BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004212
(768 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q42572|DNLI1_ARATH DNA ligase 1 OS=Arabidopsis thaliana GN=LIG1 PE=2 SV=2
Length = 790
Score = 1002 bits (2590), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/749 (66%), Positives = 599/749 (79%), Gaps = 29/749 (3%)
Query: 2 LLTLRSCYPLRLTPLSGNVVKPTSFSR--LSFSSH--HLFQKPKPLSSSLNPRRKMSSSA 57
+L +RS LR P + + FS +SFS HL LSS R MSSS
Sbjct: 1 MLAIRSSNYLRCIPSLCTKTQISQFSSVLISFSRQISHL-----RLSSC---HRAMSSSR 52
Query: 58 PNAFQVLMS---AAAKKKPSPQPNSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEE 114
P+AF LMS AAAKKK P +++ S SP KR+ +TQ ++V E E
Sbjct: 53 PSAFDALMSNARAAAKKK---TPQTTNLSRSPNKRKIGETQDANLGKTIVSEGTLPKTE- 108
Query: 115 PSNDLVKPISNQIDNPIDSEKESQPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKKA 174
DL++P+S+ + D+ ++ + KK K K E+KS I LLKKK
Sbjct: 109 ---DLLEPVSDSANPRSDTSSIAEDSKTGAKKAKT-------LSKTDEMKSKIGLLKKKP 158
Query: 175 GEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
+FDP+ ++CWEKGERVPF+F++L FD+ISNE+GRI+ITDI+CNMLRTV+ TTPEDLV
Sbjct: 159 NDFDPEKMSCWEKGERVPFLFVALAFDLISNESGRIVITDILCNMLRTVIATTPEDLVAT 218
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
VYL+AN+IAPAHEG+ELGIG+++IIKA++EA GRTE HVKKQ E+GDLGLVAK SRS+Q
Sbjct: 219 VYLSANEIAPAHEGVELGIGESTIIKAISEAFGRTEDHVKKQNTELGDLGLVAKGSRSTQ 278
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
+MM KP+PLT+ KVFDTFR IAKE+GKDS EKKKNR+KALLVA TDCEP YL RLLQ+KL
Sbjct: 279 TMMFKPEPLTVVKVFDTFRQIAKESGKDSNEKKKNRMKALLVATTDCEPLYLTRLLQAKL 338
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
R+G + QT+LAALGQAAVYNE+HSKPPPN +SPLEEAAKIVKQVF+VLPVY+ IVPALL+
Sbjct: 339 RLGFSGQTVLAALGQAAVYNEEHSKPPPNTKSPLEEAAKIVKQVFTVLPVYDIIVPALLS 398
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
GVWNL TC+FT G+PIGPMLAKPTKGV+EI+NKFQD+ FTCEYKYDGERAQIH++EDG
Sbjct: 399 GGVWNLPKTCNFTLGVPIGPMLAKPTKGVAEILNKFQDIVFTCEYKYDGERAQIHFMEDG 458
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRA 534
+ EIYSRNAERNTGK+PDV LA+SRLKKPSV+SF+LDCE+VA+DREK+KILPFQ LSTRA
Sbjct: 459 TFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRA 518
Query: 535 RKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSI 594
RKNV+++DIKV VCI+AFD+LY NGQ L+QE L++RRE LY+SFEE+PG+FQFAT +TS
Sbjct: 519 RKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLKIRREKLYESFEEDPGYFQFATAVTSN 578
Query: 595 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPI 654
D+DEIQKFLDA+VD CEGLIIKT+D DATYEP+KRS NWLKLKKDY++SIGDS+DLVPI
Sbjct: 579 DIDEIQKFLDASVDVGCEGLIIKTLDSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPI 638
Query: 655 AAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRP 714
AAFHGRGKRTGVYGAFLLACYD + EEFQSICKIGTGFS+AML+ERSSSLRS+VI P+
Sbjct: 639 AAFHGRGKRTGVYGAFLLACYDVDKEEFQSICKIGTGFSDAMLDERSSSLRSQVIATPKQ 698
Query: 715 YYRFADTISPDVWFEPTERPETSNSPASI 743
YYR D+++PDVWFEPTE E + +I
Sbjct: 699 YYRVGDSLNPDVWFEPTEVWEVKAADLTI 727
>sp|Q869E1|DNLI1_DICDI DNA ligase 1 OS=Dictyostelium discoideum GN=lig1 PE=3 SV=1
Length = 1192
Score = 587 bits (1514), Expect = e-167, Method: Compositional matrix adjust.
Identities = 280/570 (49%), Positives = 402/570 (70%), Gaps = 13/570 (2%)
Query: 175 GEFDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPV 234
G++ P A W+KGE VP++ L+ F+M+ + + R++I + + N+ R++M +P+DLV
Sbjct: 546 GKYRPIEDAQWKKGEAVPYMVLAKTFEMMESTSSRLIIIEHLANLFRSIMLLSPKDLVMT 605
Query: 235 VYLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQ 294
+YL+ NKI P+++ ELGIG+ +IK+LAE+ GR+ +K++ E+GDLG++A+ SRS+Q
Sbjct: 606 IYLSINKIGPSYQSKELGIGEHVLIKSLAESTGRSVDVIKQELTEVGDLGIIAQNSRSTQ 665
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
++M KP PLTI VF TF+ IA +G Q+KKK+ IK LLV+ DCE Y+IR LQ KL
Sbjct: 666 TLMGKPTPLTIQSVFKTFQQIADLSGTGGQQKKKDLIKKLLVSCKDCETLYIIRSLQGKL 725
Query: 355 RIGLAEQTLLAALGQAA------------VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVL 402
RIGLAE+++L AL ++ +++ + + + V + +S L
Sbjct: 726 RIGLAERSVLMALAKSVLVTPPIDGSGQQIFDIRKQMKQEEFEERYQNVVSKVTRAYSQL 785
Query: 403 PVYEKIVPALL-TDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKY 461
P Y+ VP L+ +G+ N+ +TCS GIP+ PMLA+PT G+S+++++F DMEFTCE+KY
Sbjct: 786 PNYDLFVPHLIAVNGIDNILSTCSLKVGIPVKPMLAQPTTGISQMLDRFSDMEFTCEFKY 845
Query: 462 DGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREK 521
DGERAQIH L DG+ IY+RN E T K+PD+V V++ P+V+SF+LDCE VA+D
Sbjct: 846 DGERAQIHRLPDGTTHIYTRNLEDYTQKYPDIVANVTKFVGPNVKSFILDCEAVAFDAAT 905
Query: 522 QKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEE 581
+KIL FQ LSTRARK+V LS IKV VC++AFD+LY NGQ L+ E L RREHL ++F
Sbjct: 906 KKILSFQVLSTRARKSVQLSQIKVPVCVFAFDLLYLNGQSLIDEPLIKRREHLVENFIAS 965
Query: 582 PGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDY 641
G F FA D+++IQ +L+ AV+ +CEGL++KT+ + YEPS+RS NWLK+KKDY
Sbjct: 966 DGVFAFAKYSNISDVNDIQSYLEEAVEGNCEGLMVKTLKEKSIYEPSRRSYNWLKIKKDY 1025
Query: 642 IESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERS 701
++ + DSLDLVPI A++G+GKRTG YGA+LLACYD NNEEFQ++CKIGTGFS+ L +
Sbjct: 1026 MQGMTDSLDLVPIGAWYGKGKRTGTYGAYLLACYDENNEEFQTLCKIGTGFSDEQLTTFT 1085
Query: 702 SSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
S L+ +I +PR +RF+D+I PDVWF P+
Sbjct: 1086 SQLKPHLINQPRNQFRFSDSIKPDVWFSPS 1115
>sp|P51892|DNLI1_XENLA DNA ligase 1 OS=Xenopus laevis GN=lig1 PE=2 SV=1
Length = 1070
Score = 586 bits (1510), Expect = e-166, Method: Compositional matrix adjust.
