV 462
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
A YD N+ + + K+ +GFS+ L+E + L+ +I R R D + PDV E
Sbjct: 463 AAYDEENDRYLVLGKVASGFSDEQLQEMTERLKP-LIHAERG--RVVD-VKPDVIVE 515
>gi|408381312|ref|ZP_11178862.1| DNA ligase [Methanobacterium formicicum DSM 3637]
gi|407816577|gb|EKF87139.1| DNA ligase [Methanobacterium formicicum DSM 3637]
Length = 557
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 154/548 (28%), Positives = 265/548 (48%), Gaps = 42/548 (7%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
V+ + + T R+ TDI+ N L V + PE L V +A +I P ELGIG +
Sbjct: 9 VYHDLDSTTKRLEKTDILANFLAKVGDEEPELLPTVTLMALGRIFPTWSEEELGIGSKLL 68
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRK-PDPLTITKVFDTFRLIAK 317
+KA+++A G + V+ + ++ GD+G+ A+ +S + PLTI KV +A+
Sbjct: 69 MKAISQAVGVSPEDVENRMRDTGDIGMAAEELYQKKSQVTLFSRPLTIGKVHRNLVKMAE 128
Query: 318 EAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH 377
+G +Q KK + + LL +A E +Y+ R + +LR+G+ E T+ A+ QA
Sbjct: 129 ISGNRAQFKKIDYLMELLSSAAPAEAKYITRTVLEELRVGVGEGTIRDAISQAF------ 182
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
NI + E A ++ ++ ++ +G L + PG P+ PMLA
Sbjct: 183 -----NIPKEVTERAHMLTNDMGLVAEVARM------EGEEGLRK-LTLKPGKPVKPMLA 230
Query: 438 KPTKGVSEIVNKFQDMEFT-CEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
+ + G+ V ++M + CE KYDG R QIH D ++I++R E + P++
Sbjct: 231 QLSPGIRVSV---EEMGWAICETKYDGIRVQIHRHGD-KIDIFTRRLENISLALPEISDY 286
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDI 554
+ K F+++ EI+A K + FQ + R R+ + + K+ + +Y FD+
Sbjct: 287 IE--KSLPHEDFIVEGEIIA--SRDGKPISFQYMLQRVRRKYEIDKMVSKIPLTVYLFDV 342
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFA--TTLTSIDLDEIQKFLDAAVDASCE 612
LY G P+L E L+ RR+ L + E G + + +T ++ + Q + ++ E
Sbjct: 343 LYYGG-PILDEPLQERRKILESIVKVESGKLELSAQVKVTPEEIHKAQDLFERSIKGGHE 401
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
G++IK D A Y P R LKLK + ++LDLV + +G+GKR G++L+
Sbjct: 402 GIMIK--DPHAPYMPGIRGKKMLKLKAE-----PETLDLVVVGGTYGKGKRAHFIGSYLM 454
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF-EPT 731
A D NN + + + TG + L E S + +I K + ++ ++ F E
Sbjct: 455 AIQDENN-QLKPLAYAATGLDDNTLMELSKMVEPLIITKDGRQVKIEPSVILEIAFSEIV 513
Query: 732 ERPETSNS 739
E PE+
Sbjct: 514 ESPESETG 521
>gi|251771892|gb|EES52466.1| DNA ligase I, ATP-dependent Dnl1 [Leptospirillum ferrodiazotrophum]
Length = 612
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 149/552 (26%), Positives = 251/552 (45%), Gaps = 44/552 (7%)
Query: 200 FDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASII 259
+ + +GRI D+ + + E +P++ +Y+ ++ P G +G+ + ++
Sbjct: 10 LESLEKTSGRI---DLAKGLAILLSELSPDETAKALYMVQGQLMPPFAGEPMGMAGSLLL 66
Query: 260 KALAEACGRT-----ESHVKKQYQEMGDLGLVAKASRSSQSMM---RKPDPLTITKVFDT 311
+A+A A E +KK+ +GD GL+A +S++ ++P +++ V+D
Sbjct: 67 RAIARALESLNAPLPEVDLKKRLAAIGDPGLLA------ESLLPPGKRP-LVSLAAVYDR 119
Query: 312 FRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAA 371
I++ +G SQ+ K + LL +++ R + +LR+G+ + T+L AL Q
Sbjct: 120 LLGISRLSGTGSQDDKILHLSRLLADIAPLSARFVCRFVMGRLRLGVGDATILDALVQTT 179
Query: 372 VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIP 431
V ++ + + E + + S L ++ DG+ ++ G P
Sbjct: 180 VSSKGEESAMKAERKRVREELEGAYNLCSDLGRVGAVLREEGLDGIRKIAPMV----GYP 235
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFP 491
+ L + EI+ K E KYDG R QIH G+ ++SRN E T FP
Sbjct: 236 VRMALCERLGSGEEIIEKIG--RAAVESKYDGFRCQIHCGPTGT-RLFSRNLEETTSMFP 292
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIY 550
++ A S L + RS + + E + YD E PFQ TR RK N+ ++ +
Sbjct: 293 EIARAASELF--AGRSAIFEGEALGYDGENDSYHPFQVTITRKRKHNILEKSSEIPLKCL 350
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSF---------EEEP--GFFQFATTLTSIDLDEI 599
FDILY +G L+ + RR+ L F E P G F + + + D E+
Sbjct: 351 VFDILYLDGVSLMDRPFQERRKILEGLFPVRVRGIADRELPPEGVFGASRLIVTEDPHEV 410
Query: 600 QKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
F D V+ EG+I K +D Y R+ NW+KLK+ Y ++ D++DL I + G
Sbjct: 411 DLFFDEVVEEGFEGVIAKRLD--GVYAAGSRNFNWIKLKRSYKSALSDTVDLALIGYYRG 468
Query: 660 RGKRTGV-YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRF 718
+G RT + GA L A YD+ EFQS+ +IG+G +E + L P P
Sbjct: 469 KGLRTKLGIGAVLGAVYDAGRGEFQSVARIGSGLTEEGWRDLRGLLEELRTDGPPPG--V 526
Query: 719 ADTISPDVWFEP 730
+ PD W P
Sbjct: 527 VSGLVPDFWVRP 538
>gi|361128949|gb|EHL00874.1| putative DNA ligase 3 [Glarea lozoyensis 74030]
Length = 409
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 185/367 (50%), Gaps = 72/367 (19%)
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
ML T+ +SE++ K Q +F S+ I+SR+ E T K+PD+V
Sbjct: 1 MLGSITRDLSEMLTKLQGRDF-------------------SLSIFSRHLELMTDKYPDLV 41
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDI 554
+ +++ V SF+++ E+VA D+E ++ FQ LS RARK+V++ +KV VC+++FD+
Sbjct: 42 DLIPKIRGDGVSSFIMEGEVVAVDQESGELKTFQALSNRARKDVAIGSVKVSVCLFSFDL 101
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCE 612
+Y NG+ LL R RRE L F E P F + ++ TS D + + +F +A D CE
Sbjct: 102 MYLNGESLLSRPFRERRELLRSLFTEVPNRFTWVKSIDATSQDSETVLEFFKSATDIKCE 161
Query: 613 GLIIKTMDR----------------------------------------------DATYE 626
G+++K +D ATYE
Sbjct: 162 GIMVKILDNLPNPNLIADVEDTEAADAIEKSARSKTIKKNAPENVPEKKTRRKALLATYE 221
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
P KR +WLK+KKDY + D+LDL+P+AA+HG+G+++ + LLA + ++ +++C
Sbjct: 222 PDKRLDSWLKVKKDYSTTF-DTLDLIPVAAWHGQGRKSQWWSPILLAVRNEDSGSLEAVC 280
Query: 687 KIGTGFSEAMLEERSSSLR--SKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI- 743
K +GF++ + ++ +P Y + +PDVWFEP E E + + ++
Sbjct: 281 KCISGFTDTFYKANREFYNPGNENTLGSKPGYVEYEGGNPDVWFEPKEVWEMAFADITLS 340
Query: 744 -VYDSQI 749
VY + I
Sbjct: 341 PVYTAAI 347
>gi|294495245|ref|YP_003541738.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalophilus mahii DSM 5219]
gi|292666244|gb|ADE36093.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalophilus mahii DSM 5219]
Length = 561
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 150/536 (27%), Positives = 251/536 (46%), Gaps = 45/536 (8%)
Query: 208 GRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG 267
G + +TD++ +L+ E T E+L V + + PA ++G+G+ + AL+++ G
Sbjct: 19 GSLEMTDVIAKLLK---EVTIEELPIVTHFVMGSVFPAWSDRQMGVGNRLLYTALSKSSG 75
Query: 268 RTESHVKKQYQEMGDLGLVAKASRSSQ--------SMMRKPDPLTITKVFDTFRLIAKEA 319
+E ++ ++ GD+G A + SS + + + + I +V++ F IA A
Sbjct: 76 VSEEEIENIIRKTGDIGETAVQALSSNPAGQSTFSAFIEEKPGMEIKEVYERFTHIADTA 135
Query: 320 GKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK 379
GK S K ++ L +AT E +YL RL +LRIG+ E + A+ +A
Sbjct: 136 GKRSHGTKIKNLQYLFNSATPIEARYLARLAIEQLRIGVGEGIVRDAISKA--------- 186
Query: 380 PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKP 439
E +V++ +L +V +G P+ MLA+
Sbjct: 187 --------FETDVDVVERAL-MLTNDLGLVAVAACNGGNEEVQKLDIQLNRPVKMMLAQV 237
Query: 440 TKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSR 499
T + +N E E+K+DG R QIH E ++ I+SR E T PDVV V
Sbjct: 238 TSSIQSALNDLG--EVAVEWKFDGARVQIHK-EGENIHIFSRRLENVTSSLPDVVKEVQ- 293
Query: 500 LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDILYR 557
+ + + +L+ E VA ++ K FQ + R R+ + I + + + FD+LY
Sbjct: 294 -ENVNADTAILEGEAVAIGKDG-KPRAFQDILKRFRRKYDVEAIAKAIPLKLNLFDVLYL 351
Query: 558 NGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIK 617
NG+ L+ LR RRE L+ + + +T + +EIQ+ A+ A EG++IK
Sbjct: 352 NGESLIDNPLRKRRELLFQNVQSSDRILVDRQVITD-NEEEIQEIYADALRAGHEGIMIK 410
Query: 618 TMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDS 677
DA Y P KR NWLK KK +E+ LDLV I A G G+R + G++ L CYD
Sbjct: 411 K--PDAPYSPGKRGKNWLK-KKPLMET----LDLVVIGAEWGYGRRANLIGSYALGCYDP 463
Query: 678 NNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTER 733
+ +F +I K+ TG ++ L E ++ V+ + I ++ FE ++
Sbjct: 464 DTGKFPAIGKVATGITDEKLAELTTLFSDLVVYEAGRKIELKPEIVFEIAFEEIQK 519
>gi|448456227|ref|ZP_21595040.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum lipolyticum DSM 21995]
gi|445812726|gb|EMA62716.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum lipolyticum DSM 21995]
Length = 678
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 158/562 (28%), Positives = 265/562 (47%), Gaps = 51/562 (9%)
Query: 176 EFDPKMVACWEKGE--RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVM-ETTPEDLV 232
E DP A E+ R+ F + + ++ E I T +V ++L +DL
Sbjct: 74 ETDPYRGAFAERSRTPRMEFAAFAERAERLAAEPADIETTRLVADLLAAAGGRGKSDDLA 133
Query: 233 PVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHVKKQYQEMGDLGLVA--- 287
V ++ PAH+ L +G A +A+A A G + V+++ E G++G VA
Sbjct: 134 TVTRFLLGRVFPAHDTRTLDVGPALCREAIARAAGPNVGAADVEERLAEAGEIGAVAAGF 193
Query: 288 --KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQY 345
R + D LT+ V R +A +AG S+ +K++ + L E +
Sbjct: 194 DFGGQRGLAAFGEGRDRLTVAAVDAALRELAADAGDGSESRKRDALFGLFNRCEPAEAKL 253
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYN-------EQHSKPPPNIQSPLEEAAKIVKQV 398
L RL+ ++R+G+ E T+ A+ +A + E + P +++ +EAA V++
Sbjct: 254 LARLVLGEMRLGVGEGTVRDAIAEAFLAEASADDGKEGNDGDDPTLRA-RDEAAAAVERA 312
Query: 399 FSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
V Y ++ +G+ L G P+ MLA+ ++ V F E E
Sbjct: 313 LQVTNDYGRVAVLARDEGLAGL-RAEGLAVGRPVQAMLAQAGT-ATDAVEAFG--EVAVE 368
Query: 459 YKYDGERAQIHYLEDGSVE--------IYSRNAERNTGKFPDVVLAV-SRLKKPSVRSFV 509
K+DG R Q+HY+ + + E +YSRN + T P+VV V +R+ P +
Sbjct: 369 TKFDGARVQVHYVPESAAEGGEGLGPRVYSRNMDDVTDALPEVVEYVEARVSVP----VI 424
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVC--IYAFDILYRNGQPLLQEQL 567
LD E+VA D + LPFQ + R R+ + ++ +V ++AFD L+ +G+ LL E L
Sbjct: 425 LDGEVVAVDDDGDP-LPFQEVLRRFRRKHDVDRMREEVGLRLHAFDCLHADGEDLLDEPL 483
Query: 568 RVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEP 627
R R + L D + +FA D + I+ AA+DA EG+++K DA Y P
Sbjct: 484 RARHDLLVDVLPDAAASVEFAD-----DPEAIEVAEAAALDAGHEGVMLKNP--DAAYTP 536
Query: 628 SKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK 687
R +WLK K D ++LD V + A G G+R ++G FLL + ++EF +I K
Sbjct: 537 GDRGRDWLKRKPDV-----ETLDAVVVGAEWGEGRRAELFGTFLLGVG-AGDDEFATIGK 590
Query: 688 IGTGFSEAMLEERSSSLRSKVI 709
+ TG ++ L + + L+ V+
Sbjct: 591 VATGLTDEALADLTERLKPHVV 612
>gi|339261064|ref|XP_003368093.1| DNA ligase 1 [Trichinella spiralis]
gi|316961016|gb|EFV48151.1| DNA ligase 1 [Trichinella spiralis]
Length = 237
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 128/210 (60%), Gaps = 8/210 (3%)
Query: 290 SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRL 349
SR+ Q + PLT+ +F IA +G S KK +K LLV+ DCE +YLIR
Sbjct: 2 SRNMQRTIFATRPLTVAGIFAKLNQIAHLSGSSSMNKKLEMVKGLLVSCRDCEARYLIRC 61
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP-----LEEAAKIVKQVFSVLPV 404
L K+RIGLAEQ+LL AL A + E+ + ++ L+E A I+K + P
Sbjct: 62 LSGKMRIGLAEQSLLVALAHAFAFIERKKENKKKLRDDALKEYLDECALIMKT--AECPD 119
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y KIV L G+ L C TPGIP+ PMLA P+KG+ E++ +F EF CE+KYDGE
Sbjct: 120 YGKIVDIALRHGLHALPEHCHITPGIPLKPMLAFPSKGIEEVLKRFGSAEFACEWKYDGE 179
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
RAQIH+ DG+V+++SRN E +TGK+PD+V
Sbjct: 180 RAQIHFY-DGTVKVFSRNQENHTGKYPDIV 208
>gi|281307037|pdb|3GDE|A Chain A, The Closed Conformation Of Atp-Dependent Dna Ligase From
Archaeoglobus Fulgidus
Length = 558
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 232/469 (49%), Gaps = 40/469 (8%)
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA 289
DL VV K+ P + ELG+G + +AL G S ++ +E GDLGLVA+
Sbjct: 41 DLYDVVLFITGKVYPPWDERELGVGIGLLYEALENVSGVKRSEIESMIREYGDLGLVAEQ 100
Query: 290 SRSSQSMMRKP-DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIR 348
+ M + LT+ KV +TF IA G+ S ++K + L AT E +YL R
Sbjct: 101 LIKKKKMTTLAFEELTVRKVRETFDEIASLTGEGSMKRKIMLLTGLYGLATPLEARYLTR 160
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ +++R+G+ E + A+ +A + + + I + L A + K+
Sbjct: 161 LILNEMRLGVGEGIMRDAIARAFRADPETVERAYMITNDLGRVAVVAKK----------- 209
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+G L IP+ MLA+ + + V + + E+K+DG R Q+
Sbjct: 210 ------EGEEGLRK-MKIEIHIPVRMMLAQVAESLESAVREMRTA--AVEWKFDGSRVQV 260
Query: 469 HYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
H+ DGS V IYSR E T PD+V + + KP V +LD E++A ++ K +PF
Sbjct: 261 HW--DGSRVTIYSRRLENVTNALPDIVEEIKKSVKPGV---ILDGEVIAV--KEGKPMPF 313
Query: 528 QTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFF 585
Q + R R+ ++ + K+ + + FDILY +G+ + LR RR+ L +S E
Sbjct: 314 QHVLRRFRRKHDVAKMVEKIPLEAHFFDILYHDGE-CIDLPLRERRK-LLESAVNESEKI 371
Query: 586 QFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESI 645
+ A + + +DE++K D A+ A EG++IK + Y P KR NWLK+K +I
Sbjct: 372 KLAKQIVTDSVDEVRKMYDEAISAGHEGVMIKL--PSSPYIPGKRGKNWLKVK-----AI 424
Query: 646 GDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
++LDLV + G GKR+ +F LAC D + + ++ TGF+E
Sbjct: 425 METLDLVVVGGEWGEGKRSHWLSSFELACLDPVTGKLLKVGRVATGFTE 473
>gi|14424444|sp|O29632.2|DNLI_ARCFU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
Length = 555
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 232/469 (49%), Gaps = 40/469 (8%)
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA 289
DL VV K+ P + ELG+G + +AL G S ++ +E GDLGLVA+
Sbjct: 38 DLYDVVLFITGKVYPPWDERELGVGIGLLYEALENVSGVKRSEIESMIREYGDLGLVAEQ 97
Query: 290 SRSSQSMMRKP-DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIR 348
+ M + LT+ KV +TF IA G+ S ++K + L AT E +YL R
Sbjct: 98 LIKKKKMTTLAFEELTVRKVRETFDEIASLTGEGSMKRKIMLLTGLYGLATPLEARYLTR 157
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ +++R+G+ E + A+ +A + + + I + L A + K+
Sbjct: 158 LILNEMRLGVGEGIMRDAIARAFRADPETVERAYMITNDLGRVAVVAKK----------- 206
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+G L IP+ MLA+ + + V + + E+K+DG R Q+
Sbjct: 207 ------EGEEGLRK-MKIEIHIPVRMMLAQVAESLESAVREMRTA--AVEWKFDGSRVQV 257
Query: 469 HYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
H+ DGS V IYSR E T PD+V + + KP V +LD E++A ++ K +PF
Sbjct: 258 HW--DGSRVTIYSRRLENVTNALPDIVEEIKKSVKPGV---ILDGEVIAV--KEGKPMPF 310
Query: 528 QTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFF 585
Q + R R+ ++ + K+ + + FDILY +G+ + LR RR+ L +S E
Sbjct: 311 QHVLRRFRRKHDVAKMVEKIPLEAHFFDILYHDGE-CIDLPLRERRK-LLESAVNESEKI 368
Query: 586 QFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESI 645
+ A + + +DE++K D A+ A EG++IK + Y P KR NWLK+K +I
Sbjct: 369 KLAKQIVTDSVDEVRKMYDEAISAGHEGVMIKL--PSSPYIPGKRGKNWLKVK-----AI 421
Query: 646 GDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
++LDLV + G GKR+ +F LAC D + + ++ TGF+E
Sbjct: 422 METLDLVVVGGEWGEGKRSHWLSSFELACLDPVTGKLLKVGRVATGFTE 470
>gi|11498231|ref|NP_069457.1| DNA ligase [Archaeoglobus fulgidus DSM 4304]
gi|2649996|gb|AAB90616.1| DNA ligase (lig) [Archaeoglobus fulgidus DSM 4304]
Length = 556
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 232/469 (49%), Gaps = 40/469 (8%)
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA 289
DL VV K+ P + ELG+G + +AL G S ++ +E GDLGLVA+
Sbjct: 39 DLYDVVLFITGKVYPPWDERELGVGIGLLYEALENVSGVKRSEIESMIREYGDLGLVAEQ 98
Query: 290 SRSSQSMMRKP-DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIR 348
+ M + LT+ KV +TF IA G+ S ++K + L AT E +YL R
Sbjct: 99 LIKKKKMTTLAFEELTVRKVRETFDEIASLTGEGSMKRKIMLLTGLYGLATPLEARYLTR 158
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ +++R+G+ E + A+ +A + + + I + L A + K+
Sbjct: 159 LILNEMRLGVGEGIMRDAIARAFRADPETVERAYMITNDLGRVAVVAKK----------- 207
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+G L IP+ MLA+ + + V + + E+K+DG R Q+
Sbjct: 208 ------EGEEGLRK-MKIEIHIPVRMMLAQVAESLESAVREMRTA--AVEWKFDGSRVQV 258
Query: 469 HYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
H+ DGS V IYSR E T PD+V + + KP V +LD E++A ++ K +PF
Sbjct: 259 HW--DGSRVTIYSRRLENVTNALPDIVEEIKKSVKPGV---ILDGEVIAV--KEGKPMPF 311
Query: 528 QTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFF 585
Q + R R+ ++ + K+ + + FDILY +G+ + LR RR+ L +S E
Sbjct: 312 QHVLRRFRRKHDVAKMVEKIPLEAHFFDILYHDGE-CIDLPLRERRK-LLESAVNESEKI 369
Query: 586 QFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESI 645
+ A + + +DE++K D A+ A EG++IK + Y P KR NWLK+K +I
Sbjct: 370 KLAKQIVTDSVDEVRKMYDEAISAGHEGVMIKL--PSSPYIPGKRGKNWLKVK-----AI 422
Query: 646 GDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
++LDLV + G GKR+ +F LAC D + + ++ TGF+E
Sbjct: 423 METLDLVVVGGEWGEGKRSHWLSSFELACLDPVTGKLLKVGRVATGFTE 471
>gi|406960159|gb|EKD87314.1| hypothetical protein ACD_36C00150G0002 [uncultured bacterium]
Length = 515
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 237/495 (47%), Gaps = 39/495 (7%)
Query: 242 IAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMR-KP 300
+AP +E +E GI D I++A+A+A + V K +++ GD+G A +S+ R
Sbjct: 1 MAPLYEAIEFGIADKFIVRAIAQAYNNSIDSVTKAFKKAGDVGTAA------ESLYRGHD 54
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
D L+I KV+D I + +G S+EKK + LL + +YL R+ KLR+G ++
Sbjct: 55 DHLSIEKVYDLLFTITQTSGIGSREKKIRLLAELLSSVGRLSSRYLTRIPLDKLRLGFSD 114
Query: 361 QTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL 420
T+L AL N+ + + LEEA ++V P + + G+ L
Sbjct: 115 MTILDALSWMLNGNK-------SARVKLEEA-------YNVRPDIGYLAKTIKEHGMKGL 160
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
S+ G PI L + E++ K E KYDG R QIHY + + + +S
Sbjct: 161 SH-VGVKVGAPILACLCQRLPNADEMIKKMG--RVAVEPKYDGVRVQIHYQQ--TTKTFS 215
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVS 539
RN E T FP++ +L + R +LD E + D + K++ FQ +TR RK +++
Sbjct: 216 RNLENTTDMFPELQNIGKQL---NAREVILDSEAIGLDPKTGKLISFQETTTRKRKHDIA 272
Query: 540 LSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEI 599
+ +KV + + FDILY+NG+ LL RR L ++ +T +
Sbjct: 273 ETLLKVPLKFFVFDILYKNGESLLSVPFSKRRRILEETIRAGNSLVVSEQIITD-SAAAL 331
Query: 600 QKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES--IGDSLDLVPIAAF 657
+ + D + EG ++K D+ YEP +R W+K K++ ++ + D++D V +
Sbjct: 332 RVYHDKQLKKGLEGAVVKKW--DSPYEPGRRGYTWVKFKEEEGKTGKLTDTIDAVVMGYT 389
Query: 658 HGRGKRTGV-YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRS-KVIPKPRPY 715
G GKRT G LL ++F ++ K+G+G +E L SL+ ++ +P+ Y
Sbjct: 390 SGEGKRTAFGIGQVLLGV--RRGDDFVTVTKLGSGATEKELGGLFQSLKKLRMKEQPKEY 447
Query: 716 YRFADTISPDVWFEP 730
PDVW P
Sbjct: 448 KDVDKVYYPDVWVSP 462
>gi|25989678|gb|AAN74875.1| putative DNA ligase [Entamoeba histolytica]
Length = 295
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 136/217 (62%), Gaps = 2/217 (0%)
Query: 527 FQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
FQ L RA+K VS+ I ++VC+ FDI+Y NG+ L+ + L+ RR+ L+ +F E F
Sbjct: 2 FQILGRRAKKGVSVHSIAINVCVNVFDIVYLNGKDLMDKPLKERRDILHSTFHEVSQRFL 61
Query: 587 FATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIG 646
FA + ++I F + A++ EGL+ KT+ DA Y P KR+ W KLKKDY+ +
Sbjct: 62 FARFKNIENEEDILPFFEEAINHRTEGLMCKTLIYDAEYIPDKRTDTWYKLKKDYLNGLA 121
Query: 647 DSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRS 706
D++DLVP+ A+ G GKR GVYGAFLLAC D ++ +F+++ K+GTGFS+ L++ L++
Sbjct: 122 DTVDLVPVGAWMGEGKRAGVYGAFLLACRDEDSGDFETVTKVGTGFSDEALQKLYEHLKT 181
Query: 707 KVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
+ K + + D + PDVWFEP + E + S+
Sbjct: 182 -LECKEKKNVKHGDNL-PDVWFEPKDVWEIKGADLSL 216
>gi|375083079|ref|ZP_09730114.1| ATP-dependent DNA ligase [Thermococcus litoralis DSM 5473]
gi|374742236|gb|EHR78639.1| ATP-dependent DNA ligase [Thermococcus litoralis DSM 5473]
Length = 560
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 149/497 (29%), Positives = 247/497 (49%), Gaps = 44/497 (8%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKK 275
V + L+ V + PE L V YL K+ P + ELG+G+ +I+A++ A G ++
Sbjct: 26 VADFLKKVED--PELLEIVPYLILGKVFPDWDERELGVGEKLLIRAVSMATGINSDEIEN 83
Query: 276 QYQEMGDLG---LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
++ GDLG +A R +S +P LTI +V+ T +A+ G+ SQ++K +
Sbjct: 84 SVKDTGDLGESVALALQRRKQKSFFSQP--LTIKRVYSTLVKVAETTGEGSQDRKLKYLA 141
Query: 333 ALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAA 392
L + A+ E +YL R + +R G+AE L A+ +A ++ L E A
Sbjct: 142 NLFMDASPEEGKYLARTILGTMRTGVAEGLLRDAIAEAF-----------RVKVELVERA 190
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSE-IVNKFQ 451
++ F + K+ +G+ G PI PMLA+ V E ++
Sbjct: 191 YMLTSDFGFVA---KVAKLEGDEGLLK----VKIQVGKPIKPMLAQMVANVREALIEMGG 243
Query: 452 DMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
+ EF E KYDG R Q+H +DG V +YSR E T P+VV + KP ++
Sbjct: 244 EAEF--EIKYDGARVQVH--KDGEKVIVYSRRLENVTRSIPEVVERIKESLKPE--KVIV 297
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLR 568
+ E+VA E+ + PFQ + R R+ ++ ++ K+ + + FD+LY +G+ ++ Q
Sbjct: 298 EGELVAVG-EEGRPRPFQYVLRRFRRKYNIDEMIEKIPLELNLFDVLYVDGKSMIDVQFI 356
Query: 569 VRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPS 628
RR+ L + + + A L + + +E ++F A+D EGL+ K +D + YE
Sbjct: 357 ERRKTL-EGIVTTNEWIKIAENLITKNPEEAEEFYHRALDLGHEGLMAKRLD--SVYELG 413
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
R WLK+K ++LDLV I A G G+R+GV +FLL YD +F + K+
Sbjct: 414 NRGKKWLKIKPTM-----ENLDLVIIGAEWGEGRRSGVLSSFLLGAYDPIRGDFVPVGKV 468
Query: 689 GTGFSEAMLEERSSSLR 705
G+GF++ L E + L+
Sbjct: 469 GSGFTDEDLIEFTKMLK 485
>gi|84489085|ref|YP_447317.1| ATP-dependent DNA ligase [Methanosphaera stadtmanae DSM 3091]
gi|121725517|sp|Q2NHF9.1|DNLI_METST RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|84372404|gb|ABC56674.1| ATP-dependent DNA ligase [Methanosphaera stadtmanae DSM 3091]
Length = 557
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 249/518 (48%), Gaps = 40/518 (7%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
V++ IS+ + R+ DI+ + L + ET + + L KI P E+GI I
Sbjct: 12 VYEKISSTSSRLEKQDIIADFLMYIKETDADITYDITLLLQGKIFPPWSDKEMGISTQLI 71
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVAKA-SRSSQSMMRKPDPLTITKVFDTFRLIAK 317
IKAL+ G + ++ + E+GD+G +++ ++++ + PLT+ KV R
Sbjct: 72 IKALSNLLGESTKSIENKLAEVGDMGEISEELIKNNKQVTFFKVPLTVKKVLSNLRKTES 131
Query: 318 EAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH 377
G SQ KK N + L +A+ E +Y+ R + +LRIG+ E TL+ A+ QA +++
Sbjct: 132 ITGSKSQNKKINYLLELYTSASPLEAKYITRTITERLRIGVGEGTLVEAIAQAYNIDKEI 191
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
+ + L E A ++ + + + TPG PI PMLA
Sbjct: 192 IDRAYMLSNDLGEVASRAQESIESV-------------------KSLTITPGKPIKPMLA 232
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ + G+ E + + + + CE KYDG R QIH+ + +I++R E T P+VV +
Sbjct: 233 QLSPGIKESITEMKKV--ICETKYDGIRVQIHHY-NNKTKIFTRRLENVTNALPEVVEYI 289
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDIL 555
PS + F+++ E++A + K + FQ + R ++ + + K+ + ++ FD+L
Sbjct: 290 EE-ALPS-KDFIVEGEVIA--TKDNKPISFQYILQRVKRKYDIDKMREKIPLKVFLFDVL 345
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT--TLTSIDLDEIQKFLDAAVDASCEG 613
Y + +P + + ++R L + + +T ++ + E +K ++D EG
Sbjct: 346 YYD-KPTAELPI-IQRRQLLEEIVTTSKNVELSTMKIVSQENYTEAEKLFTWSIDEGHEG 403
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
++ K D + Y P KR N LK K + ++LD V +G+GKR +G++LL+
Sbjct: 404 IMFK--DVTSPYSPGKRGKNMLKYK-----PLRETLDCVITGGTYGKGKRAKFFGSYLLS 456
Query: 674 CYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
D E++++ TG + +L + + +I K
Sbjct: 457 LLDEKTGEYKTLVHAATGMDDDLLASLTKRMEKLIISK 494
>gi|73669404|ref|YP_305419.1| DNA ligase (ATP) [Methanosarcina barkeri str. Fusaro]
gi|121731261|sp|Q46BA3.1|DNLI2_METBF RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|72396566|gb|AAZ70839.1| DNA ligase (ATP) [Methanosarcina barkeri str. Fusaro]
Length = 568
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 151/506 (29%), Positives = 248/506 (49%), Gaps = 49/506 (9%)
Query: 213 TDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESH 272
T V ++L+ V E+L + +++ PA G +LGIG + + +L++A G
Sbjct: 24 TSRVADLLKKV---DVEELPIATHFIMSEVFPAWSGEQLGIGTSLLYVSLSKASGMPVKS 80
Query: 273 VKKQYQEMGDLG----LVAKASRSSQ----SMMRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
++ + GD+G L+ K R +Q S + L+IT+V++ F++ ++ +GK SQ
Sbjct: 81 IESLIRTTGDIGDTALLILKEKRKNQVTFSSFFEEQPELSITEVYNRFKIASEASGKGSQ 140
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI 384
+ K ++ L ++T E +Y+ RL +LRIG+ E + A+ +A S P
Sbjct: 141 DIKIKNLQFLFTSSTPREAKYISRLALEELRIGVGEGVVRDAIAKA------FSVP---- 190
Query: 385 QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVS 444
+V+ F V IV A DG + PI ML++ +
Sbjct: 191 -------VDVVEHAFMVTNDL-GIVAATAKDGGVEALESLGIEINRPIKMMLSQIS---P 239
Query: 445 EIVNKFQDM-EFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKP 503
+IV ++M E E+K+DG R Q+H D SV ++SR E T PD+V + K
Sbjct: 240 DIVADIKEMKEAAIEWKFDGARVQVHKAGD-SVMLFSRKLENVTNSLPDLVEIIR--KHV 296
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD--IKVDVCIYAFDILYRNGQP 561
S +LD E VA D E + FQ + R R+ + + + + + + FDI+Y NG+
Sbjct: 297 KAESAILDGEAVAVD-ENGRPRAFQEILKRFRRKYDVEEKALGIPIQLNLFDIMYLNGKT 355
Query: 562 LLQEQLRVRREHLYDSFE---EEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKT 618
L+ L RR+ L E E+ + + DLD I+K A+DA EG+++K
Sbjct: 356 LIDLPLIERRKALESCVESSVEDSKSISVDKQVITGDLDLIEKIYKEALDAGHEGVMVK- 414
Query: 619 MDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSN 678
+ ++ Y P KR NWLK KK +E +LDLV + A G G+R + G++ +ACYD
Sbjct: 415 -NPNSFYSPGKRGKNWLK-KKPLME----TLDLVVVGAEWGFGRRANLLGSYTVACYDPK 468
Query: 679 NEEFQSICKIGTGFSEAMLEERSSSL 704
F + K+GTG ++ L+E + L
Sbjct: 469 TLRFLQVGKVGTGLTDDQLKELTEIL 494
>gi|406700856|gb|EKD04018.1| DNA ligase [Trichosporon asahii var. asahii CBS 8904]
Length = 813
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 158/553 (28%), Positives = 239/553 (43%), Gaps = 85/553 (15%)
Query: 264 EACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDS 323
E G +K+ Y + GD G VA ++++ + +P PL V+ +A G S
Sbjct: 254 EVSGLQARDLKRLYIKSGDPGDVAFEAKTNVRTLVQPTPLIAYDVYARLLRLADIKGVQS 313
Query: 324 QEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPN 383
++K + I+ LLV A E +YLI ++ L LA L + Q
Sbjct: 314 GKQKTDIIRRLLVQARGEEVRYLIGAVRLTLLTALARAAALHEAPSELLSRVQPQPEKKK 373
Query: 384 IQSPLEE--------AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPM 435
+ P E AA +V++ + P Y + +L G+ L + GIPI PM
Sbjct: 374 VVDPAREEVEALCADAAALVRRTYVRHPNYGDLSAGVL-QGLEGLEERVPLSVGIPISPM 432
Query: 436 LAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI------HYLEDGSVEIYSRNAERNTGK 489
L T+ + E+ ++ + FT E + + R+ E +E E T
Sbjct: 433 LGSITRSLDEVYDRLGTLPFTAEGRSEAGRSAPANARPRRRAEGAGLEGRQVGREGWTEG 492
Query: 490 FPDVVL---------------------------AVSRLKKPSVRSFVLDCEIVAYDREKQ 522
+PD+ L A+ L+ P V S ++D EIVA D+
Sbjct: 493 YPDICLTALELTKDLTHKRKPFPDDGFSEPSAAAMELLETPRVTSLIIDAEIVAIDKVTG 552
Query: 523 KILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF---- 578
+ FQ L+ RA+K+V + DIKV V I AFD++ N PLL L RR L
Sbjct: 553 EKRTFQELTNRAKKDVRVEDIKVVVDICAFDLMLINDVPLLSVPLIHRRHLLRQLLRPVR 612
Query: 579 EEEPGFFQFA--TTLTSIDLDE---IQKFLDAAVDASCEGLIIKTMDRD----------- 622
E+P F +F+ + S DL + ++ F D V+ EGL++K +D
Sbjct: 613 SEDPHFARFSHIENIDSNDLPDQAALRSFFDKVVEQKAEGLMVKLLDTGITETTEVIEVE 672
Query: 623 -------------------ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
ATYEP +RS WLK+KKDY+E +GDSLDLVPI A+ G G++
Sbjct: 673 EPADGVKVEEKISRRKALPATYEPDQRSAGWLKVKKDYLEGLGDSLDLVPIGAWWGNGRK 732
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM---LEERSSSLRSKVIPKPRPY-YRFA 719
G + LLA + + +++CK +GF++A L R S P Y
Sbjct: 733 AGWWSPILLAARNPESGALEAVCKCMSGFTDAFYKNLIARYPPEGSDATSTDAPLGYVET 792
Query: 720 DTISPDVWFEPTE 732
+ P +WFEP E
Sbjct: 793 GGLVPSIWFEPKE 805
>gi|289191596|ref|YP_003457537.1| DNA ligase I, ATP-dependent Dnl1 [Methanocaldococcus sp. FS406-22]
gi|288938046|gb|ADC68801.1| DNA ligase I, ATP-dependent Dnl1 [Methanocaldococcus sp. FS406-22]
Length = 573
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 253/527 (48%), Gaps = 68/527 (12%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMET-TPEDLVPVVYLAANKIAPAHEGLELGIGDAS 257
+F+ I T R+ D ++ V E PEDL + Y+A ++ P ++ ELGIG+
Sbjct: 9 IFNKIEKTTKRLEKRDYFIKLIDMVKEKGKPEDLKKICYMAIGRVYPEYDERELGIGEKL 68
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLGLVAKASRS---SQSMMRKPDPLTITKVFDTFRL 314
+I A+ + G + + ++ +E GD+GL + +S S+ +P LT+ +V++T +
Sbjct: 69 LINAVT-SIGINKDELLEKIKETGDIGLAIEQLKSKIKQASLFFQP--LTVDEVYETLKR 125
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+ + G+ SQ+KK I +L + A+ E +YL RL+ +RIG+ T+L +L +VY
Sbjct: 126 VGEIEGEGSQKKKLRLISSLFLRASPIECRYLARLILEDMRIGMNVPTILDSL---SVY- 181
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
P E+ KI + + EK++ L S PI P
Sbjct: 182 ---------FNVPKEKLEKIYAITNDIGLLAEKLLMGDLE------SEDLKLKLFRPIKP 226
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDV 493
MLA+ T + E + + +F E KYDG R QIH +DG+ V+IYSR E T P++
Sbjct: 227 MLAQLTPSIEEALLEMGRAQF--ETKYDGARVQIH--KDGNKVKIYSRRLEDVTNALPEI 282
Query: 494 VLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYA 551
V AV K +V +++ E VA D++ K PFQ + R R+ + + ++++ +Y
Sbjct: 283 VEAV---KNINVDKLIVEGECVAIDKQTGKPRPFQDILRRFRRKYDIGKMMKEINLRVYL 339
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF--------------------FQFATTL 591
FDILY++G + E+ RR+ L EE G+ + L
Sbjct: 340 FDILYKDGVSFIDEEFEKRRKVL----EEIVGYENDWRTERERIEKELKSDKIIDISYKL 395
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
+ D +E ++F + ++ EG++IK + A Y P R K K +SLD+
Sbjct: 396 VTNDANEAKEFYNWSLSIGHEGVMIKNL--KAPYTPGSRVRTMYKFKPTL-----ESLDV 448
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
V A G GKR YG+F + D + I +GTG +EA LE
Sbjct: 449 VITKAKRGMGKRKDWYGSFEICVRDEEGNLY-PIGHVGTGLTEADLE 494
>gi|15668343|ref|NP_247139.1| DNA ligase [Methanocaldococcus jannaschii DSM 2661]
gi|2494166|sp|Q57635.1|DNLI_METJA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|1590924|gb|AAB98156.1| DNA ligase (lig) [Methanocaldococcus jannaschii DSM 2661]
Length = 573
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 252/527 (47%), Gaps = 68/527 (12%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMET-TPEDLVPVVYLAANKIAPAHEGLELGIGDAS 257
+F+ I T R+ D ++ V E PEDL + Y+A ++ P ++ ELGIG+
Sbjct: 9 IFNKIEKTTKRLEKRDYFIKLIDMVKEKGKPEDLKKICYMAIGRVYPEYDERELGIGEKL 68
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLGLVAKASRS---SQSMMRKPDPLTITKVFDTFRL 314
+I A+ + G + + ++ +E GD+GL + +S S+ +P LT+ +V++T +
Sbjct: 69 LINAVT-SIGIKKDELLEKIKETGDIGLAIEQLKSKIKQASLFFQP--LTVDEVYETLKR 125
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+ + G+ SQ+KK I +L + A+ E +YL RL+ +RIG+ T+L AL +VY
Sbjct: 126 VGEIEGEGSQKKKLRLISSLFLRASPIECRYLARLILEDMRIGMNVPTILDAL---SVY- 181
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
P E+ KI + + EK++ L S PI P
Sbjct: 182 ---------FNVPKEKLEKIYAITNDIGLLAEKLLMGDLE------SEELKLKLFRPIKP 226
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDV 493
MLA+ T + E + + +F E KYDG R QIH +DG+ V+IYSR E T P++
Sbjct: 227 MLAQLTPSIEEALLEMGRAQF--ETKYDGARVQIH--KDGNKVKIYSRRLEDVTNALPEI 282
Query: 494 VLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYA 551
V AV K +V +++ E VA D++ K PFQ + R R+ + + ++++ +Y
Sbjct: 283 VEAV---KNINVDKLIVEGECVAIDKQTGKPRPFQDILRRFRRKYDIGKMMKEINLRVYL 339
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF--------------------FQFATTL 591
FDILY++G + E+ RR+ L EE G+ + L
Sbjct: 340 FDILYKDGVSFIDEEFEKRRKVL----EEIVGYENDWRTERKRIEKELKSDKIIDISYKL 395
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
+ D E ++F + ++ EG++IK + A Y P R K K +SLD+
Sbjct: 396 VTNDAKEAREFYNWSLSIGHEGVMIKNL--KAPYTPGSRVRTMYKFKPTL-----ESLDV 448
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
V A G GKR YG+F + D + I +GTG +EA LE
Sbjct: 449 VITKAKRGMGKRKDWYGSFEICVRDEEGNLY-PIGHVGTGLTEADLE 494
>gi|21228816|ref|NP_634738.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
gi|23813979|sp|Q8PTK1.1|DNLI2_METMA RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|20907336|gb|AAM32410.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
Length = 568
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 148/506 (29%), Positives = 248/506 (49%), Gaps = 49/506 (9%)
Query: 213 TDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESH 272
T+ V ++L+ V E+L + +++ PA G +LGIG + + +L++A G +
Sbjct: 24 TNKVADLLKKV---DVEELPVATHFIMSEVFPAWSGEQLGIGTSLLYVSLSKASGMSIHS 80
Query: 273 VKKQYQEMGDLG----LVAKASRSSQ----SMMRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
++ + GD+G L+ K R +Q S + L+IT+V+ F++ ++ +GK SQ
Sbjct: 81 IESLVRTTGDIGDTALLILKEKRKNQVTFSSFFEEKPELSITEVYRRFKIASEASGKGSQ 140
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI 384
+ K ++ L +++ E +Y+ RL +LRIG+ E + A+ +A S P
Sbjct: 141 DIKVKNLQFLFTSSSPREAKYISRLALEELRIGVGEGVVRDAIAKA------FSVP---- 190
Query: 385 QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVS 444
A+IV+ F V + A GV L PI ML++ + +
Sbjct: 191 -------AEIVEHSFMVTNDLGIVAAAAKKGGVEALER-LGIEINRPIKMMLSQISPDID 242
Query: 445 EIVNKFQDMEFTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKFPDVVLAVSRLKKP 503
+ + E E+K+DG R QIH +DG SV ++SR E T PD+V V K
Sbjct: 243 ADIRAMK--EVAIEWKFDGARVQIH--KDGNSVTLFSRKLENVTSSLPDLVEIVR--KHV 296
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD--IKVDVCIYAFDILYRNGQP 561
S +LD E VA D E FQ + R R+ + + + + + + FDI+Y NG+
Sbjct: 297 KAESAILDGEAVAVD-ENGVPRAFQEILKRFRRKYDVREKALGIPIQLNFFDIMYINGKT 355
Query: 562 LLQEQLRVRREHLYDSFE---EEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKT 618
L+ L RR+ L E E+ A + + DL+ ++K A+ A EG+++K
Sbjct: 356 LIDLPLLERRKALESCVESSVEDSKSISVAEQVITGDLELVEKIYREALKAGHEGVMVK- 414
Query: 619 MDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSN 678
+ ++ Y P KR NWLK K + D+LDLV + A G G+R + G++ +ACYD +
Sbjct: 415 -NPNSVYSPGKRGKNWLKKK-----PLMDTLDLVIVGAEWGFGRRANLIGSYTVACYDPD 468
Query: 679 NEEFQSICKIGTGFSEAMLEERSSSL 704
F + K+GTG ++ L+E + L
Sbjct: 469 TTRFLQVGKVGTGLTDDQLKELTEIL 494
>gi|256810695|ref|YP_003128064.1| ATP-dependent DNA ligase I [Methanocaldococcus fervens AG86]
gi|256793895|gb|ACV24564.1| DNA ligase I, ATP-dependent Dnl1 [Methanocaldococcus fervens AG86]
Length = 573
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 150/520 (28%), Positives = 244/520 (46%), Gaps = 54/520 (10%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMET-TPEDLVPVVYLAANKIAPAHEGLELGIGDAS 257
+F+ I T R+ D ++ E PEDL + Y+A ++ P ++ ELG+G+
Sbjct: 9 IFNKIEKTTKRLEKRDYFIKLIDMAKEKGKPEDLKKICYMAIGRVYPEYDERELGVGEKL 68
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS-QSMMRKPDPLTITKVFDTFRLIA 316
+I A+ + G + + ++ +E GD+GL + +S + PLT+ +V++T R +
Sbjct: 69 LINAVT-SIGINKDELLEKIKETGDIGLAIEQLKSKIKQAYLFFQPLTVDEVYETLRRVG 127
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
+ G+ SQ+KK I +L + A+ E +YL RL+ +RIG+ T+L L ++Y
Sbjct: 128 EIEGEGSQKKKLRLISSLFLRASPIECRYLARLILEDMRIGMNVPTILDTL---SLY--- 181
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
P E+ KI + + EK++ L S+ PI PML
Sbjct: 182 -------FNVPREKLEKIYAITNDIGLLAEKLLKGDLE------SDELRLKLFRPIKPML 228
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
A+ + E + + +F E KYDG R QIH E V IYSR E T P++V A
Sbjct: 229 AQLAPSIEEALLEMGRAQF--ETKYDGARVQIHK-EGNKVRIYSRRLEDVTNALPEIVEA 285
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDI 554
V KK V +++ E VA D+E K PFQ + R R+ + + ++++ +Y FDI
Sbjct: 286 V---KKIDVERLIVEGECVAIDKETGKPRPFQDILRRFRRKYDIGKMMKEINLRVYLFDI 342
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGF----------------FQFATTLTSIDLDE 598
LY++G + E+ RR+ L + E + + L + D E
Sbjct: 343 LYKDGISFIDEEFGNRRKVLEEIIGYENDWRTEKERIEKELKSDKIIDISYKLVTNDAKE 402
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFH 658
++F + ++ EG++IK + A Y P R K K +SLD+V A
Sbjct: 403 AREFYNWSLSIGHEGVMIKNL--KAPYTPGSRVRTMYKFKPTL-----ESLDVVITKAKR 455
Query: 659 GRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
G GKR YG+F +A D + I +GTG +E+ LE
Sbjct: 456 GMGKRKDWYGSFEIAVRDEEGNLY-PIGHVGTGLTESDLE 494
>gi|383784016|ref|YP_005468584.1| DNA ligase [Leptospirillum ferrooxidans C2-3]
gi|383082927|dbj|BAM06454.1| putative DNA ligase [Leptospirillum ferrooxidans C2-3]
Length = 620
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 153/551 (27%), Positives = 253/551 (45%), Gaps = 62/551 (11%)
Query: 208 GRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEA-- 265
GR + I+ N+ + E++ P+VY+ +++P G +G+ +I+AL+E
Sbjct: 20 GRTELAGILGNLF---LRCDEEEIAPLVYVVQGQLSPPFRGEPMGMASRLLIRALSEVKA 76
Query: 266 -----------CGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRL 314
+ E + +GD G +A+ S S P L+ VF
Sbjct: 77 KKTFSDLNPEEAKKMEKSLDVMLAHLGDPGALAQEVLSQNS----PSRLSFLDVFRILER 132
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+++ G+ SQ K + + LL + +++ R + KLR+G+ + T++ AL +
Sbjct: 133 LSQMEGEGSQVDKVSELATLLSRLSPLSARFVARFVMGKLRLGVGDSTIIEALAVSGGGR 192
Query: 375 EQHS--KPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
S + NI S L + +KQ G+ +LS + +PG PI
Sbjct: 193 ATKSIVEKAYNICSDLGLVGRKIKQ-----------------GGLESLS-SLEPSPGFPI 234
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
L + +I+ K + E KYDG R QIH + G VEI+SRN + T FP+
Sbjct: 235 RVALCERLSSGEDIIAKIG--RCSIESKYDGFRCQIHIIA-GKVEIFSRNLDSMTSMFPE 291
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYA 551
+V A + RS + + E + D E PFQ TR RK NV +++ + +
Sbjct: 292 IVRATKEIFGN--RSAIFEGEALGIDPETGTYQPFQVTITRKRKHNVLEKSLEIPLRLLV 349
Query: 552 FDILYRNGQPLLQEQLRVRREHL--------YDSFEEE---PGFFQFATTLTSIDLDEIQ 600
FD+LY +G ++ RR + +D E E G + + + + ++
Sbjct: 350 FDLLYLDGVSWMERPFFERRAKVETLFGAEKFDILEVERPPAGVIGSSRLIFTDEASKVN 409
Query: 601 KFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
+F + V+ EG+I K +D Y R+ NW+KLKK Y I D+LDLV I + G+
Sbjct: 410 EFFEEVVEEGFEGIIAKRLD--GIYTAGSRNFNWIKLKKSYQGKISDTLDLVIIGYYLGK 467
Query: 661 GKRTGV-YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFA 719
G+R + GA L A +D +++ F SI +IG+G +E S+ LR V+P+ RP +
Sbjct: 468 GQRLKLGIGAILAAVWDRDSKSFASIARIGSGLTEEKWMMLSAMLREIVVPE-RPVDVMS 526
Query: 720 DTISPDVWFEP 730
D + PD W P
Sbjct: 527 DVV-PDFWVLP 536
>gi|410670023|ref|YP_006922394.1| DNA ligase I, ATP-dependent Dnl1 [Methanolobus psychrophilus R15]
gi|409169151|gb|AFV23026.1| DNA ligase I, ATP-dependent Dnl1 [Methanolobus psychrophilus R15]
Length = 574
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 161/546 (29%), Positives = 253/546 (46%), Gaps = 53/546 (9%)
Query: 202 MISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKA 261
MI G + +T V +L+ V +PE+L V + ++ PA E+G+G + A
Sbjct: 13 MIEATPGSLEMTSQVAELLKRV---SPEELPIVTHFVMGEVFPAWSSQEVGVGAGILYAA 69
Query: 262 LAEACGRTESHVKKQYQEMGDLGLVA--------KASRSSQSMMRKPDPLTITKVFDTFR 313
LA++ G + + ++ ++ GD+G A K + S + + ++I +VF+ F
Sbjct: 70 LAKSSGLSVNDIEGLIRDTGDIGETAVKALAKRSKGQATFSSFLEEAPDISIHEVFERFH 129
Query: 314 LIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY 373
I++ +GK SQ + ++ L AT E Y+ RL LRIG+ E + A+ A
Sbjct: 130 AISRSSGKGSQTSRIKNLQYLFNCATPDEVGYIARLAVEDLRIGVGEGIVRDAIASAF-- 187
Query: 374 NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIG 433
N+ E A ++ ++ V + A +G+ N PI
Sbjct: 188 ---------NVPVATVERAFMLTNDMGLVSVTAREGGAESVEGLGLQLNR-------PIR 231
Query: 434 PMLAK--PTKGVSEIVNKFQDM-EFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGK 489
MLA+ PT I + D+ E E+K+DG R QIH +DG V +YSR E +G
Sbjct: 232 MMLAQIAPT-----IESAIADIGEAAIEWKFDGARVQIH--KDGDRVSLYSRKLEDISGS 284
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDV 547
PD+ A S K S +LD E VA D E+ + FQ + R R+ V + ++ +
Sbjct: 285 LPDI--AASIRKYVHTDSAILDGEAVAMD-ERGRPRAFQDILRRLRRKHEVDSTAKEIPL 341
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
I FDI+Y NG+ L+ L RRE L E +TS D +EI A+
Sbjct: 342 SINIFDIMYLNGEGLIDAPLVKRREMLEGCVENGDSIRVDRQVVTS-DPEEINIIYTEAL 400
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
A EG++IK + + Y P KR NWLK KK +E+ LDL I A G G+RT
Sbjct: 401 RAGHEGIMIK--NPQSPYSPGKRGKNWLK-KKPVMET----LDLAVIGAEWGYGRRTSFM 453
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVW 727
G++ LAC+D F + K+ TGFS+ L E ++ ++ + + +V
Sbjct: 454 GSYALACHDPKTGRFLPVGKVATGFSDEQLSELTAVFSDLIVMQSGTKIELKPQVIFEVA 513
Query: 728 FEPTER 733
FE ++
Sbjct: 514 FEEIQK 519
>gi|298674833|ref|YP_003726583.1| ATP-dependent DNA ligase I [Methanohalobium evestigatum Z-7303]
gi|298287821|gb|ADI73787.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalobium evestigatum
Z-7303]
Length = 569
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 265/551 (48%), Gaps = 48/551 (8%)
Query: 207 TGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLELGIGDASIIKALAEA 265
T + +TD V ++L V D +PVV + +I P+ ELGIG++ + AL++A
Sbjct: 18 TSSLEMTDQVADLLAKV----DTDELPVVTHFIMGQIFPSWSSQELGIGESLLYTALSKA 73
Query: 266 CGRTESHVKKQYQEMGDLGLVA-----KASRSS---QSMMRKPDP-LTITKVFDTFRLIA 316
G + ++ ++ GD+G A K SR+ S + +P P +TI +V D + IA
Sbjct: 74 SGLSVDDIENIIRDTGDIGETAVRALSKLSRNQVTFSSFVEEPTPQITILEVSDRLKRIA 133
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
+GK SQ +K ++ L A++ E +YL RL +LRIG+ E + A+ +A
Sbjct: 134 NVSGKGSQNQKVKNLQYLFNASSPEEARYLSRLAVEELRIGVGEGIVRDAISKA------ 187
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
P+E+ +++ F + + A G +S P+ ML
Sbjct: 188 -------FNVPVEK----LERSFMLTNDLGAVAVAAQQGGEEEVSK-LDIQVNRPVRMML 235
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
A+ T + N+ E+K+DG R QIH ++ V I+SR E T PD+V +
Sbjct: 236 AQVTPSIETAFNEMGTA--AIEWKFDGARVQIHKDKE-EVNIFSRKLENVTNSLPDIVES 292
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVCIYAFDI 554
V + + + ++D E VA D E + FQ + R R+ +V + ++ + + FD+
Sbjct: 293 VK--NQLNADTAIIDGEAVAID-EDGRPRAFQDILRRFRRKYDVLSTSKEIPIILNMFDL 349
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGL 614
+Y +G+ + L+ RRE L + E LTS D++E + + A+ A EG+
Sbjct: 350 MYLDGESYIDLPLKYRREILGNIVENTKSIKVDKQILTS-DVEEANRVYNNALSAGHEGI 408
Query: 615 IIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLAC 674
+IK + ++ Y P KR NWLK K I ++LDLV I G G+R + G++ +AC
Sbjct: 409 MIK--NPESPYSPGKRGKNWLKKK-----PIMETLDLVVIGGEWGYGRRANLIGSYAIAC 461
Query: 675 YDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERP 734
YD + ++ I K+ TG ++ LEE +S ++ + F I ++ FE ++
Sbjct: 462 YDRDRGQYLPIGKVATGITDEKLEELTSLFSDLIVSEKGRKIEFKPEIVFEIGFEEIQKS 521
Query: 735 ETSNSPASIVY 745
S ++ +
Sbjct: 522 NNYESGYALRF 532
>gi|333910204|ref|YP_004483937.1| DNA ligase [Methanotorris igneus Kol 5]
gi|333750793|gb|AEF95872.1| DNA ligase [Methanotorris igneus Kol 5]
Length = 576
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 147/533 (27%), Positives = 255/533 (47%), Gaps = 58/533 (10%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMET-TPEDLVPVVYLAANKIAPAHEGLELGIGDAS 257
+++ I N T R+ D ++ V + P+DL + YL ++ P ++ ELGIG
Sbjct: 9 IYNKIENTTKRLEKRDYFIKLIDKVKHSGKPKDLKKICYLTIGRVFPEYDERELGIGSKL 68
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS---QSMMRKPDPLTITKVFDTFRL 314
+I A+ + G E + ++ +E GD+GL + +SS S+ KP L + +V++T R
Sbjct: 69 LIGAIV-STGIKEKELLEKIKETGDIGLAIEKLKSSIKQVSLFTKP--LEVDEVYETLRK 125
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+A+ G+ SQ+KK I +L + A+ E +YL R++ +RIG+ T++ AL ++Y
Sbjct: 126 VAEIEGEQSQKKKLRHISSLFLRASPIESRYLARVILEDMRIGMNIPTIIEAL---SLY- 181
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
P E+ +I + + EK++ L S PI P
Sbjct: 182 ---------FNVPKEKLERIYAVTNDIGLLAEKLMEEDLD------SEELKLRVFRPIKP 226
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLA+ + + +N+ + +F E KYDG R QIH +DG V+IYSR E T P++
Sbjct: 227 MLAQLVPSIKDAINEMKMPQF--ETKYDGARVQIHK-KDGKVKIYSRRLEDVTNAIPEIR 283
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAF 552
A+ +L+ +F+++ E VA D K PFQ + R R+ + + ++++ +Y F
Sbjct: 284 EAIEKLEAD---NFIIEGECVAIDTSTGKPRPFQDILRRFRRKYDIDKMMKEINLRVYLF 340
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGF----------------FQFATTLTSIDL 596
D+LY G+ + L RR+ L + E + + L + D+
Sbjct: 341 DVLYYKGREFIDLPLSERRKTLEEILGIENDWRKDREKIERELKSKKIIDISYKLITDDV 400
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAA 656
+E ++F ++ EG++IK + DA Y P R K K ++LD+V A
Sbjct: 401 EEAEEFYKWSLGIGHEGVMIKNL--DAIYTPGSRVRTMYKFKPTL-----ENLDVVITKA 453
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
G GKR +G++ ++ D + SI +GTG +E LE + + +I
Sbjct: 454 KRGMGKRKDWFGSYEISVRDEEGNLY-SIGHVGTGLTEDDLERLTKMINEIII 505
>gi|20091397|ref|NP_617472.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
gi|22256752|sp|Q8TMT1.1|DNLI2_METAC RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|19916535|gb|AAM05952.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
Length = 568
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 248/509 (48%), Gaps = 49/509 (9%)
Query: 210 ILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRT 269
I T+ V ++L+ V E+L + +++ PA G +LGIG + + +L++A G +
Sbjct: 21 IETTNKVADLLKKV---DVEELPLATHFIMSEVFPAWSGEQLGIGTSLLYSSLSKASGMS 77
Query: 270 ESHVKKQYQEMGDLG----LVAKASRSSQ----SMMRKPDPLTITKVFDTFRLIAKEAGK 321
++ + GD+G L+ K R +Q S + + L+IT+V+ F+ ++ +GK
Sbjct: 78 VRSIESLIRTTGDIGETALLILKEKRKNQVTFSSFLEEQPELSITEVYQRFKTASEASGK 137
Query: 322 DSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPP 381
SQE K ++ L ++T E +Y+ RL +LRIG+ E + A+ +A S P
Sbjct: 138 GSQELKIKNLQFLFNSSTPREAKYISRLALEELRIGVGEGVVRDAIARA------FSVPS 191
Query: 382 PNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTK 441
+ E A + + IV A +G + PI ML++ +
Sbjct: 192 DKV----EHAFMVTNDL--------GIVAAAAKEGGIEALESLGIEINRPIKMMLSQIS- 238
Query: 442 GVSEIVNKFQDMEFTC-EYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRL 500
+I +DM+ E+K+DG R QIH SV ++SR E T PD+V +
Sbjct: 239 --PDIDADIRDMKGAAIEWKFDGARVQIHK-NGNSVTLFSRKLENVTNSLPDLVEIIR-- 293
Query: 501 KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD--IKVDVCIYAFDILYRN 558
K S +LD E VA D E K FQ + R R+ + + + + + + FDI+Y N
Sbjct: 294 KHVKAESAILDGEAVAVD-ENGKPRAFQEILKRFRRKYDVEEKALGIPIQLNLFDIMYLN 352
Query: 559 GQPLLQEQLRVRREHLYDSFE---EEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLI 615
G+ L+ L RR+ L E E+ + + DL+ ++K A++A EG++
Sbjct: 353 GRTLIDLPLVERRKALESCVESSVEDSKSISVDEQVITGDLELVEKIYREALNAGHEGVM 412
Query: 616 IKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY 675
+K + ++ Y P KR NWLK KK +E+ LDLV + A G G+R + G++ +ACY
Sbjct: 413 VK--NPNSAYSPGKRGKNWLK-KKPLMET----LDLVVVGAEWGYGRRANLIGSYSVACY 465
Query: 676 DSNNEEFQSICKIGTGFSEAMLEERSSSL 704
D F + K+GTG ++ L+E + L
Sbjct: 466 DPETSRFLQVGKVGTGLTDEQLKELTEML 494
>gi|325960182|ref|YP_004291648.1| DNA ligase [Methanobacterium sp. AL-21]
gi|325331614|gb|ADZ10676.1| DNA ligase [Methanobacterium sp. AL-21]
Length = 560
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 244/512 (47%), Gaps = 47/512 (9%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
V++ + + T R+ T I+ + E L V L+ ++ P ELGIG +
Sbjct: 16 VYEELDSTTKRLEKTSILAKFFNEIGNEDSELLPVVTLLSLGRVFPTWSEEELGIGSKLL 75
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMM--RKPDPLTITKVFDTFRL 314
+KA+A G V+ + ++ GD+G A+ S+ Q+ + RK LTI KV
Sbjct: 76 MKAIALVVGVKPEEVEDKQRDAGDIGRAAQELFSKKKQATLFSRK---LTIKKVRSNLMK 132
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+A +G +Q KK ++ LL +A+ E +Y+ R + +LR+G+ E T+ AL QA +
Sbjct: 133 MATVSGNRAQSKKLEILRELLSSASPTEAKYITRTVIEELRVGVGEGTIRDALSQAFGVD 192
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
+ + + + L A++ K+ +GV L S PG P+ P
Sbjct: 193 KAIVERAHMLTNDLGLVAEVSKE-----------------EGVEGLQK-LSLNPGKPVKP 234
Query: 435 MLAKPTKGVSEIVNKFQDMEFT-CEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDV 493
MLA+ + G+ +M + CE KYDG R QIH L D V +++R E + P++
Sbjct: 235 MLAQLSPGIE---TSITEMGWAFCETKYDGIRVQIHRLGD-EVNVFTRRLENISNAVPEI 290
Query: 494 VLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV--CIYA 551
V + K ++F+++ EI+ K + FQ + R R+ + ++ +V +Y
Sbjct: 291 VEYIK--KDLPHKNFIVEGEIIV--TRDGKPISFQYILQRVRRKYDIERMRNEVPLKLYL 346
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFA--TTLTSIDLDEIQKFLDAAVDA 609
FD+LY G+PLL RRE L P + + +TS + E Q + ++
Sbjct: 347 FDVLYY-GEPLLDAPFEKRREVLESIVNITPDKIELSEQVKVTSESVQEAQDLFNNSIKG 405
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EG++IK D A Y P R LK K + ++LDLV + +G+GKR G+
Sbjct: 406 GHEGIMIK--DPTAPYIPGIRGKKMLKFKAE-----PETLDLVVVGGTYGKGKRAHFIGS 458
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERS 701
+LLA D +N EF+++ TG + L+E S
Sbjct: 459 YLLAAQDEDN-EFKTLAHAATGLDDKTLQELS 489
>gi|91773076|ref|YP_565768.1| DNA ligase I, ATP-dependent (dnl1) [Methanococcoides burtonii DSM
6242]
gi|121691786|sp|Q12X08.1|DNLI_METBU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|91712091|gb|ABE52018.1| DNA ligase 1, ATP-dependent [Methanococcoides burtonii DSM 6242]
Length = 567
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 155/534 (29%), Positives = 249/534 (46%), Gaps = 55/534 (10%)
Query: 212 ITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES 271
+TD+V +ML+++ + E+L V + + PA +LG+G + + AL+E+ G +
Sbjct: 23 MTDVVSDMLKSI---STEELPVVTHFVMGDVFPAWSVEQLGVGTSLLYSALSESSGLSLK 79
Query: 272 HVKKQYQEMGDLGLVAKAS-----------RSSQSMMRKPDP---LTITKVFDTFRLIAK 317
++ + GD+G A A+ ++S S + ++I VF+ F I++
Sbjct: 80 EIEDLVRSTGDIGETAVAALGKKKKNKKKNQASLSFFSEDAASVSISIMDVFERFLDISR 139
Query: 318 EAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH 377
+G SQ K ++ L +++ E +YL RL LRIG+ E + A+ +A
Sbjct: 140 YSGAGSQSSKMRNLQFLFNSSSSEEARYLARLTIEDLRIGVGEGIVRDAISKA------F 193
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
P +I E ++ ++ V K G+ +S PI MLA
Sbjct: 194 DVPAGDI-----ERGFMLTNDLGLVAVAAK------EGGIEEISK-LRMELDRPIKMMLA 241
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ T + + + E+K+DG R QIH D S+ I+SR E T PD+V AV
Sbjct: 242 QVTPSIEAAIKDLGML--AVEWKFDGARVQIHKKGD-SINIFSRRLENVTLSLPDIVEAV 298
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDIL 555
K S +L+ E VA D E FQ + R R+ + + ++ + + FDIL
Sbjct: 299 KLHVKAD--SAILEGEAVAVD-ENGAPRAFQDILKRFRRKYDVETMVREIPLTLNLFDIL 355
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLI 615
Y NG L+ + L RRE L E LT D++ + AA++ EG++
Sbjct: 356 YLNGDVLMDQSLLRRREQLVACVENCDSIKVDEQVLTD-DVNVVNDIYAAALNGGHEGVM 414
Query: 616 IKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY 675
+K + +A+Y P KR NWLK K I ++LDLV IAA G GKR + G++ LAC+
Sbjct: 415 LK--NPEASYSPGKRGKNWLKKKP-----IMETLDLVVIAAEWGYGKRANLIGSYALACF 467
Query: 676 DSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
D + +F I K+ TGFS+ L E + +I + + PDV FE
Sbjct: 468 DPEDGKFLPIGKVATGFSDEQLAELTEVFSELIIGESGREIE----LKPDVVFE 517
>gi|406993941|gb|EKE13018.1| hypothetical protein ACD_13C00106G0011 [uncultured bacterium]
Length = 563
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 145/534 (27%), Positives = 254/534 (47%), Gaps = 52/534 (9%)
Query: 209 RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR 268
R+ IT I+ N+L+ ET ++ VV+L+ +AP +EG L + + +I+ L G+
Sbjct: 19 RLEITRILSNLLK---ETPTSEIDKVVFLSLGILAPNYEGTILNLAEKMMIRVLMLGFGK 75
Query: 269 TESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKK 328
+E+ VK Y+ GDLG VA+ Q + K LT+ +V+D IA++ G SQ++K
Sbjct: 76 SENEVKVLYKASGDLGNVAEELGKRQGV--KDKSLTVAEVYDKLLEIAEDGGGGSQDRKI 133
Query: 329 NRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPL 388
++ +L +Y+ R+ +LR+G +E+T++ AL + E+ + NI+ +
Sbjct: 134 EKMAKILTEIDPLSARYIARIPVGRLRLGFSEKTVIDALSSESGIPEREIENAFNIRPNI 193
Query: 389 EEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP--GIPIGPMLAKPTKGVSEI 446
A++VK+ N P G+P+ PMLA+ +
Sbjct: 194 GYIARLVKE-----------------------KNIKDAKPEIGVPVVPMLAQRLNSTDAM 230
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYL-EDGSVEIYSRNAER-NTGKFPDVVLAVSRLKKPS 504
+ K + + E K+DG R IHY +D V+I++RN N FP++ V + K S
Sbjct: 231 IKKMG--KVSVEPKFDGLRIFIHYRKKDNLVKIFTRNMNAINLDTFPELK-DVGKYIKAS 287
Query: 505 VRSFVLDCEIVAYDREKQKILPFQ-TLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLL 563
+LD E + D ++ L FQ T+ R + + + ++ + FDIL +G+ L+
Sbjct: 288 --EAILDSEAIGVDPKRAMFLDFQKTIQRRRKHEIEKNASEIPLQFQVFDILLFDGKSLI 345
Query: 564 QEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDA 623
RR + + + + D + I+ + + EG+++K +
Sbjct: 346 GVPYTERR-GILEKVAVNGSLLRVDENTITNDPEVIKNMHEKYLKMGLEGVVVKKA--NG 402
Query: 624 TYEPSKRSLNWLKLKKDYIES----IGDSLDLVPIAAFHGRGKRTGV-YGAFLLACYDSN 678
TY + NW+K+K+ +E + D++D V + G+GKRTG G FL D +
Sbjct: 403 TYVSGRTGWNWVKMKE--VEGKRGKLSDTIDCVIMGYTSGKGKRTGFGMGQFLAGIRDGD 460
Query: 679 NEEFQSICKIGTGFSEAMLEERSSSL-RSKVIPKPRPYYRFADTISPDVWFEPT 731
F+S+ K+GTG S+ E + L + +V KP+ Y D + PD W P+
Sbjct: 461 T--FKSVTKVGTGLSDEQFRELKARLTKIQVKEKPKEYIVNKD-LYPDFWVTPS 511
>gi|386002175|ref|YP_005920474.1| DNA ligase [Methanosaeta harundinacea 6Ac]
gi|357210231|gb|AET64851.1| DNA ligase [Methanosaeta harundinacea 6Ac]
Length = 560
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 239/511 (46%), Gaps = 52/511 (10%)
Query: 208 GRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG 267
G I D++ + LR + E E+L V PA L LG+G +++ AL++A G
Sbjct: 19 GSIEKADLLASFLRDLEE---EELSVVPSFVMGSPFPASSDLLLGVGPSTLYDALSKAFG 75
Query: 268 RTESHVKKQYQEMGDLGLVA-----KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKD 322
S V++ + GD+G VA K S+ S + + LTI +V F LIA+ +G+
Sbjct: 76 AAPSEVQELLRRTGDVGAVAAELAKKGRSSTLSTFLEGERLTILEVHSRFLLIARASGRR 135
Query: 323 SQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP 382
SQ K ++ L A E +Y+ RL +RIG+ E + A+ +A + + +
Sbjct: 136 SQTAKMKHLRYLFSEAGATEARYMARLALEDMRIGVGEGIVRDAVAKAFGISPEEVERGY 195
Query: 383 NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKG 442
N S L A+ K+ + G PI MLA+ G
Sbjct: 196 NFTSDLGLVARQAKE---------------------GRLQELTIEIGRPIKMMLAQLGSG 234
Query: 443 VSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKK 502
++ V + E KYDG R QIH + VEI+SR ER T P++V V K
Sbjct: 235 IAGSVAEMGTA--AVEVKYDGSRVQIHKRGE-EVEIFSRRLERVTRSLPEIVSFV----K 287
Query: 503 PSVRS--FVLDCEIVAYDREKQKILPFQTLSTRARKN--VSLSDIKVDVCIYAFDILYRN 558
VR+ +LD E VA E + LPFQ + R R+ V + ++ + + FD++Y N
Sbjct: 288 EGVRAEAAILDGEAVARG-EDGRPLPFQEILKRFRRKYRVEGAAKRIPLELMLFDLIYLN 346
Query: 559 GQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKT 618
G+ L+ E LR RR L +S +E A + D +E+ + A+ EG+++K+
Sbjct: 347 GRVLIDEPLRERR-RLLESVADEK---ILAGQKVTDDPEEVAGIYEEAIAEGHEGVMLKS 402
Query: 619 MDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSN 678
+ + Y P KR NWLK+K + ++LDLV I A G G+R +G++ LA D
Sbjct: 403 PE--SPYAPGKRGKNWLKIK-----PVMETLDLVVIGARWGEGRRATFFGSYRLASPDPE 455
Query: 679 NEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
+ + + TG ++ ML E + R V+
Sbjct: 456 TGRLEDVGWVATGITDEMLAELTELFRDLVL 486
>gi|374630682|ref|ZP_09703067.1| DNA ligase [Methanoplanus limicola DSM 2279]
gi|373908795|gb|EHQ36899.1| DNA ligase [Methanoplanus limicola DSM 2279]
Length = 549
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 153/547 (27%), Positives = 258/547 (47%), Gaps = 65/547 (11%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
FI S D + + +GR+ + D++ L + + ED+ + ++ P + ++G
Sbjct: 3 FIDFSEFCDTLESISGRLEMIDLIAEKLPGL---SDEDMPVFLRFITGRVFPDYSQDKIG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLG-----LVAKASRSSQSMMRKPDPLTITK 307
IG + +++A G+ +V ++ GD+G L+AK ++S D L ++
Sbjct: 60 IGPNHVYESVAYVIGKNRDYVIRKINTGGDVGKAVENLLAKKEQTSFF----SDTLELSG 115
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
VF F+ I++ G SQ++K +K L A E +YL R++ ++RIG+ + + A+
Sbjct: 116 VFSDFKAISEVKGSRSQKEKLKFVKRLFANAKPIEGRYLARIMLGEMRIGVGDGNVREAV 175
Query: 368 GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
+A S P + +E A + V + V ALL
Sbjct: 176 AKA------FSVPA----ALVEHAYQAVNDLGEV---------ALLAKRGEKALEEVKIE 216
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNT 487
P+ MLAK ++E++ + E+KYDG R Q H D +IYSR E T
Sbjct: 217 LFRPVKMMLAKQGT-IAEMIR--EQGSIAAEFKYDGTRFQFHKRGD-EFKIYSRKLEEVT 272
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV 547
PD+ + + V +LD EI+A + K +PFQ + R R+ DI+ V
Sbjct: 273 DAMPDISELLMNCTEHDV---ILDGEIIAV--KDGKPMPFQYVLKRFRRR---HDIEAHV 324
Query: 548 -----CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
FDIL + + L+++ RR L ++ E A + S D+ E+++F
Sbjct: 325 ENIRLIPNVFDILLLDNESLIEKPFTGRRRILEENVRE-----YIAPQIVSGDIAEVEEF 379
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+D EG+++K++ A Y P +R W+K+K + D++DL I A G GK
Sbjct: 380 YRDALDEGHEGIMVKSLS--AAYTPGQRVREWIKIKPEV-----DTIDLAVIGAEWGEGK 432
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G++G+FLLAC D N+E + + K+ TG S+ ML SL+ VI + + RF
Sbjct: 433 RAGLFGSFLLACRDENDELY-PVSKVATGISDEMLALIYDSLKESVISESGKFVRF---- 487
Query: 723 SPDVWFE 729
P++ FE
Sbjct: 488 EPEIVFE 494
>gi|410720583|ref|ZP_11359937.1| ATP-dependent DNA ligase I [Methanobacterium sp. Maddingley MBC34]
gi|410600710|gb|EKQ55235.1| ATP-dependent DNA ligase I [Methanobacterium sp. Maddingley MBC34]
Length = 557
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 263/549 (47%), Gaps = 44/549 (8%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
V+ + + T R+ TDI+ V + PE L V L+ +I P ELGIG +
Sbjct: 9 VYQDLDSTTKRLEKTDILAKFFAKVGDEDPELLPIVTLLSLGRIFPTWSEEELGIGSKLL 68
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRK-PDPLTITKVFDTFRLIAK 317
+KA+++A G + V+ + ++ GD+G A+ +S + PLTI KV +A+
Sbjct: 69 MKAISQAVGVSPEDVENRMRDTGDIGEAAEELYQKKSQVTLFSRPLTIVKVHRNLVKMAE 128
Query: 318 EAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH 377
+G +Q KK + + LL +A+ E +Y+ R + +LR+G+ E T+ A+ QA
Sbjct: 129 ISGNRAQFKKIDYLMELLSSASPSEAKYITRTVLEELRVGVGEGTIRDAISQAF------ 182
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
+I + E A ++ ++ ++ +G L + PG P+ PMLA
Sbjct: 183 -----DIPKEVAERAHMLTNDMGLVAEVARM------EGEEGLRK-LTLKPGKPVKPMLA 230
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ + G++ V + CE KYDG R QIH D ++I++R E + P++
Sbjct: 231 QLSPGINVSVGEMG--WAICETKYDGIRVQIHRHGD-KIDIFTRRLENISLALPEI---- 283
Query: 498 SRLKKPSV--RSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFD 553
S K S+ F+++ EI+A K + FQ + R R+ + + K+ + +Y FD
Sbjct: 284 SDYIKQSLPQEDFIVEGEIIA--SRDGKPISFQYMLQRVRRKYEIDKMISKIPLTVYLFD 341
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFA--TTLTSIDLDEIQKFLDAAVDASC 611
+LY G P+L E L+ RR+ L + G + + +T ++ + Q + ++
Sbjct: 342 VLYYRG-PILDEPLQERRKTLESIVKVAEGKLELSAQVKVTPEEIYKAQDLFERSIKGGH 400
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
EG++IK D A Y P R LKLK + ++LDLV + +G+GKR G++L
Sbjct: 401 EGIMIK--DPHAPYMPGIRGKKMLKLKAE-----PETLDLVVVGGTYGKGKRAHFIGSYL 453
Query: 672 LACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF-EP 730
+A D +N + +++ TG + L E S + +I K + ++ ++ F E
Sbjct: 454 MALQDEDN-QLKTLAYAATGLDDNTLMELSQMVEPLIISKDGRQVKIEPSVILEIAFSEI 512
Query: 731 TERPETSNS 739
E PE+
Sbjct: 513 VESPESETG 521
>gi|327400477|ref|YP_004341316.1| DNA ligase [Archaeoglobus veneficus SNP6]
gi|327315985|gb|AEA46601.1| DNA ligase [Archaeoglobus veneficus SNP6]
Length = 556
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 229/466 (49%), Gaps = 37/466 (7%)
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-K 288
DL VV K+ P + ELG+G I +AL A G S +++ +E GDLG+ A K
Sbjct: 38 DLYNVVLFLMGKVYPPWDERELGVGVGLIYEALRVATGTNRSKIEELIKETGDLGIAAEK 97
Query: 289 ASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIR 348
++ + + LT+ KV + F ++ G+ SQ++K + L +AT E +YL R
Sbjct: 98 LLQTKTQLTLFEEELTVAKVREVFDTMSSLTGEGSQKRKIRLLADLYFSATPIEARYLTR 157
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
L+ S++R+G+ E + A+ +A I+ L E A ++ F + V K
Sbjct: 158 LILSEMRLGVGEGIVRDAIARAW-----------GIEEALVERAYMITNDFGKVAVVAK- 205
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+G L +P+ MLA+ + + + + + + E+K+DG R Q+
Sbjct: 206 -----NEGKEGLEK-MKIELHVPVRMMLAQVAESIDQAIREMSRV--AVEWKFDGTRVQV 257
Query: 469 HYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQ 528
H+ +G V IYSR E T P++V + K V +LD E+VA ++ + +PFQ
Sbjct: 258 HW-GNGKVTIYSRRLENVTRALPEIVEEIKSNVKEGV---ILDGEVVAM--KEGRPMPFQ 311
Query: 529 TLSTRARKNVSLSDIKVDVCIYA--FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
+ R R+ +S + + I+A FDILY +G+ ++ L RR+ L +S
Sbjct: 312 HILRRFRRKYEVSKMMEKIPIHAQFFDILYCDGKEVIDLPLEERRK-LLESVVRSSDRIW 370
Query: 587 FATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIG 646
A + + D I++ + A++A EG ++K + + Y P KR +WLKLK +
Sbjct: 371 VAKQVVTSDAAVIEQVYNEALNAGHEGAMLK--NPKSPYIPGKRGKHWLKLK-----PVM 423
Query: 647 DSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGF 692
++LDLV I G GKR+ V ++ +AC D + + K+ TGF
Sbjct: 424 ETLDLVVIGGEWGEGKRSHVISSYEIACLDPTTGKLLPVGKVATGF 469
>gi|374636628|ref|ZP_09708188.1| DNA ligase I, ATP-dependent Dnl1 [Methanotorris formicicus Mc-S-70]
gi|373558406|gb|EHP84751.1| DNA ligase I, ATP-dependent Dnl1 [Methanotorris formicicus Mc-S-70]
Length = 572
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 147/531 (27%), Positives = 251/531 (47%), Gaps = 54/531 (10%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMET-TPEDLVPVVYLAANKIAPAHEGLELGIGDAS 257
+++ I N T R+ D ++ V + PEDL + YL ++ P ++ ELGIG
Sbjct: 9 IYNKIENTTKRLEKRDYFIKLINMVEDIGKPEDLKKICYLTIGRVFPEYDERELGIGSKL 68
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS-QSMMRKPDPLTITKVFDTFRLIA 316
+I A+ + G E + ++ +E GD+GL + +S + + PL I +V++T R +A
Sbjct: 69 LIGAIV-STGIKEKELLEKIKETGDIGLAIEKLKSGIKQVSLFTRPLEIDEVYETLRKVA 127
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
+ G+ SQ+KK I +L + A+ E +YL R++ +RIG+ T++ AL ++Y
Sbjct: 128 EIEGEMSQKKKLRYISSLFLRASPIESRYLARVILEDMRIGMNIPTIIEAL---SLY--- 181
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
P E+ +I + + EK++ L S PI PML
Sbjct: 182 -------FNVPKEKLERIYAVTNDIGLLAEKLMEGNLD------SEELKLRVFRPIKPML 228
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
A+ + + +N+ + +F E KYDG R QIH +DG V+IYSR E T P++ A
Sbjct: 229 AQLVPSIRDAINEMKLPQF--ETKYDGARVQIHK-KDGKVKIYSRRLEDVTNAIPEIREA 285
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDI 554
+ +L+ +F+++ E VA D K PFQ + R R+ + + ++++ +Y FD+
Sbjct: 286 IEKLEAD---NFIIEGECVAIDTSTGKPRPFQDILRRFRRKYDIEKMIKEINLRVYLFDV 342
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGF----------------FQFATTLTSIDLDE 598
LY G+ + L RR+ L + E + + L + D E
Sbjct: 343 LYYKGREYIDLSLSDRRKTLEEILGIENDWRKDREKIERELKSKKIIDISYKLVTDDAKE 402
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFH 658
+KF ++ EG++IK + DA Y P R K K ++LD+V A
Sbjct: 403 AEKFYRWSLGIGHEGVMIKNL--DAIYTPGSRVRTMYKFKPTL-----ENLDVVITKAKR 455
Query: 659 GRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
G GKR +G++ ++ D + SI +GTG +E LE + + +I
Sbjct: 456 GMGKRKDWFGSYEISIRDEEGNLY-SIGHVGTGLTEEDLERLTKMIDEIII 505
>gi|333986415|ref|YP_004519022.1| DNA ligase [Methanobacterium sp. SWAN-1]
gi|333824559|gb|AEG17221.1| DNA ligase [Methanobacterium sp. SWAN-1]
Length = 561
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 143/526 (27%), Positives = 251/526 (47%), Gaps = 42/526 (7%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
++ L V++ + + T R+ T I+ + + PE L V ++ +I P ELG
Sbjct: 9 YMELVEVYEALDSTTKRLEKTSILAKFFKIMGNEEPELLPIVTLMSLGRIFPTWSEEELG 68
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFD 310
+G ++KA++ G V+ ++ GD+GL A+ R QS + PLTI KV
Sbjct: 69 LGSKLLMKAISLVAGVGPDDVENMTRDAGDIGLAAETLLKRKQQSTLFARQPLTIEKVHS 128
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
I K +G +Q KK ++ L +A+ E +Y+ R + +LR+G+ E T+ A+ +A
Sbjct: 129 NLIKITKISGNRAQNKKMEILRELFSSASPKEAKYITRTVLEELRVGVGEGTIKDAISEA 188
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
+ + + + L A++ K+ +G L + PG
Sbjct: 189 FEVEKTAVERAHMLTNDLGLVAEVAKE-----------------EGEEGLGK-LTLKPGK 230
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFT-CEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
P+ PMLA+ + G+ V ++M + CE KYDG R QIH L D + I++R E +
Sbjct: 231 PVKPMLAQLSPGIKISV---EEMGWALCETKYDGIRVQIHRLGD-DINIFTRRLENISNA 286
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDV 547
P++V + R P+ F+++ EI+ K + FQ + R R+ + + KV +
Sbjct: 287 VPEIVEYI-RKSLPAC-DFIVEGEIIV--TRDGKPISFQYILQRVRRKYDIEKMREKVPL 342
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI--DLDEIQKFLDA 605
+Y FD+LY +G P + RR L + ++ + + ++ + + A
Sbjct: 343 KLYLFDVLYYDG-PQIDTPFEERRRILESIVTVTEHKLELSSQVKTTPEEIWKAEDLFTA 401
Query: 606 AVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
++ EG++IK D A Y P R LKLK ++ ++LDLV + +G+G+R
Sbjct: 402 SIKGGHEGIMIK--DPHAPYMPGIRGKKMLKLK-----AVPETLDLVIVGGTYGKGRRAH 454
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
V G++LLA D NN +F+++ TG + ML E S + ++ K
Sbjct: 455 VIGSYLLAVRDENN-DFKTLAHAATGLDDNMLIELSRMVEPLIVKK 499
>gi|406925545|gb|EKD61995.1| hypothetical protein ACD_52C00325G0006 [uncultured bacterium]
Length = 571
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 250/530 (47%), Gaps = 33/530 (6%)
Query: 207 TGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEAC 266
+ RI IT I+ +L+ +T D VYL +AP++ + + + +I+ LA+A
Sbjct: 17 SSRIEITKILAELLK---KTGRTDADKTVYLLLGILAPSYRSIVFNLAERMMIEVLAKAY 73
Query: 267 GRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEK 326
+ V+K Y+ +GDLG +A+ ++ + ++++V++ IAK G+ S
Sbjct: 74 KTSAGSVRKLYKSVGDLGNIAERLAQISNLKSQISKSSVSEVYNELVKIAKIEGEGSVGH 133
Query: 327 KKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQS 386
K + + L+ ++++R+ +LR+G +++TLL AL + E K +++S
Sbjct: 134 KTDSLAVLISKLDPLSAKFVVRIPLGRLRLGFSDKTLLDALS----WMEAGDK---SLKS 186
Query: 387 PLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEI 446
L++A + V+P + + GV + G+P+ PMLA+ K E+
Sbjct: 187 QLDKA-------YEVIPDVGLLAKQVKELGVARATKDVMPIVGVPVMPMLAQRLKNPEEM 239
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
+ K + E K+DG R IH+ ++ ++RN + FP++ + R + +
Sbjct: 240 IAKMG--KVAVEPKFDGLRLLIHFKRPSFIKAFTRNLNDVSDMFPELS-DIGRF--LNAK 294
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQE 565
+LD E V D KI FQT R RK ++ L K+ V FD+++R+G+ + E
Sbjct: 295 EVILDAETVGMDPNLAKIADFQTTMQRRRKHDIELLKSKIPVAFQIFDLIFRDGKSFMGE 354
Query: 566 QLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATY 625
RR L + +E F +T EI++ VD EG+I+K D+ Y
Sbjct: 355 PYTKRRNVLEKTIKENKTFVVDDYWITE-SAQEIKRRHREMVDDGLEGVIVKRA--DSKY 411
Query: 626 EPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRTGV-YGAFLLACYDSNNEEF 682
P + W+K+K + D+LD V + GRGKR G FL+ E+F
Sbjct: 412 VPGRTGWRWVKMKGAVGSEGKLADTLDCVVLGYSAGRGKRAAFGVGQFLVGV--RKGEKF 469
Query: 683 QSICKIGTGFSEAMLEERSSSLRS-KVIPKPRPYYRFADTISPDVWFEPT 731
++ KIGTG S+ E + L+ K+ KP+ + + PD W EP
Sbjct: 470 VTVTKIGTGLSDEEFRELNRRLQKIKLRDKPKE-FEVHKNLEPDNWVEPV 518
>gi|76154166|gb|AAX25660.2| SJCHGC08518 protein [Schistosoma japonicum]
Length = 254
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 122/195 (62%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W++GE VP++ L+ F+ I + RI IT+ + N R+V +P D+ VYL N++ P
Sbjct: 33 WKEGESVPYLSLAKTFECIETTSSRIKITETLSNFFRSVGLLSPFDMTSCVYLCLNRLGP 92
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
A+EG ELG+G+ ++KALA G H++ ++ GDLG+VA+ RS Q ++ P PLT
Sbjct: 93 AYEGTELGVGETVLLKALAATTGVGIEHIRSSLKKYGDLGVVAETIRSRQKILSAPKPLT 152
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I+ VF + IA +G +Q KK +++LLVA + E +YLIR L KLRIGLAEQT+L
Sbjct: 153 ISLVFSKLKNIASMSGNSAQNKKLEIVRSLLVACRESETKYLIRSLSGKLRIGLAEQTVL 212
Query: 365 AALGQAAVYNEQHSK 379
ALGQA H K
Sbjct: 213 TALGQAVAMTPFHFK 227
>gi|41615291|ref|NP_963789.1| hypothetical protein NEQ509 [Nanoarchaeum equitans Kin4-M]
gi|74579663|sp|Q74M64.1|DNLI_NANEQ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|40069015|gb|AAR39350.1| NEQ509 [Nanoarchaeum equitans Kin4-M]
Length = 567
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 225/460 (48%), Gaps = 40/460 (8%)
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKAS---RSSQSMMRKPDPLTITK 307
LGI + +I+A++ A G + V++ + + GDLG+VA+ + R + ++ KP LT+
Sbjct: 57 LGIAEKGVIRAISIAYGIEKQKVEELFIKYGDLGIVAEKACEMRKQKPLLLKP--LTVKD 114
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
V+ T R IA G+ SQ+KK LLV A E +Y++RL +LRIG+ E + A+
Sbjct: 115 VYQTLRKIADIEGEGSQDKKIITFAKLLVNAKPKEAKYIVRLALEELRIGVGEGIIRDAI 174
Query: 368 GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
A + + +I E +I K+ G+W
Sbjct: 175 AIAFSVTPEAVEYAYSILLDFGEVVRIAKEQGE--------------QGLWQ----VKLQ 216
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNT 487
G P MLA + V E + E KYDG R QIH D V +++R E T
Sbjct: 217 VGRPFRVMLAIRARNVQEAFD-IVGRPAMIEAKYDGFRLQIHKKGD-QVWLWTRRLEDVT 274
Query: 488 GKFPDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--K 544
+FPDVV V +R+K + + + E V YD++ K LPFQ +S R ++ + + +
Sbjct: 275 RQFPDVVNIVRNRVKANEI---IFEAEAVGYDKKTNKFLPFQKISQRVKRKYDIEKMAKE 331
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ V ++AFDI+Y G+ L+++ + RR L +E+ Q + + D + +F
Sbjct: 332 IPVELHAFDIVYLEGEQLMKKPFKERRALLEKVIDEKEHEIQLSIGIIEKDDKKAYQFYQ 391
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
++ EG++ K + +A Y+P +R +KLK ++LDLV +AA G GKR+
Sbjct: 392 DCLNKGLEGVMFKNL--NAPYQPGRRVGYMVKLKPTL-----ETLDLVIVAAEWGEGKRS 444
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
G +F +A D + + + ++GTG E +ER+ +
Sbjct: 445 GWLTSFTVAALDKDTGNYLEVGEVGTGIKEK--KERAEDI 482
>gi|409730230|ref|ZP_11271816.1| DNA ligase (ATP) [Halococcus hamelinensis 100A6]
gi|448723593|ref|ZP_21706110.1| DNA ligase (ATP) [Halococcus hamelinensis 100A6]
gi|445787429|gb|EMA38173.1| DNA ligase (ATP) [Halococcus hamelinensis 100A6]
Length = 556
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 236/479 (49%), Gaps = 30/479 (6%)
Query: 230 DLVP-VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLG-LVA 287
DL+P + LA ++ + E +LG+ + ++AL++A G + +E GDLG A
Sbjct: 35 DLLPELTGLARGRVFASWEPDDLGVSSSLTVRALSDATGVDADRIGDWRRETGDLGDAAA 94
Query: 288 KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLI 347
KA + L++ +V+DT R +A G SQ + + I LL A+ E +Y++
Sbjct: 95 KAVENRVQTTLFSGSLSVRRVYDTLRGLATYEGPGSQTRATDDIADLLGDASSDEARYVV 154
Query: 348 RLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK 407
R + +R+G+ E T+ AL +A + + ++A + V++ + V + +
Sbjct: 155 RTIVGTMRLGVGEGTIRDALARAFLDD-------------ADDAVRAVERAYEVTNDF-R 200
Query: 408 IVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQ 467
+V D + P+ MLA+ +G+ + + + EYKYDG R +
Sbjct: 201 VVGETARDRGREGLDELEAELFRPVKAMLARKAEGLEDALESIE--RPLLEYKYDGMRVK 258
Query: 468 IHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
IH ++ + +++R E T +FPDVV AV + + + V++ E+V YD E + +PF
Sbjct: 259 IH-VDGDEIRVFTRRLEDVTEQFPDVVEAVR--DEVTAETAVVEAEVVGYDPETGRPIPF 315
Query: 528 QTLSTRARKNVSLSDIKVD--VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFF 585
Q S R ++ + ++ V ++AFD+LY + PL++ L R L +
Sbjct: 316 QEFSKRIKRKTDIDELAAAHPVTVHAFDLLYHDDDPLVEAALSDRLSRLEAVIDPGSETV 375
Query: 586 QFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESI 645
A + + L+ ++F A+DA EGL++K + DA Y+P R LK+K
Sbjct: 376 VRAEHVRTDALETAEEFYGDALDAGQEGLMVKNL--DAGYQPGSRVGYMLKVKPTM---- 429
Query: 646 GDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ LDLV + A G+++ G LAC+D++ EE + + ++ +G ++A L E + L
Sbjct: 430 -EPLDLVVVQAKWSAGRKSEWLGRLRLACWDADCEELREVGRMFSGLTDAELREITEKL 487
>gi|288559702|ref|YP_003423188.1| ATP-dependent DNA ligase DnlI [Methanobrevibacter ruminantium M1]
gi|288542412|gb|ADC46296.1| ATP-dependent DNA ligase DnlI [Methanobrevibacter ruminantium M1]
Length = 550
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 256/534 (47%), Gaps = 50/534 (9%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
V++ + T R+ T+I+ + L+TV EDL + +A ++ P E GIGD +
Sbjct: 9 VYEALGATTKRLEKTEILADFLKTV---ELEDLQKITLMALGRVFPPWSEEEQGIGDKLV 65
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRK-PDPLTITKVFDTFRLIAK 317
+KA+ +A G + + V+ ++ GD+G A+ ++ M PLT+ V++ R +AK
Sbjct: 66 MKAVGDAVGVSVAVVEDAIRDEGDIGAAAEKLYGKKTQMTFFSQPLTVNFVYNQLRKLAK 125
Query: 318 EAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH 377
G S KK + I LL +A+ E +Y+ R + +LRIG+ E + A+ QA ++
Sbjct: 126 ITGNRSTAKKISNILELLSSASALEAKYICRTILEELRIGVGEGIIRDAISQAFGVDKAL 185
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
++ + + L AK+ K+ DG+ L S PG P+ PMLA
Sbjct: 186 AERAHMLTNDLGLVAKVAKEEGE--------------DGLKKL----SLIPGRPVKPMLA 227
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ ++G+ +N+ CE KYDG R Q+H +D + I++R E T P+ V +
Sbjct: 228 QLSEGIEISINEMGCA--LCETKYDGIRMQVHK-KDDEITIFTRRLENVTMALPEAVDLI 284
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVCIYAFDIL 555
R P F+ + EI+A K FQ + R R+ N+ + KV + IY +D+L
Sbjct: 285 -REAFPD-EDFIAEGEIIAI--RDGKPTTFQNILQRVRRKHNIEEAMEKVPIKIYLYDLL 340
Query: 556 YRNGQPLLQEQLRVRREHLYDSFE-EEPGFFQFATTLTSID-LDEIQKFLDAAVDASCEG 613
Y +P + E + RRE L + P + D +D+ + +++ EG
Sbjct: 341 YFK-EPTIDEPIIKRREILESVVDCSNPNLALSSLVKVGPDNIDDAVDLFNKSIEGGHEG 399
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
++IK D D Y P R LKLK + ++LD V I G GKR G++++A
Sbjct: 400 IMIK--DCDEPYIPGIRGKKMLKLKAE-----PETLDAVVIGGVKGIGKRGDFIGSYVIA 452
Query: 674 CYDSNNEEFQSICKIGTGFSE---AMLEERSSSLR-----SKVIPKPRPYYRFA 719
D N+ + Q I +GTG S+ A L E+ +L+ +++ P+ + A
Sbjct: 453 LRDEND-QLQPIAHVGTGLSDDDLANLTEKMEALKITEKGTRITVHPKIVFEIA 505
>gi|257388763|ref|YP_003178536.1| ATP-dependent DNA ligase I [Halomicrobium mukohataei DSM 12286]
gi|257171070|gb|ACV48829.1| DNA ligase I, ATP-dependent Dnl1 [Halomicrobium mukohataei DSM
12286]
Length = 553
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 160/560 (28%), Positives = 260/560 (46%), Gaps = 69/560 (12%)
Query: 205 NETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAE 264
E+ I T++V +L EDL + L ++ PA+E +L IG +ALA
Sbjct: 15 GESADIATTELVAGLL----ADADEDLPILTRLVQGRVFPAYEATKLDIGPKLCYEALAR 70
Query: 265 ACGRTES--HVKKQYQEMGDLGLVAKA------------SRSSQSMMRKPDPLTITKVFD 310
A GR + ++ + ++G++G VA SQS PLT+ +V D
Sbjct: 71 AAGRNVAVDDIEARVADVGEIGAVATELDLGGQQGLAAFGAGSQS------PLTVAEVAD 124
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
IA +G S + K + L A+D E +YL R++ S++RIG+ E T+ A+ A
Sbjct: 125 ELAAIASASGSGSHDTKVETLFGLFNRASDAEARYLARIVLSEMRIGVGEGTVRDAI--A 182
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
A ++ P ++S L+ V Y + +G LS+ T G
Sbjct: 183 AAFD----APVDAVESALQ-----------VTNDYGNVARVARDEGADGLSD-LELTIGR 226
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTC-EYKYDGERAQIHYLEDG-SVEIYSRNAERNTG 488
P+ MLA+ + +D E E+KYDG R Q+H +DG +V ++SRN E T
Sbjct: 227 PVKAMLAQ----AGTVTEALEDWETAAVEWKYDGARVQVH--DDGETVRLFSRNMEDVTD 280
Query: 489 KFPDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKV 545
P+VV AV + P+ +LD E+VA D + LPFQ + R R+ +V+ + V
Sbjct: 281 PLPEVVSAVEDAVDGPA----ILDGEVVAVDGDGDP-LPFQEVLRRFRRKHDVARASETV 335
Query: 546 DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDA 605
V ++AFD L+ +G+ LL L RR+ L D+ + + +T + D + I+ D
Sbjct: 336 GVRLHAFDCLHADGRDLLDAPLVDRRDAL-DAVLGDTDAVR-STFWLADDTERIEDIADE 393
Query: 606 AVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
A+ A EG+++K D D+TY P KR +W K K D ++LDLV A G G+R
Sbjct: 394 ALAAGHEGIMLK--DPDSTYSPGKRGKHWRKRKPDV-----ETLDLVVTGAQWGEGRRAT 446
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
G F L+ ++ + + + TG ++ L + L V + + +
Sbjct: 447 YLGTFELSA--RTDDGYAPVGNVATGITDEQLATLTELLEPHVTRETGQRVEIEPAVVFE 504
Query: 726 VWFEPTERPETSNSPASIVY 745
V +E +R T S ++ +
Sbjct: 505 VGYEEIQRSSTYESGYALRF 524
>gi|254656369|gb|ACT76279.1| ATP-dependent DNA ligase I, partial [Sebastiscus marmoratus]
Length = 136
Score = 169 bits (428), Expect = 5e-39, Method: Composition-based stats.