Identities = 291/605 (48%), Positives = 400/605 (66%), Gaps = 20/605 (3%)
Query: 142 PSPKKRKVNVNSV--SAKEKIAELKSNIVLLKKKAGEFDPKMVACWEKGERVPFIFLSLV 199
P PKK NV S ++K++ E ++ K K + P ACW G++VP++ ++
Sbjct: 395 PKPKK---NVGSFFGASKQEATEEQTEYNPSKSK---YHPIDDACWCNGQKVPYLAVART 448
Query: 200 FDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASII 259
F+ I E+ R+ + + N LR+V+ TPEDL+P +YL N++ PA+EGLELGIG+ ++
Sbjct: 449 FERIEEESARLKNVETLSNFLRSVIALTPEDLLPCIYLCLNRLGPAYEGLELGIGETILM 508
Query: 260 KALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKEA 319
KA+A+A GR +K + QE GDLGLVA++SRS+Q M P L + VF + IA+
Sbjct: 509 KAVAQATGRQLEKIKAEAQEKGDLGLVAESSRSNQRTMFTPPKLMASGVFGKLKDIARMT 568
Query: 320 GKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSK 379
G S KK + IK L VA E +Y+ R L KLRIGLAEQ++L+++ QA
Sbjct: 569 GNASMNKKIDIIKGLFVACRHSEARYIARSLGGKLRIGLAEQSVLSSIAQAVCLTPPGRD 628
Query: 380 PPPNI------------QSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
PP + +S +EE A I+KQ F LP Y+ I+P LL G+ +L C T
Sbjct: 629 APPTVMDAGKGMSADARKSWIEEKAMILKQTFCELPNYDAIIPILLEHGIDDLPKHCRLT 688
Query: 428 PGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNT 487
PGIP+ PMLA PTKG+ E++ +F + FTCEYKYDGERAQIH LE+G V +YSRN E NT
Sbjct: 689 PGIPLKPMLAHPTKGIGEVLKRFDEAAFTCEYKYDGERAQIHILENGEVHVYSRNQENNT 748
Query: 488 GKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDV 547
K+PD++ + ++KK SV+S +LD E VA D EK++I PFQ L+TR RK+V S+IKV V
Sbjct: 749 TKYPDIISRIPKIKKESVKSCILDTEAVAGDAEKKQIQPFQVLTTRKRKDVDASEIKVQV 808
Query: 548 CIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAV 607
C+YAFD+LY NG+ L++E RR+ L DSF E G F FAT + + DEI +FLD ++
Sbjct: 809 CVYAFDMLYLNGESLVKEPFAKRRQLLRDSFLETEGQFMFATYMDKSNTDEISEFLDQSI 868
Query: 608 DASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVY 667
SCEGL++KT+++DATYE +KRS NWLKLKKDY+E +GD+LDLV I A+ G+GKRTG+Y
Sbjct: 869 KDSCEGLMVKTLEQDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGKGKRTGIY 928
Query: 668 GAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVW 727
G FLLA YD +EE+Q+ICKIGTGF++ LE+ + L+ VI PR YYR+ PD W
Sbjct: 929 GGFLLASYDEESEEYQTICKIGTGFTDDDLEKHYNFLKDHVIENPRSYYRWDSATEPDHW 988
Query: 728 FEPTE 732
F+P +
Sbjct: 989 FDPVQ 993
>sp|P18858|DNLI1_HUMAN DNA ligase 1 OS=Homo sapiens GN=LIG1 PE=1 SV=1
Length = 919
Score = 580 bits (1495), Expect = e-164, Method: Compositional matrix adjust.
Identities = 274/567 (48%), Positives = 390/567 (68%), Gaps = 12/567 (2%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VP++ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 273 YHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPVLY 332
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N + P +GLELG+GD ++KA+A+A GR V+ + E GD+GLVA+ SRS+Q +
Sbjct: 333 LSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRL 392
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLT + VF FR IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 393 MLPPPPLTASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRL 452
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNI------------QSPLEEAAKIVKQVFSVLPV 404
GLAEQ++LAAL QA + PP + ++ LEE I+KQ F +P
Sbjct: 453 GLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPD 512
Query: 405 YEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGE 464
++I+P LL G+ L C +PGIP+ PMLA PT+G+SE++ +F++ FTCEYKYDG+
Sbjct: 513 LDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQ 572
Query: 465 RAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKI 524
RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+DREK++I
Sbjct: 573 RAQIHALEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQI 632
Query: 525 LPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 584
PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L++E L RR+ L ++F E G
Sbjct: 633 QPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGE 692
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLKKDY++
Sbjct: 693 FVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDG 752
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+GD+LDLV I A+ GRGKR G YG FLLA YD ++EE Q+ICK+GTGFS+ LEE SL
Sbjct: 753 VGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGFSDEELEEHHQSL 812
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPT 731
++ V+P PRPY R + PD W +P+
Sbjct: 813 KALVLPSPRPYVRIDGAVIPDHWLDPS 839
>sp|P37913|DNLI1_MOUSE DNA ligase 1 OS=Mus musculus GN=Lig1 PE=1 SV=2
Length = 916
Score = 578 bits (1490), Expect = e-164, Method: Compositional matrix adjust.
Identities = 275/573 (47%), Positives = 390/573 (68%), Gaps = 24/573 (4%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 271 YHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPPDLLPVLY 330
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +
Sbjct: 331 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRL 390
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M P PLTI+ VF F IA+ G S KK + IK L VA E +Y+ R L +LR+
Sbjct: 391 MLPPPPLTISGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRHSEARYIARSLSGRLRL 450
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSP------------------LEEAAKIVKQV 398
GLAEQ++LAAL QA S PP + P LEE I+KQ
Sbjct: 451 GLAEQSVLAALAQAV------SLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQGMILKQT 504
Query: 399 FSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
F +P ++I+P LL G+ L C +PG+P+ PMLA PT+GVSE++ +F++++FTCE
Sbjct: 505 FCEVPDLDRIIPVLLEHGLERLPEHCKLSPGVPLKPMLAHPTRGVSEVLKRFEEVDFTCE 564
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
YKYDG+RAQIH LE G V+I+SRN E NTGK+PD++ + ++K PSV SF+LD E VA+D
Sbjct: 565 YKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFILDTEAVAWD 624
Query: 519 REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
REK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L+++ L RR+ L ++F
Sbjct: 625 REKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRRRQLLRENF 684
Query: 579 EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638
E G F F T+L + D ++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLK
Sbjct: 685 VETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLK 744
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
KDY++ +GD+LDLV I A+ GRGKR G YG FLLA YD +EE Q+ICK+GTGFS+ LE
Sbjct: 745 KDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDEESEELQAICKLGTGFSDEELE 804
Query: 699 ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
E SL++ V+P PRPY R ++PD W +P+
Sbjct: 805 EHHQSLQALVLPTPRPYVRIDGAVAPDHWLDPS 837
>sp|Q9JHY8|DNLI1_RAT DNA ligase 1 OS=Rattus norvegicus GN=Lig1 PE=2 SV=1
Length = 918
Score = 561 bits (1445), Expect = e-159, Method: Compositional matrix adjust.
Identities = 266/573 (46%), Positives = 388/573 (67%), Gaps = 24/573 (4%)
Query: 177 FDPKMVACWEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVY 236
+ P ACW+ G++VPF+ ++ F+ I + R+ + + + N+LR+V+ +P DL+PV+Y
Sbjct: 273 YHPIEDACWKHGQKVPFLAVARTFEKIEEVSARLKMVETLSNLLRSVVALSPTDLLPVLY 332
Query: 237 LAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSM 296
L+ N++ P +GLELG+GD ++KA+A+A GR ++ + E GD+GLVA+ SRS+Q +
Sbjct: 333 LSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAEKGDVGLVAENSRSTQRL 392
Query: 297 MRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRI 356
M PLT++ VF F IA+ G S KK + IK L VA E +++ R L +LR+
Sbjct: 393 MLPSPPLTVSGVFTKFCDIARLTGSASMAKKMDIIKGLFVACRYSEARFIARSLSGRLRL 452
Query: 357 GLAEQTLLAALGQAAVYNEQHSKPPPNIQSP------------------LEEAAKIVKQV 398
GLAEQ++LAAL QA S PP + P LEE I+KQ
Sbjct: 453 GLAEQSVLAALAQAG------SLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQGMILKQT 506
Query: 399 FSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCE 458
F +P ++I+P LL G+ +L C +PG+P+ PMLA PT+GV E++ +F++++FTCE
Sbjct: 507 FCEVPDLDRIIPVLLEHGLESLPEHCKLSPGVPLKPMLAHPTRGVREVLKRFEEVDFTCE 566
Query: 459 YKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYD 518
YKY G+RAQIH LE G V+I+SRN E N+GK+PD++ + ++K PSV SF+LD E VA+D
Sbjct: 567 YKYYGQRAQIHVLEGGEVKIFSRNQEDNSGKYPDIISRIPKIKHPSVTSFILDTEAVAWD 626
Query: 519 REKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSF 578
REK++I PFQ L+TR RK V S+I+V VC+YAFD++Y NG+ L ++ L RR+ L ++F
Sbjct: 627 REKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLARQPLSRRRQLLRENF 686
Query: 579 EEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLK 638
E G F FAT+L + D+++I +FL+ +V SCEGL++KT+D DATYE +KRS NWLKLK
Sbjct: 687 VETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLK 746
Query: 639 KDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLE 698
KDY+E +GD+LDLV I A+ GRGKR G YG FLLA YD +EE +ICK+GTGFS+ LE
Sbjct: 747 KDYLEGVGDTLDLVVIGAYLGRGKRPGRYGGFLLAAYDEESEELAAICKLGTGFSDEELE 806
Query: 699 ERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
E ++++ ++P PRPY R ++P+ W +P+
Sbjct: 807 EHHQNMQALLLPTPRPYVRIDGAVAPNHWLDPS 839
>sp|Q9W1H4|DNLI1_DROME DNA ligase 1 OS=Drosophila melanogaster GN=DNA-ligI PE=1 SV=2
Length = 747
Score = 547 bits (1409), Expect = e-154, Method: Compositional matrix adjust.
Identities = 285/679 (41%), Positives = 417/679 (61%), Gaps = 27/679 (3%)
Query: 78 NSSSSSSSPKKRRTLDTQTPKTTNSVVGEKIQEVAEEPSNDLVKPISNQIDNPIDSEKES 137
+++ S S PKK +D +T + E A + V+P+S +DSE+++
Sbjct: 14 DATDSPSPPKKVPKIDAKTELPDEPHIK---SESASPETKPKVEPMS------VDSEEKT 64
Query: 138 QPTPPSPKKRKVNVNSVSAKEKIAELKSNIVLLKKK--------AGEFDPKMVACWEKGE 189
P + KK V+ + +K+ + N K+ A + P A W+ +
Sbjct: 65 SPVK-NVKKEPKEVDDKTTDKKVTTIGLNSTAATKEDVENYDPSADSYHPLKNAYWKDKK 123
Query: 190 RVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL 249
P++ L+ F +I GR+ + D + N +VM +PEDLVP VYL+ N++APA+EGL
Sbjct: 124 VTPYLALARTFQVIEETKGRLKMIDTLSNFFCSVMLVSPEDLVPSVYLSINQLAPAYEGL 183
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
ELG+ + +++KA+ +A GR +H+K Q Q GDLG+VA+ SR SQ MM +P PL + VF
Sbjct: 184 ELGVAETTLMKAICKATGRNLAHIKSQTQLTGDLGIVAEQSRVSQRMMFQPAPLNVRDVF 243
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK +G + K + + + VA E ++ IR L KLRIG+AEQ+LL AL
Sbjct: 244 RKLREIAKLSG----QSKMDLVYNMFVACRSSEARFFIRSLIGKLRIGIAEQSLLTALAI 299
Query: 370 AAVYNEQ-----HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
V SK P + + + ++K + P Y+ I+PA+L + L C
Sbjct: 300 GLVKKNHIDDCKASKVPDVYKDEIVDTTLLLKTAYCQCPNYDIIIPAILKYDIKELQERC 359
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
PG+P+ PMLA+PTKGV E+ +F M+ TCE+KYDGERAQIH E G + I+SRN+E
Sbjct: 360 PMHPGMPLRPMLAQPTKGVHEVFERFGGMQITCEWKYDGERAQIHRNEKGEISIFSRNSE 419
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK 544
NT K+PD++ + L K V+S+++D EIVA+D E+++ILPFQ LSTR RKNV + +IK
Sbjct: 420 NNTAKYPDLIARSTALLKGDVKSYIIDSEIVAWDVERKQILPFQVLSTRKRKNVDIEEIK 479
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
V VC+Y FD+LY NG L+ + L RR+ L + F+E G ++FAT L + D+DE+Q+FL+
Sbjct: 480 VQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFATALDTNDIDEVQQFLE 539
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
++ +CEGL++KT+D +ATYE +KRS NWLKLKKDY+ ++GDSLDLV I + G+G+RT
Sbjct: 540 ESIKGNCEGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRT 599
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
G YG FLLACYD+ NEE+QSICKIGTGF++ L+ S L V + YYR+ ++ P
Sbjct: 600 GTYGGFLLACYDTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYRYDPSLEP 659
Query: 725 DVWFEPTERPETSNSPASI 743
D WFEP + E + S+
Sbjct: 660 DHWFEPVQVWEVKCADLSL 678
>sp|P12000|DNLI1_SCHPO DNA ligase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cdc17 PE=3 SV=1
Length = 768
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/535 (48%), Positives = 353/535 (65%), Gaps = 3/535 (0%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
F I N + R+ I DI+ ++ P DL+ VYL+ NK+ P + GLELGIG++ I
Sbjct: 155 AFTKIENTSKRLEIIDIMGTYFFGILRDHPSDLLACVYLSINKLGPDYSGLELGIGESII 214
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLIAKE 318
+KA+ E+ G+T +K + ++GDLGLVA+ SR +Q M KP LTI +FD+ + IA+
Sbjct: 215 MKAIGESTGQTLQQIKLSFHKVGDLGLVAQTSRQNQPTMFKPAALTIPFLFDSLKKIAQM 274
Query: 319 AGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHS 378
+G SQ +K IK LL + EP+YLIR L+ KLR+ LAE+T+L AL A
Sbjct: 275 SGNQSQNRKIGVIKRLLSSCEGAEPKYLIRALEGKLRLQLAEKTILVALANATAQYHADK 334
Query: 379 KPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAK 438
Q E +I++ V+ LP Y+ IVP L+ G+ L TC TPGIP PMLAK
Sbjct: 335 NGEKLSQQDRIEGEQILRDVYCQLPSYDLIVPHLIEHGLGTLRETCKLTPGIPTKPMLAK 394
Query: 439 PTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLAVS 498
PTK +SE++N F FTCEYKYDGERAQ+H+ EDG ++SRN+E + ++PD+ ++VS
Sbjct: 395 PTKQISEVLNTFDQAAFTCEYKYDGERAQVHFTEDGKFYVFSRNSENMSVRYPDISVSVS 454
Query: 499 RLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYAFDILYRN 558
+ KKP RSF+LDCE V +DR++ KILPFQ L+TR RK+V + DIKV C++AFDILY N
Sbjct: 455 KWKKPDARSFILDCEAVGWDRDENKILPFQKLATRKRKDVKIGDIKVRACLFAFDILYLN 514
Query: 559 GQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKT 618
GQPLL+ L RR+ LY F+ G F FA ++ I++FL+ +V SCEGL++K
Sbjct: 515 GQPLLETPLNERRKLLYSMFQPSTGDFTFAKHSDQKSIESIEEFLEESVKDSCEGLMVKM 574
Query: 619 MDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDS 677
++ D+ YEPSKRS +WLK+KKDY+ +GDSLDL+ I A++G+GKRT VYGAFLL CYD
Sbjct: 575 LEGPDSHYEPSKRSRHWLKVKKDYLSGVGDSLDLIVIGAYYGKGKRTSVYGAFLLGCYDP 634
Query: 678 NNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT--ISPDVWFEP 730
+ E QSICK+GTGFSE LE + L+ VI K + +Y +D PDVWFEP
Sbjct: 635 DTETVQSICKLGTGFSEEHLETFYNQLKDIVISKKKDFYAHSDVPAHQPDVWFEP 689
>sp|P04819|DNLI1_YEAST DNA ligase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=CDC9 PE=1 SV=2
Length = 755
Score = 509 bits (1312), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/546 (44%), Positives = 364/546 (66%), Gaps = 5/546 (0%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ + VF+ I + R+ I I + +M+ + ++L+P YL N++ P +E
Sbjct: 146 IPYSEVCEVFNKIEAISSRLEIIRICSDFFIKIMKQSSKNLIPTTYLFINRLGPDYEAGL 205
Query: 251 LGIGDASI-IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVF 309
++ +K ++E CG++ S +K +Y+++GDLG +A +R+ Q M KP PLT+ +VF
Sbjct: 206 ELGLGENLLMKTISETCGKSMSQIKLKYKDIGDLGEIAMGARNVQPTMFKPKPLTVGEVF 265
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
R IAK GKDSQ KK IK +L A E ++LIR L+SKLRIGLAE+T+L +L +
Sbjct: 266 KNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKTVLISLSK 325
Query: 370 AAVYNEQHSKPPPNIQSP---LEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF 426
A + ++++ + P+ P LE A + ++ F +P YE ++ + L G+ NL C+
Sbjct: 326 ALLLHDENREDSPDKDVPMDVLESAQQKIRDAFCQVPNYEIVINSCLEHGIMNLDKYCTL 385
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERN 486
PGIP+ PMLAKPTK ++E++++FQ FT EYKYDGERAQ+H L DG++ IYSRN E
Sbjct: 386 RPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTMRIYSRNGENM 445
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD 546
T ++P++ + + ++ +LDCE VA+D+++ KILPFQ LSTR RK+V L+D+KV
Sbjct: 446 TERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPFQVLSTRKRKDVELNDVKVK 505
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
VC++AFDIL N + L+ + L+ RRE+L + PG FQ+AT +T+ +LDE+QKFLD +
Sbjct: 506 VCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYATQITTNNLDELQKFLDES 565
Query: 607 VDASCEGLIIKTMDR-DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
V+ SCEGL++K ++ ++ YEPSKRS NWLKLKKDY+E +GDSLDL + A++GRGKRTG
Sbjct: 566 VNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYYGRGKRTG 625
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
YG FLL CY+ + EF++ CKIGTGFS+ ML+ L +I P+ + F + PD
Sbjct: 626 TYGGFLLGCYNQDTGEFETCCKIGTGFSDEMLQLLHDRLTPTIIDGPKATFVFDSSAEPD 685
Query: 726 VWFEPT 731
VWFEPT
Sbjct: 686 VWFEPT 691
>sp|Q27474|DNLI1_CAEEL DNA ligase 1 OS=Caenorhabditis elegans GN=lig-1 PE=3 SV=2
Length = 773
Score = 503 bits (1295), Expect = e-141, Method: Compositional matrix adjust.