Identities = 76/136 (55%), Positives = 103/136 (75%)
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLI 615
Y NG+ L+++ L RR L +SF E G F FA ++ S + D I +FL+ +V SCEGL+
Sbjct: 1 YLNGESLVRQPLCRRRALLKESFSEAEGEFVFARSIDSDNTDSIAEFLEQSVRDSCEGLM 60
Query: 616 IKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY 675
++T+++DATYE +KRS NWLKLKKDY++ +GD++DL I A+ G+GKRTG YG FLLACY
Sbjct: 61 VRTLEKDATYEIAKRSHNWLKLKKDYLDGVGDTVDLCVIGAYLGKGKRTGTYGGFLLACY 120
Query: 676 DSNNEEFQSICKIGTG 691
D NEEFQS+CK+GTG
Sbjct: 121 DDENEEFQSVCKLGTG 136
>gi|296109481|ref|YP_003616430.1| DNA ligase I, ATP-dependent Dnl1 [methanocaldococcus infernus ME]
gi|295434295|gb|ADG13466.1| DNA ligase I, ATP-dependent Dnl1 [Methanocaldococcus infernus ME]
Length = 565
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 157/545 (28%), Positives = 256/545 (46%), Gaps = 74/545 (13%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
+F+ I N T R+ +L V + PEDL + Y+A ++ P ++ ELG+G+ +
Sbjct: 9 IFNKIENTTKRLDKRAYFIKLLEKVKD--PEDLKRICYIAIGRVFPEYDERELGVGEKLL 66
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVA-KASRSSQSMMRKPDPLTITKVFDTFRLIAK 317
I A+ + G + + ++ +E GD+GL A KA + PLT+ +VF+T R +A+
Sbjct: 67 INAII-SSGINKDKLYEKIKETGDIGLAAEKAKEEGKVKTLLFSPLTVKEVFETLRKVAE 125
Query: 318 EAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH 377
G+ SQ+KK I +L + A+ E +YL RL+ +RIG+ T+L AL ++Y
Sbjct: 126 TEGEGSQKKKMRLISSLFLRASPIERRYLARLILGDMRIGMNIPTVLEAL---SIY---- 178
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
P E+ KI + + EK++ L D N+ F PI PMLA
Sbjct: 179 ------FNVPKEKLEKIYAVTNDIGLLAEKLMKNELDDKELNIK---LFR---PIKPMLA 226
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ + E + + +F E KYDG R QIH D V+IYSR E T P++V +
Sbjct: 227 QLAPSIEEAIIEMGHPQF--ETKYDGARIQIHKKGD-KVKIYSRKLEDVTHALPEIVNEI 283
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVCIYAFDIL 555
+ K +++ E VA + + + PFQ + R R+ ++ + K+++ Y FD+L
Sbjct: 284 KKFK----HDLIVEGECVAIEEGRPR--PFQDILRRFRRKHDIGKAMKKINLRAYLFDLL 337
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGF--------------------FQFATTLTSID 595
Y++G+ + + + RR+ L EE G+ + L + D
Sbjct: 338 YKDGESYIDKPFKERRKAL----EELVGYENDWRKERERIERELKEDKKIDISYKLVTND 393
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
E ++F ++ EG++IK + +A Y P R K K ++LD+V
Sbjct: 394 PREAKEFYKWSLSIGHEGVMIKNL--NAPYTPGSRVRTMYKFKPTL-----ENLDVVITK 446
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE---AMLEER-----SSSLRSK 707
A G GKR YG+F + C + Q I +GTG +E ML+E L +
Sbjct: 447 AKRGMGKRKDWYGSFEI-CVKDKDGNLQPIGYVGTGLTEEDLQMLKEMIDKIVVKDLGDE 505
Query: 708 VIPKP 712
VI KP
Sbjct: 506 VIVKP 510
>gi|312136730|ref|YP_004004067.1| DNA ligase i, ATP-dependent dnl1 [Methanothermus fervidus DSM 2088]
gi|311224449|gb|ADP77305.1| DNA ligase I, ATP-dependent Dnl1 [Methanothermus fervidus DSM 2088]
Length = 554
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 138/528 (26%), Positives = 250/528 (47%), Gaps = 49/528 (9%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
+I L +++ + + T ++ D++ L E E L VV + + P ELG
Sbjct: 3 YIKLVELYEKLESTTKKLKKIDLLSKFLS---EVDKELLPAVVLMTLGTVFPGWSEKELG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-KASRSSQSMMRKPDPLTITKVFDT 311
+G ++KA++ G + + ++++ E GD+GL A K + + + PLT+ KV+
Sbjct: 60 VGFKLLVKAMSIVSGISANKIEEKIAEEGDVGLAAEKLFKKRRQVTFITQPLTVEKVYTN 119
Query: 312 FRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAA 371
+ +A G+ +Q +K N I +L A E +YL R++ +LR+G+ E + A+ +A
Sbjct: 120 LKKVADITGEGAQTRKINLITDILSLAKPKEAKYLTRMILEELRVGVGEGIMRDAIAKAF 179
Query: 372 VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIP 431
+ + + + + L AK+ + GV L S PG P
Sbjct: 180 KVDPKIVERAHMLTNDLGLVAKVACE-----------------KGVEGLKQ-LSLKPGRP 221
Query: 432 IGPMLAKPT----KGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNT 487
+ PMLA+ K + E+ F CE KYDG R QIH ++ + +++R E T
Sbjct: 222 VKPMLAQTAPSIKKAIEEMGKAF------CETKYDGIRVQIHR-KNSEIVVFTRRLENIT 274
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KV 545
PD+V AV K + F+++ EI+ + +PFQ L R R+ + ++
Sbjct: 275 NAVPDIVDAVE--KALPKKDFIVEGEIIGVKNGRP--IPFQYLLHRIRRKYEIEKAIKEI 330
Query: 546 DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFA--TTLTSIDLDEIQKFL 603
++ FD+LY PL+ E+ RR+ L + + G + + +T ++D+ +K
Sbjct: 331 PFTLFLFDVLYFE-NPLIDEKFENRRKILESITKTKEGKVELSRKVEVTCENIDDAEKLF 389
Query: 604 DAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
+++A EG++IK D +A Y P R LK K + ++LDLV I +G GKR
Sbjct: 390 KESIEAGHEGIMIK--DPNAPYIPGIRGKKMLKYKAE-----PETLDLVVIGGDYGEGKR 442
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
+ G++L+A D + E + + + TG + L+ + + ++ K
Sbjct: 443 AHLVGSYLVAARDEDTGELKPVAHVATGLDDDTLKNLTERMERIMVNK 490
>gi|304313941|ref|YP_003849088.1| ATP-dependent DNA ligase [Methanothermobacter marburgensis str.
Marburg]
gi|302587400|gb|ADL57775.1| ATP-dependent DNA ligase [Methanothermobacter marburgensis str.
Marburg]
Length = 551
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 144/528 (27%), Positives = 251/528 (47%), Gaps = 49/528 (9%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLEL 251
+I L+ V+ + + T R+ TDI+ + +V DL+PVV L ++ P EL
Sbjct: 3 YIELAEVYRKLESTTKRLEKTDILAELFSSV----ERDLLPVVTLLMLGRVFPIWSEEEL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVF 309
G+G +++A++ G + ++ +E GD+GL ++ S+ +Q+ PLT+ V+
Sbjct: 59 GVGIKLLMRAISTVVGVSVDEIEDAMREEGDIGLASEKLFSKKTQTTFFS-QPLTVEFVY 117
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
D R +A G+ +Q +K + +L A E +Y+ R + +LR+G+AE + A+ +
Sbjct: 118 DKLRSLAFVTGERAQSRKIGILVEVLSQAKPLEARYITRTVLEELRVGVAEGIIRDAISR 177
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV-YEKIVPALLTDGVWNLSNTCSFTP 428
A S P + +E A + + V V E+ P L + P
Sbjct: 178 A-------SGADPAL---VERAHMLTNDLGMVAAVAMEEGNPGL---------EKLNLEP 218
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
G P+ PMLA+ + + + CE KYDG R QIH D + I++R E T
Sbjct: 219 GRPVKPMLAQLAESIESAIEDLG--RAFCETKYDGIRVQIHRKGD-EISIFTRRLENITA 275
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVD 546
PD++ V R P ++++ EI+ + FQ + R R+ + + KV
Sbjct: 276 AVPDILEGVER-ALPD-EDYIVEGEIIVTIEGRPA--SFQYILQRVRRKYDIERLRRKVP 331
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI---DLDEIQKFL 603
+ ++ FD+LY +PL+ E LR RR L E PG + A+ + + ++DE
Sbjct: 332 LSLFLFDVLYYE-RPLIDEPLRERRRVLESIISEIPGEIE-ASRMVDVGPDNVDEALWLF 389
Query: 604 DAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
++ EG++IK D ++ Y P R LK K + ++LDL+ + +GRGKR
Sbjct: 390 RESIREGHEGIMIK--DTESPYIPGIRGKKMLKFKAE-----PETLDLIVVGGTYGRGKR 442
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
+ G++LLA D + E ++ + TG + L+E S + + I +
Sbjct: 443 AHLIGSYLLAARDDDTGELVTVAHVATGLDDETLQELSERMENLAIER 490
>gi|1706484|sp|P54875.1|DNLI_METTF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|1279773|gb|AAC44823.1| DNA ligase [Methanothermobacter thermautotrophicus]
Length = 557
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 251/520 (48%), Gaps = 47/520 (9%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGLEL 251
++ L+ V+ + + T R+ T+I+ +LR+V ++L+P V L ++ P EL
Sbjct: 6 YMELAEVYHRLESTTKRLEKTEILAELLRSV----DKELLPDVTILMLGRVFPIWSEEEL 61
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVF 309
G+G ++KA++ G + ++ + +E GD+GL ++ SR +Q+ PLT+ V+
Sbjct: 62 GVGIKLLMKAISLVVGVSMDEIEDEIREQGDIGLASEKLFSRKTQTTFFS-QPLTVEFVY 120
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
+ +A +G +Q KK N + +L A E +Y+ R + +LR+G+AE + A+ +
Sbjct: 121 SRLKALASASGDRAQSKKINILVEVLSQAKPLEARYITRTVLEELRVGVAEGIIRDAIAR 180
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + + + + L A + + E+ P L G NL PG
Sbjct: 181 AFEVDPALVERAHMLTNDLGMVAAVAR---------EEGEPGL---GRLNLE------PG 222
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
P+ PMLA+ + + + CE KYDG R QIH D V I++R E T
Sbjct: 223 RPVKPMLAQLASSIESAITELG--RAFCETKYDGIRVQIHRCGD-EVSIFTRRLENITAA 279
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDV 547
P+++ V + ++++ EI+ + FQ + R R+ + + +V +
Sbjct: 280 VPEILEGVE--EALPADDYIVEGEIIVT--MDGRPASFQYILQRVRRKYDVDRLTREVPL 335
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI---DLDEIQKFLD 604
++ FD+LY G PL+ E L RRE L E PG + A+ + + +LD+
Sbjct: 336 SLFLFDVLYHRG-PLIDEPLWHRREVLESILSEIPGRVE-ASRMVDVGPDNLDDALWLFK 393
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
++ EG++IK D +A Y P R LK K + ++LDL+ + +GRGKR
Sbjct: 394 ESIREGHEGIMIK--DTEAPYIPGIRGKKMLKFKAE-----PETLDLIVVGGTYGRGKRA 446
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ G++LLA D + E ++I + TG + L++ S +
Sbjct: 447 HLVGSYLLAVRDEKSGELKTIAHVATGLDDQTLQDLSERM 486
>gi|116754155|ref|YP_843273.1| DNA ligase I, ATP-dependent Dnl1 [Methanosaeta thermophila PT]
gi|121693344|sp|A0B7F9.1|DNLI_METTP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|116665606|gb|ABK14633.1| DNA ligase I, ATP-dependent Dnl1 [Methanosaeta thermophila PT]
Length = 552
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 149/542 (27%), Positives = 251/542 (46%), Gaps = 60/542 (11%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
IS +G + TDI+ + L + +DL V + P G ELG+G + + +++
Sbjct: 14 ISQTSGSLEKTDILASFLS---DLESDDLRIVAGFVMGVVIP---GTELGVGPSLLYESI 67
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP---------DPLTITKVFDTFR 313
+ A G + V + + GD GLVA R+ + RKP + L + V+ F
Sbjct: 68 SRATGLSSDAVNELLRATGDPGLVA--YRAVER--RKPLTLAAFSGSEGLEVQDVYQRFL 123
Query: 314 LIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY 373
IAK +G+ SQE + ++ + A+ E +Y+ RL +RIG+ E + A+ +A
Sbjct: 124 SIAKASGRGSQEIRVKNLQYMFSEASPLEAKYIARLAMEDMRIGVGEGLVRDAIAKAFGV 183
Query: 374 NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIG 433
+++ + N+ + L A+ Y K+ N + PI
Sbjct: 184 SKEDVERAYNLTNDLGLVAE-----------YAKL----------GRLNELGISINRPIK 222
Query: 434 PMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDV 493
MLA+ + + + E+K+DG R QIH + G+V I+SR E T P++
Sbjct: 223 MMLAQIGESIE---ASLAEGATAVEWKFDGARVQIHK-DKGNVRIFSRRLEDVTSSLPEI 278
Query: 494 VLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVCIYA 551
V R+ +LD E VA E + LPFQ + R R+ V+ + + + ++
Sbjct: 279 REIVR--GHVRARTAILDGEAVATG-EDGRPLPFQEILRRFRRKYGVARTAKTIPLKLHL 335
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASC 611
FDI+Y +G LL E L RR L + E A + + D+ +++ A+ A
Sbjct: 336 FDIIYMDGASLLDEPLEERRRVLVSVADPEI----IAEQVVTSDVHRVEEIYREALAAGH 391
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
EG+++K + +TY P KR NWLK+K + +SLDLV I A G GKR + G++
Sbjct: 392 EGVMLK--NPSSTYTPGKRGKNWLKIK-----PLLESLDLVVIGARWGEGKRANLLGSYR 444
Query: 672 LACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
LAC D++ E + + + TG ++ ML E + R ++ + I +V +E
Sbjct: 445 LACIDTDTGELKDVGWVATGITDEMLAELTELFRELIVKENGMEVEVHPEIVFEVGYEEI 504
Query: 732 ER 733
+R
Sbjct: 505 QR 506
>gi|170582204|ref|XP_001896024.1| DNA ligase III [Brugia malayi]
gi|158596852|gb|EDP35124.1| DNA ligase III, putative [Brugia malayi]
Length = 607
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 234/518 (45%), Gaps = 63/518 (12%)
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
+YL + P + + IIK + + + + Y + GD+ + S
Sbjct: 16 LYLLLKFLIPEADQRVYNLKAKQIIKIFSALFDWSFDELTESYNQTGDVSETICSFWSKL 75
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
RK +T V D +++ + Q+ + I L+ E +Y+IRL+ L
Sbjct: 76 GGDRKKSKITNQMVDDWLEKLSELTREKEQQMHFSEICKLVSCL---ELKYIIRLIMKDL 132
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
R+ + +L L + A Q+S+ N+Q +E+ K+ LL
Sbjct: 133 RVNAGAKHMLEGLKKGAYEMFQNSR---NLQGVIEKCQYADKE-------------KLLE 176
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
G+ IPI PMLA+P + + + + K + E E KYDGER Q+H +DG
Sbjct: 177 SGI---------VLNIPIKPMLAEPCRSIKQAMEKC-NKEMYAEIKYDGERLQLH--KDG 224
Query: 475 S-VEIYSRNAERNTGKFPDVVLAVSRLKK------PSVRSFVLDCEIVAYDREKQKILPF 527
S +SR+ + P + V L K P+ R ++D E++ D K LPF
Sbjct: 225 SKFMFFSRSLK------PTLDHKVVDLNKIISEAFPTSRDLIVDAEMLLIDTNTGKPLPF 278
Query: 528 QTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
TL +K VC++ FD +Y + L+++ LR RR+ L D+ +E P
Sbjct: 279 GTLGIHKKKQFK----DAAVCLFVFDCIYYDSNSLIEKSLRERRKFLEDNMKEIPNRILL 334
Query: 588 ATT--LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES- 644
++ + + D+++ + +D EGL++K D D+ YEP KR +WLK+KKDY++
Sbjct: 335 SSCHLIKKGENDKLEILISKTIDEGLEGLVLK--DLDSIYEPGKR--HWLKIKKDYLQGG 390
Query: 645 -IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSS 703
+ D+ DL+ + AF+G G + G FL+ YD ++F ++ K G G +A LE +
Sbjct: 391 DMADTADLILLGAFYGXGNKGGTMSVFLMGVYDKEKQKFCTVTKCGNGHDDATLERINKE 450
Query: 704 LRSKVIPKPRPYYRFADTIS------PD-VWFEPTERP 734
L K+ R Y + I PD + +P E P
Sbjct: 451 LEPKMNKISRKYENLPEWIECSRSLVPDFIVMDPKESP 488
>gi|261349657|ref|ZP_05975074.1| DNA ligase [Methanobrevibacter smithii DSM 2374]
gi|288861615|gb|EFC93913.1| DNA ligase [Methanobrevibacter smithii DSM 2374]
Length = 551
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 246/513 (47%), Gaps = 44/513 (8%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
V+ + N T R+ T I+ N L + TT E V L I PA E+GIG+ +
Sbjct: 9 VYSALENTTKRLEKTQIISNFLLKLDSTTLEQ---VGLLILGSIFPAWSDKEIGIGNKLV 65
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGL--VAKASRSSQSMMRKPDPLTITKVFDTFRLIA 316
++A+ EA G T V+ ++ GD+GL ++ ++ SQ+ PLTI VF + R ++
Sbjct: 66 MQAVGEAVGVTPDKVEDAVRDQGDIGLACISLYAKKSQTTFFS-QPLTIDFVFKSLRKLS 124
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
+++G S ++K + I +L A+ E +YL R + +LRIG+ E + A+ QA
Sbjct: 125 EKSGARSTKRKIDIILEMLSQASASEAKYLTRTILEELRIGVGEGVVRDAIAQAF----- 179
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
NI + E A ++ ++ V K G L + TPG P+ PML
Sbjct: 180 ------NIDKSVVERAMMLTNDLGLIAVVAK------EKGEGGLKE-LNLTPGTPVKPML 226
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
A+ + EI+N+ CE KYDG R Q+H D ++I++R E T P++V
Sbjct: 227 AQLAPPIPEIINEMGVA--ICETKYDGIRLQVHRHSD-EIKIFTRRLENITHALPEIVDL 283
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVCIYAFDI 554
+ ++++ E++A K L FQ + R R+ N+ + +V + ++ FD+
Sbjct: 284 FNEYLPHE--DYIVEGEVIA--TRDGKPLSFQNILHRVRRKHNIDEAMEQVPLKVFLFDL 339
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCE 612
LY P++ E L RR+ L + P + + T + E++ + ++ E
Sbjct: 340 LYYI-VPMIDEPLLKRRKKLEEIVNTTPDEINLSNMVYGTPDTIKEVEDLFELSIAQHHE 398
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
G++IK D Y P R LK K + ++LD+V + +G GKR G++L+
Sbjct: 399 GIMIK--DAGEPYIPGLRGKKMLKYKAE-----PETLDMVVVGGTYGIGKRGDFVGSYLV 451
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR 705
+ D +N +++ + TG +A LE + ++
Sbjct: 452 SLRDEDN-NLKTVAYVATGLDDATLEYLTKKMK 483
>gi|403366097|gb|EJY82840.1| DNA ligase [Oxytricha trifallax]
Length = 661
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 226/512 (44%), Gaps = 94/512 (18%)
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALL-VAATDCEPQYLIRLLQSKLRIGLA 359
+ LT+ V F + G+DS K + I LL + E ++++R L LRIG++
Sbjct: 63 NTLTLEDVVKVFVQLNDIKGEDSIIGKISEISELLNKCQNEIEIKFIVRSLDKGLRIGIS 122
Query: 360 ----EQTLLAALGQAAVYNEQHSKPPPNIQS-PLEEAAKIVKQVFSVLPVYEKIVPALLT 414
E LL L + + NE + I + + Q I +
Sbjct: 123 RPSVEACLLKLLNEGEINNEFVDEYENTIFGYKIYNNSSFGDQGLD-------INSEEIQ 175
Query: 415 DGVWNLSNTCSFTP-GIPIGPMLAKPTKGVSEIVN------KFQDMEFTCEYKYDGERAQ 467
D T P +P+ PML +P K E++ K QD EYKYDGER Q
Sbjct: 176 DSEIKPKQTGKLLPTNVPLKPMLGRPAKDFEEVLKLTSKFRKNQDDYLLAEYKYDGERTQ 235
Query: 468 IHYLEDGS-VEIYSRNAERNTGKFPDV-----VLAVSRLKKPSVRSFVLDCEIVAYDREK 521
IH+ DG V +YSRN + KF + + R + + +LD E+V D +
Sbjct: 236 IHF--DGEKVMMYSRNFDTQNQKFWRLNELLTTYFIERKRLGLIDRCILDGEVVYVDNKT 293
Query: 522 QKILPFQTL--STRARKNVSLSDIKVDV--------CIYAFDILYRNGQPLLQEQLRVRR 571
K LPFQ + + + + L+ I+VD C+ FD+L N + E + R+
Sbjct: 294 NKYLPFQNIERTLQMQSEDPLAQIEVDQLKEISTRPCVVLFDVLALNQNDCITENILKRK 353
Query: 572 EHLYDSFEEEPGFFQFAT-TLTSID------------------------LDE-------- 598
E L ++F +EP Q + S+D DE
Sbjct: 354 EILKETFSDEPDLLQLGKYHVLSLDDPLYDREEKNDIEPLKQKKKASKKQDEEVIVKKTM 413
Query: 599 -------------IQKFLDAAVDASCEGLIIKTMDRDATYEPS-KRSLNWLKLKKDYIES 644
+ + + +++ CEGLI K+ + + Y+ S KRS W+KLK ++
Sbjct: 414 LETYPHLLVVMLKVNELMIQSLNNDCEGLIFKSANDNTYYDISGKRSQQWVKLKHKLNDN 473
Query: 645 IGD---SLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEA---MLE 698
GD +LDL+PI A++G G+RTG +GA+L+ Y+ + F+++CK+GTGF ++ +L
Sbjct: 474 KGDMRDTLDLIPIGAYYGLGRRTGTFGAYLIGAYNREYKNFEAVCKLGTGFKDSDLKLLH 533
Query: 699 ERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
ER + L + P +R + TI PD W P
Sbjct: 534 ERVTPLLMEDKPTT---FRVSSTIKPDYWINP 562
>gi|76802375|ref|YP_327383.1| DNA ligase (ATP) [Natronomonas pharaonis DSM 2160]
gi|121729332|sp|Q3IPX0.1|DNLI_NATPD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|76558240|emb|CAI49828.1| DNA ligase (ATP) [Natronomonas pharaonis DSM 2160]
Length = 548
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 146/525 (27%), Positives = 244/525 (46%), Gaps = 57/525 (10%)
Query: 217 CNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHVK 274
+++ T+ +DL V ++ PAH+ +L IG + +ALA+A G ++
Sbjct: 23 VDLVATLCADAGDDLGTVARFVQGRVFPAHDSTKLDIGPSLCYEALAKAAGPNVDSDDIE 82
Query: 275 KQYQEMGDLGLVAKA-------SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKK 327
++ E+G++G VA++ ++ + LT++ V +T + +A AG S + K
Sbjct: 83 RRLAEVGEIGAVAESLDLGGQQGLAAFGGGTDREALTVSGVEETLQALAAAAGDGSTDAK 142
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP 387
++R+ L A E ++L RL+ ++R+G+ E T+ A+ A P P+++
Sbjct: 143 RDRLFDLFNRAEPTEARFLARLVLGEMRVGVGEGTVRDAIAAA------FEVPEPDVERA 196
Query: 388 LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIV 447
L+ A + DG L + G P+ MLA+ V E +
Sbjct: 197 LQVANDC-----------GLVAETARDDGAAGLDD-IGLVVGRPVKAMLAQAGTAV-EAL 243
Query: 448 NKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSR-LKKPSVR 506
+++ E KYDG R Q+HY D S ++SRN E T P+VV V + L P+
Sbjct: 244 DEWGTA--AVETKYDGARVQVHYDGD-SARLFSRNLEEVTEPLPEVVEFVEQSLSVPA-- 298
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILYRNGQPLLQ 564
+LD E+VA D + PFQ + R R+ ++ + DV + YAFD L+ +G+ LL
Sbjct: 299 --ILDGEVVAVDDDGTP-RPFQEILRRFRRKHDVAAAREDVSVELYAFDCLHVDGEDLLD 355
Query: 565 EQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDAT 624
L R + L + +A D DE+ A+DA EG+++K D+T
Sbjct: 356 TPLSERHDRLESLLADGVSPLSYAD-----DADEVADIEADALDAGHEGIMLKNP--DST 408
Query: 625 YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQS 684
Y P R NWLK K D ++LDLV A G G+R + G F+++ ++ ++
Sbjct: 409 YTPGSRGKNWLKRKPDV-----ETLDLVVTGAEWGEGRRANLLGTFVVSA--RADDGYEP 461
Query: 685 ICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
+ K+ TG ++ LE L ++ P R I P V FE
Sbjct: 462 VGKVATGITDEELER----LHERLQPHVRTEDGTDVDIEPAVVFE 502
>gi|110668565|ref|YP_658376.1| DNA ligase (ATP) [Haloquadratum walsbyi DSM 16790]
gi|121689659|sp|Q18GX5.1|DNLI2_HALWD RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|109626312|emb|CAJ52770.1| DNA ligase (ATP) [Haloquadratum walsbyi DSM 16790]
Length = 618
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 164/592 (27%), Positives = 262/592 (44%), Gaps = 78/592 (13%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I E+ + IT +V +L T + L VV + PA L IG A + +
Sbjct: 13 IEAESADLEITSLVSKLLTTAGNMDDKTLSTVVRFIKGTVFPAWSSQTLDIGPALLHTTI 72
Query: 263 AEACGRT--ESHVKKQYQEMGDLGLVAKA-SRSSQSMMRK-----PDPLTITKVFDTFRL 314
A+A G + V+ + E G++G VA + + Q + PD LT+ V T R
Sbjct: 73 AQAAGPNVDSADVENRLAEYGEIGAVAASYDLNGQQGLSAFTPSTPDSLTVGHVDKTLRA 132
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL------- 367
+A +G S+ +++N + L A+ E + L RL+ ++RIG+ T+ A+
Sbjct: 133 VASASGDGSESRRRNLLFGLFSQASSSEARVLARLILGEMRIGVGTGTVRDAIISGFIEP 192
Query: 368 ---------------------GQAAVYNE-------------QHSKPPPNIQSPLEEAAK 393
Q + N+ Q K P+ S ++ +A
Sbjct: 193 AADADKKTLESREDAKSVPPASQPEITNKISGDTSPNTSESVQTKKSDPDTSSNVDPSA- 251
Query: 394 IVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDM 453
+V++ V Y + G L + S G PI MLA+ GV + V+ +
Sbjct: 252 VVERALQVSNDYGMVATIARNQGQAGLID-ISLELGRPIQAMLAQAADGV-DAVDTWD-- 307
Query: 454 EFTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDC 512
E K+DG R QIH DG SV +YSRN E T P++V +S +K +V + +LD
Sbjct: 308 AVAIETKFDGARVQIHT--DGESVSLYSRNMEDVTDPLPEIVEFIS--QKVTVPA-ILDA 362
Query: 513 EIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDILYRNGQPLLQEQLRVR 570
E+VA + L FQ + R R+ + ++ V++ +Y FD L+ + LL LR R
Sbjct: 363 EVVAVSDDGDP-LAFQEVLRRFRRKYDIDAMRESVNLNVYVFDCLHIDDADLLDIPLRER 421
Query: 571 REHLYDSFEEEPGF--FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPS 628
RE L + F FQ T D + I + A+ EG+++K D D+TY P
Sbjct: 422 REKLRELFNTTDALSPFQLTT-----DPNVIAQARSKALSNGHEGVMLK--DPDSTYNPG 474
Query: 629 KRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNE-EFQSICK 687
R +WLK K D ++LDLV A G G+R V+G F+++ + +E +F S+ K
Sbjct: 475 SRGQHWLKHKPDV-----ETLDLVVTGAEWGEGRRANVFGTFVVSARTTADEQQFNSLGK 529
Query: 688 IGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNS 739
+ TG ++ L + LR V + I +V +E +R T +S
Sbjct: 530 VATGLTDDQLTTLTEQLRPHVRSEDGQTVMIEPAIVVEVGYEEIQRSPTYDS 581
>gi|124485445|ref|YP_001030061.1| hypothetical protein Mlab_0620 [Methanocorpusculum labreanum Z]
gi|224487889|sp|A2SR38.1|DNLI_METLZ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|124362986|gb|ABN06794.1| DNA ligase I, ATP-dependent Dnl1 [Methanocorpusculum labreanum Z]
Length = 546
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 247/543 (45%), Gaps = 53/543 (9%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+ F+ + + + I + R+ DI+ + T E+L V ++ P +
Sbjct: 1 MQFVEFAEICNTIEGTSSRLATADILAEKFPLL---TEEELPVFVRFMRGRLFPDWSSEK 57
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKV 308
LG G + ALA G+ S+V GD+G V ++ + Q+M + L + V
Sbjct: 58 LGFGPNLLYDALAYVIGKKRSYVVSAINNAGDIGKVVESLIEKREQTMFF-SEELDLLDV 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
F +AK +G+ SQ+++ + LL AT E +YL RL+ ++RIG+ E + A+
Sbjct: 117 NARFLQMAKSSGRRSQQERLRSAQYLLSNATPLEGRYLARLMLEEMRIGVGEGVVKDAVS 176
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
+A P +I +A + +V K P+ L++ T
Sbjct: 177 KAF-------GVPSDIVEHAHQALNDLGEV----AFLAKTDPSRLSN--------VHITA 217
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
P+ MLA+ ++ +V + E KYDG R Q H G IYSR E T
Sbjct: 218 FRPVKMMLAQQGS-ITSMVETHGTL--AAENKYDGSRFQFHK-SGGKCAIYSRRLEEMTA 273
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVC 548
PDVV L K + ++D E++A K +PFQT+ R R+ + D + +
Sbjct: 274 SLPDVV---KMLDKATDHDVIIDGEVIAI--MNGKPMPFQTILRRIRRKHDVGDAQEAIT 328
Query: 549 I--YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
+ + FDIL +G+ L+ R RR+ L E A L S +EI+ + ++
Sbjct: 329 LLPWVFDILAADGETLIDLPFRERRKIL-----ESVMNAYVAPQLVSDSAEEIEAYYHSS 383
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
+D EG+++K +D + Y P R W+K+K + D++DLV AA G GKR +
Sbjct: 384 LDNGNEGIMLKVLD--SPYLPGNRGKLWIKIKPEV-----DTIDLVVTAAEWGEGKRAKM 436
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
+G+FLLAC D N + + I ++ TG ++ML + K+I + F PDV
Sbjct: 437 FGSFLLACQDENGDLLE-ISRVATGIDDSMLSTLYDLFKDKIIAEKGKTVTF----EPDV 491
Query: 727 WFE 729
FE
Sbjct: 492 VFE 494
>gi|403346657|gb|EJY72732.1| DNA ligase [Oxytricha trifallax]
Length = 661
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 145/518 (27%), Positives = 230/518 (44%), Gaps = 106/518 (20%)
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALL-VAATDCEPQYLIRLLQSKLRIGLA 359
+ LT+ V F + G+DS K + I LL + E ++++R L LRIG++
Sbjct: 63 NTLTLEDVVKVFVQLNDIKGEDSIIGKISEISELLNKCQNEIEIKFIVRSLDKGLRIGIS 122
Query: 360 ----EQTLLAALGQAAVYNEQHSKPPPNI--------QSPLEEAAKIVKQVFSVLPVYEK 407
E LL L + + NE + I S ++ + + K
Sbjct: 123 RPSVEACLLKLLNEGEINNEFVDEYENTIFGYKIYNNSSFGDQGLNENSEESQESEIKPK 182
Query: 408 IVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVN------KFQDMEFTCEYKY 461
LL V P+ PML +P K E++ K Q+ EYKY
Sbjct: 183 QTGKLLPTNV-------------PLKPMLGRPAKDFEEVLKLTSKFRKNQNDYLLAEYKY 229
Query: 462 DGERAQIHYLEDGS-VEIYSRNAERNTGKFPDV-----VLAVSRLKKPSVRSFVLDCEIV 515
DGER QIH+ DG V +YSRN + KF + + R K+ + +LD E+V
Sbjct: 230 DGERTQIHF--DGEKVMMYSRNFDTQNQKFWRLNELLTTYFLERKKQGKIDRCILDGEVV 287
Query: 516 AYDREKQKILPFQTL--STRARKNVSLSDIKVDV--------CIYAFDILYRNGQPLLQE 565
D + K +PFQ + + + + L+ I+VD C+ FD+L N + + E
Sbjct: 288 YIDNKTNKYMPFQNIERTLQMKSEDPLAQIEVDQLQEISTRPCVVLFDVLALNKKDCITE 347
Query: 566 QLRVRREHLYDSFEEEPGFFQFAT-TLTSIDL-------------------------DEI 599
+ R+E L ++F +EP Q + S+D DE+
Sbjct: 348 NILKRKEILKETFSDEPNLLQLGQYHVLSLDDPLFDREEKKDIEPSKQKKKASKKQDDEV 407
Query: 600 ---QKFLDA-----------------AVDASCEGLIIKTMDRDATYEPS-KRSLNWLKLK 638
Q L+A +++ CEGLI K+ + + Y+ S KRS W+KLK
Sbjct: 408 VIKQTILEANPHLLVVMLKVNELMLQSLNDDCEGLIFKSANDNTYYDISGKRSQQWVKLK 467
Query: 639 KDYIESIG---DSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEA 695
++ G D+LDL+PI A++G G+RTG +GA+L+ Y+ + F+++CK+GTGF ++
Sbjct: 468 HKLNDNKGEMRDTLDLIPIGAYYGLGRRTGTFGAYLIGAYNREYKNFEAVCKLGTGFKDS 527
Query: 696 ---MLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
+L ER + L + P +R + TI PD W P
Sbjct: 528 DLKLLHERVTPLLMEDKPTT---FRVSSTIKPDYWINP 562
>gi|147918976|ref|YP_687298.1| ATP-dependent DNA ligase [Methanocella arvoryzae MRE50]
gi|121682804|sp|Q0W0X1.1|DNLI_UNCMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|110622694|emb|CAJ37972.1| ATP-dependent DNA ligase [Methanocella arvoryzae MRE50]
Length = 568
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 141/496 (28%), Positives = 236/496 (47%), Gaps = 41/496 (8%)
Query: 219 MLRTVMETTPEDLVPV-VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQY 277
M+ ++ P D +PV V +I P + ++GI S+IK ++ E V + Y
Sbjct: 25 MIAAFLQQAPVDELPVIVTFLTGRIFPEWDQRKIGIASQSMIKIISTITHNPEDAVVESY 84
Query: 278 QEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALL 335
++ G LG+ A+ + Q +P+ +T+ +V +TF IA+ +G S KK+ + LL
Sbjct: 85 KKTGHLGVTAEEMFQKRRQVTFFEPEDITVKEVAETFYEIARSSGAGSSAKKQKILIGLL 144
Query: 336 VAATD-CEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKI 394
AT E Y++ L + G E + A+GQA + + S L E A+I
Sbjct: 145 HRATTPKEAHYIVSLTIEYVLSGAKEGVMEDAIGQAFGATLDQVRRAHMLTSDLGETARI 204
Query: 395 VKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDM- 453
K T+G L + P P+ PMLA+ + E ++ +
Sbjct: 205 AK-----------------TEGAAGL-EAITIRPMRPVRPMLAQNVSSIREALDTMGGVA 246
Query: 454 EFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRS--FVLD 511
EF E KYDG R QIH + V++YSR E T P++V V + SV+S +LD
Sbjct: 247 EF--EMKYDGARLQIHKV-GKDVKLYSRRLEDLTDALPEIVGYV----RESVKSDTAILD 299
Query: 512 CEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
E +A D++ + +PFQ + TR R+ V + + + + FD+L+ GQ + LR
Sbjct: 300 SECIAIDKDTGRPIPFQNILTRLRRIHKVEETQKQFPLILRPFDVLFNQGQSTIDLPLRE 359
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSK 629
RR+ L + Q A L + ++ Q+ + +V + EGL+ K D +ATY P
Sbjct: 360 RRKILEEIVIATDSVIQPARALVTDQEEKAQELFEESVKSGNEGLMGK--DLNATYTPGV 417
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
R +K+K S+ D+LDL ++A G G++ G +F +A D ++ + ++
Sbjct: 418 RGKKMVKIK-----SVLDTLDLAIVSAEWGHGRKAGWLTSFEVAALDEETGDYVILGRVA 472
Query: 690 TGFSEAMLEERSSSLR 705
+GFS+ L E + L+
Sbjct: 473 SGFSDEQLIEMTEKLK 488
>gi|282163283|ref|YP_003355668.1| DNA ligase [Methanocella paludicola SANAE]
gi|282155597|dbj|BAI60685.1| DNA ligase [Methanocella paludicola SANAE]
Length = 574
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 256/542 (47%), Gaps = 42/542 (7%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV-VYLAANKIAPAHEGLEL 251
F L VF+ + + R+ T I+ + ++ V P D +PV V ++ P + ++
Sbjct: 3 FSALVDVFEKLRKTSSRLEKTAIIADFIKGV----PADDLPVIVAFLTGRVFPLWDERKI 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVF 309
GI ++IK ++ E+ V + Y+ G LG+ A+ + Q+M + D +T+ V+
Sbjct: 59 GIASQTVIKIISTITYNPENKVVESYKNTGHLGVTAEEMFQKRKQTMFFEADEITVRNVY 118
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
DTF IA+ G S KK+ + LL AT E +Y++ L + G E + A+ +
Sbjct: 119 DTFVEIARLTGAGSATKKQKVLIGLLHRATPKEAEYIVSLAMEYVLSGAKEGVMEEAIAR 178
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + + + S L E A++ A+LT G L + P
Sbjct: 179 AFGVPVELVRRSNMLISDLGETARV----------------AMLT-GEAGL-QAINIRPM 220
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
P+ PMLA+ + E ++ E KYDG R Q+H L D V +YSR E T
Sbjct: 221 RPVRPMLAQNVASIQEALDAMGG-RADFETKYDGARLQVHKLGD-EVRLYSRRLENLTDA 278
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDV 547
P++V V + K S +LD E +A D + + +PFQ + TR R+ ++ + K +
Sbjct: 279 LPEIVDYVRQSVKAD--SAILDSECIATDPKTGRPVPFQNILTRLRRIYNVEEKKKLFPL 336
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
+ FDILY +G+ + + RR+ L + + A L + D+ Q ++
Sbjct: 337 FLRPFDILYLDGESEIDKPFIERRQILETTILPLDETCKPAMALITDDVKAAQDLFKESL 396
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
+ EGL+ K D +ATY P R +K+K+ + D+LDL +++ G G++ G
Sbjct: 397 KSGNEGLMAK--DLNATYTPGVRGKKMVKIKE-----VLDTLDLAIVSSEWGHGRKAGWL 449
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVW 727
+F +A D N +++ + ++ +GFS+ L+E + L+ + + + R D + PDV
Sbjct: 450 TSFEVAALDENTDQYVVLGRVASGFSDEQLQEMTERLKPLITAE---HGRIVD-VKPDVI 505
Query: 728 FE 729
E
Sbjct: 506 VE 507
>gi|15679575|ref|NP_276692.1| DNA ligase [Methanothermobacter thermautotrophicus str. Delta H]
gi|2494167|sp|Q50566.1|DNLI_METTH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|1272332|gb|AAC44812.1| putative DNA ligase [Methanothermobacter thermautotrophicus]
gi|2622703|gb|AAB86053.1| DNA ligase [Methanothermobacter thermautotrophicus str. Delta H]
Length = 561
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 138/527 (26%), Positives = 255/527 (48%), Gaps = 47/527 (8%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGLEL 251
++ L+ V+ + + T R+ T+I+ +LR+V ++L+P V L ++ P EL
Sbjct: 6 YMELAEVYHRLESTTKRLEKTEILAELLRSV----DKELLPDVTILMLGRVFPIWSEEEL 61
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVF 309
G+G ++KA++ G + ++ + +E GD+GL ++ SR +Q+ PLT+ V+
Sbjct: 62 GVGIKLLMKAISLVVGVSMDEIEDEIREQGDIGLASEKLFSRKTQTTFFS-QPLTVEFVY 120
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
+ +A +G +Q KK N + +L A E +Y+ R + +LR+G+AE + A+ +
Sbjct: 121 SRLKALASASGDRAQSKKINILVEVLSQAKPLEARYITRTVLEELRVGVAEGIIRDAIAR 180
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + + + + L A + + E+ P L G NL PG
Sbjct: 181 AFEVDPALVERAHMLTNDLGMVAAVAR---------EEGEPGL---GRLNLE------PG 222
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
P+ PMLA+ + + + CE KYDG R QIH D + I++R E T
Sbjct: 223 RPVKPMLAQLASSIESAITELG--RAFCETKYDGIRVQIHRCGD-EISIFTRRLENITAA 279
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDV 547
P+++ V + ++++ EI+ + FQ + R R+ + + +V +
Sbjct: 280 VPEILEGVE--EALPADDYIVEGEIIVTMDGRPA--SFQYILQRVRRKYDVERLTREVPL 335
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI---DLDEIQKFLD 604
++ FD+LY +PL+ E LR RRE L E PG + A+ + + +L++ +
Sbjct: 336 SLFLFDVLYHR-EPLIDEPLRHRREVLESILSEIPGRVE-ASRMVDVGPDNLNDALWLFE 393
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
++ EG++IK D +A Y P R LK K + ++LDL+ + +GRGKR
Sbjct: 394 ESIREGHEGIMIK--DTEAPYIPGIRGKKMLKFKAE-----PETLDLIVVGGTYGRGKRA 446
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
+ G++LLA D ++ + ++ + TG + L++ S + I +
Sbjct: 447 HLVGSYLLAARDEDSGDLVTVAHVATGLDDETLQQLSERMEKLAIER 493
>gi|148642705|ref|YP_001273218.1| ATP-dependent DNA ligase, Cdc9 [Methanobrevibacter smithii ATCC
35061]
gi|222445799|ref|ZP_03608314.1| hypothetical protein METSMIALI_01442 [Methanobrevibacter smithii
DSM 2375]
gi|166215374|sp|A5UKX2.1|DNLI_METS3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|148551722|gb|ABQ86850.1| ATP-dependent DNA ligase, Cdc9 [Methanobrevibacter smithii ATCC
35061]
gi|222435364|gb|EEE42529.1| ATP-dependent DNA ligase domain protein [Methanobrevibacter smithii
DSM 2375]
Length = 551
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 247/513 (48%), Gaps = 44/513 (8%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
V+ + N T R+ T I+ N L + TT E V L I PA E+GIG+ +
Sbjct: 9 VYSALENTTKRLEKTQIISNFLLKLDSTTLEQ---VGLLILGSIFPAWSDKEIGIGNKLV 65
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGL--VAKASRSSQSMMRKPDPLTITKVFDTFRLIA 316
++A+ EA G T V+ ++ GD+GL ++ ++ SQ+ PLTI VF + R ++
Sbjct: 66 MQAVGEAVGVTPDKVEDAVRDQGDIGLACISLYAKKSQTTFFS-QPLTIDFVFKSLRKLS 124
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
+++G S ++K + I +L A+ E +YL R + +LRIG+ E + A+ QA
Sbjct: 125 EKSGARSTKRKIDIILEMLSQASASEAKYLTRTILEELRIGVGEGVVRDAIAQAF----- 179
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
NI + E A ++ ++ V K G L + TPG P+ PML
Sbjct: 180 ------NIDKSVVERAMMLTNDLGLIAVVAK------EKGEGGLKE-LNLTPGTPVKPML 226
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
A+ + EI+N+ CE KYDG R Q+H D ++I++R E T P++V
Sbjct: 227 AQLAPPIPEIINEMGVA--ICETKYDGIRLQVHRHSD-EIKIFTRRLENITHALPEIVDL 283
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVCIYAFDI 554
+ ++++ E++A R+ L FQ + R R+ N+ + +V + ++ FD+
Sbjct: 284 FNEYLPHE--DYIVEGEVIA-TRDGNP-LSFQNILHRVRRKHNIDEAMEQVPLKVFLFDL 339
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL--TSIDLDEIQKFLDAAVDASCE 612
LY P++ E L RR+ L + P + + T + E++ + ++ E
Sbjct: 340 LYYI-VPMIDEPLLKRRKKLEEIVNTTPDEINLSNMVYGTPDTIKEVEDLFELSIAQHHE 398
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
G++IK D Y P R LK K + ++LD+V + +G GKR G++L+
Sbjct: 399 GIMIK--DAGEPYIPGLRGKKMLKYKAE-----PETLDMVVVGGTYGIGKRGDFVGSYLV 451
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR 705
+ D +N +++ + TG +A LE + ++
Sbjct: 452 SLRDEDN-NLKTVAYVATGLDDATLEYLTKKMK 483
>gi|154151695|ref|YP_001405313.1| ATP-dependent DNA ligase I [Methanoregula boonei 6A8]
gi|224487888|sp|A7IAA9.1|DNLI_METB6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|154000247|gb|ABS56670.1| DNA ligase I, ATP-dependent Dnl1 [Methanoregula boonei 6A8]
Length = 550
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 152/536 (28%), Positives = 251/536 (46%), Gaps = 64/536 (11%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
+ + +GR+ + +++ R + + P++L V +I P +LGIG + +A+
Sbjct: 13 LEHLSGRLDMIEVIS---RALPDLAPDELPVFVRFVMGRIFPDWSAQKLGIGPNLLYEAV 69
Query: 263 AEACGRTESHVKKQYQEMGDLG-----LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAK 317
+A G V + + GD+G ++AK ++ S S L + V++ I+
Sbjct: 70 RQAAGVKLETVITRINQQGDVGRAVEDILAKKTQVSWSHQ----DLELVYVYNKLTGISS 125
Query: 318 EAGKDSQEKKKNRIKALLVA-ATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
G SQ K+K RI LL+ A+ E +YL R++ +LRIG+ E T+ A+ +A + +
Sbjct: 126 RGGVTSQ-KEKIRIAMLLLGDASPLEGRYLARIMLEELRIGVGEGTVREAIAKAFMVDSA 184
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
+ + L E A++ K+ P L+D TP P+ ML
Sbjct: 185 LVEHAMQAINDLGEVARLAKK-----------GPTALSD--------VHITPFHPVKMML 225
Query: 437 AKPTKGVSEIVNKFQDM-EFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVL 495
A+ I +D E EYKYDG R Q H E +YSR E + PDV
Sbjct: 226 AQQ----GTIAGMIEDHGEIAAEYKYDGSRFQFHK-EGAKARMYSRRLEDVSEALPDV-- 278
Query: 496 AVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFD 553
+ L K + +LD E++A ++ +PFQ++ R R+ +++ + + + FD
Sbjct: 279 -IDLLSKATSHDVILDGEVIAIKDDRP--MPFQSVLRRFRRRHDIAEAQEAIRMVPNVFD 335
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEG 613
ILY +G+ L+ RR+ L E G F A + S D I++ A+ A EG
Sbjct: 336 ILYLDGETLIDLPFFERRKKL----ETVVGKF-VAPQVVSTDPQTIEQTYHDALAAGHEG 390
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
+++K + Y P +R NW+K+K + D+LDL I A G GKR V+G+FL+A
Sbjct: 391 IMLKV--PASPYTPGQRGKNWIKIKPEV-----DTLDLAVIGAEWGEGKRAHVFGSFLVA 443
Query: 674 CYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
C D + + ++ TGFS+ L E L+ VI + RF P++ FE
Sbjct: 444 CQDQG--KLIPLSRVATGFSDEQLTEVYDLLKDAVISRTGKEVRF----EPELVFE 493
>gi|355570832|ref|ZP_09042102.1| DNA ligase [Methanolinea tarda NOBI-1]
gi|354826114|gb|EHF10330.1| DNA ligase [Methanolinea tarda NOBI-1]
Length = 566
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 151/533 (28%), Positives = 250/533 (46%), Gaps = 59/533 (11%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+ F+ + + + + GR+ +T + +L ++ E DL V +I P +
Sbjct: 6 MKFLEFARICEQLEGIGGRLEMTGKISAILPSLDEG---DLPVFVRFLTGRIFPDWSPNK 62
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA----SRSSQSMMRKP------ 300
+GIG + AL + T S + + GD+GL +A R+ + R P
Sbjct: 63 IGIGPNLLFDALTQVVDATRSDIIGEINRKGDVGLAVQAILENKRAGKRSGRSPTFQTSL 122
Query: 301 --DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGL 358
L ++ V+ I++ G+ SQ +K + ++ L A+ E +YL RL+ LRIG+
Sbjct: 123 FSQELDLSSVYSDLERISRLEGRSSQVEKLSLVQNLFQNASPLEAKYLARLILEDLRIGV 182
Query: 359 AEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
E T+ A+ QA S P S +E A + + + V K +L D
Sbjct: 183 GEGTMRDAIAQA------FSVDP----SLVEHAYQAINDLGEVALRARKGRDSL-ADVHI 231
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
L + P+ MLA+ +S+ + + M EYKYDG R Q H + +
Sbjct: 232 RLFH--------PVKMMLAQQGS-ISQAIAENGAM--AAEYKYDGSRFQFHK-QGNRCRM 279
Query: 479 YSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
YSR E T P+VV LK + +LD E++A + + LPFQT+ R R+
Sbjct: 280 YSRKLEDVTEALPEVV---ETLKNATSHDVILDGEVIAI--KDGRPLPFQTVLRRFRRKY 334
Query: 539 SLSDIKVDVCI--YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
++ ++ ++ + + FDIL+ +G+ L+ + LR RR++L + A S D+
Sbjct: 335 DIAAMQKEIRMQPFVFDILFLDGKTLIDDPLRERRKYLEAAMSG-----CVAPQTVSSDI 389
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAA 656
I+ ++DA EGL++K + ++Y P R NWLK+K DS+DL I A
Sbjct: 390 SVIEAVYRESLDAGHEGLMLKVLS--SSYTPGIRGKNWLKIKPGV-----DSIDLAVIGA 442
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
G GKR ++G+FLLAC D E + K+ TGF++ L+E L+ +VI
Sbjct: 443 EWGEGKRAHLFGSFLLACQDRG--ELLPVGKVATGFTDEELQEVYELLKDRVI 493
>gi|448468750|ref|ZP_21599944.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum kocurii JCM 14978]
gi|445810291|gb|EMA60320.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum kocurii JCM 14978]
Length = 604
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 253/550 (46%), Gaps = 64/550 (11%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPE---------DLVPVVYLAANKIAPAHEGLELGI 253
++ E G I T +V ++L E E +L V ++ PAH+ L +
Sbjct: 13 LAAEPGDIETTRLVADLL-AAAEGASETDDDSDDSDELATVARFLLGRVFPAHDTRTLDV 71
Query: 254 GDASIIKALAEACG--RTESHVKKQYQEMGDLGLVA-----KASRSSQSMMRKPDPLTIT 306
G A +A+A A G T + V+++ E G++G VA R + D LT+
Sbjct: 72 GPALCREAIARAAGPNVTAADVEERLAEEGEIGAVAAGFEFGGQRGLAAFGEGRDRLTVA 131
Query: 307 KVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAA 366
V R +A AG S+ +K++ + L E + L RL+ ++R+G+ E + A
Sbjct: 132 AVDAELRELAAAAGDGSESRKRDALFGLFNRCEAAEAKLLARLVLGEMRLGVGEGAVRDA 191
Query: 367 L----------GQAAVYNEQHSKPPPNIQSPL----EEAAKIVKQVFSVLPVYEKIVPAL 412
+ G+A E + P + P +EA +V++ V Y ++
Sbjct: 192 IAEAFLAADGDGEAGGDEECDATPDSDADGPTLRAGDEAVGVVERALQVTNDYGRVAVLA 251
Query: 413 LTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL- 471
+G+ L G P+ MLA+ ++ V F E E K+DG R Q+HY+
Sbjct: 252 RDEGLGGLRGE-ELEVGRPVQAMLAQAGS-ATDAVEAFG--EVAVETKFDGARVQVHYVP 307
Query: 472 EDGSVE-------IYSRNAERNTGKFPDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQK 523
E G E IYSRN + T P+V V +R+ P +LD E+VA D +
Sbjct: 308 ESGGEERDKLGPRIYSRNMDDVTDALPEVAEYVEARISDP----VILDAEVVAVD-DDGG 362
Query: 524 ILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILYRNGQPLLQEQLRVRREHLYDSFEEE 581
LPFQ + R R+ + ++ +V + +AFD L+ +G+ LL E LR R + L ++ +
Sbjct: 363 PLPFQEVLRRFRRKHDVDRMREEVGLRLHAFDCLHADGRDLLDEPLRARHDRLVEALPDA 422
Query: 582 PGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDY 641
+FA D I+ AA+DA EG+++K ++ Y P R +WLK K D
Sbjct: 423 AAGVEFAD-----DPAAIEAAEAAALDAGHEGVMLKNP--ESAYTPGDRGRDWLKRKPDV 475
Query: 642 IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERS 701
++LD V + A G G+R ++G FLLA + + EF +I K+ TG ++ L + +
Sbjct: 476 -----ETLDAVVVGAEWGEGRRAELFGTFLLAVR-AGDGEFATIGKVATGLTDEALADLT 529
Query: 702 SSLRSKVIPK 711
L V+ +
Sbjct: 530 ERLEPHVVSE 539
>gi|448323407|ref|ZP_21512869.1| DNA ligase (ATP) [Natronococcus amylolyticus DSM 10524]
gi|445599899|gb|ELY53921.1| DNA ligase (ATP) [Natronococcus amylolyticus DSM 10524]
Length = 563
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 242/502 (48%), Gaps = 40/502 (7%)
Query: 213 TDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESH 272
T IV ++L E L+P L K+ PA+EG +LGI + ++A+ +A G ES
Sbjct: 23 TAIVASVLEAATTDELERLLP---LFRGKVTPAYEGADLGISSSLTLEAIRKATGVAESE 79
Query: 273 VKKQYQEMGDLGLVAK---ASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKN 329
++ + E GDLG A A+++ Q++ LT+ VF+T R + + G+ SQ+++ +
Sbjct: 80 IRTTWHETGDLGTAAAEAVANQTQQTLFST--DLTVESVFETLRDLLEYEGEGSQQRRID 137
Query: 330 RIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLE 389
+ LL A E +Y++R + LRIG+ E T+ A+ QAA+ +
Sbjct: 138 AVAKLLSNAEPEEARYVVRTVLGHLRIGIGEGTIRDAIAQAALDGS-------------D 184
Query: 390 EAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
EA V+ + + Y + GV L + P+ MLA V + ++
Sbjct: 185 EATDAVEYAYQLTNDYPLVARTARESGVNGLRD-LEIELFRPLQVMLADSADSVEDGIDA 243
Query: 450 F--QDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVR 506
D EYKYDG R QIH +DG V ++R E T +FPDVV +V + +
Sbjct: 244 VATSDGPLLAEYKYDGVRVQIH--KDGDEVRAFTRRLEEITEQFPDVVESVR--TRVAAD 299
Query: 507 SFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVCIYAFDILYRNGQPLLQ 564
S VL+ EIV YD + + PFQ LSTR + ++ + + V +Y FD+L G+ LL+
Sbjct: 300 SCVLEGEIVGYDPDTGALTPFQELSTRITREHDIEAAAEETPVVVYLFDLLSLEGESLLE 359
Query: 565 EQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD-EIQKFLDA-AVDASCEGLIIKTMDRD 622
E L R L E E + + D E+ + L A A+ A EGL+ K + +
Sbjct: 360 ESLDERLARLDSVLEPEEWAIEPTQHVRFDPADPELARELYADALAAGHEGLMCKNL--E 417
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
Y+P +R LK+K + LD+V + G+R G G LAC D+ ++E
Sbjct: 418 VPYQPGRRVGYMLKVKPTM-----EPLDVVVTRGKYSEGRRKGKLGRLYLACRDTEHDEL 472
Query: 683 QSICKIGTGFSEAMLEERSSSL 704
+ ++ TG+++ L + +L
Sbjct: 473 NEVGRLATGYTDEQLAALTDAL 494
>gi|76154970|gb|AAX26356.2| SJCHGC03478 protein [Schistosoma japonicum]
Length = 203
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 94/135 (69%)
Query: 609 ASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
+CEGL+IKT+D ++TYE +KRS +WLKLKKDY+E +GD+LDLV I FHG GKR G YG
Sbjct: 1 GNCEGLMIKTLDHNSTYEIAKRSHSWLKLKKDYLEGVGDTLDLVVIGGFHGTGKRAGRYG 60
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
+LLACYD EE+Q+ICKIGTG + L S +S + K +PYY++ ++ PD WF
Sbjct: 61 GYLLACYDPETEEYQTICKIGTGMKDDDLASFSEYFKSHAVDKAKPYYQYTSSLIPDQWF 120
Query: 729 EPTERPETSNSPASI 743
EP + E + SI
Sbjct: 121 EPVQVWEVKAADLSI 135
>gi|448500789|ref|ZP_21611951.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum coriense DSM 10284]
gi|445696028|gb|ELZ48123.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum coriense DSM 10284]
Length = 632
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 155/584 (26%), Positives = 262/584 (44%), Gaps = 66/584 (11%)
Query: 210 ILITDIVCNMLRTVMETTPEDLVPVVYLAA-NKIAPAHEGLELGIGDASIIKALAEACGR 268
+ + D++ + E P+D +PVV + ++ PAH+ L +G A +A+A A G
Sbjct: 24 LAVADLLADAGGGAGEHGPDDDLPVVVRSLLGRVFPAHDTRTLDVGPALCREAVARAAGP 83
Query: 269 T--ESHVKKQYQEMGDLGLVAKA-----SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGK 321
V+ + E G++G VA A R + D LT+ V R +A E+G
Sbjct: 84 NVDADDVEDRLAERGEIGAVAAAYDFGGQRGLAAFGSGRDALTVAAVDGALRDLAAESGD 143
Query: 322 DSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV-----YNEQ 376
S+ +K++ + L + E +L RL+ ++R+G+ E T+ A+ +A + E
Sbjct: 144 GSESRKRDALFGLFTRCSPSEAAFLARLVLGEMRLGVGEGTVRDAVAEAFLAPGDDAGEA 203
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
P + +P ++A V++ V Y ++ +G L S G P+ ML
Sbjct: 204 AESDGPELTAP-DDAVAAVERALQVTNDYGRVAVRARDEGSEGL-RAESLRVGRPVQAML 261
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV-------------------- 476
A+ ++ V+ F E E K+DG R Q+H+ DG
Sbjct: 262 AQAGT-ATDAVDAFG--EVAVETKFDGARVQVHHAPDGGDAEGDAPGGDASDGEEAALGP 318
Query: 477 EIYSRNAERNTGKFPDVVLAVS-RLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
+YSRN + T P++V V+ R+ P +LD E+VA D + LPFQ + R R
Sbjct: 319 RLYSRNMDDVTEALPEIVEYVADRVDAP----VILDGEVVAVDDDGDP-LPFQEVLRRFR 373
Query: 536 KNVSLSDIK--VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
+ + ++ V + ++AFD L+ +G LL E LR R E L + + A +
Sbjct: 374 RKHDVDRMRETVSLRLHAFDCLHADGDDLLDEPLRERHERLREVLPDAAATLALADGPDA 433
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVP 653
I +E AA+DA EG+++K ++ Y P R +WLK K D ++LD V
Sbjct: 434 IAAEER-----AALDAGHEGVMLKNP--ESAYTPGDRGRDWLKRKPDV-----ETLDAVV 481
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR 713
+ A G G+R ++G FLLA D + + S+A +RS++ R P P
Sbjct: 482 VGAEWGEGRRAELFGTFLLAVRDEDEATPPTARSDAVDRSDAA--DRSTAGRDADDPAPP 539
Query: 714 PYY---RFADTISPDVWFEPTERPE---TSNSPASIVYDSQITC 751
Y + A I+ + + TER E + ++ +D ++
Sbjct: 540 GYATVGKVATGITDEALADLTERLEPIVVDETGTAVAFDPELVV 583
>gi|406907770|gb|EKD48493.1| hypothetical protein ACD_64C00280G0001 [uncultured bacterium]
Length = 465
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 204/423 (48%), Gaps = 30/423 (7%)
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+ K G SQE+K ++ LL +Y++R++ KLR+G ++ T++ AL V +
Sbjct: 3 LEKIEGTGSQEEKAGKLFELLAQLDPISAKYVVRIVLGKLRLGFSDMTVIDALSWMEVGD 62
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
+ ++++ +E A I V ++ L +G T GIPI P
Sbjct: 63 K-------SLRAKIEHAYNI--------SVDSGLIAKTLKEGGIKAIEQMHITIGIPIRP 107
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG---SVEIYSRNAERNTGKFP 491
A+ +IV+K + + K DG R QIH + G + +SRN + + FP
Sbjct: 108 AAAERLPTAKDIVDKLG--KCVAQPKLDGFRLQIHLDKTGPRPKIRFFSRNLKDMSDMFP 165
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN-VSLSDIKVDVCIY 550
D+V + + V++ + + E + YD LPFQ R RK+ + + + + ++
Sbjct: 166 DLVAPIEAV---DVQTLICEGEAIGYDANTDTFLPFQETVKRKRKHGIEQAATEFPLKLF 222
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSF--EEEPGFFQFATTLTSIDLDEIQKFLDAAVD 608
FD+LY NG+PLL + +R HL ++ QF +++++ ++
Sbjct: 223 LFDLLYLNGEPLL-DMPHEQRYHLLKKLVKHDQNNPLQFIAEKEITTAKQLEEYFYEMIE 281
Query: 609 ASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR-TGVY 667
EG+++K M+ A Y+P KR+ NW+KLK+ + D++D + ++G GKR T
Sbjct: 282 EGLEGVVVKRMN--AIYQPGKRNFNWIKLKRQEEGELEDTIDCAILGYYYGAGKRATFGI 339
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVW 727
GAFL+ ++ ++ F+++ K+GTG S+ +E + L + + A + PDVW
Sbjct: 340 GAFLVGVFNKGHDRFETVAKVGTGLSDVAWKELRTKLDAAAVTHKPVNVECAKELYPDVW 399
Query: 728 FEP 730
P
Sbjct: 400 TAP 402
>gi|448624644|ref|ZP_21670592.1| DNA ligase, ATP dependent [Haloferax denitrificans ATCC 35960]
gi|445749849|gb|EMA01291.1| DNA ligase, ATP dependent [Haloferax denitrificans ATCC 35960]
Length = 585
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 152/537 (28%), Positives = 244/537 (45%), Gaps = 44/537 (8%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHV 273
V ++L + +DL V ++ PA + L IG +A+A A G + V
Sbjct: 22 VVSLLSDLFRDAGDDLPTVARFVQGRVFPAWDSTTLDIGPRLCHEAIARAAGPNVSADDV 81
Query: 274 KKQYQEMGDLGLVAKA-SRSSQSMMRK-----PDPLTITKVFDTFRLIAKEAGKDSQEKK 327
+ + + G++G VA + Q + D LT+ +V R +A +G S+E K
Sbjct: 82 EDRLADRGEIGAVAASYDFGGQRGLAAFGSGGQDGLTVAEVDSELRALAAASGSGSEETK 141
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA----------AVYNEQH 377
+ L E ++L RL+ S++RIG+ E T+ A+ +A ++
Sbjct: 142 LKTLYGLFNRTDPDEARFLARLVLSEMRIGVGEGTVRDAVAEAFLVDPADAAAIRDDDAD 201
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
S+ ++ EA V + V Y + +G L + G P+ MLA
Sbjct: 202 SETEDAARTSRNEAIAAVARALQVSNDYGMVAELARDEGEAGL-DGVRLEVGRPVQAMLA 260
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ ++ +++++ E K+DG R Q+H DG V ++SRN E TG P+VV V
Sbjct: 261 QAGT-AADALDEWETA--AVETKFDGARVQVHRDVDGEVSLFSRNMEDVTGALPEVVEFV 317
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDIL 555
+ V +LD E+VA D + + LPFQ + R R+ + ++ V V + AFD L
Sbjct: 318 ADAVDEPV---ILDGEVVAMDDDGEP-LPFQEILRRFRRKHDVGRMREEVRVELRAFDCL 373
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLI 615
+ G LL + L R + L + + L S D +EI + A+DA EG++
Sbjct: 374 HAGGDDLLTDPLSARHDRLTAVLGGDSA--AVSDLLLSDDAEEIAAYEADALDAGHEGIM 431
Query: 616 IKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLAC- 674
+K DA Y P R NWLK K D ++LDLV A G G+R G FLL+
Sbjct: 432 LKNP--DAPYSPGDRGKNWLKRKPDV-----ETLDLVVTGAEWGEGRRAEFLGTFLLSAR 484
Query: 675 --YDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
DS ++ F++I K+ TG ++ L E + L ++ R + D I P V FE
Sbjct: 485 VEADSGDDAFETIGKVATGITDEELAELTDLLEPEI---EREAGKEVD-IRPSVVFE 537
>gi|330506981|ref|YP_004383409.1| DNA ligase [Methanosaeta concilii GP6]
gi|328927789|gb|AEB67591.1| DNA ligase [Methanosaeta concilii GP6]
Length = 556
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 147/561 (26%), Positives = 258/561 (45%), Gaps = 51/561 (9%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F+ + + + +G + D+V L+ + E V ++ + +P+ + L +G
Sbjct: 4 FLSFAELCQRVEGVSGSLEKVDLVAAFLKNL--DDDELAVASGFIMGDLFSPSMD-LVMG 60
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ-----SMMRKPDPLTITK 307
+G + + +A+A ACG + + + GD GLVA A+ + + K +PL+I +
Sbjct: 61 VGPSILYEAMARACGCSTERISDMLRATGDPGLVASAAVDKKKPIGFAAFIKDEPLSIKE 120
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
V+ +A+ +GK SQ+ K ++ L AT E QY+ RL +RIG+ E + A+
Sbjct: 121 VYQRLVAVARASGKGSQDAKVKNLQYLFSQATPLEAQYIARLAIEDMRIGIGEGGVRDAI 180
Query: 368 GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
QA +++ SK +E A + + V K L D S
Sbjct: 181 AQA--FSQDASK--------VERAYNLTNDIGLVAVNARK---GTLAD--------LSVL 219
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERN 486
PI MLA+ +G+S + + E+KYDG R QIH +DG V I+SR E
Sbjct: 220 INHPIKMMLAQVGEGISASMQELGSA--AIEWKYDGARVQIH--KDGKRVRIFSRRLEDV 275
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIK 544
T P++V ++ +LD E+VA ++ + L FQ + R R+ NV +
Sbjct: 276 TRSLPEIVRLAQEVRADKA---ILDGEVVAIGKDSRP-LAFQEILKRFRRKYNVEKQAKE 331
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ ++ FD++Y +GQ + L RRE L +P A + S + ++
Sbjct: 332 TPLHLFLFDLIYLDGQSTVDLPLTRRRELLEGI--ADPSIL--ADQVISDSVQRAEEIYH 387
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A++ EGLI+K + + Y P KR NWLK+K + ++LDL I A G G+R
Sbjct: 388 QALEKGHEGLILK--NSMSVYAPGKRGKNWLKIK-----PVMETLDLAVIGAKWGEGRRA 440
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
G++ LAC D + Q I + TG ++ L E + R ++ + +
Sbjct: 441 SFLGSYRLACLDEATSKLQDIGWVATGLTDEALAELTELFRELILVQNGMEVELKPAVIF 500
Query: 725 DVWFEPTERPETSNSPASIVY 745
+V +E ++ ++ +S ++ +
Sbjct: 501 EVAYEEIQKSQSYSSGYALRF 521
>gi|448419013|ref|ZP_21580169.1| DNA ligase (ATP) [Halosarcina pallida JCM 14848]
gi|445675999|gb|ELZ28526.1| DNA ligase (ATP) [Halosarcina pallida JCM 14848]
Length = 574
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 243/505 (48%), Gaps = 50/505 (9%)
Query: 230 DLVP-VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAK 288
DL+P + L ++ PA++ ELG+ + ++A+ A G ES V+++++E GDLG A
Sbjct: 35 DLLPRLAVLVRGRLFPAYDRGELGVSSSLTLEAILAATGAAESEVRERWRETGDLGDAAA 94
Query: 289 AS---RSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQY 345
+ Q++ + LT+ +V D R +A G+ SQ ++ + + L+ AT E +Y
Sbjct: 95 WAVDNGGQQTLFSRE--LTVERVHDDLRGLADFEGEGSQGRRVDALAGLVSDATADEARY 152
Query: 346 LIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVY 405
++R LR+G+ E T+ A+ A + +E+ S + V++ + V +
Sbjct: 153 VVRTALGHLRVGVGEGTIRDAVAVAFLGDEEGST-------------EAVERAYQVTNDF 199
Query: 406 EKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDME---FTCEYKYD 462
+V DG + PI MLA+ + + E + CEYKYD
Sbjct: 200 -GVVAETARDGGVDALRELDVELFRPIQLMLAEKAETLGEGLADAAADGGEAVRCEYKYD 258
Query: 463 GERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD---- 518
G R QIH ++ V +++R E T +FPDVV AV + + + D E+V Y
Sbjct: 259 GIRVQIH-VDGDEVRLFTRRLEEVTPQFPDVVRAVR--EGVAAERAIFDGELVGYAPETV 315
Query: 519 -REKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLY 575
E++ + FQTLS R ++ + +I ++ V ++ FD LY +G+ L R + L
Sbjct: 316 AEERRSPVVFQTLSRRVKRESDIEEIVREIPVVVHLFDCLY-DGETALDRPASERLDRLE 374
Query: 576 DSF-----EEEPGF--FQFATTLTSI--DLDEIQKFLDAAVDASCEGLIIKTMDRDATYE 626
+F + E G + AT+ ++ D D + A++ EGL++K A Y+
Sbjct: 375 AAFSPVAPDAEAGVAGLERATSASASPDDPDPAAALYEEALERGHEGLMMKNAA--AAYQ 432
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
P +R LKLK + LDLV A + G+R+ G LACYD +E + +
Sbjct: 433 PGRRVGRMLKLKPTM-----EPLDLVVTRAKYSEGRRSEWLGRLYLACYDPETDELREVG 487
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPK 711
++ TG+++ L + L ++V+ +
Sbjct: 488 RLSTGYTDEELAALTEELEARVVNR 512
>gi|359417761|ref|ZP_09209830.1| hypothetical protein HRED_00593 [Candidatus Haloredivivus sp. G17]
gi|358031854|gb|EHK00689.1| hypothetical protein HRED_00593 [Candidatus Haloredivivus sp. G17]
Length = 553
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 239/488 (48%), Gaps = 48/488 (9%)
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAK- 288
DL VV L+ +I+P E L+LG+ +++K +++A GR E V++ ++ GDLG A+
Sbjct: 36 DLEDVVMLSLGRISPKWEDLDLGVSSKTLVKIISKASGRKEREVEEVWKTSGDLGDAAEE 95
Query: 289 --ASRSSQSMMRKPDPLTITKVFDTFRLIA--KEAGKD---SQEKKKNRIKALLVAATDC 341
+ Q +M + LT+ V + R +A +E G +Q+KK+ + LL +A
Sbjct: 96 MIEGKKQQRLMSR--KLTVKNVMERLRKVAEMEEEGLSQSVNQDKKQKMLADLLSSAEPE 153
Query: 342 EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSV 401
E +YL R++ LRIG+ E T+ AL A + E + V++ +
Sbjct: 154 EARYLARIMLENLRIGIGEGTVRDALDDAFLDGENSQE---------------VQRAYDY 198
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDME--FTCEY 459
+ K+ A G+ L N P+ MLA+ + E F+ + ++
Sbjct: 199 SNDFRKVASA-TRKGLEAL-NEIDLKLNRPVNSMLAQKVDTIEE---GFETVGKPAAVDF 253
Query: 460 KYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDR 519
KYDG RAQIH L++G +I++R E T +FPDV V + + ++D EIV
Sbjct: 254 KYDGLRAQIH-LKNGEAKIFTRRLENVTEQFPDVKAYVE--ENIDAENCIIDSEIVGV-- 308
Query: 520 EKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDS 577
+++PFQ LS R ++ + ++ + V + FD++Y + L+ + R L
Sbjct: 309 RDGEVIPFQQLSKRIKRKYEIEKLRNQIPVEVRPFDLIYIE-ESLMSRPYKERWNELESI 367
Query: 578 FEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKL 637
E T+TS + +E+ + ++ EG+++K++ DA Y+P KR +KL
Sbjct: 368 VETNENLKLVDRTVTSSE-EEVNEMQQESLSQDHEGVMMKSL--DAEYKPGKRVGYMVKL 424
Query: 638 KKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
K + ++LDL I A G+++G G L C++ +E++ + ++ +G ++ L
Sbjct: 425 K-----PVMETLDLAVIGAQWSEGRKSGWLGRLKLGCWNEKEQEYEMVGRMSSGLTDKQL 479
Query: 698 EERSSSLR 705
EE + L+
Sbjct: 480 EEITERLK 487
>gi|354611440|ref|ZP_09029396.1| DNA ligase [Halobacterium sp. DL1]
gi|353196260|gb|EHB61762.1| DNA ligase [Halobacterium sp. DL1]
Length = 555
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 223/473 (47%), Gaps = 49/473 (10%)
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGR--TESHVKKQYQEMGDLGLVA---- 287
V ++ PAH +L IG +ALA A G + S V+ + E GD+G VA
Sbjct: 40 VARFVQGRVFPAHSETKLDIGPRLCYEALARAAGTNVSVSDVEDRLAETGDIGEVATSLD 99
Query: 288 ---KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQ 344
+A ++ D LT+T VF +A G SQ++K + L + E +
Sbjct: 100 LGGQAGLAAFGDESGGDDLTVTAVFTELEALAAAEGDGSQDEKVTLLFGLFNRCSSEEAR 159
Query: 345 YLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPV 404
YL RL+ ++RIG+ E T+ A+ AA ++ P++ VK+ V
Sbjct: 160 YLARLVLGEMRIGVGEGTVRDAI--AAAFD-----------LPVD----AVKRALQVSND 202
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
Y + DG L + G P+ MLA+ V++ + ++ E E K+DG
Sbjct: 203 YGLVAETARDDGESGL-DAMHLEVGRPVQAMLAQAGT-VTDALEEW--AEAAVETKFDGA 258
Query: 465 RAQIHYLEDG-SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQK 523
R Q+H+ DG +V +YSRN E T P+VV V + V +LD E VA +
Sbjct: 259 RLQVHW--DGENVSLYSRNMEDVTAALPEVVEFVEEHVEAPV---ILDGEAVAVSADGDP 313
Query: 524 ILPFQTLSTRARKNVSLSDIK--VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEE 581
LPFQ + R R+ + ++ V V + AFD L+ G LL+ R E L +E
Sbjct: 314 -LPFQEILKRFRRKHDVEAMRQEVRVELNAFDCLHAGGDDLLEAPFLERYERLEAVVGDE 372
Query: 582 PGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDY 641
+ L + D DEI F + A+D+ EG+++K D DA Y P R +WLK K D
Sbjct: 373 SAVSEL---LVTDDPDEIAAFEERALDSGHEGIMLK--DPDAAYTPGDRGKHWLKRKPDV 427
Query: 642 IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
++LDLV A G G+R G FLL+ D +++ F++I K+ TG ++
Sbjct: 428 -----ETLDLVVTGAEWGEGRRASFLGTFLLSARDEDDDAFETIGKVATGITD 475
>gi|406984840|gb|EKE05753.1| hypothetical protein ACD_19C00182G0081 [uncultured bacterium]
Length = 552
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 149/545 (27%), Positives = 256/545 (46%), Gaps = 61/545 (11%)
Query: 209 RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR 268
R+ IT I+ + + ETT +++ VVYL+ +AP +E + L + + ++++++ A
Sbjct: 19 RLEITAILKELFK---ETTDKEIKEVVYLSLGTLAPNYESILLNLAEKMVLRSISLAYDT 75
Query: 269 TESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKK 328
V K Y++ GD G VA++ S S LT+++V+ IA + G+ SQ++K
Sbjct: 76 DLVEVTKLYKKYGDCGDVAQSLSISLS---NKKSLTVSEVYKKLVGIANDGGEGSQDRKI 132
Query: 329 NRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPL 388
+ LL +++ R+ KLR+G +E+T+L ALG +E + +P + L
Sbjct: 133 VKFAELLKDLNTLSVRFVTRIPVGKLRLGFSEKTILDALGVGE--SEYNIRPDIGYIAEL 190
Query: 389 EEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVN 448
++ K+ + G+P+ PMLA SE++
Sbjct: 191 AKSHKL---------------------------SAIIPVVGVPVVPMLAARLNSTSEMIK 223
Query: 449 KFQDMEFTCEYKYDGERAQIHY-LEDGSVEIYSRNAER-NTGKFPDVVLAVSRLKKPSVR 506
K E + E K+DG R IH+ +D ++I++RN N FP+++ +K V
Sbjct: 224 KMG--EVSVEPKFDGLRIFIHFRRKDNLIKIFTRNMNAININTFPELMTLGDHIKADEV- 280
Query: 507 SFVLDCEIVAYDREKQKILPFQ-TLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQE 565
+LD E V D ++Q + FQ T+S R + V + ++ + FDIL NG+ L+ E
Sbjct: 281 --ILDTEAVGLDPKRQMFVDFQKTVSRRRKHEVEKNSTEIPLQFQVFDILLVNGKSLINE 338
Query: 566 QLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATY 625
+ VRRE L T+T D D I+ + + EG+++K + Y
Sbjct: 339 EYLVRREILKTQILNSKLLRVDENTITK-DPDIIKNLHEKYLKIGLEGVVVKRA--NGKY 395
Query: 626 EPSKRSLNWLKLKKDYIES----IGDSLDLVPIAAFHGRGKRTGV-YGAFLLACYDSNNE 680
+ NW+K+K+ +E + D+LD + + F G+GKR G L+ D +
Sbjct: 396 VSGRTGWNWVKMKE--VEGQDGRLSDTLDCIVMGYFSGKGKRAQFGLGKILVGIKDG--D 451
Query: 681 EFQSICKIGTGFSEAML---EERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETS 737
+ ++ K+GTG +E ML +R L SK +PK Y + PDVW P+ E +
Sbjct: 452 KILTLTKVGTGLTEDMLVQIRKRLDKLESKEMPKK---YNAQKDLIPDVWAIPSLVVEVT 508
Query: 738 NSPAS 742
S
Sbjct: 509 GDSIS 513
>gi|284165177|ref|YP_003403456.1| ATP-dependent DNA ligase I [Haloterrigena turkmenica DSM 5511]
gi|284014832|gb|ADB60783.1| DNA ligase I, ATP-dependent Dnl1 [Haloterrigena turkmenica DSM
5511]
Length = 592
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 243/512 (47%), Gaps = 70/512 (13%)
Query: 228 PEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRT--ESHVKKQYQEMGDLGL 285
P+ L V ++ PA + +L IG + +A+A A G V+++ E+G++G
Sbjct: 49 PQTLEVVARFVQGRVFPAWDSTKLDIGPTTCYEAIARAAGTNVGSDDVEERLAEVGEIGE 108
Query: 286 VAKA---------------SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNR 330
VA + + + + LT+ +V++T +A G SQ++K +
Sbjct: 109 VAASYDFGGQQGLGAFTGGGGGNGAGGAAGNDLTVREVYETLADLAAAEGSGSQDRKIDL 168
Query: 331 IKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEE 390
+ L + E +YL RL+ S++RIG+ E ++ A+ +A P+E
Sbjct: 169 LFGLFNRCSSEEARYLARLVLSEMRIGVGEGSVRDAISEA-------------FDVPVEH 215
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF 450
V++ V Y ++ +G L + G P+ MLA+ V++ + ++
Sbjct: 216 ----VERALQVSNDYGQVARVARDEGREGL-DAMDLEVGRPVQAMLAQAGT-VTDALEEW 269
Query: 451 QDMEFTCEYKYDGERAQIHYL--EDGSVE--IYSRNAERNTGKFPDVV-LAVSRLKKPSV 505
E E+KYDG R Q+H+ +DG+ E ++SRN E T FP+VV A L++P+
Sbjct: 270 D--EAAVEWKYDGARVQLHHRIGDDGTTETCVFSRNMEEVTDAFPEVVEFADETLEEPA- 326
Query: 506 RSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILYRNGQPLL 563
+LD E+VA D E + LPFQ + R R+ ++ + DV + FD L+ G+ LL
Sbjct: 327 ---ILDGEVVAID-EDDEPLPFQEVLKRFRRKHDVAKAREDVTVRPVFFDCLHAGGEDLL 382
Query: 564 QEQLRVRREHLY-------DS----FEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCE 612