Identities = 251/548 (45%), Positives = 357/548 (65%), Gaps = 5/548 (0%)
Query: 185 WEKGERVPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAP 244
W KG +VP+ +L + I +G+ + D + V++ +P+DL VY++ N++ P
Sbjct: 13 WAKGSKVPYKEFALTLEKIEELSGKKKV-DELAQFFTKVLDFSPDDLTACVYMSVNQLGP 71
Query: 245 AHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLT 304
++EGLELG+ + S+IKA+A+A GRTE +K+ + GDLG VA+ SRS+Q M+ P LT
Sbjct: 72 SYEGLELGVAENSLIKAVAKATGRTEGKIKEDLRAKGDLGTVAQQSRSNQKMLAVPKALT 131
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
+ VF+ IAK +G + KK + I ALL+A E ++L+R+L K+RIGL EQ++L
Sbjct: 132 VPTVFNKLTEIAKLSGTSAMNKKVDAISALLIACQGIEARFLVRMLAGKMRIGLGEQSVL 191
Query: 365 AALGQAAVYNE-QHSKPPPNIQSPLEEA-AKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+ALG A ++ K + L++A K VK + P Y +++ LT+GV L
Sbjct: 192 SALGHAFTLSKITDQKVRGDKLDSLKDANVKRVKTAYCECPNYNRLIEVALTEGVEALVE 251
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
C +PGIP+ PMLA PTKG+ EI+ +F++ TCE+KYDGER QIH EDG + IYSRN
Sbjct: 252 KCKLSPGIPLKPMLAHPTKGIDEIMRRFRNQTMTCEWKYDGERGQIHKREDGQIFIYSRN 311
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
E NT K+PD++ +S V SF++D E+VA D E ILPFQ LSTR RKN + D
Sbjct: 312 QENNTTKYPDIIEKISSCIGDGVTSFIVDAEVVAID-EAGLILPFQVLSTRKRKNAT-DD 369
Query: 543 IKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
V V ++ FD+LY NG+PL+++ LR RRE L +F++ G F FAT++ + D DEI F
Sbjct: 370 NGVKVVVFLFDLLYFNGEPLVRKPLRKRRELLRTNFKKIDGSFYFATSVDTNDTDEINSF 429
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
D AV CEGL+IKT+D +ATYE S+RS +WLK+KKDY++ +GD+LDLV + A+ G GK
Sbjct: 430 FDEAVQNKCEGLMIKTLDTEATYEISRRSHSWLKMKKDYVDGVGDTLDLVVMGAYSGVGK 489
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
RTGVYG +LL CY+ EE++S+CKIGTGF++ L E+ L+ K I K YY+F T+
Sbjct: 490 RTGVYGGYLLGCYNPTTEEYESVCKIGTGFTDEDLAEQYKILQDKKIDKSPSYYQFDHTL 549
Query: 723 SPDVWFEP 730
PD F P
Sbjct: 550 KPDDTFSP 557
>sp|Q9C1W9|DNLI3_SCHPO DNA ligase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=adl1 PE=3 SV=1
Length = 774
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 328/572 (57%), Gaps = 24/572 (4%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ F +IS+ RI I ++ N L T++ P+ L+ V+L N IAP G LG+G
Sbjct: 165 LANTFSLISSTKSRIRIVTLLTNFLLTLLYADPDSLIATVWLCTNSIAPNFYGKNLGVGP 224
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDPLTITKVFDTFRLI 315
A KAL E CG T S +K + + GD G VA ++ S + +P+PLTI KV+ T I
Sbjct: 225 AMYSKALKEVCGITASALKNLWNKYGDPGDVAFEAKVSVRTLSRPEPLTIKKVYSTLLKI 284
Query: 316 AKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVY-- 373
A G +Q +K K LL+++ E +Y+ R + LRIG + T+LA+L +A
Sbjct: 285 ADSNGNGAQNRKLELTKFLLISSNAEEVRYIGRSIMQNLRIGAVQNTMLASLSKAFFIFD 344
Query: 374 --NEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIP 431
NE + ++Q + +IVKQ F +P Y +V LL +G+ NL + S PGIP
Sbjct: 345 NQNEIFNFNSDSLQQQFRQGEEIVKQSFFQVPDYNILVATLLREGIENLKDNMSIRPGIP 404
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFP 491
+ PML TK + ++ + D F+CE+KYDG+RAQIH G+++I+SR+ E TG+FP
Sbjct: 405 VKPMLGSITKNLQHMLERLTDHNFSCEFKYDGQRAQIHCDRLGNIKIFSRHLEEITGRFP 464
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCIYA 551
DV+ V++L F+++ E+VA D+ +IL FQ LSTR RK V+++DI +DVC++
Sbjct: 465 DVI-EVAQLALKHSCDFIIEGELVAIDKSNGQILDFQKLSTRERKKVTVADITIDVCVFV 523
Query: 552 FDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASC 611
FDI++ +G+ LQ L RR ++ F P FQF ++L + + IQ+F A+ C
Sbjct: 524 FDIMFCDGKSCLQMPLIERRRMFFEHFNLIPNRFQFVSSLETNEEQSIQEFFSLAITNKC 583
Query: 612 EGLIIKTMDRD-----ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
EGL++K ++ +TYEP KR W+K+K+DY + +SLDLVPI A++G G++ G
Sbjct: 584 EGLMVKVLNGTNSKFPSTYEPDKRGEGWIKVKQDYDDEF-ESLDLVPIGAWYGNGRKAGW 642
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSS--SLRSKVIPKPRPYYRFADT--I 722
+ LLA Y+ + ++++CK +GFS+ +E + SL S +P Y F +T +
Sbjct: 643 FSPILLAVYNPDTGAYEAVCKCMSGFSDQFYKELTQKYSLESGN-SSLKPIYNFCETGKV 701
Query: 723 SPDVWFEPTERPETSNSPASIVYDSQITCLPS 754
+P ++F P E E + +QIT P+
Sbjct: 702 TPQIYFAPQEVWE--------IKGAQITSSPA 725
>sp|A3MS62|DNLI_PYRCJ DNA ligase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1)
GN=lig PE=3 SV=1
Length = 583
Score = 293 bits (749), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 299/579 (51%), Gaps = 40/579 (6%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ V + + T R + ++ ++ + + PE++ +VY + P EG+ELG+ +
Sbjct: 6 LAKVLAAVESTTQRTTMVKLLTSLFK---KAKPEEIDKIVYFILGDLRPPWEGVELGVAE 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAK-----ASRSSQSMMRKPDPLTITKVFD 310
I+A+++A G + + ++ Y++ GD+G VA+ R + + PL + +V+D
Sbjct: 63 KLCIRAISKATGLSAAELEGWYKKSGDVGEVARRALAAGKRPTLLAFAQQKPLEVAEVYD 122
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
T +AK AG+ +Q+ K + + +L A+ E +Y+ R + KLR+G+A+ TL+ AL +A
Sbjct: 123 TLLKVAKAAGEGAQDLKVSLLSSLFSRASPEEAKYIARFVVGKLRLGVADMTLIEALSEA 182
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
+++ + ++ L ++ + V P+ E TPG+
Sbjct: 183 FGVSKEGLERAYHVYPDL---GRLARHVAEGRPLEE-----------------IKITPGV 222
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
P+ PMLA+ SEI+ K CEYKYDGERAQIH L +GSV+I+SR E T +
Sbjct: 223 PVLPMLAQRLSSASEILAKLGGTAI-CEYKYDGERAQIH-LREGSVKIFSRRLEDITHAY 280
Query: 491 PDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCI 549
PDV AV K R +L+ EIVA D + ++LPFQ L R RK +V+ + +
Sbjct: 281 PDVAKAVKEAVK--AREAILEGEIVAVDPDTGEMLPFQELMHRKRKHDVAEAMEAYPAVL 338
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
Y FD+LY +G+ L + L RR L + EE G A +++ F AV
Sbjct: 339 YLFDLLYVDGEDLTTQPLIYRRLRLSEVVEE-GGDVYIAKWGMFDGAEDVDLFFHEAVSL 397
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGA 669
EGLI K+ +TYE R NW+K K+DY + D++DLV + AFHGRGKR G+YGA
Sbjct: 398 GTEGLICKS--PTSTYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGA 455
Query: 670 FLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFE 729
FLLA YD + + F ++CK+G+GF++A L L+ IP P R + PDVWF
Sbjct: 456 FLLAAYDPSTDMFYTVCKVGSGFTDADLRRMYDMLQPLKIPHRHP--RVVSKMQPDVWFV 513
Query: 730 PTERPETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
P E A I TC + P RF R
Sbjct: 514 PQVVIEVIG--AEITLSPLHTCCIGAVKPGVGLAIRFPR 550
>sp|A1RTK4|DNLI_PYRIL DNA ligase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189)
GN=lig PE=3 SV=1
Length = 584
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 191/575 (33%), Positives = 301/575 (52%), Gaps = 46/575 (8%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
+ + T R + ++ ++ + + PE++ ++Y + P EG+ELG+ + ++A+
Sbjct: 13 VESTTQRTTMVKLLTSLFK---KARPEEIDKIIYFVLGDLRPPWEGVELGVAEKLCLRAV 69
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD--------PLTITKVFDTFRL 314
++A G + S ++ Y++ GD+G +A+R + S ++P PL +++V+DT
Sbjct: 70 SKATGVSISELEALYKKTGDVG---EAARKALSTAKRPGLLAFGQQKPLEVSEVYDTLLK 126
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+A+ +G+ +Q+ K + + +L A+ E +Y+ R + KLR+G+A+ TL+ AL A +
Sbjct: 127 VAQASGEGAQDMKISLLASLFAKASPEEAKYIARFVVGKLRLGVADMTLIEALSDAFGVD 186
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
++ + +I L K+ + V P+ E TPG+P+ P
Sbjct: 187 KEALERAYHIYPDL---GKLARHVAEGRPLEE-----------------IKITPGVPVLP 226
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLA+ SEI+ K CEYKYDGERAQIH L++G V+I+SR E T +PDVV
Sbjct: 227 MLAQRLSSSSEILAKLGGSAI-CEYKYDGERAQIH-LKEGVVKIFSRRLEDITHAYPDVV 284
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKN-VSLSDIKVDVCIYAFD 553
AV + S R +L+ EIVA D + +LPFQ L R RK+ V+++ V + FD
Sbjct: 285 KAVR--EAVSAREAILEGEIVAIDPDTGDMLPFQELMHRKRKHEVAVAVEMYPVVLNLFD 342
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEG 613
+LY +G+ L E L RR L + +E A D +EI F AV EG
Sbjct: 343 LLYIDGEDLTNEPLIYRRVRLSEVVQETEKV-SIAKWRVFDDAEEIDVFFHEAVSLGMEG 401
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
L+ K+ + YE R NW+K K+DY + D++DLV + AF+GRGKR G+YGAFLLA
Sbjct: 402 LVCKS--PTSVYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLA 459
Query: 674 CYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTER 733
YD + F ++CK+G+GF++A L++ L+ IP P R + PDVWF P
Sbjct: 460 AYDPATDMFYTVCKVGSGFTDADLKKMYEMLQPYKIPHRHP--RVVSKMEPDVWFTPQVV 517
Query: 734 PETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
E A I TC + P RF R
Sbjct: 518 IEVIG--AEITLSPLHTCCLGAVKPGVGLAIRFPR 550
>sp|B1L3V2|DNLI2_KORCO DNA ligase 2 OS=Korarchaeum cryptofilum (strain OPF8) GN=lig2 PE=3
SV=1
Length = 594
Score = 287 bits (734), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 292/543 (53%), Gaps = 31/543 (5%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
FI ++ +++ I TGR+ + D + N+ + T PE L +VYL IA + EG+ELG
Sbjct: 3 FIDVAKIYEKIEATTGRLEMIDYLKNLF---LSTPPEILDKIVYLTLGNIAASFEGIELG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAK---ASRSSQSMMRKPDPLTITKVF 309
+G+ ++AL+ A G + ++++Y ++GD+G +A+ + +++QS + LT+ +VF
Sbjct: 60 VGEKLFLRALSLATGIPQERLEEEYPKLGDIGKLAEWAVSKKAAQSFF--TEDLTVERVF 117
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
DT +A+ G+ +Q+ K I +L A E +Y+ R++ KLR+G+ + T+L AL +
Sbjct: 118 DTLSKVARATGEGAQDLKVRLIAGILSDAKPLEARYIARIVTEKLRLGVRDMTVLDALSE 177
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPG 429
A + + +++ +++ P KI + G+ L + + T G
Sbjct: 178 AFLKGRAYRDK--------------LERKYNIYPDIGKIAKVVAEKGIKGL-DEITITLG 222
Query: 430 IPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGK 489
IP+ PMLA+ + EI+ K F E+KYDGER QIH +DG V+I+SR E T
Sbjct: 223 IPVRPMLAQRLRSAEEIMEKIGPRIF-AEFKYDGERMQIHVWKDGKVKIFSRRLEDITEP 281
Query: 490 FPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV-DVC 548
+PDV VS K VLDCE VA + + +ILPFQ L R RK +K
Sbjct: 282 YPDVREYVS--KAVEGHEVVLDCETVAINPDTGEILPFQELMHRRRKYGVEEAMKTYPTV 339
Query: 549 IYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVD 608
YAFD+LY +G+ LL EQL RR+ L + +E +++E+++F + AV+
Sbjct: 340 TYAFDLLYLDGRELLDEQLDDRRKILKEILKENEKARLVQYEEIDGNVEELERFFEHAVE 399
Query: 609 ASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYG 668
EGL++K D + Y+ R +W+KLK+ YI + + +DLV + AF G+GKR G YG
Sbjct: 400 MGTEGLVVK--DPKSIYQAGVRGWSWIKLKRSYISKMIEPVDLVVVGAFWGKGKRAGTYG 457
Query: 669 AFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWF 728
A L+A Y + F+++CK+G+GF++ L L I P I DV+F
Sbjct: 458 ALLMAAYSPEEDVFKTVCKMGSGFTDEELARMPKLLEDYKIDHKHP--SVISNIEADVYF 515
Query: 729 EPT 731
P
Sbjct: 516 VPV 518
>sp|A4WH24|DNLI_PYRAR DNA ligase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM
11321) GN=lig PE=3 SV=1
Length = 584
Score = 286 bits (733), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 190/575 (33%), Positives = 301/575 (52%), Gaps = 46/575 (8%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
+ + T R ++ ++ ++ + + PE++ V+YL + P EGLELG+G+ ++AL
Sbjct: 13 VESTTQRSVMVKLLASLFKKAL---PEEIDKVIYLILGDLRPPWEGLELGVGEKLCLRAL 69
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD--------PLTITKVFDTFRL 314
A+A G +++ ++ Y++ GD+G +A+R + + ++P PL +++V+D
Sbjct: 70 AKATGTSQAELESMYKKTGDIG---EAARRALASSKRPGLLAFGSQKPLEVSEVYDALIK 126
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+A+ G+ +Q+ K + +L ++ E +Y+ R + KLR+G+A+ T++ AL A
Sbjct: 127 VARATGEGAQDMKIALLSSLFARSSPEEGKYIARFVVGKLRLGVADMTIIEALADAYGVR 186
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
++ + ++ L AK+V S P+ + TPG+P+ P
Sbjct: 187 KEDLERAYHVYPDLGHLAKLVA---SGKPL-----------------DEVKVTPGVPVLP 226
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLA+ SEI+ K CEYKYDGERAQIH + G V I+SR E T +PDVV
Sbjct: 227 MLAQRLSSSSEILAKLGGAAI-CEYKYDGERAQIHISQSG-VRIFSRRLEDITHAYPDVV 284
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV-DVCIYAFD 553
AV + S R +L+ EIVA D + ++LPFQ L R RK+ + +++ +Y FD
Sbjct: 285 KAVR--EAVSAREAILEGEIVAVDPDTGEMLPFQELMHRKRKHEVAAAMEMYPTVLYLFD 342
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEG 613
I+Y +G+ L E L RR L + E Q A D D + F AV EG
Sbjct: 343 IVYVDGEDLTNEPLIYRRVKLSEIVHESDKV-QIAKWQMFDDPDTVDVFFHEAVSVGTEG 401
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
LI K+ + YE R NW+K K+DY + D++DLV + AF+GRGKR G+YGAFLLA
Sbjct: 402 LICKSPTSE--YEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLA 459
Query: 674 CYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTER 733
YD +++ F ++CK+G+GF++A L++ L+ IP P R + + DVWF P
Sbjct: 460 AYDPSSDMFYTVCKVGSGFTDADLKKMYEILQPLKIPHRHP--RVSSKMEADVWFVPQVV 517
Query: 734 PETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
E A I TC + P RF R
Sbjct: 518 IEVIG--AEITLSPLHTCCLGAVRPGVGLAVRFPR 550
>sp|A8MDU6|DNLI_CALMQ DNA ligase OS=Caldivirga maquilingensis (strain ATCC 700844 / DSMZ
13496 / JCM 10307 / IC-167) GN=lig PE=3 SV=1
Length = 603
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 287/547 (52%), Gaps = 44/547 (8%)
Query: 199 VFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASI 258
V ++ T R ++ + ++L +T P+ + V+Y + P EG+ELG+ +
Sbjct: 13 VLKLVEATTQRTVMAKALSSLL---AKTPPQVIDKVIYFLLGSLRPDWEGVELGLAERLT 69
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP--------------LT 304
++A++ A G V++ Y+++GD G VAK R+++ K LT
Sbjct: 70 LRAISMATGLPIRQVEELYKKLGDAGEVAK--RAAEIKRSKGGGGTIFDFIDTGPKRRLT 127
Query: 305 ITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLL 364
I+KV+DT IAK +G+ +Q+ K + +LL A E +Y+ R + +LR+G+A+ T+L
Sbjct: 128 ISKVYDTLMAIAKASGEGAQDTKVKLLSSLLTDAEPDEAKYITRFVIGRLRLGVADMTIL 187
Query: 365 AALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTC 424
AL A N ++++ + V P KI L +G
Sbjct: 188 DALSDAFDVNRD-----------------LLEKAYHVYPDLGKIAKTL-AEGGEEAVKAI 229