+E L R E L DS E+E + T+ D DEI+ A++A E
Sbjct: 383 EEPLTTRHERLRAVLADADDSSDATVEDERDIEALSLLWTTDDPDEIEAIDAEALEAGHE 442
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
G+++K D D+ Y P +R +W K K D ++LD V A G G+R G F L
Sbjct: 443 GIMLK--DPDSAYSPGRRGKHWRKRKPDV-----ETLDCVVTGAEWGEGRRATFLGTFEL 495
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ ++ +++ K+ TG ++ LEE ++ L
Sbjct: 496 SV--RAGDDLETVGKVATGITDEKLEELTALL 525
>gi|448603029|ref|ZP_21656850.1| DNA ligase, ATP dependent [Haloferax sulfurifontis ATCC BAA-897]
gi|445746225|gb|ELZ97687.1| DNA ligase, ATP dependent [Haloferax sulfurifontis ATCC BAA-897]
Length = 585
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 243/537 (45%), Gaps = 44/537 (8%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHV 273
V ++L + +DL V ++ PA + L IG +A+A A G + V
Sbjct: 22 VVSLLSDLFRDAGDDLPTVARFVQGRVFPAWDSTTLDIGPRLCHEAIARAAGPNVSADDV 81
Query: 274 KKQYQEMGDLGLVAKA-SRSSQSMMRK-----PDPLTITKVFDTFRLIAKEAGKDSQEKK 327
+ + + G++G VA + Q + D LT+ +V R +A +G S+E K
Sbjct: 82 EDRLADRGEIGAVAASYDFGGQRGLAAFGSGGQDGLTVAEVDSELRDLAAASGSGSEETK 141
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA----------AVYNEQH 377
+ L E ++L RL+ S++RIG+ E + A+ +A ++
Sbjct: 142 LKTLYGLFNRTAPDEARFLARLVLSEMRIGVGEGAVRDAVAEAFLVDPADAAAIRDDDAD 201
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
S+ ++ EA V + V Y + +G L + G P+ MLA
Sbjct: 202 SETEDAARTRRNEAVAAVARALQVSNDYGMVAELARDEGEAGL-DGVRLEVGRPVQAMLA 260
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ ++ +++++ E K+DG R Q+H DG V ++SRN E TG P+VV V
Sbjct: 261 QAGT-AADALDEWETA--AVETKFDGARVQVHRDADGEVSLFSRNMEDVTGALPEVVEFV 317
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDIL 555
+ V +LD E+VA D + + LPFQ + R R+ + ++ V V + AFD L
Sbjct: 318 ADAVDEPV---ILDGEVVAMDDDGEP-LPFQEILRRFRRKHDVGRMREEVRVELRAFDCL 373
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLI 615
+ G LL + L R + L + + L S D +EI + A+DA EG++
Sbjct: 374 HAGGDDLLTDPLSARHDRLTAVLGGDSA--AVSDLLLSDDAEEIAAYEADALDAGHEGIM 431
Query: 616 IKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLAC- 674
+K DA Y P R NWLK K D ++LDLV A G G+R G FLL+
Sbjct: 432 LKNP--DAPYSPGDRGKNWLKRKPDV-----ETLDLVVTGAEWGEGRRAEFLGTFLLSAR 484
Query: 675 --YDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
DS ++ F++I K+ TG ++ L E + L ++ R + D I P V FE
Sbjct: 485 VEADSGDDAFETIGKVATGITDEELAELTDLLEPEI---EREEGKEVD-IRPSVVFE 537
>gi|448649282|ref|ZP_21679995.1| DNA ligase [Haloarcula californiae ATCC 33799]
gi|445773926|gb|EMA24955.1| DNA ligase [Haloarcula californiae ATCC 33799]
Length = 554
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 159/560 (28%), Positives = 251/560 (44%), Gaps = 72/560 (12%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I +E+ IT+ V ++ R + DL + ++ PA+E L IG +A+
Sbjct: 13 IESESADTAITEAVTDLFRA----SGSDLSTLARFVQGRVFPAYESRTLDIGPRLCYEAI 68
Query: 263 AEACGRTES--HVKKQYQEMGDLGLVA--------KASRSSQSMMRKPDPLTITKVFDTF 312
A A G+ S V+++ +MG++G VA + + + D LT+ ++ D
Sbjct: 69 ARAAGQNVSADDVEQRLADMGEIGAVAASYDLGGQQGLAAFGAGGGGDDALTVAELDDEL 128
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
R +A G SQ K + + L + E YL RL+ S +RIG+ E T+ A+ A
Sbjct: 129 RNLAAVDGSGSQGTKVDILFGLFSRCSSTEAGYLARLVLSGMRIGVGEGTVRDAVAAA-- 186
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
P+E V++ V Y + +G L+ T + G P+
Sbjct: 187 -----------FDVPVE----AVERAVQVSNDYGMVAEVARDEGESGLA-TVTLEIGRPV 230
Query: 433 GPMLAKPTKGVSEIVNKFQDME-FTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKF 490
MLA+ + +D + E+KYDG R Q+H+ DG ++SRN E T
Sbjct: 231 QAMLAQ----AGTVAGALEDWDRAAVEWKYDGARVQVHF--DGEDARLFSRNMEEVTDPL 284
Query: 491 PDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
P+VV V S L P+ +LD E+VA D LPFQ + R R+ ++ + DV +
Sbjct: 285 PEVVETVESTLDAPA----ILDGEVVAVDNGGDP-LPFQEVLRRFRRKHDVAAAREDVAV 339
Query: 550 --YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
+AFD L+ G+ LL L R + L F + + S D DEI+ AA+
Sbjct: 340 RLHAFDCLHAAGEDLLDAALETRHDRLESLFPADSDV--VSQMWLSDDPDEIEDLETAAL 397
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
DA EG+++K D A Y P KR +W K K D ++LD V A G G+R V
Sbjct: 398 DAGQEGIMLK--DPTAAYSPGKRGKHWRKRKPDV-----ETLDCVVTGAEWGEGRRANVL 450
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD----TIS 723
G+F L+ ++ + ++ + TG ++ L++ + + PY R D +
Sbjct: 451 GSFELSV--RTDDGYATVGNVATGITDEELDD--------LTERFEPYIRSEDGREVVLD 500
Query: 724 PDVWFE-PTERPETSNSPAS 742
P V FE E + S S AS
Sbjct: 501 PAVVFEVGYEEIQASQSYAS 520
>gi|297618723|ref|YP_003706828.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus voltae A3]
gi|297377700|gb|ADI35855.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus voltae A3]
Length = 597
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 145/518 (27%), Positives = 245/518 (47%), Gaps = 68/518 (13%)
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS-QS 295
++ ++ +E ELGIG +++A ++ G +E + + +E GDLG + +S +
Sbjct: 59 ISIGRVFAEYENKELGIGYNLLVEAF-KSVGISEKDIYAKVKETGDLGQSVELLKSEVKQ 117
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
+ LTI +V+ + + ++ G SQ+KK I LL++A E +YL RL+ +R
Sbjct: 118 ITLFQTKLTIKEVYSSLKKLSSIEGTSSQKKKIRTISNLLISANALETRYLARLILEDMR 177
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT- 414
IG+ T+L A ++Y P P ++ + ++V KI LL+
Sbjct: 178 IGMNISTILGAF---SIY---FGIPKPELE-----------KTYAVSNDIGKIGERLLSY 220
Query: 415 DGVW--NLSNTCSFTPGI--PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY 470
DG + N + PI PMLA+ T +S+ + + +F E KYDG R QIH
Sbjct: 221 DGNYYENFKKDSELHLKLFRPIKPMLAQLTPSISDAIIEMGIPQF--ETKYDGARVQIHK 278
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
D +V+IYSR E T P++ V +KK F+++ E VA D E K PFQ +
Sbjct: 279 NGD-NVKIYSRRLEDITNSIPEI---VEEVKKIDCNQFIVEGECVAID-ENGKPRPFQDI 333
Query: 531 STRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF---- 584
R R+ + + ++ + ++ FD++Y++G+ + + L+VRR+ L E F
Sbjct: 334 LRRFRRKYDIEKMTSEIKLRVFLFDVIYKDGES-ISDSLQVRRQKLESMLNIENNFNIDE 392
Query: 585 ------------FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSL 632
+T L + D+ + QKF D + EG++IK ++DATY R
Sbjct: 393 NGEIIVSPINDVINLSTKLITNDVKKAQKFFDWCLSIGHEGVMIK--NQDATYTAGSRVK 450
Query: 633 NWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY---DSNNEEFQSICKIG 689
K K D+LD+V A G GKR YG++ +A +S + I +G
Sbjct: 451 TMYKFKPTL-----DNLDVVITRAKFGMGKRKDWYGSYEIAVRGNGESEDNNLYVIGHVG 505
Query: 690 TGFSEAMLEE--------RSSSLRSKVIPKPRPYYRFA 719
+G +E LEE + + L +VI +P+ + +
Sbjct: 506 SGLTEENLEELTKKINEIKEADLGDEVIVEPKIVFEVS 543
>gi|448640231|ref|ZP_21677285.1| DNA ligase [Haloarcula sinaiiensis ATCC 33800]
gi|445762021|gb|EMA13255.1| DNA ligase [Haloarcula sinaiiensis ATCC 33800]
Length = 554
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 251/560 (44%), Gaps = 72/560 (12%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I +E+ IT+ V ++ R + DL + ++ PA+E L IG +A+
Sbjct: 13 IESESADTAITEAVTDLFRA----SGSDLSTLARFVQGRVFPAYESRTLDIGPRLCYEAI 68
Query: 263 AEACGRTES--HVKKQYQEMGDLGLVA--------KASRSSQSMMRKPDPLTITKVFDTF 312
A A G+ S V+++ +MG++G VA + + + D LT+ ++ D
Sbjct: 69 ARAAGQNVSADDVEQRLADMGEIGAVAASYDLGGQQGLAAFGAGGGGDDALTVAELDDEL 128
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
R +A G SQ K + + L + E YL RL+ S++RIG+ E T+ A A
Sbjct: 129 RNLAAVDGSGSQGTKVDILFGLFSRCSSTEAGYLARLVLSEMRIGVGEGTVRDAAAAA-- 186
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
+ + + V++ V Y + +G L+ T + G P+
Sbjct: 187 ---------------FDVSVEAVERAVQVSNDYGMVAEVARDEGESGLA-TVTLEIGRPV 230
Query: 433 GPMLAKPTKGVSEIVNKFQDME-FTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKF 490
MLA+ + +D + E+KYDG R Q+H+ DG ++SRN E T
Sbjct: 231 QAMLAQAGT----VAGALEDWDRAAVEWKYDGARVQVHF--DGEDARLFSRNMEEVTDPL 284
Query: 491 PDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
P+VV V S L P+ +LD E+VA D LPFQ + R R+ ++ + DV +
Sbjct: 285 PEVVETVESTLDAPA----ILDGEVVAVDNGGDP-LPFQEVLRRFRRKHDVAAAREDVAV 339
Query: 550 --YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
+AFD L+ G+ LL L R + L F + + S D DEI+ AA+
Sbjct: 340 RLHAFDCLHAAGEDLLDAALETRHDRLESLFPADSDV--VSQMWLSDDPDEIEDLETAAL 397
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
DA EG+++K D A Y P KR +W K K D ++LD V A G G+R V
Sbjct: 398 DAGQEGIMLK--DPTAAYSPGKRGKHWRKRKPDV-----ETLDCVVTGAEWGEGRRANVL 450
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD----TIS 723
G+F L+ ++ + ++ + TG ++ L++ + + PY R D +
Sbjct: 451 GSFELSV--RTDDGYATVGNVATGITDEELDD--------LTERFEPYIRSEDGRDVVLD 500
Query: 724 PDVWFE-PTERPETSNSPAS 742
P V FE E + S S AS
Sbjct: 501 PAVVFEVGYEEIQASQSYAS 520
>gi|424811979|ref|ZP_18237219.1| DNA ligase I, ATP-dependent, dnl1, partial [Candidatus
Nanosalinarum sp. J07AB56]
gi|339756201|gb|EGQ39784.1| DNA ligase I, ATP-dependent, dnl1 [Candidatus Nanosalinarum sp.
J07AB56]
Length = 501
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 234/473 (49%), Gaps = 44/473 (9%)
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA---SRSSQSMMRKPDPLTIT 306
E G+ +++ ++ A GR+E + + ++E GDLGL A+ ++ Q +++K LT+
Sbjct: 2 ETGLSSKTMVDVISRATGRSEEDITEVWREEGDLGLAAEEMVDGKTQQRLVQKT--LTVE 59
Query: 307 KVFDTFRLIA--KEAGKDSQE--KKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
+V T IA +E +S + KK + L+ A++ E +Y +R L +R+G+AE
Sbjct: 60 EVMQTLDEIASMEEEALESVDVSKKVGKAADLVSASSPREARYAVRNLLQNMRLGVAEGL 119
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+ AL +A ++ +H + ++ + + + ++ A DG+ N+
Sbjct: 120 IRDALAEA-FFDGEHVED--------------IQHAYDLTNDFRQVAKAC-QDGIENVQE 163
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDME--FTCEYKYDGERAQIHYLEDGSVEIYS 480
P+ MLAK + + E F+++ ++KYDG RAQIH + G V++++
Sbjct: 164 -LEMELFRPVNSMLAKKVESIEE---GFEEVGRPAGIDFKYDGVRAQIH-VSGGEVKVFT 218
Query: 481 RNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSL 540
R E T +FPDVV AV + + ++D EI+ YD E +PFQ LS R ++ +
Sbjct: 219 RRLEDITEQFPDVVEAVE--QNIDAENAIIDTEIIGYDPENDSTVPFQRLSKRVKRKYDI 276
Query: 541 SDIK--VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
++ + V + FD++Y +G LLQ+ R E L E+ + + + ++
Sbjct: 277 ERLRQEIPVEVRPFDLIYLDG-SLLQQTYAERLESLRGIVREKRRVLRLVDHVETSSKEK 335
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFH 658
+ +F A EG+++K MD A Y+P KR +KLK + ++LDL + A
Sbjct: 336 VAEFDQRATSNGHEGIMMKKMD--ARYKPGKRVGYMVKLK-----PVMETLDLAVVGAKW 388
Query: 659 GRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
G+R+G G L ++ +E + + ++ TG ++ LE + L V+ +
Sbjct: 389 SEGRRSGWLGRLKLGAWNEEEQEHEMVGRMATGLTDDELERITDRLEPLVVEE 441
>gi|389847079|ref|YP_006349318.1| DNA ligase (ATP) [Haloferax mediterranei ATCC 33500]
gi|448614972|ref|ZP_21664000.1| DNA ligase (ATP) [Haloferax mediterranei ATCC 33500]
gi|388244385|gb|AFK19331.1| DNA ligase (ATP) [Haloferax mediterranei ATCC 33500]
gi|445753059|gb|EMA04478.1| DNA ligase (ATP) [Haloferax mediterranei ATCC 33500]
Length = 585
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 233/503 (46%), Gaps = 42/503 (8%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHV 273
V ++L + +DL V ++ PA + L IG +A+A A G + V
Sbjct: 22 VVSLLSDLFRDADDDLSTVARFVQGRVFPAWDSTTLDIGPRLCHEAIARAAGPNVSADDV 81
Query: 274 KKQYQEMGDLGLVAKA-SRSSQSMMRK-----PDPLTITKVFDTFRLIAKEAGKDSQEKK 327
+ + + G++G VA + Q + D LT+ +V R +A +G S+E K
Sbjct: 82 EDRLADRGEIGAVAASYDFGGQRGLAAFGAGGQDGLTVAEVDSELRALAAASGSGSEETK 141
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKP--PPNIQ 385
+ L E ++L RL+ S++RIG+ E T+ A+ +A + + + ++
Sbjct: 142 LKTLYGLFNRTDPDEARFLARLVLSEMRIGVGEGTVRDAIAEAFLVAPEDAAAIRDDDVD 201
Query: 386 SPLEEAAK--------IVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
+ E AA+ V + V Y + +G LS G P+ MLA
Sbjct: 202 TETETAARERRDEAIATVARALQVSNDYGMVAEVTRDEGESGLSE-VRLEVGRPVQAMLA 260
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ ++ +++++ E K+DG R Q+H E G V ++SRN E T P++V V
Sbjct: 261 QAGT-AADALDEWETA--AVETKFDGARVQVHRDEAGDVSLFSRNMEDVTNALPEIVEFV 317
Query: 498 -SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDI 554
+ +P+ +LD E+VA D + + LPFQ + R R+ + ++ V V + AFD
Sbjct: 318 EDAVDEPA----ILDGEVVAMDDDGEP-LPFQEILRRFRRKHDVGRMREEVRVELRAFDC 372
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGL 614
L+ G LL E L R + L P + L S DE+ + A++A EG+
Sbjct: 373 LHAAGDDLLTEPLTTRHDRLATVL--GPDSDAVSDLLLSDCPDEVAAYESEALEAGHEGI 430
Query: 615 IIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLAC 674
++K DA Y P R NWLK K D ++LDLV A G G+R G FLL+
Sbjct: 431 MLKNP--DAAYSPGDRGKNWLKRKPDV-----ETLDLVVTGAEWGEGRRAKFLGTFLLSA 483
Query: 675 Y---DSNNEEFQSICKIGTGFSE 694
+S ++EF++I K+ TG ++
Sbjct: 484 RVDDESGDDEFETIGKVATGITD 506
>gi|313126407|ref|YP_004036677.1| ATP-dependent DNA ligase i [Halogeometricum borinquense DSM 11551]
gi|448286251|ref|ZP_21477485.1| ATP-dependent DNA ligase i [Halogeometricum borinquense DSM 11551]
gi|312292772|gb|ADQ67232.1| ATP-dependent DNA ligase I [Halogeometricum borinquense DSM 11551]
gi|445575084|gb|ELY29566.1| ATP-dependent DNA ligase i [Halogeometricum borinquense DSM 11551]
Length = 618
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 155/592 (26%), Positives = 260/592 (43%), Gaps = 83/592 (14%)
Query: 211 LITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR-- 268
L+ D+ C+ +DL V ++ PA + L IG + +A+A A G+
Sbjct: 25 LVRDLFCD--------AGDDLPVVTRFVQGRVFPAWDSTTLDIGPRLLREAIARAAGQNV 76
Query: 269 TESHVKKQYQEMGDLGLVAKASR--SSQSMMR----KPDPLTITKVFDTFRLIAKEAGKD 322
T V+ + + G++G VA A Q + D LT+ +V +T R +A +G
Sbjct: 77 TADDVEDRLADAGEIGSVAAAYDFGGQQGLAAFSGGTNDGLTVNEVDETLRDLAAASGPG 136
Query: 323 SQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN-------- 374
S+++K N + L A+ E +YL RL+ ++RIG+ T+ A+ +A + +
Sbjct: 137 SEDRKLNTLFGLFNRASSSEAKYLARLVLGEMRIGVGAGTVRDAVAEAFLADFESATEES 196
Query: 375 ------------EQHSKPPPNIQSP-------------------LEEAAKIVKQVFSVLP 403
E SK P +E V++ V
Sbjct: 197 EDDEGGPKDDDAEDRSKDDDAEDRPKDDDTEDTADDADEPTTYATDEQLAAVERALQVSN 256
Query: 404 VYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDG 463
Y + +G L G P+ MLA+ V++ ++++ E E K+DG
Sbjct: 257 DYGMVAVTARDEGKEGL-KAVHLEVGRPVQAMLAQAGT-VTDALDEWD--EAAVERKFDG 312
Query: 464 ERAQIHYL------EDG-SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVA 516
R Q+H +DG V +YSRN + T P++V V V +LD E+VA
Sbjct: 313 ARVQVHVAPDDASADDGEDVSLYSRNMDDVTDALPEIVEFVEDHVDVPV---ILDGEVVA 369
Query: 517 YDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDILYRNGQPLLQEQLRVRREHL 574
D + LPFQ + R R+ + ++ V V ++AFD L+ + + LL + R L
Sbjct: 370 VDDDGAP-LPFQEVLRRFRRKHDVGRMREEVRVELHAFDCLHADSEDLLDAPVTERHARL 428
Query: 575 YDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNW 634
+ + L S D DEI F +A++DA EG+++K D+TY P R NW
Sbjct: 429 AEVLADTNAVSDL---LVSEDADEIAAFEEASLDAGHEGIMLKNP--DSTYSPGNRGKNW 483
Query: 635 LKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYD-SNNEEFQSICKIGTGFS 693
LK K D +++DLV A G G+R G FLL+ D S + ++ +I K+ TG +
Sbjct: 484 LKRKPDV-----ETVDLVVTGAEWGEGRRANHLGTFLLSARDESGDGDYATIGKVATGIT 538
Query: 694 EAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASIVY 745
+ L E S L +++ + ++ +V +E +R T +S ++ +
Sbjct: 539 DEELAELSDLLEPEIVSEDGQTVELNPSVVFEVGYEEIQRSPTYSSGYALRF 590
>gi|433422414|ref|ZP_20405974.1| DNA ligase, ATP dependent [Haloferax sp. BAB2207]
gi|432198642|gb|ELK54902.1| DNA ligase, ATP dependent [Haloferax sp. BAB2207]
Length = 585
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 244/537 (45%), Gaps = 44/537 (8%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHV 273
V ++L + +DL V ++ PA + L IG +A+A A G + V
Sbjct: 22 VVSLLSDLFSDAGDDLPTVARFVQGRVFPAWDSTTLDIGPRLCHEAIARAAGPNVSADDV 81
Query: 274 KKQYQEMGDLGLVAKA-SRSSQSMMR-----KPDPLTITKVFDTFRLIAKEAGKDSQEKK 327
+ + + G++G VA + Q + + D LT+ +V R +A +G S+E K
Sbjct: 82 EDRLADRGEIGAVAASYDFGGQRGLAAFGSGEQDGLTVAEVDSELRALAAASGSGSEETK 141
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY----------NEQH 377
+ L E ++L RL+ S++RIG+ E T+ A+ +A + ++
Sbjct: 142 LKTLYGLFNRTDPDEARFLARLVLSEMRIGVGEGTVRDAVAEAFLVAPRTPAAIRDDDAD 201
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
S+ + EA V + V Y + +G L + G P+ MLA
Sbjct: 202 SETEAAARERRNEAIAAVARALQVSNDYGMVAGLARDEGETGL-DGVRLEVGRPVQAMLA 260
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ ++ ++++ E K+DG R Q+H DG V ++SRN E T P+VV V
Sbjct: 261 QAGT-AADALDEWGTA--AVETKFDGARVQVHRDADGEVSLFSRNMEDVTDALPEVVEFV 317
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDIL 555
+ V +LD E+VA D + + LPFQ + R R+ + ++ V V + AFD L
Sbjct: 318 AGAVDDPV---ILDGEVVAMD-DGGEPLPFQEILRRFRRKHDVDRMREEVRVELRAFDCL 373
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLI 615
+ G LL + L R + L ++ + L S D DEI + A+DA EG++
Sbjct: 374 HAAGDDLLADPLAARHDRLTALLGDDSPV--VSDLLLSDDPDEIAAYEADALDAGHEGIM 431
Query: 616 IKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLAC- 674
+K DA Y P R NWLK K D ++LDLV A G G+R G FLL+
Sbjct: 432 LKNP--DAPYSPGDRGKNWLKRKPDV-----ETLDLVVTGAEWGEGRRAEFLGTFLLSAR 484
Query: 675 --YDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
+S ++ F++I K+ TG ++ L E + L ++ R + D I P V FE
Sbjct: 485 VEAESGDDAFETIGKVATGITDEELAELTDLLEPEI---EREAGKEVD-IRPSVVFE 537
>gi|448576106|ref|ZP_21642149.1| DNA ligase (ATP) [Haloferax larsenii JCM 13917]
gi|445729786|gb|ELZ81380.1| DNA ligase (ATP) [Haloferax larsenii JCM 13917]
Length = 585
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 152/537 (28%), Positives = 240/537 (44%), Gaps = 44/537 (8%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHV 273
+ + L + +DL V ++ PA + L IG +A+A A G + V
Sbjct: 22 IVSYLADLFRDADDDLATVTRFVQGRVFPAWDSTTLDIGPRLCHEAIARAAGPNVSADDV 81
Query: 274 KKQYQEMGDLGLVAKA-SRSSQSMMRK-----PDPLTITKVFDTFRLIAKEAGKDSQEKK 327
+ + E G++G VA + Q + D LT+ +V R +A +G S++ K
Sbjct: 82 EDRLAEQGEIGAVAASYDFGGQRGLAAFGAGGQDGLTVAEVDSELRSLAAASGVGSEDTK 141
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP 387
+ L E +L RL+ S++RIG+ E ++ A+ +A + + + + +
Sbjct: 142 LKTLYGLFNRTDPDEACFLARLVLSEMRIGVGEGSVRDAIAEAFLVADADAAATRDDDAD 201
Query: 388 L----------EEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
+E V + V Y + DG L + G PI MLA
Sbjct: 202 TDTEAAARERRDENIATVARALQVSNDYGMVAEVARDDGEAGLDD-VHLEVGRPIQAMLA 260
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ ++ +++++ E K+DG R Q+H E G V +YSRN E TG P+VV V
Sbjct: 261 QAGT-AADALDEWETA--AVETKFDGARVQVHRDESGEVSLYSRNMEDVTGALPEVVEFV 317
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDIL 555
V +LD E+VA D + LPFQ + R R+ + ++ V V + AFD L
Sbjct: 318 EDAVDCPV---ILDGEVVAMD-DAGDPLPFQEILRRFRRKHDVDQMREEVRVELRAFDCL 373
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLI 615
+ +G LL L R + L ++ + L S D DEI + A+DA EG++
Sbjct: 374 HADGDDLLNAPLTTRHDRLATVLGQDS--EAVSDLLISDDPDEIADYEADALDAGHEGIM 431
Query: 616 IKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY 675
+K DA Y P R NWLK K D ++LDLV A G G+R G FLL+
Sbjct: 432 LKNP--DAAYSPGDRGKNWLKRKPDV-----ETLDLVVTGAEWGEGRRAKFLGTFLLSAR 484
Query: 676 ---DSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
S ++EF++I K+ TG ++ L E + L ++ R + D I P V FE
Sbjct: 485 VEDASGDDEFETIGKVATGITDEQLVELTDLLEPEI---ERESGKEVD-IRPSVVFE 537
>gi|150401292|ref|YP_001325058.1| ATP-dependent DNA ligase I [Methanococcus aeolicus Nankai-3]
gi|224487887|sp|A6UVC4.1|DNLI_META3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|150013995|gb|ABR56446.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus aeolicus Nankai-3]
Length = 562
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 246/516 (47%), Gaps = 39/516 (7%)
Query: 199 VFDMISNETGRILITDIVCNMLRTV-METTPEDLVPVVYLAANKIAPAHEGLELGIGDAS 257
+F I + T R+ + +++ V + P+DL + +A ++ HE ELGIG
Sbjct: 11 IFYKIESTTKRLEKMEYFIELIKMVENKKAPQDLKKICQIAVGRVFAEHENKELGIGPNI 70
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLG--LVAKASRSSQSMMRKPDPLTITKVFDTFRLI 315
+I A+ + G + ++ + GD+G L Q+ + + P T+ +V+ T + +
Sbjct: 71 LIDAII-STGINKKTIQNTINQTGDIGTALEQLGHNIKQTSLFQTPP-TLEEVYTTLKKL 128
Query: 316 AKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE 375
+ G SQ+KK I ++L+ ++ E +YL RL+ +RIG++ T+L A + YN+
Sbjct: 129 STIEGGQSQKKKIRHISSILIKSSPIEQRYLARLILEDMRIGMSIPTILGAF--SKYYNQ 186
Query: 376 QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPM 435
P E KI V + + EK+ ++N PI PM
Sbjct: 187 -----------PKENLEKIYAVVNDIGLLAEKLAQRC---DIYN-DEELQLKIFRPIKPM 231
Query: 436 LAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVL 495
LA+ +++ + + +F E KYDG R QIH +D V+IYSR E T P++
Sbjct: 232 LAQLIGSINDAIIEMGAPQF--ETKYDGARVQIHK-KDNIVKIYSRKLEDITNSIPEI-- 286
Query: 496 AVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFD 553
V +K ++ +++ E VA D+ + PFQ + R R+ ++ I+ +++ +Y FD
Sbjct: 287 -VEEVKNIEAQNLIIEGECVAMDKNGRP-RPFQDILRRFRRKYNIDSIQSEINLKVYVFD 344
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEG 613
ILY N + L++ L RR L + + LT+ + + ++F + ++ EG
Sbjct: 345 ILYYNNKSLIELPLIERRSILEKILTNKHNKLNISHKLTTDNEQKAREFYEWSLSIGHEG 404
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
++IK + +A Y P R K K +SLD+V A G GKR YG+F +A
Sbjct: 405 VMIK--NPNAIYTPGSRVRTMYKFKPTL-----ESLDVVITKAKMGMGKRKEWYGSFEIA 457
Query: 674 CYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
D N + +I +G+G +E L + +++ I
Sbjct: 458 VKDYENNLY-TIGHVGSGLTEEELHNLTEQIKNITI 492
>gi|307354534|ref|YP_003895585.1| DNA ligase I [Methanoplanus petrolearius DSM 11571]
gi|307157767|gb|ADN37147.1| DNA ligase I, ATP-dependent Dnl1 [Methanoplanus petrolearius DSM
11571]
Length = 548
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 237/527 (44%), Gaps = 52/527 (9%)
Query: 207 TGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEAC 266
+GR+ D++ + L + E+L + +I P ++GIG + +++A
Sbjct: 17 SGRLDTIDMIASHLPGL---DDEELPIFIRFLMGRIFPDWSQDKIGIGPNLVFESVAYVA 73
Query: 267 GRTESHVKKQYQEMGDLGLVAK--ASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
G S V ++ + GD+G + S+ Q+ +P + V+ F ++ G SQ
Sbjct: 74 GNDRSKVVREINKQGDVGTAVENILSKKEQTSFFSENP-DLRDVYSDFAYLSSIEGNRSQ 132
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI 384
++K I+ L A E +YL RL+ +LRIG+ E + A+ +A + +
Sbjct: 133 KEKLKVIRKLFANAGGAEGKYLSRLILGELRIGIGEGNIRDAIAKAFDVPTESVEHAYQA 192
Query: 385 QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVS 444
+ L E A I K+ GV L + P+ MLAK ++
Sbjct: 193 ANDLGEIAVIAKK------------------GVDEL-RAVRISLFRPVKMMLAKQGT-IA 232
Query: 445 EIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPS 504
E+V + EYKYDG R Q H D IYSR E T PD+V L K +
Sbjct: 233 EMVE--EQGAIAAEYKYDGTRFQFHKSGD-KCRIYSRKLEEVTTAIPDIV---DILVKTT 286
Query: 505 VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIY--AFDILYRNGQPL 562
+LD E++A D +PFQ + R R+ ++ ++ + FDILY +G+ L
Sbjct: 287 GHDVILDGEVIAVDGNGNP-MPFQHVLKRFRRKHDIASHIENIRLVPNIFDILYLDGETL 345
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRD 622
+ + RR+ L ++ A + S D+ I+ F A+DA EG++IK++
Sbjct: 346 IDKPFEERRKILVENVS-----LHVAPQIVSDDIITIEAFYREALDAGHEGIMIKSLK-- 398
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+ Y P +R W+K+K D++DL + A G GKR ++G+F+LAC D +
Sbjct: 399 SAYTPGQRVRQWIKIKPSV-----DTIDLAVVGAEWGEGKRAHLFGSFILACQDESGRLL 453
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
+ I K+ TGFS+ L L+ I + F P+V FE
Sbjct: 454 R-ISKVATGFSDEALAGVYDLLKDTEISESGKVVSF----EPEVVFE 495
>gi|395645045|ref|ZP_10432905.1| DNA ligase [Methanofollis liminatans DSM 4140]
gi|395441785|gb|EJG06542.1| DNA ligase [Methanofollis liminatans DSM 4140]
Length = 545
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 240/525 (45%), Gaps = 54/525 (10%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV-VYLAANKIAPAHEGLEL 251
F SL+ + I +GR+ + +IV ++L ++E D +PV V ++ P L+L
Sbjct: 3 FAEFSLICERIEGISGRLEMIEIVASVLPHLLE----DELPVFVRFVMGRVFPDWSPLKL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAK---ASRSSQSMMRKPDPLTITKV 308
GIG + +A+ GR ++ V E GD+GL + A++S S + LT+T V
Sbjct: 59 GIGPNLLYEAVGYVAGRKKAAVVAAVNETGDVGLAVERLLATKSQTSFF--SEALTLTGV 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
+ IA G SQ +K I+ LL A E +YL RLL +LRIG+ E + A+
Sbjct: 117 YADCTRIATTDGSRSQREKLRVIEGLLGNAGALEGRYLSRLLLEELRIGVGEGNVRDAVA 176
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
+A + + L E A + +Q L P
Sbjct: 177 RAFAVDASLVAHAHQALNDLGEVALLARQGEEAL-------------------RAVRIEP 217
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
P+ MLA+ + E+V + EYKYDG R Q H + +YSR E TG
Sbjct: 218 FRPVKMMLAQQGT-IGEMVADHGAV--AVEYKYDGTRFQFHKVGK-ECRMYSRKLEDVTG 273
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVD 546
PDV+ A+ R V ++D E++A + + PFQ + R R+ + + +VD
Sbjct: 274 AVPDVIEALDRAIPHDV---IVDGEVIAVKDGRPR--PFQFVLQRFRRKHEVEEAIGRVD 328
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
+ + FDILY +G ++ RR+ L E A S D+ +++ A
Sbjct: 329 LVPHLFDILYLDGDTIIDRPFFERRKIL-----EGTASAYLAPQWVSDDVSRLEEIYADA 383
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
+DA EG+++KT+ DA Y P R NW+K+K D+LDL I A G G+R +
Sbjct: 384 LDAGHEGVMLKTL--DAAYTPGVRGKNWIKIKPAV-----DTLDLAVIGAEWGEGRRARL 436
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
+G+FLLAC E + K+ TG S+ L L+ VI +
Sbjct: 437 FGSFLLAC--QQEGELLPVGKVATGLSDEDLAAIYDLLKDLVIAE 479
>gi|406873061|gb|EKD23335.1| hypothetical protein ACD_82C00116G0001, partial [uncultured
bacterium]
Length = 429
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 213/454 (46%), Gaps = 35/454 (7%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+ F ++S VF+ I +GR+ +T ++ ++L+ + TPE+ + YL+ ++ P + G +
Sbjct: 1 MKFSYVSQVFNEIEKISGRLEMTKLLADLLK---KATPEESKIICYLSLGELKPPYIGTK 57
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFD 310
+ + + IK A G E +KK ++ GDLGLV + + Q + LT+ +V+
Sbjct: 58 FQVAEKNFIKVAAHLLGLDEPEIKKLAKDSGDLGLVLETGKWLQK-----EDLTVLQVYK 112
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
LI + +G SQ+ K + L +++ R++ KLR+G ++ T++ AL
Sbjct: 113 ELELIEEISGTGSQDGKIQSLTKFLQDLDPISAKFIARIVIGKLRLGFSDMTIIDALSWM 172
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
V N+ +I+ +E A I + ++ + DG + T G+
Sbjct: 173 EVGNK-------SIRKNIENAYNICADI--------GLIAHTIKDGGLEAIKNMTITVGV 217
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS---VEIYSRNAERNT 487
PI P A+ I K D + K DG R QIH + + +SRN +
Sbjct: 218 PIRPAAAERMPTAKAIFEKLGDC--IAQPKLDGFRLQIHMDKTHKTPIIRFFSRNLIDMS 275
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVD 546
FPD+ A+ L V+ + + E + YD LPFQ R RK ++ ++
Sbjct: 276 HMFPDITKAIIDL---DVQELICEGEAIVYDPNTGNFLPFQETVKRKRKHDIDQMAEQLP 332
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID-LDEIQKFLDA 605
+ +Y FD+LY +GQ L + RR+ L FE+ G ID +++ + A
Sbjct: 333 LQVYIFDLLYLDGQEYLTKTYTQRRKELLHLFEKYKGEDIKVIEEKKIDNYKDLEDYFVA 392
Query: 606 AVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKK 639
+ + EGL++K + YEP KR+ NW+KLK+
Sbjct: 393 NIASGLEGLVVKK--PSSHYEPGKRNFNWIKLKR 424
>gi|448472766|ref|ZP_21601298.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum aidingense JCM 13560]
gi|445819674|gb|EMA69513.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum aidingense JCM 13560]
Length = 646
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 153/564 (27%), Positives = 250/564 (44%), Gaps = 87/564 (15%)
Query: 226 TTPE--DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHVKKQYQEMG 281
T+P+ DL V ++ PAH+ L IG A +A+A A G + + V+ + E G
Sbjct: 53 TSPDGDDLETVTRFLLGRVFPAHDTRTLDIGPALCREAIARAAGPNVSANDVETRLAEAG 112
Query: 282 DLGLVAKA-----------------SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
++G VA + D L + +V T R +A G S+
Sbjct: 113 EIGAVAAGYDFGGQRGLAAFGAGSTGGDGGTGSTGSDGLALVEVDATLRDLAAAEGDGSE 172
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA----AVYNEQ---- 376
+K + + L + E + L RL+ ++RIG+ E T+ A+ +A AV + +
Sbjct: 173 SRKLDTLFGLFNRCSSAEAKILARLVLGEMRIGVGEGTVRDAVAEAFLADAVADAEDCGD 232
Query: 377 -------------------HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGV 417
H P I +EA V++ V Y ++ +G+
Sbjct: 233 DTIGDEADEEDEGDNEEDAHDDEP--ILRADDEAVAAVERALQVTNDYGRVAVRARDEGL 290
Query: 418 WNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL--EDGS 475
L G P+ MLA+ ++ V F E E K+DG R Q+HY+ DG
Sbjct: 291 EGL-RAEGLAVGRPVQAMLAQAGT-ATDAVESFG--EVAVETKFDGARVQVHYVPETDGD 346
Query: 476 VE------IYSRNAERNTGKFPDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQ 528
+ +YSRN + T P++V V +R P +LD E+VA D + LPFQ
Sbjct: 347 GDTGLGPRLYSRNMDDVTDALPEIVEYVEARASSP----VILDGEVVAVD-DAGDPLPFQ 401
Query: 529 TLSTRARKNVSLSDIKVDVCI--YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ 586
+ R R+ + ++ +V + +AFD L+ +G LL E LRVR + L D + +
Sbjct: 402 EVLRRFRRKHDVDRMRDEVTLRLHAFDCLHADGDDLLDEPLRVRHDRLVDVLPDAAASLE 461
Query: 587 FATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIG 646
A + +I+ E + A+DA EG+++K ++TY P R +WLK K D
Sbjct: 462 VADSPDAIESAEAE-----ALDAGHEGVMLKNP--ESTYTPGNRGRDWLKRKPDV----- 509
Query: 647 DSLDLVPIAAFHGRGKRTGVYGAFLLACY-DSNNEEFQSICKIGTGFSEAMLEERSSSLR 705
++LD V + A G G+R ++G FLL ++ + F++I K+ TG ++ LE + L
Sbjct: 510 ETLDAVVVGAEWGEGRRAELFGTFLLGVRNEAAGDAFRTIGKVATGLTDEALEALTDRLE 569
Query: 706 SKVIPKPRPYYRFADTISPDVWFE 729
V+ + TI P+V E
Sbjct: 570 PHVVSETGTEI----TIRPEVVIE 589
>gi|322370364|ref|ZP_08044923.1| DNA ligase [Haladaptatus paucihalophilus DX253]
gi|320550072|gb|EFW91727.1| DNA ligase [Haladaptatus paucihalophilus DX253]
Length = 548
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 147/495 (29%), Positives = 232/495 (46%), Gaps = 59/495 (11%)
Query: 212 ITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES 271
I D V ++L + +DL + ++ PA + L IG A+A A G+ S
Sbjct: 22 IIDAVTDLL----SSANDDLEVLARFVQGRVFPAWDSTTLDIGPNLCYTAIARAAGQNVS 77
Query: 272 --HVKKQYQEMGDLGLVAK-----ASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
V+ + EMGD+G VA + + D LT+ +V +A G SQ
Sbjct: 78 ADDVEDRLAEMGDIGAVAASYEFGGQQGLAAFGGGRDELTVAEVATELDALATTEGSGSQ 137
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI 384
+ K + + L E +YL RL+ S++RIG+ E T+ A+ A
Sbjct: 138 DTKIDILFGLFNRTESLEARYLARLVLSEMRIGVGEGTVRDAISAA-------------F 184
Query: 385 QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVS 444
P+E V++ V Y ++ ++G L + G P+ MLA+
Sbjct: 185 DVPVES----VQRALQVSNDYGRVARVAESEGEDGLDD-LQLEVGRPVQAMLAQ----AG 235
Query: 445 EIVNKFQDMEFT-CEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKFPDVV-LAVSRLK 501
+ + +D E E+K+DG R Q+HY DG +V I+SRN E T P+VV A L
Sbjct: 236 AVTDALEDWEVAGVEWKFDGARVQLHY--DGETVRIFSRNMEDVTDPLPEVVEYAEENLA 293
Query: 502 KPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVCIYAFDILYRNG 559
P+ ++D E+VA D + LPFQ + R R+ +V+ + +V V + AFD L+ +G
Sbjct: 294 APA----IVDGEVVAMD--DGEPLPFQEVLRRFRRKHDVARAREEVAVELRAFDCLHADG 347
Query: 560 QPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM 619
+ LL L R + L G A T+T D DEI A+DA EG+++K
Sbjct: 348 EDLLTAPLVERHDRLQVIL---SGGVS-ALTVTG-DEDEIADIEANALDAGHEGIMLK-- 400
Query: 620 DRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNN 679
+ D+TY P +R NW K K D +++DLV A G G+R G FLL+ + +
Sbjct: 401 NPDSTYSPGRRGKNWRKRKPDV-----ETVDLVVTGAEWGEGRRASFLGTFLLSAR-TED 454
Query: 680 EEFQSICKIGTGFSE 694
+F+++ K+ TG ++
Sbjct: 455 GDFETLGKVATGITD 469
>gi|399574441|ref|ZP_10768200.1| DNA ligase [Halogranum salarium B-1]
gi|399240273|gb|EJN61198.1| DNA ligase [Halogranum salarium B-1]
Length = 590
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 151/558 (27%), Positives = 259/558 (46%), Gaps = 51/558 (9%)
Query: 219 MLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR--TESHVKKQ 276
++R + ++L V ++ PA + L IG + +A+A A G+ T + V+++
Sbjct: 25 LVRDLFAAASDNLSVVARFVQGRVFPAWDSTTLDIGPSLCYEAIARAAGQNVTAAAVEER 84
Query: 277 YQEMGDLGLVAK-----ASRSSQSMMRKPDP-LTITKVFDTFRLIAKEAGKDSQEKKKNR 330
EMG++G VA R + LT+ +V + R +A +G SQ++K +
Sbjct: 85 LAEMGEIGDVAASFDFGGQRGLAAFGSGGQSNLTVEEVDEELRALAAASGSGSQDRKLDT 144
Query: 331 IKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA-------AVYNEQHSKPPPN 383
+ L + E +YL RL+ +++RIG+ E T+ A+ +A A
Sbjct: 145 LFGLFNRCSPAEARYLARLVLAEMRIGVGEGTVRDAIAEAFLADAADAAAVRDDDADDGQ 204
Query: 384 IQSPLEE---AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPT 440
+ + E A + V++ V Y ++ +G L + G P+ MLA+
Sbjct: 205 VTAARERRDTAIETVERALQVSNDYGRVAVIARDEGETGL-DAVQLEVGRPVQAMLAQAG 263
Query: 441 KGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS---------VEIYSRNAERNTGKFP 491
V + ++ + D+ E K+DG R Q+HY DG V ++SRN E T P
Sbjct: 264 T-VLDALDAWGDV--AVETKFDGARVQVHY--DGGSENGEGDTDVSLFSRNMEDVTDALP 318
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCI 549
+VV V R V +LD E+VA D + LPFQ + R R+ + ++ V V +
Sbjct: 319 EVVEFVEREVDVPV---ILDGEVVAVDDDGSP-LPFQEILRRFRRKHDVGRMRDEVTVEL 374
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
AFD L+ +G LL E + R + L E + L + D ++I+ + A+DA
Sbjct: 375 RAFDCLHADGDDLLAESVADRHDRLTGLLGETGA---VSNLLLTDDAEKIEAYEAEALDA 431
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EG+++K + DA Y P KR NWLK K D ++LDLV A G G+R G
Sbjct: 432 GHEGIMLK--NPDAPYSPGKRGKNWLKRKPDV-----ETLDLVVTGAEWGEGRRATFLGT 484
Query: 670 FLLACY--DSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVW 727
FL++ +S + EF+++ K+ TG ++ L E + L ++ + T +V
Sbjct: 485 FLVSARVEESEDAEFRTLGKVATGITDERLAELTERLEPDIVAESGTQVDLRPTTVFEVG 544
Query: 728 FEPTERPETSNSPASIVY 745
+E ++ T +S ++ +
Sbjct: 545 YEEIQQSPTYSSGYALRF 562
>gi|336122247|ref|YP_004577022.1| DNA ligase [Methanothermococcus okinawensis IH1]
gi|334856768|gb|AEH07244.1| DNA ligase [Methanothermococcus okinawensis IH1]
Length = 580
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 150/527 (28%), Positives = 254/527 (48%), Gaps = 52/527 (9%)
Query: 199 VFDMISNETGRILITDIVCNMLR-TVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDAS 257
+F+ I + T R+ D +++ T + + EDL + Y+ ++ +E ELGIG +
Sbjct: 9 IFNKIESTTKRLEKMDYFIELIKLTNKKGSAEDLKKICYITIGRVFAEYENKELGIGPSL 68
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLGL-VAKASRSSQSMMRKPDPLTITKVFDTFRLIA 316
+I+A+ + G E + +E GD+G+ V K S + + P T+ ++DT + I+
Sbjct: 69 LIEAV-KTIGIDEKKLLNTIKETGDMGMAVEKLSSDIKQISLFQTPPTLDDIYDTLKKIS 127
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
+ G +SQ+KK I +LL+ A+ E +Y++RL+ +RIG+ T+L A +VY
Sbjct: 128 EIEGANSQKKKIRHISSLLLKASPLERRYIVRLILEDMRIGMNVPTILGAF---SVY--- 181
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
P E+ KI V + + EK++ + D +L PI PML
Sbjct: 182 -------FNIPKEKLEKIYAVVNDIGLIAEKLMLNVDIDNDEDL----KLRIFRPIKPML 230
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
A+ + + + + +F E KYDG R QIH ++ V+IYSR E T P++
Sbjct: 231 AQLIPSIDDAIIEMGAPQF--ETKYDGARVQIHK-KNKDVKIYSRKLEDITNSIPEI--- 284
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDI 554
V +K V + +++ E VA D + PFQ + R R+ + +K +++ +Y FDI
Sbjct: 285 VEEVKNMDVNNIIVEGECVAIDLKTGHPRPFQDILRRFRRKYDIDKMKEEINLRVYLFDI 344
Query: 555 LYRNGQPLLQEQLRVRR---EHLYDSFEEEPGFFQFATTLTS---IDL------DEIQK- 601
LY N +PL+ L+ RR E++ + + E + + S ID+ D I+K
Sbjct: 345 LYYN-KPLIDLPLKERREILENIVGTNDWEKDKIKIENEIKSKKKIDISYKLTTDNIKKA 403
Query: 602 --FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
F ++ EG++IK + +A Y P R K K +SLD+V A G
Sbjct: 404 LEFYKWSLSIGHEGVMIK--NPNAPYTPGSRVKTMYKFKPTL-----ESLDVVITKAKIG 456
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRS 706
GKR YG+F ++ D + I +G+G SE L + + + S
Sbjct: 457 MGKRKDWYGSFEISVRDEEGNLY-PIGHVGSGLSEEELGKLTEMINS 502
>gi|448609022|ref|ZP_21660301.1| DNA ligase (ATP) [Haloferax mucosum ATCC BAA-1512]
gi|445747399|gb|ELZ98855.1| DNA ligase (ATP) [Haloferax mucosum ATCC BAA-1512]
Length = 585
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 236/507 (46%), Gaps = 48/507 (9%)
Query: 211 LITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTE 270
L+ D+ C+ +DL V ++ PA + L IG +A+A A G
Sbjct: 25 LLADLFCD--------ADDDLPTVARFVQGRVFPAWDSTTLDIGPRLCHEAIARAAGTNV 76
Query: 271 S--HVKKQYQEMGDLGLVAK-----ASRSSQSMMRKP-DPLTITKVFDTFRLIAKEAGKD 322
S V+ + + G++G VA R + + LT+ +V R +A +G
Sbjct: 77 SADDVETRLADRGEIGAVAASYDFGGQRGLAAFGAGGRETLTVAEVDSELRALAAASGSG 136
Query: 323 SQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH----- 377
S+E K + L E ++L RL+ S++RIG+ E T+ A+ +A + +
Sbjct: 137 SEETKLKTLYGLFNRTDSDEARFLARLVLSEMRIGVGEGTVRDAIAEAFLVTDADAAAIR 196
Query: 378 -----SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
S+ + +EA V + V Y +V + D + + G P+
Sbjct: 197 DDDADSETETAARDRRDEAIAAVARALQVSNDY-GMVAEVTRDEAESGLDEVRLEVGRPV 255
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
MLA+ ++ +++++ E K+DG R Q+H ++G V ++SRN E TG P+
Sbjct: 256 QAMLAQAGT-AADALDEWETA--AVETKFDGARVQVHRDDEGDVSLFSRNMEDVTGALPE 312
Query: 493 VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIY 550
VV V+ V +LD E+VA D + + LPFQ + R R+ + ++ V V +
Sbjct: 313 VVEFVADAVDEPV---ILDGEVVAMDDDGEP-LPFQEILRRFRRKHDVGRMREEVRVELR 368
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
AFD L+ G LL E L R + L + + L + D DEI + A+++
Sbjct: 369 AFDCLHAAGDDLLNEPLTTRHDRLSTVLGSDSD--AVSDLLLTDDPDEIAAYESDALESG 426
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
EG+++K + +ATY P R +WLK K D ++LDLV A G G+R G F
Sbjct: 427 HEGIMLK--NPEATYSPGDRGKHWLKRKPDV-----ETLDLVVTGAEWGEGRRAKYLGTF 479
Query: 671 LLACY---DSNNEEFQSICKIGTGFSE 694
LL+ +S+++EF++I K+ TG ++
Sbjct: 480 LLSARVESESDDDEFETIGKVATGITD 506
>gi|150399047|ref|YP_001322814.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus vannielii SB]
gi|224487892|sp|A6UNY0.1|DNLI_METVS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|150011750|gb|ABR54202.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus vannielii SB]
Length = 573
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 139/489 (28%), Positives = 236/489 (48%), Gaps = 51/489 (10%)
Query: 228 PEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGL-V 286
PE+L + ++ ++ +E E+GIG +I+A+ + G +E+ + + +E GD+G+ V
Sbjct: 39 PENLKEICQVSIGRVFAEYENREIGIGPNLLIEAI-KTTGISENDLNLKIKETGDIGISV 97
Query: 287 AKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYL 346
S + + +PLT +V+ T + ++ G SQ+KK I LL+ A E +Y+
Sbjct: 98 EHLSSKIKQISLFNEPLTFEEVYSTIKKLSTIEGTSSQKKKIRIISNLLIIANPIESRYI 157
Query: 347 IRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYE 406
RL+ +RIG+ T+LAA ++ +++V++V
Sbjct: 158 SRLILEDMRIGMNIPTILAAFSNYFGIEKEK-----------------IEKVYAVTNDIG 200
Query: 407 KIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERA 466
I LL + + + T PI PMLA+ T + E V + ++ +F E KYDG R
Sbjct: 201 LIGKKLLENSNFEEDPELNLTVFRPIKPMLAQLTPSIEEAVIEMKNPQF--ETKYDGARV 258
Query: 467 QIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP 526
Q+H +G V+IYSR E T P++VL + L+ V + +L+ E VA + E K P
Sbjct: 259 QVHK-SNGEVKIYSRRLEDITNSVPELVLEIKNLE---VDNVILEGECVAMNLENGKPRP 314
Query: 527 FQTLSTRARKNVSLSDI--KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF------ 578
FQ + R R+ + + +V + IY FDILY N + L+ L RR L + F
Sbjct: 315 FQDILRRFRRKYDIDKMTEEVSLRIYFFDILYHN-KGLIDLPLFERRNILENIFGTNNWD 373
Query: 579 ------EEEPGFFQFATT---LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSK 629
E E + T ++S DL ++F ++ EG+++K + +A Y P
Sbjct: 374 LELKKIENEIKSNKMLFTSFKVSSTDLKIAKEFFKWSLSIGHEGIMVKNL--NAIYTPGS 431
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
R K+K+ ++LD+V A G GKR YG++ ++ ++E I +G
Sbjct: 432 RVKTMCKIKQTL-----ENLDVVVTRAKIGMGKRKDWYGSYEISV-KGDDESLHVIGNVG 485
Query: 690 TGFSEAMLE 698
+G +E LE
Sbjct: 486 SGLTEEDLE 494
>gi|71985278|ref|NP_741626.2| Protein LIG-1, isoform b [Caenorhabditis elegans]
gi|54110913|emb|CAD44112.2| Protein LIG-1, isoform b [Caenorhabditis elegans]
Length = 210
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 120/186 (64%), Gaps = 1/186 (0%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W KG +VP+ +L + I +G+ + D + V++ +P+DL VY++ N++ P
Sbjct: 13 WAKGSKVPYKEFALTLEKIEELSGKKKV-DELAQFFTKVLDFSPDDLTACVYMSVNQLGP 71
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
++EGLELG+ + S+IKA+A+A GRTE +K+ + GDLG VA+ SRS+Q M+ P LT
Sbjct: 72 SYEGLELGVAENSLIKAVAKATGRTEGKIKEDLRAKGDLGTVAQQSRSNQKMLAVPKALT 131
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ VF+ IAK +G + KK + I ALL+A E ++L+R+L K+RIGL EQ++L
Sbjct: 132 VPTVFNKLTEIAKLSGTSAMNKKVDAISALLIACQGIEARFLVRMLAGKMRIGLGEQSVL 191
Query: 365 AALGQA 370
+ALG A
Sbjct: 192 SALGHA 197
>gi|336476807|ref|YP_004615948.1| ATP-dependent DNA ligase I [Methanosalsum zhilinae DSM 4017]
gi|335930188|gb|AEH60729.1| DNA ligase I, ATP-dependent Dnl1 [Methanosalsum zhilinae DSM 4017]
Length = 561
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 240/541 (44%), Gaps = 45/541 (8%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I N + + ITD+V R V E+L V++ ++ PA ELGIG +L
Sbjct: 14 IENTSSSLEITDMVAEFFRIV---DTEELPVVIHFIMGEVFPAWSEEELGIGKGLYYTSL 70
Query: 263 AEACGRTESHVKKQYQEMGDLGL----VAKASRSSQS----MMRKPDPLTITKVFDTFRL 314
++ G + +K+ ++ GD+G V K Q L+I V++ +
Sbjct: 71 SKVSGLSVDEIKEIVRKTGDIGKTTIEVMKNKSGDQVTFSVFFDDNTQLSIIDVYEALKK 130
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
IA GK SQ K ++ + A+ E QY+ RL+ +LRIG+ E + A+ A
Sbjct: 131 IAAINGKGSQNIKMKNLQYIFSKASPQESQYMARLVLEELRIGVGEGIVRDAIALA---- 186
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
+ A+ +++ F + + A G+ + + PI
Sbjct: 187 -------------FDVPAESIERGFMLTNDMGAVGLAAKKGGIEEVEK-LNMELNRPIKL 232
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLA+ T + + E E+K+DG R Q+H +D V IYSR E T PDVV
Sbjct: 233 MLAQVTPSIK--TAIEEMEEAAIEWKFDGARLQVHKDKD-KVSIYSRKLENITNSLPDVV 289
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVCIYAF 552
AV + + +LD E A D E K PFQ + R R+ ++ ++ + + + F
Sbjct: 290 SAVKEY--VNADTAILDGEAFAVD-ENGKPKPFQEILKRLRRKYDIEITTRDIPLTVKFF 346
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCE 612
DI+Y NG L+ L RR L + +T D + +K A+ A E
Sbjct: 347 DIMYLNGDYLIDLSLIERRRLLGECVRNSNSITVDQQVVTD-DPEIGEKIYSEAIRAGHE 405
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
G++IK + + Y P KR NWLK K + ++LDLV I G G+RT G++ L
Sbjct: 406 GIMIK--NPQSPYTPGKRGKNWLKKK-----PVMETLDLVVIGGEWGYGRRTNFIGSYTL 458
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTE 732
+CYD ++ F I K+GTG ++ L E + ++ + F I +V FE +
Sbjct: 459 SCYDPDSGNFLPIGKVGTGITDENLVELTGLFSDLIVVESGRDLEFKPEIVFEVAFEEIQ 518
Query: 733 R 733
+
Sbjct: 519 K 519
>gi|448529713|ref|ZP_21620661.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum hochstenium ATCC
700873]
gi|445708230|gb|ELZ60071.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum hochstenium ATCC
700873]
Length = 639
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 146/548 (26%), Positives = 238/548 (43%), Gaps = 79/548 (14%)
Query: 240 NKIAPAHEGLELGIGDASIIKALAEACG--RTESHVKKQYQEMGDLGLVAKA-----SRS 292
++ PAH+ L IG A +A+A A G + S V+ + E G++G VA A R
Sbjct: 69 GRVFPAHDTRTLDIGPALCREAIARAAGPNVSASDVEDRLAERGEIGSVAAAYDLGGQRG 128
Query: 293 SQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQS 352
+ D LT+ V + R +A E+G S+ +K++ + L + E +L RL+
Sbjct: 129 LAAFGGGRDALTVAAVDEALRDLAAESGDGSESRKRDALFGLFTRCSPSEAAFLARLVLG 188
Query: 353 KLRIGLAEQTLLAALGQAAVY------NEQHSKPPPNIQSPLE---------------EA 391
++R+G+ E T+ A+ +A + E P + + E EA
Sbjct: 189 EMRLGVGEGTIRDAVAEAFLAPDPERDGEGDDAPDADGEDAFEAADSESNDLALRASDEA 248
Query: 392 AKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ 451
V++ V Y ++ +G L S G P+ MLA+ ++ V+ F
Sbjct: 249 IAAVERALQVTNDYGRVAVRARDEGTEGL-RAESLRVGRPVQAMLAQAGT-ATDAVDSFG 306
Query: 452 DMEFTCEYKYDGERAQIHYLEDGSV---------EIYSRNAERNTGKFPDVVLAVS-RLK 501
E E K+DG R Q+HY DG +YSRN + T P++V V+ R+
Sbjct: 307 --EVAVETKFDGARVQVHYAPDGGNSGDGEGLGPRLYSRNMDDVTEALPEIVEYVADRVD 364
Query: 502 KPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDILYRNG 559
P +LD E+VA D + LPFQ + R R+ + ++ V + ++AFD L+ +G
Sbjct: 365 VP----VILDGEVVAVD-DAGDPLPFQEVLRRFRRKHDVDRMRETVSLRLHAFDCLHADG 419
Query: 560 QPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM 619
LL E LRVR + L + A +I E A+DA EG+++K
Sbjct: 420 DDLLDESLRVRHDRLRAVLGDAAADLALADDPDAIAAAERD-----ALDAGHEGVMLKNP 474
Query: 620 DRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNN 679
+A Y P R +WLK K D ++LD V + A G G+R ++G FLLA D
Sbjct: 475 --EAAYTPGDRGRDWLKRKPDV-----ETLDAVVVGAEWGEGRRAELFGTFLLAVRDEGG 527
Query: 680 E------------------EFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT 721
+ ++ K+ TG ++ L + + L V+ + F
Sbjct: 528 AGDAPDRDDPDDAADLVPPGYATVGKVATGITDEALADLTERLEPHVVGESGTTVAFDPE 587
Query: 722 ISPDVWFE 729
+ +V +E
Sbjct: 588 LVVEVGYE 595
>gi|448585469|ref|ZP_21647862.1| DNA ligase, ATP dependent [Haloferax gibbonsii ATCC 33959]
gi|445726169|gb|ELZ77786.1| DNA ligase, ATP dependent [Haloferax gibbonsii ATCC 33959]
Length = 585
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 150/537 (27%), Positives = 242/537 (45%), Gaps = 44/537 (8%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHV 273
V ++L + +DL V ++ PA + L IG +A+A A G + V
Sbjct: 22 VVSLLSDLFSDAGDDLPTVARFVQGRVFPAWDSTTLDIGPRLCHEAIARAAGPNVSADDV 81
Query: 274 KKQYQEMGDLGLVAKA-SRSSQSMMRK-----PDPLTITKVFDTFRLIAKEAGKDSQEKK 327
+ + + G++G VA + Q + D LT+ +V R +A +G S+E K
Sbjct: 82 EDRLADRGEIGAVAASYDFGGQRGLAAFGSGGQDGLTVAEVDSELRALAAASGSGSEETK 141
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI--- 384
+ L E + L RL+ S++RIG+ E + A+ +A + + + +
Sbjct: 142 LKTLYGLFNRTDPDEARILARLVLSEMRIGVGEGAVRDAVAEAFLVDPADAAAIRDDDAD 201
Query: 385 -------QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
+ EA V + V Y + +G L + G P+ MLA
Sbjct: 202 AETEAAARDRRNEAVAAVARALQVSNDYGMVAELARDEGEAGL-DGVRLEVGRPVQAMLA 260
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ ++ ++++ E K+DG R Q+H DG V ++SRN E TG P+VV V
Sbjct: 261 QAGT-AADALDEWD--AAAVETKFDGARVQVHRDADGEVSLFSRNMEDVTGALPEVVEFV 317
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDIL 555
+ SV +LD E+VA D + + LPFQ + R R+ + ++ V V + AFD L
Sbjct: 318 ADAVDESV---ILDGEVVAMDDDGEP-LPFQEILRRFRRKHDVGRMREEVRVELRAFDCL 373
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLI 615
+ G LL + L R + L ++ + L + D DEI + A+DA EG++
Sbjct: 374 HAGGDDLLTDPLSDRHDRLAAVLGDDSA--AVSDLLLTDDADEIAAYEADALDAGHEGIM 431
Query: 616 IKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLAC- 674
+K DA Y P R NWLK K D ++LDLV A G G+R G FLL+
Sbjct: 432 LKNP--DAPYSPGDRGKNWLKRKPDV-----ETLDLVVTGAEWGEGRRAEFLGTFLLSAR 484
Query: 675 --YDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
+S ++ F++I K+ TG ++ L E + L ++ R + D I P V FE
Sbjct: 485 VEAESGDDAFETIGKVATGITDEELVELTDLLEPEI---ERESGKEVD-IRPSVVFE 537
>gi|429190348|ref|YP_007176026.1| ATP-dependent DNA ligase I [Natronobacterium gregoryi SP2]
gi|448326260|ref|ZP_21515627.1| DNA ligase [Natronobacterium gregoryi SP2]
gi|429134566|gb|AFZ71577.1| ATP-dependent DNA ligase I [Natronobacterium gregoryi SP2]
gi|445612917|gb|ELY66634.1| DNA ligase [Natronobacterium gregoryi SP2]
Length = 573
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 241/520 (46%), Gaps = 58/520 (11%)
Query: 212 ITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRT-- 269
+ D++ + P + V ++ PA + L IG ++ +A++ A GR
Sbjct: 26 VQDLLADTDGDAESGEPRTIEIVARFVQGRVFPAWDSTTLDIGPSACYEAISRAAGRNVD 85
Query: 270 ESHVKKQYQEMGDLGLVAKASR--SSQSM-----MRKPDPLTITKVFDTFRLIAKEAGKD 322
+ V+ + ++G++G VA + Q + LT+ +V+D +A G+
Sbjct: 86 TNDVEDRLADVGEIGEVAASYEFGGQQGLDAFGAGNGSGALTVREVYDDLVALAAAEGEG 145
Query: 323 SQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP 382
S+++K + + L + E +YL RL+ S++RIG+ E T+ A+ A ++H +
Sbjct: 146 SEDRKIDALFGLFNRCSSDEARYLARLVLSEMRIGVGEGTVRDAIAAAFDIPQEHVERAL 205
Query: 383 NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKG 442
+ + E A++ + +G+ L + + G P+ MLA+ T
Sbjct: 206 QVSNDYGEVARVARD-----------------EGLDGL-DAMALEVGRPVQAMLAQ-TGT 246
Query: 443 VSEIVNKFQDMEFTCEYKYDGERAQIHY----LE--DGSVEIYSRNAERNTGKFPDVV-L 495
V++ + ++ E E+KYDG R Q+HY LE DG+ ++SRN E T P+VV
Sbjct: 247 VTDALEAWE--EAAVEWKYDGARIQLHYDPDGLEEGDGTTRVFSRNMEDVTAALPEVVEF 304
Query: 496 AVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFD 553
A L P +LD E+VA D + LPFQ + R R+ ++ + DV + FD
Sbjct: 305 AEKTLAVP----VILDGEVVAVD-DAGDPLPFQEVLKRFRRKHDVAKAREDVAVRPVCFD 359
Query: 554 ILYRNGQPLLQEQLRVRREHLY-----DSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVD 608
L+ +G LL+E L R E L D E+ LT D DEI+ A++
Sbjct: 360 CLHADGVDLLEEPLTTRHERLEVVLTGDGRPEDVAGLSL-LWLTD-DPDEIESIDAEALE 417
Query: 609 ASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
+ EG+++K + ++ Y P +R NW K K D ++LD V A G G+R G
Sbjct: 418 SGHEGIMLK--NPESAYSPGRRGKNWRKRKPDV-----ETLDCVVTGAEWGEGRRATFLG 470
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
F L+ + E +++ K+ TG ++ L E + L +
Sbjct: 471 TFELSVRNETTGELETVGKVATGITDEQLAELTELLEPHI 510
>gi|159479866|ref|XP_001698007.1| hypothetical protein CHLREDRAFT_176829 [Chlamydomonas reinhardtii]
gi|158273806|gb|EDO99592.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1384
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 143/264 (54%), Gaps = 17/264 (6%)
Query: 192 PFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPE---DLVPVVYLAANKIAPAHEG 248
P++ ++L +S+ T R+ I+D + NM R+V+ + DLV +YL +IAP ++
Sbjct: 618 PYLHVALCLSALSSTTKRLAISDALTNMFRSVLAAADDPGRDLVAALYLVTGRIAPEYDK 677
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
EL +G A++ AL A G + + +K+ Y+E GDLG VA A R +QS +R P PL ++
Sbjct: 678 TELNVGGATVSGALQAATGASAARLKQLYREHGDLGDVAAACRRTQSTLRNPAPLLCGRL 737
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
R +A + G+ +++ + LL A D E ++L+R L S LR+G +++LA LG
Sbjct: 738 LAALRDVAADKGQGVAARRQAVVLGLLRACRDVEVRFLVRTLISNLRVGANWRSVLAPLG 797
Query: 369 QAAVYNEQHSKPP----------PNIQSP----LEEAAKIVKQVFSVLPVYEKIVPALLT 414
+A + +++ + +QSP LE A V + + P +E +VP LL
Sbjct: 798 RAVLLHQRATAAVAAAADGSATTAAVQSPAPAELEAAGAAVLEAYHTCPNFEILVPVLLR 857
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAK 438
G+ L C T G+P+ PMLA
Sbjct: 858 HGIEGLRTRCGLTLGVPLKPMLAN 881
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 85/141 (60%), Gaps = 9/141 (6%)
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLK-------LKKDYIESIGDSLDL 651
+ L + + EGL++K +D + YEPS+RS W+K +K+DY E + DS+D+
Sbjct: 1085 VMDMLLQSFNTGAEGLMLKRLDGASAYEPSRRSEAWIKASSECVCVKRDYCEGLRDSVDV 1144
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
VPI A++G+G++ + FLLA +D EEFQS+C+ +GFS+ L + +IP
Sbjct: 1145 VPIGAWYGQGRKVKWFSPFLLAVWDPVREEFQSLCRCMSGFSDQFYAAAKERLGATIIPG 1204
Query: 712 PRPYYRFADTISPDVWFEPTE 732
P+PYY + S VWFEPTE
Sbjct: 1205 PKPYYNTGERCS--VWFEPTE 1223
>gi|193083993|gb|ACF09668.1| DNA ligase I ATP-dependent Dnl1 [uncultured marine crenarchaeote
AD1000-56-E4]
Length = 353
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 189/370 (51%), Gaps = 32/370 (8%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGLEL 251
F +S +F+M+ T RI +T+I+ +L+ TP+ ++P +VYL I P EG+EL
Sbjct: 3 FSIISEMFEMMEKTTKRIELTNILVELLKK----TPKKIIPNIVYLLQGIIRPNFEGVEL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMR-KPDPLTITKVFD 310
GI + I+A++++ G ++ Y+E GDLGL A ++ + +T+ +V++
Sbjct: 59 GIAEKLAIRAISKSAGLPIKKIEDDYREGGDLGLTASNILKIKTQTTFTAEKITVERVYE 118
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
T IAK GK SQ+ K I +LL AT E ++++++L LR+G+AE T++ AL A
Sbjct: 119 TLFKIAKLEGKGSQDLKMKYISSLLNDATPLEAKFVLKILLGTLRLGIAENTVMDALAIA 178
Query: 371 AV---YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
N + N+ S L + + IV TDG+ + +
Sbjct: 179 FTGKKENRVQIENAYNVSSDLGKVSLIVA-----------------TDGIDEIKK-FKIS 220
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNT 487
PI PMLA + +++ K + +F EYK DGER QIH D V ++SR E T
Sbjct: 221 LFSPIRPMLADRVQSEKDVIKKMPE-QFVAEYKLDGERVQIHMQSDKIV-LFSRRLENIT 278
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN-VSLSDIKVD 546
+PD+V + K +V V + EIV + + LPFQ L R RK+ + + ++
Sbjct: 279 QYYPDIVERIG--KTLNVNEGVFEAEIVPINENTGEFLPFQELMHRRRKHKLDETVLQYP 336
Query: 547 VCIYAFDILY 556
+ + FD+LY
Sbjct: 337 ITVNFFDVLY 346
>gi|448305598|ref|ZP_21495528.1| ATP-dependent DNA ligase I [Natronorubrum sulfidifaciens JCM 14089]
gi|445588368|gb|ELY42612.1| ATP-dependent DNA ligase I [Natronorubrum sulfidifaciens JCM 14089]
Length = 563
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 235/517 (45%), Gaps = 56/517 (10%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES--HV 273
+ +R ++E +DL V ++ PA + L IG + +A+A A G S V
Sbjct: 22 IVAHVRELLEDAGDDLEIVARFVQGRVFPAWQSRTLDIGPNTCYEAIARAAGTNVSADDV 81
Query: 274 KKQYQEMGDLGLVAKA-------SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEK 326
+++ E+G++G VA + + + LT+ + F+T +A G S +
Sbjct: 82 EERLAEVGEIGEVAAGYDFGGQQGLGAFTAGGASETLTVREGFETLSELAAAEGAGSHDT 141
Query: 327 KKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQS 386
K + + L E +YL RL+ S++RIG+ E + A+ +A
Sbjct: 142 KVDLLFGLFNRCESVEARYLARLVLSEMRIGVGEGAVRDAISEA-------------FDV 188
Query: 387 PLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEI 446
P E V++ V Y ++ DG+ L + G P+ MLA+ V++
Sbjct: 189 PGER----VERALQVSNDYGQVARVARDDGLEGL-DAMDLEVGRPVQAMLAQAGT-VTDA 242
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLEDGS----VEIYSRNAERNTGKFPDVV-LAVSRLK 501
+ ++ E E+KYDG R Q+H+ +G+ ++SRN E T P+VV A L
Sbjct: 243 LEEWD--EAAVEWKYDGARVQLHHDPNGTDAAETRVFSRNMEDVTDALPEVVEFAEETLA 300
Query: 502 KPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILYRNG 559
+P+ +LD E+VA D + LPFQ + R R+ ++ + DV + FD L+ G
Sbjct: 301 EPA----ILDGEVVAVDDDGAP-LPFQEVLKRFRRKHDVAKAREDVEVRPVFFDCLHAGG 355
Query: 560 QPLLQEQLRVRREH----LYDSFEEEPGFFQFATTLTSIDLDEIQKFLD-AAVDASCEGL 614
LL E L R E L D +EP + D E + +D A++A EG+
Sbjct: 356 DDLLAESLTTRHERLEALLADDPNQEPAAVDGLSLCWHTDDPETIELIDNDALEAGHEGI 415
Query: 615 IIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLAC 674
++K D D+TY P +R +W K K D ++LD + A G G+R G F LA
Sbjct: 416 MLK--DPDSTYSPGRRGKHWRKRKPDV-----ETLDCIVTGAEWGEGRRATFLGTFELAV 468
Query: 675 YDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
+E +++ K+ TG ++ LEE + L + +
Sbjct: 469 --RAGDELETVGKVATGITDETLEELTDLLEPHITAE 503
>gi|448410252|ref|ZP_21575117.1| DNA ligase [Halosimplex carlsbadense 2-9-1]
gi|445671948|gb|ELZ24527.1| DNA ligase [Halosimplex carlsbadense 2-9-1]
Length = 560
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 148/526 (28%), Positives = 245/526 (46%), Gaps = 61/526 (11%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I E+ I + V ++L + DL V ++ PAH+ +L IG A +A+
Sbjct: 13 IEAESADTAIVEGVTDLL----DAAGADLPVVARYVQGRVFPAHDSTKLDIGPALCYEAI 68
Query: 263 AEACGR--TESHVKKQYQEMGDLGLVAKA-------------SRSSQSMMRKPDPLTITK 307
A+A GR T V+ + ++GD+G VA + + + D LT+ +
Sbjct: 69 AKAAGRNVTVDDVEDRVADVGDVGAVASSYDFGGQQGLAAFGAGAGAGDGDGGDGLTVAE 128
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
V R +A G S + K++ + L A D E +YL RL+ S++RIG+ + T+ A+
Sbjct: 129 VDAELRDLAAADGSGSHDTKRDILFGLFNRAGDDEARYLARLVLSEMRIGVGDGTVRDAI 188
Query: 368 GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
+A P+E V++ V + ++ +G+ L +
Sbjct: 189 AEA-------------FDVPVE----AVERALQVTNDHGEVALVARDEGIDGL-ESLGLE 230
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG-SVEIYSRNAERN 486
G P+G MLA+ VS+ +++++ + E K+DG R Q+H+ DG ++SRN E
Sbjct: 231 VGRPVGAMLAQAGT-VSDALDEWESV--AVETKFDGARVQVHH--DGEETALFSRNMEDV 285
Query: 487 TGKFPDVVLAVSR-LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV 545
T P+VV V+ L P+ +LD E+VA + LPFQ + R R+ ++ +
Sbjct: 286 TDPLPEVVAFVADALDGPA----ILDGEVVAV-ADDGSPLPFQEILRRFRRKHDVAKARE 340
Query: 546 DVCI--YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFL 603
DV + AFD L+ +G LL E L R + L D+ + A T+T D +EI
Sbjct: 341 DVTVEFRAFDCLHADGDDLLDEPLTERHDRLADALGDAGAGALSALTVTE-DAEEIADIE 399
Query: 604 DAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
A+DA EG+++K ++ Y P +R WLK K D ++LDLV A G G+R
Sbjct: 400 AEALDADHEGIMLKNP--ESAYTPGRRGKQWLKRKPDV-----ETLDLVVTGAEWGEGRR 452
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
+ G F +A + F + K+ TG ++ L + L V+
Sbjct: 453 AELLGTFEVAA--PTDGGFAPLGKVATGITDEELAGLTDLLEPHVL 496
>gi|326498483|dbj|BAJ98669.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 937
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 205/430 (47%), Gaps = 41/430 (9%)
Query: 278 QEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKK-NRIKALLV 336
+E GD+ A S + KP P TI +D + E GK ++E+ + ++ +
Sbjct: 277 EECGDVAETI-AEFYSTTAHVKPPPKTILSNYDVDHYL-HELGKVTREQDQIQLLRKITE 334
Query: 337 AATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPN-IQSPLEEAAKIV 395
+T + + IRL+Q L+I + ++ +LG A + Q + + I+ LE +
Sbjct: 335 KSTVNDLRMFIRLVQKDLKINAGPKHIIESLGSNAYESFQATNDLKSFIKRYLEHKTSV- 393
Query: 396 KQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEF 455
Q + L I L+T P+ PMLA+P K V + K F
Sbjct: 394 -QNGTQLSKKLSIRIELMT----------------PVHPMLAEPCKSV-DFAFKRCPKGF 435
Query: 456 TCEYKYDGERAQIHYLEDGSVEIYSRN----AERNTGKFPDVVLAVSRLKKPSVRSFVLD 511
E KYDGER Q+H + + +SR+ E + V+ P S +LD
Sbjct: 436 YAEIKYDGERLQLHKDKTNQFKFFSRSLKPVTEHKIHQLSQYVVQAF----PKGESMILD 491
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
EI+ DR+ +K LPF TL +K S + + + FD LY NG+ LL + L+ RR
Sbjct: 492 GEILLVDRKTKKPLPFGTLGVHKKKEFS----EANEAFFIFDCLYYNGESLLHKTLKERR 547
Query: 572 EHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRS 631
E L + T ++++ ++ + EGL++K + D YEP+KR
Sbjct: 548 EILVHHMTPIENRIVLSDLKTINKKNDLKHLINFTIAEGLEGLVLK--NPDGAYEPNKR- 604
Query: 632 LNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIG 689
+WLK+KKDY+ ++ D+ DLV + A++G GK+ G+ FLL C+D ++ + ++ K G
Sbjct: 605 -HWLKVKKDYLMEGTMADTADLVVLGAYYGTGKKGGLMSVFLLGCHDPESDRWYTVAKCG 663
Query: 690 TGFSEAMLEE 699
GF +A LE+
Sbjct: 664 NGFDDATLEK 673
>gi|448369528|ref|ZP_21556080.1| ATP-dependent DNA ligase I [Natrialba aegyptia DSM 13077]
gi|445650703|gb|ELZ03619.1| ATP-dependent DNA ligase I [Natrialba aegyptia DSM 13077]
Length = 565
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 222/503 (44%), Gaps = 59/503 (11%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRT--ESHV 273
+ +R + E +DL V ++ PA + L IG + +A+A A G V
Sbjct: 22 IVAHVRDLFEDAGDDLPVVARFVQGRVFPAWDSTTLDIGPNTCYEAIARAAGTNVAADDV 81
Query: 274 KKQYQEMGDLGLVAKA------------SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGK 321
+++ E G++G VA + + D LT+ +V DT +A G
Sbjct: 82 EERLAERGEIGDVAASYDFGGQQGLGAFTGGGGDSTGSGDDLTVREVDDTLTELAAAEGA 141
Query: 322 DSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPP 381
SQ++K + + L + E +YL RL+ S++RIG+ E T+ A+ +A E
Sbjct: 142 GSQDRKVDLLFGLFNRCSSSEARYLARLVLSEMRIGVGEGTVRDAIAEAFEVPEDR---- 197
Query: 382 PNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTK 441
V++ V Y ++ +GV L + G P+ MLA+
Sbjct: 198 -------------VERALQVSNDYGQVAQVARDEGVSGL-DGIELELGRPVQAMLAQAGT 243
Query: 442 GVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV-LAVSRL 500
V++ + ++ E E+KYDG R Q+H+ G ++SRN E T P+VV A L
Sbjct: 244 -VTDALEEWD--EAGVEWKYDGARIQLHHDPGGQTRVFSRNMEEVTDALPEVVEFAAETL 300
Query: 501 KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILYRN 558
+P +LD E+VA D E LPFQ + R R+ ++ + DV + FD L+
Sbjct: 301 DEP----VILDGEVVAID-EDGSPLPFQEVLKRFRRKHDVAKAREDVSVRPVFFDCLHAG 355
Query: 559 GQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL-------DEIQKFLDAAVDASC 611
G+ LL+ L R E L P Q + + L EI+ A+ A
Sbjct: 356 GEDLLEVPLTSRHERLESVLAAGPDRDQDPAEVDGLSLLWLTDDPGEIEAIDADALAAGH 415
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
EG+++K D+ Y P +R NW K K D D+LD V A G G+R G F
Sbjct: 416 EGIMLKNP--DSAYSPGRRGKNWRKRKPDV-----DTLDCVVTGAEWGEGRRATFLGTFE 468
Query: 672 LACYDSNNEEFQSICKIGTGFSE 694
L+ D + E +++ K+ TG ++
Sbjct: 469 LSVRDGD--ELETVGKVATGITD 489
>gi|55377348|ref|YP_135198.1| DNA ligase [Haloarcula marismortui ATCC 43049]
gi|74520109|sp|Q5V4R0.1|DNLI_HALMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|55230073|gb|AAV45492.1| DNA ligase [Haloarcula marismortui ATCC 43049]
Length = 554
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 254/560 (45%), Gaps = 72/560 (12%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I +E+ IT+ V ++ R + DL + ++ PA+E L IG +A+