Query: 425 SFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAE 484
TPG+PI PMLA+ EI+NK + CE+KYDGER QIH L+DG+V+I+SR E
Sbjct: 230 KVTPGVPIQPMLAERLSSPKEILNKLGGVAI-CEFKYDGERMQIHKLKDGTVKIFSRRME 288
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDI 543
T ++PDV A + F+++ E VA D + + PFQ L R RK N+ +
Sbjct: 289 DITNQYPDV--AEYAREAIDAEEFIVEGEGVAIDPDTGEFKPFQELMHRKRKHNIKEAIE 346
Query: 544 KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFL 603
+ + +Y FD++Y NGQ L L R++ L+ S + A + + D D ++KF
Sbjct: 347 EYPINLYLFDVMYVNGQDLTDLPLPDRKKVLF-SIIKPHEHVHHADWIITDDADSLEKFF 405
Query: 604 DAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKR 663
A+ + CEG++ K++ + YE R W+K K+DY + D++DLV + AF GRGKR
Sbjct: 406 LDAISSGCEGVMCKSVKLGSVYEMGARGWLWIKYKRDYKSELSDTMDLVVVGAFWGRGKR 465
Query: 664 TGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTIS 723
G YGA LLA YD ++++F ++CK+G+GF++ L++ L IP P R +
Sbjct: 466 AGTYGALLLAAYDPDSDQFYTVCKVGSGFTDEDLKKLPQMLEPYKIPHRHP--RVVSKME 523
Query: 724 PDVWFEP 730
PD+WF P
Sbjct: 524 PDIWFTP 530
>sp|B1YA52|DNLI_PYRNV DNA ligase OS=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278
/ V24Sta) GN=lig PE=3 SV=1
Length = 584
Score = 284 bits (727), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 295/583 (50%), Gaps = 62/583 (10%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
+ + T R + ++ ++L+ P+++ +VY + P EG+ELG+ + ++A+
Sbjct: 13 VESTTQRTTMVKLLTSLLK---RARPDEVDKIVYFVLGDLKPPWEGVELGVAEKLCLRAV 69
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD--------PLTITKVFDTFRL 314
++A G S ++ Y+ GD+G +A+R + S ++P PL +++V+DT
Sbjct: 70 SKAAGTPLSELEAVYKRTGDVG---EAARRALSAAKRPGLLAFGQQKPLEVSEVYDTLLK 126
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL------G 368
+AK AG+ +Q+ K + + +L AT E +Y+ R + KLR+G+A+ TLL AL G
Sbjct: 127 VAKAAGEGAQDMKISLLASLFARATPEEAKYIARFVVGKLRLGVADMTLLEALSEAFGVG 186
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
+ A+ H P + K+ + V P+ E TP
Sbjct: 187 KEALERAYHVWP---------DMGKLARHVAEGRPLEE-----------------VKITP 220
Query: 429 GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
G+P+ PMLA+ SEI+ K CEYKYDGERAQIH + GSV+I+SR E T
Sbjct: 221 GVPVLPMLAQRLSSASEILAKLGGAA-VCEYKYDGERAQIH-ISGGSVKIFSRRLEDITH 278
Query: 489 KFPDVVLAVSRLKKPSVRS--FVLDCEIVAYDREKQKILPFQTLSTRARKN-VSLSDIKV 545
+PDVV AV K SV + +L+ EIVA D + +LPFQ L R RK+ V+ +
Sbjct: 279 AYPDVVKAV----KESVAAGEAILEGEIVAVDPDTGDMLPFQELMHRKRKHEVAAAVESY 334
Query: 546 DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDA 605
+ FD+LY +G+ L E L RR L + E A D E+ F
Sbjct: 335 PAVLNLFDVLYLDGEDLTGEPLIYRRLRLSEVVHETEKV-SIARWRLFDDPGEVDVFFHE 393
Query: 606 AVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTG 665
AV EGL+ K+ + YE R NW+K K+DY + D++DLV + AF+GRGKR G
Sbjct: 394 AVSLGMEGLVCKS--PTSIYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAG 451
Query: 666 VYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPD 725
+YGAFLLA YD + F ++CK+G+GF++A L++ L+ IP P R ++PD
Sbjct: 452 LYGAFLLAAYDPQTDMFYTVCKVGSGFTDADLKKMYEVLQPYKIPHRHP--RVVSKMTPD 509
Query: 726 VWFEPTERPETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
VWF P E A I TC + P RF R
Sbjct: 510 VWFTPQVVIEVIG--AEITLSPLHTCCLGAVRPGVGLAIRFPR 550
>sp|Q6L195|DNLI_PICTO DNA ligase OS=Picrophilus torridus (strain ATCC 700027 / DSM 9790 /
JCM 10055 / NBRC 100828) GN=lig PE=3 SV=2
Length = 585
Score = 283 bits (725), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 291/537 (54%), Gaps = 34/537 (6%)
Query: 200 FDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASII 259
F + T R+ +T I+ + + + +DL +VYL K+ P + G+ELG+ D II
Sbjct: 10 FSRMEETTKRLELTSILAELFKR----SGDDLKKLVYLVQGKLMPDYLGIELGLSDKLII 65
Query: 260 KALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKP---DPLTITKVFDTFRLIA 316
K+L++A GR+E + + + +GDLG + A S S +++P + LT+ V++ I+
Sbjct: 66 KSLSKASGRSEEDINRIFSRLGDLG--STAEEISSSGIQRPLLKESLTVDYVYNQLIKIS 123
Query: 317 KEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQ 376
G S + K + LL+ + E +Y+ R++ KLR+G+A+ T+L L +A ++E+
Sbjct: 124 GYTGHGSIKTKMDAYIDLLINSGPMEIKYITRIITGKLRLGVADSTILDGLIEA--FSEK 181
Query: 377 HSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPML 436
+ A ++ ++ P I L+ + L N P IP ML
Sbjct: 182 -------------KYADDIETAYNFHPDLGYIAENLMMGNINELLNAGP-VPLIPFKVML 227
Query: 437 AKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVVLA 496
A+ + +S+I NK + EYKYDG R Q+H+L+ G ++I+SR E T FPD+V
Sbjct: 228 AERLQSISDIRNKMGH-NASYEYKYDGLRTQLHFLK-GGIKIFSRGLEETTSSFPDIVQN 285
Query: 497 VSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--KVDVCIYAFDI 554
S S ++D E V Y+ E ++ PFQ +S R + L++ +V + ++ FDI
Sbjct: 286 FKSYY--SFDSCIIDGESVPYNPETGELYPFQMVSKRRGRKYELTEKTREVPIVMFIFDI 343
Query: 555 LYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGL 614
LY NG+ L+ RR L +F+E +F+ A + S D +I KF + +++ CEG+
Sbjct: 344 LYLNGKSLVNLPYPERRSILEKNFKENE-YFKLAKRIVSDDEHDIMKFFERSIEEGCEGI 402
Query: 615 IIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLAC 674
+ K+ D+ Y R W+K K+DY + DSLDLV + AF G G+R G +GA LLAC
Sbjct: 403 VAKSNGIDSIYRAGARGWLWIKFKRDYQSELSDSLDLVVVGAFDGHGRRKGTFGALLLAC 462
Query: 675 YDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPT 731
Y+S ++ F+++CK+G+GF++ ML E L K++ K +P R ++ PD W P+
Sbjct: 463 YNSKDDTFETVCKLGSGFTDEMLSEMPRLLGDKIVEK-KP-ARVNSSMEPDHWIYPS 517
>sp|Q979A1|DNLI_THEVO DNA ligase OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299
/ JCM 9571 / NBRC 15438 / GSS1) GN=lig PE=3 SV=1
Length = 588
Score = 282 bits (721), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 295/550 (53%), Gaps = 42/550 (7%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+ F ++ F+ +S T R +T+I+ +L++ EDL +VYL K+AP ++G+E
Sbjct: 1 MKFSLVTDAFEKMSKTTKRTELTEILVELLKS----ADEDLQSLVYLIEGKLAPDYQGIE 56
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAK---ASRSSQSMMRKPDPLTITK 307
+ D IIKAL+ E V + Y ++GD+G VA+ A ++ +S++ + LT+
Sbjct: 57 TQMSDKLIIKALSIVSNIPEEAVSETYSKLGDIGSVAREIAAKKNMRSLVN--EDLTVKY 114
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
V DT +AK +G S + + + L ++ T + Y+ R++ KLRIG+++ T+L A+
Sbjct: 115 VHDTLMRMAKTSGSGSTKARIDAYVDLALSGTPADLMYITRIITGKLRIGVSDATILDAI 174
Query: 368 GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSF- 426
A +E++S+ N + + I Q+ + NL + +
Sbjct: 175 -ILAFSDEKYSEEIENAYNFHPDLGYIAVQL-----------------RLGNLESVINMG 216
Query: 427 -TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC--EYKYDGERAQIHYLEDGSVEIYSRNA 483
TP +P MLA+ + V EIV K M C EYKYDG R +IH + D V ++SR
Sbjct: 217 PTPMVPFKVMLAERLRSVDEIVQK---MNGKCAFEYKYDGMRTEIHIV-DEKVRLFSRGN 272
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E TG+FPD+V + + V S +LD E V Y+ E ++ PFQ +S R + L +