Sbjct: 13 IESESADTAITEAVTDLFRA----SGSDLSTLARFVQGRVFPAYESRTLDIGPRLCYEAI 68
Query: 263 AEACGRTES--HVKKQYQEMGDLGLVA--------KASRSSQSMMRKPDPLTITKVFDTF 312
A A G+ S V+++ ++G++G VA + + + D LT+ ++ D
Sbjct: 69 ARAAGQNVSADDVEQRLADLGEIGAVAASYDLGGQQGLAAFGAGGGGDDALTVAELDDEL 128
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
R +A G SQ K + + L + E YL RL+ S++RIG+ E T+ A AA
Sbjct: 129 RNLAAVDGSGSQGTKVDILFGLFSRCSSTEAGYLARLVLSEMRIGVGEGTVRDA--AAAA 186
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
++ P+E V++ V Y + +G L+ T + G P+
Sbjct: 187 FD-----------VPVE----AVERAVQVSNDYGMVAEVARDEGESGLA-TVTLEIGRPV 230
Query: 433 GPMLAKPTKGVSEIVNKFQDME-FTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKF 490
MLA+ + +D + E+KYDG R Q+H+ DG ++SRN E T
Sbjct: 231 QAMLAQAGT----VAGALEDWDRAAVEWKYDGARVQVHF--DGEDARLFSRNMEEVTDPL 284
Query: 491 PDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
P+VV V S L P+ +LD E+VA D + LPFQ + R R+ ++ + DV +
Sbjct: 285 PEVVETVESTLDAPA----ILDGEVVAVD-DGGDPLPFQEVLRRFRRKHDVAAAREDVAV 339
Query: 550 --YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
+AFD L+ G+ LL L R + L F + F+ S D +EI+ A+
Sbjct: 340 RLHAFDCLHAAGEDLLDAALETRHDRLESLFPADSDV--FSQMWLSDDAEEIESLEAEAL 397
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
A EG+++K D A Y P KR +W K K D ++LD V A G G+R V
Sbjct: 398 AAGQEGIMLK--DPTAAYSPGKRGKHWRKRKPDV-----ETLDCVVTGAEWGEGRRANVL 450
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD----TIS 723
G+F L+ ++ + ++ + TG ++ L++ + + PY R D +
Sbjct: 451 GSFELSV--RTDDGYATVGNVATGITDEELDD--------LTERFEPYIRSEDGRDVVLD 500
Query: 724 PDVWFE-PTERPETSNSPAS 742
P V FE E + S S AS
Sbjct: 501 PAVVFEVGYEEIQASQSYAS 520
>gi|320170076|gb|EFW46975.1| ATP dependent DNA ligase [Capsaspora owczarzaki ATCC 30864]
Length = 1199
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 155/575 (26%), Positives = 255/575 (44%), Gaps = 69/575 (12%)
Query: 188 GERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPA-- 245
G+ VPF ++ + + IS++T R + +++ + L+ E + V+ + P+
Sbjct: 118 GDSVPFAAVATLLEQISSDTKRSVKQNVLGSFLQRWRENGKSNPNTTVFPIVRLLLPSFD 177
Query: 246 HEGLELGIGDASIIKALAEACG---------RTESHVKKQY--QEMGDLGLVAKASRSSQ 294
E GI DA + K ++ G + +++ K Q+ Q GD +VA +
Sbjct: 178 RERGMYGIKDAMLAKYYSDILGIVRGSEDYNKLKNYTKPQHNRQSAGDFAMVAFFVLQRR 237
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
R +PLT+T V +A E +++ K+ ++++L +T E ++LIR++ +
Sbjct: 238 LADRPSNPLTVTDVNTLLDQLATEYMSNNRPGVKDTLRSMLFRSTAREQKWLIRIIGKDV 297
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
+ G++ QT+L Q AV +F+V ++ L
Sbjct: 298 KCGMSAQTVLKTFHQDAV------------------------DLFNVCSNLRRVCWQLRD 333
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
+SN S P PMLA + +S+I +K F E K+DG+R +H D
Sbjct: 334 PTKRLVSNDVSLFH--PFRPMLAM-RENISKIADKLG--TFFMEIKFDGDRVMMHKQGD- 387
Query: 475 SVEIYSRNAERNTGKF---PD---VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQ 528
+ +SR + + K+ PD + V KP V +LD E++ YD K+ F
Sbjct: 388 KYQYWSRKSINYSDKYGFSPDCGTITQYVHNAFKPGVTDVILDGEMILYD---TKLDCFV 444
Query: 529 TLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFA 588
S+ K+ + +D + C FDI++ NG L L R L F G FA
Sbjct: 445 PKSSADVKSFAGTD-EQRPCYVVFDIVFLNGTSLCNMPLIERLRTLRKVFTPITGRIMFA 503
Query: 589 TTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDS 648
T EI FL+ A+D EG+++K M +TY P KR W K+K +Y +S +
Sbjct: 504 DQRTGTTSQEIIDFLNEAIDNREEGVMVKNM--KSTYAPDKRDGGWYKIKPEYGDSFAE- 560
Query: 649 LDLVPIAAFHGRGK-RTGVYGAFLLACY--DSNNEE----FQSICKIGTGFSEAMLEERS 701
LD++ + ++G GK R G+ F+ A +N +E F S CK+GTG+S + L+E
Sbjct: 561 LDVLIVGGYYGIGKRRGGMVSHFMCAVAVPPANPQEPPTVFHSFCKVGTGYSMSQLKEFG 620
Query: 702 SSLRSKVIP----KPRPYYRFADTIS--PDVWFEP 730
L P P A PDVW EP
Sbjct: 621 EQLEPHWHPFDTQNPPSQILLATGFKERPDVWIEP 655
>gi|448570964|ref|ZP_21639475.1| DNA ligase, ATP dependent [Haloferax lucentense DSM 14919]
gi|448595860|ref|ZP_21653307.1| DNA ligase, ATP dependent [Haloferax alexandrinus JCM 10717]
gi|445722882|gb|ELZ74533.1| DNA ligase, ATP dependent [Haloferax lucentense DSM 14919]
gi|445742314|gb|ELZ93809.1| DNA ligase, ATP dependent [Haloferax alexandrinus JCM 10717]
Length = 585
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 152/538 (28%), Positives = 242/538 (44%), Gaps = 46/538 (8%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHV 273
V ++L + +DL V ++ PA + L IG +A+A A G + V
Sbjct: 22 VVSLLSDLFSDAGDDLPTVARFVQGRVFPAWDSTTLDIGPRLCHEAIARAAGPNVSADDV 81
Query: 274 KKQYQEMGDLGLVAKA-SRSSQSMMR-----KPDPLTITKVFDTFRLIAKEAGKDSQEKK 327
+ + + G++G VA + Q + + D LT+ +V R +A +G S+E K
Sbjct: 82 EDRLADRGEIGAVAASYDFGGQRGLAAFGSGEQDGLTVAEVDSELRALAAASGSGSEETK 141
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA----------AVYNEQH 377
+ L E ++L RL+ S++RIG+ E T+ A+ +A ++
Sbjct: 142 LKTLYGLFNRTDPDEARFLARLVLSEMRIGVGEGTVRDAVAEAFLVAPADAAAIRDDDAD 201
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
S+ + EA V + V Y + +G L + G P+ MLA
Sbjct: 202 SETEAAARERRNEAIAAVARALQVSNDYGMVAGLARDEGETGL-DGVRLEVGRPVQAMLA 260
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ ++ ++++ E K+DG R Q+H DG V ++SRN E T P+VV V
Sbjct: 261 QAGT-AADALDEWGTA--AVETKFDGARVQVHRDADGEVSLFSRNMEDVTDALPEVVEFV 317
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDIL 555
+ V +LD E+VA D + LPFQ + R R+ + ++ V V + AFD L
Sbjct: 318 AGAVDDPV---ILDGEVVAMD-DGGDPLPFQEILRRFRRKHDVDRMREEVRVELRAFDCL 373
Query: 556 YRNGQPLLQEQLRVRREHLYDSF-EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGL 614
+ G LL + L R + L ++ P L S D DEI + A+DA EG+
Sbjct: 374 HAAGDDLLADPLAARHDRLTALLGDDSPAVSDL---LLSDDPDEIAAYEADALDARHEGI 430
Query: 615 IIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLAC 674
++K DA Y P R NWLK K D ++LDLV A G G+R G FLL+
Sbjct: 431 MLKNP--DAPYSPGDRGKNWLKRKPDV-----ETLDLVVTGAEWGEGRRAEFLGTFLLSA 483
Query: 675 ---YDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
+S ++ F++I K+ TG ++ L E + L ++ R + D I P V FE
Sbjct: 484 RVEAESGDDAFETIGKVATGITDEELAELTDLLEPEI---EREAGKEVD-IRPSVVFE 537
>gi|448688774|ref|ZP_21694511.1| DNA ligase [Haloarcula japonica DSM 6131]
gi|445778644|gb|EMA29586.1| DNA ligase [Haloarcula japonica DSM 6131]
Length = 553
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 146/511 (28%), Positives = 234/511 (45%), Gaps = 58/511 (11%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I E+ IT+ V ++ DL + ++ PA+E L IG +A+
Sbjct: 13 IEAESADTAITEAVTDLF----AAAGPDLQTLARFVQGRVFPAYESRTLDIGPRLCYEAI 68
Query: 263 AEACGRTES--HVKKQYQEMGDLGLVAKA-------SRSSQSMMRKPDPLTITKVFDTFR 313
A A G+ S V+ + +MG++G VA + ++ + D LT+ ++ +T R
Sbjct: 69 ARAAGQNVSADDVEGRLADMGEIGTVAASYDLGGQQGLAAFGVGGGSDALTVAELDETLR 128
Query: 314 LIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY 373
+A G SQ K + + L E YL RL+ S++RIG+ E T+ A+ AA +
Sbjct: 129 DLAAVEGSGSQGTKVDILFGLFSRCASTEAGYLARLVLSEMRIGVGEGTVRDAI--AAAF 186
Query: 374 NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIG 433
+ P+E V++ V Y + A +G L NT + G P+
Sbjct: 187 D-----------VPVEG----VERAIQVSNDYGMVAEAARDEGEAGL-NTITLEIGRPVQ 230
Query: 434 PMLAKPTKGVSEIVNKFQDME-FTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKFP 491
MLA+ + +D + E+KYDG R Q+H+ DG ++SRN E T P
Sbjct: 231 AMLAQ----AGTVAGVLEDWDRAAVEWKYDGARVQVHF--DGEDARLFSRNMEEVTDPLP 284
Query: 492 DVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI- 549
+VV V S L P +LD E+VA D + LPFQ + R R+ ++ + DV +
Sbjct: 285 EVVDTVESTLDAP----VILDGEVVAVDADGDP-LPFQEVLRRFRRKHDVAAAREDVAVR 339
Query: 550 -YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVD 608
+AFD L+ +G LL L R + L F + + S + DEI A+
Sbjct: 340 LHAFDCLHADGDDLLDAPLETRHDRLESLFPADSDV--VSRMWLSANPDEIADLEGDALA 397
Query: 609 ASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
A EG+++K D A Y P KR +W K K D ++LD V A G G+R V G
Sbjct: 398 AGQEGIMLK--DPTAAYSPGKRGKHWRKRKPDV-----ETLDCVVTGAEWGEGRRANVLG 450
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
+F L+ ++ + ++ + TG ++A L++
Sbjct: 451 SFELSVRTADG--YVTVGNVATGITDAELDD 479
>gi|9634713|ref|NP_039006.1| DNA ligase [Fowlpox virus]
gi|19864495|sp|Q67480.2|DNLI_FOWPN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|7271541|gb|AAF44387.1|AF198100_34 ORF FPV043 DNA ligase [Fowlpox virus]
gi|41023335|emb|CAE52589.1| A50R DNA ligase orthologue [Fowlpox virus isolate HP-438/Munich]
Length = 564
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 223/484 (46%), Gaps = 49/484 (10%)
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKAS-RSS 293
VY+ + P L I D ++K ++ + K +GD+ V + + S
Sbjct: 41 VYIITKLLLPGTGKLIYNINDKQLVKLFSKIFCHDADEMYKYVINIGDVAYVIGSFLKKS 100
Query: 294 QSMMRKPDPLTIT-KVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQS 352
+S++ T+T D F +++ + K+ IK ++ T + +++IRL++
Sbjct: 101 KSVVDYATESTLTLHEVDCFLTRLSTVTRENDQIKE--IKKIIPRCTPNDLRHIIRLIKH 158
Query: 353 KLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPAL 412
LR+ + + +L+ L + A +F + E++V
Sbjct: 159 DLRMNIGPKHVLSGLHKDAY------------------------GIFKLCNNLEQVVQRS 194
Query: 413 LTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLE 472
L D + L +P+ PMLA K SE V K + E+KYDGER QIH
Sbjct: 195 LEDNIKPL-----IELMVPLQPMLASACKTFSEAVKKCPN-GIIVEFKYDGERIQIHK-H 247
Query: 473 DGSVEIYSRNAERNT-GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
D + + +SR+ + T K D + R PS ++ +LD EI+ D E + LPF TL
Sbjct: 248 DKNFKYFSRSLKPITPHKVTDFEELLDR-AFPSAKNMILDGEIILIDTETNQPLPFGTLG 306
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
+ VCI+ FD LY N L+ + L RR ++ + +E P +
Sbjct: 307 INKKSMYH----NACVCIFIFDCLYFNDTVLIDKPLIERRNIIHANIKEIPNRILLSEVK 362
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES--IGDSL 649
+E+ K L + + EG ++K D YEP R WLK+KKDY++ + D
Sbjct: 363 NISTDEELSKLLHIVLSKNIEGFVLK--DAKGVYEPGMR--RWLKIKKDYLDGCVMADKA 418
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
DLV + A++G+G ++G+ +FL+ CYD+ +E++ ++ K G ++ L+E + +L V+
Sbjct: 419 DLVVLGAYYGKGNKSGILSSFLMGCYDTKSEKWCTVTKCSGGHTDLELQEINDNL--SVV 476
Query: 710 PKPR 713
P R
Sbjct: 477 PFDR 480
>gi|448315049|ref|ZP_21504703.1| DNA ligase I, ATP-dependent Dnl1 [Natronococcus jeotgali DSM 18795]
gi|445612510|gb|ELY66233.1| DNA ligase I, ATP-dependent Dnl1 [Natronococcus jeotgali DSM 18795]
Length = 598
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 145/519 (27%), Positives = 232/519 (44%), Gaps = 84/519 (16%)
Query: 240 NKIAPAHEGLELGIGDASIIKALAEACGRTES--HVKKQYQEMGDLGLVA-----KASRS 292
++ PA L IG ++ +A+A A G S V+ + E+G++G VA R
Sbjct: 51 GRVFPAWTSRTLDIGPSACYEAIARAAGTNVSPDDVEDRLAEVGEIGDVAASYDFGGQRG 110
Query: 293 SQSMMRKPDP------LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYL 346
+ D LT+ +V + +A G SQ++K + + L + E +YL
Sbjct: 111 LSAFAGGDDSANGGGGLTVPEVDEALYELAAAEGSGSQDRKVDLLFGLFNRCSSDEARYL 170
Query: 347 IRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYE 406
RL+ S++RIG+ E T+ A+G+A P+E V++ V Y
Sbjct: 171 ARLVLSEMRIGVGEGTVRNAIGEA-------------FDVPVER----VERALQVSNDYG 213
Query: 407 KIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDM-EFTCEYKYDGER 465
++ DG L + + G P+ MLA+ + +D E E+KYDG R
Sbjct: 214 EVARVAREDGREGL-DAMTLEVGRPVQAMLAQ----AGTVTGALEDWDEAGVEWKYDGAR 268
Query: 466 AQIHYLEDG----------------SVEIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSF 508
Q+HY G + ++SRN E T P+VV A L +P+
Sbjct: 269 VQLHYDPGGVAIDGADATVAADDAGEIRVFSRNMEDVTDALPEVVEFADEHLAEPA---- 324
Query: 509 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILYRNGQPLLQEQ 566
+LD E+VA D + + LPFQ + R R+ ++ + DV + FD L+ +G+ LL+E
Sbjct: 325 ILDGEVVAVDDDGEP-LPFQEVLKRFRRKHDVAKAREDVAVRPVFFDCLHADGEDLLEEP 383
Query: 567 LRVRREH----LYDSFEEEPGFFQFATTLTSIDL-DEIQKFLDAAVDASCEGLIIKTMDR 621
L R E L + E EP + + L D DEI++ A++A EGL++K D
Sbjct: 384 LTTRHERLEAVLREDSEREPDEVEGLSLLWRTDDPDEIERIDADALEAGHEGLMLK--DP 441
Query: 622 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEE 681
D+TY P +R +W K K D ++LD V A G G+R G F L+ D + E+
Sbjct: 442 DSTYSPGRRGKHWRKRKPDV-----ETLDCVVTGAEWGEGRRATFLGTFELSVRDGDGEK 496
Query: 682 ------------FQSICKIGTGFSEAMLEERSSSLRSKV 708
+++ K+ TG ++ L E + L V
Sbjct: 497 RRSAGSAVEPRNLETVGKVATGITDEKLAELTELLEPHV 535
>gi|448435513|ref|ZP_21586767.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum tebenquichense DSM
14210]
gi|445683538|gb|ELZ35931.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum tebenquichense DSM
14210]
Length = 634
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 228/497 (45%), Gaps = 72/497 (14%)
Query: 225 ETTPEDLVPVVY-LAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHVKKQYQEMG 281
+ P D +PVV ++ PAH+ L +G A +++A A G + S V+ + E G
Sbjct: 49 DDGPSDDLPVVARFLLGRVFPAHDTRTLDVGPALCRESIARAAGPNVSASDVEDRLAERG 108
Query: 282 DLGLVAKA-----SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLV 336
++G VA A + + D LT+ V + R +A E+G S+ +K++ + L
Sbjct: 109 EIGAVAAAYDLGGQQGLAAFGGGRDALTVAAVDEELRDLAAESGDGSESRKRDALFGLFT 168
Query: 337 AATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPL-------- 388
+ E +L RL+ ++R+G+ E T+ A+ +A + P P ++
Sbjct: 169 RCSPSEAAFLARLVLGEMRLGVGEGTVRDAVAEAFI------APEPEVEGDDDSAAAADS 222
Query: 389 ----------EEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAK 438
+EA V++ V Y ++ +G+ L S G P+ MLA+
Sbjct: 223 ESDDAALRASDEAVAAVERALQVTNDYGRVAVRARDEGIEGLREE-SLRVGRPVQAMLAQ 281
Query: 439 PTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL--------------EDGSV--EIYSRN 482
++ V+ F E E K+DG R Q+HY +DG++ +YSRN
Sbjct: 282 AGT-ATDAVDSFG--EVAVETKFDGARVQVHYAPAGTAPADAKASDGDDGALGPRLYSRN 338
Query: 483 AERNTGKFPDVVLAVS-RLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLS 541
+ T P++V V+ R+ P+ +LD E+VA D + LPFQ + R R+ +
Sbjct: 339 MDDVTEALPEIVEYVAERVDVPA----ILDGEVVAVD-DAGDPLPFQEVLRRFRRKHDVD 393
Query: 542 DIK--VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEI 599
++ V + ++AFD L+ +G LL E LRVR E L + A +I E
Sbjct: 394 RMRETVSLRLHAFDCLHADGDDLLDEPLRVRHERLRAVLGDAAADLALADDPDAIAAAER 453
Query: 600 QKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
A+DA EG+++K DA Y P R +WLK K D ++LD V + A G
Sbjct: 454 D-----ALDAGHEGVMLKNP--DAAYTPGDRGRDWLKRKPDV-----ETLDAVVVGAEWG 501
Query: 660 RGKRTGVYGAFLLACYD 676
G+R ++G FLLA D
Sbjct: 502 EGRRAELFGTFLLAVRD 518
>gi|448446117|ref|ZP_21590603.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum saccharovorum DSM
1137]
gi|445684309|gb|ELZ36687.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum saccharovorum DSM
1137]
Length = 631
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 146/519 (28%), Positives = 239/519 (46%), Gaps = 60/519 (11%)
Query: 231 LVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHVKKQYQEMGDLGLVA- 287
L VV ++ PAH+ L +G A +A+A A G T + V+ + E G++G VA
Sbjct: 71 LATVVRFLLGRVFPAHDTRTLDVGPALCREAIARAAGPNVTAADVEARLAEAGEIGAVAA 130
Query: 288 ----KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEP 343
R + D L++ V R +A AG S+ +K++ + L E
Sbjct: 131 GFEFGGQRGLAAFGEGRDQLSVAAVDAELRELAAAAGDGSESRKRDALFGLFNRCEPAEA 190
Query: 344 QYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKP---PPNIQSPL---EEAAKIVKQ 397
+ L RL+ ++R+G+ E + A+ +A + + + + P N S L +EA V++
Sbjct: 191 KVLARLVLGEMRLGVGEGAVRDAIAEAFLADSEAAAPESESGNGGSTLRAGDEAVAAVER 250
Query: 398 VFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC 457
V Y + +G+ L G P+ MLA+ ++ V F E
Sbjct: 251 ALQVTNDYGHVAVLARDEGLVGL-RAEGLAVGRPVQAMLAQAGT-ATDAVEAFG--EVAV 306
Query: 458 EYKYDGERAQIHYLEDGSVE----------------------IYSRNAERNTGKFPDVVL 495
E K+DG R Q+HY+ + SVE IYSRN + T P+VV
Sbjct: 307 ETKFDGARVQVHYVPESSVEGEDGTGGNVSDDDSGGDGLGPRIYSRNMDDVTDALPEVVE 366
Query: 496 AV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAF 552
V +R+ P +LD E+VA D + LPFQ + R R+ + ++ +V + +AF
Sbjct: 367 CVEARVSVP----VILDGEVVAIDDDGDP-LPFQEVLRRFRRKHDVDRMREEVGLRLHAF 421
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCE 612
D L+ +G+ LL E LR R + L + + +FA D I+ AA+ A E
Sbjct: 422 DCLHADGEDLLDEPLRARHDRLVEVLPDAAAGVEFAD-----DPAAIEAAEAAALAAGHE 476
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
G+++K ++ Y P R +WLK K D ++LD V I A G G+R ++G FLL
Sbjct: 477 GVMLKNP--ESAYTPGDRGRDWLKRKPDV-----ETLDAVVIGAEWGEGRRAELFGTFLL 529
Query: 673 ACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
+ ++EF +I K+ TG ++ L + + L V+ +
Sbjct: 530 GVR-AGDDEFATIGKVATGLTDEELADLTERLEPHVVSE 567
>gi|453602|emb|CAA82805.1| DNA ligase [Fowlpox virus]
Length = 564
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 222/484 (45%), Gaps = 49/484 (10%)
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKAS-RSS 293
VY+ + P L I D ++K ++ + K +GD+ V + + S
Sbjct: 41 VYIITKLLLPGTGKLIYNINDKQLVKLFSKIFCHDADEMYKYVINIGDVAYVIGSFLKKS 100
Query: 294 QSMMRKPDPLTIT-KVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQS 352
+S++ T+T D F +++ + K+ IK ++ T + +++IRL++
Sbjct: 101 KSVVDYATESTLTLHEVDCFLTRLSTVTRENDQIKE--IKKIIPRCTPNDLRHIIRLIKH 158
Query: 353 KLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPAL 412
LR+ + + +L+ L + A +F + E++V
Sbjct: 159 DLRMNIGPKHVLSGLHKDAY------------------------GIFKLCNNLEQVVQRS 194
Query: 413 LTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLE 472
L D + L +P+ PMLA K SE V K + E+KYDGER QIH
Sbjct: 195 LEDNIKPL-----IELMVPLQPMLASACKTFSEAVKKCPN-GIIVEFKYDGERIQIHK-H 247
Query: 473 DGSVEIYSRNAERNT-GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
D + + +SR+ + T K D + R PS + +LD EI+ D E + LPF TL
Sbjct: 248 DKNFKYFSRSLKPITPHKVTDFEELLDR-AFPSANNMILDGEIILIDTETNQPLPFGTLG 306
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
+ VCI+ FD LY N L+ + L RR ++ + +E P +
Sbjct: 307 INKKSMYH----NACVCIFIFDCLYFNDTVLIDKPLIERRNIIHANIKEIPNRILLSEVK 362
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES--IGDSL 649
+E+ K L + + EG ++K D YEP R WLK+KKDY++ + D
Sbjct: 363 NISTDEELSKLLHIVLSKNIEGFVLK--DAKGVYEPGMRR--WLKIKKDYLDGCVMADKA 418
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
DLV + A++G+G ++G+ +FL+ CYD+ +E++ ++ K G ++ L+E + +L V+
Sbjct: 419 DLVVLGAYYGKGNKSGILSSFLMGCYDTKSEKWCTVTKCSGGHTDLELQEINDNL--SVV 476
Query: 710 PKPR 713
P R
Sbjct: 477 PFDR 480
>gi|448307684|ref|ZP_21497579.1| DNA ligase I, ATP-dependent Dnl1 [Natronorubrum bangense JCM 10635]
gi|445595856|gb|ELY49960.1| DNA ligase I, ATP-dependent Dnl1 [Natronorubrum bangense JCM 10635]
Length = 579
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 233/515 (45%), Gaps = 71/515 (13%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES--HV 273
+ +R ++E +DL V ++ PA + L IG + +A+A A G S V
Sbjct: 22 IIAHVRELLEDAGDDLAVVARFVQGRVFPAWQSTTLDIGPNTCYEAIARAAGTNVSADDV 81
Query: 274 KKQYQEMGDLGLVAKA-------SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEK 326
+++ E+G++G VA + + D LT+ +VF+T +A +G S +
Sbjct: 82 EERLAEVGEIGEVAAGYDFGGQQGLGAFTAGGTSDALTVREVFETLVDLAATSGSGSHDT 141
Query: 327 KKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQS 386
K + + L E +YL RL+ S++RIG+ E + A+ +A
Sbjct: 142 KVDLLFGLFNRCESAEARYLARLVLSEMRIGVGEGAVRDAISEA-------------FDV 188
Query: 387 PLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEI 446
P E V++ V Y ++ DG+ L + G P+ MLA+ V++
Sbjct: 189 PGER----VERALQVSNDYGQVARVARDDGLEGL-DAMDLEVGRPVQAMLAQAGT-VTDA 242
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYL-EDGS----VEIYSRNAERNTGKFPDVV-LAVSRL 500
+ ++ E E+KYDG R Q+H+ E+G+ ++SRN E T P+VV A L
Sbjct: 243 LEEWD--EAAVEWKYDGARVQLHHDPENGTDAAETRVFSRNMEDVTNALPEVVEFAEHTL 300
Query: 501 KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILYRN 558
++P+ +LD E+VA D + LPFQ + R R+ ++ + DV + FD L+
Sbjct: 301 EEPA----ILDGEVVAVDDDGTP-LPFQEVLKRFRRKHDVAKAREDVEVRPVFFDCLHAG 355
Query: 559 GQPLLQEQLRVRREH----LYDSFEEEPGFFQFATTLTSIDL-DEIQKFLDAAVDASCEG 613
G LL E L R E L D ++EP + L D DEI+ A++ EG
Sbjct: 356 GDDLLAESLTTRHERLEGLLADDPDQEPESVDGLSLLWRTDDPDEIESIDAKALEGGHEG 415
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL- 672
+++K D D+TY P +R +W K K D ++LD V A G G+R G F L
Sbjct: 416 IMLK--DPDSTYSPGRRGKHWRKRKPDV-----ETLDCVVTGAEWGEGRRATFLGTFELS 468
Query: 673 -------------ACYDSNNEEFQSICKIGTGFSE 694
A DS N ++ K+ TG ++
Sbjct: 469 VRADDGGERRSADAAVDSQN--LATVGKVATGITD 501
>gi|166157050|emb|CAO79507.1| putative DNA ligase [uncultured candidate division WWE3 bacterium
EJ0ADIGA11YD11]
Length = 600
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/574 (24%), Positives = 256/574 (44%), Gaps = 65/574 (11%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+ FI S + T R+ + DI+ ++ + E+ YLA+ I E +
Sbjct: 1 MKFIDFSKYLQRLEETTKRLEMIDILTELISNL---DAEETDKAFYLASGYIKAPFESEK 57
Query: 251 LGIGDASIIKALAEACGRTE-----SHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTI 305
I + +IK + + E ++K Y GDLG V + + +K D +I
Sbjct: 58 FNIAEKMMIKIIEQTFSTPEKPTIKEEIEKIYTNTGDLGNVVFELKKA---TKKYDEPSI 114
Query: 306 TKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLA 365
+++ IA+ G SQ+ K ++ LL +++ R++ +R+G E T++A
Sbjct: 115 SEIHRNLSEIAQITGLGSQDLKISKTSNLLKRVDPLSAKHITRIILGTMRLGFTELTIIA 174
Query: 366 ALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCS 425
AL N A++I K+ +++ P I + G+ + N
Sbjct: 175 AL--------------SNFLKNKSLASEIEKK-YNIHPDIGFIAKEIKKKGIKGIEN-IK 218
Query: 426 FTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS---------- 475
G+P+ A+ + EI+ + E+K+DG R Q+H+ ++G+
Sbjct: 219 MEIGVPVLSQKAQRVGSMGEILERIHKA--WAEFKFDGTRIQLHFAKEGNSFPNKISHDK 276
Query: 476 ---------------VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDRE 520
++ ++RN E T ++P+++ A K+ S +LD E + Y++E
Sbjct: 277 ETQKNLFDSKESKFFIKTFTRNLEETTHQYPEIIEAAK--KQIKADSVILDGEGIGYNKE 334
Query: 521 KQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFE 579
K LPFQ R RK N++ + K+ + FDILY NG+ ++ + L RR+ L +
Sbjct: 335 TGKFLPFQETIQRKRKYNITETAKKIPFKYFVFDILYLNGESVIDKPLVERRKLLASVIQ 394
Query: 580 EEPG-FFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638
PG + + + + ++++++ + A EG+++KT D Y+ RS +W+K K
Sbjct: 395 --PGQVIEVDDHIETEEFEKLEEYFEMAKSQGLEGIVVKTPDDH--YQAGARSYSWIKYK 450
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRT--GVYGAFLLACYDSNNEEFQSICKIGTGFSEAM 696
+ + DS+D V + +HGRG R+ G+ G FL+ YD + +++I KIGTG +E
Sbjct: 451 TADQKLLSDSVDCVVLGYYHGRGVRSKFGI-GGFLVGVYDKDRNVYKTISKIGTGLTEED 509
Query: 697 LEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
L I PDV+ EP
Sbjct: 510 LIFLKKECDKIKIKDKPKNVEMNKIFKPDVFVEP 543
>gi|145482377|ref|XP_001427211.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394291|emb|CAK59813.1| unnamed protein product [Paramecium tetraurelia]
Length = 568
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 148/576 (25%), Positives = 248/576 (43%), Gaps = 102/576 (17%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVME-TTPEDLVPVVYLAANKIAPAHEGLEL 251
F + S VFD I E+ R + + + L+ E E+ + N + +E
Sbjct: 18 FRWCSQVFDQIEKESRRKIKISLFQDALKQAQEFKVKEEFIRFTLCDVNSQSQL---IEA 74
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDT 311
+ + A+A+ S V++ Y E+ + + +K + + +F
Sbjct: 75 AVPANVLYSAIAQTYNLEFSLVERLYGEINSMNNFEDVFNAH----KKSTSIQFSSLFQK 130
Query: 312 FRLIAKEAGKDSQEKKKNRIKALL-VAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
+ I + +G +E+K+ +K LL + ++ E +YLIR L+ ++RIGL+ Q++ +
Sbjct: 131 IQEIFELSGGGCEEQKEVLVKDLLSLCSSAQEVKYLIRFLKKRMRIGLSTQSV------S 184
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
+ +E K QS + GI
Sbjct: 185 QLLDESERKRLLGYQS-----------------------------------GSGDLQKGI 209
Query: 431 PIGPMLAKPTKG--------VSEIVNKFQDMEFT-C--EYKYDGERAQIHYLEDGSVEIY 479
PI P LAK + + +I KF + + C EYKYDGER Q+HY +G V+++
Sbjct: 210 PIQPQLAKSFQKENKEEEITMEKIKKKFLNDDLGGCYFEYKYDGERLQVHYT-NGEVKLF 268
Query: 480 SRNAERNTGKFPDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
R+ E T +F ++ + +LDCE++ Y +ILPFQ + + +N
Sbjct: 269 GRSLEEKTNQFKELSNQLKGHFDNNKFDDVILDCEMICY--HNGEILPFQEMQNKTYEN- 325
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDS----FEEEPGFFQFATTLTSI 594
V + + FDILY N Q LL + +R +Y+S ++ +
Sbjct: 326 -----SVYLSLVCFDILYHNKQILLNKTYS-QRLQIYNSILKPITKQRQVISHIISHKFA 379
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPI 654
+ +E+ +F A+ EG++IK RD Y P R+ +WLK+KK+ +DLV +
Sbjct: 380 NENEMDRFYKQALLDGLEGIMIK---RDTFYTPGSRN-DWLKIKKE------KDIDLVVL 429
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR- 713
++G+GKR G+FLL Y+ N I KIGTGFS+ LEE L + + KP
Sbjct: 430 GGYYGQGKRQQWLGSFLLGIYE--NGRLHPIAKIGTGFSDQKLEE----LTKRYMSKPSG 483
Query: 714 --PYYRFADTISPDVWFEPTERPETSNSPASIVYDS 747
P + P VWF + N + YD+
Sbjct: 484 SCPSHLIGFKDQPHVWF-------SQNDVWEVTYDT 512
>gi|340624290|ref|YP_004742743.1| ATP-dependent DNA ligase I [Methanococcus maripaludis X1]
gi|339904558|gb|AEK20000.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus maripaludis X1]
Length = 573
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 146/523 (27%), Positives = 246/523 (47%), Gaps = 60/523 (11%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMET-TPEDLVPVVYLAANKIAPAHEGLELGIGDAS 257
+ D I T R+ TD ++ + PE+L V + ++ E E+GIG
Sbjct: 9 ILDKIEKTTKRLEKTDYFVELIDFIKNNEKPENLKQVSQITIGRVFAEFENKEIGIGPNL 68
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLGL-VAKASRSSQSMMRKPDPLTITKVFDTFRLIA 316
+++A+ + G +E +K + +E GD+G V S + + + LT+ +V+ T + ++
Sbjct: 69 LLEAV-KTTGISEKDLKSKIKETGDIGTAVENLSSNIKQVSLFSQALTLEEVYSTLKKLS 127
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
+ G SQ+KK I LL+ A E +Y+ RL+ +RIG+ T+LA+ N+
Sbjct: 128 EIEGNSSQKKKTRIISNLLILADPVESRYISRLILEDMRIGMNIPTILASFSNYFNVNK- 186
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI--PIGP 434
E KI + + EK++ ++ N + PI P
Sbjct: 187 ------------ESVEKIYAVTNDIGLLGEKLISG------SDIENDPELKLKVFRPIKP 228
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLA+ T + + + + + +F E KYDG R Q+H +G V+IYSR E T P++
Sbjct: 229 MLAQLTPSIEDAMIETKMPQF--ETKYDGARVQVHK-SNGDVKIYSRRLENITNSVPEL- 284
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAF 552
V +KK + + +L+ E VA D + K PFQ + R R+ ++ + K+ + IY F
Sbjct: 285 --VEEIKKLDIDNIILEGECVAMDLDSGKPRPFQDILRRFRRKYNIDKMAEKIALRIYFF 342
Query: 553 DILYRNGQPLLQEQLRVRREHL--------YDS---------FEEEPGFFQFATTLTSID 595
D+LY N + L+ L+ RRE L +DS F + F F L S +
Sbjct: 343 DVLYYN-RGLIDTPLKTRREILEKLFGTNNWDSELEKIKKEIFSNKMLFSSFK--LNSDN 399
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+ +++F + ++ EG++IK + DA Y P R K+K ++LD+V
Sbjct: 400 PNLVKEFFNWSLSIGHEGIMIK--NPDAPYTPGSRVKTMYKVKPTL-----ENLDVVVTR 452
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
A G GKR YG++ L+ D N+ I +G+G +E LE
Sbjct: 453 AKIGMGKRKDWYGSYELSVKD-NDSNLHVIGNVGSGLTEDDLE 494
>gi|448357845|ref|ZP_21546540.1| ATP-dependent DNA ligase I [Natrialba chahannaoensis JCM 10990]
gi|445648153|gb|ELZ01115.1| ATP-dependent DNA ligase I [Natrialba chahannaoensis JCM 10990]
Length = 587
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 140/523 (26%), Positives = 231/523 (44%), Gaps = 79/523 (15%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRT--ESHV 273
+ +R ++ +DL V ++ PA + L IG + +A+A A G V
Sbjct: 22 IVAHVRDLLTEAGDDLPIVARFVQGRVFPAWDSTTLDIGPNTCYEAIARAAGTNVGADDV 81
Query: 274 KKQYQEMGDLGLVAKA------------------------SRSSQSMMRKPDPLTITKVF 309
+++ E G++G VA + + + D LT+ KV
Sbjct: 82 EERLAESGEIGAVAASYDFGGQQGLGAFVGGGGSGAGGADDDNDDNGGNGTDDLTVRKVH 141
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
DT +A G SQ++K + + L + E +YL RL+ S++RIG+ E T+ A+ +
Sbjct: 142 DTLTDLAAAEGSGSQDRKVDLLFGLFNRCSSDEARYLARLVLSEMRIGVGEGTVRDAIAE 201
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A P Q P+E A ++ Y ++ DGV L + G
Sbjct: 202 A------FDVP----QEPVERALQVSND-------YGQVAETARNDGVSGL-DEIELKIG 243
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY----------LEDGSVEIY 479
P+ MLA+ V++ + ++ E+KYDG R Q+H+ +G ++
Sbjct: 244 RPVQAMLAQAGT-VTDALEEWDAA--AVEWKYDGARIQLHHDPTNPGNPDGDSNGETHVF 300
Query: 480 SRNAERNTGKFPDVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
SRN E T P+VV A L P+ +LD E+VA D + LPFQ + R R+
Sbjct: 301 SRNMEAVTNALPEVVEFADQHLDCPA----ILDGEVVAIDDDGSP-LPFQEVLKRFRRKH 355
Query: 539 SLSDIKVDVCI--YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPG-----FFQFATTL 591
++ + DV + FD L+ +G LL+E L R + L EP F+
Sbjct: 356 DVAKAREDVTVRPVFFDCLHADGDDLLEEPLTARHDQLQSVLAAEPQQEPEEIDGFSLLW 415
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
+ D DEI+ A++ EG+++K + D+TY P +R NW K K D ++LD
Sbjct: 416 VTDDPDEIEAIDADALETGHEGIMLK--NPDSTYSPGRRGKNWQKRKPDV-----ETLDC 468
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
V A G G+R G F L+ D ++ +++ K+ TG ++
Sbjct: 469 VVTGAEWGEGRRATFLGTFELSVRDGDD--LEAVGKVATGITD 509
>gi|45358533|ref|NP_988090.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus maripaludis S2]
gi|56748697|sp|Q6LYM1.1|DNLI_METMP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|44921291|emb|CAF30526.1| ATP-dependent DNA ligase [Methanococcus maripaludis S2]
Length = 573
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 246/523 (47%), Gaps = 60/523 (11%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMET-TPEDLVPVVYLAANKIAPAHEGLELGIGDAS 257
+ D I T R+ TD ++ + + PE+L V + ++ E E+GIG
Sbjct: 9 ILDKIEKTTKRLEKTDYFVELIDFIKTSEKPENLKQVSQITIGRVFAEFENKEIGIGPNL 68
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLGL-VAKASRSSQSMMRKPDPLTITKVFDTFRLIA 316
+++A+ + G E +K + +E GD+G V S + + + LT+ +V+ T + ++
Sbjct: 69 LLEAV-KTTGIPEKDLKSKIKETGDIGTAVENLSSNIKQVSLFSQALTLEEVYSTLKKLS 127
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
+ G SQ+KK I LL+ A E +Y+ RL+ +RIG+ T+LA+ N+
Sbjct: 128 EIEGNSSQKKKTRIISNLLILADPVESRYISRLILEDMRIGMNIPTILASFSNYFNVNK- 186
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI--PIGP 434
E KI + + EK++ ++ N + PI P
Sbjct: 187 ------------ESVEKIYAVTNDIGLLGEKLISG------SDIENDPELKLKVFRPIKP 228
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLA+ T + + + + + +F E KYDG R Q+H +G V+IYSR E T P++
Sbjct: 229 MLAQLTPSIEDAMIETKMPQF--ETKYDGARVQVHK-SNGDVKIYSRRLENITNSVPEL- 284
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAF 552
V +KK + + +L+ E VA D + K PFQ + R R+ ++ + K+ + IY F
Sbjct: 285 --VEEIKKLDIDNIILEGECVAMDLDSGKPRPFQDILRRFRRKYNIDKMAEKIALRIYFF 342
Query: 553 DILYRNGQPLLQEQLRVRREHL--------YDS---------FEEEPGFFQFATTLTSID 595
D+LY N + L+ L+ RRE L +DS F + F F L S D
Sbjct: 343 DVLYYN-RGLIDTPLKTRREILEKLFGTNNWDSELEKIKKEIFSSKMLFSSFK--LNSGD 399
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
+ +++F + ++ EG++IK + DA Y P R K+K ++LD+V
Sbjct: 400 PNLVKEFFNWSLSIGHEGIMIK--NPDAPYTPGSRVKTMYKVKPTL-----ENLDVVVTR 452
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
A G GKR YG++ L+ D N+ I +G+G +E LE
Sbjct: 453 AKIGMGKRKDWYGSYELSVKD-NDGNLHVIGNVGSGLTEDDLE 494
>gi|402578899|gb|EJW72852.1| hypothetical protein WUBG_16242, partial [Wuchereria bancrofti]
Length = 152
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 98/147 (66%), Gaps = 1/147 (0%)
Query: 390 EAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
E +++ +S P YEK+V A+L DG+ L C TPGIP+ PMLA PTKG++E++ +
Sbjct: 7 EDVLLLRSTYSECPDYEKVVAAVLNDGLSKLPEKCKITPGIPVKPMLAHPTKGIAEVLKR 66
Query: 450 FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFV 509
F F CE+KYDGERAQIHY G ++I+SRN E NT K+PD+ + ++ SF+
Sbjct: 67 FGGSVFACEFKYDGERAQIHYDSSG-IKIFSRNQENNTDKYPDLKELLKQIMDEETTSFI 125
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARK 536
+D EIVA+D + ILPFQ LSTR RK
Sbjct: 126 IDSEIVAFDPIHETILPFQILSTRKRK 152
>gi|448540827|ref|ZP_21623748.1| DNA ligase, ATP dependent [Haloferax sp. ATCC BAA-646]
gi|448549219|ref|ZP_21627908.1| DNA ligase, ATP dependent [Haloferax sp. ATCC BAA-645]
gi|448555583|ref|ZP_21631623.1| DNA ligase, ATP dependent [Haloferax sp. ATCC BAA-644]
gi|445708980|gb|ELZ60815.1| DNA ligase, ATP dependent [Haloferax sp. ATCC BAA-646]
gi|445713282|gb|ELZ65060.1| DNA ligase, ATP dependent [Haloferax sp. ATCC BAA-645]
gi|445718328|gb|ELZ70031.1| DNA ligase, ATP dependent [Haloferax sp. ATCC BAA-644]
Length = 585
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 149/537 (27%), Positives = 242/537 (45%), Gaps = 44/537 (8%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHV 273
V ++L + +DL V ++ PA + L IG +A+A A G + V
Sbjct: 22 VVSLLSDLFSDAGDDLPTVARFVQGRVFPAWDSTTLDIGPRLCHEAIARAAGPNVSADDV 81
Query: 274 KKQYQEMGDLGLVAKA-SRSSQSMMRK-----PDPLTITKVFDTFRLIAKEAGKDSQEKK 327
+ + + G++G VA + Q + D LT+ +V R +A +G S+E K
Sbjct: 82 EDRLADRGEIGAVAASYDFGGQRGLAAFGSGGQDGLTVAEVDSELRGLAAASGSGSEETK 141
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY----------NEQH 377
+ L E ++L RL+ S++RIG+ E T+ A+ +A + ++
Sbjct: 142 LKTLYGLFNRTDPDEARFLARLVLSEMRIGVGEGTVRDAVAEAFLVAPADAAAIRDDDAD 201
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
S+ + EA V + V Y + +G L + G P+ MLA
Sbjct: 202 SETEAAARERRNEAIAAVARALQVSNDYGMVAGLARDEGEAGL-DGVRLEVGRPVQAMLA 260
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ ++ ++++ E K+DG R Q+H DG V ++SRN E T P+VV V
Sbjct: 261 QAGT-AADALDEWGTA--AVETKFDGARVQVHRDADGEVSLFSRNMEDVTDALPEVVEFV 317
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDIL 555
+ +V +LD E+VA D + + LPFQ + R R+ + ++ + V + AFD L
Sbjct: 318 ADAVDEAV---ILDGEVVAMDDDGEP-LPFQEILRRFRRKHDVGRMREEIRVELRAFDCL 373
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLI 615
+ G LL + L R + L + + L + D DEI A+DA EG++
Sbjct: 374 HAAGDDLLTDPLSARHDRLTAVLGGDSA--AVSDLLLTDDPDEIAASEADALDAGHEGIM 431
Query: 616 IKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY 675
+K DA Y P R NWLK K D ++LDLV A G G+R G FLL+
Sbjct: 432 LKNP--DAPYSPGDRGKNWLKRKPDV-----ETLDLVVTGAEWGEGRRAEFLGTFLLSVR 484
Query: 676 ---DSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
+S ++ F++I K+ TG ++ L E + L ++ R + D I P V FE
Sbjct: 485 VESESGDDAFETIGKVATGITDEELAELTDLLEPEI---ERESGKEVD-IRPSVVFE 537
>gi|448340174|ref|ZP_21529148.1| DNA ligase I, ATP-dependent Dnl1 [Natrinema gari JCM 14663]
gi|445630958|gb|ELY84216.1| DNA ligase I, ATP-dependent Dnl1 [Natrinema gari JCM 14663]
Length = 585
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 235/524 (44%), Gaps = 73/524 (13%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES--HV 273
V +R + DL V ++ PA + L IG ++ +A+A A G S V
Sbjct: 22 VVAHVRDLFADAGSDLEVVARFVQGRVFPAWDSTTLDIGPSACYEAIARAAGTNVSSDDV 81
Query: 274 KKQYQEMGDLGLVAK---------ASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
+ + E+G++G VA + LT+ +V +T IA G SQ
Sbjct: 82 EARLAEVGEIGDVAANYDFGGQQGLGAFTGGGGGNGGNLTVREVHETLEDIAAAEGSGSQ 141
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI 384
++K + + L + E +YL R++ S++RIG+ E T+ A+ +A
Sbjct: 142 DRKVDLLFGLFNRCSSEEARYLARIVLSEMRIGVGEGTVRDAIAEA-------------F 188
Query: 385 QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVS 444
P + V++ V Y ++ DG+ L +T G P+ MLA+ T V+
Sbjct: 189 DVPTDR----VERALQVSNDYGQVARTARDDGLEGLDST-ELEVGRPVQAMLAQ-TGTVT 242
Query: 445 EIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE------IYSRNAERNTGKFPDVV-LAV 497
+ + +++ E+KYDG R Q+H+ + S E ++SRN E T P+VV A
Sbjct: 243 DALEEWETA--GVEWKYDGARIQLHHAPNRSNESTAETRVFSRNMEEVTDALPEVVEFAA 300
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDIL 555
+ L++P+ +LD E+VA D E LPFQ + R R+ ++ + DV + FD L
Sbjct: 301 AHLEEPA----ILDGEVVAID-EDGSPLPFQEVLKRFRRKHDVAKAREDVSVRPVFFDCL 355
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL-------DEIQKFLDAAVD 608
+ G+ LL E L R + L + + + L DEI+ A++
Sbjct: 356 HAGGEDLLAEPLTTRHDRLRSVLVDADADPVADDEIEGLSLLWRTDDPDEIESIAAEALE 415
Query: 609 ASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
A EG+++K + D+TY P +R +W K K D ++LD V A G G+R V G
Sbjct: 416 AGHEGIMLK--NPDSTYSPGRRGKHWRKRKPDV-----ETLDCVVTGAEWGEGRRATVLG 468
Query: 669 AFLLACYDSNNEE-------------FQSICKIGTGFSEAMLEE 699
F LA ++ E +++ K+ TG ++ LEE
Sbjct: 469 TFELAVRTGDDSEERRSAGSAVEPQNLETVGKVATGITDEKLEE 512
>gi|448311793|ref|ZP_21501546.1| ATP-dependent DNA ligase I [Natronolimnobius innermongolicus JCM
12255]
gi|445603414|gb|ELY57376.1| ATP-dependent DNA ligase I [Natronolimnobius innermongolicus JCM
12255]
Length = 581
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 231/503 (45%), Gaps = 66/503 (13%)
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHVKKQYQEMGDLGLVA 287
DL V ++ PA + L IG ++ +A+A A G V+++ E+G++G VA
Sbjct: 36 DLEVVARFVQGRVFPAWDSTTLDIGPSTCYEAIARAAGPNVGGDDVEERLAEVGEIGAVA 95
Query: 288 KA----------------SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRI 331
A LT+ +V +T +A G SQ++K + +
Sbjct: 96 AAYDFGGQRGLGAFTGGGGGDESGENGNGGDLTVNEVAETLADLAATEGSGSQDRKVDLL 155
Query: 332 KALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEA 391
L + E +YL RL+ S++RIG+ E T+ A+G+A P +Q L+
Sbjct: 156 FGLFNRCSSEEARYLARLVLSEMRIGVGEGTVRDAIGEA------FDVPTDRVQRALQ-- 207
Query: 392 AKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQ 451
V Y ++ +G+ L + G P+ MLA+ V+E + ++
Sbjct: 208 ---------VSNNYGQVARVARDEGIDGL-DAMDLEVGRPVQAMLAQAGT-VTEALEEWD 256
Query: 452 DMEFTCEYKYDGERAQIHYLEDGSVE----IYSRNAERNTGKFPDVVLAVSRLKKPSVRS 507
E E+KYDG R Q+H+ DG E ++SRN E T P+VV +R + S
Sbjct: 257 --EAAVEWKYDGARIQLHHRVDGDGESETSVFSRNMEDVTAALPEVVEYAARTLEESA-- 312
Query: 508 FVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILYRNGQPLLQE 565
+LD E+VA D + LPFQ + R R+ ++ + DV + FD L+ +G LL E
Sbjct: 313 -ILDGEVVAIDADGSP-LPFQEVLKRFRRKHDVAKAREDVTVRPVFFDCLHADGDDLLAE 370
Query: 566 QLRVRREHL-----YDSFEE---EPGFFQFATTLTSIDLDEIQKFLDA-AVDASCEGLII 616
L R + L DS E +P + + L D E + +DA A+++ EG+++
Sbjct: 371 PLTARHDRLESLLAADSDSEPDPDPADVEGLSLLWLTDDPEEIEAIDADALESGHEGIML 430
Query: 617 KTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYD 676
K D D+TY P +R +W K K D ++LD + A G G+R G F L+
Sbjct: 431 K--DPDSTYSPGRRGKHWRKRKPDV-----ETLDCIVTGAEWGEGRRATFLGTFELSVRA 483
Query: 677 SN-NEEFQSICKIGTGFSEAMLE 698
+ ++ +++ K+ TG ++ LE
Sbjct: 484 GDAGDDLETVGKVATGITDEKLE 506
>gi|292655715|ref|YP_003535612.1| DNA ligase, ATP dependent [Haloferax volcanii DS2]
gi|448289699|ref|ZP_21480863.1| DNA ligase, ATP dependent [Haloferax volcanii DS2]
gi|291370462|gb|ADE02689.1| DNA ligase, ATP dependent [Haloferax volcanii DS2]
gi|445581432|gb|ELY35790.1| DNA ligase, ATP dependent [Haloferax volcanii DS2]
Length = 585
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 151/538 (28%), Positives = 243/538 (45%), Gaps = 46/538 (8%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHV 273
V ++L + +DL V ++ PA + L IG +A+A A G + V
Sbjct: 22 VVSLLSDLFSDAGDDLPTVARFVQGRVFPAWDSTTLDIGPRLCHEAIARAAGPNVSADDV 81
Query: 274 KKQYQEMGDLGLVAKA-SRSSQSMMR-----KPDPLTITKVFDTFRLIAKEAGKDSQEKK 327
+ + + G++G VA + Q + + D LT+ +V R +A +G S+E K
Sbjct: 82 EDRLADRGEIGAVAASYDFGGQRGLAAFGSGEQDGLTVAEVDSELRALAAASGSGSEETK 141
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY----------NEQH 377
+ L E ++L RL+ S++RIG+ E T+ A+ +A + ++
Sbjct: 142 LKTLYGLFNRTDPDEARFLARLVLSEMRIGVGEGTVRDAVAEAFLVAPADAAAIRDDDAD 201
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
++ + EA V + V Y + +G L + G P+ MLA
Sbjct: 202 AETEAAARERRNEAIAAVARALQVSNDYGMVAGLARDEGEAGL-DGVRLEVGRPVQAMLA 260
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ ++ + ++ E K+DG R Q+H DG V ++SRN E T P+VV V
Sbjct: 261 QAGT-AADALGEWGTA--AVETKFDGARVQVHRDADGEVSLFSRNMEDVTDALPEVVEFV 317
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDIL 555
+ V +LD E+VA D + + LPFQ + R R+ + ++ V V + AFD L
Sbjct: 318 AGAVDDPV---ILDGEVVAMD-DGGEPLPFQEILRRFRRKHDVDRMREEVRVELRAFDCL 373
Query: 556 YRNGQPLLQEQLRVRREHLYDSF-EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGL 614
+ G LL + L R + L ++ P L S D DEI + A+DA EG+
Sbjct: 374 HAAGDDLLADPLAARHDRLTALLGDDSPAVSDL---LLSDDPDEIAAYEADALDAGHEGI 430
Query: 615 IIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLAC 674
++K DA Y P R NWLK K D ++LDLV A G G+R G FLL+
Sbjct: 431 MLKNP--DAPYSPGDRGKNWLKRKPDV-----ETLDLVVTGAEWGEGRRAEFLGTFLLSA 483
Query: 675 ---YDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
+S ++ F++I K+ TG ++ L E + L ++ R + D I P V FE
Sbjct: 484 RVEAESGDDAFETIGKVATGITDEELAELTDLLEPEI---EREAGKEVD-IRPSVVFE 537
>gi|390365532|ref|XP_786357.3| PREDICTED: DNA ligase 3 [Strongylocentrotus purpuratus]
Length = 974
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 213/445 (47%), Gaps = 57/445 (12%)
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ K D ++ KE Q+++ +I A + + ++RLL+ LRI + +L
Sbjct: 393 VDKFLDNMSMMTKEL---EQQRELAKITGKCTAN---DLKMVVRLLKHDLRISSGAKHIL 446
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
AL PN + + ++ V VL + ++GV ++
Sbjct: 447 DAL-------------DPNAYEAFQASRDLLDVVSRVLANQK------ASNGVPGMTKKL 487
Query: 425 SFTPGI--PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
S + P+ PMLA+ K V + K + + E KYDGER QIH D + + +SR+
Sbjct: 488 SVRAALMTPVLPMLAEACKSVEMGMRKCPNGMY-AEIKYDGERVQIHKQGD-NFQYFSRS 545
Query: 483 AERNTGKFPDVVLAVSRLKK------PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
+ P + V+ +K P S +LD EI+ D++ KILPF TL K
Sbjct: 546 LK------PVLPHKVTHIKDWIPKACPHGNSLILDSEILMVDKD-GKILPFGTLG--VHK 596
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+ D +VC++ FD L+ NG+ L+ + L+ RR+ L ++ +E P + +
Sbjct: 597 KSAFQD--ANVCLFVFDCLHFNGEDLMDKPLKTRRKILEENLDEIPNRIMLSESKFVTKT 654
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPI 654
++ + + EGL++K D + YEP KR +WLK+KKDY++ S+ DS DL+ +
Sbjct: 655 RQLSGLIADVIREGLEGLVLK--DVQSLYEPGKR--HWLKVKKDYLKEGSMADSADLLVL 710
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLR----SKVIP 710
AF+G G + G+ FL+ YD N++ F+++ K G G + +++ + L SK
Sbjct: 711 GAFYGTGTKGGMMSVFLMGVYDPNSDSFRTVTKCGNGLDDNTMDKVNRDLDMVKISKDSS 770
Query: 711 KPRPYYRFADTISPD-VWFEPTERP 734
K + R T+ PD V EP + P
Sbjct: 771 KVPSWLRVNKTLVPDFVIREPKKAP 795
>gi|448562310|ref|ZP_21635349.1| DNA ligase, ATP dependent [Haloferax prahovense DSM 18310]
gi|445719514|gb|ELZ71194.1| DNA ligase, ATP dependent [Haloferax prahovense DSM 18310]
Length = 585
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 149/540 (27%), Positives = 242/540 (44%), Gaps = 50/540 (9%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHV 273
V ++L + +DL V ++ PA + L IG +A+A A G + V
Sbjct: 22 VVSLLSDLFSDAGDDLPTVARFVQGRVFPAWDSTTLDIGPRLCHEAIARAAGPNVSADDV 81
Query: 274 KKQYQEMGDLGLVA--------KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQE 325
+ + + G++G VA + + S R LT+ +V R +A +G S+E
Sbjct: 82 EDRLADRGEIGAVAASYDFGGQRGLAAFGSGGRAG--LTVAEVDSELRALAAASGSGSEE 139
Query: 326 KKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQ 385
K + L E + L RL+ S++RIG+ E + A+ +A + + + +
Sbjct: 140 TKLKTLYGLFNRTDPDEARILARLVLSEMRIGVGEGAVRDAVAEAFLVDPADAAAIRDDD 199
Query: 386 SPLE----------EAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPM 435
+ E EA V + V Y + +G L + G P+ M
Sbjct: 200 ADAETEAVARDRRNEAVAAVARALQVSNDYGMVAELARDEGEAGL-DGVRLEVGRPVQAM 258
Query: 436 LAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV- 494
LA+ ++ ++++ E K+DG R Q+H DG V ++SRN E TG P+VV
Sbjct: 259 LAQAGT-AADALDEWD--AAAVETKFDGARVQVHRDADGEVSLFSRNMEDVTGALPEVVE 315
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAF 552
+ +P+ +LD E+VA D + + LPFQ + R R+ + ++ V V + AF
Sbjct: 316 FVADAVDEPA----ILDGEVVAMDDDGEP-LPFQEILRRFRRKHDVGRMREEVRVELRAF 370
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCE 612
D L+ G LL + L R + L ++ + L + D DEI A+DA E
Sbjct: 371 DCLHAGGDDLLTDPLSDRHDRLAAVLGDDSA--AVSDLLLTDDADEIAASEADALDAGHE 428
Query: 613 GLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLL 672
G+++K DA Y P R NWLK K D ++LDLV A G G+R G FLL
Sbjct: 429 GIMLKNP--DAPYSPGDRGKNWLKRKPDV-----ETLDLVVTGAEWGEGRRAEFLGTFLL 481
Query: 673 AC---YDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
+ +S ++ F++I K+ TG ++ L E + L ++ R + D I P V FE
Sbjct: 482 SARVEAESGDDAFETIGKVATGITDEELAELTDLLEPEI---ERESGKEVD-IRPSVVFE 537
>gi|397772545|ref|YP_006540091.1| DNA ligase I, ATP-dependent Dnl1 [Natrinema sp. J7-2]
gi|397681638|gb|AFO56015.1| DNA ligase I, ATP-dependent Dnl1 [Natrinema sp. J7-2]
Length = 585
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 235/524 (44%), Gaps = 73/524 (13%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES--HV 273
V +R + DL V ++ PA + L IG ++ +A+A A G S V
Sbjct: 22 VVAHVRDLFADAGSDLEVVARFVQGRVFPAWDSTTLDIGPSACYEAIARAAGTNVSSDDV 81
Query: 274 KKQYQEMGDLGLVAK---------ASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
+ + E+G++G VA + LT+ +V +T IA G SQ
Sbjct: 82 EARLAEVGEIGDVAANYDFGGQQGLGAFTGGGGGNGGNLTVREVHETLEDIAAAEGSGSQ 141
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI 384
++K + + L + E +YL R++ S++RIG+ E T+ A+ +A
Sbjct: 142 DRKVDLLFGLFNRCSSEEARYLARIVLSEMRIGVGEGTVRDAIAEA-------------F 188
Query: 385 QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVS 444
P + V++ V Y ++ DG+ L +T G P+ MLA+ T V+
Sbjct: 189 DVPTDR----VERALQVSNDYGQVARIARDDGLEGLDST-ELEVGRPVQAMLAQ-TGTVT 242
Query: 445 EIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE------IYSRNAERNTGKFPDVV-LAV 497
+ + +++ E+KYDG R Q+H+ + S E ++SRN E T P+VV A
Sbjct: 243 DALEEWETA--GVEWKYDGARIQLHHAPNRSNESTAETRVFSRNMEEVTDALPEVVEFAA 300
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDIL 555
+ L++P+ +LD E+VA D E LPFQ + R R+ ++ + DV + FD L
Sbjct: 301 AHLEEPA----ILDGEVVAID-EDGSPLPFQEVLKRFRRKHDVAKAREDVSVRPVFFDCL 355
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL-------DEIQKFLDAAVD 608
+ G+ LL E L R + L + + + L DEI+ A++
Sbjct: 356 HAGGEDLLAEPLTTRHDRLRSVLVDADADPVADDEIEGLSLLWRTDDPDEIESIAAEALE 415
Query: 609 ASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
A EG+++K + D+TY P +R +W K K D ++LD V A G G+R V G
Sbjct: 416 AGHEGIMLK--NPDSTYSPGRRGKHWRKRKPDV-----ETLDCVVTGAEWGEGRRATVLG 468
Query: 669 AFLLACYDSNNEE-------------FQSICKIGTGFSEAMLEE 699
F LA ++ E +++ K+ TG ++ LEE
Sbjct: 469 TFELAVRTGDDSEERRSAGSAVEPQNLETVGKVATGITDEKLEE 512
>gi|449670179|ref|XP_004207211.1| PREDICTED: DNA ligase 3-like [Hydra magnipapillata]
Length = 759
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 198/393 (50%), Gaps = 36/393 (9%)
Query: 326 KKKNRIKALLVAATDCEPQ---YLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPP 382
K++ +IK L C + ++I+L++ LR+ + AL +A Q S
Sbjct: 134 KEEAQIKVLTKICKRCTAENLCFIIKLIKHDLRMNTGPKHFFDALDSSAYALFQAS---S 190
Query: 383 NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKG 442
+++S +E+ ++ L EK L+ G NL + + PI PMLA K
Sbjct: 191 DLKSVIEK--------WTQLNSEEK-----LSSGTKNLL-SIETSVMTPIKPMLADACKS 236
Query: 443 VSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAER-NTGKFPDVVLAVSRL 500
+ + + K + ++ E KYDGER Q+H ++G+ E YSR+ + K D+ + +
Sbjct: 237 IEQAIKKCPNGMYS-EIKYDGERVQVH--KNGNKFEYYSRSLKSVQPHKIADITHYLPQ- 292
Query: 501 KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQ 560
P + +LD E++ D K LPF TLS + + + VC FDIL N +
Sbjct: 293 ACPGGDTLILDGEVLLMDTNTNKPLPFGTLSIHKKSKFA----EATVCYVIFDILQFNSE 348
Query: 561 PLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMD 620
LL+ L RRE L + +E G F+ DE+Q L + EGL+IK D
Sbjct: 349 SLLKRPLCERREILCKNVKEIKGRIVFSEMKEITKSDELQCQLKKVFSENLEGLVIK--D 406
Query: 621 RDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSN 678
+ YEP KR +WLK+KKDY++ ++ D+ DLV + A++G G + G+ FL+ CYD +
Sbjct: 407 IKSIYEPGKR--HWLKIKKDYLQDGAMADTADLVVLGAYYGTGNKGGMMSVFLMGCYDPD 464
Query: 679 NEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
+++ ++ K G GF + +++ SSL+ K I K
Sbjct: 465 QKKWLTVAKCGNGFDDDTIKKLQSSLQMKKISK 497
>gi|433591463|ref|YP_007280959.1| ATP-dependent DNA ligase I [Natrinema pellirubrum DSM 15624]
gi|448332860|ref|ZP_21522080.1| DNA ligase I, ATP-dependent Dnl1 [Natrinema pellirubrum DSM 15624]
gi|433306243|gb|AGB32055.1| ATP-dependent DNA ligase I [Natrinema pellirubrum DSM 15624]
gi|445624704|gb|ELY78079.1| DNA ligase I, ATP-dependent Dnl1 [Natrinema pellirubrum DSM 15624]
Length = 577
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 144/532 (27%), Positives = 249/532 (46%), Gaps = 72/532 (13%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES--HV 273
+ +R ++ +++ V ++ PA + L IG ++ +A+A A G+ S V
Sbjct: 22 IVAHVRDLLAAADDEIEVVARFVQGRVFPAWDSTTLDIGPSACYEAIARAAGQNVSSDDV 81
Query: 274 KKQYQEMGDLGLVAKASR--SSQSM-------MRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
+ + ++G++G VA + Q + D LT+ +V DT +A G S
Sbjct: 82 EDRLADVGEIGDVAASYEFGGQQGLGAFTDGDGGTGDDLTVREVADTLTELAAAEGSGSH 141
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI 384
++K + + L A+ E +YL RL+ S++RIG+ E T+ A+ A E
Sbjct: 142 DRKVDLLFGLFNRASSEEARYLARLVLSEMRIGVGEGTVRDAIAAAFEVPEDR------- 194
Query: 385 QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVS 444
V++ V Y ++ +GV L +T G P+ MLA+ V+
Sbjct: 195 ----------VERALQVSNDYGRVARIARDEGVVGL-DTMDLAVGRPVQAMLAQAGT-VT 242
Query: 445 EIVNKFQDMEFTCEYKYDGERAQIHY----LEDG---SVE--IYSRNAERNTGKFPDVV- 494
+ + ++ E+KYDG R Q+H+ ++DG +VE ++SRN E T P+VV
Sbjct: 243 DALEEWGTA--AVEWKYDGARIQLHHDPAGMDDGDGSTVETRVFSRNMEDVTDALPEVVE 300
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAF 552
A L+ P+ +LD E+VA D + LPFQ + R R+ ++ + +V + F
Sbjct: 301 FAAETLEAPA----ILDGEVVAVDDDGSP-LPFQEVLKRFRRKHDVAKARENVSVRPVFF 355
Query: 553 DILYRNGQPLLQEQLRVRREHLY-------------DSFEEEPGFFQFATTLTSIDLDEI 599
D L+ +G+ LL + L R + L D+ +E + T+ D DEI
Sbjct: 356 DCLHADGEDLLADPLTTRHDRLRSVLVDSGADGDAGDAVADED-IEGLSLLWTTDDPDEI 414
Query: 600 QKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
+ A++A EG+++K D ++TY P +R +W K K D +E+I D V A G
Sbjct: 415 ESIDADALEAGHEGIMLK--DPESTYSPGRRGKHWRKRKPD-VETI----DCVVTGAEWG 467
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
G+R G F LA +EF+++ K+ TG ++ LEE + L ++ +
Sbjct: 468 EGRRATFLGTFELAV--RAGDEFETVGKVATGITDEKLEELTDLLEPHIVAE 517
>gi|385804030|ref|YP_005840430.1| DNA ligase (ATP) [Haloquadratum walsbyi C23]
gi|339729522|emb|CCC40785.1| DNA ligase (ATP) [Haloquadratum walsbyi C23]
Length = 618
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 161/591 (27%), Positives = 259/591 (43%), Gaps = 76/591 (12%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I E+ + IT +V +L T + L VV + PA L IG A + +
Sbjct: 13 IEAESADLEITSLVSKLLTTAGNMDDKTLSIVVRFIKGTVFPAWSSQTLDIGPALLHTTI 72
Query: 263 AEACGRT--ESHVKKQYQEMGDLGLVAKA-SRSSQSMMRK-----PDPLTITKVFDTFRL 314
A+A G + V+ + E G++G VA + + Q + PD LT+ V T R
Sbjct: 73 AQAAGPNVDSADVENRLAEYGEIGAVAASYDLNGQQGLSAFTPSTPDSLTVGHVDKTLRA 132
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL------- 367
+A +G S+ +++N + L A+ E + L RL+ ++RIG+ T+ A+
Sbjct: 133 VASASGDGSESRRRNLLFGLFSQASSSEARVLARLILGEMRIGVGTGTVRDAIISGFIEP 192
Query: 368 ---------------------GQAAVYNEQHSKPPPNIQSPLE------------EAAKI 394
Q + N+ PN ++ + + +
Sbjct: 193 AADADKKTLESREDAESVPPASQPEMTNKISGDTSPNTSESVQTKESDPDTSSNVDPSAV 252
Query: 395 VKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDME 454
V++ V Y + G L + S G PI MLA+ GV + V+ +
Sbjct: 253 VERALQVSNDYGMVATIARNQGQAGLID-ISLEVGRPIQAMLAQAADGV-DAVDTWD--A 308
Query: 455 FTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCE 513
E K+DG R QIH DG SV +YSRN E T P++V +S +K +V + +LD E
Sbjct: 309 VAIETKFDGARVQIHT--DGESVSLYSRNMEDVTDPLPEIVEFIS--QKVTVPA-ILDAE 363
Query: 514 IVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDILYRNGQPLLQEQLRVRR 571
+VA + L FQ + R R+ + ++ V++ +Y FD L+ + LL LR RR
Sbjct: 364 VVAVSDDDDP-LAFQEVLRRFRRKYDIDAMRESVNLNVYVFDCLHIDDADLLDIPLRERR 422
Query: 572 EHLYDSFEEEPGF--FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSK 629
E L + F FQ T D + I + A+ EG+++K D D+TY P
Sbjct: 423 ERLRELFNTTDALSPFQLTT-----DPNVIAQARSKALSNGHEGVMLK--DPDSTYNPGS 475
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNE-EFQSICKI 688
R +WLK K D ++LDLV A G G+R V+G F+++ + +E +F S+ K+
Sbjct: 476 RGQHWLKHKPDV-----ETLDLVVTGAEWGEGRRANVFGTFVVSARTTADEQQFNSLGKV 530
Query: 689 GTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNS 739
TG ++ L + LR V + I +V +E +R T +S
Sbjct: 531 ATGLTDDQLTTLTEQLRPHVRSEDGQTVMIEPAIVVEVGYEEIQRSPTYDS 581
>gi|195445000|ref|XP_002070126.1| GK11194 [Drosophila willistoni]
gi|194166211|gb|EDW81112.1| GK11194 [Drosophila willistoni]
Length = 796
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 214/463 (46%), Gaps = 44/463 (9%)
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF-- 309
+ + ++IK + ++ ++ ++ GD V++ R + K P T +K++
Sbjct: 69 NLQNKALIKLFSRILNSDQNQMQLDLEQDGD---VSETLRKHFAASAKLKPQTQSKLYLQ 125
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
+ L+ + K ++ + +K L AT+ + + IRL++ LRI + +L A G
Sbjct: 126 EVDELLRQLEQKTKEDDQTELLKELCKKATELDLRTFIRLIKQDLRINARARHILDAFGP 185
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A P QS + A IV+Q + PA + T +
Sbjct: 186 LAY---------PAYQSSRDLTA-IVQQFAGKAVKTQAKSPAKKLK-----TTTSAIQVM 230
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
PI PMLA K V E K F E KYDGER QIH + + +SRN +
Sbjct: 231 TPISPMLANACKSVEEAFKKNPAGLFG-EVKYDGERVQIHK-KGKEFKFFSRNLK----- 283
Query: 490 FPDVVLAVSRLKK------PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
P + + RL + P +LD EI+ D E +LPF TL + +
Sbjct: 284 -PVMDHKIKRLTEYIPRAFPGAGDMILDSEIILVDTETGALLPFGTLGAHKKHEYA---- 338
Query: 544 KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFL 603
VC++ FD + +G+ L+Q + R RRE L + E + Q + + E+
Sbjct: 339 NASVCLFVFDCILYDGEDLMQLEFRKRREILEQNIEPIKSYVQLSESQFLKTKSELAMMT 398
Query: 604 DAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRG 661
+ A+ EG+++K + + TY+P KR NWLK+KKDY+ + D+ DLV + A++G G
Sbjct: 399 AKVLQANLEGVVLK--NPNGTYQPGKR--NWLKVKKDYLFDGKMADTADLVVLGAWYGSG 454
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
K+ GV FL+ CYD + ++++ K+ +G ++ +E +L
Sbjct: 455 KKGGVLSIFLMGCYDPKDRLWKTVTKVHSGLDDSTNDEIHENL 497
>gi|448348531|ref|ZP_21537380.1| ATP-dependent DNA ligase I [Natrialba taiwanensis DSM 12281]
gi|445642898|gb|ELY95960.1| ATP-dependent DNA ligase I [Natrialba taiwanensis DSM 12281]
Length = 576
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 139/514 (27%), Positives = 224/514 (43%), Gaps = 70/514 (13%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRT--ESHV 273
+ +R + +DL V ++ PA + L IG + +A+A A G V
Sbjct: 22 IVAHVRDLFADAGDDLPVVARFVQGRVFPAWDSTTLDIGPNTCYEAIARAAGTNVDADDV 81
Query: 274 KKQYQEMGDLGLVAKA-------------SRSSQSMMRKPDPLTITKVFDTFRLIAKEAG 320
+K+ E G++G VA + S LT+ +V DT +A G
Sbjct: 82 EKRLAERGEIGDVAASYDFGGQQGLGAFTGGGGDSTGSSGGDLTVREVDDTLTELAAAEG 141
Query: 321 KDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKP 380
SQ++K + + L + E +YL RL+ S++RIG+ E T+ A+ +A P
Sbjct: 142 AGSQDRKVDLLFGLFNRCSSSEARYLARLVLSEMRIGVGEGTVRDAIAEA------FDAP 195
Query: 381 PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPT 440
++ L+ V Y ++ +GV L + G P+ MLA+
Sbjct: 196 EDRVERALQ-----------VSNDYGQVAQVACDEGVSGL-DEIELELGRPVQAMLAQAG 243
Query: 441 KGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV-LAVSR 499
V++ + ++ E E+KYDG R Q+H+ DG ++SRN E T P+VV A
Sbjct: 244 T-VTDALEEWD--EAGVEWKYDGARIQLHHDPDGQTRVFSRNMEEVTDALPEVVEFAAET 300
Query: 500 LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILYR 557
L +P +LD E+VA D E + LPFQ + R R+ ++ + DV + FD L+
Sbjct: 301 LDEP----VILDGEVVAID-EDENPLPFQEVLKRFRRKHDVAKAREDVSVRPVFFDCLHA 355
Query: 558 NGQPLLQEQLRVRREHLYDSFEEEPGFFQ-----------------FATTLTSIDLDEIQ 600
G LL+ L R E L PG Q + + D DEI+
Sbjct: 356 GGTDLLEAPLTSRHERLELVLAAGPGQPQDRDQDQNQDQDSAEIDGLSLLWLTDDPDEIE 415
Query: 601 KFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
A+ A EG+++K ++ Y P +R NW K K D ++LD V A G
Sbjct: 416 AIDADALTAGHEGIMLKNP--ESAYSPGRRGKNWRKRKPDV-----ETLDCVVTGAEWGE 468
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
G+R G F L+ D ++ +++ K+ TG ++
Sbjct: 469 GRRATFLGTFELSVRDGDD--LETVGKVATGITD 500
>gi|324502106|gb|ADY40927.1| DNA ligase 3 [Ascaris suum]
Length = 913
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 154/662 (23%), Positives = 289/662 (43%), Gaps = 77/662 (11%)
Query: 66 SAAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISN 125
S+ K++ S + + S SS K++ ++ K + +E E N+ P ++
Sbjct: 128 SSKKKREDSSKKHLSRGSSEHKEKGKGESAEKKGSKKERTTTTKEQEESGGNE-ESPGTS 186
Query: 126 QIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKAGEFDPKMVACW 185
+ + D +K P+KRKV EK+AE + KK+ + + V
Sbjct: 187 GLSDKTDKKKR-------PEKRKV--------EKVAESRGKEEERKKRKMDMKEENVKSE 231
Query: 186 EKGERVP----FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANK 241
++ + F L V +S T + ++ N + D++ +V +
Sbjct: 232 KRYSKFDSFKLFCKLCEVLASVSKYTDKSTAVNMFVNK-----DGYDGDMLLLVRM---- 282
Query: 242 IAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD 301
+ P+ + + + +IK + G + + + + GD+ + + +
Sbjct: 283 LLPSTDQRVFNLKEKQLIKLFSNIFGWSPEELTDSFNQTGDVSVTIRQYFEKSIEDGRKS 342
Query: 302 PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQ 361
L++ V + + + +D Q++ N I AT E QY++RL++ LRI +
Sbjct: 343 HLSLQDVDNWLNRLTEYTKEDDQQRHLNSIAK---RATPLELQYILRLIKKDLRINAGAK 399
Query: 362 TLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLS 421
+L + + A Q+S+ +++S LE+ + + L D
Sbjct: 400 HILDGIKKGAYEAFQNSR---DLKSVLEKCQTLGSDT------------SFLIDS----- 439
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
T G P+ PMLA+P + V + + + F+ E KYDGER Q+H D + +SR
Sbjct: 440 ---GITLGTPVKPMLAEPCRSVEQAMKTCVNGMFS-EIKYDGERLQLHKSGD-TFTFFSR 494
Query: 482 N----AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
+ E DV+ P +LD E++ D K LPF TL ++
Sbjct: 495 SLRPVQEHKVSHLSDVIPQAF----PKGGDMILDAEVLLVDTATGKPLPFGTLGVHKKEQ 550
Query: 538 VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT--TLTSID 595
+ VC++ FD L +G+ L+ L+ R++ L ++ E P + + +
Sbjct: 551 FA----NALVCLFVFDCLLFDGKCLVDRPLKERKKILEENINEVPNRVLLSNYQLIRKNE 606
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES--IGDSLDLVP 653
D+++ + A+D EGL++K D ++ YEP KR +WLK+KKDY+E + D+ DL+
Sbjct: 607 HDKLKTMIWKAIDEGLEGLVLK--DLESVYEPGKR--HWLKVKKDYLEEGKMADTADLIV 662
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPR 713
+ A++G G + G+ FL+ YD + F ++ K G G +A L+ + L+ ++ R
Sbjct: 663 LGAYYGTGCKGGMMSVFLMGVYDEASNVFLTVTKCGNGHDDATLDRINKELQPRMRKIGR 722
Query: 714 PY 715
Y
Sbjct: 723 DY 724
>gi|361125044|gb|EHK97104.1| putative DNA ligase 1 [Glarea lozoyensis 74030]
Length = 487
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 129/232 (55%), Gaps = 17/232 (7%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W+ GE VP+ L F I T R++I LR V+ TP D++P V L NK+A
Sbjct: 255 WKPGEPVPYAALCTTFSFIEMTTKRLIIQAHCSLFLRQVLRLTPGDMLPTVLLMINKLAA 314
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ +K+ +E+GDLGLVA SR++Q M KP LT
Sbjct: 315 DYAGVELGIGESLIMKAIGETTGRSLPVIKQDQKEIGDLGLVAVKSRANQPTMFKPKALT 374
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
+ V IA +G +Q +K + IK LL AA E ++++R
Sbjct: 375 VQAVHRGLLGIATVSGNGAQARKVDGIKKLLAAADGHAAGKVDITKDKGGPSEAKFIVRF 434
Query: 350 LQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP--LEEAAKIVKQVF 399
L+ KLR+GLAE+T+L +LGQA V +E K + S L + I+KQVF
Sbjct: 435 LEGKLRLGLAEKTVLVSLGQAMVCHEIEKKGSGKVPSTEQLAKGESILKQVF 486
>gi|15790019|ref|NP_279843.1| DNA ligase [Halobacterium sp. NRC-1]
gi|169235742|ref|YP_001688942.1| DNA ligase (ATP) [Halobacterium salinarum R1]
gi|14423678|sp|Q9HR35.1|DNLI_HALSA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|224487884|sp|B0R4C9.1|DNLI_HALS3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|10580445|gb|AAG19323.1| DNA ligase [Halobacterium sp. NRC-1]
gi|167726808|emb|CAP13594.1| DNA ligase (ATP) [Halobacterium salinarum R1]
Length = 561
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 144/510 (28%), Positives = 228/510 (44%), Gaps = 54/510 (10%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRT--ESHV 273
V ++ + + DL V ++ PAH +L IG AL+ A GR +
Sbjct: 22 VVALVAELFDAADSDLDVVARFVQGRVFPAHSETKLDIGPQLCYTALSRAAGRNVDADDI 81
Query: 274 KKQYQEMGDLGLVAKA-SRSSQSMMR-------KPDPLTITKVFDTFRLIAKEAGKDSQE 325
+ + E GD+G VA + Q+ + D LT++ V D +A AG SQ
Sbjct: 82 EARLAETGDIGAVAGSLDLGGQTGLAAFGGGDDHADGLTVSGVADELAALAAAAGDGSQS 141
Query: 326 KKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQ 385
+K + L T E +YL RL+ ++RIG+ E + A+ +A P +Q
Sbjct: 142 EKVTLLFGLFNQCTSREARYLARLVLGEMRIGVGEGAVRDAIAEA------FDVPTAAVQ 195
Query: 386 SPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSE 445
L+ V + +V D + + G P+ MLA+ V++
Sbjct: 196 RALQ-----VSNDYG-------LVAETARDSGTDALDAMGLEVGRPVQAMLAQAGT-VTD 242
Query: 446 IVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV-SRLKKPS 504
++++ E E K+DG R Q+HY D V +YSRN E TG P++V V + + P
Sbjct: 243 ALDEWH--EAAVETKFDGARVQVHYDGD-DVVLYSRNMENVTGALPELVEFVENNVTAP- 298
Query: 505 VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDILYR----N 558
++D E VA D E LPFQ + R R+ ++ ++ + V ++AFD L+
Sbjct: 299 ---VIIDGEAVAAD-EDGDPLPFQEILKRFRRKHDVAAMREEISVELHAFDCLHAPSADG 354
Query: 559 GQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKT 618
G+ LL R L ++ + L + D DEI F A++ EG+++K
Sbjct: 355 GEDLLDAPFSDRHRRLRSVVDDASAVSE---VLVTDDADEIAAFEATALEGGHEGIMLK- 410
Query: 619 MDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSN 678
+ A Y P R +WLK K D ++LDLV A G G+R V G FLL+ D+
Sbjct: 411 -NPAAPYTPGDRGKDWLKRKPDV-----ETLDLVVTGAEWGEGRRASVLGTFLLSARDAA 464
Query: 679 NEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
+ F++I K+ TG ++ L S L V
Sbjct: 465 GDGFETIGKVATGLTDEELAALSDRLEPHV 494
>gi|290990550|ref|XP_002677899.1| predicted protein [Naegleria gruberi]
gi|284091509|gb|EFC45155.1| predicted protein [Naegleria gruberi]
Length = 726
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 222/479 (46%), Gaps = 76/479 (15%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI------ 356
+T +VFD + IA + ++ + K +I L + + + ++LL +
Sbjct: 217 VTTFEVFDYLKKIANVSKQEKESIAKQKIHILSQLFSTLKSSHEMKLLMKIISSSSSSSL 276
Query: 357 -GLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKI-VKQVFSVLPVYEK------I 408
G+ ++T L L +A +S L +AK+ V Q+ + +Y K +
Sbjct: 277 SGVKKKTFLKFLSEALE------------KSKLNNSAKLSVNQIADSISIYTKTKEVDLL 324
Query: 409 VPALLT-DGVWNLSNTCS--FTPGIPIGPMLAKPTKGVSEIVNKFQDM-------EFTCE 458
L T + ++N+SN S F G I PMLAKP K + E N Q + + CE
Sbjct: 325 FEELFTKNSLFNISNESSPQFQIGTVIPPMLAKPVKQLKE--NFLQHLKKSADETQLLCE 382
Query: 459 YKYDGERAQIHY-LEDGSVEIYSRNAERNT--GKFPDVVLAVSRLKKPSVRSFVLDCEIV 515
YKYDGER +HY + ++ +SRN +++ FP + + +SF++DCE +
Sbjct: 383 YKYDGERLLLHYDATNKNLMSFSRNGKQSALLEDFPQEKEELIKSVLQCDKSFIIDCEYI 442
Query: 516 AYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLY 575
++ K L F R+ SL+ + + I AFDI+Y P+++ L RR +L
Sbjct: 443 ILGKQSGKPLSFHEFQNRS----SLASVSIP-SIRAFDIIYFENGPIIESPLFERRLNL- 496
Query: 576 DSFEE----------EPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATY 625
DS + F A I ++ +F+ ++ SCEGL+IK + Y
Sbjct: 497 DSLVSSINNPTLSLSKGKLFNIANEKECIA--DVYEFMKDSLQDSCEGLMIKPVS--TKY 552
Query: 626 EPSKRSLNWLKLKKDYI-ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQS 684
E KR W KLKK+Y+ + + D+LDL+PI G GKR G++G++L+ + + + S
Sbjct: 553 EFGKRG--WFKLKKEYMPDGLYDTLDLIPIGGCKGVGKRIGLFGSYLMGVRNPKDGKIYS 610
Query: 685 ICKIGTGFSEAMLEERSSSLRSKVIPKPRPY------YRFADTISP------DVWFEPT 731
+C +GTG + MLE + + IP P ++ +S D WF+P
Sbjct: 611 VCSVGTGLNNEMLETLTEEALEQYIPAPIATDPSALEEKYGIVVSKSVFKQVDCWFQPN 669
>gi|406913555|gb|EKD52923.1| hypothetical protein ACD_61C00193G0001 [uncultured bacterium]
Length = 417
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 184/391 (47%), Gaps = 38/391 (9%)
Query: 349 LLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKI 408
++ KLR+G +E+T+ AL Q + K N F + P I
Sbjct: 1 MVIGKLRLGFSEKTIFDALSQMTSGGKSLRKELDN--------------TFQIYPDPGYI 46
Query: 409 VPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQI 468
+ G+ L N T G+P+ P L + EIV+K E E KYDG R QI
Sbjct: 47 TQVVKERGMAGLKNVRVKT-GVPVVPALCQRLNNYREIVDKMG--EAAVERKYDGTRVQI 103
Query: 469 HYLE-DGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPF 527
H+ + Y+RN E ++ FP++ + V +LDCE V YD++ K+LPF
Sbjct: 104 HFNRLKNEIRTYTRNLEESSPMFPELFQMNKWIMGDEV---ILDCEAVGYDKKTGKVLPF 160
Query: 528 QTLSTRARKN-VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFF- 585
Q TR RK+ V+ + + + + FDIL NG+ L++E RR+ L ++
Sbjct: 161 QITITRKRKHGVAETAKSIPLRFFVFDILSLNGRSLIEEPYFERRKFLTKVVKKNETIVP 220
Query: 586 --QFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE 643
F T D E+QK D + EG +IK + Y P ++ NW+K+K+
Sbjct: 221 DEYFKTD----DPVEVQKLHDKFLKEGFEGAVIKMW--NGEYLPGRQGWNWVKIKEAEGA 274
Query: 644 S--IGDSLDLVPIAAFHGRGKRTGV-YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEER 700
S + D+LDLV + G+GKR G GAFL+ E + SI K+GTG ++ +
Sbjct: 275 SGKLSDTLDLVILGYNLGKGKRAGFGMGAFLVGL--RRGESWVSIAKVGTGLTDEEFKGL 332
Query: 701 SSSL-RSKVIPKPRPYYRFADTISPDVWFEP 730
L +SK KP+ Y + ++ PDVW EP
Sbjct: 333 KIKLDKSKTKEKPKDYL-VSGSLVPDVWVEP 362
>gi|147767218|emb|CAN66728.1| hypothetical protein VITISV_041957 [Vitis vinifera]
Length = 272
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 111/168 (66%), Gaps = 13/168 (7%)
Query: 574 LYDSFEEEP-GFFQFA--TTLTSID-------LDEIQKFLDAAVDASCEGLIIKTMDRDA 623
L D F ++ G+F++A TT+ + D L +I FL+ A +SCEG++IK++D DA
Sbjct: 35 LKDLFNBQKLGYFEYAEETTVEADDASTNEATLTKINLFLEEAFRSSCEGIMIKSLDIDA 94
Query: 624 TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
Y PSKR+ WLK+K+DY+E + DSLDLVPI A+HG G++ G Y FL+ACY+ + EEFQ
Sbjct: 95 GYSPSKRTDTWLKVKRDYVEGLNDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPDTEEFQ 154
Query: 684 SICKIGTGFSEAMLEERSSSL-RSKVIPKPRPYYRFADTISPDVWFEP 730
S+C++ +GFS+ +E K++ K PYY+ A+ PD+WF P
Sbjct: 155 SVCRVMSGFSDNFYKEMKEFFNEDKILSKKPPYYQTAEL--PDMWFTP 200
>gi|222479309|ref|YP_002565546.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum lacusprofundi ATCC
49239]
gi|254778141|sp|B9LUZ9.1|DNLI_HALLT RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|222452211|gb|ACM56476.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum lacusprofundi ATCC
49239]
Length = 594
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 148/542 (27%), Positives = 246/542 (45%), Gaps = 56/542 (10%)
Query: 203 ISNETGRILITDIVCNMLRTVMET--TPEDLVPVVYLAANKIAPAHEGLELGIGDASIIK 260
++ E I T +V ++L T +DL V ++ PAH+ L +G A +
Sbjct: 13 LAAEPADIGTTRLVTDLLGAAGGTDENDDDLATVTRFLLGRVFPAHDTRTLDVGPALCRE 72
Query: 261 ALAEACG--RTESHVKKQYQEMGDLGLVA-----KASRSSQSMMRKPDPLTITKVFDTFR 313
A+A A G T V+ + E G++G VA R + D LT+ V R
Sbjct: 73 AIARAAGPNVTADDVEDRLAEEGEIGAVAAGFEFGGQRGLAAFGEGRDRLTVAAVDAELR 132
Query: 314 LIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY 373
+A AG S+ K++ + L E + + RL+ ++R+G+ E + A+ +A +
Sbjct: 133 RLAAAAGDGSESHKRDALFGLFNRCEPAEAKVIARLVLGEMRLGVGEGAVRDAIAEAFLA 192
Query: 374 --------NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCS 425
+E + P +++ +EA V++ V Y + V L D N
Sbjct: 193 GNPEGDERDESDTDDDPILRAG-DEAVVAVERALQVTNDYGR-VAVLARDEGLNGLRAEG 250
Query: 426 FTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVE-------- 477
G P+ MLA+ ++ V F E E K+DG R Q+HY+ + + E
Sbjct: 251 LAVGRPVQAMLAQAGT-ATDAVEAFG--EVAVETKFDGARVQVHYVPESAAEGDDAAGGT 307
Query: 478 -----IYSRNAERNTGKFPDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
IYSRN + T P+VV V +R+ P +LD E+VA D + LPFQ +
Sbjct: 308 ELGPRIYSRNMDDVTDALPEVVEYVEARVSVP----VILDGEVVAVDDDGDP-LPFQEVL 362
Query: 532 TRARKNVSLSDIKVDVCI--YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT 589
R R+ + ++ +V + +AFD L+ +G+ LL E R R + L + + +FA
Sbjct: 363 RRFRRKHDVDRMREEVGLRLHAFDCLHADGEDLLDEPFRARHDRLAEVLSDAAASVEFAG 422
Query: 590 TLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSL 649
D I+ AA+ A EG+++K +A Y P R +WLK K D ++L
Sbjct: 423 -----DPAAIEAAEAAALGAGHEGVMLKNP--EAAYTPGNRGRDWLKRKPDV-----ETL 470
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
D V + A G G+R ++G FLL + ++E +I K+ TG ++ L + + L V+
Sbjct: 471 DAVVVGAEWGEGRRAELFGTFLLGVR-AGDDELATIGKVATGLTDEELADLTERLEPHVV 529
Query: 710 PK 711
+
Sbjct: 530 SE 531
>gi|448678349|ref|ZP_21689356.1| DNA ligase [Haloarcula argentinensis DSM 12282]
gi|445772336|gb|EMA23381.1| DNA ligase [Haloarcula argentinensis DSM 12282]
Length = 554
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 248/560 (44%), Gaps = 72/560 (12%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I E+ IT+ V ++ + P DL + ++ PA+E L IG +A+
Sbjct: 13 IEAESADTAITEAVTDLF---TDAGP-DLSTLARFVQGRVFPAYESRTLDIGPRLCYEAI 68
Query: 263 AEACGRTES--HVKKQYQEMGDLGLVA--------KASRSSQSMMRKPDPLTITKVFDTF 312
A A G+ S V+++ +MG++G VA + + + D LT+ ++
Sbjct: 69 ARAAGQNVSADDVEQRLADMGEIGAVAASYDLGGQQGLAAFGAGGGGNDALTVAELDAEL 128
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
R +A G SQ K + + L + E YL RL+ S++RIG+ E T+ A+ A
Sbjct: 129 RELAAVDGSGSQGTKVDILFGLFSRCSSTEAGYLARLVLSEMRIGVGEGTVRDAVAAA-- 186
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
P+E V++ V Y + +G L+ T + G P+
Sbjct: 187 -----------FDVPVE----AVERAVQVSNDYGMVAEVARDEGESGLA-TVTLEIGRPV 230
Query: 433 GPMLAKPTKGVSEIVNKFQDME-FTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKF 490
MLA+ + +D + E+KYDG R Q+H+ DG ++SRN E T
Sbjct: 231 QAMLAQAGT----VAGALEDWDRAAVEWKYDGARVQVHF--DGEDARLFSRNMEEVTDPL 284
Query: 491 PDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
P+VV V S L P+ +LD E+VA D + LPFQ + R R+ ++ + DV +
Sbjct: 285 PEVVDTVESALDAPA----ILDGEVVAVDTDGDP-LPFQEVLRRFRRKHDVAAAREDVAV 339
Query: 550 --YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
+AFD L+ G+ LL L R + L F + + S D +EI+ A+
Sbjct: 340 RLHAFDCLHAAGEDLLDASLETRHDRLESLFPADSDV--VSQMWLSGDSEEIEDLEAEAL 397
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
A EG+++K D A Y P KR +W K K D ++LD A G G+R V
Sbjct: 398 AAGQEGIMLK--DPTAAYSPGKRGKHWRKRKPDV-----ETLDCAVTGAEWGEGRRANVL 450
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD----TIS 723
G+F L+ ++ + ++ + TG +E L++ + + P+ R D +
Sbjct: 451 GSFELSV--RTDDGYATVGNVATGITEEELDD--------LTERFEPHIRSEDGRDVVLD 500
Query: 724 PDVWFE-PTERPETSNSPAS 742
P V FE E + S S AS
Sbjct: 501 PAVVFEVGYEEIQASQSYAS 520
>gi|448481572|ref|ZP_21604923.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum arcis JCM 13916]
gi|445821825|gb|EMA71609.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum arcis JCM 13916]
Length = 617
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 248/552 (44%), Gaps = 66/552 (11%)
Query: 222 TVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR--TESHVKKQYQE 279
T + + +DL VV ++ PAH+ L +G A +A+A A G+ + + V+ + E
Sbjct: 44 TERDGSTDDLPVVVRFLLGRVFPAHDTRTLDVGPALCREAIARAAGQNVSAADVEDRLAE 103
Query: 280 MGDLGLVA-----KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKAL 334
G++G VA R + D LT+ + + R +A E+G S+ +K++ + L
Sbjct: 104 RGEIGAVAAEYDFGGQRGLAAFGSGRDALTVAALDEELRDLAAESGDGSESRKRDALFGL 163
Query: 335 LVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKP-----------PPN 383
+ E +L RL+ ++R+G+ E T+ A+ +A + ++ P P
Sbjct: 164 FTRCSPSEAAFLARLVLGEMRLGVGEGTVRDAIAEAFLAPDETPDPGDDSGGASESDAPG 223
Query: 384 IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
+ + E+A V++ V Y ++ +G+ L S G P+ MLA+
Sbjct: 224 LVAS-EDAVAAVERALQVTNDYGRVAVRARDEGIAGLREE-SLRVGRPVQAMLAQAGT-A 280
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLED----GSVE-----IYSRNAERNTGKFPDVV 494
++ V+ F E E K+DG R Q+HY G E +YSRN + T P++V
Sbjct: 281 TDAVDAFG--EVAVETKFDGARVQVHYAPADAGLGGTEALGPRLYSRNMDDVTEALPEIV 338
Query: 495 LAVS-RLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYA 551
V+ R+ P +LD E+VA D + LPFQ + R R+ + ++ V + ++A
Sbjct: 339 EHVAERVDAP----VILDGEVVAVDDDGDP-LPFQEVLRRFRRKHDVERMREAVSLRLHA 393
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASC 611
FD L+ +G LL E LR R + L + + A + I AA++A
Sbjct: 394 FDCLHADGDDLLDEPLRDRHDRLREVLPDAAADLTLADDAEA-----IAAAERAALNAGH 448
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
EG+++K A Y P R +WLK K D ++LD V + A G G+R ++G FL
Sbjct: 449 EGVMLKNP--AAAYTPGDRGRDWLKRKPDV-----ETLDAVVVGAEWGEGRRAELFGTFL 501
Query: 672 LACYDSNNEE--------------FQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYR 717
LA N + ++ K+ TG ++ L + + L V+ +
Sbjct: 502 LAVRAENEANGSPDRDVDGPAPPGYATVGKVATGITDEALADLTERLEPHVVDETGTTVA 561
Query: 718 FADTISPDVWFE 729
F + +V +E
Sbjct: 562 FDPELVVEVGYE 573
>gi|448507356|ref|ZP_21614974.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum distributum JCM 9100]
gi|448523374|ref|ZP_21618673.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum distributum JCM 10118]
gi|445698725|gb|ELZ50765.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum distributum JCM 9100]
gi|445701191|gb|ELZ53174.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum distributum JCM 10118]
Length = 617
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 248/553 (44%), Gaps = 68/553 (12%)
Query: 222 TVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR--TESHVKKQYQE 279
T + + +DL VV ++ PAH+ L +G A +A+A A G+ + + V+ + E
Sbjct: 44 TERDGSTDDLPVVVRFLLGRVFPAHDTRTLDVGPALCREAIARAAGQNVSAADVEDRLAE 103
Query: 280 MGDLGLVA-----KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKAL 334
G++G VA R + D LT+ + + R +A E+G S+ +K++ + L
Sbjct: 104 RGEIGAVAADYDFGGQRGLAAFGSGRDALTVAALDEELRDLAAESGDGSESRKRDALFGL 163
Query: 335 LVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKP------------PP 382
+ E +L RL+ ++R+G+ E T+ A+ +A + ++ P P
Sbjct: 164 FTRCSPSEAAFLARLVLGEMRLGVGEGTVRDAIAEAFLAPDETPDPGDDSGGASESDAPE 223
Query: 383 NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKG 442
+ S E+A V++ V Y ++ +G+ L S G P+ MLA+
Sbjct: 224 LVAS--EDAVAAVERALQVTNDYGRVAVRARDEGIAGLREE-SLRVGRPVQAMLAQAGT- 279
Query: 443 VSEIVNKFQDMEFTCEYKYDGERAQIHY----LEDGSVE-----IYSRNAERNTGKFPDV 493
++ V+ F E E K+DG R Q+HY G E +YSRN + T P++
Sbjct: 280 ATDAVDAFG--EVAVETKFDGARVQVHYAPADAGPGGTEALGPRLYSRNMDDVTEALPEI 337
Query: 494 VLAVS-RLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIY 550
V V+ R+ P +LD E+VA D + LPFQ + R R+ + ++ V + ++
Sbjct: 338 VEHVAERVDAP----VILDGEVVAVDDDGDP-LPFQEVLRRFRRKHDVERMREAVSLRLH 392
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
AFD L+ +G LL E LR R + L + + A + I AA+DA
Sbjct: 393 AFDCLHADGDDLLDEPLRDRHDRLREVLPDAAADLTLADDAEA-----IAAAERAALDAG 447
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
EG+++K A Y P R +WLK K D ++LD V + A G G+R ++G F
Sbjct: 448 HEGVMLKNP--AAAYTPGDRGRDWLKRKPDV-----ETLDAVVVGAEWGEGRRAELFGTF 500
Query: 671 LLACYDSNNEE--------------FQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYY 716
LLA N + ++ K+ TG ++ L + + L V+ +
Sbjct: 501 LLAVRAENEANGPPDRDVDGPAPAGYATVGKVATGITDEALADLTERLEPHVVDETGTTV 560
Query: 717 RFADTISPDVWFE 729
F + +V +E
Sbjct: 561 AFDPELVVEVGYE 573
>gi|448450230|ref|ZP_21592129.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum litoreum JCM 13561]
gi|445812082|gb|EMA62078.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum litoreum JCM 13561]
Length = 617
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 145/550 (26%), Positives = 247/550 (44%), Gaps = 68/550 (12%)
Query: 225 ETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR--TESHVKKQYQEMGD 282
+ + +DL VV ++ PAH+ L +G A +A+A A G+ + + V+ + E G+
Sbjct: 47 DGSTDDLPVVVRFLLGRVFPAHDTRTLDVGPALCREAIARAAGQNVSAADVEDRLAERGE 106
Query: 283 LGLVAK-----ASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVA 337
+G VA R + D LT+ + + R +A E+G S+ +K++ + L
Sbjct: 107 IGAVAADYDFGGQRGLAAFGSGRDALTVAALDEELRDLAAESGDGSESRKRDALFGLFTR 166
Query: 338 ATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ------------HSKPPPNIQ 385
+ E +L RL+ ++R+G+ E T+ A+ +A + ++ S P +
Sbjct: 167 CSPSEAAFLARLVLGEMRLGVGEGTVRDAIAEAFLAPDETPDPGDDSGGASESDAPELVA 226
Query: 386 SPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSE 445
S E+A V++ V Y ++ +G+ L S G P+ MLA+ ++
Sbjct: 227 S--EDAVAAVERALQVTNDYGRVAVRARDEGIAGLREE-SLRVGRPVQAMLAQAGT-ATD 282
Query: 446 IVNKFQDMEFTCEYKYDGERAQIHY----LEDGSVE-----IYSRNAERNTGKFPDVVLA 496
V+ F E E K+DG R Q+HY G E +YSRN + T P++V
Sbjct: 283 AVDAFG--EVAVETKFDGARVQVHYAPADAGPGGTEALGPRLYSRNMDDVTEALPEIVEH 340
Query: 497 VS-RLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFD 553
V+ R+ P +LD E+VA D + LPFQ + R R+ + ++ V + ++AFD
Sbjct: 341 VAERVDAP----VILDGEVVAVDDDGDP-LPFQEVLRRFRRKHDVERMREAVSLRLHAFD 395
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEG 613
L+ +G LL E LR R + L + + A + I AA+DA EG
Sbjct: 396 CLHADGDDLLDEPLRDRHDRLREVLPDAAADLTLADDAEA-----IAAAERAALDAGHEG 450
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
+++K A Y P R +WLK K D ++LD V + A G G+R ++G FLLA
Sbjct: 451 VMLKNP--AAAYTPGDRGRDWLKRKPDV-----ETLDAVVVGAEWGEGRRAELFGTFLLA 503
Query: 674 CYDSNNEE--------------FQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFA 719
N + ++ K+ TG ++ L + + L V+ + F
Sbjct: 504 VRAENEANGSPDRDVDGPAPAGYATVGKVATGITDEALADLTERLEPHVVDETGTTVAFD 563
Query: 720 DTISPDVWFE 729
+ +V +E
Sbjct: 564 PELVVEVGYE 573
>gi|432901473|ref|XP_004076853.1| PREDICTED: DNA ligase 3-like [Oryzias latipes]
Length = 1011
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 195/401 (48%), Gaps = 40/401 (9%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V ++ +A+ +D Q+ + ++A+ T + + +IRL++ L++ +
Sbjct: 374 LTIQEVDESLTRLAQLTKEDEQQ---SELEAIAKKCTSNDLKCIIRLIKHDLKMNAGAKH 430
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L A+ PN + + + + VL ++ A G L
Sbjct: 431 VLDAVD-------------PNAYDAFKASRNLGDVIQRVLRNQQE---ASNGSGPRKLL- 473
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
T + P+ PMLA+ K + + + K + + E KYDGER Q+H D S +SR+
Sbjct: 474 TVEASLMTPVQPMLAEACKSIDQAMKKCPNGMYA-EIKYDGERVQVHKSGD-SFSYFSRS 531
Query: 483 AE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+ F D + P S +LD E++ D + K LPF TL K
Sbjct: 532 LKPVLPHKVAHFKDYIPQAF----PGGHSMILDAEVLLIDTKSSKPLPFGTLGIH--KKA 585
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
+ D +VC++ FD +Y NG L++ L+ RR+ L D+ E P F+ +
Sbjct: 586 AFQD--ANVCLFVFDCIYFNGVSLMERPLKERRKFLTDNMVEVPNRILFSEMKHVTRAGD 643
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAA 656
+ + + EGL++K D +TYEP KR +WLK+KKDY+ ++ D+ DLV + A
Sbjct: 644 LADMITRVIREGLEGLVLK--DIKSTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGA 699
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
F+G+G G+ +FL+ CYD +++++ ++ K G+ +AML
Sbjct: 700 FYGKGSNGGIMSSFLMGCYDPDSKKWCTVTKCSGGYDDAML 740
>gi|448428581|ref|ZP_21584313.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum terrestre JCM 10247]
gi|445676050|gb|ELZ28575.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum terrestre JCM 10247]
Length = 605
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 248/552 (44%), Gaps = 66/552 (11%)
Query: 222 TVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR--TESHVKKQYQE 279
T + + +DL V+ ++ PAH+ L +G A +A+A A G+ + + V+ + E
Sbjct: 32 TERDGSTDDLPVVIRFLLGRVFPAHDTRTLDVGPALCREAIARAAGQNVSAADVEDRLAE 91
Query: 280 MGDLGLVA-----KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKAL 334
G++G VA R + D LT+ + + R +A E+G S+ +K++ + L
Sbjct: 92 RGEIGAVAAEYDFGGQRGLAAFGSGRDALTVAALDEELRDLAAESGDGSESRKRDALFGL 151
Query: 335 LVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKP-----------PPN 383
+ E +L RL+ ++R+G+ E T+ A+ +A + ++ P P
Sbjct: 152 FTRCSPSEAAFLARLVLGEMRLGVGEGTVRDAIAEAFLAPDETPDPGDDSGGASESDAPG 211
Query: 384 IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
+ + E+A V++ V Y ++ +G+ L S G P+ MLA+
Sbjct: 212 LVAS-EDAVAAVERALQVTNDYGRVAVRARDEGIEGLREE-SLRVGRPVQAMLAQAGT-A 268
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLED----GSVE-----IYSRNAERNTGKFPDVV 494
++ V+ F E E K+DG R Q+HY G E +YSRN + T P++V
Sbjct: 269 TDAVDAFG--EVAVETKFDGARVQVHYAPADAGLGGTEALGPRLYSRNMDDVTEALPEIV 326
Query: 495 LAVS-RLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYA 551
V+ R+ P +LD E+VA D + LPFQ + R R+ + ++ V + ++A
Sbjct: 327 EHVAERVDAP----VILDGEVVAVDDDGDP-LPFQEVLRRFRRKHDVERMREAVSLRLHA 381
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASC 611
FD L+ +G LL E LR R + L + + A + I AA+DA
Sbjct: 382 FDCLHADGDDLLDEPLRDRHDRLREVLPDAAADLTLADDAEA-----IAAAERAALDAGH 436
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
EG+++K A Y P R +WLK K D ++LD V + A G G+R ++G FL
Sbjct: 437 EGVMLKNP--AAAYTPGDRGRDWLKRKPDV-----ETLDAVVVGAEWGEGRRAELFGTFL 489
Query: 672 LACYDSNNEE--------------FQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYR 717
LA N + ++ K+ TG ++ L + + L V+ +
Sbjct: 490 LAVRAENEANGPPDRDVDGPAPAGYATVGKVATGITDEALADLTERLEPHVVDETGTTVA 549
Query: 718 FADTISPDVWFE 729
F + +V +E
Sbjct: 550 FDPELVVEVGYE 561
>gi|378756751|gb|EHY66775.1| DNA ligase [Nematocida sp. 1 ERTm2]
Length = 374
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 170/330 (51%), Gaps = 35/330 (10%)
Query: 229 EDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAK 288
E+L+ VYL+ +++ G+E+ IG+ ++KAL+ + ++K+ +E GD+ +
Sbjct: 38 EELIYAVYLSIARVSSESNGVEMNIGENILLKALSTFSSSSVDALRKKMKESGDISTIVT 97
Query: 289 ASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA-TDCEPQYLI 347
S + K L++ VF + I++ GK+S +K RI +L T+ E +Y+I
Sbjct: 98 VSSRPRLFFAKKKTLSLAGVFVALKEISELTGKESTLRKTQRIAEVLTQCITNEEVKYII 157
Query: 348 RLLQSKLRIGLAEQTLLAALGQA---------------AVYNEQHSKPPPNIQSPL---- 388
R++ K++IGL+ QT+L +L A A +++ + Q+ +
Sbjct: 158 RIIDGKMKIGLSTQTVLCSLALAFRKKFPDGAIPKENCAEKDKEGNSAETAAQTVIIGAV 217
Query: 389 ---------EEAAKI---VKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
EE K+ +K+ +S LP ++KI+ + + G+ +S T PG P+ PML
Sbjct: 218 DKEGQIEWSEEENKVMDDIKEAYSQLPSFDKIIRYVFSHGLSAVSTTSLIRPGYPLRPML 277
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
A P K + +F+ E+ E+KYDGER Q H+ DG VE++SR E T +F +
Sbjct: 278 AIPEKDPETVAARFKG-EYLVEHKYDGERVQAHFF-DGKVELFSRGLENTTERFNQLTEP 335
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILP 526
+ + K V F+LD E+VAY R+ +K P
Sbjct: 336 LMKANKTGV-PFILDAEVVAYCRKTKKYSP 364
>gi|385803686|ref|YP_005840086.1| DNA ligase (ATP) [Haloquadratum walsbyi C23]
gi|339729178|emb|CCC40410.1| DNA ligase (ATP) [Haloquadratum walsbyi C23]
Length = 618
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 140/538 (26%), Positives = 237/538 (44%), Gaps = 82/538 (15%)
Query: 215 IVCNMLRTVMETTPEDLVPV-VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHV 273
++ + V T + L+PV V L ++ E E+G+ A A+++A G +
Sbjct: 25 LLADCFLDVYNNTEKSLLPVTVRLVQGRVFARWEAAEIGVSTAGAADAISKATGVESEQI 84
Query: 274 KKQYQEMGDLGLVAKAS---RSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNR 330
+ ++E GDLG A + R Q++ PLT+T+V++T R +A AG SQ+K+++
Sbjct: 85 ETWWREEGDLGDAAAYAVDDRVQQTLT--ATPLTVTRVYETLREVASYAGSGSQQKQRDE 142
Query: 331 IKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEE 390
I L+ A+ +Y++R + +R+G+ E + AL A + + L
Sbjct: 143 IAGLISDASPLAARYIVRTVTGSMRLGVGEGIVRNALASAFLDMSDDAADAVQRAIDLTN 202
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF 450
+V Q V E+ P L + PI PMLAK + + V++
Sbjct: 203 DVAVVAQ-----RVAEQGQPGL---------DDVDLELFRPIKPMLAKQAESIQTAVDEL 248
Query: 451 ----------QDMEFT------CEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDV 493
++E + E+KYDG RA+IH DG + +Y+R T +FPDV
Sbjct: 249 AADPKHIERNHNIELSHSGAVLIEFKYDGIRAKIH--RDGDEIRVYTRRLSDVTEQFPDV 306
Query: 494 VLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP--FQTLSTRARKNVSLSDI--KVDVCI 549
V A ++++ E+V YD + P FQTL+ R ++ +++ I + V
Sbjct: 307 VSAAR--DHIDAEHYIIEAELVGYDPQSNDDTPVTFQTLAQRIQRTDNVATIAKSIPVTT 364
Query: 550 YAFDILYRNGQPLLQEQLRVRREHL---------YDSFEEEPGFFQFATTLTSIDLDEIQ 600
Y FD+L NG+ LL + L +R E L DS +T++T++ D+ Q
Sbjct: 365 YVFDLLALNGESLLTDTLEMRLERLNTILSTKATSDSKSASTHNAHSSTSVTTVSNDQYQ 424
Query: 601 --------------------KFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKD 640
+F + A+ A EG++IK R Y+P R K+K
Sbjct: 425 SSSSLRRAQCTWATTQTTATEFYEDALAAGHEGVMIKNPTR--PYQPGSRVGYQRKIKPT 482
Query: 641 YIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
+ LDLV A G+++ G LAC ++ + ++ TGF++ LE
Sbjct: 483 M-----EPLDLVVTRAKWSEGRKSDFLGRPYLACRTADG-NLAEVGRMHTGFTDDQLE 534
>gi|219853327|ref|YP_002467759.1| ATP-dependent DNA ligase I [Methanosphaerula palustris E1-9c]
gi|254778142|sp|B8GGB8.1|DNLI_METPE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|219547586|gb|ACL18036.1| DNA ligase I, ATP-dependent Dnl1 [Methanosphaerula palustris E1-9c]
Length = 556
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 247/538 (45%), Gaps = 53/538 (9%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
+ + GR+ + + +L ++ + EDL + KI P +LGIG + +A+
Sbjct: 13 LEAQNGRLEMKHAISVILPSL---SGEDLPIFIRFLMGKIFPDWSPQKLGIGPNLLYEAV 69
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFDTFRLIAKEAG 320
A G ++ + GD GL + + Q+ DP ++ +V+ IA AG
Sbjct: 70 AYVAGTKKTALVDLINRTGDAGLAIEQFLATKEQTAFFTEDP-SLAEVYAACTRIAASAG 128
Query: 321 KDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKP 380
SQ ++ ++ L + E +YL RL+ +LRIG+ E T+ A+ +A ++
Sbjct: 129 GRSQRERLLVLRQLFGNVSPFEARYLARLILGELRIGIGEGTVRDAIAEA------YTVE 182
Query: 381 PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPT 440
P ++ ++ + + E ++ S P P+ MLA+
Sbjct: 183 PAQVEHAMQALNDLGEVALRAREGEEGLI-------------HLSIAPFRPVKMMLAQAG 229
Query: 441 KGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRL 500
+ E++ E E+KYDG R Q H E + IYSR E T P+V A L
Sbjct: 230 TTIPEMLAAHG--EVAVEFKYDGTRFQFHK-EGKTCRIYSRKLEEVTDAVPEVGEA---L 283
Query: 501 KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIY--AFDILYRN 558
+ +LD E++A + + LPFQT+ R R+ ++ + + + FDILYR+
Sbjct: 284 LGATDHDVILDGEVIAIGADGRP-LPFQTVLRRFRRKHGIAAAREAITLVPRVFDILYRD 342
Query: 559 GQPLLQEQLRVRREHLYDSFEEEPGFF---QFATTLTSIDLDEIQKFLDAAVDASCEGLI 615
G+ L+ + RR L + P + Q ++ ++DL +L+A + EG++
Sbjct: 343 GETLIDLPFQSRRAILSATI--GPEYLAPQQVLSSAEAVDL----LYLEAMAEGH-EGVM 395
Query: 616 IKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY 675
+K D + Y P R +W+K+K + ++LDLV I A G G+R +G+FLLAC
Sbjct: 396 LK--DLLSLYSPGVRGKHWVKIKPEV-----ETLDLVVIGAEWGEGRRARTFGSFLLACL 448
Query: 676 DSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTER 733
D F+++ K+ TG S+ L+E + + +VI + F T+ +V + ++
Sbjct: 449 DQGV--FRAVSKVATGISDEQLQELYTLFKDQVIAESGNTVTFEPTVIFEVGYAEIQK 504
>gi|448352959|ref|ZP_21541738.1| ATP-dependent DNA ligase I [Natrialba hulunbeirensis JCM 10989]
gi|445641325|gb|ELY94405.1| ATP-dependent DNA ligase I [Natrialba hulunbeirensis JCM 10989]
Length = 592
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 141/528 (26%), Positives = 229/528 (43%), Gaps = 84/528 (15%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRT--ESHV 273
+ +R ++ +DL V ++ PA + L IG + A+A A G V
Sbjct: 22 IVAHVRDLLAEAGDDLPIVARFVQGRVFPAWDSTTLDIGPNTCYDAIARAAGTNVDADDV 81
Query: 274 KKQYQEMGDLGLVAKA-----------------------------SRSSQSMMRKPDPLT 304
+ + E G++G VA + + + LT
Sbjct: 82 EDRLAERGEIGAVAASYDFGGQQGLGAFMGGGGAGAGGAGGDNDDHNNGGTGNNNTGNLT 141
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ +V DT +A G SQ++K + + L ++ E +YL RL+ S++RIG+ E T+
Sbjct: 142 VREVNDTLTDLAAAEGSGSQDRKVDLLFGLFNRCSNDEARYLARLVLSEMRIGVGEGTVR 201
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
A+ +A P Q P+E A ++ Y ++ DGV L +
Sbjct: 202 DAIAEA------FDVP----QEPVERALQVSND-------YGQVAETAREDGVSGL-DEI 243
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY----------LEDG 474
G P+ MLA+ V++ + ++ E E+KYDG R Q+HY G
Sbjct: 244 DLEIGRPVQAMLAQAGT-VTDALEEWD--EAAVEWKYDGARIQLHYDPADPGDPDGDNKG 300
Query: 475 SVEIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
++SRN E T P+VV A L P +LD E+VA D + LPFQ + R
Sbjct: 301 ETHVFSRNMEAVTDALPEVVEFANEHLDSP----VILDGEVVAIDDDGSP-LPFQEVLKR 355
Query: 534 ARKNVSLSDIKVDVCI--YAFDILYRNGQPLLQEQLRVRREHLYDSF----EEEPGFFQ- 586
R+ ++ + DV + FD L+ +G LL E L R + L ++EP
Sbjct: 356 FRRKHDVAKAREDVSVRPVFFDCLHADGDDLLDEPLVERHDQLESVLAAERQQEPEEIDG 415
Query: 587 FATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIG 646
F+ + D DEI+ A++A EG+++K D+TY P +R NW K K D
Sbjct: 416 FSLLWVTDDPDEIEAVDADALEAGHEGIMLKNP--DSTYSPGRRGKNWQKRKPDV----- 468
Query: 647 DSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
++LD V A G G+R G F L+ D ++ +++ K+ TG ++
Sbjct: 469 ETLDCVVTGAEWGEGRRATFLGTFELSVRDGDD--LETVGKVATGITD 514
>gi|115439237|ref|NP_001043898.1| Os01g0685500 [Oryza sativa Japonica Group]
gi|113533429|dbj|BAF05812.1| Os01g0685500, partial [Oryza sativa Japonica Group]
Length = 318
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 119/193 (61%), Gaps = 14/193 (7%)
Query: 562 LLQEQLRVRREHLYDSFEEEPGFFQFATTLT------SID----LDEIQKFLDAAVDASC 611
LL LR RR++++D F+E+PG F+ A LT S+D L+ + F A +SC
Sbjct: 65 LLNCSLRQRRKYIHDLFQEKPGHFELAQQLTVEADEASVDNSTTLERMNTFFKMACQSSC 124
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFL 671
EG+++K +D DA Y SKR +WLK+K+DY+ +GDSLDLVPI A++G G++ G Y FL
Sbjct: 125 EGIMLKILDVDAGYSASKRCDSWLKVKRDYV-GLGDSLDLVPIGAWYGNGRKAGWYSPFL 183
Query: 672 LACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRS-KVIPKPRPYYRFADTISPDVWFEP 730
+ACY+ EEFQS+C++ +GFS+ +E +++PK YY+ D + P++WF
Sbjct: 184 MACYNPEYEEFQSVCRVMSGFSDEFYKEMKEFYSGDRILPKKPVYYK-TDEL-PELWFSA 241
Query: 731 TERPETSNSPASI 743
+ E + ++
Sbjct: 242 EQVWEIRGADLTL 254
>gi|448627570|ref|ZP_21672036.1| DNA ligase [Haloarcula vallismortis ATCC 29715]
gi|445758878|gb|EMA10174.1| DNA ligase [Haloarcula vallismortis ATCC 29715]
Length = 553
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 235/520 (45%), Gaps = 58/520 (11%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I E+ IT+ V ++ DL + ++ PA+E L IG +A+
Sbjct: 13 IEAESADTAITEAVTDLFTD----AGSDLPTLARFVQGRVFPAYEARTLDIGPRLCYEAI 68
Query: 263 AEACGR--TESHVKKQYQEMGDLGLVA-------KASRSSQSMMRKPDPLTITKVFDTFR 313
A A G+ + V+++ +MG++G VA + ++ D LT+ ++ R
Sbjct: 69 ARAAGQNISADDVEQRLADMGEIGAVAASYDLGGQQGLAAFGAGGGSDALTVAELDAELR 128
Query: 314 LIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY 373
+A G SQ K + + L + E YL RL+ S++RIG+ E T+ A+ A
Sbjct: 129 DLAAVDGSGSQGTKVDILFGLFSRCSPTEASYLARLVLSEMRIGVGEGTVRDAVAAA--- 185
Query: 374 NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIG 433
P++ V++ V Y + +G L +T G P+
Sbjct: 186 ----------FGVPVD----AVERAVQVSNDYGMVAEVARDEGEAGL-DTIRLEIGRPVQ 230
Query: 434 PMLAKPTKGVSEIVNKFQDME-FTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKFP 491
MLA+ + +D + E+KYDG R Q+H+ DG ++SRN E T P
Sbjct: 231 AMLAQ----AGTVAGALEDWDRAAVEWKYDGARVQVHF--DGEDARLFSRNMEEVTDPLP 284
Query: 492 DVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVC 548
+VV V S L P+ +LD E+VA D + + LPFQ + R R+ +V+ + V V
Sbjct: 285 EVVDTVESTLDAPA----ILDGEVVAVDADGEP-LPFQEVLRRFRRKHDVAAARENVAVR 339
Query: 549 IYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVD 608
++AFD L+ +G+ LL L R + L F P + S D I+ A+D
Sbjct: 340 LHAFDCLHADGEDLLDAPLETRHDRLESLF--PPDSEIVSQMWLSDDAGGIEDLETEALD 397
Query: 609 ASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
A EG+++K D A+Y P KR +W K K D ++LD V A G G+R G
Sbjct: 398 AEQEGIMLK--DPTASYSPGKRGKHWRKRKPDV-----ETLDCVVTGAEWGEGRRANALG 450
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
+F L+ ++ + ++ + TG ++A L++ + + +
Sbjct: 451 SFELSV--RTDDGYATVGNVATGITDAELDDLTERFEAHI 488
>gi|358336160|dbj|GAA54723.1| DNA ligase 3 [Clonorchis sinensis]
Length = 747
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 149/289 (51%), Gaps = 22/289 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQ-DMEFTCEYKYDGERAQIHYLEDGSVEIYSRN-----AE 484
PI PMLA+ + ++ K + D E E KYDGER QIH D V +SR+
Sbjct: 238 PIKPMLAEACRSAAQAFAKTEPDGELFAEIKYDGERVQIHKDGDKFV-FFSRSLKAVPTN 296
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
+ + P + A +R K+ V+DCEI+ D + K LPF +L R + D
Sbjct: 297 KVSHVEPYIPKAFARAKQ-----LVIDCEILLLDTKTNKPLPFGSLGVHKR--AAFKD-- 347
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
VCI+ FD LY NG+ L+ + + RR L F E P + D+ + +
Sbjct: 348 ATVCIFVFDCLYLNGESLIHKPISSRRSVLEQYFCEIPHRVLLSEKHVIQDIPSLNILMA 407
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGK 662
+ EGL++K +TYEP KR +WLK+K+DY+ S+ DS+DL+ + A++G G
Sbjct: 408 RVFSENLEGLVLKP--SHSTYEPGKR--HWLKIKRDYLAEGSMADSVDLIVLGAYYGTGN 463
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
+ G+ FL+ YD +++F ++ K G GFS+ ML+ L+ K I +
Sbjct: 464 KAGLMSVFLMGAYDPASKQFTTVTKCGNGFSDEMLQMLQKKLKMKRITQ 512
>gi|448336720|ref|ZP_21525813.1| DNA ligase [Natrinema pallidum DSM 3751]
gi|445628270|gb|ELY81579.1| DNA ligase [Natrinema pallidum DSM 3751]
Length = 577
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 243/529 (45%), Gaps = 72/529 (13%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES--HV 273
+ +R ++ ++ V ++ PA + L IG ++ +A+A A GR S +
Sbjct: 22 IVAHVRDLLAAAEGEIEVVTRFVQGRVFPAWDSTTLDIGPSACYEAIARAAGRNVSSDDI 81
Query: 274 KKQYQEMGDLGLVAKASR--SSQSM-------MRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
+++ EMG++G VA + Q + D LT+ +V +T +A G S
Sbjct: 82 EERLAEMGEIGDVAASYEFGGQQGLGAFTDGDGGTGDDLTVREVANTLAELAAAEGSGSH 141
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI 384
++K + + L A+ E +YL RL+ S++RIG+ E T+ A I
Sbjct: 142 DRKVDLLFGLFNRASSEEARYLARLVLSEMRIGVGEGTVRDA-----------------I 184
Query: 385 QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVS 444
+ E V++ V Y ++ +GV L + G P+ MLA+ V+
Sbjct: 185 AAAFEVPEDRVERALQVSNDYGRVARIARDEGVVGL-DAMDLAVGRPVQAMLAQAGT-VT 242
Query: 445 EIVNKFQDMEFTCEYKYDGERAQIHY----LEDG---SVE--IYSRNAERNTGKFPDVV- 494
+ + ++ E+KYDG R Q+H+ ++DG +VE ++SRN E T P+VV
Sbjct: 243 DALEEWGTA--AVEWKYDGARIQLHHDPAGMDDGDGSTVETRVFSRNMEDVTDALPEVVE 300
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAF 552
A L P+ +LD E+VA D + LPFQ + R R+ ++ + DV + F
Sbjct: 301 FAAETLDAPA----ILDGEVVAVDDDGSP-LPFQEVLKRFRRKHDVAKAREDVSVRPVFF 355
Query: 553 DILYRNGQPLLQEQLRVRREHLY-------------DSFEEEPGFFQFATTLTSIDLDEI 599
D L+ G+ LL++ L R + L D+ +E + T+ D DEI
Sbjct: 356 DCLHAGGEDLLEDPLTTRHDGLRSVLADSGTDGDAGDAVADED-IEGLSLLWTTDDPDEI 414
Query: 600 QKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHG 659
+ A++A EG+++K D +TY P +R +W K K D +E+I D V A G
Sbjct: 415 ESIDADALEAGHEGIMLK--DPGSTYSPGRRGKHWRKRKPD-VETI----DCVVTGAEWG 467
Query: 660 RGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
G+R G F LA ++F+++ K+ TG ++ L E + L +
Sbjct: 468 EGRRATFLGTFELAV--RTGDDFETVGKVATGITDEKLAELTDLLEPHI 514
>gi|90103422|gb|ABD85555.1| ligase I-like [Ictalurus punctatus]
Length = 160
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 97/155 (62%), Gaps = 12/155 (7%)
Query: 348 RLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIV 395
R L KLRIGLAEQ++L AL QA + + PP + ++ LEE I+
Sbjct: 1 RSLAGKLRIGLAEQSVLTALSQAVCLSPPGQEFPPAVIDAGKGMSAESKRAWLEEKGLIL 60
Query: 396 KQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEF 455
KQ + +P Y+ I+P +L G+ L N C TPG+P+ PMLA PTKGV E++ +F + F
Sbjct: 61 KQTYCEMPNYDAIIPVMLKLGIDELPNHCKLTPGVPLRPMLAHPTKGVGEVMKRFDETAF 120
Query: 456 TCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
TCEYKYDGERAQIH L +G V I+SRN E NT K+
Sbjct: 121 TCEYKYDGERAQIHILCNGEVRIFSRNQEDNTSKY 155
>gi|448346594|ref|ZP_21535479.1| DNA ligase I, ATP-dependent Dnl1 [Natrinema altunense JCM 12890]
gi|445632797|gb|ELY86008.1| DNA ligase I, ATP-dependent Dnl1 [Natrinema altunense JCM 12890]
Length = 590
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 144/538 (26%), Positives = 236/538 (43%), Gaps = 78/538 (14%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES--HV 273
V +R + DL V A ++ PA + L IG ++ A+A A G S V
Sbjct: 22 VVAHVRDLFADAGSDLEIVARFAQGRVFPAWDSTTLDIGPSACYDAIARAAGTNVSGDDV 81
Query: 274 KKQYQEMGDLGLVAKASR--SSQSM-------MRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
+ + E+G++G VA Q + LT+ +V + IA G SQ
Sbjct: 82 EARLAEVGEIGDVAANYEFGGQQGLGAFTGGSGGNGGDLTVREVHEALADIAAAEGSGSQ 141
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI 384
++K + + L + E +YL R++ S++RIG+ E T+ A+ +A
Sbjct: 142 DRKVDLLFGLFNRCSSEEARYLARIVLSEMRIGVGEGTVRDAIAEA-------------F 188
Query: 385 QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVS 444
P + V++ V Y ++ +G+ L + G P+ MLA+ T V+
Sbjct: 189 DVPTDR----VERALQVSNDYGQVARIARDEGIEGL-DAMELDVGRPVQAMLAQ-TGTVT 242
Query: 445 EIVNKFQDMEFTCEYKYDGERAQIHY------LEDGS---VEIYSRNAERNTGKFPDVV- 494
+ + ++ E E+KYDG R Q+H+ DGS ++SRN E T P+VV
Sbjct: 243 DALEEWD--EAAVEWKYDGARIQLHHDPSGLAESDGSTVETRVFSRNMEEVTDALPEVVE 300
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAF 552
A + L++P+ +LD E+VA D E LPFQ + R R+ ++ + DV + F
Sbjct: 301 FAAAHLEEPA----ILDGEVVAID-EDGSPLPFQEVLKRFRRKHDVAKAREDVSVRPVFF 355
Query: 553 DILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ---------FATTLTSIDLDEIQKFL 603
D L+ G+ LL E L R + L + + + D DEI+
Sbjct: 356 DCLHVGGEDLLAEPLTTRHDRLRSVLVDADADADSVADDEIEGLSLLWQTGDPDEIESIA 415
Query: 604 DAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
A++A EG+++K + D+TY P +R NW K K D ++LD V A G G+R
Sbjct: 416 AEALEAGHEGIMLK--NPDSTYSPGRRGKNWRKRKPDV-----ETLDCVVTGAEWGEGRR 468
Query: 664 TGVYGAFLLACYDSNNEE-------------FQSICKIGTGFSEAMLEERSSSLRSKV 708
G F LA ++ E +++ K+ TG ++ LEE + L +
Sbjct: 469 ATFLGTFELAVRAGDDSEERRSAGSAVEPQTLETVGKVATGITDEKLEELTDLLEPHI 526
>gi|448331085|ref|ZP_21520359.1| DNA ligase I, ATP-dependent Dnl1 [Natrinema versiforme JCM 10478]
gi|445610209|gb|ELY63984.1| DNA ligase I, ATP-dependent Dnl1 [Natrinema versiforme JCM 10478]
Length = 583
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 141/530 (26%), Positives = 238/530 (44%), Gaps = 77/530 (14%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR--TESHV 273
+ +R ++ +++ V A ++ PA + L IG ++ +A+A A G + + V
Sbjct: 22 IVAHVRELLADAGDEIEIVARFAQGRVFPAWDSTTLDIGPSACYEAIARAAGTNVSSNDV 81
Query: 274 KKQYQEMGDLGLVA---------------------KASRSSQSMMRKPDPLTITKVFDTF 312
+++ E+G++G VA + LT+ +V +T
Sbjct: 82 EERLAEVGEIGDVAARYDFGGQQGLGAFTGGGTDDSGAGGGTGGNGTGGDLTVREVAETL 141
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
+A G S ++K + + L + E +YL RL+ S++RIG+ E T+ A+ AA
Sbjct: 142 ADLAAAEGSGSHDRKVDLLFGLFNRCSSEEARYLARLVLSEMRIGVGEGTVRDAI--AAA 199
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
++ P E V++ V Y ++ +GV L + G P+
Sbjct: 200 FD-----------VPKER----VERALQVSNDYGRVARIARDEGVDGL-DAMELDVGRPV 243
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFT-CEYKYDGERAQIHYL-EDGSVEIYSRNAERNTGKF 490
MLA+ + + ++ E E+KYDG R Q+HY DG ++SRN E T
Sbjct: 244 QAMLAQ----AGTVTDALEEWETAGVEWKYDGARVQLHYDPGDGETRVFSRNMEDVTDAL 299
Query: 491 PDVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
P+VV A RL+ P +LD E+VA D E LPFQ + R R+ ++ + DV +
Sbjct: 300 PEVVEFADERLESP----VILDGEVVAID-EDGSPLPFQEVLKRFRRKHDVAKAREDVSV 354
Query: 550 --YAFDILYRNGQPLLQEQLRVR----REHLYDSFEE---------EPGFFQFATTLTSI 594
FD L+ G+ LL+E L R R L D+ +E + + +
Sbjct: 355 RPVFFDCLHAGGEDLLEEPLTTRHDRLRSVLVDAVDETGSDAAAIDDEDIEGLSLLWRTD 414
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPI 654
D DEI+ A++A EG+++K ++TY P +R +W K K D ++LD V
Sbjct: 415 DPDEIESIDADALEAGHEGIMLKNP--ESTYSPGRRGKHWRKRKPDV-----ETLDCVVT 467
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
A G G+R G F L+ E+ +++ K+ TG ++ LEE + L
Sbjct: 468 GAEWGEGRRATFLGTFELSV--RAGEDLETVGKVATGITDEKLEELTDLL 515
>gi|432330028|ref|YP_007248171.1| ATP-dependent DNA ligase I [Methanoregula formicicum SMSP]
gi|432136737|gb|AGB01664.1| ATP-dependent DNA ligase I [Methanoregula formicicum SMSP]
Length = 551
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 236/529 (44%), Gaps = 60/529 (11%)
Query: 207 TGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEAC 266
+GR+ + I+ +L + T E+L V +I +LGIG + +A+
Sbjct: 17 SGRLDMIAIISQVLPGL---TDEELPVFVRFVMGRIFADWSSRKLGIGPNLLYEAVGYVA 73
Query: 267 GRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
G + V + GD+G + SQ+ D L + +V++ IA GK SQ
Sbjct: 74 GVKKEQVIDKINATGDVGTAVEELLELKSQTTFFHED-LELVQVYNELIAIADTEGKKSQ 132
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI 384
+K ++ LL A E +YL R++ +LRIG+ E ++ A+ +A + +
Sbjct: 133 REKGLLVRRLLANALPIEGRYLARIMLEELRIGVGEGSVREAVAKAFGVDSSLVEHAQQA 192
Query: 385 QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVS 444
+ + E A++ K + L T P+ MLA+ ++
Sbjct: 193 LNDMGEVARLAKTGAAAL-------------------EDVKITLFHPVRMMLAQAGS-IA 232
Query: 445 EIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPS 504
++ + E E+KYDG R Q H + +YSR E T PDV + +L +
Sbjct: 233 GMIE--EHGEIAAEFKYDGSRFQFHK-KGNWARLYSRRLEDVTAALPDV---IGQLMGAT 286
Query: 505 VRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVCIYAFDILYRNGQPL 562
+LD E++A + + +PFQ++ R R+ +V+ + K+++ FDILY +G+ L
Sbjct: 287 DHDVILDGEVIAI--KDGRPMPFQSVLRRFRRRHDVAEAQEKIEMVPNVFDILYLDGETL 344
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRD 622
+ RR+ L + A S + I+K + A+ A EG++IK
Sbjct: 345 IDLPFSERRKKLESVMK-----MSIAPQTVSSSQEIIEKTYNDALAAGHEGIMIKV--PS 397
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEF 682
+ Y P +R NW+K+K + D+LDL I A G GKR V+G+FL+AC N +
Sbjct: 398 SPYTPGQRGKNWIKIKPEV-----DTLDLAVIGAEWGEGKRAHVFGSFLVAC--QNQGKL 450
Query: 683 QSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
+ ++ TGFS+ L E L+ V K +V FEPT
Sbjct: 451 LPLSRVATGFSDEQLAEVYDLLKDTVERKA----------GKEVTFEPT 489
>gi|448708540|ref|ZP_21701093.1| DNA ligase, partial [Halobiforma nitratireducens JCM 10879]
gi|445793188|gb|EMA43776.1| DNA ligase, partial [Halobiforma nitratireducens JCM 10879]
Length = 565
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 228/505 (45%), Gaps = 63/505 (12%)
Query: 234 VVYLAANKIAPAHEGLELGIGDASIIKALAEACGRT--ESHVKKQYQEMGDLGLVAKA-- 289
V ++ PA + L IG ++ +A+A A G V+ + ++G++G VA +
Sbjct: 31 VARFVQGRVFPAWDSTTLDIGPSACYEAIARAAGTNVDADDVEDRLADVGEIGDVAASYD 90
Query: 290 -------SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCE 342
+ D LT+ +V + +A G+ S+++K + + L + E
Sbjct: 91 FGGQRGLAAFGAGNGDDGDGLTVREVHEQLVDLAATEGEGSEDRKIDVLFGLFNRCSSDE 150
Query: 343 PQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVL 402
+YL RL+ S++RIG+ E T+ A+ A E+ + + + E A++ +
Sbjct: 151 ARYLARLVLSEMRIGVGEGTVRDAIAAAFDVPEERVERALQVSNDYGEVARVASEA---- 206
Query: 403 PVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYD 462
G+ L + G P+ MLA+ V++ + ++ E E+KYD
Sbjct: 207 -------------GLEGL-DAMELAVGRPVQAMLAQAGT-VTDALEEWD--EAAVEWKYD 249
Query: 463 GERAQIHYLEDG-----------SVEIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSFVL 510
G R Q+H+ DG + ++SRN E TG P+VV A L+ P+ +L
Sbjct: 250 GARIQLHHDPDGLESAAGEDGDATTRVFSRNMEDVTGALPEVVEYAAETLEGPA----IL 305
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILYRNGQPLLQEQLR 568
D E+VA D + LPFQ + R R+ ++ + V + FD L+ +G LL E L
Sbjct: 306 DGEVVAVDDDGNP-LPFQEVLRRFRRKHDVAKARESVAVRPVFFDCLHADGDDLLGEPLP 364
Query: 569 VRREHLYDSFEEEP-----GFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDA 623
R E L ++P + + D DEI+ AA+++ EG+++K ++
Sbjct: 365 TRHERLEQVLADDPTREPDDIEGLSLLWLTDDPDEIESIDAAALESGHEGIMLKNP--ES 422
Query: 624 TYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
TY P +R +W K K D ++LD V A G G+R G F L+ D + E +
Sbjct: 423 TYSPGRRGKHWRKRKPDV-----ETLDCVVTGAAWGEGRRATFLGTFELSVRDESTGELE 477
Query: 684 SICKIGTGFSEAMLEERSSSLRSKV 708
++ K+ TG ++ L + + L +
Sbjct: 478 TVGKVATGITDEKLADLTERLEPHI 502
>gi|219113301|ref|XP_002186234.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583084|gb|ACI65704.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 337
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 151/288 (52%), Gaps = 26/288 (9%)
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY----DREKQKILPFQTL 530
+V ++SR+ N+ +FPDV + + + SV SF+LD EIV + K ++LPFQ L
Sbjct: 1 TVRLFSRHLLDNSEQFPDVAEYLLQARSDSVHSFILDSEIVGVYMDATKGKFRMLPFQDL 60
Query: 531 STRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
STR R + S+ +V V IYAFD+LY NG+ LL+ RR+ L + F+E GF +
Sbjct: 61 STR-RGSQSVERDRVQVRIYAFDLLYLNGESLLKVPFWKRRKLLQEVFKETLGFAHAQSV 119
Query: 591 -LTSIDLDEIQKFLDAAVDASCEGLIIKTMD------------RDATYEPSKRSLNWLKL 637
L + D + ++ L+ AV EGL+IK R YE RS WLKL
Sbjct: 120 GLATFDDELLRATLEQAVTDGAEGLMIKLTGEGYHAPNADVSCRTFGYESGTRSQLWLKL 179
Query: 638 KKDYIESIGDSLDLVPIAAFHGRGKRT--GVYGAFLLACYDSNNEEFQSICKIGTGFSEA 695
K+DY+ D++D+VPI A++G G++ G L A YD + F+SI + F++A
Sbjct: 180 KRDYVVGYADTIDVVPIGAWYGNGRKAQKGFLSPILFAVYDEDEGAFRSISRC-MSFTDA 238
Query: 696 MLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASI 743
M + R + P Y +T P +WF+P E E S + S+
Sbjct: 239 MYQGR---VNCYTTTPPSTYIITNET--PSIWFKPMEVFEVSFADLSL 281
>gi|336254095|ref|YP_004597202.1| DNA ligase [Halopiger xanaduensis SH-6]
gi|335338084|gb|AEH37323.1| DNA ligase [Halopiger xanaduensis SH-6]
Length = 566
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 235/516 (45%), Gaps = 63/516 (12%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I E + I V ++LR DL V ++ PA + L IG ++ +A+
Sbjct: 13 IEAEPADLEIVAHVTDLLRD----AEADLEIVARFVQGRVFPAWDSTTLDIGPSACYEAI 68
Query: 263 AEACGRT--ESHVKKQYQEMGDLGLVAKA-SRSSQSMMRK-------PDPLTITKVFDTF 312
A A G V+ + E G++G VA + Q + D LT+ +V++T
Sbjct: 69 ARAAGTNVDADDVEDRLAETGEIGDVAASYDFGGQQGLGAFTGGDGGEDDLTVREVYETL 128
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
+A G SQ++K + + L + E +YL RL+ S++RIG+ E + A+ +A
Sbjct: 129 CDLAAAEGSGSQDRKVDLLFGLFNRCSSEEARYLARLVLSEMRIGVGEGAVRDAVAEAFD 188
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
E+ + + + E A+I + +G+ L G P+
Sbjct: 189 VPEEEVERALQVSNDYGEVARIARD-----------------EGLEGL-EAIDLEIGRPV 230
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYL-EDGSVEIYSRNAERNTGKFP 491
MLA+ V++ + ++ E E+KYDG R Q+H+ +D + ++SRN E T P
Sbjct: 231 QTMLAQAGT-VTDALEEWD--EAAVEWKYDGARIQLHHAPDDDTTRVFSRNMEEVTDALP 287
Query: 492 DVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI- 549
+V+ A L++P +LD E+VA D + LPFQ + R R+ + + +V +
Sbjct: 288 EVLEYADETLEEP----VILDGEVVAVDDDGGP-LPFQEVLKRFRRKHDVEKAREEVTVR 342
Query: 550 -YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQ----------FATTLTSIDLDE 598
FD L+ G+ LL+E L R + L E+P + T+ D DE
Sbjct: 343 PVFFDCLHAGGEDLLEEPLTARHDRLRAVLAEDPDAVTETEDERDVEGLSLLWTTDDPDE 402
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFH 658
I+ A++A EG+++K ++TY P +R +W K K D +++D V A
Sbjct: 403 IEAIDADALEAGHEGIMLKNP--ESTYSPGRRGKHWRKRKPDV-----ETVDCVVTGAEW 455
Query: 659 GRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
G G+R G F L+ D ++ +++ K+ TG ++
Sbjct: 456 GEGRRANFLGTFELSVRDGDD--LETVGKVATGITD 489
>gi|393906039|gb|EJD74156.1| DNA ligase [Loa loa]
Length = 840
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 189/411 (45%), Gaps = 79/411 (19%)
Query: 342 EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSV 401
E +Y+IRL+ LRI + +L L + A QHS+ N+Q+ +E+ + K+
Sbjct: 343 ELKYIIRLIMKDLRINAGAKHILEGLRKGAYEMFQHSR---NLQTVIEKCQQTDKE---- 395
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
LL G+ + NT P+ PMLA+P + V + + K E E KY
Sbjct: 396 ---------ELLESGI--ILNT-------PVKPMLAEPCRDVKQAMEKCS-KEMYAEIKY 436
Query: 462 DGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKK------PSVRSFVLDCEI 514
DGER Q+H +DGS +SR+ + P + V L K P+ R ++D E+
Sbjct: 437 DGERLQLH--KDGSNFRFFSRSLK------PALDHKVVDLNKVVSEAFPTSRDLIVDTEM 488
Query: 515 VAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHL 574
+ D K LPF TL +++ +++ LR RR+ L
Sbjct: 489 LLIDTNTGKPLPFGTLG-----------------------IHKKSSSRMRQSLRERRKFL 525
Query: 575 YDSFEEEPG--FFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSL 632
D+ +E P + + D+++ + A+D EGL++K D D+ YEP KR
Sbjct: 526 EDNMKEVPNRVLLSNCNLIKKGETDKLEMLIWKAIDEGLEGLVLK--DLDSVYEPGKR-- 581
Query: 633 NWLKLKKDYIES--IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGT 690
+WLK+KKDY++ + DS DLV + AF+G G + G FL+ YD +F ++ K G
Sbjct: 582 HWLKVKKDYLKGGDMADSADLVLLGAFYGTGNKGGTMSVFLMGVYDKEKRKFCTVTKCGN 641
Query: 691 GFSEAMLEERSSSLRSKVIPKPRPYYRFADTIS------PD-VWFEPTERP 734
G +A L+ + L K+ R Y + I PD + +P E P
Sbjct: 642 GHDDATLDRINKELEPKMHKISRVYENLPEWIDCSRSLVPDFIVIDPKESP 692
>gi|194901756|ref|XP_001980417.1| GG17130 [Drosophila erecta]
gi|190652120|gb|EDV49375.1| GG17130 [Drosophila erecta]
Length = 805
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 210/462 (45%), Gaps = 43/462 (9%)
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF--D 310
+ + ++IK + + + ++ GD V++ R + RK P +K++ +
Sbjct: 91 LQNKALIKLFSRILNANQQQMHLDLEQDGD---VSETLRKHFAASRKLKPQVQSKLYLQE 147
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
+L+ K + ++++ + L ATD + + IRL++ LRI + +L A G
Sbjct: 148 VEQLLLKLVERTKEDEQTELLHELCSKATDLDLRTFIRLVKHDLRINARARHILDAFGSE 207
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
A Q S+ I A K K+ + I A N +N+ +
Sbjct: 208 AYPAYQSSRDLVAIVGQF--AGKDNKK-----DAHSPIKKA-------NKTNSSAIQVMT 253
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
PI PMLA P K V E K E KYDGER QIH + + +SRN +
Sbjct: 254 PISPMLASPCKSVEEAFKK-SPTGLYSEIKYDGERVQIHK-QGNEFKFFSRNLK------ 305
Query: 491 PDVVLAVSRLKK------PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
P V + LK+ P +LD EI+ D + +LPF +L ++ +
Sbjct: 306 PVVDHKIRALKEYIPQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAHKKQTFA----N 361
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
VC++ FD + +G+ L Q R RRE L + + Q + + E+
Sbjct: 362 AAVCLFVFDCILYDGEDLTQLPFRKRREILEQNIQPIKSHVQLSESEFLKTTKELAVMTA 421
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGK 662
+ A+ EG+++K+ +TY+P KR NWLK+KKDY+ + D+ DLV + A++G GK
Sbjct: 422 RVLHANLEGVVLKSP--TSTYQPGKR--NWLKVKKDYLFDGKMADTADLVVLGAWYGSGK 477
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ G FL+ CYD+ ++++ K+ +G +A E SL
Sbjct: 478 KGGTLSIFLMGCYDAFGRLWKTVTKVHSGLDDATNAEVHESL 519
>gi|440494286|gb|ELQ76685.1| ATP-dependent DNA ligase I [Trachipleistophora hominis]
Length = 296
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 164/313 (52%), Gaps = 27/313 (8%)
Query: 191 VPFIFLSL--VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEG 248
+P +F L VF I ++GR+ I I+ N L T+ E+++ YL + P +E
Sbjct: 1 MPTLFKDLCSVFKEIEEKSGRLEIQQILSNYLSTL---DKENMIIAFYLCTGTVYPTYEN 57
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKV 308
EL IG+ + K + + G+ +KK+Y E GDLG +A + ++ +++ + ++
Sbjct: 58 KELNIGEGILYKVIGDMTGKNIKVLKKEYAEYGDLGQIACKYKINK-LIKVEKSFELNEI 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
++ + I + GKD+ +KKN I +L + E +Y +RLL+ KL+IGLA QT+L ++G
Sbjct: 117 YNGLKKIGEIEGKDAMFRKKNAILKMLSVMSPNEIKYFVRLLEGKLKIGLAIQTVLISIG 176
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
V+ + E++ ++K+ + E ++ + DG+ +L + P
Sbjct: 177 M--VFENK------------EDSLDLLKKAYDRCASVEILLDKIYKDGIQSL-DLLEIVP 221
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
IP ML P + VN F D F CE KYDGER QIH D V+ YSRN E +T
Sbjct: 222 LIPFRAMLCNPLNSFT--VN-FSD--FICEVKYDGERIQIHKKND-QVKFYSRNGEDSTF 275
Query: 489 KFPDVVLAVSRLK 501
K+PD+V + + K
Sbjct: 276 KYPDLVAVIRKEK 288
>gi|198450544|ref|XP_002137109.1| GA26759 [Drosophila pseudoobscura pseudoobscura]
gi|198131083|gb|EDY67667.1| GA26759 [Drosophila pseudoobscura pseudoobscura]
Length = 788
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 217/460 (47%), Gaps = 37/460 (8%)
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTF 312
+ + ++IK + + + ++ GD+ + + S + KP + + +
Sbjct: 71 LQNKALIKLFSRIFNANQQQMHLDLEQDGDVSETLRKHFADSSKL-KPQKQSKLYLHEVE 129
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
+L+ + + ++++ ++ L ATD + + IRL++ LRI + +L A G A
Sbjct: 130 KLLTQLEERTKEDEQTELLQELCKKATDLDLRTFIRLVKQDLRINARARHILDAFGPDAY 189
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
Q S+ ++ + +E+ + + ++ V + L G+ ++ PI
Sbjct: 190 PAYQSSR---DLSAIVEQFSGKGNKTSTLGQVKKTKKVGLSGGGIQVMT---------PI 237
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
PMLA K V E K + E KYDGER QIH + + +SRN + P
Sbjct: 238 SPMLANACKSVEEAFKKSPSGLYG-EVKYDGERVQIHK-QGTEFKFFSRNLK------PV 289
Query: 493 VVLAVSRLKKPSVRSF------VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
+ + LK R+F +LD EI+ D E +LPF TL ++ +
Sbjct: 290 MDHKIKALKDHIPRAFPGAGDMILDSEIILVDTESGAMLPFGTLGAHKKQTFA----NAS 345
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD + +G+ L Q + RR+ L ++ + Q + + +E+
Sbjct: 346 VCLFVFDCILYDGKDLTQLEFHKRRKILEENINPLKSYVQLSESQFLKTKNELAMMTAKV 405
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGKRT 664
+ A+ EG+++K+ + Y+P KR NWLK+KKDY+ + D+ DLV + A++G GK+
Sbjct: 406 LHANLEGVVLKSPN--GIYQPGKR--NWLKVKKDYLFEGKMADTADLVVLGAWYGSGKKG 461
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
GV FL+ CYD+ + ++++ K+ +G +A EE SL
Sbjct: 462 GVLSIFLMGCYDARDRLWKTVTKVHSGLDDATNEEIHGSL 501
>gi|195166094|ref|XP_002023870.1| GL27179 [Drosophila persimilis]
gi|194106030|gb|EDW28073.1| GL27179 [Drosophila persimilis]
Length = 788
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 216/460 (46%), Gaps = 37/460 (8%)
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTF 312
+ + ++IK + + + ++ GD+ + + S + KP + + +
Sbjct: 71 LQNKALIKLFSRIFNANQQQMHLDLEQDGDVSETLRKHFADSSKL-KPQKQSKLYLHEVE 129
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
+L+ + + ++++ ++ L ATD + + IRL++ LRI + +L A G A
Sbjct: 130 KLLTQLEERTKEDEQTELLQELCKKATDLDLRTFIRLVKQDLRINARARHILDAFGPDAY 189
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
Q S+ ++ + +E+ + + + V + L G+ ++ PI
Sbjct: 190 PAYQSSR---DLSAIVEQFSGKGNKTSTQGQVKKTKKVGLSGGGIQVMT---------PI 237
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
PMLA K V E K + E KYDGER QIH + + +SRN + P
Sbjct: 238 SPMLANACKSVEEAFKKSPSGLYG-EVKYDGERVQIHK-QGTEFKFFSRNLK------PV 289
Query: 493 VVLAVSRLKKPSVRSF------VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
+ + LK R+F +LD EI+ D E +LPF TL ++ +
Sbjct: 290 MDHKIKALKDHIPRAFPGAGDMILDSEIILVDTESGAMLPFGTLGAHKKQTF----VNAS 345
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD + +G+ L Q + RR+ L ++ + Q + + +E+
Sbjct: 346 VCLFVFDCILYDGEDLTQLEFHKRRKILEENINPLKSYVQLSESQFLKTKNELAMMTAKV 405
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGKRT 664
+ A+ EG+++K+ + Y+P KR NWLK+KKDY+ + D+ DLV + A++G GK+
Sbjct: 406 LHANLEGVVLKS--PNGIYQPGKR--NWLKVKKDYLFEGKMADTADLVVLGAWYGSGKKG 461
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
GV FL+ CYD+ + ++++ K+ +G +A EE SL
Sbjct: 462 GVLSIFLMGCYDARDRLWKTVTKVHSGLDDATNEEIHGSL 501
>gi|242008936|ref|XP_002425250.1| DNA ligase, putative [Pediculus humanus corporis]
gi|212508998|gb|EEB12512.1| DNA ligase, putative [Pediculus humanus corporis]
Length = 927
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 195/404 (48%), Gaps = 40/404 (9%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LT+ +V + ++K +D Q K + T + + +IRL++ LRI +
Sbjct: 252 LTLQEVDEFLEKLSKMTKEDEQNY---HFKGITKKCTANDLKMIIRLIKHDLRINAGPKH 308
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL + A Q S+ +I+S + A K + K L ++ ++
Sbjct: 309 ILEALHKDAYKAFQTSR---DIKSVVYNAIK------AREKNNNKKNEKLNSEKGMDI-- 357
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
S P+ PMLA+P K V + K + F+ E KYDGER Q+H L D + + +SR+
Sbjct: 358 --SINMMTPVLPMLAQPCKSVEMALEKCPNGMFS-EIKYDGERVQLHKLGD-TFKYFSRS 413
Query: 483 AERNTGKFPDVVLAVSRLKK------PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
+ P + VS K+ P + +LD EI+ D K LPF TL +
Sbjct: 414 LK------PVLAHKVSHFKEYIPQAFPYGKDLILDAEILMVDNNTGKPLPFGTLGIHKKS 467
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+VC++ FD +Y NGQ LL L R+ L + E F+
Sbjct: 468 EFK----NANVCLFVFDCMYYNGQSLLTTCLSERKSILRQNMVEINNHIMFSEMEEINRA 523
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPI 654
+++++ + EGL++K D+ + YEP KR +WLK+KKDY+ ++ DS DLV +
Sbjct: 524 EDLEEMITKVFKQGLEGLVLK--DKKSVYEPGKR--HWLKVKKDYLCDGAMADSADLVVL 579
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
A+ G G + G+ +FL+ CYD+ ++++ ++ K+ +G E L+
Sbjct: 580 GAWFGTGHKGGIMSSFLMGCYDAKSKKWVTVTKVSSGHDEQTLD 623
>gi|224079383|ref|XP_002305845.1| predicted protein [Populus trichocarpa]
gi|222848809|gb|EEE86356.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 99/142 (69%), Gaps = 9/142 (6%)
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
L +++ FL+ A+ +SCEG+++K++D DA Y PSKR+ WLK+KKDY+E + DSLDLVPI
Sbjct: 16 LTKMKSFLEDALRSSCEGIMVKSLDIDAGYCPSKRTDAWLKVKKDYVEGLNDSLDLVPIG 75
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSK-------V 708
A+HG G++ G Y FL+ACY+ EEFQS+C++ +GFS+A E + L+ K +
Sbjct: 76 AWHGNGRKAGWYSPFLMACYNPETEEFQSVCRVMSGFSDAFYIEVITELQMKEFFSGDRI 135
Query: 709 IPKPRPYYRFADTISPDVWFEP 730
+ K PYYR + +PD+WF P
Sbjct: 136 LAKKPPYYRTVE--APDMWFSP 155
>gi|406993124|gb|EKE12333.1| hypothetical protein ACD_13C00238G0004, partial [uncultured
bacterium]
Length = 436
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 211/434 (48%), Gaps = 37/434 (8%)
Query: 209 RILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR 268
RI IT I+ N+L E+ ++ VVYL+ +AP ++G L + + +++ LA A +
Sbjct: 19 RIEITKILTNLLN---ESDQSEIDKVVYLSLGMLAPNYQGTILNLAEKMMLRTLAYAYQK 75
Query: 269 TESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKK 328
+ V Y++ GD+GLVA+ + + K LT+T V++ IA++ G SQE+K
Sbjct: 76 DLTEVTSLYKKEGDVGLVAQ--ELGERLKVKDKNLTVTDVYEKLLAIAEDGGGGSQERKV 133
Query: 329 NRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPL 388
++ L+ +++ R+ KLR+G +E+T++AAL E+ + NI+ +
Sbjct: 134 GKMAKLIGEIDPLSARFITRIPVGKLRLGFSEKTVIAALAAQDPKLEKEIEAAYNIRPDI 193
Query: 389 EEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVN 448
A +VK+ N +T G+P+ PMLA+ SE+V
Sbjct: 194 GYIAGLVKE---------------------NKLDTVEPEIGVPVAPMLAQRLNSTSEMVK 232
Query: 449 KFQDMEFTCEYKYDGERAQIHY-LEDGSVEIYSRNAER-NTGKFPDVVLAVSRLKKPSVR 506
K E + E K+DG R IHY +D ++I++RN + FP++ V +
Sbjct: 233 KMG--EVSVEPKFDGLRIFIHYRRKDNLIKIFTRNMNSIDIDTFPELK-EVGKFIHAD-- 287
Query: 507 SFVLDCEIVAYDREKQKILPFQ-TLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQE 565
+LD E + D +++ L FQ T+ R + ++ + ++ + FD++Y NG+ L+ E
Sbjct: 288 EAILDSEAIGVDPKREMFLDFQKTIQRRRKHDIGKTASEIPLQFQIFDLIYINGKSLINE 347
Query: 566 QLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATY 625
RRE L + + G + + + + D I+ + EG+++K + TY
Sbjct: 348 PYLKRREILEKTV-QNGGLLRIDENVITDNPDVIKDLHQKYLKMGLEGVVVKRA--NGTY 404
Query: 626 EPSKRSLNWLKLKK 639
+ NW+K+K+
Sbjct: 405 VSGRTGWNWVKMKE 418
>gi|340371652|ref|XP_003384359.1| PREDICTED: DNA ligase 3 [Amphimedon queenslandica]
Length = 968
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 214/449 (47%), Gaps = 43/449 (9%)
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAK 317
I+K L++A G + + + E GD+ AK +S+++ T+T +FD + +
Sbjct: 228 IVKILSQAYGCSLDDMVEDL-EKGDVAETAKKFFEEESVIKPAAKSTLT-LFDVDSFLDR 285
Query: 318 EAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQH 377
++++K +++ T + +Y+IRL++ LR + ++ AL A Q
Sbjct: 286 MEKLTKEDEQKKEFLSIIRKCTGNDIKYIIRLIKHDLRTNAGPKHIMDALDPNAYAAFQ- 344
Query: 378 SKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
+ LE+ +V++V S P L + + T P+ PMLA
Sbjct: 345 ------VSHDLED---VVQRVLSKSEEGAGGKPGLTKE------LSIRVTLMTPVKPMLA 389
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ + V+ + K + F E KYDGER Q+H + + + +SR+ + G V
Sbjct: 390 EACRSVAMAMKKCPNGMFA-EIKYDGERVQVHK-QGTTFQYFSRSLKPVQGH------KV 441
Query: 498 SRLKK------PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYA 551
+ +K P S +LDCE++ D + LPF TL +KN + C++
Sbjct: 442 AHIKDYLPQACPHGDSMILDCEVLMVDIKTGDPLPFGTLGIH-KKNAFKDAV---CCLFI 497
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASC 611
FD+LY NG+ LL + RR+ L ++ +E + +E+ + +
Sbjct: 498 FDLLYFNGESLLDTPIIKRRKLLEENVKEVKNHIMLSEAKLVKQPEELSDLIMTVIKKGL 557
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDL-VPIAAFHGRGKRTGVYG 668
EGL++K D + YEP KR +WLK+KKDY+E ++ D+ DL + + A++G G + G+
Sbjct: 558 EGLVLK--DTKSIYEPGKR--HWLKVKKDYLEGGAMADTADLLIVLGAYYGTGSKGGLMS 613
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAML 697
FL+ YD N+ F ++CK G G +A +
Sbjct: 614 VFLMGVYDKTNDRFCTVCKCGNGHDDATI 642
>gi|195500457|ref|XP_002097381.1| GE24522 [Drosophila yakuba]
gi|194183482|gb|EDW97093.1| GE24522 [Drosophila yakuba]
Length = 785
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 209/462 (45%), Gaps = 43/462 (9%)
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF--D 310
+ + ++IK + + + ++ GD V++ R + RK P +K++ +
Sbjct: 71 LQNKALIKLFSRILNANQQQMHLDLEQDGD---VSETLRKHFAASRKLKPQVQSKLYLQE 127