Sbjct: 273 EETTGQFPDIVKSAK--ETFHVSSVILDGEAVPYNPETGELYPFQVISQRRGRKYDLDKV 330
Query: 544 --KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
++ + ++ FDI+Y NG+ L + RR L F+E F + A + S D I K
Sbjct: 331 SNEIPITVFLFDIVYINGKDLSKTPYAERRRILEGLFKENDNF-KLAKRIVSSDTGTITK 389
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
F + A++ CEGL+ K+M D+ Y+ R W+KLK+DY + D++DL + AF G G
Sbjct: 390 FFNQAIEDGCEGLVAKSMADDSYYKAGARGWLWIKLKRDYQAQLWDTIDLTVVGAFMGHG 449
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT 721
+R+G YGA LLA Y+ N+ F+++CK+G+GF++ +L ++ + K +P R T
Sbjct: 450 RRSGTYGALLLATYNEKNDTFETVCKLGSGFTDDVLFSLPKRF-AEFVSKEKP-ARVVST 507
Query: 722 ISPDVWFEPT 731
I PDVW P+
Sbjct: 508 IEPDVWIYPS 517
>sp|Q9YD18|DNLI_AERPE DNA ligase OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 /
JCM 9820 / NBRC 100138 / K1) GN=lig PE=3 SV=2
Length = 602
Score = 281 bits (719), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 187/558 (33%), Positives = 293/558 (52%), Gaps = 40/558 (7%)
Query: 226 TTPEDLVPVVYLAANKIAPAHEGL-ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLG 284
T P + VVYL K+ P +GL ELG+G+ ++KA+A A TE V++ Y+ +GDLG
Sbjct: 33 TPPGAIGIVVYLIQGKLGPDWKGLPELGVGEKLLVKAIALAYKATEERVERLYKSVGDLG 92
Query: 285 LVAKA------SRSSQS------MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIK 332
VA+ SR++++ M + LT+ +V++T IA G+ S++ K +
Sbjct: 93 SVAERLSREYRSRAARAVTLEAFMAGGGEALTVRRVYNTLYRIAMAQGEGSRDIKLRLLA 152
Query: 333 ALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAA 392
LL A E +Y++R ++ +LR+G+ + T+L AL A H++P
Sbjct: 153 GLLADAEPVEAKYIVRFVEGRLRVGVGDATVLDALAMA-FGGGAHARP------------ 199
Query: 393 KIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQD 452
++++ +++ I + +GV L G+PI PMLA+ + +EI+ K
Sbjct: 200 -VIERAYNLRADLGYIAEVVAREGVDALRGVKPQV-GVPIRPMLAERGRDPAEILRKVGG 257
Query: 453 MEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV-LAVSRLKKPSVRSFVLD 511
EYKYDGERAQIH +DG V IYSR E T FPDVV +A LK +++
Sbjct: 258 -RAVVEYKYDGERAQIHK-KDGEVYIYSRRLENITRMFPDVVEMARKGLKAGEA---IVE 312
Query: 512 CEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVR 570
EIVA D + +I PFQ L R RK ++ +V V ++ FD LY +G+ L + L R
Sbjct: 313 GEIVAVDPDNYEIQPFQVLMQRKRKHDIHRVMREVPVAVFLFDALYVDGEDLTSKPLPER 372
Query: 571 REHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKR 630
R L + E P ++ A ++ + D +E+ F A++ EG+++K + RD+ Y R
Sbjct: 373 RRRLKEIVVETP-LWRLAESIETSDPEELWTFFLKAIEEGAEGVMVKAVHRDSVYTAGVR 431
Query: 631 SLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGT 690
W+KLK+DY + D++DLV + AF+GRGKR G + L+A YD + + F ++CK+ T
Sbjct: 432 GWLWVKLKRDYKSEMMDTVDLVVVGAFYGRGKRGGKLSSLLMAAYDPDRDVFPTVCKVAT 491
Query: 691 GFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTERPETSNSPASIVYDSQIT 750
GF++ L+ + L+ +IP+ P R I PDVW EP E A + T
Sbjct: 492 GFTDEELDRMNEMLKKHIIPRKHP--RVESRIEPDVWVEPALVAEILG--AELTLSPMHT 547
Query: 751 CLPSSYMPFSRSYFRFGR 768
C ++ P RF R
Sbjct: 548 CCLNTVRPGVGISIRFPR 565
>sp|O93723|DNLI_PYRAE DNA ligase OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM
7523 / JCM 9630 / NBRC 100827) GN=lig PE=3 SV=2
Length = 584
Score = 280 bits (716), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 188/575 (32%), Positives = 295/575 (51%), Gaps = 46/575 (8%)
Query: 203 ISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGDASIIKAL 262
I T R + ++ ++ + + +PE++ +VY + P EG+ELG+ + ++A+
Sbjct: 13 IEATTQRTTMVKLLVSLFK---KASPEEVGKIVYFILGDLRPPWEGVELGVAEKLCLRAV 69
Query: 263 AEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD--------PLTITKVFDTFRL 314
++A G S ++ Y++ GD+G +A+R + + ++P PL +++V+DT
Sbjct: 70 SKATGAAVSELEALYKKTGDVG---EAARRALAASKRPGLLAFGSQKPLEVSEVYDTLLK 126
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
+A+ G+ +Q+ K + +L AT E +Y+ R + KLR+G+A+ T++ AL A N
Sbjct: 127 VARATGEGAQDMKVALLSSLFARATPEEGKYIARFVVGKLRLGVADMTIIEALSDAYGVN 186
Query: 375 EQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPIGP 434
++ + +I L ++ K V P+ E TPG+P+ P
Sbjct: 187 KEALEKAYHIYPDL---GRLAKHVAEGKPLDE-----------------IRITPGVPVLP 226
Query: 435 MLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPDVV 494
MLA+ SEI+ K CEYKYDGERAQIH L G V+I+SR E T +PDVV
Sbjct: 227 MLAQRLSSASEILAKLGGSAI-CEYKYDGERAQIH-LTPGGVKIFSRRLEDITHAYPDVV 284
Query: 495 LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV-DVCIYAFD 553
AV + S + +L+ EIVA D + +LPFQ L R RK+ + +++ +Y FD
Sbjct: 285 KAVK--EAVSAKEAILEGEIVAVDPDTGDMLPFQELMHRKRKHDVATAVELYPTVLYLFD 342
Query: 554 ILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDASCEG 613
+LY +G+ L +E L RR L + E A + + + F +V EG
Sbjct: 343 VLYVDGEDLTEEPLIYRRVRLSEIVCETDKV-SIAKWRIFDNAEAVDVFFHESVSMGTEG 401
Query: 614 LIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLA 673
LI K+ + YE R NW+K K+DY + D++DLV + AFHGRGKR G+YGAFLLA
Sbjct: 402 LICKS--PSSIYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLA 459
Query: 674 CYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTER 733
YD + + F ++CK+G+GF++A L++ L+ IP P R + DVWF P
Sbjct: 460 AYDPSTDMFYTVCKVGSGFTDADLKKMYEILQPFKIPHRHP--RVVSKMEADVWFVPQVV 517
Query: 734 PETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
E A I TC + P RF R
Sbjct: 518 IEVIG--AEITLSPLHTCCLGAVRPGVGLAVRFPR 550
>sp|Q9HJ26|DNLI_THEAC DNA ligase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM
1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=lig PE=3
SV=1
Length = 588
Score = 278 bits (712), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 292/548 (53%), Gaps = 44/548 (8%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F ++ F+ + + T R+ +TD++ N+L+ +DL ++YL K+ P + G+E
Sbjct: 3 FSVVADAFEKMESTTKRLELTDLLVNLLKEA----DDDLPLLIYLLEGKLGPDYLGIETQ 58
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA---SRSSQSMMRKPDPLTITKVF 309
+ D IIKAL+ A +E + K+Y + GD+G +AK RS +S+++ + +T+ +
Sbjct: 59 MSDKLIIKALSVASNISEDEIAKEYAKAGDIGTIAKEIAEKRSLRSLVQ--EEMTVKYIH 116
Query: 310 DTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ 369
DT +A+ G S + + + L + +T E Y+ R++ KLRIG+++ T+L A+ +
Sbjct: 117 DTLMKMARTTGSGSTKARVDAYMDLFLNSTPKEIMYITRIITGKLRIGISDATILDAIVK 176
Query: 370 AAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALL---TDGVWNLSNTCSF 426
A +E++S+ ++ F+ P I L D + L T
Sbjct: 177 AFA-DEKYSED--------------IENAFNFHPDLGYIASELRKGNIDAILKLGPT--- 218
Query: 427 TPGIPIGPMLAKPTKGVSEIVNKFQDMEFTC--EYKYDGERAQIHYLEDGSVEIYSRNAE 484
P IP MLA+ + V EI+ K M C EYKYDG R + H +E G V ++SR E
Sbjct: 219 -PMIPFKVMLAERLRSVEEILEK---MGGRCAFEYKYDGMRTETH-IERGKVRLFSRGNE 273
Query: 485 RNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI- 543
T +FPD+ A S K V S +LD E V YD + ++ PFQ +S R + L +