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
++ K + ++++ + L ATD + + IRL++ LRI + +L A G
Sbjct: 128 VEEMLLKLVERTKEDEQTKLLHELCSKATDLDLRTFIRLVKHDLRINARARHILDAFGPE 187
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
A P QS + A IV+Q + PA +N+ +
Sbjct: 188 AY---------PAYQSSRDLVA-IVRQFAGKENKKDAPSPAKKAKK----TNSSAIQVMT 233
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
PI PMLA P K V E K E KYDGER QIH + + +SRN +
Sbjct: 234 PISPMLASPCKSVEEAFKK-SPAGLYSEIKYDGERVQIHK-QGNDFKFFSRNLK------ 285
Query: 491 PDVVLAVSRLKK------PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
P V + LK+ P +LD EI+ D + +LPF +L ++ +
Sbjct: 286 PVVDHKIRALKEYIPQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAHKKQTFA----N 341
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
VC++ FD + +G+ L Q R RRE L + E Q + + E+
Sbjct: 342 AAVCLFVFDCILYDGEDLTQLPFRKRREILEQNIEPIKSHVQLSESEFLKTTRELAVMTA 401
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGK 662
+ A+ EG+++K+ +TY+P KR NWLK+KKDY+ + D+ DLV + A++G GK
Sbjct: 402 RVLHANLEGVVLKSPS--STYQPGKR--NWLKVKKDYLFDGKMADTADLVVLGAWYGSGK 457
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ G FL+ CYD+ ++++ K+ +G +A E SL
Sbjct: 458 KGGTLSIFLMGCYDAFGRLWKTVTKVHSGLDDATNAEVHDSL 499
>gi|448392823|ref|ZP_21567453.1| ATP-dependent DNA ligase I [Haloterrigena salina JCM 13891]
gi|445664142|gb|ELZ16862.1| ATP-dependent DNA ligase I [Haloterrigena salina JCM 13891]
Length = 589
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 227/499 (45%), Gaps = 67/499 (13%)
Query: 228 PEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRT--ESHVKKQYQEMGDLGL 285
P+ + V ++ PA + +L IG + +A+A A G V+++ E+G++G
Sbjct: 49 PQTVEIVARFVQGRVFPAWDSTKLDIGPTTCYEAIARAAGTNVGSDDVEERLAEVGEIGA 108
Query: 286 VAKA---------------SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNR 330
VA + + + LT+ +V +T +A G SQ++K +
Sbjct: 109 VAAGYEFGGQQGLGAFTGGGGGNGAGSAGGNDLTVREVSETLADLAAAEGSGSQDRKIDL 168
Query: 331 IKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEE 390
+ L + E +YL RL+ S++RIG+ E T+ A+ +A P+E
Sbjct: 169 LFGLFNRCSSEEARYLARLVLSEMRIGVGEGTVRDAISEA-------------FDVPVER 215
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF 450
V++ V Y ++ +G L + G P+ MLA+ V++ + ++
Sbjct: 216 ----VERALQVSNDYGQVARVARDEGREGL-DELDLEVGRPVQAMLAQAGT-VTDALEEW 269
Query: 451 QDMEFTCEYKYDGERAQIH-----YLEDGSVEIYSRNAERNTGKFPDVV-LAVSRLKKPS 504
E E+KYDG R Q+H D ++SRN E T P+VV A + L++P+
Sbjct: 270 D--EAAVEWKYDGARIQLHSDPEAAEADAETRVFSRNMEEVTDALPEVVEFAEATLEEPA 327
Query: 505 VRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILYRNGQPL 562
+LD E+VA D E LPFQ + R R+ ++ + DV + FD L+ G+ L
Sbjct: 328 ----ILDGEVVAID-ENDDPLPFQEVLKRFRRKHDVAKAREDVMVRPVFFDCLHAGGEDL 382
Query: 563 LQEQLRVRREHLYDSF-------EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLI 615
L+E L R E L ++E + T+ D DEI+ A++A EG++
Sbjct: 383 LEEPLTTRHERLRAVLADGEAPEQDEDEIEGLSLLWTTDDPDEIEAIDAEALEAGHEGIM 442
Query: 616 IKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY 675
+K D D+ Y P +R +W K K D ++LD V A G G+R G F L+
Sbjct: 443 LK--DPDSAYSPGRRGKHWRKRKPDV-----ETLDCVVTGAEWGEGRRATFLGTFELSVR 495
Query: 676 DSNNEEFQSICKIGTGFSE 694
++ +++ K+ TG ++
Sbjct: 496 AGDD--LETVGKVATGITD 512
>gi|194742640|ref|XP_001953809.1| GF17047 [Drosophila ananassae]
gi|190626846|gb|EDV42370.1| GF17047 [Drosophila ananassae]
Length = 788
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 177/383 (46%), Gaps = 40/383 (10%)
Query: 331 IKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEE 390
++ L ATD + + IRL++ LRI + +L A G A P QS +
Sbjct: 163 LQELCRKATDLDLRTFIRLVKQDLRINARARHILDAFGPEAY---------PAYQSS-RD 212
Query: 391 AAKIVKQVFSV-LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNK 449
A IVKQ S + VP + G N PI PMLA K V E K
Sbjct: 213 LASIVKQFASQGTRTKAQTVPKKVKKG-----NASGIQVMTPISPMLASACKSVEEAFKK 267
Query: 450 FQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKK------P 503
E KYDGER QIH + + +SRN + P + + LK P
Sbjct: 268 -SPAGLYSEIKYDGERVQIHK-QGKDFKFFSRNLK------PVMDHKIKDLKDYIPRAFP 319
Query: 504 SVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLL 563
+LD EI+ D + +LPF +L ++ + VC++ FD + +G+ L
Sbjct: 320 GAEEMILDSEIILVDTDTGALLPFGSLGAHKKQTFA----NAAVCLFVFDCILYDGEDLT 375
Query: 564 QEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDA 623
Q R RR+ L + + Q + + E+ + A+ EG+++K+ +
Sbjct: 376 QMPFRDRRDILEQNIKPIKSHVQLSESEFLKTKSELAMMTAKVLHANLEGVVLKSPS--S 433
Query: 624 TYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEE 681
TY+P KR NWLK+KKDY+ + D+ DLV + A++G GK+ GV FL+ CYDS +
Sbjct: 434 TYQPGKR--NWLKVKKDYLFDGKMADTADLVVLGAWYGSGKKGGVLSIFLMGCYDSKDRL 491
Query: 682 FQSICKIGTGFSEAMLEERSSSL 704
++++ K+ +G + EE +SL
Sbjct: 492 WKTVTKVHSGLDDITNEEVHNSL 514
>gi|344211456|ref|YP_004795776.1| DNA ligase [Haloarcula hispanica ATCC 33960]
gi|343782811|gb|AEM56788.1| DNA ligase [Haloarcula hispanica ATCC 33960]
Length = 554
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 142/512 (27%), Positives = 234/512 (45%), Gaps = 59/512 (11%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I E+ IT+ V +L + P DL + ++ P++E L IG +A+
Sbjct: 13 IEAESADTAITEAVTALL---TDAGP-DLSTLARFVQGRVFPSYESRTLDIGPRLCYEAI 68
Query: 263 AEACGRTES--HVKKQYQEMGDLGLVA--------KASRSSQSMMRKPDPLTITKVFDTF 312
A A G+ S V+++ ++G++G VA + + + D LT+ ++ D
Sbjct: 69 ARAAGQNVSTDDVEQRLADLGEIGAVAASYDLGGQQGLAAFGAGGGGDDALTVAELDDEL 128
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
R +A G SQ K + + L + E YL RL+ S++RIG+ E T+ A+ A
Sbjct: 129 RNLAAVDGSGSQGTKVDILFGLFSRCSSTEAGYLARLVLSEMRIGVGEGTVRDAVAAA-- 186
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
P+E V++ V Y + +G L+ T + G P+
Sbjct: 187 -----------FDVPVE----AVERAVQVSNDYGMVAEVARDEGESGLA-TVTLEIGRPV 230
Query: 433 GPMLAKPTKGVSEIVNKFQDME-FTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKF 490
MLA+ + +D + E+KYDG R Q+H+ DG ++SRN E T
Sbjct: 231 QAMLAQ----AGTVAGALEDWDRAAVEWKYDGARVQVHF--DGEDARLFSRNMEEVTDPL 284
Query: 491 PDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI 549
P+VV V S L P+ +LD E+VA D + LPFQ + R R+ ++ + DV +
Sbjct: 285 PEVVDTVESTLDAPA----ILDGEVVAVDADGDP-LPFQEVLRRFRRKHDVAAAREDVAV 339
Query: 550 --YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
+AFD L+ +G+ LL L+ R + L G + S D +EI+ A+
Sbjct: 340 RLHAFDCLHADGEDLLDASLKTRHDRLESLL--PAGSDVVSRMWLSDDAEEIENLEAEAL 397
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
A EG+++K D A Y P KR +W K K D ++LD V A G G+R V
Sbjct: 398 AAGQEGIMLK--DPTAAYSPGKRGKHWRKRKPDV-----ETLDCVVTGAEWGEGRRANVL 450
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
G+F L+ ++ + ++ + TG ++ L++
Sbjct: 451 GSFELSV--RTDDGYATVGNVATGITDEELDD 480
>gi|348531984|ref|XP_003453487.1| PREDICTED: DNA ligase 3 [Oreochromis niloticus]
Length = 1012
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 147/275 (53%), Gaps = 24/275 (8%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
P+ PMLA+ K + + K + ++ E KYDGER Q+H D + +SR+ +
Sbjct: 484 PVQPMLAEACKSIEYAMKKCPNGMYS-EIKYDGERVQVHKNGD-NFNYFSRSLK------ 535
Query: 491 PDVVLAVSRLKK------PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
P + V+ K+ P S +LD E++ D + K LPF TL K + D
Sbjct: 536 PVLPHKVAHFKEYIPQAFPGGHSMILDAEVLLIDTKTSKPLPFGTLGVH--KKAAFQD-- 591
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+VC++ FD +Y NG L++ L RR+ L+D+ E P F+ ++ +
Sbjct: 592 ANVCLFVFDCIYFNGVSLMERPLCERRKFLHDNMVEVPNRILFSEMKHVTRAGDLADMIT 651
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGK 662
+ EGL++K D +TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G
Sbjct: 652 RVIREGLEGLVLK--DVKSTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGKGS 707
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ +FL+ CYD +++++ ++ K G+ +AML
Sbjct: 708 NGGIMSSFLMGCYDPDSKKWCTVTKCSGGYDDAML 742
>gi|312094324|ref|XP_003147982.1| DNA ligase III [Loa loa]
Length = 572
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 189/411 (45%), Gaps = 79/411 (19%)
Query: 342 EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSV 401
E +Y+IRL+ LRI + +L L + A QHS+ N+Q+ +E+ + K+
Sbjct: 75 ELKYIIRLIMKDLRINAGAKHILEGLRKGAYEMFQHSR---NLQTVIEKCQQTDKE---- 127
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
LL G+ + NT P+ PMLA+P + V + + K E E KY
Sbjct: 128 ---------ELLESGI--ILNT-------PVKPMLAEPCRDVKQAMEKCS-KEMYAEIKY 168
Query: 462 DGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKK------PSVRSFVLDCEI 514
DGER Q+H +DGS +SR+ + P + V L K P+ R ++D E+
Sbjct: 169 DGERLQLH--KDGSNFRFFSRSLK------PALDHKVVDLNKVVSEAFPTSRDLIVDTEM 220
Query: 515 VAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHL 574
+ D K LPF TL +++ +++ LR RR+ L
Sbjct: 221 LLIDTNTGKPLPFGTLG-----------------------IHKKSSSRMRQSLRERRKFL 257
Query: 575 YDSFEEEPG--FFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSL 632
D+ +E P + + D+++ + A+D EGL++K D D+ YEP KR
Sbjct: 258 EDNMKEVPNRVLLSNCNLIKKGETDKLEMLIWKAIDEGLEGLVLK--DLDSVYEPGKR-- 313
Query: 633 NWLKLKKDYIES--IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGT 690
+WLK+KKDY++ + DS DLV + AF+G G + G FL+ YD +F ++ K G
Sbjct: 314 HWLKVKKDYLKGGDMADSADLVLLGAFYGTGNKGGTMSVFLMGVYDKEKRKFCTVTKCGN 373
Query: 691 GFSEAMLEERSSSLRSKVIPKPRPYYRFADTIS------PD-VWFEPTERP 734
G +A L+ + L K+ R Y + I PD + +P E P
Sbjct: 374 GHDDATLDRINKELEPKMHKISRVYENLPEWIDCSRSLVPDFIVIDPKESP 424
>gi|410914952|ref|XP_003970951.1| PREDICTED: DNA ligase 3-like [Takifugu rubripes]
Length = 983
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 142/273 (52%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K V + K + ++ E KYDGER Q+H D + +SR+ +
Sbjct: 461 PVQPMLAEACKSVEYAMKKCPNGMYS-EIKYDGERVQVHKNGD-NFSYFSRSLKPVLPHK 518
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D KV
Sbjct: 519 VAHFKDYIPQAF----PGGHSMILDAEVLLIDTQTSKPLPFGTLGIH--KKAAFQDAKV- 571
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
C++ FD +Y NG L++ L RR+ L+D+ E P F+ ++ +
Sbjct: 572 -CLFVFDCIYFNGTSLMERPLCERRKFLHDNMVEVPNRILFSEMKHVTRAADLADMITRV 630
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D YEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G
Sbjct: 631 IREGLEGLVLK--DVKGMYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNG 686
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ +FL+ CYD +++++ ++ K G+ +AML
Sbjct: 687 GIMSSFLMGCYDPDSKKWCTVTKCSGGYDDAML 719
>gi|196002285|ref|XP_002111010.1| hypothetical protein TRIADDRAFT_50031 [Trichoplax adhaerens]
gi|190586961|gb|EDV27014.1| hypothetical protein TRIADDRAFT_50031 [Trichoplax adhaerens]
Length = 924
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 209/463 (45%), Gaps = 58/463 (12%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
L+I V + IA + ++ +N ++ LL E ++LIR++ +L++GL+E +
Sbjct: 138 LSIADVNECLDNIAMANSQRKRDDVRNNLRKLLRNTCAMEQKWLIRMIMKELKVGLSENS 197
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+ + A +F+V K+ L+ V N
Sbjct: 198 IFSVFHPDA------------------------SDLFNVSSSLSKVCSDLMDPDV--RLN 231
Query: 423 TCSFTPGIPIGPMLAK--PTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY- 479
S +P PMLA+ P + V +++N +M F E K DG+R Q+H +DG+ +Y
Sbjct: 232 ETSIELFVPFRPMLAERCPLQQVEKLMN--HEM-FYIECKADGDRMQLH--KDGNKYMYF 286
Query: 480 SRNAERNTGKF---PD---VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP-FQTLST 532
SR+++ T F PD + + V+S +LD E+V YD E +P + +
Sbjct: 287 SRSSKEYTSSFGATPDEGSFTPFIVNVFSSQVQSAILDGEMVGYDMENDCYVPRGENIDV 346
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
+A V + + C FDIL NG+ L L R +L F PG
Sbjct: 347 KA---VGRTSAIIQQCYMVFDILMLNGKKLANHSLHERLGYLKQVFTPIPGRIMVVKQRQ 403
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKR-SLNWLKLKKDYIESIGDSLDL 651
+ ++ L+ A+D EG+IIK + +TY+P +R W K+K +Y++S+ D LDL
Sbjct: 404 ATSKKDVLDSLNEAIDTREEGIIIK--NPISTYKPDQRKGSGWFKIKPEYVDSLSDQLDL 461
Query: 652 VPIAAFHGRGKRTGVYGAFLLACY------DSNNEEFQSICKIGTGFSEAMLEERSSSLR 705
+ I + G G+R G+ FLL + + FQS CK+G+G++ A L+E L+
Sbjct: 462 LIIGGYFGVGRRGGLISHFLLGVAVPPENPSEHPKVFQSFCKVGSGYTIAELKELGEKLK 521
Query: 706 SKVIP----KPRPYYRFADTISPDVWFEPTERPETSNSPASIV 744
P K PY++ PD+W EP A IV
Sbjct: 522 PYWKPMNPKKLPPYFQLMSE-KPDLWIEPIHSKIVQIKAAEIV 563
>gi|150402142|ref|YP_001329436.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus maripaludis C7]
gi|166215373|sp|A6VFQ9.1|DNLI_METM7 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|150033172|gb|ABR65285.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus maripaludis C7]
Length = 573
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 147/527 (27%), Positives = 242/527 (45%), Gaps = 56/527 (10%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTV-METTPEDLVPVVYLAANKIAPAHEGLEL 251
FI + D I T R+ TD ++ + PE+L V + ++ E E+
Sbjct: 3 FIDFCKILDKIEKTTKRLEKTDYFVELIDFIKTNGKPENLKQVSQITIGRVFAEFENKEI 62
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGL-VAKASRSSQSMMRKPDPLTITKVFD 310
GIG +++A+ + G +E +K + +E GD+G+ V S + + + LT+ +V+
Sbjct: 63 GIGPNLLLEAV-KTTGISEKDLKSKIKETGDIGIAVENLSSNIKQVSLFSQALTLEEVYS 121
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
T + +++ G SQ+KK I LL+ AT E +Y+ RL+ +RIG+ T+LA+
Sbjct: 122 TLKKLSEIEGNSSQKKKTRIISNLLILATPVESRYISRLILEDMRIGMNIPTILASFSNY 181
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
N+ E KI + + EK++ N+ N +
Sbjct: 182 FNINK-------------ETVEKIYAVTNDIGLLGEKLISG------SNIENDSELQLKV 222
Query: 431 --PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
PI PMLA+ T + + + + +F E KYDG R Q+H DG+V+IYSR E T
Sbjct: 223 FRPIKPMLAQLTPSIEAAIIETKMPQF--ETKYDGARVQVHK-SDGNVKIYSRRLENITN 279
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVD 546
P++ V +KK + + +L+ E VA D K PFQ + R R+ + + K+
Sbjct: 280 SVPEL---VEEIKKIDIDNIILEGECVAMDLSSGKPRPFQDILRRFRRKYDIDKMAEKIA 336
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSF----------EEEPGFFQFATTLTSIDL 596
+ IY FD+LY + L+ L+ RRE L F + E F +S L
Sbjct: 337 LRIYFFDVLYYE-KGLIDTPLKDRREILEKLFGTNNWDTELSKIEKEIFSNKMLFSSFKL 395
Query: 597 DE-----IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDL 651
+ ++F + ++ EG++IK + DA Y P R K+K ++LD+
Sbjct: 396 NSDDPILAKEFFNWSLSIGHEGIMIK--NPDAPYTPGSRVKTMYKVKPTL-----ENLDV 448
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
V A G GKR YG++ ++ D + I +GTG +E LE
Sbjct: 449 VVTRAKIGMGKRKDWYGSYEISVKDYED-NLHVIGNVGTGLTEDDLE 494
>gi|195053390|ref|XP_001993609.1| GH20153 [Drosophila grimshawi]
gi|193895479|gb|EDV94345.1| GH20153 [Drosophila grimshawi]
Length = 799
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 207/455 (45%), Gaps = 24/455 (5%)
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTF 312
+ + +++K A + + ++ GD+ + + S + KP + + +
Sbjct: 71 LQNKALLKLFARILHVDQQQMNLDLEQDGDISETLRKHFAGSSKL-KPQAQSKLYLHEVE 129
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
L+ + + ++++ + AL ATD + + IRL++ LRI + +L A G A
Sbjct: 130 TLLCQLEQRTKEDEQTEVLHALCKQATDLDLRTFIRLIKQDLRINARARHILDAFGPQAY 189
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
Q S+ ++ + +E A Q S P PA G + P+
Sbjct: 190 PAYQSSR---DLTAIVENFAG--SQDTSTAPK----TPAKAAGGKKMKVASSGIQVMTPV 240
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE-RNTGKFP 491
PMLA K V E K D ++ E KYDGER QIH D + +SRN + K
Sbjct: 241 SPMLANACKSVEEAFKKNPDGLYS-EIKYDGERVQIHKQGD-EFKFFSRNLKPVMDHKIK 298
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYA 551
D+ + R P +LD EI+ D E +LPF TL + VC++
Sbjct: 299 DLKDYIPR-AFPGADDMILDSEIILVDTETGSLLPFGTLGAHKKHTFE----NASVCLFV 353
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASC 611
FD L +G L Q + R RRE L + + Q + + E+ + A+
Sbjct: 354 FDCLLYDGDDLTQVEFRKRREILEKNIKPIKSHVQLSESEFLKTKKELALMTAKVLQANL 413
Query: 612 EGLIIKTMDRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EG+++K + TY+P KR NWLK+KKDY+ + D+ DLV + A++G GK+ GV
Sbjct: 414 EGVVLK--NPAGTYQPGKR--NWLKVKKDYLFGGKMADTADLVVLGAWYGSGKKGGVLSI 469
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
FL+ C+D+ + ++++ K+ +G + ++ +L
Sbjct: 470 FLMGCFDARDHLWKTVTKVHSGLDDVTNDDVHEAL 504
>gi|88604115|ref|YP_504293.1| DNA ligase I, ATP-dependent (dnl1) [Methanospirillum hungatei JF-1]
gi|121696444|sp|Q2FTH4.1|DNLI_METHJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|88189577|gb|ABD42574.1| DNA ligase I, ATP-dependent (dnl1) [Methanospirillum hungatei JF-1]
Length = 547
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 233/510 (45%), Gaps = 52/510 (10%)
Query: 207 TGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEAC 266
+GR+ I+ T+ + +DL L K P G +LG+G + +A+A
Sbjct: 17 SGRLETISILAE---TISSLSDDDLPHFCRLILGKPFPEWSGKKLGVGPNLLYEAVAYVT 73
Query: 267 GRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQ 324
GR V + +GD G + S+ SQ+ + LT+ + I+ G SQ
Sbjct: 74 GRKREEVIDRLSRVGDAGAAVEELLSQKSQTSFFTVE-LTLADIMAALIEISGMEGGRSQ 132
Query: 325 EKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNI 384
++K I+ +L +A+ E Y+ +L RIG+ E L A+ QA + PN+
Sbjct: 133 KEKVRVIQRILSSASPLEGHYITAILLEDFRIGVGEGNLRDAIAQAFSVD-------PNL 185
Query: 385 QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVS 444
+E A ++ + V + K AL + P P+ MLA+ +G
Sbjct: 186 ---VEYANQVRNDMGEVAVLARKGEEAL---------RSVRLVPFHPVRMMLAR--QGTI 231
Query: 445 EIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPS 504
V K D E+KYDG R Q H ++ + +YSR E T PDV V+ L +
Sbjct: 232 SGVLKEGD-PVAVEFKYDGARFQFHK-QNKTCRMYSRRLEEVTNAMPDV---VALLDEAL 286
Query: 505 VRSFVLDCEIVAYDREKQKILPFQTLSTRARK--NVSLSDIKVDVCIYAFDILYRNGQPL 562
++D E++A + +PFQT+ R R+ NV+ + + + FDILY N + L
Sbjct: 287 PDDIIVDGEVIAV--QGGHPMPFQTVLRRFRRKHNVAEAADAITMIPNLFDILYYNQEML 344
Query: 563 LQEQLRVRREHLYDSFEEEPGFFQFAT-TLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR 621
+ R RR L ++ T L S D EI+ + A+DA EG+++K +
Sbjct: 345 IDLPFRERRNILTQVAS------RYVTPQLVSDDETEIEAYYHTALDAGHEGVMLKL--Q 396
Query: 622 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEE 681
+ Y P R +W+K+K + D+LDLV A G GKR V+G+FLL+ D ++
Sbjct: 397 GSRYTPGVRGKDWVKIKPE-----ADTLDLVVTGAEWGEGKRAHVFGSFLLSVRD--DDR 449
Query: 682 FQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
I ++ TGFS+ L +L+ +I K
Sbjct: 450 LVPISRVATGFSDEQLIWLFDTLQDDIIRK 479
>gi|435848842|ref|YP_007311092.1| ATP-dependent DNA ligase I [Natronococcus occultus SP4]
gi|433675110|gb|AGB39302.1| ATP-dependent DNA ligase I [Natronococcus occultus SP4]
Length = 597
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 233/518 (44%), Gaps = 83/518 (16%)
Query: 240 NKIAPAHEGLELGIGDASIIKALAEACGRTES--HVKKQYQEMGDLGLVAKA-------- 289
+I PA L +G ++ +A+A A G S V+++ E G++G VA +
Sbjct: 51 GRIFPAWTSRTLDVGPSACYEAIARAAGTNVSPDDVEERLAERGEIGDVAASYDFGGQRG 110
Query: 290 --SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLI 347
+ + T+ V +T R +A G SQ++K + + L + E +YL
Sbjct: 111 LGAFGGGGDAAGGEDRTVLAVDETLRELAAAEGAGSQDRKVDLLFGLFNRCSSDEARYLA 170
Query: 348 RLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK 407
RL+ +++RIG+ E T+ A+G+A P+E+ V++ V Y +
Sbjct: 171 RLVLAEMRIGVGEGTVRDAIGEA-------------FDVPVED----VERALQVSNDYGE 213
Query: 408 IVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFT-CEYKYDGERA 466
+ DG L + + G PI MLA+ + +D + E KYDG R
Sbjct: 214 VARVAREDGREGL-DAMTLAVGRPIQAMLAQ----TGTVTGALEDWDVAGVERKYDGARV 268
Query: 467 QIHY------LEDGSV----------EIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSFV 509
Q+H+ +ED ++SRN E T P++V A RL++P +
Sbjct: 269 QLHHDPIGVAVEDADATAVGESTAETRVFSRNMEDVTDALPEIVEFADDRLEEP----VI 324
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILYRNGQPLLQEQL 567
LD E+VA + + LPFQ + R R+ ++ + DV + FD L+ +G+ LL+E L
Sbjct: 325 LDGEVVAIADDGEP-LPFQEVLKRFRRKHDVAKAREDVAVRPVFFDCLHADGEDLLEEPL 383
Query: 568 RVRREH----LYDSFEEEPGFFQFATTLTSIDL-DEIQKFLDAAVDASCEGLIIKTMDRD 622
R + L + E+EP + + L D DEI++ A++A EG+++K D
Sbjct: 384 ATRHDRLERVLREDPEQEPAQIEGLSLLWRTDDPDEIERIDAEALEAGHEGIMLKAP--D 441
Query: 623 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEE- 681
+TY P +R +W K K D ++LD V A G G+R G F L+ ++E+
Sbjct: 442 STYSPGRRGKHWRKRKPDV-----ETLDCVVTGAEWGEGRRATFLGTFELSVRAGDSEKR 496
Query: 682 -----------FQSICKIGTGFSEAMLEERSSSLRSKV 708
+++ K+ TG ++ L E + L V
Sbjct: 497 RSAGSAVEPQNLETVGKVATGITDEKLAELTELLEPHV 534
>gi|392838|gb|AAA67138.1| ATP-dependent DNA ligase [Rabbit fibroma virus]
Length = 559
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 153/286 (53%), Gaps = 16/286 (5%)
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
S+ S PG P+ PMLA + VS IVNK++ + E KYDGER QIH +D E YS
Sbjct: 199 SDEVSTGPGTPVKPMLADICRSVSTIVNKYKRGIYA-EIKYDGERVQIHKYDD-VYEFYS 256
Query: 481 RNAERNT-GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVS 539
RN T K + A+S + PS +F+LD E+V D + LPF +L + +
Sbjct: 257 RNLRPVTPHKVQGLDEALS-IAFPSANNFILDAELVLVDEHTGECLPFGSLGVHKKASFK 315
Query: 540 LSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEI 599
S C++ FD L+ N + LL+ RR + + +E + T +I
Sbjct: 316 SST----PCLFVFDCLFYNDKSLLRVPFVQRRAFVETTIKEIKHKIVLSDIRTIRSESDI 371
Query: 600 QKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES---IGDSLDLVPIAA 656
+ L+ +V+ EGL++K D Y+P R WLK+KKD++++ + DS DLV + A
Sbjct: 372 TEALNESVEKGLEGLMLKG--GDDVYKPGLR--GWLKIKKDHLKTPITMADSADLVVLGA 427
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSS 702
++G+G + G+ FL+ CYD ++ ++++ K +G ++ ML+E S
Sbjct: 428 YYGKGCKGGIMAVFLMGCYDEEDDNWKTVTKC-SGHTDKMLQELQS 472
>gi|9633943|ref|NP_052022.1| gp133R [Rabbit fibroma virus]
gi|6578662|gb|AAF18016.1|AF170722_134 gp133R [Rabbit fibroma virus]
Length = 559
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 153/286 (53%), Gaps = 16/286 (5%)
Query: 421 SNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYS 480
S+ S PG P+ PMLA + VS IVNK++ + E KYDGER QIH +D E YS
Sbjct: 199 SDEVSTGPGTPVKPMLADICRSVSTIVNKYKRGIYA-EIKYDGERVQIHKYDD-VYEFYS 256
Query: 481 RNAERNT-GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVS 539
RN T K + A+S + PS +F+LD E+V D + LPF +L + +
Sbjct: 257 RNLRPVTPHKVQGLDEALS-IAFPSANNFILDAELVLVDEHTGECLPFGSLGVHKKASFK 315
Query: 540 LSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEI 599
S C++ FD L+ N + LL+ RR + + +E + T +I
Sbjct: 316 SST----PCLFVFDCLFYNDKSLLRVPFVQRRAFVETTIKEIKHKIVLSDIRTIRSESDI 371
Query: 600 QKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES---IGDSLDLVPIAA 656
+ L+ +V+ EGL++K D Y+P R WLK+KKD++++ + DS DLV + A
Sbjct: 372 TEALNESVEKGLEGLMLKG--GDDVYKPGLR--GWLKIKKDHLKTPITMADSADLVVLGA 427
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSS 702
++G+G + G+ FL+ CYD ++ ++++ K +G ++ ML+E S
Sbjct: 428 YYGKGCKGGIMAVFLMGCYDEEDDNWKTVTKC-SGHTDKMLQELQS 472
>gi|449277604|gb|EMC85707.1| DNA ligase 4 [Columba livia]
Length = 912
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 219/485 (45%), Gaps = 59/485 (12%)
Query: 279 EMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA 338
+ GD ++A +S K LTI +V + IA ++ K + L+ +
Sbjct: 126 DAGDFAMIAYFVLKPRS--PKQGRLTIEQVNEHLDTIANNNAAKNKGLLKKSLLQLITQS 183
Query: 339 TDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQV 398
T E ++LIR++ L++G+++QT+ + A+ E H N+ + LE K+ +Q
Sbjct: 184 TALEQKWLIRMIIKDLKLGISQQTIFSIFHPDAL--ELH-----NVTTDLE---KVCRQ- 232
Query: 399 FSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
L D +LS+ S T PMLA V +I + + F E
Sbjct: 233 --------------LHDPSVSLSDV-SITLFSAFKPMLA-AIADVQQIEKQMNNQIFYIE 276
Query: 459 YKYDGERAQIHYLEDGSV-EIYSRNAERNTGKFPDVVLA------VSRLKKPSVRSFVLD 511
K DGER Q+H +DG V + +SRN T +F L + + K ++++ +LD
Sbjct: 277 TKLDGERMQLH--KDGDVYKYFSRNGFDYTQQFGASPLDGSLTPFIHNVFKSNIQNCILD 334
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
E++AY+ E Q F R + D + C FD+L N Q L E L R
Sbjct: 335 GEMMAYNPETQ---TFMQKGNRFDIKRMVEDSDLQTCFCVFDVLMVNDQKLAHEILTKRY 391
Query: 572 EHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRS 631
E L F G ++ E+ L+ A+D EG+++K D +TY+P KR
Sbjct: 392 EILSSVFTPLAGRIHVVHKKSARTRKEVIDALNEAIDNREEGIMVK--DPMSTYKPDKRG 449
Query: 632 LNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDS--NNEE---FQSIC 686
WLK+K +Y+ + D LDL+ + + G+G R G+ FL A ++ NE+ F SIC
Sbjct: 450 EGWLKIKPEYVNGLMDELDLLIVGGYWGKGSRGGMMSHFLCAIAETPPPNEKPTIFHSIC 509
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYR-------FADTISPDVWFEPTERPETSNS 739
++G+G++ L + L K+ +PY+R T P+++ EP
Sbjct: 510 RVGSGYTMKELYD----LGLKLAKHWKPYHRRDPPGNILCGTEKPEMYIEPCNSVIVQIK 565
Query: 740 PASIV 744
A IV
Sbjct: 566 AAEIV 570
>gi|21064069|gb|AAM29264.1| AT15112p [Drosophila melanogaster]
Length = 696
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 187/389 (48%), Gaps = 38/389 (9%)
Query: 324 QEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPN 383
++++ + ++ L ATD + + IRL++ LRI + +L A G A Q S+ +
Sbjct: 51 EDEQTDLLQKLCSKATDLDLRTFIRLVKHDLRINARARHILDAFGPDAYPAYQSSR---D 107
Query: 384 IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
+ + +E+ A + ++ PV + +++ + PI PMLA P K V
Sbjct: 108 LVAIVEQFATKENKNYASSPVKKT-----------KKTSSSAIQVMTPISPMLASPCKSV 156
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKK- 502
+ K ++ E KYDGER QIH + + +SRN + P V + LKK
Sbjct: 157 EDAFKKSPTGLYS-EIKYDGERVQIHK-QGNDFKFFSRNLK------PVVDHKIRALKKY 208
Query: 503 -----PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYR 557
P +LD EI+ D + +LPF +L ++ + VC++ FD +
Sbjct: 209 IPQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAHKKQTFA----NAAVCLFVFDCILY 264
Query: 558 NGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIK 617
+G+ L Q R RRE L + + Q + + E+ + A+ EG+++K
Sbjct: 265 DGEDLTQLPFRKRREILEQNIQPIKSHVQLSESEFLKTTRELAAMTARVLHANLEGVVLK 324
Query: 618 TMDRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY 675
+ +TY+P KR NWLK+KKDY+ + D+ DLV + A++G GK+ G FL+ CY
Sbjct: 325 S--PTSTYQPGKR--NWLKVKKDYLFDGKMADTADLVVLGAWYGSGKKGGTLSIFLMGCY 380
Query: 676 DSNNEEFQSICKIGTGFSEAMLEERSSSL 704
D+ ++++ K+ +G +A E SL
Sbjct: 381 DAFGRLWKTVTKVHSGLDDATNAEVHKSL 409
>gi|297700536|ref|XP_002827303.1| PREDICTED: DNA ligase 3 isoform 3 [Pongo abelii]
Length = 949
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 188/401 (46%), Gaps = 40/401 (9%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL A + S+ N+Q +E ++V P + +
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRAL------------- 471
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
+ +P P+ PMLA+ K V + K + F+ E KYDGER Q+H D +SR+
Sbjct: 472 SVQASPMTPVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRS 529
Query: 483 AE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+ F D + P S +LD E++ D + K LPF TL K
Sbjct: 530 LKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKA 583
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
+ D +VC++ FD +Y N L+ L RR+ L+D+ E P F+ +
Sbjct: 584 AFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKASD 641
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAA 656
+ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + A
Sbjct: 642 LADMITRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGA 697
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
F+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 698 FYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 738
>gi|345489172|ref|XP_001601405.2| PREDICTED: DNA ligase 3 [Nasonia vitripennis]
Length = 1031
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 193/410 (47%), Gaps = 36/410 (8%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LT+ +V + ++K +D Q + K++L T + + +IRL++ LRI +
Sbjct: 277 LTLQEVDEFLEQLSKLTKEDEQ---MDHFKSILKRCTADDLKMIIRLIKHDLRINAGPKH 333
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L A+ A Q S+ P I + I + + + V LS
Sbjct: 334 ILGAVHDDAYMAFQVSRDLPAI---IRRCLGISPTASTSSAATSPLAKSPKAGKVATLSL 390
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
P+ PMLA+ K V + K + + E KYDGER Q+H + YSR+
Sbjct: 391 M------TPVLPMLAEACKSVEMAMQKCPNGMLS-EVKYDGERLQVHKM-GSDFRYYSRS 442
Query: 483 AERNTGKFPDVVLAVSRLKK------PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
+ P + V+ LK+ P +LD EI+ D + LPF +L K
Sbjct: 443 LK------PVLPHKVNFLKEYIPKAFPQGDDLILDAEILLIDTRNGQPLPFGSLGVH--K 494
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
D +VC++ FDI+Y NG+PL+ ++ RR+ L + P + D
Sbjct: 495 KAEFKD--ANVCLFVFDIIYYNGEPLMDRTMQQRRKLLEEKMTPIPNRIMLSEIQVIKDP 552
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPI 654
++ + EGL++K D D+ YEP KR +WLK+KKDY+ ++ D+ DLV +
Sbjct: 553 KKLAAMIAKVFKLRLEGLVLK--DVDSKYEPGKR--HWLKIKKDYLLQGAMADNADLVVL 608
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
A++G G++ G+ FL+ CYD +++ + ++ K+ TG +A L + +SL
Sbjct: 609 GAWYGTGQKGGMMSVFLMGCYDPDSDIWVTVTKVHTGHDDATLAKLQTSL 658
>gi|357620387|gb|EHJ72599.1| hypothetical protein KGM_01326 [Danaus plexippus]
Length = 543
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 110/173 (63%)
Query: 176 EFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV 235
+++P ACW+K + VP++ L+ ++I + R+ + +I+ N ++V+ TPEDL+P +
Sbjct: 371 KYNPIKDACWKKSQDVPYLALAKTLEVIEATSARLKMVEILSNYFKSVIALTPEDLLPSI 430
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL N++APA++ LELGI + ++KA+ + GRT + +K Q GDLGLVA+ +R++Q
Sbjct: 431 YLCLNQLAPAYKSLELGIAETYLMKAVGQCTGRTLAQMKAAAQRCGDLGLVAEQARATQR 490
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIR 348
M P PLT+ KV R +A G+ S KK +I++L VA E +YLIR
Sbjct: 491 TMFAPPPLTVRKVITALRDVAAMTGQASVNKKIGKIQSLYVACRHSEARYLIR 543
>gi|448399748|ref|ZP_21571008.1| ATP-dependent DNA ligase I [Haloterrigena limicola JCM 13563]
gi|445668765|gb|ELZ21392.1| ATP-dependent DNA ligase I [Haloterrigena limicola JCM 13563]
Length = 579
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 239/530 (45%), Gaps = 69/530 (13%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVP-----VVYLAANKIAPAHEGLELGIGDAS 257
I +E + I V ++L + T E P V A ++ PA + L IG ++
Sbjct: 13 IDDEAADLEIVTHVRDLLADAGDDTDEGAEPQTLELVARFAQGRVFPAWDSTTLDIGPSA 72
Query: 258 IIKALAEACGR--TESHVKKQYQEMGDLGLVAKA---------SRSSQSMMRKPDPLTIT 306
+A+A A G + V+ + E+G++G VA + S + + D LT+
Sbjct: 73 CYEAIARAAGTNISADDVEDRLAEVGEIGDVAASYDFGGQQGLSAFTGGGVGGDDDLTVR 132
Query: 307 KVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAA 366
+V++T +A G SQ++K + + L + E +YL R++ S++RIG+ E T+ A
Sbjct: 133 EVYETLEDLAHAEGSGSQDRKVDLLFGLFNRCSSEEARYLARIVLSEMRIGVGEGTVRDA 192
Query: 367 LGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF 426
+ AA ++ + V++ V Y ++ +G L +
Sbjct: 193 I--AAAFDVPEDR---------------VERALQVSNDYGRVARIARDEGREGL-DAMDL 234
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS----VEIYSRN 482
G P+ MLA+ + E E+KYDG R Q+HY GS ++SRN
Sbjct: 235 EVGRPVQAMLAQAGTVTDALEEW---EEAAVEWKYDGARIQLHYEPGGSESAETRVFSRN 291
Query: 483 AERNTGKFPDVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLS 541
E T P+VV A L+ P+ +LD E+VA D E LPFQ + R R+ ++
Sbjct: 292 MEEVTDALPEVVEFADGTLEGPA----ILDGEVVAID-EDGSPLPFQEVLKRFRRKHDVA 346
Query: 542 DIKVDVCI--YAFDILYRNGQPLLQEQLRVRREHL----------YDSFEEEPGFFQFAT 589
+ DV + FD L+ +G+ LL E L R + L D+ ++E +
Sbjct: 347 KAREDVTVRPVFFDCLHADGEDLLAEPLTTRHDRLRSVLAGSGGDTDAVDDED-VEGLSL 405
Query: 590 TLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSL 649
+ D DEI+ A++ EG+++K D D+TY P +R +W K K D ++L
Sbjct: 406 LWLTDDPDEIESIDADALEGGHEGIMLK--DPDSTYSPGRRGKHWRKRKPDV-----ETL 458
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
D V A G G+R G F L+ ++ +++ K+ TG ++ L E
Sbjct: 459 DCVVTGAEWGEGRRATFLGTFELSV--QAGDDLETVGKVATGITDDKLAE 506
>gi|297700534|ref|XP_002827302.1| PREDICTED: DNA ligase 3 isoform 2 [Pongo abelii]
Length = 1009
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 188/401 (46%), Gaps = 40/401 (9%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL A + S+ N+Q +E ++V P + +
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRAL------------- 471
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
+ +P P+ PMLA+ K V + K + F+ E KYDGER Q+H D +SR+
Sbjct: 472 SVQASPMTPVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRS 529
Query: 483 AE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+ F D + P S +LD E++ D + K LPF TL K
Sbjct: 530 LKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKA 583
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
+ D +VC++ FD +Y N L+ L RR+ L+D+ E P F+ +
Sbjct: 584 AFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKASD 641
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAA 656
+ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + A
Sbjct: 642 LADMITRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGA 697
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
F+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 698 FYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 738
>gi|452207603|ref|YP_007487725.1| DNA ligase (ATP) [Natronomonas moolapensis 8.8.11]
gi|452083703|emb|CCQ37017.1| DNA ligase (ATP) [Natronomonas moolapensis 8.8.11]
Length = 552
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 157/531 (29%), Positives = 234/531 (44%), Gaps = 53/531 (9%)
Query: 229 EDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEAC--GRTESHVKKQYQEMGDLGLV 286
EDL V ++ PAHE L IG A +ALA A + V+ + E+G++G V
Sbjct: 35 EDLAVVTRFVRGRVFPAHEPTTLDIGPALCYEALARAARPNVAAADVEAKLAEIGEIGAV 94
Query: 287 AK-----ASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC 341
A+ R S D LT+ V R +A G S + K + L A
Sbjct: 95 AEELDLGGQRGLASFGDGDDGLTVAGVDAELRALAGAEGVGSTDTKVETLFGLFNRAGPT 154
Query: 342 EPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSV 401
E ++L RL+ +RIG+ E + A AA ++ P E V++ V
Sbjct: 155 EARFLARLVLGNMRIGVGEGAVRDA--TAAAFD-----------VPSE----AVERAMQV 197
Query: 402 LPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
+ ++G L + G P+ MLA+ V I E K+
Sbjct: 198 SNDAGLVAETARSEGEPGLGD-VRLAVGRPVEAMLAQAGSAVDAIEAWGS---VAVEPKF 253
Query: 462 DGERAQIHYLEDG-SVEIYSRNAERNTGKFPDVVLAVSR-LKKPSVRSFVLDCEIVAYDR 519
DG R Q+HY DG ++SRN E T P+VV V+ L +P++ LD E+VA D
Sbjct: 254 DGARVQLHY--DGVETRLFSRNLEEVTDALPEVVETVAAALDRPAI----LDGEVVAVD- 306
Query: 520 EKQKILPFQTLSTRARK--NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREH---L 574
E PFQ + R R+ +V+ + V V YAFD L+ +G LL L RRE L
Sbjct: 307 EDGSPRPFQDVLRRFRRKHDVAAAREAVPVEFYAFDCLHADGDDLLDAPLLERRERLSAL 366
Query: 575 YDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNW 634
+ +PG A + ++EI +AA+ A EG+++K + ++ Y P R NW
Sbjct: 367 LGGDDADPG--GVADVRIAESVEEIAAREEAALAAGHEGIMLK--NPESAYTPGDRGRNW 422
Query: 635 LKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
LK K D ++LDLV A G G+R +G FLL+ D E F+ I K+ TG ++
Sbjct: 423 LKRKPDV-----ETLDLVVTGAEWGEGRRANHFGTFLLSIRD--GEAFEPIGKVATGITD 475
Query: 695 AMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASIVY 745
LE L S V + + +V +E +R T S ++ +
Sbjct: 476 EELERLHERLVSHVRSESGTDVEIDPAVVFEVGYEEIQRSPTYGSGYALRF 526
>gi|85815841|ref|NP_650187.2| DNA ligase III [Drosophila melanogaster]
gi|84796152|gb|AAF54801.3| DNA ligase III [Drosophila melanogaster]
gi|283135256|gb|ADB11088.1| UT01767p [Drosophila melanogaster]
Length = 806
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 187/389 (48%), Gaps = 38/389 (9%)
Query: 324 QEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPN 383
++++ + ++ L ATD + + IRL++ LRI + +L A G A Q S+ +
Sbjct: 161 EDEQTDLLQKLCSKATDLDLRTFIRLVKHDLRINARARHILDAFGPDAYPAYQSSR---D 217
Query: 384 IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
+ + +E+ A + ++ PV + +++ + PI PMLA P K V
Sbjct: 218 LVAIVEQFATKENKNYASSPVKKT-----------KKTSSSAIQVMTPISPMLASPCKSV 266
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKK- 502
+ K ++ E KYDGER QIH + + +SRN + P V + LKK
Sbjct: 267 EDAFKKSPTGLYS-EIKYDGERVQIHK-QGNDFKFFSRNLK------PVVDHKIRALKKY 318
Query: 503 -----PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYR 557
P +LD EI+ D + +LPF +L ++ + VC++ FD +
Sbjct: 319 IPQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAHKKQTFA----NAAVCLFVFDCILY 374
Query: 558 NGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIK 617
+G+ L Q R RRE L + + Q + + E+ + A+ EG+++K
Sbjct: 375 DGEDLTQLPFRKRREILEQNIQPIKSHVQLSESEFLKTTRELAAMTARVLHANLEGVVLK 434
Query: 618 TMDRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY 675
+ +TY+P KR NWLK+KKDY+ + D+ DLV + A++G GK+ G FL+ CY
Sbjct: 435 S--PTSTYQPGKR--NWLKVKKDYLFDGKMADTADLVVLGAWYGSGKKGGTLSIFLMGCY 490
Query: 676 DSNNEEFQSICKIGTGFSEAMLEERSSSL 704
D+ ++++ K+ +G +A E SL
Sbjct: 491 DAFGRLWKTVTKVHSGLDDATNAEVHKSL 519
>gi|395536076|ref|XP_003770046.1| PREDICTED: DNA ligase 3 [Sarcophilus harrisii]
Length = 1003
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 194/417 (46%), Gaps = 58/417 (13%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q+ I + A + + +IRL++ L++ +
Sbjct: 370 LTIQEVDEFLLQLSKLTKEDDQQSVLQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 426
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLE---------EAAKIVKQVFSVLPVYEKIVPALL 413
+L AL A + S+ N+Q +E E A +K+ SV AL+
Sbjct: 427 VLDALDPNAYEAFKASR---NLQDVVERVLANQQESEKAPGMKRALSVQA-------ALM 476
Query: 414 TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
T P+ PMLA+ K + + K + F+ E KYDGER Q+H D
Sbjct: 477 T----------------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD 519
Query: 474 GSVEIYSRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQT 529
+SR+ + F D + P +S +LD E++ D + K LPF T
Sbjct: 520 -QFSYFSRSLKPVLPHKVAHFKDYIPQAF----PGGQSMILDSEVLLIDTKTSKPLPFGT 574
Query: 530 LSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFAT 589
L K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 575 LGVH--KKAAFQD--ANVCLFVFDCIYFNDISLMDRPLCERRKFLHDNMVEIPNRILFSE 630
Query: 590 TLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGD 647
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D
Sbjct: 631 MKHVTKASDLADMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMAD 686
Query: 648 SLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ DLV + AF+G+G + G+ FL+ CYD +++++ ++ K G +A L + L
Sbjct: 687 TADLVVLGAFYGQGNKGGMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATLARLQNEL 743
>gi|448667084|ref|ZP_21685685.1| DNA ligase [Haloarcula amylolytica JCM 13557]
gi|445770606|gb|EMA21665.1| DNA ligase [Haloarcula amylolytica JCM 13557]
Length = 554
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 220/485 (45%), Gaps = 55/485 (11%)
Query: 230 DLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES--HVKKQYQEMGDLGLVA 287
DL + ++ PA+E L IG +A+A A G+ S V+++ +MG++G VA
Sbjct: 36 DLPTLTRFVQGRVFPAYESRTLDIGPRLCYEAIARAAGQNVSADDVEQRLADMGEIGAVA 95
Query: 288 --------KASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAAT 339
+ + + D LT+ ++ +T R +A G SQ K + + L +
Sbjct: 96 ASYDLGGQRGLAAFGAGGSGSDALTVAELDETLRDLAAVDGSGSQGTKVDILFGLFSRCS 155
Query: 340 DCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVF 399
E YL RL+ S++RIG+ E T+ A+ A P+ V++
Sbjct: 156 PAEASYLARLVLSEMRIGVGEGTVRDAVAAA-------------FDVPV----AAVERAV 198
Query: 400 SVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDME-FTCE 458
V Y + +G L+ T + G P+ MLA+ + D + E
Sbjct: 199 QVSNDYGMVAEVARDEGESGLA-TITLEIGRPVQAMLAQ----AGTVAGALDDWDRAAVE 253
Query: 459 YKYDGERAQIHYLEDG-SVEIYSRNAERNTGKFPDVVLAV-SRLKKPSVRSFVLDCEIVA 516
+KYDG R QIH+ DG ++SRN E T P+VV V S L P+ +LD E+VA
Sbjct: 254 WKYDGARVQIHF--DGEDARLFSRNMEEVTDPLPEVVDTVESTLDAPA----ILDGEVVA 307
Query: 517 YDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILYRNGQPLLQEQLRVRREHL 574
+ LPFQ + R R+ ++ + DV + +AFD L+ +G+ LL L R + L
Sbjct: 308 VAADGDP-LPFQEVLRRFRRKHDVAAAREDVAVRLHAFDCLHADGEDLLDAPLETRHDRL 366
Query: 575 YDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNW 634
F G + S D DEI A+ A EG+++K D A Y P KR +W
Sbjct: 367 ESLF--PAGRDVVSQMWLSDDPDEIADLEAEALAAGQEGIMLK--DPTAAYSPGKRGKHW 422
Query: 635 LKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
K K D ++LD V A G G+R V G+F L+ ++ + ++ + TG ++
Sbjct: 423 RKRKPDV-----ETLDCVVTGAEWGEGRRANVLGSFELSV--RTDDGYATVGNVATGITD 475
Query: 695 AMLEE 699
L++
Sbjct: 476 EELDD 480
>gi|334324598|ref|XP_001373823.2| PREDICTED: DNA ligase 3 [Monodelphis domestica]
Length = 1217
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 197/409 (48%), Gaps = 42/409 (10%)
Query: 303 LTITKVFDTFRL-IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQ 361
LTI +V D F L ++K +D Q+ N ++ + T + + +IRL++ L++ +
Sbjct: 374 LTIQEV-DAFLLQLSKLTKEDDQQ---NVLQDIASRCTANDLKCIIRLIKHDLKMNSGAK 429
Query: 362 TLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLS 421
+L AL A + S+ N+Q +V++V + EK VP + L+
Sbjct: 430 HVLDALDPNAYEAFKASR---NLQD-------VVERVLANQQESEK-VPGMKR----TLN 474
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
S P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR
Sbjct: 475 VQASLM--TPVQPMLAEACKSIDYAMKKCPNGMFS-EIKYDGERVQVHKNGD-QFSYFSR 530
Query: 482 NAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
+ + F D + P S +LD E++ D + K LPF TL K
Sbjct: 531 SLKPVLPHKVAHFKDYIPQAF----PGGHSMILDAEVLLIDTKTGKPLPFGTLGVH--KK 584
Query: 538 VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD 597
+ D +VC++ FD +Y N L+ L RR+ L+D+ + P F+
Sbjct: 585 AAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVQIPNRILFSEMKHVTKAS 642
Query: 598 EIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIA 655
+ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV +
Sbjct: 643 HLANMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 698
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
AF+G+G + G+ FL+ CYD +++++ ++ K G +A L + L
Sbjct: 699 AFYGQGNKGGMMSIFLMGCYDPSSKKWCTVTKCSGGHDDATLARLQNEL 747
>gi|410980494|ref|XP_003996612.1| PREDICTED: DNA ligase 3 isoform 3 [Felis catus]
Length = 1022
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 192/404 (47%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V D F L + K+ ++++ + A A D + +IRL++ L++ +
Sbjct: 380 LTIQEV-DAFLLCLSKLTKEDEQQQALQDIASRCTANDL--KCIIRLIKHDLKMNSGAKH 436
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E + ++V P + + +L+T
Sbjct: 437 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKEPGRRRALSVQASLMT----- 487
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 488 -----------PVQPMLAEACKSIEHAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 534
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 535 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDTKTGKPLPFGTLGVH-- 588
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 589 KKAAFQD--ANVCLFVFDCIYFNDISLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTK 646
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 647 ASDLADMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 702
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 703 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCSGGHDDATL 746
>gi|444720955|gb|ELW61715.1| DNA ligase 3 [Tupaia chinensis]
Length = 926
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 192/401 (47%), Gaps = 40/401 (9%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ + I + A + + +IRL++ L++ +
Sbjct: 285 LTIQEVDEFLLRLSKLTKEDEQQQALHDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 341
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL A + S+ N+Q +E + ++V EK T LS
Sbjct: 342 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-------EKQPGRRRT-----LSV 386
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
S P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+
Sbjct: 387 QASLM--TPVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRS 442
Query: 483 AE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+ F D + P S +LD E++ D + K LPF TL K
Sbjct: 443 LKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKA 496
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
+ D +VC++ FD +Y N L+ L RR+ L+D+ E P F+ +
Sbjct: 497 AFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASD 554
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAA 656
+ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + A
Sbjct: 555 LADMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGA 610
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
F+G+G + G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 611 FYGQGSKGGMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATL 651
>gi|9633769|ref|NP_051847.1| m133R [Myxoma virus]
gi|6523988|gb|AAF15021.1|AF170726_137 m133R [Myxoma virus]
gi|170664599|gb|ACB28756.1| m133R [Myxoma virus]
gi|170664772|gb|ACB28928.1| m133R [recombinant virus 6918VP60-T2]
gi|301134659|gb|ADK63773.1| m133R [Myxoma virus]
gi|408684626|gb|AFU77065.1| m133R [Myxoma virus]
gi|408684794|gb|AFU77232.1| m133R [Myxoma virus]
gi|408684960|gb|AFU77397.1| m133R [Myxoma virus]
gi|408685129|gb|AFU77565.1| m133R [Myxoma virus]
gi|408685299|gb|AFU77734.1| m133R [Myxoma virus]
gi|408685467|gb|AFU77901.1| m133R [Myxoma virus]
gi|408685634|gb|AFU78067.1| m133R [Myxoma virus]
gi|408685802|gb|AFU78234.1| m133R [Myxoma virus]
gi|408685971|gb|AFU78402.1| m133R [Myxoma virus]
gi|408686137|gb|AFU78567.1| m133R [Myxoma virus]
gi|408686306|gb|AFU78735.1| m133R [Myxoma virus]
gi|408686474|gb|AFU78902.1| m133R [Myxoma virus]
gi|408686641|gb|AFU79068.1| m133R [Myxoma virus]
gi|408686809|gb|AFU79235.1| m133R [Myxoma virus]
gi|408686977|gb|AFU79402.1| m133R [Myxoma virus]
gi|408687145|gb|AFU79569.1| m133R [Myxoma virus]
gi|408687313|gb|AFU79736.1| m133R [Myxoma virus]
gi|408687481|gb|AFU79903.1| m133R [Myxoma virus]
gi|408687648|gb|AFU80069.1| m133R [Myxoma virus]
gi|408687816|gb|AFU80236.1| m133R [Myxoma virus]
gi|408687984|gb|AFU80403.1| m133R [Myxoma virus]
gi|408688152|gb|AFU80570.1| m133R [Myxoma virus]
gi|408688321|gb|AFU80738.1| m133R [Myxoma virus]
Length = 563
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 176/350 (50%), Gaps = 32/350 (9%)
Query: 406 EKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGER 465
+KIV +L + S+ S PG P+ PMLA + VS VNK++ + E KYDGER
Sbjct: 192 KKIVYHVLNES----SDDVSTGPGTPVKPMLADICRSVSVAVNKYKRGIYA-EIKYDGER 246
Query: 466 AQIHYLEDGSVEIYSRNAERNT-GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
QIH D E YSRN +R T K + A+S + PS +F+LD E+V D +
Sbjct: 247 VQIHKY-DNIYEFYSRNLKRVTPHKVQGLDDALS-IAFPSANNFILDAELVLVDERTGEC 304
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
LPF +L + + S C++ FD LY N + LL+ RR + +E
Sbjct: 305 LPFGSLGVHKKASFESST----PCLFVFDCLYYNDKSLLRVPFVQRRAFIEAMIKE---- 356
Query: 585 FQFATTLTSIDL----DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKD 640
+ T++ I + +I + L +V+ EGL++K D Y+P R WLK+KKD
Sbjct: 357 IKHKITMSDIRIIRNESDITEALQESVEKGLEGLMLKG--GDDVYKPGLR--GWLKIKKD 412
Query: 641 YIE---SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+++ S+ DS DLV + A++G+G + G+ FL+ CYD + ++++ K +G ++ L
Sbjct: 413 HLKTATSMADSADLVVLGAYYGKGCKGGIMSVFLMGCYDEEKDNWKTVTKC-SGHTDKTL 471
Query: 698 EERSSSLRSKVIPKPRP---YYRFADTISPD-VWFEPTERPETSNSPASI 743
+E S K+ P + T PD V +PT+ P S AS
Sbjct: 472 QELQSMDVIKIGKDPAKIPDWLIVHKTYYPDFVVRDPTKAPVWEISGASF 521
>gi|410980492|ref|XP_003996611.1| PREDICTED: DNA ligase 3 isoform 2 [Felis catus]
Length = 1015
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 192/404 (47%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V D F L + K+ ++++ + A A D + +IRL++ L++ +
Sbjct: 373 LTIQEV-DAFLLCLSKLTKEDEQQQALQDIASRCTANDL--KCIIRLIKHDLKMNSGAKH 429
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E + ++V P + + +L+T
Sbjct: 430 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKEPGRRRALSVQASLMT----- 480
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 481 -----------PVQPMLAEACKSIEHAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 527
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 528 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDTKTGKPLPFGTLGVH-- 581
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 582 KKAAFQD--ANVCLFVFDCIYFNDISLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTK 639
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 640 ASDLADMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 695
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 696 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCSGGHDDATL 739
>gi|195109244|ref|XP_001999197.1| GI24375 [Drosophila mojavensis]
gi|193915791|gb|EDW14658.1| GI24375 [Drosophila mojavensis]
Length = 793
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 204/436 (46%), Gaps = 32/436 (7%)
Query: 272 HVKKQYQEMGDL---GLVAKASRSSQSMMRKPDPLTITKVF--DTFRLIAKEAGKDSQEK 326
HV +Q + DL G +++ R + K P T +K++ + +++ + + +++
Sbjct: 85 HVDQQEMHL-DLEQDGDISETLRKHFATSSKLKPQTQSKLYLHEVEKMLCQLEQRTKEDE 143
Query: 327 KKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQS 386
+ ++ L ATD + + IRL++ LRI + +L A G A P QS
Sbjct: 144 QTEVLQKLCKQATDLDLRTFIRLIKQDLRINARARHILDAFGPQAY---------PAYQS 194
Query: 387 PLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEI 446
+ AA + Q F+ P + +T + PI PMLA K V E
Sbjct: 195 SRDLAA--IVQNFAGKEGTSLKTP-IKATAKKAKKDTSAIQVMTPISPMLANACKSVEEA 251
Query: 447 VNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE-RNTGKFPDVVLAVSRLKKPSV 505
K ++ E KYDGER QIH + + +SRN + K D+ + R P
Sbjct: 252 FKKNPGGLYS-EIKYDGERVQIHK-KGAEFKFFSRNLKPVMDHKIKDLKDYIPR-AFPGA 308
Query: 506 RSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQE 565
+LD EI+ D E +LPF TL + + +C++ FD L +G L Q
Sbjct: 309 GDMILDSEIILVDTETGALLPFGTLGAHKKHTYA----NASICLFVFDCLLYDGDDLTQL 364
Query: 566 QLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATY 625
RRE L + + Q + + +E+ + A+ EG+++K+ +TY
Sbjct: 365 AFCKRREILEQNIQPIKSHVQLSESEFLKTKNELALMTAKVLQANLEGVVLKS--PSSTY 422
Query: 626 EPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQ 683
+P KR NWLK+KKDY+ + D+ DLV + A++G GK+ GV FL+ CYD+ + ++
Sbjct: 423 QPGKR--NWLKVKKDYLFGGKMADTADLVVLGAWYGSGKKGGVLSIFLMGCYDARDHLWK 480
Query: 684 SICKIGTGFSEAMLEE 699
++ K+ +G +A +E
Sbjct: 481 TVTKVHSGLDDATNDE 496
>gi|448361985|ref|ZP_21550598.1| DNA ligase [Natrialba asiatica DSM 12278]
gi|445649665|gb|ELZ02602.1| DNA ligase [Natrialba asiatica DSM 12278]
Length = 569
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 223/505 (44%), Gaps = 61/505 (12%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRT--ESHV 273
+ +R + +DL V ++ PA + L IG + +A+A A G V
Sbjct: 22 IVAHVRDLFADAGDDLPVVARFVQGRVFPAWDSTTLDIGPNTCYEAIARAAGTNVDADDV 81
Query: 274 KKQYQEMGDLGLVAKA--------------SRSSQSMMRKPDPLTITKVFDTFRLIAKEA 319
+++ E G++G VA + + D LT+ +V +T +A
Sbjct: 82 EERLAERGEIGDVAASYDFGGQQGLGAFTGGGGDSTGSSGGDDLTVREVDETLAELAAAE 141
Query: 320 GKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK 379
G SQ++K + + L + E +YL RL+ S++RIG+ E + A+ +A E +
Sbjct: 142 GAGSQDRKVDLLFGLFNRCSSSEARYLARLVLSEMRIGVGEGAVRDAIAEAFDVPEDRVE 201
Query: 380 PPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKP 439
+ + + A++ + + VP L + G P+ MLA+
Sbjct: 202 RALQVSNDYGQVARVAR---------DAGVPGL---------DDIELELGRPVQAMLAQA 243
Query: 440 TKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV-LAVS 498
V++ + ++ E E+KYDG R Q+HY G ++SRN E T P+VV A
Sbjct: 244 GT-VTDAIAEWD--EAGVEWKYDGARIQLHYDPGGETRVFSRNMEEVTDALPEVVEFAAE 300
Query: 499 RLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI--YAFDILY 556
L +P +LD E+VA D E LPFQ + R R+ ++ + DV + FD L+
Sbjct: 301 ALDEP----VILDGEVVAID-EGGSPLPFQEVLKRFRRKHDVAKAREDVPVRPVFFDCLH 355
Query: 557 RNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL-------DEIQKFLDAAVDA 609
G+ LL+ L R E L P Q + + L DEI+ A++A
Sbjct: 356 AGGEDLLEVPLTSRHERLESVLAARPDQNQDPAEVDGLSLLWLTDDPDEIEAVDADALEA 415
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EG+++K ++ Y P +R NW K K D ++LD V A G G+R G
Sbjct: 416 GHEGIMLKNP--ESAYSPGRRGKNWRKRKPDV-----ETLDCVVTGAEWGEGRRATYLGT 468
Query: 670 FLLACYDSNNEEFQSICKIGTGFSE 694
F L+ N ++ +++ K+ TG ++
Sbjct: 469 FELSV--RNGDDLETVGKVATGITD 491
>gi|410980490|ref|XP_003996610.1| PREDICTED: DNA ligase 3 isoform 1 [Felis catus]
Length = 996
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 192/404 (47%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V D F L + K+ ++++ + A A D + +IRL++ L++ +
Sbjct: 373 LTIQEV-DAFLLCLSKLTKEDEQQQALQDIASRCTANDL--KCIIRLIKHDLKMNSGAKH 429
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E + ++V P + + +L+T
Sbjct: 430 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKEPGRRRALSVQASLMT----- 480
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 481 -----------PVQPMLAEACKSIEHAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 527
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 528 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDTKTGKPLPFGTLGVH-- 581
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 582 KKAAFQD--ANVCLFVFDCIYFNDISLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTK 639
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 640 ASDLADMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 695
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 696 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCSGGHDDATL 739
>gi|397779692|ref|YP_006544165.1| DNA ligase 1 [Methanoculleus bourgensis MS2]
gi|396938194|emb|CCJ35449.1| DNA ligase 1 [Methanoculleus bourgensis MS2]
Length = 548
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 140/544 (25%), Positives = 244/544 (44%), Gaps = 60/544 (11%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F+ + + + + +GR+ + + V +L + + E+L V ++ P +LG
Sbjct: 3 FLEFARICEHLEGISGRLDMIEQVSAVLPGLED---EELPIFVRFIMGRVFPDWSPKKLG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAK---ASRSSQSMMRKPDPLTITKVF 309
+G + A+A G S V++ GD GL + A++ S + + + +V+
Sbjct: 60 VGPNLLYDAVAYVVGTKRSAVREAINATGDAGLAIEDLLATKEQTSFFVQE--MDLLEVY 117
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
F +A G SQ +K ++ L A E +YL RL+ +LRIG+ E ++ A+ +
Sbjct: 118 WDFERVAAAEGARSQREKLLVVRKLFANARPLEGRYLARLMLEELRIGMGEGSVRDAVAR 177
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + + + + L E A + ++ PA L+ + P
Sbjct: 178 AFDIDVRLVEHAHQAMNDLGEVALLARR-----------DPAALS--------RVTIEPF 218
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDM-EFTCEYKYDGERAQIHYLEDGSV-EIYSRNAERNT 487
P+ MLA+ I + +D E EYKYDG R Q H + G++ IYSR E T
Sbjct: 219 RPVKMMLAQA----GTIAGQIEDHGEVAVEYKYDGSRFQFHKV--GNICRIYSRRLEEVT 272
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KV 545
G PD+V+ L + + +LD E+VA + + +PFQ + R R+ ++ + K+
Sbjct: 273 GSLPDIVM---HLGEATDHDVILDGEVVAV--QDGRPMPFQYVIRRFRRKHQVNAMMEKI 327
Query: 546 DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDA 605
+V FDILY +G+ L+ L RR L + + A D+ +
Sbjct: 328 EVVPRVFDILYLDGETLMDRPLAERRRILEEVLDA-----HIAPQFLVTDVAGAEAIYTE 382
Query: 606 AVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
A++ EG+++K + Y P R W+K+K ++LDL I A G G+R
Sbjct: 383 ALNLGHEGVMVKV--PSSPYTPGVRGRLWVKVKPGV-----ETLDLAVIGAEWGEGRRAK 435
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
++G+FLLA D + K+ TG ++ +L + + L+ VI + T+ P
Sbjct: 436 MFGSFLLAVQDQGR--LLPVGKVATGITDEVLADLYALLKDSVIARSGKEV----TLEPK 489
Query: 726 VWFE 729
V FE
Sbjct: 490 VVFE 493
>gi|167522421|ref|XP_001745548.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775897|gb|EDQ89519.1| predicted protein [Monosiga brevicollis MX1]
Length = 1132
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 217/486 (44%), Gaps = 42/486 (8%)
Query: 218 NMLRTVME--TTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKK 275
N++RT + T+ + +YL + P H + + ++K + A T
Sbjct: 247 NIIRTFITKGTSGQGFTGDLYLVMRHLLPQHPKRVYNMKEKQLVKIFS-ALFHTSEQDLT 305
Query: 276 QYQEMGDLG-LVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKAL 334
++ E GD+ +A +SQ + +P + + D L+ + + + +++ +
Sbjct: 306 EHLEQGDVSDTMASFFATSQGL--RPAAQSTLSLEDVENLLRQLENRTTIDEQTRVFRQH 363
Query: 335 LVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKI 394
L T + +Y++R ++ LRI + +L+AL A EA K
Sbjct: 364 LPRMTTEDLRYVVRHIKHDLRIFAGSKIILSALNPGAY-----------------EAWKA 406
Query: 395 VKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDME 454
+++++ K P+L D +S S P+ PMLA+ + V K +
Sbjct: 407 SNDLYALVQRCLKHGPSLKRD----VSVRASLM--TPVKPMLAEACRSYEMAVQKCPN-G 459
Query: 455 FTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEI 514
E KYDGER Q+H D + +SR+ + R P + +LD E+
Sbjct: 460 ILAEIKYDGERVQVHKQGD-NFRFFSRSLKEVQDHKISFFRESIRQACPHGHTMILDAEV 518
Query: 515 VAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHL 574
+ D K LPF TL + + C++ FDIL+ NG+ L+ E + RR L
Sbjct: 519 LMVDTTTSKPLPFGTLGVHKKTRFT----NAQPCLFIFDILHFNGRNLMDETMEERRRLL 574
Query: 575 YDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNW 634
++ DL ++ + + + EGL++K DR + YEPSKR +W
Sbjct: 575 TSHVVSVHNEIMYSEQTAIPDLPTLRALMTKVMRENLEGLVLK--DRHSVYEPSKR--HW 630
Query: 635 LKLKKDYIES--IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGF 692
LK+KKDY+ES + D+ DL + A+ G G + G+ +L+ C D +N ++++ K G GF
Sbjct: 631 LKMKKDYLESGAMADTADLALLGAWFGTGSKGGLLSVYLMGCRD-DNGVWRTVTKCGNGF 689
Query: 693 SEAMLE 698
+A ++
Sbjct: 690 DDAQVD 695
>gi|431890909|gb|ELK01788.1| DNA ligase 3 [Pteropus alecto]
Length = 909
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 140/273 (51%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 378 PVQPMLAEACKSIEYAIRKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 435
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 436 VAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKAAFQD--AN 487
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ + ++ ++
Sbjct: 488 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKVSDLVDMINRV 547
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 548 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 603
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 604 GMMSIFLMGCYDPSSQKWCTVTKCSGGHDDATL 636
>gi|348567743|ref|XP_003469658.1| PREDICTED: DNA ligase 3-like isoform 3 [Cavia porcellus]
Length = 951
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 139/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 479 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 536
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 537 VAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKAAFQD--AN 588
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ ++
Sbjct: 589 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASDLADMINRV 648
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 649 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 704
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 705 GMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATL 737
>gi|296477017|tpg|DAA19132.1| TPA: DNA ligase (ATP) 3 [Bos taurus]
Length = 943
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 193/411 (46%), Gaps = 46/411 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 374 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 430
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E + ++V P + + +L+T
Sbjct: 431 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKEPGQRRALSVQASLMT----- 481
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 482 -----------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD-HFSYF 528
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D K LPF TL
Sbjct: 529 SRSLKPVLPHKVAHFKDFIPRAF----PGGHSMILDSEVLLIDNRTGKPLPFGTLGVH-- 582
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 583 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKLLHDNMVEIPNRIMFSEMKQVTK 640
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 641 ASDLVDMINRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 696
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ AF+G+G + G+ FL+ CYD +++++ ++ K G +A L + L
Sbjct: 697 LGAFYGQGSKGGMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATLARLQTEL 747
>gi|281341925|gb|EFB17509.1| hypothetical protein PANDA_012829 [Ailuropoda melanoleuca]
Length = 1015
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 139/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 481 PVQPMLAEACKSIEHAMKKCPNGMFS-EIKYDGERVQVHKNGD-RFNYFSRSLKPVLPHK 538
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 539 VAHFKDYIPQAF----PGGHSMILDSEVLLIDTKTGKPLPFGTLGVH--KKAAFQD--AN 590
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ ++
Sbjct: 591 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKAADLADMINRV 650
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 651 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 706
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 707 GMMSIFLMGCYDPDSQKWCTVTKCSGGHDDATL 739
>gi|159906067|ref|YP_001549729.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus maripaludis C6]
gi|224487890|sp|A9AAX4.1|DNLI_METM6 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|159887560|gb|ABX02497.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus maripaludis C6]
Length = 573
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 246/529 (46%), Gaps = 60/529 (11%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMET-TPEDLVPVVYLAANKIAPAHEGLEL 251
FI + D I T R+ TD ++ + E+L V + ++ E E+
Sbjct: 3 FIDFCKILDKIEKTTKRLEKTDYFVELIDFIKNNGKAENLKQVSQITIGRVFAEFENKEI 62
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGL-VAKASRSSQSMMRKPDPLTITKVFD 310
GIG +I+A+ + G +E +K + ++ GD+G+ V S + + + PLT+ +++
Sbjct: 63 GIGPNLLIEAV-KTTGISEKDLKAEIKKTGDIGIAVENLSSNIKQVSLFSQPLTLEEIYS 121
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
T + +++ G SQ+KK I LL+ + E +Y+ RL+ +RIG+ T+LA+
Sbjct: 122 TLKKLSEIEGNSSQKKKTRIISNLLILSNPVESRYISRLILEDMRIGMNIPTILASFSNY 181
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
N++ V+++++V I L++ ++ N +
Sbjct: 182 FNVNKEA-----------------VEKIYAVTNDIGLIGKKLISGS--DIENDSELKLKV 222
Query: 431 --PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
PI PMLA+ T + + + + + +F E KYDG R Q+H +G V IYSR E T
Sbjct: 223 FRPIKPMLAQLTPSIEDAIIETKMPQF--ETKYDGARVQVHK-SNGKVNIYSRRLENITN 279
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVD 546
P++ V + K + + +L+ E VA D K PFQ + R R+ + + K+
Sbjct: 280 SVPEL---VEEINKIDIDNIILEGECVAMDLSSGKPRPFQDILRRFRRKYDIDKVAEKIA 336
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHL--------YDS---------FEEEPGFFQFAT 589
+ IY FD+LY + L+ L+ RRE L +DS F + F F
Sbjct: 337 LRIYFFDVLYYE-KGLIDTPLKNRREILEKLFGTNNWDSELEKIQKEIFSNKMLFSSFK- 394
Query: 590 TLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSL 649
L S D D ++F + ++ EG++IK + DA Y P R K+K ++L
Sbjct: 395 -LNSDDPDLAKEFFNWSLSIGHEGIMIK--NPDAPYTPGSRVKTMYKVKPTL-----ENL 446
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
D+V A G GKR YG++ ++ D + + I +G+G +E LE
Sbjct: 447 DVVVTRAKIGMGKRKDWYGSYEISVKD-DEDNLHVIGNVGSGLTEDDLE 494
>gi|323453870|gb|EGB09741.1| hypothetical protein AURANDRAFT_53245 [Aureococcus anophagefferens]
Length = 400
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 138/253 (54%), Gaps = 19/253 (7%)
Query: 458 EYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY 517
E+KYDG+RAQ+H DG++ I+SR + T K+PDV A ++FV+D EIV
Sbjct: 29 EHKYDGQRAQLHG-SDGALRIFSRKNDDMTDKYPDVARAAR---AACAQTFVVDAEIVPV 84
Query: 518 DREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDS 577
L FQ L R R V+ ++++ V + FD+L+ + L RR L +
Sbjct: 85 SAAANP-LAFQALGARKRVGVTEANVEQAVRLVLFDLLWLGDADVTALPLSERRAKLRAA 143
Query: 578 FEEEPGFFQFATTLTSIDL--------DEIQKFLDAAVDASCEGLIIKTMDRDATYE--- 626
F E +A + T +DL + + L +VDA CEGL++K +D A YE
Sbjct: 144 FGEPSAAVAYAAS-TDVDLAADDAPLEEAVTAALLESVDAGCEGLMLKRLD--APYEYSL 200
Query: 627 PSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSIC 686
SKRS W+KLKKDY++++GDSLDLV I + G+G+++ L+A D E S+C
Sbjct: 201 GSKRSDAWVKLKKDYVDALGDSLDLVVIGGWQGQGRKSKWVSPILVATRDPETEALGSVC 260
Query: 687 KIGTGFSEAMLEE 699
++ +GF++ ++
Sbjct: 261 RVMSGFTDVFYKD 273
>gi|301776466|ref|XP_002923661.1| PREDICTED: DNA ligase 3-like [Ailuropoda melanoleuca]
Length = 996
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 139/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 481 PVQPMLAEACKSIEHAMKKCPNGMFS-EIKYDGERVQVHKNGD-RFNYFSRSLKPVLPHK 538
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 539 VAHFKDYIPQAF----PGGHSMILDSEVLLIDTKTGKPLPFGTLGVH--KKAAFQD--AN 590
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ ++
Sbjct: 591 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKAADLADMINRV 650
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 651 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 706
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 707 GMMSIFLMGCYDPDSQKWCTVTKCSGGHDDATL 739
>gi|290972643|ref|XP_002669061.1| ATP dependent DNA ligase [Naegleria gruberi]
gi|284082602|gb|EFC36317.1| ATP dependent DNA ligase [Naegleria gruberi]
Length = 915
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 148/285 (51%), Gaps = 16/285 (5%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY-LEDGSVEIYSRN-AERNTG 488
P+ PMLA+P+K +++ + + F E KYDGER QIHY ++ ++ +SRN +
Sbjct: 6 PVKPMLARPSKTYDDVIARCPN-GFYSELKYDGERIQIHYDRKNDEIKYFSRNLKDVQEY 64
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVC 548
K V +S+ K V S +LD EI+ D + KILPF TL KNV
Sbjct: 65 KIKSVKKYISKAIKEKVESVILDGEILMMDTKTNKILPFGTLG----KNVRQDHKDAVTT 120
Query: 549 IYAFDILYRNGQPLLQEQLRVRR---EHLYDSFEEEPGFFQFATTLTSIDLDE--IQKFL 603
I+ FDILY NG+ LL L R+ + + + ++ S E + +
Sbjct: 121 IFLFDILYYNGKSLLSVPLYKRKALMTKIVNPIKHRVMLGEYLVVKGSKQTREAIVSAEM 180
Query: 604 DAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
A + EGL++K D + YEP+ R +WLK+KKDY++ + DS+DLV + A+ G G +
Sbjct: 181 SAMIKKGEEGLVLK--DLCSPYEPNAR--HWLKMKKDYLKGMADSVDLVVLGAYLGTGSK 236
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
G+ F++ +D +++ ICK G G + +E + L+S +
Sbjct: 237 GGLMSVFMMGSFDKKLGKWRIICKCGNGHDDQTIETLNEELKSNM 281
>gi|18029884|gb|AAL56553.1|AF393655_1 DNA ligase III isoform beta [Xenopus laevis]
Length = 906
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 189/416 (45%), Gaps = 45/416 (10%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V D L+ + + +E ++N ++ + T + + +IRL++ LR+ +
Sbjct: 337 LTIHEVDD---LLTRLSKMTKEEDQQNVLEDIARRCTSNDLKCIIRLVKHDLRMNSGAKR 393
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL PN + + + V VL E+ P + LS
Sbjct: 394 VLDALD-------------PNAYDAFKASRNLGDVVERVLR-NEQQAPGMKR----TLSV 435
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSR 481
S P+ PMLA+ K + + K + + E KYDGER Q+H +DG +SR
Sbjct: 436 QASLM--TPVQPMLAEACKSIEYAMKKCPNGMYA-EIKYDGERVQVH--KDGDHFSYFSR 490
Query: 482 NAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
+ + F D + P S +LD E++ D K LPF TL K
Sbjct: 491 SLKPVLPHKVAHFKDFIPKAF----PGGNSMILDAEVLLIDTNYGKPLPFGTLGVH--KK 544
Query: 538 VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD 597
+ D VC++ FD +Y NG L+ L RR+ + ++ E P F+ I
Sbjct: 545 AAFKD--ASVCLFVFDCIYFNGVSLMDRPLNERRKFMRENMVEIPNHIMFSEMKHVIKAA 602
Query: 598 EIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIA 655
++ + + EGL++K D + YEP KR +WLK+KKDY+ ++ D+ DL +
Sbjct: 603 DLADMITRVIREGLEGLVLK--DIKSNYEPGKR--HWLKVKKDYLNEGAMADTADLAVLG 658
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
A++G+G G+ FL+ CYD + + ++ K +G+ +A L+ L I K
Sbjct: 659 AYYGKGANGGIMSIFLMGCYDPEGQHWCTVTKCSSGYDDATLQRLQKELNMVKISK 714
>gi|440902828|gb|ELR53569.1| DNA ligase 3 [Bos grunniens mutus]
Length = 1002
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 193/411 (46%), Gaps = 46/411 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 374 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 430
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E + ++V P + + +L+T
Sbjct: 431 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKEPGQRRALSVQASLMT----- 481
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 482 -----------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD-HFSYF 528
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D K LPF TL
Sbjct: 529 SRSLKPVLPHKVAHFKDFIPRAF----PGGHSMILDSEVLLIDNRTGKPLPFGTLGVH-- 582
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 583 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKLLHDNMVEIPNRIMFSEMKQVTK 640
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 641 ASDLVDMINRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 696
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ AF+G+G + G+ FL+ CYD +++++ ++ K G +A L + L
Sbjct: 697 LGAFYGQGSKGGMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATLARLQTEL 747
>gi|40555999|ref|NP_955084.1| CNPV061 DNA ligase [Canarypox virus]
gi|40233824|gb|AAR83407.1| CNPV061 DNA ligase [Canarypox virus]
Length = 565
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 211/482 (43%), Gaps = 62/482 (12%)
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKAS-RSS 293
VY+ + P L + D IIK ++ + K + GD+ V + + S
Sbjct: 45 VYIIVKLLLPGVSKLIYNVNDKQIIKFFSKILKFEVEEINKYVVDTGDVAYVIGSFLKKS 104
Query: 294 QSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSK 353
S+ + D F + K+ + K+ K ++ T + +Y+IRL++
Sbjct: 105 TSVYYATQSTLKLQDIDCFLTRLSKVTKEHDQIKE--FKKIIPKCTPNDLRYIIRLVKHD 162
Query: 354 LRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL 413
LR+ + + +LAAL + A +F + E +V L
Sbjct: 163 LRMNIGPKHVLAALHEKAY------------------------DIFKLSNDLEYVVNKSL 198
Query: 414 TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLED 473
NL P IPI PMLA K SE K + E+KYDGER Q+H +D
Sbjct: 199 EG---NLKPVVK--PMIPIHPMLASICKTFSEAKEKCKG-GIIVEFKYDGERIQVH--KD 250
Query: 474 G-SVEIYSRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQ 528
G + + +SR+ + F ++++ PS + +LD EI+ D+E K LPF
Sbjct: 251 GDNFKFFSRSLKPVTPHKISSFEELLVQAF----PSANNMILDGEIILVDKETNKPLPFG 306
Query: 529 TLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFA 588
TL + + +C + FD LY N L+ + L RR D
Sbjct: 307 TLGINKKAMYN----NACICFFIFDCLYFNDISLIDKPLSYRR----DIISSNIIEISNR 358
Query: 589 TTLTSIDL----DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE- 643
L+ + L E+ + L + EG ++K D YEP R WLK+KKDY++
Sbjct: 359 VLLSEVRLIEEDKELIRLLKIVLSKGIEGFVLK--DEKGVYEPGMR--RWLKIKKDYLDN 414
Query: 644 -SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSS 702
S+ D DL+ + A++G+G ++G+ +FL+ CYD ++++ ++ K G S++ L+E
Sbjct: 415 GSMADKADLLVLGAYYGKGNKSGLLSSFLMGCYDEESKKWCTVTKCSGGHSDSELKEIQK 474
Query: 703 SL 704
S+
Sbjct: 475 SI 476
>gi|351702200|gb|EHB05119.1| DNA ligase 3 [Heterocephalus glaber]
Length = 1013
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 138/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 481 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 538
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 539 VAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKAAFQD--AN 590
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ ++
Sbjct: 591 VCLFVFDCVYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASDLADMINQV 650
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 651 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 706
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 707 GMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 739
>gi|282165841|ref|NP_001016351.2| DNA ligase (ATP) 3 [Xenopus (Silurana) tropicalis]
gi|195539958|gb|AAI67946.1| Unknown (protein for MGC:136050) [Xenopus (Silurana) tropicalis]
Length = 893
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 189/415 (45%), Gaps = 43/415 (10%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V D L+ K + +E ++N ++ + T + + +IRL++ L++ +
Sbjct: 336 LTIHEVDD---LLTKLSKMTKEEDQQNVLEDIAHRCTSNDLKCIIRLIKHDLKMNSGAKH 392
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL PN + + + V VL E+ P + LS
Sbjct: 393 VLDALD-------------PNAYDAFKASRNLGDVVERVLR-NEQQAPGMKR----TLSV 434
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
S P+ PMLA+ K + + K + + E KYDGER Q+H D +SR+
Sbjct: 435 QASLM--TPVQPMLAEACKSIEYAMKKCPNGMYA-EIKYDGERVQVHKNGD-HFSYFSRS 490
Query: 483 AE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+ F D + P S +LD E++ D K LPF TL K
Sbjct: 491 LKPVLPHKVAHFKDFIPKAF----PGGNSMILDAEVLLIDTNTGKPLPFGTLGVH--KKA 544
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
+ D +VC++ FD +Y NG L+ L RR+ + D+ E P F+ +
Sbjct: 545 AFKD--ANVCLFVFDCIYFNGVSLMDRPLSERRKFMRDNMVEIPNHILFSEMKHVTKASD 602
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAA 656
+ + + EGL++K D + YEP KR +WLK+KKDY+ ++ D+ DL + A
Sbjct: 603 LADMITRVIREGLEGLVLK--DLKSNYEPGKR--HWLKVKKDYLNEGAMADTADLAVLGA 658
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
++G+G G+ FL+ CYD ++++ ++ K +G+ +A L+ L I K
Sbjct: 659 YYGKGANGGIMSIFLMGCYDPESQKWCTVTKCSSGYDDATLQRLQKELNMVKISK 713
>gi|291405585|ref|XP_002719279.1| PREDICTED: DNA ligase (ATP) 3 isoform 3 [Oryctolagus cuniculus]
Length = 952
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 194/407 (47%), Gaps = 52/407 (12%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC---EPQYLIRLLQSKLRIGLA 359
LTI +V + ++K +D Q++ AL A+ C + + +IRL++ L++
Sbjct: 374 LTIQEVDEFLLRLSKLTKEDEQQQ------ALQDIASRCTANDLKCIIRLIKHDLKMNSG 427
Query: 360 EQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDG 416
+ +L AL A + S+ N+Q +E + ++V P ++ + +L+T
Sbjct: 428 AKHVLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKEPGCKRALSVQASLMT-- 481
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
P+ PMLA+ K + + K + F+ E KYDGER Q+H D
Sbjct: 482 --------------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HF 525
Query: 477 EIYSRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLST 532
+SR+ + F D + P S +LD E++ D K LPF TL
Sbjct: 526 SYFSRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNNTGKPLPFGTLGV 581
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 582 H--KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKLLHDNMVEIPNRIMFSEMKR 637
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLD 650
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ D
Sbjct: 638 VTKASDLADMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTAD 693
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
LV + AF+G+G + G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 694 LVVLGAFYGQGSKGGMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATL 740
>gi|348567741|ref|XP_003469657.1| PREDICTED: DNA ligase 3-like isoform 2 [Cavia porcellus]
Length = 939
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 139/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 479 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 536
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 537 VAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKAAFQD--AN 588
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ ++
Sbjct: 589 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASDLADMINRV 648
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 649 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 704
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 705 GMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATL 737
>gi|348567739|ref|XP_003469656.1| PREDICTED: DNA ligase 3-like isoform 1 [Cavia porcellus]
Length = 1010
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 139/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 479 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 536
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 537 VAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKAAFQD--AN 588
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ ++
Sbjct: 589 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASDLADMINRV 648
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 649 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 704
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 705 GMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATL 737
>gi|448591214|ref|ZP_21650893.1| DNA ligase (ATP) [Haloferax elongans ATCC BAA-1513]
gi|445733770|gb|ELZ85335.1| DNA ligase (ATP) [Haloferax elongans ATCC BAA-1513]
Length = 585
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 148/537 (27%), Positives = 235/537 (43%), Gaps = 44/537 (8%)
Query: 216 VCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHV 273
+ + L + +DL V ++ PA + L IG +A+A A G + V
Sbjct: 22 IVSYLADLFRDADDDLATVARFVQGRVFPAWDSTTLDIGPRLCHEAIARAAGPNVSADDV 81
Query: 274 KKQYQEMGDLGLVAK-----ASRSSQSM-MRKPDPLTITKVFDTFRLIAKEAGKDSQEKK 327
+ + E G++G VA R + D LT+ +V R +A +G S++ K
Sbjct: 82 EDRLAEQGEIGAVAASYDFGGQRGLAAFGAGGQDGLTVAEVDSELRALAAASGAGSEDTK 141
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKP------- 380
+ L E ++L RL+ S++RIG+ E ++ A+ +A + + +
Sbjct: 142 LKTLYGLFNRTDPDEARFLARLVLSEMRIGVGEGSVRDAIAEAFLVADADATAIRDDDAD 201
Query: 381 ---PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLA 437
+ +E V + V Y + +G L + G PI MLA
Sbjct: 202 TDTEAAARERRDENIATVARALQVSNDYGMVAEVARDEGKAGLDD-VHLEVGRPIQAMLA 260
Query: 438 KPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAV 497
+ ++ +++++ E K+DG R Q+H E G V +YSRN E TG P+VV V
Sbjct: 261 QAGT-AADALDEWETA--AIETKFDGARVQVHRDESGEVSLYSRNMEDVTGALPEVVEFV 317
Query: 498 SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCIYAFDIL 555
V +LD E+VA D + LPFQ + R R+ + ++ V V + AFD L
Sbjct: 318 EDAVDCPV---ILDGEVVAMD-DAGDPLPFQEILRRFRRKHDVDQMREEVRVELRAFDCL 373
Query: 556 YRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLI 615
+ +G LL L R + L ++ DEI + A+DA EG++
Sbjct: 374 HADGDDLLNAPLTTRHDRLATVLGQDSKAVSDLLLSDDS--DEIAGYEADALDAGHEGIM 431
Query: 616 IKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY 675
+K DA Y P R NWLK K D ++LDLV A G G+R G FLL+
Sbjct: 432 LKNP--DAAYSPGDRGKNWLKRKPDV-----ETLDLVVTGAEWGEGRRAKFLGTFLLSAR 484
Query: 676 ---DSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
S ++EF++I K+ TG ++ L E + L ++ R + D I P V FE
Sbjct: 485 VEDASGDDEFETIGKVATGITDEQLVELTDLLEPEI---ERESGKEVD-IRPSVVFE 537
>gi|291405581|ref|XP_002719277.1| PREDICTED: DNA ligase (ATP) 3 isoform 1 [Oryctolagus cuniculus]
Length = 1012
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 192/404 (47%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 375 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 431
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E + ++V P ++ + +L+T
Sbjct: 432 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKEPGCKRALSVQASLMT----- 482
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 483 -----------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 529
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D K LPF TL
Sbjct: 530 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNNTGKPLPFGTLGVH-- 583
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 584 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKLLHDNMVEIPNRIMFSEMKRVTK 641
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 642 ASDLADMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 697
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 698 LGAFYGQGSKGGMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATL 741
>gi|291405583|ref|XP_002719278.1| PREDICTED: DNA ligase (ATP) 3 isoform 2 [Oryctolagus cuniculus]
Length = 1011
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 192/404 (47%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 374 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 430
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E + ++V P ++ + +L+T
Sbjct: 431 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKEPGCKRALSVQASLMT----- 481
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 482 -----------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 528
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D K LPF TL
Sbjct: 529 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNNTGKPLPFGTLGVH-- 582
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 583 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKLLHDNMVEIPNRIMFSEMKRVTK 640
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 641 ASDLADMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 696
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 697 LGAFYGQGSKGGMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATL 740
>gi|346644723|ref|NP_001231032.1| DNA ligase 3 [Sus scrofa]
Length = 995
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 194/411 (47%), Gaps = 46/411 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E + ++V P + + +L+T
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKEPGQRRALSVQASLMT----- 479
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 480 -----------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD-HFSYF 526
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 527 SRSLKPVLPHKVAHFKDFIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH-- 580
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 581 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCGRRKFLHDNMVEIPNRIMFSEMKQVSK 638
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 639 ASDLVDMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 694
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ AF+G+G + G+ FL+ CYD +++++ ++ K G +A L + L
Sbjct: 695 LGAFYGQGSKGGMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATLARLQTEL 745
>gi|338711026|ref|XP_001501551.3| PREDICTED: DNA ligase 3 [Equus caballus]
Length = 965
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 192/404 (47%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 383 LTIQEVDEFLLQLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 439
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E + ++V P + + +L+T
Sbjct: 440 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKEPGQRRALSVQASLMT----- 490
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 491 -----------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 537
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 538 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH-- 591
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 592 KKAAFQD--ANVCLFVFDCIYFNEVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTK 649
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 650 AADLADMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 705
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 706 LGAFYGQGSKGGMMSIFLMGCYDPSSQKWCTVTKCSGGHDDATL 749
>gi|395849244|ref|XP_003797241.1| PREDICTED: DNA ligase 3 [Otolemur garnettii]
Length = 1008
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 140/273 (51%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 480 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 537
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 538 VAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKAAFQD--AN 589
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ ++
Sbjct: 590 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMIEIPNRIMFSEMKQVTKASDLVDMINRV 649
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D +TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 650 IREGLEGLVLK--DVKSTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGNKG 705
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 706 GMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATL 738
>gi|345805757|ref|XP_548265.3| PREDICTED: DNA ligase 3 [Canis lupus familiaris]
Length = 1001
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 138/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 481 PVQPMLAEACKSIEHAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 538
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 539 VAHFKDYIPQAF----PGGHSMILDSEVLLIDTKTGKPLPFGTLGVH--KKAAFQD--AN 590
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ ++
Sbjct: 591 VCLFVFDCIYFNDVSLMDRPLSERRKFLHDNMVEIPNRIMFSEMKQVTKASDLVDMINRV 650
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D DLV + AF+G+G +
Sbjct: 651 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADMADLVVLGAFYGQGSKG 706
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 707 GMMSIFLMGCYDPSSQKWCTVTKCSGGHDDATL 739
>gi|195329554|ref|XP_002031475.1| GM26013 [Drosophila sechellia]
gi|194120418|gb|EDW42461.1| GM26013 [Drosophila sechellia]
Length = 783
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 213/464 (45%), Gaps = 43/464 (9%)
Query: 242 IAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD 301
+ PA + + ++IK + + + ++ GD V++ R + +K
Sbjct: 60 LIPAANQRVYNLQNKALIKLFSRIFNADQQQMHLDLEQDGD---VSETLRKHFAASKKLK 116
Query: 302 PLTITKVF--DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLA 359
P +K++ + ++ K + ++++ + ++ L ATD + + IRL++ LRI
Sbjct: 117 PQAQSKLYLQEVEEMLLKLVERTKEDEQTDLLQKLCSKATDLDLRTFIRLVKHDLRINAR 176
Query: 360 EQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWN 419
+ +L A G A P QS + A IV Q F+ + A+ N
Sbjct: 177 ARHILDAFGPDAY---------PTYQSSRDLVA-IVGQ-FAGKENKKDASSAVRKAKKTN 225
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
S T PI PMLA P K V E K ++ E KYDGER QIH + + +
Sbjct: 226 SSGIQVMT---PISPMLASPCKSVEEAFKKSPTGLYS-EIKYDGERVQIHK-QGNDFKFF 280
Query: 480 SRNAERNTGKFPDVVLAVSRLKK------PSVRSFVLDCEIVAYDREKQKILPFQTLSTR 533
SRN + P V + LKK P +LD EI+ D + +LPF +L
Sbjct: 281 SRNLK------PVVDHKIRDLKKYIPQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAH 334
Query: 534 ARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTS 593
++ + VC++ FD + +G+ L Q R RR+ L + + Q + +
Sbjct: 335 KKQTFA----NAAVCLFVFDCILYDGEDLTQLPFRKRRKILEQNIQPIRSHVQLSESEFL 390
Query: 594 IDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDL 651
E+ + A+ EG+++K+ +TY+P KR NWLK+KKDY+ + D+ DL
Sbjct: 391 KTTRELATMTARVLHANLEGVVLKS--PTSTYQPGKR--NWLKVKKDYLFDGKMADTADL 446
Query: 652 VPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEA 695
V + A++G GK+ G FL+ CYD+ ++++ K+ +G +A
Sbjct: 447 VVLGAWYGSGKKGGTLSIFLMGCYDAFGRLWKTVTKVHSGLDDA 490
>gi|355753913|gb|EHH57878.1| DNA ligase 3 [Macaca fascicularis]
Length = 1009
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 139/280 (49%), Gaps = 20/280 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 480 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 537
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 538 VAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKAAFQD--AN 589
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ +
Sbjct: 590 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKASDLADMITRV 649
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 650 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 705
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
G+ FL+ CYD ++++ ++ K G +A L + L
Sbjct: 706 GMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNEL 745
>gi|326435431|gb|EGD81001.1| ligase III [Salpingoeca sp. ATCC 50818]
Length = 1246
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 142/274 (51%), Gaps = 21/274 (7%)
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN----AERNT 487
+ PMLA+ + +K + + E KYDGER Q+H D E +SR+ ++
Sbjct: 548 VKPMLAEACRTYERAFSKCPNGIYA-EIKYDGERVQVHKRGD-RFEFFSRSLKPVSDHKI 605
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV 547
F D V P + +LD E++ D K LPF TL +K +
Sbjct: 606 TFFKDSVKQAC----PHGDTMILDAEVLMVDTSTGKPLPFGTLGIHKKKAFKTAR----P 657
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
C++ FDIL+ NGQ L+ + LR RRE L + E ++ +E+ + +
Sbjct: 658 CLFIFDILHFNGQSLMNKTLRERREFLESNVVEVEHEIMYSEKYHIKSQEELAGLMKRVM 717
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES--IGDSLDLVPIAAFHGRGKRTG 665
EGL++K DR +TY+P KR WLK+KKDY+++ + D+ DLV + A++G G + G
Sbjct: 718 SEGLEGLVLK--DRHSTYQPGKR--RWLKVKKDYLQAGALADTADLVVLGAYYGTGTKGG 773
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEE 699
+ FL+ C DS +++++CK+G G ++A LE+
Sbjct: 774 IMSVFLMGCQDSKG-KWRTVCKVGNGHTDAALEK 806
>gi|426348731|ref|XP_004041981.1| PREDICTED: DNA ligase 3 isoform 2 [Gorilla gorilla gorilla]
Length = 949
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 189/404 (46%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E ++V P + + +L+T
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRALSVQASLMT----- 479
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K V + K + F+ E KYDGER Q+H D +
Sbjct: 480 -----------PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 526
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 527 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH-- 580
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 581 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTK 638
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 639 ALDLADMITRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 694
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 695 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 738
>gi|402899337|ref|XP_003912656.1| PREDICTED: DNA ligase 3 [Papio anubis]
Length = 1009
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 139/280 (49%), Gaps = 20/280 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 480 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 537
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 538 VAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKAAFQD--AN 589
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ +
Sbjct: 590 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKASDLADMITRV 649
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 650 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 705
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
G+ FL+ CYD ++++ ++ K G +A L + L
Sbjct: 706 GMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNEL 745
>gi|441677235|ref|XP_003278419.2| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3 [Nomascus leucogenys]
Length = 1007
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 189/404 (46%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 370 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 426
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E ++V P + + +L+T
Sbjct: 427 VLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRALSVQASLMT----- 477
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 478 -----------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 524
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 525 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH-- 578
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 579 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTK 636
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 637 ASDLADMITRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 692
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 693 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 736
>gi|84000185|ref|NP_001033196.1| DNA ligase 3 [Bos taurus]
gi|83406113|gb|AAI11208.1| Ligase III, DNA, ATP-dependent [Bos taurus]
Length = 943
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 192/411 (46%), Gaps = 46/411 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 374 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 430
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E + ++V P + + +L+T
Sbjct: 431 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKEPGQRRALSVQASLMT----- 481
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 482 -----------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD-HFSYF 528
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D K LPF TL
Sbjct: 529 SRSLKPVLPHKVAHFKDFIPRAF----PGGHSMILDSEVLLVDNRTGKPLPFGTLGVH-- 582
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC + FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 583 KKAAFQD--ANVCQFVFDCIYFNDVSLMDRPLCERRKLLHDNMVEIPNRIMFSEMKQVTK 640
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 641 ASDLVDMINRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 696
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ AF+G+G + G+ FL+ CYD +++++ ++ K G +A L + L
Sbjct: 697 LGAFYGQGSKGGMMSIFLMGCYDPSSQKWCTVTKCAGGHDDATLARLQTEL 747
>gi|410259056|gb|JAA17494.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 949
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 189/404 (46%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E ++V P + + +L+T
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRALSVQASLMT----- 479
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K V + K + F+ E KYDGER Q+H D +
Sbjct: 480 -----------PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 526
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 527 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH-- 580
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 581 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTK 638
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 639 ALDLADMITRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 694
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 695 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 738
>gi|73747844|ref|NP_002302.2| DNA ligase 3 isoform beta precursor [Homo sapiens]
gi|119600603|gb|EAW80197.1| ligase III, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|311346379|gb|ADP89975.1| DNA ligase 3 [Homo sapiens]
gi|311346382|gb|ADP89977.1| DNA ligase 3 [Homo sapiens]
gi|311346385|gb|ADP89979.1| DNA ligase 3 [Homo sapiens]
gi|311346388|gb|ADP89981.1| DNA ligase 3 [Homo sapiens]
gi|311346391|gb|ADP89983.1| DNA ligase 3 [Homo sapiens]
gi|311346394|gb|ADP89985.1| DNA ligase 3 [Homo sapiens]
gi|311346397|gb|ADP89987.1| DNA ligase 3 [Homo sapiens]
gi|311346400|gb|ADP89989.1| DNA ligase 3 [Homo sapiens]
gi|311346403|gb|ADP89991.1| DNA ligase 3 [Homo sapiens]
gi|311346406|gb|ADP89993.1| DNA ligase 3 [Homo sapiens]
gi|311346409|gb|ADP89995.1| DNA ligase 3 [Homo sapiens]
gi|311346412|gb|ADP89997.1| DNA ligase 3 [Homo sapiens]
gi|311346415|gb|ADP89999.1| DNA ligase 3 [Homo sapiens]
gi|311346418|gb|ADP90001.1| DNA ligase 3 [Homo sapiens]
gi|311346421|gb|ADP90003.1| DNA ligase 3 [Homo sapiens]
gi|311346424|gb|ADP90005.1| DNA ligase 3 [Homo sapiens]
gi|311346427|gb|ADP90007.1| DNA ligase 3 [Homo sapiens]
gi|311346430|gb|ADP90009.1| DNA ligase 3 [Homo sapiens]
gi|311346433|gb|ADP90011.1| DNA ligase 3 [Homo sapiens]
gi|311346436|gb|ADP90013.1| DNA ligase 3 [Homo sapiens]
gi|311346439|gb|ADP90015.1| DNA ligase 3 [Homo sapiens]
gi|311346442|gb|ADP90017.1| DNA ligase 3 [Homo sapiens]
gi|311346445|gb|ADP90019.1| DNA ligase 3 [Homo sapiens]
gi|311346448|gb|ADP90021.1| DNA ligase 3 [Homo sapiens]
gi|311346451|gb|ADP90023.1| DNA ligase 3 [Homo sapiens]
gi|311346454|gb|ADP90025.1| DNA ligase 3 [Homo sapiens]
gi|311346457|gb|ADP90027.1| DNA ligase 3 [Homo sapiens]
gi|311346460|gb|ADP90029.1| DNA ligase 3 [Homo sapiens]
gi|311346463|gb|ADP90031.1| DNA ligase 3 [Homo sapiens]
gi|311346466|gb|ADP90033.1| DNA ligase 3 [Homo sapiens]
gi|311346469|gb|ADP90035.1| DNA ligase 3 [Homo sapiens]
gi|311346472|gb|ADP90037.1| DNA ligase 3 [Homo sapiens]
gi|311346475|gb|ADP90039.1| DNA ligase 3 [Homo sapiens]
gi|311346478|gb|ADP90041.1| DNA ligase 3 [Homo sapiens]
gi|311346481|gb|ADP90043.1| DNA ligase 3 [Homo sapiens]
gi|311346484|gb|ADP90045.1| DNA ligase 3 [Homo sapiens]
gi|311346487|gb|ADP90047.1| DNA ligase 3 [Homo sapiens]
gi|311346490|gb|ADP90049.1| DNA ligase 3 [Homo sapiens]
gi|311346493|gb|ADP90051.1| DNA ligase 3 [Homo sapiens]
gi|311346496|gb|ADP90053.1| DNA ligase 3 [Homo sapiens]
Length = 949
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 191/411 (46%), Gaps = 46/411 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E ++V P + + +L+T
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRALSVQASLMT----- 479
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K V + K + F+ E KYDGER Q+H D +
Sbjct: 480 -----------PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 526
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 527 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH-- 580
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 581 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTK 638
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 639 ALDLADMITRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 694
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L + L
Sbjct: 695 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNEL 745
>gi|332848016|ref|XP_003315567.1| PREDICTED: DNA ligase 3 isoform 1 [Pan troglodytes]
Length = 949
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 189/404 (46%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E ++V P + + +L+T
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRALSVQASLMT----- 479
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K V + K + F+ E KYDGER Q+H D +
Sbjct: 480 -----------PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 526
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 527 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH-- 580
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 581 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTK 638
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 639 ALDLADMITRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 694
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 695 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 738
>gi|73747829|ref|NP_039269.2| DNA ligase 3 isoform alpha precursor [Homo sapiens]
gi|251757259|sp|P49916.2|DNLI3_HUMAN RecName: Full=DNA ligase 3; AltName: Full=DNA ligase III; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 3
gi|45751619|gb|AAH68005.1| Ligase III, DNA, ATP-dependent [Homo sapiens]
gi|119600605|gb|EAW80199.1| ligase III, DNA, ATP-dependent, isoform CRA_c [Homo sapiens]
gi|311346378|gb|ADP89974.1| DNA ligase 3 [Homo sapiens]
gi|311346381|gb|ADP89976.1| DNA ligase 3 [Homo sapiens]
gi|311346384|gb|ADP89978.1| DNA ligase 3 [Homo sapiens]
gi|311346387|gb|ADP89980.1| DNA ligase 3 [Homo sapiens]
gi|311346390|gb|ADP89982.1| DNA ligase 3 [Homo sapiens]
gi|311346393|gb|ADP89984.1| DNA ligase 3 [Homo sapiens]
gi|311346396|gb|ADP89986.1| DNA ligase 3 [Homo sapiens]
gi|311346399|gb|ADP89988.1| DNA ligase 3 [Homo sapiens]
gi|311346402|gb|ADP89990.1| DNA ligase 3 [Homo sapiens]
gi|311346405|gb|ADP89992.1| DNA ligase 3 [Homo sapiens]
gi|311346408|gb|ADP89994.1| DNA ligase 3 [Homo sapiens]
gi|311346411|gb|ADP89996.1| DNA ligase 3 [Homo sapiens]
gi|311346414|gb|ADP89998.1| DNA ligase 3 [Homo sapiens]
gi|311346417|gb|ADP90000.1| DNA ligase 3 [Homo sapiens]
gi|311346420|gb|ADP90002.1| DNA ligase 3 [Homo sapiens]
gi|311346423|gb|ADP90004.1| DNA ligase 3 [Homo sapiens]
gi|311346426|gb|ADP90006.1| DNA ligase 3 [Homo sapiens]
gi|311346429|gb|ADP90008.1| DNA ligase 3 [Homo sapiens]
gi|311346432|gb|ADP90010.1| DNA ligase 3 [Homo sapiens]
gi|311346435|gb|ADP90012.1| DNA ligase 3 [Homo sapiens]
gi|311346438|gb|ADP90014.1| DNA ligase 3 [Homo sapiens]
gi|311346441|gb|ADP90016.1| DNA ligase 3 [Homo sapiens]
gi|311346444|gb|ADP90018.1| DNA ligase 3 [Homo sapiens]
gi|311346447|gb|ADP90020.1| DNA ligase 3 [Homo sapiens]
gi|311346450|gb|ADP90022.1| DNA ligase 3 [Homo sapiens]
gi|311346453|gb|ADP90024.1| DNA ligase 3 [Homo sapiens]
gi|311346456|gb|ADP90026.1| DNA ligase 3 [Homo sapiens]
gi|311346459|gb|ADP90028.1| DNA ligase 3 [Homo sapiens]
gi|311346462|gb|ADP90030.1| DNA ligase 3 [Homo sapiens]
gi|311346465|gb|ADP90032.1| DNA ligase 3 [Homo sapiens]
gi|311346468|gb|ADP90034.1| DNA ligase 3 [Homo sapiens]
gi|311346471|gb|ADP90036.1| DNA ligase 3 [Homo sapiens]
gi|311346474|gb|ADP90038.1| DNA ligase 3 [Homo sapiens]
gi|311346477|gb|ADP90040.1| DNA ligase 3 [Homo sapiens]
gi|311346480|gb|ADP90042.1| DNA ligase 3 [Homo sapiens]
gi|311346483|gb|ADP90044.1| DNA ligase 3 [Homo sapiens]
gi|311346486|gb|ADP90046.1| DNA ligase 3 [Homo sapiens]
gi|311346489|gb|ADP90048.1| DNA ligase 3 [Homo sapiens]
gi|311346492|gb|ADP90050.1| DNA ligase 3 [Homo sapiens]
gi|311346495|gb|ADP90052.1| DNA ligase 3 [Homo sapiens]
Length = 1009
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 191/411 (46%), Gaps = 46/411 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E ++V P + + +L+T
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRALSVQASLMT----- 479
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K V + K + F+ E KYDGER Q+H D +
Sbjct: 480 -----------PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 526
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 527 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH-- 580
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 581 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTK 638
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 639 ALDLADMITRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 694
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L + L
Sbjct: 695 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNEL 745
>gi|426238631|ref|XP_004013253.1| PREDICTED: DNA ligase 3 [Ovis aries]
Length = 885
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 193/411 (46%), Gaps = 46/411 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 374 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 430
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E + ++V P + + +L+T
Sbjct: 431 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKEPGQRRALSVQASLMT----- 481
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 482 -----------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD-HFSYF 528
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + LPF TL
Sbjct: 529 SRSLKPVLPHKVAHFKDFIPRAF----PGGHSMILDSEVLLIDNRTGRPLPFGTLGVH-- 582
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ LYD+ E P F+
Sbjct: 583 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKLLYDNMVEIPNRIMFSEMKQVTK 640
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 641 ASDLVDMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 696
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ AF+G+G + G+ FL+ C+D +++++ ++ K G +A L + L
Sbjct: 697 LGAFYGQGSKGGMMSIFLMGCFDPSSQKWCTVTKCAGGHDDATLARLQTEL 747
>gi|410339187|gb|JAA38540.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 1009
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 189/404 (46%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E ++V P + + +L+T
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRALSVQASLMT----- 479
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K V + K + F+ E KYDGER Q+H D +
Sbjct: 480 -----------PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 526
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 527 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH-- 580
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 581 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTK 638
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 639 ALDLADMITRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 694
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 695 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 738
>gi|91076374|ref|XP_967954.1| PREDICTED: similar to rCG33581 [Tribolium castaneum]
gi|270002897|gb|EEZ99344.1| ligase III [Tribolium castaneum]
Length = 853
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 144/282 (51%), Gaps = 24/282 (8%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
P+ PMLA+ K V + + K + ++ E KYDGER Q+H + + +SR+ +
Sbjct: 352 PVLPMLAEACKSVEQAMKKCPNGMYS-EIKYDGERVQVHK-QGSEFKYFSRSLK------ 403
Query: 491 PDVVLAVSRLKK------PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
P + V+ K P +LD EI+ D + K LPF TL +
Sbjct: 404 PVLPHKVAHFKNYIPQAFPHGTDLILDSEILMIDTQTGKPLPFGTLGIHKKSEFK----D 459
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
VC++ FD +Y NG L + + R++ L ++ E P F+ D +++ + +
Sbjct: 460 ASVCLFVFDCIYYNGDVLTDKPISFRKKILKENMTEIPNHIVFSEMEEIHDPNDLTQMIA 519
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGK 662
+ EGL++K D + YEP KR +WLK+KKDY+ ++ DS DL+ + A++G GK
Sbjct: 520 KVLKLGLEGLVLK--DITSVYEPGKR--HWLKVKKDYLFGGAMADSADLIVLGAWYGTGK 575
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ G+ FL+ CYD N+ F ++ K+ TG + LE+ + L
Sbjct: 576 KGGIMSIFLMGCYDEANDRFCTVSKVSTGHDDKTLEKLQTEL 617
>gi|448488415|ref|ZP_21607251.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum californiensis DSM
19288]
gi|445696105|gb|ELZ48198.1| DNA ligase I, ATP-dependent Dnl1 [Halorubrum californiensis DSM
19288]
Length = 653
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 149/584 (25%), Positives = 245/584 (41%), Gaps = 101/584 (17%)
Query: 226 TTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGRTES--HVKKQYQEMGDL 283
T +DL VV ++ PAH+ L +G A +A+A A G S V+ + E G++
Sbjct: 47 TATDDLPVVVRFLLGRVFPAHDTRTLDVGPALCREAVARAAGPNVSADDVEDRLAERGEI 106
Query: 284 GLVAKA-----SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA 338
G VA A R + D LT+ + R +A ++G S+ +K++ + L
Sbjct: 107 GAVAAAYDFGGQRGLAAFGSGRDALTVADLDAELRDLAAQSGDGSESRKRDALFGLFTRC 166
Query: 339 TDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA--AVYNEQHSKPPPNIQ---------SP 387
+ E +L RL+ ++R+G+ E T+ A+ +A A P +
Sbjct: 167 SPIEAAFLARLVLGEMRLGVGEGTVRDAVAEAFLAPKTPSGDADGPGVADDAADDADVED 226
Query: 388 LE-----EAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKG 442
LE +A V++ V Y ++ +G+ L S G P+ MLA+
Sbjct: 227 LELAAPGDAVAAVERALQVTNDYGRVAVRARDEGIAGLREE-SLRVGRPVQAMLAQAGT- 284
Query: 443 VSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV-------------------------- 476
++ V+ F E E K+DG R QIHY G
Sbjct: 285 ATDAVDAFG--EVAVETKFDGARVQIHYAPAGDAPAGDAPDRGARAGDAPGDTEGEAGAE 342
Query: 477 ---EIYSRNAERNTGKFPDVVLAVS-RLKKPSVRSFVLDCEIVAYDREKQKILPFQTLST 532
+YSRN + T P++V V+ R+ P +LD E+VA D + LPFQ +
Sbjct: 343 LGPRLYSRNMDDVTEALPEIVEYVAERVDVP----VILDGEVVAVDDDGDP-LPFQEVLR 397
Query: 533 RARKNVSLSDIK--VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
R R+ + ++ V + ++AFD L+ +G LL E LR R + L + + A
Sbjct: 398 RFRRKHDVERMREAVSLRLHAFDCLHADGDDLLDEPLRDRHDRLREVLPDAAADLALADD 457
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLD 650
+I +E A++DA EG+++K DA Y P R +WLK K D ++LD
Sbjct: 458 ADAIAAEER-----ASLDAGHEGVMLKNP--DAAYTPGDRGRDWLKRKPDV-----ETLD 505
Query: 651 LVPIAAFHGRGKRTGVYGAFLL--------ACYDSNNEE-----------------FQSI 685
V + A G G+R ++G FLL A D N+ + ++
Sbjct: 506 AVVVGAEWGEGRRAELFGTFLLAVREGDASAAQDDGNDAGDRSAADHDADDLAPAGYATV 565
Query: 686 CKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
K+ TG ++ L + + L V+ + F + +V +E
Sbjct: 566 GKVATGITDEALADLTERLEPHVVDETGTRVAFDPELVVEVGYE 609
>gi|332848014|ref|XP_511409.3| PREDICTED: DNA ligase 3 isoform 2 [Pan troglodytes]
gi|410212976|gb|JAA03707.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
gi|410306904|gb|JAA32052.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 1009
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 189/404 (46%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E ++V P + + +L+T
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRALSVQASLMT----- 479
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K V + K + F+ E KYDGER Q+H D +
Sbjct: 480 -----------PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 526
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 527 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH-- 580
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 581 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTK 638
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 639 ALDLADMITRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 694
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 695 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 738
>gi|426348729|ref|XP_004041980.1| PREDICTED: DNA ligase 3 isoform 1 [Gorilla gorilla gorilla]
Length = 1009
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 189/404 (46%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E ++V P + + +L+T
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRALSVQASLMT----- 479
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K V + K + F+ E KYDGER Q+H D +
Sbjct: 480 -----------PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 526
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 527 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH-- 580
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 581 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTK 638
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 639 ALDLADMITRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 694
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 695 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 738
>gi|223938585|ref|ZP_03630476.1| DNA ligase I, ATP-dependent Dnl1 [bacterium Ellin514]
gi|223892704|gb|EEF59174.1| DNA ligase I, ATP-dependent Dnl1 [bacterium Ellin514]
Length = 927
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 216/501 (43%), Gaps = 59/501 (11%)
Query: 244 PAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPL 303
P+ + L +G A++ AL T + Y + DLG A +++ P L
Sbjct: 425 PSSQNKTLNVGWAALRNALCGIDDLTPEAFHQIYLKHSDLGETAFEIFQTRAATLTP-TL 483
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
T+ +V + F + AG + K + L T E +YLI+++ S LRIGL E +
Sbjct: 484 TVERVNELFHQLQAAAGSLA---KLPLLLRALELCTPLEAKYLIKIITSDLRIGLKEGLV 540
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
A+ +A + + + + E A++ K+ N
Sbjct: 541 EEAIARAFDLPAEQVRQANLLLGDIGETARLAKR---------------------NELAN 579
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFT-------------CEYKYDGERAQIHY 470
P P+ MLA P + + + ++ Q E KYDG R Q+H
Sbjct: 580 IGIQPFRPVKSMLASPEESPTTVWDRIQSAHHERSGAGDGGPVPVWLEDKYDGIRCQLHK 639
Query: 471 LEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
+ D V +YSR+ + T F D+ A L F+LD EI+A + LPF L
Sbjct: 640 VND-RVALYSRDFKDITTTFLDLADAARHLPV----DFILDGEILAM--RGDRALPFSDL 692
Query: 531 STRA--RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFA 588
R R+ +V + AFD+L+ NG+ + L+ RRE L +S P F+ A
Sbjct: 693 QKRLGRRQGDLFMQEEVPIKYVAFDLLWLNGENYVNHPLQQRREKL-ESLPSLPENFRLA 751
Query: 589 TTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDS 648
+ ++EI D A + EGL++K D + Y P +RSL WLKLK Y +
Sbjct: 752 QITQANSINEIANTFDQARERKNEGLMVK--DPTSLYMPGRRSLAWLKLKMAYA-----T 804
Query: 649 LDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
LD V + A +G GKR V + A D N +E ++I K +G ++ + + + +KV
Sbjct: 805 LDCVVVGAEYGHGKRKSVLSDYTFAVRDENTDELKTIGKAYSGLTDIEIAQLTEHFLAKV 864
Query: 709 IPKPRPYYRFADTISPDVWFE 729
I R RF + + PD E
Sbjct: 865 I---RQRGRFHE-VEPDTVLE 881
>gi|860963|emb|CAA59230.1| DNA ligase III [Homo sapiens]
Length = 922
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 191/411 (46%), Gaps = 46/411 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 285 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 341
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E ++V P + + +L+T
Sbjct: 342 VLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRALSVQASLMT----- 392
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K V + K + F+ E KYDGER Q+H D +
Sbjct: 393 -----------PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 439
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 440 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH-- 493
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 494 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTK 551
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 552 ALDLADMITRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 607
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L + L
Sbjct: 608 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNEL 658
>gi|410259054|gb|JAA17493.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 1009
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 189/404 (46%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E ++V P + + +L+T
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRALSVQASLMT----- 479
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K V + K + F+ E KYDGER Q+H D +
Sbjct: 480 -----------PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 526
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 527 SRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH-- 580
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 581 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTK 638
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 639 ALDLADMITRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 694
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 695 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 738
>gi|19550955|gb|AAL91592.1|AF491645_1 ligase III, DNA, ATP-dependent [Homo sapiens]
gi|1113939|gb|AAA85022.1| DNA ligase III [Homo sapiens]
Length = 862
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 191/407 (46%), Gaps = 52/407 (12%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC---EPQYLIRLLQSKLRIGLA 359
LTI +V + ++K +D Q++ AL A+ C + + +IRL++ L++
Sbjct: 285 LTIQEVDEFLLRLSKLTKEDEQQQ------ALQDIASRCTANDLKCIIRLIKHDLKMNSG 338
Query: 360 EQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDG 416
+ +L AL A + S+ N+Q +E ++V P + + +L+T
Sbjct: 339 AKHVLDALDPNAYEAFKASR---NLQDVVERVLHNAQEV-EKEPGQRRALSVQASLMT-- 392
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
P+ PMLA+ K V + K + F+ E KYDGER Q+H D
Sbjct: 393 --------------PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HF 436
Query: 477 EIYSRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLST 532
+SR+ + F D + P S +LD E++ D + K LPF TL
Sbjct: 437 SYFSRSLKPVLPHKVAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGV 492
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
K + D +VC++ FD +Y N L+ L RR+ L+D+ E P F+
Sbjct: 493 H--KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKR 548
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLD 650
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ D
Sbjct: 549 VTKALDLADMITRVIQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTAD 604
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
LV + AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 605 LVVLGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 651
>gi|354466771|ref|XP_003495846.1| PREDICTED: DNA ligase 3 isoform 3 [Cricetulus griseus]
Length = 955
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 191/402 (47%), Gaps = 43/402 (10%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V D F L + K+ ++++ + A A D + +IRL++ L++ +
Sbjct: 374 LTIQEV-DAFLLHLSKLTKEDEQQQALQDIASRCTANDL--KCIIRLIKHDLKMNSGAKH 430
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQV-FSVLPVYEKIVPALLTDGVWNLS 421
+L AL A + S+ N+Q +E ++V + + +L+T
Sbjct: 431 VLDALDPNAYEAFKASR---NLQDVVERVLHNEQEVKYQGQRRTLSVQASLMT------- 480
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
P+ PMLA+ K + + K+ + F+ E KYDGER Q+H D +SR
Sbjct: 481 ---------PVQPMLAEACKSIEYAMKKYPNGMFS-EIKYDGERVQVHKKGD-HFSYFSR 529
Query: 482 NAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
+ + F D + P +S +LD E++ D K LPF TL K
Sbjct: 530 SLKPVLPHKVAHFKDYIPKAF----PGGQSMILDSEVLLIDNNTGKPLPFGTLGVH--KK 583
Query: 538 VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD 597
+ D +VC++ FD +Y N L+ L RR+ L+D+ E F+
Sbjct: 584 AAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKLLHDNMVEIQNRIMFSEMKQVTKAS 641
Query: 598 EIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIA 655
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV +
Sbjct: 642 DLADMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 697
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
AF+G+G + G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 698 AFYGQGSKGGMMSIFLMGCYDPDSQKWCTVTKCAGGHDDATL 739
>gi|354466769|ref|XP_003495845.1| PREDICTED: DNA ligase 3 isoform 2 [Cricetulus griseus]
gi|344238283|gb|EGV94386.1| DNA ligase 3 [Cricetulus griseus]
Length = 1014
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 191/402 (47%), Gaps = 43/402 (10%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V D F L + K+ ++++ + A A D + +IRL++ L++ +
Sbjct: 374 LTIQEV-DAFLLHLSKLTKEDEQQQALQDIASRCTANDL--KCIIRLIKHDLKMNSGAKH 430
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQV-FSVLPVYEKIVPALLTDGVWNLS 421
+L AL A + S+ N+Q +E ++V + + +L+T
Sbjct: 431 VLDALDPNAYEAFKASR---NLQDVVERVLHNEQEVKYQGQRRTLSVQASLMT------- 480
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
P+ PMLA+ K + + K+ + F+ E KYDGER Q+H D +SR
Sbjct: 481 ---------PVQPMLAEACKSIEYAMKKYPNGMFS-EIKYDGERVQVHKKGD-HFSYFSR 529
Query: 482 NAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
+ + F D + P +S +LD E++ D K LPF TL K
Sbjct: 530 SLKPVLPHKVAHFKDYIPKAF----PGGQSMILDSEVLLIDNNTGKPLPFGTLGVH--KK 583
Query: 538 VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD 597
+ D +VC++ FD +Y N L+ L RR+ L+D+ E F+
Sbjct: 584 AAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKLLHDNMVEIQNRIMFSEMKQVTKAS 641
Query: 598 EIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIA 655
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV +
Sbjct: 642 DLADMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 697
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
AF+G+G + G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 698 AFYGQGSKGGMMSIFLMGCYDPDSQKWCTVTKCAGGHDDATL 739
>gi|241614142|ref|XP_002406581.1| DNA ligase, putative [Ixodes scapularis]
gi|215500833|gb|EEC10327.1| DNA ligase, putative [Ixodes scapularis]
Length = 851
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 187/417 (44%), Gaps = 56/417 (13%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LT+ V +++ +D QE+ ++ L V T + + ++RL++ +RI +
Sbjct: 272 LTLQDVDHHLDRLSRLTREDDQEQ---LLRHLSVRCTSNDLKMVVRLIKHDIRINSGPKH 328
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL A + Q S+ LE+ + K+ N+S
Sbjct: 329 ILEALHPNAYQSFQASRN-------LEDVVRTAKEG--------------------NVSV 361
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
+ S P+ PMLA+P + D + E KYDGER Q+H + + +SR+
Sbjct: 362 SASLM--TPMIPMLAEPCGSPDAAFARCPDGMY-AEIKYDGERVQLHK-QGSNFLFFSRS 417
Query: 483 AERNTGKFPDVVLAVSRLKK------PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
+ P V LK P + VLD EI+ D + K LPF TL R
Sbjct: 418 LK------PVSPHKVQHLKDFIPKAFPHGKDLVLDSEILMVDTQTGKPLPFGTLGIHKR- 470
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
+ D VC++ FD L+ NG+ LL LR RRE L + F+
Sbjct: 471 -AAFKD--ASVCLFVFDCLHYNGRSLLDTPLRQRREVLQANMTPIKNHVMFSEKHVIKTR 527
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPI 654
D++Q+ + ++ EGL++K D D YEP KR +W+K+KKDY+E S+ DS DL +
Sbjct: 528 DQLQELIADVLNQGLEGLVLK--DPDGVYEPGKR--HWMKVKKDYLEGGSMADSADLAVL 583
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
A+ G G + G+ FL+ C++ + ++ K+ G + LE + L I K
Sbjct: 584 GAYFGTGNKGGIMSIFLMGCWNPATGRWCTVTKVHGGHDDTTLERLQTELEMTKISK 640
>gi|354466767|ref|XP_003495844.1| PREDICTED: DNA ligase 3 isoform 1 [Cricetulus griseus]
Length = 942
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 191/402 (47%), Gaps = 43/402 (10%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V D F L + K+ ++++ + A A D + +IRL++ L++ +
Sbjct: 374 LTIQEV-DAFLLHLSKLTKEDEQQQALQDIASRCTANDL--KCIIRLIKHDLKMNSGAKH 430
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQV-FSVLPVYEKIVPALLTDGVWNLS 421
+L AL A + S+ N+Q +E ++V + + +L+T
Sbjct: 431 VLDALDPNAYEAFKASR---NLQDVVERVLHNEQEVKYQGQRRTLSVQASLMT------- 480
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
P+ PMLA+ K + + K+ + F+ E KYDGER Q+H D +SR
Sbjct: 481 ---------PVQPMLAEACKSIEYAMKKYPNGMFS-EIKYDGERVQVHKKGD-HFSYFSR 529
Query: 482 NAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN 537
+ + F D + P +S +LD E++ D K LPF TL K
Sbjct: 530 SLKPVLPHKVAHFKDYIPKAF----PGGQSMILDSEVLLIDNNTGKPLPFGTLGVH--KK 583
Query: 538 VSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD 597
+ D +VC++ FD +Y N L+ L RR+ L+D+ E F+
Sbjct: 584 AAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKLLHDNMVEIQNRIMFSEMKQVTKAS 641
Query: 598 EIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIA 655
++ ++ + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV +
Sbjct: 642 DLADMINRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLG 697
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
AF+G+G + G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 698 AFYGQGSKGGMMSIFLMGCYDPDSQKWCTVTKCAGGHDDATL 739
>gi|345107342|ref|YP_004821507.1| ATP-dependent DNA ligase [Yoka poxvirus]
gi|344267416|gb|AEN03743.1| ATP-dependent DNA ligase [Yoka poxvirus]
Length = 551
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 222/495 (44%), Gaps = 51/495 (10%)
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
VY+ + P + I + IIK + + ++ ++E G +G K S
Sbjct: 37 VYIIIKLLLPMLDCRMYNINNKQIIKLYSVILDQQYDNMLNDFEEYGYIGDTIKTFFESS 96
Query: 295 SMMR--KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQS 352
+ K LT+ V D F K+S++ K + ++ +T + + +I L+
Sbjct: 97 VKITPLKTSILTLKDV-DEFLTYLSNETKESRQIK--LLTSITRVSTSNDLKCIIMLISK 153
Query: 353 KLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPAL 412
L+I + +L A+ + Y+ K N+Q ++ A +
Sbjct: 154 DLKIKAGPRYVLNAISDNS-YDIFRKKN--NLQYVVDNAKE------------------- 191
Query: 413 LTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLE 472
L N + PI PMLA+ + V + KF + F E KYDGER Q+H +
Sbjct: 192 -------LHNNITINVMTPINPMLAESCESVDKAFKKFPNGIFA-EIKYDGERVQVH--K 241
Query: 473 DGS-VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
+G+ +SRN + T D + +V S +LD EIV D+ K LPF +L
Sbjct: 242 NGNHFAFFSRNMKPVTKHKVDYLNEYIPKAFKNVSSLILDSEIVLVDKN-NKPLPFGSLG 300
Query: 532 TRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTL 591
+K + S + C++ FD L+ +G + L RR L + E P +
Sbjct: 301 IHKKKEYNDSSL----CLFVFDCLFFDGFDMTDIPLNDRRSILQEIIVEIPNRIMLSELY 356
Query: 592 TSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSL 649
+++++ LD + EGL++K D +++Y P KR WLK+KKDY+ ++ DS+
Sbjct: 357 VVKEINQLSNILDNVLSQKLEGLVVK--DINSSYLPGKRK--WLKIKKDYLNNGALADSI 412
Query: 650 DLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAM--LEERSSSLRSK 707
DLV + A++G+G + G+ FL+ CYD N+ +++++ K E + L+ + ++
Sbjct: 413 DLVVLGAYYGKGSKGGIMAVFLMGCYDDNDCKWKTVTKCSGHDDETLNYLQTHLNMIKIN 472
Query: 708 VIPKPRPYYRFADTI 722
PK P + + I
Sbjct: 473 KDPKKIPDWLIVNKI 487
>gi|406977514|gb|EKD99665.1| hypothetical protein ACD_22C00214G0006, partial [uncultured
bacterium]
Length = 373
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 159/324 (49%), Gaps = 33/324 (10%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY---------------LEDGS 475
PI P + +EI+ K + E+K+DG R Q+H L +GS
Sbjct: 1 PIMPQRCQRLSDTNEIIEKMGTV--FAEFKFDGTRVQLHMDRKKEDTSTKEEQNQLFNGS 58
Query: 476 -----VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
++ Y+RN E T ++PD+V A ++ +S +LD E + Y++E LPFQ +
Sbjct: 59 KEKILIKTYTRNLEETTHQYPDIVEAAE--EQIDAKSVILDGEAIGYNKETGDFLPFQKI 116
Query: 531 STRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF-FQFA 588
R RK +V+ + V + + FDILY +G+ L+ RR+ L + PG +
Sbjct: 117 MQRKRKHDVAETAKNVPLKYFVFDILYLDGKSLVDLPFTERRDILSKVIK--PGIVIEVD 174
Query: 589 TTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDS 648
+ + + D +E+ + + + + EG+++K +D A Y+ R+ W+KLK+ + + DS
Sbjct: 175 SNIKTADAEELNDYFELSKEKGLEGVVVKKVD--AKYQAGARAYTWIKLKRADTQLLDDS 232
Query: 649 LDLVPIAAFHGRGKRT--GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRS 706
+D V + + G+G RT G+ G FL YDS + +++I K+GTG EA + S
Sbjct: 233 VDCVVLGYYLGKGIRTEFGI-GGFLAGVYDSKTQTYKTITKVGTGLKEADFARLKAEADS 291
Query: 707 KVIPKPRPYYRFADTISPDVWFEP 730
+ I + P+VW P
Sbjct: 292 QKIASQPNNVEISKNFYPNVWVNP 315
>gi|221043184|dbj|BAH13269.1| unnamed protein product [Homo sapiens]
Length = 738
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 139/280 (49%), Gaps = 20/280 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K V + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 209 PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 266
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 267 VAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKAAFQD--AN 318
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ +
Sbjct: 319 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKALDLADMITRV 378
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 379 IQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 434
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
G+ FL+ CYD ++++ ++ K G +A L + L
Sbjct: 435 GMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNEL 474
>gi|397494352|ref|XP_003818045.1| PREDICTED: DNA ligase 3 [Pan paniscus]
Length = 738
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 137/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K V + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 209 PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 266
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 267 VAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKAAFQD--AN 318
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ +
Sbjct: 319 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKALDLADMITRV 378
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 379 IQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 434
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 435 GMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 467
>gi|388452388|ref|NP_001252899.1| DNA ligase 3 [Macaca mulatta]
gi|355568415|gb|EHH24696.1| DNA ligase 3 [Macaca mulatta]
gi|380812704|gb|AFE78226.1| DNA ligase 3 isoform alpha precursor [Macaca mulatta]
gi|383418321|gb|AFH32374.1| DNA ligase 3 isoform alpha precursor [Macaca mulatta]
Length = 1009
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 20/280 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 480 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 537
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + + LPF TL K + D +
Sbjct: 538 VAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGRPLPFGTLGVH--KKAAFQD--AN 589
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ +
Sbjct: 590 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKASDLADMITRV 649
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 650 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 705
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
G+ FL+ CYD ++++ ++ K G +A L + L
Sbjct: 706 GMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNEL 745
>gi|134045832|ref|YP_001097318.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus maripaludis C5]
gi|166215372|sp|A4FY19.1|DNLI_METM5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|132663457|gb|ABO35103.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus maripaludis C5]
Length = 573
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 140/523 (26%), Positives = 242/523 (46%), Gaps = 60/523 (11%)
Query: 199 VFDMISNETGRILITDIVCNMLRTV-METTPEDLVPVVYLAANKIAPAHEGLELGIGDAS 257
+ D I T R+ TD ++ + PE+L V + ++ E E+GIG
Sbjct: 9 ILDKIEKTTKRLEKTDYFVELIDFIKTNGKPENLKQVSQITIGRVFAEFENKEIGIGPNL 68
Query: 258 IIKALAEACGRTESHVKKQYQEMGDLGL-VAKASRSSQSMMRKPDPLTITKVFDTFRLIA 316
+++A+ + G +E +K + ++ GD+G V S + + + PLT+ +++ T + ++
Sbjct: 69 LLEAV-KTTGISEKDLKAEIKKTGDIGTAVENLSSNIKQVSLFSQPLTLEEMYSTLKKLS 127
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
+ G SQ+KK I LL+ A E +Y+ RL+ +RIG+ T+LA+ N++
Sbjct: 128 EIEGNSSQKKKIRIISNLLILANPVESRYISRLILEDMRIGMNIPTILASFSNYFNVNKE 187
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
+ V+++++V + L++ + PI PML
Sbjct: 188 N-----------------VEKIYAVTNDIGLLGEKLISGSDIENDSELHLKVFRPIKPML 230
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
A+ T + + + + + +F E KYDG R Q+H +G V+IYSR E T P++
Sbjct: 231 AQLTPSIEDAIIETKIPQF--ETKYDGARVQVHK-SNGEVKIYSRRLEDITNSVPEL--- 284
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDI 554
V +KK + + +L+ E VA D K PFQ + R R+ ++ + K+ + IY FD+
Sbjct: 285 VEEIKKIDIDNIILEGECVAMDLSSGKPRPFQDILRRFRRKYDINKMAEKIALRIYFFDV 344
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK------------- 601
LY N + L+ LR RRE L F G + T L I+ + + K
Sbjct: 345 LYYN-RGLIDTPLRNRREILEKLF----GTNDWDTELEKIEKEILSKKMLFSSFKLNSDD 399
Query: 602 ------FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
F + ++ EG++IK + DA Y P R K+K ++LD+V
Sbjct: 400 PNLAKEFFNWSLSIGHEGVMIK--NPDAPYTPGSRVKTMYKVKPTL-----ENLDVVVTR 452
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
A G GKR YG++ ++ D + I +G+G +E LE
Sbjct: 453 AKIGMGKRKDWYGSYEISVKD-DESNLHVIGNVGSGLTEDDLE 494
>gi|126337295|ref|XP_001365353.1| PREDICTED: DNA ligase 4 [Monodelphis domestica]
Length = 911
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 226/486 (46%), Gaps = 60/486 (12%)
Query: 299 KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGL 358
K LTI +V D LIA + ++ K + L+ ++ E ++LIR++ L++G
Sbjct: 139 KQGSLTIQQVNDILDLIASNNSANRKDLVKKNLLQLITQSSALEQKWLIRMIIKDLKLGF 198
Query: 359 AEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
++QT+ + + A E H N+ + LE K+ +Q+ + L I L +
Sbjct: 199 SQQTIFSLFHRDAA--ELH-----NVTTDLE---KVCRQLHNPLVGLSDISITLFS---- 244
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDME---FTCEYKYDGERAQIHYLEDGS 475
PMLA V++I +DM+ F E K DGER Q+H +DG
Sbjct: 245 ------------AFKPMLA----AVADIQRIEKDMKHQGFYIETKLDGERMQMH--KDGD 286
Query: 476 V-EIYSRNAERNTGKFPDVVLA------VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQ 528
V + +SRN T +F D L + + K ++++ +LD E++AY+ Q + +
Sbjct: 287 VYKFFSRNGYDYTEQFGDSSLNGSLIPFIHKAFKTNIQNCILDGEMMAYNPNTQTFMQ-K 345
Query: 529 TLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFA 588
++ V SD++ C+ FD+L N + L E LR R E + F G +
Sbjct: 346 GSKFDIKRMVEDSDLQTCYCV--FDVLMVNNKKLGHEALRKRYEIISTVFTPIKGRLEVV 403
Query: 589 TTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDS 648
+ E+ L+ A+D EG++IK + + Y+P KR WLK+K +YI + D
Sbjct: 404 QKTEANTKKEVIDALNEAIDKREEGIMIK--NPLSIYKPDKRGEGWLKIKPEYINELMDE 461
Query: 649 LDLVPIAAFHGRGKRTGVYGAFLLACYDS-----NNEEFQSICKIGTGFSEAMLEERSSS 703
LD++ + + G+G R G+ FL A ++ F ++C++G+G++ L +
Sbjct: 462 LDILIVGGYWGKGLRGGMMSHFLCAVAETPPPGEKPSVFYTLCRVGSGYTMKELYD---- 517
Query: 704 LRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPA-SIVYDSQITCLPSSYMPFSRS 762
L K+ +P+++ A P+ TE+PE P S++ + + SS M +
Sbjct: 518 LGLKLSKHWKPFHKRA---PPNSILCGTEKPEVYIEPCNSVIVQVKAAEIVSSDMYKTNC 574
Query: 763 YFRFGR 768
RF R
Sbjct: 575 TLRFPR 580
>gi|289580290|ref|YP_003478756.1| ATP-dependent DNA ligase I [Natrialba magadii ATCC 43099]
gi|448283962|ref|ZP_21475227.1| ATP-dependent DNA ligase I [Natrialba magadii ATCC 43099]
gi|289529843|gb|ADD04194.1| DNA ligase I, ATP-dependent Dnl1 [Natrialba magadii ATCC 43099]
gi|445572057|gb|ELY26599.1| ATP-dependent DNA ligase I [Natrialba magadii ATCC 43099]
Length = 610
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 194/410 (47%), Gaps = 53/410 (12%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LT+ ++ DT +A G SQ++K + + L + E +YL RL+ S++RIG+ E T
Sbjct: 158 LTVREINDTLTDLAAAEGSGSQDRKVDLLFGLFNRCSSDEARYLARLVLSEMRIGVGEGT 217
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+ A+ +A P Q P+E A ++ Y ++ DGV L +
Sbjct: 218 VRDAIAEA------FEVP----QEPVERALQVSND-------YGQVAETAREDGVDGL-D 259
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY----------LE 472
G P+ MLA+ V++ + ++ E E+KYDG R Q+HY
Sbjct: 260 EIDLEIGRPVQAMLAQAGT-VTDALEEWD--EAAVEWKYDGARIQLHYDPAGPGGPDGDS 316
Query: 473 DGSVEIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLS 531
+G ++SRN E T P+VV A L P+ +LD E+VA D + LPFQ +
Sbjct: 317 NGETHVFSRNMEAVTDALPEVVEFADEHLDGPA----ILDGEVVAIDDDGNP-LPFQEVL 371
Query: 532 TRARKNVSLSDIKVDVCI--YAFDILYRNGQPLLQEQLRVRREHLYDSF----EEEPGFF 585
R R+ ++ + +V + FD L+ +G LL+E L R L ++EP
Sbjct: 372 KRFRRKHDVAKARENVSVRPVFFDCLHADGDDLLEEPLVERHNQLESVLAMGPQQEPEEI 431
Query: 586 Q-FATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F+ + + DEI+ A++A EG+++K + D+ Y P +R NW K K D
Sbjct: 432 DGFSLLWVTDNPDEIEAVDADALEAGHEGIMLK--NPDSAYSPGRRGKNWQKRKPDV--- 486
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSE 694
++LD V A G G+R G F L+ D ++ +++ K+ TG ++
Sbjct: 487 --ETLDCVVTGAEWGEGRRATFLGTFELSVRDGDD--LETVGKVATGITD 532
>gi|432092332|gb|ELK24952.1| DNA ligase 4 [Myotis davidii]
Length = 1021
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 217/478 (45%), Gaps = 55/478 (11%)
Query: 279 EMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA 338
+ GD ++A + + + LTI +V D IA ++ K + L+ +
Sbjct: 231 DAGDFAMIAYFVLKPRCLQK--GSLTIQQVNDILDSIATNNSAKRKDLIKKSLLQLITQS 288
Query: 339 TDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQV 398
+ E ++LIR++ L++G ++QT+ + A E H N+ + LE K+ +Q
Sbjct: 289 SALEQKWLIRMIVKDLKLGFSQQTVFSLFHNDAA--ELH-----NVTTDLE---KVCRQ- 337
Query: 399 FSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
L D LS+ S T P PMLA + I ++ F E
Sbjct: 338 --------------LHDPSVGLSDI-SITLFSPFKPMLA-AIADIGRIEKDMKNQSFYIE 381
Query: 459 YKYDGERAQIHYLEDGSV-EIYSRNAERNTGKFPD------VVLAVSRLKKPSVRSFVLD 511
K DGER Q+H +DG+V E +SRN + T +F D + + + ++ +LD
Sbjct: 382 TKLDGERMQMH--KDGNVYEYFSRNGHKFTQQFGDSPQKGSLTPFIHNAFRTDIQICILD 439
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
E++AY+ Q + + ++ V SD++ C+ FD+L N + L +E LR R
Sbjct: 440 GEMMAYNPNTQTFMQ-KGNKFDIKRMVEDSDLQTCYCV--FDVLMVNNKKLGRETLRKRY 496
Query: 572 EHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRS 631
E L PG + + E+ L+ A+D EG++IK + Y+P KR
Sbjct: 497 EILSSILTPIPGRIEIVEKTQAHTNKEVIDALNEAIDKREEGIMIK--HPLSIYKPDKRG 554
Query: 632 LNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEE-----FQSIC 686
WLK+K +Y+ + D LD++ + + G+G R G+ FL A + + F ++C
Sbjct: 555 EGWLKIKPEYVNGLMDELDIIIVGGYWGKGARGGMMSHFLCAVAEKHASGEKPSVFHTLC 614
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASIV 744
+IG+G++ L + L K+ +P+++ A P TE+PE P + V
Sbjct: 615 RIGSGYTMKELYD----LGLKLAKHWKPFHKKA---PPSSILFGTEKPEVYIEPCNSV 665
>gi|74217593|dbj|BAE33548.1| unnamed protein product [Mus musculus]
Length = 1011
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 481 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD-HFSCFSRSLKPVLPHK 538
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P +S +LD E++ D K LPF TL K + D +
Sbjct: 539 VAHFKDYIPKAF----PGGQSMILDSEVLLIDNNTGKPLPFGTLGVH--KKAAFQD--AN 590
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E F+ ++ ++
Sbjct: 591 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIRNRIMFSEMKQVTKASDLADMINRV 650
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 651 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 706
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 707 GMMSIFLMGCYDPDSQKWCTVTKCAGGHDDATL 739
>gi|193700124|ref|XP_001943689.1| PREDICTED: DNA ligase 3-like [Acyrthosiphon pisum]
Length = 875
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 181/401 (45%), Gaps = 36/401 (8%)
Query: 331 IKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEE 390
K++ T + + +IRL+ LRI + +L AL A Q S +++S ++
Sbjct: 279 FKSIAKLCTGNDLKMIIRLVMHDLRINCGPKFILGALHSDAYEAYQTSH---DLKSVVQN 335
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF 450
A + ++G N+ + PI PMLA+P K + + K
Sbjct: 336 ACSCDSS-------------KIASNGKMNIK----LSLLTPILPMLAEPCKNLDDFFKKC 378
Query: 451 QDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVL 510
+ ++ E KYDGER Q+H E + +SR+ + G D+ + +L
Sbjct: 379 PNGIYS-EIKYDGERVQLHKSET-QFKFFSRSLKPVLGHKVDLFKQYIPKAFQHGKEIIL 436
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
DCE++ YD + K LPF TL + + C++ FD +Y NG LL + R
Sbjct: 437 DCEVLMYDHKTNKPLPFGTLGIHKKSKFE----DANPCLFVFDCMYYNGVSLLDRTIVER 492
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKR 630
R+ L + G F+ + E++ ++ + EGL++K D YEP KR
Sbjct: 493 RKILMQNMTPIKGHIMFSEVKELHNTKELKLMVEHVLKQGLEGLVLK--DLTGVYEPGKR 550
Query: 631 SLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
+W K+KKDY+ S+ DS DLV + A+ G G + G+ FL+ CY+ +++ ++ K+
Sbjct: 551 --HWQKIKKDYLFDGSMADSADLVVLGAWFGTGNKGGMMSIFLMGCYNEAKKKWCTVTKV 608
Query: 689 GTGFSEAMLEERSSSLR----SKVIPKPRPYYRFADTISPD 725
G + LE L+ SK K + + T+ PD
Sbjct: 609 HGGHDDKTLERLQGELKMIKISKDPEKVPEWLKCTKTMIPD 649
>gi|148683723|gb|EDL15670.1| ligase III, DNA, ATP-dependent, isoform CRA_b [Mus musculus]
Length = 953
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 482 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD-HFSYFSRSLKPVLPHK 539
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P +S +LD E++ D K LPF TL K + D +
Sbjct: 540 VAHFKDYIPKAF----PGGQSMILDSEVLLIDNNTGKPLPFGTLGVH--KKAAFQD--AN 591
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E F+ ++ ++
Sbjct: 592 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIRNRIMFSEMKQVTKASDLADMINRV 651
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 652 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 707
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 708 GMMSIFLMGCYDPDSQKWCTVTKCAGGHDDATL 740
>gi|195391356|ref|XP_002054326.1| GJ24382 [Drosophila virilis]
gi|194152412|gb|EDW67846.1| GJ24382 [Drosophila virilis]
Length = 818
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 207/450 (46%), Gaps = 48/450 (10%)
Query: 272 HVKKQYQEM-----GDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEK 326
HV +Q + GD+ + +S S + KP + + + ++ + + +++
Sbjct: 105 HVDQQQMHLDLEQDGDISETLRKHFASSSKL-KPQAQSKLYLHEVENMLCQLEQRTKEDE 163
Query: 327 KKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQS 386
+ ++ + ATD + + IRL++ LRI + +L A G A P QS
Sbjct: 164 QTEVLQEVCKQATDLDLRTFIRLIKQDLRINARARHILDAFGPEAY---------PAYQS 214
Query: 387 PLEEAAKIVKQVFSVL---PVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
+ K++ + F+ P K +P T + + PI PMLA K V
Sbjct: 215 TRD--LKLIVENFAGTQGKPKSLKGLPKAATKS--SKKAIGAIQVMTPISPMLANACKSV 270
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERNTGKFPDVVLAVSRLKK 502
E K ++ E KYDGER QIH + GS + +SRN + P V + LK
Sbjct: 271 EEAFKKNPGGLYS-EVKYDGERVQIH--KHGSEFKFFSRNLK------PVVDHKIKELKD 321
Query: 503 ------PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILY 556
P +LD EI+ + + ++LPF TL + + VC++ FD L
Sbjct: 322 YIPRAFPGANDMILDSEIILVNTKTGELLPFGTLGAHKKHTYA----NASVCLFVFDCLL 377
Query: 557 RNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLII 616
+G L Q RRE L + + Q + + +E+ + A+ EG+++
Sbjct: 378 YDGDDLTQLSFCKRREILEQNIKPIKHHVQLSESQFLKTKNELAMMTAKVLQANLEGVVL 437
Query: 617 KTMDRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLAC 674
K+ + TY+P KR NWLK+KKDY+ + D+ DLV + A++G GK+ GV FL+ C
Sbjct: 438 KS--PEGTYQPGKR--NWLKVKKDYLFGGKMADTADLVVLGAWYGSGKKGGVLSIFLMGC 493
Query: 675 YDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
YD+ + ++++ K+ +G +A +E SL
Sbjct: 494 YDARDRLWKTVTKVHSGLDDASNDEVHESL 523
>gi|74151892|dbj|BAE29732.1| unnamed protein product [Mus musculus]
Length = 1011
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 481 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD-HFSYFSRSLKPVLPHK 538
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P +S +LD E++ D K LPF TL K + D +
Sbjct: 539 VAHFKDYIPKAF----PGGQSMILDSEVLLIDNNTGKPLPFGTLGVH--KKAAFQD--AN 590
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E F+ ++ ++
Sbjct: 591 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIRNRIMFSEMKQVTKASDLADMINRV 650
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 651 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 706
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 707 GMMSIFLMGCYDPDSQKWCTVTKCAGGHDDATL 739
>gi|149053629|gb|EDM05446.1| rCG33581, isoform CRA_a [Rattus norvegicus]
Length = 956
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 482 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD-HFSYFSRSLKPVLPHK 539
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P +S +LD E++ D K LPF TL K + D +
Sbjct: 540 VAHFKDYIPKAF----PGGQSMILDSEVLLIDNNTGKPLPFGTLGVH--KKAAFQD--AN 591
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E F+ ++ ++
Sbjct: 592 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIRNRIMFSEMKQVTKASDLADMINRV 651
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 652 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 707
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 708 GMMSIFLMGCYDPDSQKWCTVTKCAGGHDDATL 740
>gi|71061470|ref|NP_034846.2| DNA ligase 3 [Mus musculus]
gi|29165722|gb|AAH49240.1| Ligase III, DNA, ATP-dependent [Mus musculus]
gi|53733359|gb|AAH83500.1| Ligase III, DNA, ATP-dependent [Mus musculus]
gi|74138035|dbj|BAE25421.1| unnamed protein product [Mus musculus]
gi|148683722|gb|EDL15669.1| ligase III, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
Length = 1012
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 482 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD-HFSYFSRSLKPVLPHK 539
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P +S +LD E++ D K LPF TL K + D +
Sbjct: 540 VAHFKDYIPKAF----PGGQSMILDSEVLLIDNNTGKPLPFGTLGVH--KKAAFQD--AN 591
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E F+ ++ ++
Sbjct: 592 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIRNRIMFSEMKQVTKASDLADMINRV 651
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 652 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 707
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 708 GMMSIFLMGCYDPDSQKWCTVTKCAGGHDDATL 740
>gi|149053630|gb|EDM05447.1| rCG33581, isoform CRA_b [Rattus norvegicus]
Length = 1015
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 482 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD-HFSYFSRSLKPVLPHK 539
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P +S +LD E++ D K LPF TL K + D +
Sbjct: 540 VAHFKDYIPKAF----PGGQSMILDSEVLLIDNNTGKPLPFGTLGVH--KKAAFQD--AN 591
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E F+ ++ ++
Sbjct: 592 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIRNRIMFSEMKQVTKASDLADMINRV 651
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 652 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 707
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 708 GMMSIFLMGCYDPDSQKWCTVTKCAGGHDDATL 740
>gi|341940451|sp|P97386.2|DNLI3_MOUSE RecName: Full=DNA ligase 3; AltName: Full=DNA ligase III; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 3
Length = 1015
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 485 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD-HFSYFSRSLKPVLPHK 542
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P +S +LD E++ D K LPF TL K + D +
Sbjct: 543 VAHFKDYIPKAF----PGGQSMILDSEVLLIDNNTGKPLPFGTLGVH--KKAAFQD--AN 594
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E F+ ++ ++
Sbjct: 595 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIRNRIMFSEMKQVTKASDLADMINRV 654
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 655 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 710
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 711 GMMSIFLMGCYDPDSQKWCTVTKCAGGHDDATL 743
>gi|58865590|ref|NP_001012011.1| DNA ligase 3 [Rattus norvegicus]
gi|55249814|gb|AAH85959.1| Ligase III, DNA, ATP-dependent [Rattus norvegicus]
Length = 943
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 20/273 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 482 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKKGD-HFSYFSRSLKPVLPHK 539
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P +S +LD E++ D K LPF TL K + D +
Sbjct: 540 VAHFKDYIPKAF----PGGQSMILDSEVLLIDNNTGKPLPFGTLGVH--KKAAFQD--AN 591
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E F+ ++ ++
Sbjct: 592 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIRNRIMFSEMKQVTKASDLADMINRV 651
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 652 IREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 707
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
G+ FL+ CYD +++++ ++ K G +A L
Sbjct: 708 GMMSIFLMGCYDPDSQKWCTVTKCAGGHDDATL 740
>gi|417405223|gb|JAA49329.1| Putative atp-dependent dna ligase i [Desmodus rotundus]
Length = 911
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 226/505 (44%), Gaps = 56/505 (11%)
Query: 277 YQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLV 336
+ + GD ++A + + + LTI +V DT IA ++ K L+
Sbjct: 119 HGDAGDFAMIAYFVLKPRCLQK--GQLTIQQVNDTLDSIASNNSARRKDLVKKSFLHLIS 176
Query: 337 AATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVK 396
+ E ++LIR++ L++G+++QT+ + AV E H N+ + LE K+ +
Sbjct: 177 KCSALEQKWLIRMIVKDLKLGVSQQTVFSVFHNDAV--ELH-----NVTTDLE---KVCR 226
Query: 397 QVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFT 456
Q L D LS+ S T P PMLA + I ++ F
Sbjct: 227 Q---------------LHDPSVGLSDI-SITLFSPFKPMLA-AIADIERIEKDMKNQSFY 269
Query: 457 CEYKYDGERAQIHYLEDGSV-EIYSRNAERNTGKFP------DVVLAVSRLKKPSVRSFV 509
E K DGER Q+H +DG+V E +SRN + T +F + + K + +
Sbjct: 270 IETKLDGERMQMH--KDGNVYEYFSRNGYKYTEQFGASPQEGSLTPFIHNAFKTDTQICI 327
Query: 510 LDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRV 569
LD E++AY+ Q + + ++ V SD++ C+ FD+L N + L E L+
Sbjct: 328 LDGEMMAYNPTTQTFMQ-KGNKFDIKRMVEYSDLQTCYCV--FDVLMVNNKKLGHETLKK 384
Query: 570 RREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSK 629
R E L F PG + + E+ L+ A+D EG++IK + Y+P K
Sbjct: 385 RYEILSSIFTPMPGRIEIVQKTQAHTNKEVIDALNEAIDKREEGIMIK--HPLSIYKPDK 442
Query: 630 RSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYD-----SNNEEFQS 684
R WLK+K +Y+ + D LD++ + + G+G R G+ FL A + F +
Sbjct: 443 RGEGWLKIKPEYVTGLMDELDIIIVGGYWGKGSRGGMMSHFLCAVAEKPPSGKKPSVFHT 502
Query: 685 ICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPA-SI 743
+C++G+G++ L + L K+ +P+++ A P TE+PE P S+
Sbjct: 503 LCRVGSGYTMKELYD----LGLKLAKHWKPFHKKA---PPSSILCGTEKPEVYIEPCNSV 555
Query: 744 VYDSQITCLPSSYMPFSRSYFRFGR 768
+ + T + S M + RF R
Sbjct: 556 IVQIKATEIVPSDMYKTGCTLRFPR 580
>gi|300508449|pdb|3L2P|A Chain A, Human Dna Ligase Iii Recognizes Dna Ends By Dynamic
Switching Between Two Dna Bound States
Length = 579
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 139/280 (49%), Gaps = 20/280 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K V + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 226 PVQPMLAEACKSVEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 283
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D + K LPF TL K + D +
Sbjct: 284 VAHFKDYIPQAF----PGGHSMILDSEVLLIDNKTGKPLPFGTLGVH--KKAAFQD--AN 335
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ +
Sbjct: 336 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKALDLADMITRV 395
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV + AF+G+G +
Sbjct: 396 IQEGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 451
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
G+ FL+ CYD ++++ ++ K G +A L + L
Sbjct: 452 GMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATLARLQNEL 491
>gi|345004935|ref|YP_004807788.1| DNA ligase [halophilic archaeon DL31]
gi|344320561|gb|AEN05415.1| DNA ligase [halophilic archaeon DL31]
Length = 584
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 141/568 (24%), Positives = 245/568 (43%), Gaps = 79/568 (13%)
Query: 217 CNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACGR--TESHVK 274
+++ T+ E+L V ++ P + + IG + LA+A G T V+
Sbjct: 23 VSLVATLFSDAGEELPVVARFLQGRVFPGWDTRTIDIGPRLCYETLAKAAGTNVTADDVE 82
Query: 275 KQYQEMGDLGLVAKA-------SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKK 327
++ E G++G VA + + D T+ +V D R +A G S++ K
Sbjct: 83 QRLAEEGEIGAVAAGLDLGGQQGLGAFTAGGGDDGPTLAEVDDALREVAAADGAGSEDAK 142
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP 387
+ L + E +YL RL+ ++RIG+ E T+ A+ +A ++ + S
Sbjct: 143 LAALFGLFSRVSADEARYLARLVLGEMRIGVGEGTVRDAIAEA--FDVETS--------- 191
Query: 388 LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIV 447
+V V Y ++ +G L+ G P+ MLA+ V+ +
Sbjct: 192 ------LVSNALQVSNDYGRVAVLAQDEGAAGLAE-MGLETGRPVQAMLAQAGT-VTGAL 243
Query: 448 NKFQDMEFTCEYKYDGERAQIHYLEDG---------------SVEIYSRNAERNTGKFPD 492
+++ E E K+DG R Q+H+ DG +V +YSRN T P+
Sbjct: 244 EEWK--EAAAEIKFDGARVQLHHAPDGIAPPEADREPMADDPTVRLYSRNTSEVTAALPE 301
Query: 493 V-VLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK--VDVCI 549
+ A RL P+ +LD E+VA D E LPFQ + R R+ + ++ V + +
Sbjct: 302 IREYAEERLDAPA----ILDGEVVAVD-EDGAPLPFQEVLRRFRRKHDVDRMREEVKLSL 356
Query: 550 YAFDILYRN------------GQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD 597
+AFD L G LL R R L + + ++ S D +
Sbjct: 357 HAFDCLLDGRGDADDERGDEVGPDLLDASFRERHTRLSELLPDAASEARY-----SDDPE 411
Query: 598 EIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAF 657
EI+ F AA+ A EG+++K ++TY P R +WLK K D ++LD V A
Sbjct: 412 EIEAFEQAALAAGHEGIMLKRP--ESTYTPGDRGKDWLKRKPDV-----ETLDCVVTGAE 464
Query: 658 HGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYR 717
G G+R +G FLL+ D + E+ ++ K+ TG ++ L + ++ L V+ +
Sbjct: 465 WGEGRRANEFGTFLLSVRDGD--EYATVGKVATGITDEELADLTALLEPHVLKESGQTVT 522
Query: 718 FADTISPDVWFEPTERPETSNSPASIVY 745
F + +V +E + T +S ++ +
Sbjct: 523 FRPAVVFEVGYEEIQASPTYSSGYALRF 550
>gi|448414649|ref|ZP_21577662.1| ATP-dependent DNA ligase i [Halosarcina pallida JCM 14848]
gi|445681758|gb|ELZ34186.1| ATP-dependent DNA ligase i [Halosarcina pallida JCM 14848]
Length = 601
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 145/571 (25%), Positives = 255/571 (44%), Gaps = 62/571 (10%)
Query: 217 CNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKALAEACG--RTESHVK 274
++R + + ++L V ++ PA + L IG + +A+A A G T V+
Sbjct: 23 AALVRDLFRESGDELDTVARFVQGRVFPAWDSTTLDIGPRLLREAVARAAGPNVTADDVE 82
Query: 275 KQYQEMGDLGLVAKA---------SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQE 325
++ E G++G VA + D LT+ +V T R +A G S++
Sbjct: 83 ERLAEEGEIGAVAAGYDFGGQRGLAAFGGGDGGGGDGLTVREVDGTLRELAAATGSGSED 142
Query: 326 KKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNE--------QH 377
+K + + L A+ E ++L RL+ S++RIG+ E T+ A+ +A + E +
Sbjct: 143 RKLSALFGLFNRASPEEAKFLARLVLSEMRIGVGEGTVRDAIAEAFLVREADGPEDGEEE 202
Query: 378 SKPPPNIQSPLEEAAK----IVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIG 433
+ PL AA V++ V Y + +G+ L G P+
Sbjct: 203 DEDGDEDDGPLTRAAADHLAAVERALQVSNDYGMVAVTAREEGLEGL-EAVRLEVGRPVQ 261
Query: 434 PMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY---------LEDGSVEIYSRNAE 484
MLA+ ++ + ++ E E K+DG R Q+H +D SV ++SRN +
Sbjct: 262 AMLAQAGT-ATDALEEWG--EAAVERKFDGARVQLHADGEAGGKSDGDDISVSVFSRNMD 318
Query: 485 RNTGKFPDVV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
T P++ A + P +LD E+VA D + LPFQ + R R+ + +
Sbjct: 319 DVTDALPEIAEFAAEHVDAP----VILDGEVVAVDDDGSP-LPFQEVLRRFRRKHDVDRM 373
Query: 544 KVDVCI--YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
+ +V + +AFD L+ +G+ LL + R L + E+ + L S D EI
Sbjct: 374 REEVRLELHAFDCLHADGEDLLDAPVTERHARLAEILPEDA----VSDLLVSNDEGEIAA 429
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
F + ++ A EG+++K + D+TY P R NWLK K D +++DLV A G G
Sbjct: 430 FEEGSLAAGHEGIMLK--NPDSTYSPGDRGKNWLKRKPDV-----ETVDLVVTGAEWGEG 482
Query: 662 KRTGVYGAFLLACY-------DSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRP 714
+R G FLL+ N + + +I K+ TG ++ L E S L +++ +
Sbjct: 483 RRANHLGTFLLSARTDEGSDGQGNGDGYATIGKVATGITDEELAELSELLEPEIVAEDGQ 542
Query: 715 YYRFADTISPDVWFEPTERPETSNSPASIVY 745
++ +V +E +R T +S ++ +
Sbjct: 543 TVELNPSVVFEVGYEEIQRSPTYSSGYALRF 573
>gi|380474606|emb|CCF45685.1| DNA ligase, partial [Colletotrichum higginsianum]
Length = 402
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 107/186 (57%), Gaps = 15/186 (8%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W++GE VP+ L F +I T R+ I LR V+ TP+DL+P V L NK+AP
Sbjct: 212 WKQGEPVPYAALCTTFSLIELTTKRLEIMAHCSLFLRQVLRLTPDDLLPTVLLMINKLAP 271
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
+ G+ELGIG++ I+KA+ E GR+ + +K+ +E+GDLGLVA SRS+Q M KP PLT
Sbjct: 272 DYAGIELGIGESLIMKAIGETTGRSLAVIKQDQKEIGDLGLVAVKSRSTQPTMFKPKPLT 331
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATD---------------CEPQYLIRL 349
I+ V IA +G +Q +K + IK LL AA E +YL+R
Sbjct: 332 ISGVHKGLMGIATVSGNGAQGRKVDAIKKLLSAADSHSSGKVDISKDKGGPSEAKYLVRF 391
Query: 350 LQSKLR 355
L+ KLR
Sbjct: 392 LEGKLR 397
>gi|47506906|gb|AAH70993.1| LOC398275 protein [Xenopus laevis]
Length = 933
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 185/415 (44%), Gaps = 43/415 (10%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V D ++K +E ++N ++ + T + + +IRL++ L++ +
Sbjct: 282 LTIHEVDDLLTRLSKMT---KEEDQQNVLEDIARRCTSNDLKCIIRLVKHDLKMNSGAKH 338
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL PN + + + V VL E+ P + LS
Sbjct: 339 VLDALD-------------PNAYDAFKASRNLGDVVERVLR-NEQQAPGMKR----TLSV 380
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
S P+ PMLA+ K + + K + + E KYDGER Q+H D +SR+
Sbjct: 381 QASLM--TPVQPMLAEACKSIEYAMKKCPNGMYA-EIKYDGERVQVHKNGD-HFSYFSRS 436
Query: 483 AE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+ F D + P S +LD E++ D K LPF TL K
Sbjct: 437 LKPVLPHKVAHFKDFIPKAF----PGGNSMILDAEVLLIDTNTGKPLPFGTLGVH--KKA 490
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
+ D VC++ FD +Y NG L+ L RR+ + ++ E P F+ +
Sbjct: 491 AFKD--ASVCLFVFDCIYFNGVSLMDRPLNERRKFMRENMVEIPNHIMFSEMKHVTKAAD 548
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAA 656
+ + + EGL++K D + YEP KR +WLK+KKDY+ ++ D+ DL + A
Sbjct: 549 LADMITRVIREGLEGLVLK--DIKSNYEPGKR--HWLKVKKDYLNEGAMADTADLAVLGA 604
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
++G+G G+ FL+ CYD + + ++ K +G+ +A L+ L I K
Sbjct: 605 YYGKGANGGIMSIFLMGCYDPEGQHWCTVTKCSSGYDDATLQRLQKELNMVKISK 659
>gi|403283357|ref|XP_003933089.1| PREDICTED: DNA ligase 3 isoform 1 [Saimiri boliviensis boliviensis]
Length = 1013
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 191/404 (47%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E + ++V P + + +L+T
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKKPGQRRALSVQASLMT----- 479
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 480 -----------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 526
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P +S +LD E++ D + K LPF TL
Sbjct: 527 SRSLKPVLPHKVVHFKDYIPQAF----PGGQSMILDSEVLLIDNKTGKPLPFGTLGVH-- 580
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+++ E P F+
Sbjct: 581 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHENMVEIPNRIMFSEMKRVTK 638
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 639 ASDLADMITRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 694
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 695 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 738
>gi|296202009|ref|XP_002748408.1| PREDICTED: DNA ligase 3 isoform 2 [Callithrix jacchus]
Length = 954
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 191/404 (47%), Gaps = 46/404 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V + ++K +D Q++ I + A + + +IRL++ L++ +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTAN---DLKCIIRLIKHDLKMNSGAKH 428
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDGVWN 419
+L AL A + S+ N+Q +E + ++V P + + +L+T
Sbjct: 429 VLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKKPGQRRALSVQASLMT----- 479
Query: 420 LSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIY 479
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +
Sbjct: 480 -----------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYF 526
Query: 480 SRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
SR+ + F D + P +S +LD E++ D + K LPF TL
Sbjct: 527 SRSLKPVLPHKVVHFKDYIPQAF----PGGQSMILDSEVLLIDNKTGKPLPFGTLGVH-- 580
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
K + D +VC++ FD +Y N L+ L RR+ L+++ E P F+
Sbjct: 581 KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHENMVEIPNRIMFSEMKRVTK 638
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVP 653
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ DLV
Sbjct: 639 ASDLADMITRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVV 694
Query: 654 IAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
+ AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 695 LGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 738
>gi|290973973|ref|XP_002669721.1| predicted protein [Naegleria gruberi]
gi|284083272|gb|EFC36977.1| predicted protein [Naegleria gruberi]
Length = 1260
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 148/285 (51%), Gaps = 16/285 (5%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHY-LEDGSVEIYSRN-AERNTG 488
P+ PMLA+P+K +++ + + F E KYDGER QIHY ++ ++ +SRN +
Sbjct: 337 PVKPMLARPSKTYDDVIARCPN-GFYSELKYDGERIQIHYDRKNDEIKYFSRNLKDVQEY 395
Query: 489 KFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVC 548
K V +S+ K V S +LD EI+ D + KILPF TL KNV
Sbjct: 396 KIKSVKKYISKAIKEKVESVILDGEILMMDTKTNKILPFGTLG----KNVRQDHKDAVTT 451
Query: 549 IYAFDILYRNGQPLLQEQLRVRRE---HLYDSFEEEPGFFQFATTLTSIDLDE--IQKFL 603
I+ FDILY NG+ LL L R+ + + + ++ S E + +
Sbjct: 452 IFLFDILYYNGKSLLSVPLYKRKALMTKIVNPIKHRVMLGEYLVVKGSKQTREAIVSAEM 511
Query: 604 DAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
A + EGL++K D + YEP+ R +WLK+KKDY++ + DS+DLV + A+ G G +
Sbjct: 512 SAMIKKGEEGLVLK--DLCSPYEPNAR--HWLKMKKDYLKGMADSVDLVVLGAYLGTGSK 567
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
G+ F++ +D +++ ICK G G + +E + L+S +
Sbjct: 568 GGLMSVFMMGSFDKKLGKWRIICKCGNGHDDQTIETLNEELKSNM 612
>gi|403283359|ref|XP_003933090.1| PREDICTED: DNA ligase 3 isoform 2 [Saimiri boliviensis boliviensis]
Length = 954
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 193/407 (47%), Gaps = 52/407 (12%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDC---EPQYLIRLLQSKLRIGLA 359
LTI +V + ++K +D Q++ AL A+ C + + +IRL++ L++
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQ------ALQDIASRCTANDLKCIIRLIKHDLKMNSG 425
Query: 360 EQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEK---IVPALLTDG 416
+ +L AL A + S+ N+Q +E + ++V P + + +L+T
Sbjct: 426 AKHVLDALDPNAYEAFKASR---NLQDVVERVLRNEQEV-EKKPGQRRALSVQASLMT-- 479
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
P+ PMLA+ K + + K + F+ E KYDGER Q+H D
Sbjct: 480 --------------PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HF 523
Query: 477 EIYSRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLST 532
+SR+ + F D + P +S +LD E++ D + K LPF TL
Sbjct: 524 SYFSRSLKPVLPHKVVHFKDYIPQAF----PGGQSMILDSEVLLIDNKTGKPLPFGTLGV 579
Query: 533 RARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLT 592
K + D +VC++ FD +Y N L+ L RR+ L+++ E P F+
Sbjct: 580 H--KKAAFQD--ANVCLFVFDCIYFNDVSLMDRPLCERRKFLHENMVEIPNRIMFSEMKR 635
Query: 593 SIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLD 650
++ + + EGL++K D TYEP KR +WLK+KKDY+ ++ D+ D
Sbjct: 636 VTKASDLADMITRVIREGLEGLVLK--DVKGTYEPGKR--HWLKVKKDYLNEGAMADTAD 691
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAML 697
LV + AF+G+G + G+ FL+ CYD ++++ ++ K G +A L
Sbjct: 692 LVVLGAFYGQGSKGGMMSIFLMGCYDPGSQKWCTVTKCAGGHDDATL 738
>gi|379642981|ref|NP_001243858.1| DNA ligase 4 [Equus caballus]
Length = 911
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 218/479 (45%), Gaps = 54/479 (11%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V D +A ++ K + L+ ++ E ++LIR++ L++G++EQT
Sbjct: 143 LTIQQVNDILDSVASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIVKDLKLGVSEQT 202
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+ +A A E H N+ + LE K+ +Q L D + LS+
Sbjct: 203 VFSAFHNDAA--ELH-----NVTTDLE---KVCRQ---------------LHDPLIGLSD 237
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV-EIYSR 481
S T PMLA + I + F E K DGER Q+H + G V + +SR
Sbjct: 238 I-SITLFSAFKPMLA-AIANIERIEKDMKHQSFYIETKLDGERMQMH--KHGDVYQYFSR 293
Query: 482 NAERNTGKFPD------VVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRAR 535
N T +F D + + +P ++ +LD E++AY+ Q + + +
Sbjct: 294 NGYDYTDQFGDSPQEGSLTPFIHNAFQPDIQICILDGEMMAYNPNTQTFMQ-KGNKFDIK 352
Query: 536 KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
+ V SD++ C+ FD+L N + L +E LR R E L F PG + + +
Sbjct: 353 RMVEDSDLQTCYCV--FDVLMVNNKKLGRETLRKRCEILSSIFMPIPGRIEIVQKMQAHT 410
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
E+ L+ A+D EG++IK + Y+P KR WLK+K +Y+ + D LD++ +
Sbjct: 411 KQEVIDALNEAIDKREEGIMIK--HPLSIYKPDKRGEGWLKIKPEYVNGLTDELDILIVG 468
Query: 656 AFHGRGKRTGVYGAFLLACYD-----SNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP 710
+ G+G R G+ FL A + F ++C++G+G++ L + L K+
Sbjct: 469 GYWGKGSRGGMMSHFLCAVAEKPPAGEKPSVFHTLCRVGSGYTMKELYD----LGLKLAQ 524
Query: 711 KPRPYYRFADTISPDVWFEPTERPETSNSPA-SIVYDSQITCLPSSYMPFSRSYFRFGR 768
+P+++ A P E+PE P S++ + T + SS M + RF R
Sbjct: 525 HWKPFHKKA---PPSSILCGIEKPEVYIEPCNSVIVQIKATEIVSSDMYKTGCTLRFPR 580
>gi|328872844|gb|EGG21211.1| BRCT domain-containing protein [Dictyostelium fasciculatum]
Length = 1087
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 146/285 (51%), Gaps = 20/285 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGK 489
PI PML K K V EI+ + M F E KYDGER QIH +DG + + YSRN +
Sbjct: 260 PIKPMLPKAVKSVDEIIKQCSSM-FYAEIKYDGERIQIH--KDGKNFKFYSRNLKP---I 313
Query: 490 FPDVVLAVSRL--KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV 547
P V+ V K S +LD EI+ D + K LPF TL ++ S V
Sbjct: 314 MPWKVVDVQEFIPKATKADSIILDGEILLMDTKTSKPLPFGTLGVHKKQGFS----DATV 369
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFA-TTLTSIDLDE--IQKFLD 604
C++ FDILY NG+ L+ + RRE L + + + TT+ D+ + K L
Sbjct: 370 CVFLFDILYLNGESLINLPMHKRREILEKNVNVVKHRIELSETTMVKGKEDKSTLSKLLG 429
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A+ EGL+IK D + YEP R +W+K+KKDY+ + DS DL+ I ++G G
Sbjct: 430 RAIKEKLEGLVIK--DSTSVYEPGCR--HWIKIKKDYLHGMADSADLLAIGGYYGTGSSG 485
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
G+ FL+ YD + ++++CK+ G + +E+ ++ +I
Sbjct: 486 GLVTVFLMCVYDKDANNYKTVCKVSGGLDDKAIEKLQPKVKKDMI 530
>gi|110668253|ref|YP_658064.1| DNA ligase (ATP) [Haloquadratum walsbyi DSM 16790]
gi|121687277|sp|Q18HT7.1|DNLI1_HALWD RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|109626000|emb|CAJ52448.1| DNA ligase (ATP) [Haloquadratum walsbyi DSM 16790]
Length = 618
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 134/538 (24%), Positives = 229/538 (42%), Gaps = 82/538 (15%)
Query: 215 IVCNMLRTVMETTPEDLVPV-VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHV 273
++ + V + T L+PV V L ++ E E+G+ A A+++A G +
Sbjct: 25 LLADCFLDVYDNTETSLLPVTVRLVRGRVFARWEAAEIGVSTAGAADAISKATGVESEQI 84
Query: 274 KKQYQEMGDLGLVAKAS---RSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNR 330
+ ++E GDLG A + R Q++ PLT+T+V++T R +A G SQ+K+++
Sbjct: 85 ETWWREEGDLGDAAAYAVDDRVQQTLT--ATPLTVTRVYETLREVASYEGSGSQQKQRDE 142
Query: 331 IKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEE 390
I L+ A+ +Y++R + +R+G+ E + AL A + + L
Sbjct: 143 IAGLISDASPLAARYIVRTVTGSMRLGVGEGIVRNALASAFLDMSDDAADAVQRAIDLTN 202
Query: 391 AAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKF 450
+V Q V E+ P L + PI PMLAK + + V++
Sbjct: 203 DVAVVAQ-----RVAEQGQPGL---------DDVDLELFRPIKPMLAKQAESIQTAVDEL 248
Query: 451 ----------QDMEFT------CEYKYDGERAQIHYLEDG-SVEIYSRNAERNTGKFPDV 493
++E + E+KYDG RA+IH DG + +Y+R T +FPDV
Sbjct: 249 AADPKHIERNHNIELSHSGAVLIEFKYDGIRAKIH--RDGDDIRVYTRRLSDVTEQFPDV 306
Query: 494 VLAVSRLKKPSVRSFVLDCEIVAYDREKQKILP--FQTLSTRARKNVSLSDI--KVDVCI 549
V A + ++++ E+V YD + P FQTL+ R ++ +++ I + V
Sbjct: 307 VSAAR--DHIDAKHYIIEAELVGYDPQSNDDTPVTFQTLAQRIQRTDNVATIAKSIPVTT 364
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEP--------------------------- 582
Y FD+L NG+ LL + L +R E L +
Sbjct: 365 YVFDLLALNGESLLTDTLEMRLERLNTILSTKATSDSKSASTHNAHSSTSVTTVSSDQYQ 424
Query: 583 --GFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKD 640
+ A + +F + A+ A EG++IK R Y+P R K+K
Sbjct: 425 SSSSLRRAQCTWATTQTTAAEFYEDALAAGHEGVMIKNPAR--PYQPGSRVGYQRKIKPT 482
Query: 641 YIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
+ LDLV A G+++ G LAC ++ + ++ TGF++ LE
Sbjct: 483 M-----EPLDLVVTRAKWSEGRKSDFLGRPYLACRTADG-NLAEVGRMHTGFTDDQLE 534
>gi|383847368|ref|XP_003699326.1| PREDICTED: DNA ligase 3 [Megachile rotundata]
Length = 979
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 173/380 (45%), Gaps = 34/380 (8%)
Query: 324 QEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPN 383
+E + N K+++ T + + +IRL++ LRI + +L+A+ + A Q S+ +
Sbjct: 360 EEDQINHFKSIISRCTTNDLKMIIRLIKHDLRINAGPKHVLSAIHEQAYEAFQVSR---D 416
Query: 384 IQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGV 443
+ S +E FS P K+ + + + P+ PMLA+ K V
Sbjct: 417 LDSVVER--------FSQAPSGSKLGKVSSGS---SGGGKVALSLMTPVLPMLAEACKSV 465
Query: 444 SEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RNTGKFPDVVLAVSR 499
E+ K E KYDGER Q+H +SR+ + F D +
Sbjct: 466 -EMAMKKCSSGMLSEVKYDGERVQVHK-RGNEFRYFSRSLKPVLPHKVNHFKDYIPKAF- 522
Query: 500 LKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNG 559
P +LD E++ D + LPF TL K D +VC++ FD +Y NG
Sbjct: 523 ---PDGDDLILDAEVLMIDTNTGQPLPFGTLGIH--KKAEFKD--ANVCLFVFDCIYYNG 575
Query: 560 QPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTM 619
LL + + RR+ L + E P + ++ K + + EGL++K
Sbjct: 576 DVLLHKSMMERRKILEERMTEIPNRIMLSEVQEVRRPQDLAKMIAKVLSMGLEGLVLK-- 633
Query: 620 DRDATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDS 677
D YEP KR +WLK+KKDY+ ++ D+ DLV + A++G G R G+ FL+ CYD
Sbjct: 634 DVTGKYEPGKR--HWLKVKKDYLFDGAMADTADLVVLGAWYGTGNRGGMMSIFLMGCYDE 691
Query: 678 NNEEFQSICKIGTGFSEAML 697
+ + ++ K+ TG +A L
Sbjct: 692 DQGNWVTVTKVHTGHDDATL 711
>gi|344285688|ref|XP_003414592.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3-like [Loxodonta
africana]
Length = 1014
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 20/280 (7%)
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RN 486
P+ PMLA+ K + + K + F+ E KYDGER Q+H D +SR+ +
Sbjct: 480 PVQPMLAEACKSIEYAMKKCPNGMFS-EIKYDGERVQVHKNGD-HFSYFSRSLKPVLPHK 537
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
F D + P S +LD E++ D K LPF TL + + +
Sbjct: 538 VAHFKDYIPQAF----PGGHSMILDSEVLLIDTSTGKPLPFGTLGVHKKAAFQ----EAN 589
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++ FD +Y N L+ L RR+ L+D+ E P F+ ++ ++
Sbjct: 590 VCLFVFDCIYFNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVKKASDLVDMINRV 649
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRT 664
+ EGL++K D +TYEP KR +WLK+KKDY+ ++ D+ DL+ + AF+G+G +
Sbjct: 650 IREGLEGLVLK--DVKSTYEPGKR--HWLKVKKDYLNEGAMADTADLLVLGAFYGQGSKG 705
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
G+ FL+ CYD ++++ ++ K G +A L + L
Sbjct: 706 GMMSIFLMGCYDPGSQKWCTVTKCSGGHDDATLARLQTEL 745
>gi|198417566|ref|XP_002129234.1| PREDICTED: Zn-finger (NAD(+) ADP-ribosyltransferase)-2 [Ciona
intestinalis]
Length = 854
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 192/423 (45%), Gaps = 54/423 (12%)
Query: 299 KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGL 358
K LTI V D ++K +E + +K L +T + + +IRL++ L+I
Sbjct: 265 KKSTLTIHDVDDFLENLSKLT---REEDQLELLKKLAKRSTGNDLRTVIRLIKCDLKITA 321
Query: 359 AEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
+ +L AL A + S+ ++ +EE K + V +L+T
Sbjct: 322 GPKHILDALDSNAHEAFKASRDLKDVLDRIEENKKSGSKKLEVRA-------SLMT---- 370
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
P+ PMLA+ K V + + K + ++ E KYDGER Q+H ++ +
Sbjct: 371 ------------PVSPMLAEACKSVEQAMKKCPNGMYS-EIKYDGERVQLH-MKGKDFQF 416
Query: 479 YSRN----AERNTGKF----PDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
YSR+ ++ F PD P S +LD E++ D + LPF TL
Sbjct: 417 YSRSLKPVSDHKIMHFEKYIPDAF--------PDGHSMILDSEVLLVDVKTGNPLPFGTL 468
Query: 531 STRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
+ +VC++ FDIL NG+ L+ + ++ RR L S + P +
Sbjct: 469 GIHKKSKFQ----DANVCLFIFDILQFNGENLMGKSMKERRTILETSMKVIPNRVMLSEL 524
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYI--ESIGDS 648
D+++ + + EGL++K D YEP KR +WLK+KKDY+ + D+
Sbjct: 525 KFVNKPDDLKHMIVRVIKEGLEGLVLK--DIKGVYEPGKR--HWLKVKKDYLMQGQMADT 580
Query: 649 LDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
DLV + A++G G + G+ FL+ YD E + ++ K+G G + LE+ + L+ +
Sbjct: 581 ADLVVLGAYYGTGSKGGMMSVFLMGVYDEKRERWCTVTKVGNGHDDETLEKINKQLKVEK 640
Query: 709 IPK 711
I K
Sbjct: 641 ISK 643
>gi|93003248|tpd|FAA00207.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 859
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 192/423 (45%), Gaps = 54/423 (12%)
Query: 299 KPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGL 358
K LTI V D ++K +E + +K L +T + + +IRL++ L+I
Sbjct: 270 KKSTLTIHDVDDFLENLSKLT---REEDQLELLKKLAKRSTGNDLRTVIRLIKCDLKITA 326
Query: 359 AEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
+ +L AL A + S+ ++ +EE K + V +L+T
Sbjct: 327 GPKHILDALDSNAHEAFKASRDLKDVLDRIEENKKSGSKKLEVRA-------SLMT---- 375
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
P+ PMLA+ K V + + K + ++ E KYDGER Q+H ++ +
Sbjct: 376 ------------PVSPMLAEACKSVEQAMKKCPNGMYS-EIKYDGERVQLH-MKGKDFQF 421
Query: 479 YSRN----AERNTGKF----PDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTL 530
YSR+ ++ F PD P S +LD E++ D + LPF TL
Sbjct: 422 YSRSLKPVSDHKIMHFEKYIPDAF--------PDGHSMILDSEVLLVDVKTGNPLPFGTL 473
Query: 531 STRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
+ +VC++ FDIL NG+ L+ + ++ RR L S + P +
Sbjct: 474 GIHKKSKFQ----DANVCLFIFDILQFNGENLMGKSMKERRTILETSMKVIPNRVMLSEL 529
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYI--ESIGDS 648
D+++ + + EGL++K D YEP KR +WLK+KKDY+ + D+
Sbjct: 530 KFVNKPDDLKHMIVRVIKEGLEGLVLK--DIKGVYEPGKR--HWLKVKKDYLMQGQMADT 585
Query: 649 LDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV 708
DLV + A++G G + G+ FL+ YD E + ++ K+G G + LE+ + L+ +
Sbjct: 586 ADLVVLGAYYGTGSKGGMMSVFLMGVYDEKRERWCTVTKVGNGHDDETLEKINKQLKVEK 645
Query: 709 IPK 711
I K
Sbjct: 646 ISK 648
>gi|147901021|ref|NP_001082183.1| ligase III, DNA, ATP-dependent [Xenopus laevis]
gi|18029882|gb|AAL56552.1|AF393654_1 DNA ligase III isoform alpha [Xenopus laevis]
Length = 988
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 186/415 (44%), Gaps = 43/415 (10%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LTI +V D L+ + + +E ++N ++ + T + + +IRL++ L++ +
Sbjct: 337 LTIHEVDD---LLTRLSKMTKEEDQQNVLEDIARRCTSNDLKCIIRLVKHDLKMNSGAKH 393
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL PN + + + V VL E+ P + LS
Sbjct: 394 VLDALD-------------PNAYDAFKASRNLGDVVERVLR-NEQQAPGMKR----TLSV 435
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
S P+ PMLA+ K + + K + + E KYDGER Q+H D +SR+
Sbjct: 436 QASLM--TPVQPMLAEACKSIEYAMKKCPNGMYA-EIKYDGERVQVHKNGD-HFSYFSRS 491
Query: 483 AE----RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+ F D + P S +LD E++ D K LPF TL K
Sbjct: 492 LKPVLPHKVAHFKDFIPKAF----PGGNSMILDAEVLLIDTNTGKPLPFGTLG--VHKKA 545
Query: 539 SLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDE 598
+ D VC++ FD +Y NG L+ L RR+ + ++ E P F+ +
Sbjct: 546 AFKD--ASVCLFVFDCIYFNGVSLMDRPLNERRKFMRENMVEIPNHIMFSEMKHVTKAAD 603
Query: 599 IQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPIAA 656
+ + + EGL++K D + YEP KR +WLK+KKDY+ ++ D+ DL + A
Sbjct: 604 LADMITRVIREGLEGLVLK--DIKSNYEPGKR--HWLKVKKDYLNEGAMADTADLAVLGA 659
Query: 657 FHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPK 711
++G+G G+ FL+ CYD + + ++ K +G+ +A L+ L I K
Sbjct: 660 YYGKGANGGIMSIFLMGCYDPEGQLWCTVTKCSSGYDDATLQRLQKELNMVKISK 714
>gi|260841228|ref|XP_002613830.1| hypothetical protein BRAFLDRAFT_119901 [Branchiostoma floridae]
gi|229299220|gb|EEN69839.1| hypothetical protein BRAFLDRAFT_119901 [Branchiostoma floridae]
Length = 928
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 212/471 (45%), Gaps = 55/471 (11%)
Query: 279 EMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLV 336
E+GD+ + S + + K LTI +V ++ ++A+ +D Q ++ N+I A
Sbjct: 259 ELGDVSETVRKFFEESERCLPAKKSKLTIQEVDESLEILAQMTKEDDQMRELNKI-AKKC 317
Query: 337 AATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVK 396
A D + ++RL++ LRI + +L L A Q S+
Sbjct: 318 TANDL--KVVVRLIKHDLRINAGAKHILEGLDPNAYPAFQASR----------------- 358
Query: 397 QVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI--PIGPMLAKPTKGVSEIVNKFQDME 454
++ V E++V G + + S + P+ PMLA+ K V + K +
Sbjct: 359 ---NLADVVERVVANGCAPG---MKKSLSIKANLMTPVLPMLAEACKSVEMAMRKCPNGM 412
Query: 455 FTCEYKYDGERAQIHYLEDGSVEIYSRNAE----RNTGKFPDVVLAVSRLKKPSVRSFVL 510
+ E KYDGER Q+H + E +SR+ + F D + P + +L
Sbjct: 413 YA-EIKYDGERVQVHK-QGNKFEYFSRSLKPVLPHKVAHFKDYIPKAF----PHGSNMIL 466
Query: 511 DCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
D E++ D LPF TL ++ S V ++ FD +Y NG+ L+ + R
Sbjct: 467 DSEVLLVDTNTGNPLPFGTLGIHKKQQFS----DAQVALFVFDCIYFNGETLMDRPISER 522
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKR 630
R+ L D+ P + + ++ + + EGL++K D + YEP KR
Sbjct: 523 RKFLEDNMTVIPNRVVLSEYRYITEPGDLSDMIGRVIRDGLEGLVLK--DTKSIYEPGKR 580
Query: 631 SLNWLKLKKDYIE--SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKI 688
+WLK+KKDY+E ++ D+ DLV + AF+G G + G+ FL+ YD +++++ ++ K
Sbjct: 581 --HWLKVKKDYLEQGAMADTADLVVLGAFYGTGNKGGLKSVFLMGVYDPDSDKWCTVTKC 638
Query: 689 GTGFSEAMLEERSSSLR----SKVIPKPRPYYRFADTISPD-VWFEPTERP 734
G G + + + + L SK + K + + + PD V +P + P
Sbjct: 639 GNGHDDNTIAKLNKELAMVKISKDMSKVPKWLKITKNLVPDFVCADPKKAP 689
>gi|110761354|ref|XP_396537.3| PREDICTED: DNA ligase 3 [Apis mellifera]
Length = 1009
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 201/438 (45%), Gaps = 58/438 (13%)
Query: 276 QYQEMGDLGLVAKASRS--SQSMMRKP---DPLTITKV---FDTFRLIAKEAGKDSQEKK 327
++ E GD VA+ RS +S RKP LTI +V L+ KE E++
Sbjct: 258 EHLERGD---VAETIRSFFERSAARKPAENSVLTIQQVDEFLQELSLLTKE------EEQ 308
Query: 328 KNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSP 387
+ +++ T + + +IRL++ LRI + +LAA+ + A
Sbjct: 309 ISHFCSIVSRCTLDDLKMIIRLIKHDLRINAGPKHVLAAVHEDAY--------------- 353
Query: 388 LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIV 447
EA + + + SV+ + + + S+ T P+ PMLA+ K V +
Sbjct: 354 --EAFQTSRDLNSVIERCLQRSKKSKSKKQESNSSNVEITLMTPVLPMLAEACKSVEMAM 411
Query: 448 NKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKK----- 502
K + E KYDGER Q+H + +SR+ + P + V+ K
Sbjct: 412 KKCPNG-MLAEVKYDGERVQVHK-KGNEFRYFSRSLK------PVLSHKVNLFKNYIPQA 463
Query: 503 -PSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQP 561
P +LD EI+ D K LPF +L K D + C++ FD +Y NG
Sbjct: 464 FPDGDDLILDSEILMIDTNTGKPLPFGSLGIH--KKAEFKD--ANACLFVFDCIYYNGHV 519
Query: 562 LLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDR 621
LL + + RR+ L + E P + T + ++ K + ++ EGL++K D
Sbjct: 520 LLHKSMIERRQILTERMSEIPNRIMLSETEEIYNSQDLAKMIAKILNMGLEGLVLK--DI 577
Query: 622 DATYEPSKRSLNWLKLKKDYI--ESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNN 679
+ YEP KR +WLK+KKDY+ ++ DS DLV + A++G G + G+ FL+ CYD +
Sbjct: 578 HSKYEPGKR--HWLKVKKDYLYDGAMADSADLVVLGAWYGTGNKGGMMSVFLMGCYDEDR 635
Query: 680 EEFQSICKIGTGFSEAML 697
+ + ++ K+ TG +A L
Sbjct: 636 DNWVTVTKVHTGHDDATL 653
>gi|196007104|ref|XP_002113418.1| hypothetical protein TRIADDRAFT_57566 [Trichoplax adhaerens]
gi|190583822|gb|EDV23892.1| hypothetical protein TRIADDRAFT_57566 [Trichoplax adhaerens]
Length = 823
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 191/410 (46%), Gaps = 45/410 (10%)
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LT+ +V D ++ +D Q K +K + T + +Y+IRL++ LRI +
Sbjct: 245 LTMQEVDDLLDELSNVTKEDMQLK---VLKKIARRCTTEDLRYIIRLIKHDLRINAGSRH 301
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL + A +A+ ++ V + DG L
Sbjct: 302 ILDALDKNA--------------HAAYQASSDLRDVVDRCLARKTDRNNDDDDGAPKLKR 347
Query: 423 TCSFTPGI--PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIY 479
S + P+ PMLA+ K ++ + K F E KYDGER QIH ++G E Y
Sbjct: 348 DLSIRASLMTPVRPMLAEACKSINTAIKKCPKGMFA-EIKYDGERVQIH--KNGQQFEYY 404
Query: 480 SRNAERNTGKFPDVVLAVSRL---KKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
SR+ ++ P V + + P S +LD E++ D+ K LPF TL ++
Sbjct: 405 SRSLKQ---VMPHKVKDIKQYLPQACPHGNSIILDSEVLLVDKT-GKPLPFGTLGVHKKQ 460
Query: 537 NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDL 596
N S VC++ FD L+ NG+ L+Q R+ L + +E PG +
Sbjct: 461 NFS----DATVCLFIFDCLHFNGKDLMQT-----RKILESNVQEIPGRIMLSEKKLVQKE 511
Query: 597 DEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIE--SIGDSLDLVPI 654
+E+ + + EGL++K D ++ YEP KR +WLK+KKDY+ S+ DS DLV +
Sbjct: 512 NELTGLVSRVIREGLEGLVLK--DVESVYEPGKR--HWLKIKKDYLAEGSMADSADLVVL 567
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
A++G G + GV FL+ YD + ++++ K G G + L++ + L
Sbjct: 568 GAYYGTGNKGGVMSVFLMGTYDERSGRWRTVAKCGNGHDDKTLDKINKEL 617
>gi|224043062|ref|XP_002198469.1| PREDICTED: DNA ligase 4 [Taeniopygia guttata]
Length = 911
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 223/485 (45%), Gaps = 59/485 (12%)
Query: 279 EMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAA 338
+ GD ++A +S K LTI +V + IA ++ + K + L+ +
Sbjct: 125 DAGDFAMIAYFVLKPRS--PKQGRLTIEQVNEHLDAIANNNAAKNKGQLKKSLLQLITQS 182
Query: 339 TDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQV 398
T E ++LIR++ L++G+++QT+ + AV E H N+ + LE K+ +Q
Sbjct: 183 TALEQKWLIRMIIKDLKLGVSQQTIFSVFHPDAV--ELH-----NVTTDLE---KVCRQ- 231
Query: 399 FSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
L D +LS+ S PMLA V +I + + F E
Sbjct: 232 --------------LHDPSVSLSDV-SIMLFSAFKPMLA-AIADVQQIEKQMSNQTFYIE 275
Query: 459 YKYDGERAQIHYLEDGSV-EIYSRNAERNTGKFPDVVLA------VSRLKKPSVRSFVLD 511
K DGER Q+H +DG V + +SRN T +F L + + K ++++ +LD
Sbjct: 276 TKLDGERMQMH--KDGDVYKYFSRNGFDYTQQFGASPLEGSLTPFIHNVFKSNIQNCILD 333
Query: 512 CEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 571
E++AY+ E Q + + ++ V SD++ C+ FD+L N Q L E L R
Sbjct: 334 GEMMAYNPEAQSFMQ-KGNKFDIKRMVEDSDLQTCFCV--FDVLMVNDQKLGHEVLSKRY 390
Query: 572 EHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRS 631
E L F G ++ E+ L+ A+D EG+++K D +TY+P KR
Sbjct: 391 EILSSVFTPVKGRIHVVHKRSARTRKEVIDALNEAIDNREEGIMVK--DPMSTYKPDKRG 448
Query: 632 LNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDS--NNEE---FQSIC 686
WLK+K +Y+ + D LDL+ + + G+G R G+ FL A ++ NE+ F SIC
Sbjct: 449 EGWLKIKPEYVNGLMDELDLLIVGGYWGKGSRGGMMSHFLCAVAETPPPNEKPTIFHSIC 508
Query: 687 KIGTGFSEAMLEERSSSLRSKVIPKPRPYYR-------FADTISPDVWFEPTERPETSNS 739
++G+G++ L + L K+ +PY+R P+++ EP
Sbjct: 509 RVGSGYTMKELYD----LGLKLAKHWKPYHRKDPPGNILCGAEKPEMYIEPCNSVIVQIK 564
Query: 740 PASIV 744
A IV
Sbjct: 565 AAEIV 569
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,795,591,958
Number of Sequences: 23463169
Number of extensions: 504334538
Number of successful extensions: 1957076
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1398
Number of HSP's successfully gapped in prelim test: 2831
Number of HSP's that attempted gapping in prelim test: 1936655
Number of HSP's gapped (non-prelim): 13165
length of query: 768
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 617
effective length of database: 8,816,256,848
effective search space: 5439630475216
effective search space used: 5439630475216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)