Sbjct: 274 ETTNQFPDITKAASETFK--VDSAILDGEAVPYDPDTGELYPFQVISHRRGRKYDLDKVS 331
Query: 544 -KVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
++ + ++ FDI+Y NG+ L + RR+ L F E F + A + S D E+ +F
Sbjct: 332 SEIPITVFLFDIVYLNGRDLSKTPYTERRKILESIFTESDSF-RLAKRIESGDPAEVHRF 390
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
++A++ CEGL+ K+ D+ Y+ R W+KLK+DY + D+LDL + AF+G G+
Sbjct: 391 FNSAIEDGCEGLVAKSTSPDSFYKAGARGWLWIKLKRDYQAQLWDTLDLTVVGAFYGHGR 450
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G YGA LLA Y+ N+ F+++CK+G+GFS+ +L + + K +P R +
Sbjct: 451 RKGTYGALLLATYNDKNDTFETVCKLGSGFSDDVLFSLPKKF-EQYVSKEKP-ARVISNL 508
Query: 723 SPDVWFEP 730
PDVWF P
Sbjct: 509 EPDVWFYP 516
>sp|A1RY72|DNLI2_THEPD DNA ligase 2 OS=Thermofilum pendens (strain Hrk 5) GN=lig2 PE=3
SV=1
Length = 601
Score = 275 bits (704), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 292/549 (53%), Gaps = 34/549 (6%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLE 250
+P+ L+ ++ I + + R+ +TD + + + +T PE + VVYL ++ P +EG+E
Sbjct: 7 LPYSVLADFYERIESTSSRLAMTDYLVALFK---KTPPEVIDKVVYLTQGQLRPDYEGVE 63
Query: 251 LGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSS--QSMMR------KPDP 302
LG+ + ++ALA+A GR V+ Y++ GD+G VA+ ++ ++ +
Sbjct: 64 LGVAEKLALRALAKASGRHLKDVEDLYKKTGDIGAVAEKLLTAPGGGLLEFFGTPVQKKE 123
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LT+++V+ IA+ +G+ +QE K N + ALL A E +Y++R + +LR+G+A+ T
Sbjct: 124 LTVSQVYSALMKIAQASGEGAQETKVNTLVALLQDAKPKEARYILRTVLGRLRLGIADMT 183
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL A ++ ++++ ++ P I L T G+ +
Sbjct: 184 ILDALAAAFAGSKAARD--------------VIERAYTKHPDLGYIAKLLATKGL-DAVA 228
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
+ GIP+ PMLA+ +EI+ K + EYKYDGER Q H D V ++SR
Sbjct: 229 SLKIEVGIPVLPMLAERLSDPAEILEKLGG-KCLAEYKYDGERVQAHKSGD-KVLLFSRR 286
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLS 541
E T +PDVV V RLK VR +++ EIVAY+ + ++LPFQ L R RK +V +
Sbjct: 287 LENITHHYPDVVEYVKRLK---VREAIVEGEIVAYNPDTGEMLPFQELMHRRRKYDVEKA 343
Query: 542 DIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
+ V +Y FD++Y +G+ L+++ L RR L E +T D ++
Sbjct: 344 MKEYPVRVYLFDVIYMDGEELIEKPLDQRRLILEKIVPEGDEDILLSTAKVVGDAKDLLH 403
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
F + A+ CEG++ K++ + Y+ R W+K K+DY + D++DLV + FHGRG
Sbjct: 404 FFEQAISEGCEGVMCKSIGPGSIYQMGARGWLWIKFKRDYRMEMTDTVDLVVVGGFHGRG 463
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT 721
KR G YGA L+A YD + F+++CK+GTGF++ L + L IP P R
Sbjct: 464 KRAGTYGALLMAAYDPETDTFKTVCKVGTGFTDEDLAKLPELLDPYKIPHRHP--RVFSK 521
Query: 722 ISPDVWFEP 730
I DVWF P
Sbjct: 522 IEADVWFVP 530
>sp|Q02093|DNLI_ACIAM DNA ligase OS=Acidianus ambivalens GN=lig PE=3 SV=1
Length = 600
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 176/577 (30%), Positives = 307/577 (53%), Gaps = 42/577 (7%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++ + +T + VVY+ K+ P G+ EL
Sbjct: 3 FKIIAEYFDRLEKISSRLQLTSLLADLFK---KTDKNVIDKVVYIIQGKLWPDFLGMPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA---KASRSSQSMM------RKPDP 302
GIG+ +I+AL+ A ++ ++K Y+ +GDLG VA K + S S++ + P
Sbjct: 60 GIGEKFLIRALSIATSVSDDEIEKMYKSVGDLGQVAFDIKQKQQSASILAFLGAQKASKP 119
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
LT+ KV+D +A G+ S++ K + LL A+ E +YL+R + +LR+G+ + T
Sbjct: 120 LTVEKVYDDLAKVATSTGEGSRDIKIRLLAGLLKDASPLEAKYLVRFVDGRLRVGIGDAT 179
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL Q+ +P IV++ +++ I L G+ L N
Sbjct: 180 ILDALA-ITFGGGQNFRP-------------IVERAYNLRADLGNIAKILANGGIEQLKN 225
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
PGIPI PMLA+ +E+++K ++ +YKYDGER QIH D + I+SR
Sbjct: 226 IKP-QPGIPIRPMLAERLSDPAEMLSKVGNIAL-VDYKYDGERGQIHKAGD-KIFIFSRR 282
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
E T ++PDV +S+ K + F+++ EI+ D E ++ PFQ L R RK+
Sbjct: 283 LENITNQYPDVAEYISKYVKGN--EFIVEGEIIPVDPETGEMRPFQELMHRKRKSDIHEA 340
Query: 543 IK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
IK V ++ FD++Y G+ + L RR+ L +S E+ + AT + + +++++++
Sbjct: 341 IKEYPVNVFLFDLMYYEGEDYTVKPLSERRKKL-ESIVEDNDYVHIATHIITDNVEKLKE 399
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
F A+ EG+++K++ DA Y+ R W+K K+DY + D++DLV + AFHG+G
Sbjct: 400 FFYQAISEGAEGVMVKSLAPDAIYQAGSRGWLWIKFKRDYQSEMADTVDLVMVGAFHGKG 459
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKV--IPKPRPYYRFA 719
++ G Y +FL+A Y+ + + F+++CK+ +GF++A L++ L+ K+ + + P+ R
Sbjct: 460 RKGGKYSSFLMAAYNPDKDVFETVCKVASGFTDAELDD----LQKKIAELKRDTPHPRVV 515
Query: 720 DTISPDVWFEPTERPETSNSPASIVYDSQITCLPSSY 756
T+ PDVW P E A I TC Y
Sbjct: 516 STMVPDVWLTPALVAEIIG--AEITISPLHTCCKDQY 550
>sp|A3DP49|DNLI_STAMF DNA ligase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1) GN=lig PE=3 SV=2
Length = 597
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 190/556 (34%), Positives = 303/556 (54%), Gaps = 41/556 (7%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+PF L+ F+ I T R +T ++ N+ + +T PE + VVYL ++ P +GL
Sbjct: 1 MPFRELADTFERIEIITSRTQMTVLLVNLFK---KTPPEIIDKVVYLLQGRLWPDWKGLP 57
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA------------KASRSSQSMM 297
ELG+G+ +IKA+A A TES V+ Y+ +GDLG A K + S + +
Sbjct: 58 ELGVGEKMLIKAIALATQSTESEVESLYKSLGDLGKAAEKLKAIYEEKLKKGAMSILAFV 117
Query: 298 RKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIG 357
LT+++V++T +A G+ S++ K + LL A+ E +Y+IR ++ +LR+G
Sbjct: 118 PVKRELTVSQVYETLSRVALATGEGSRDIKLKLLAGLLSDASPKEAKYIIRFVEGRLRLG 177
Query: 358 LAEQTLLAALGQAAVYNE-QHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDG 416
+ + T++ AL A VY H++P IV++ +++ I L T G
Sbjct: 178 IGDATIMDAL--AIVYGGGAHARP-------------IVERAYNLRADLGHIAKILATQG 222
Query: 417 VWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSV 476
+ N GIPI PMLA+ EI+ K + F EYKYDGERAQIH L D +
Sbjct: 223 L-NALKGIKPQVGIPIRPMLAERLNNPVEILKKVGGIAF-VEYKYDGERAQIHKLGD-KI 279
Query: 477 EIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK 536
IYSR E T ++PDVV + K + +++ EIVAYD + ++ PFQ L R RK
Sbjct: 280 WIYSRRLENITHQYPDVVDYARKYIKAN--EAIVEGEIVAYDPDTGELRPFQELMHRKRK 337
Query: 537 -NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
++ ++ +V V +Y FD+LY +G+ + L RR L + E+ F Q A + + +
Sbjct: 338 HDIHIAIKEVPVKVYLFDLLYVDGEDYTLKPLPERRAKLVEIIEQTETF-QIAEYIRTNN 396
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
DE++KF A++ EG++IK + ++A Y+ R W+K K+DY + D++DLV I
Sbjct: 397 PDELEKFFLKAIEDGAEGVMIKALHKNAIYQAGTRGWLWIKYKRDYKSEMIDTVDLVVIG 456
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
AF+GRG+R G YGA L+A Y+ + + F+S+CK+G+GF + +++ L+ +I P
Sbjct: 457 AFYGRGRRGGKYGALLMASYNPDKDVFESVCKVGSGFKDEDIDKLPEMLKPYIIEHKHP- 515
Query: 716 YRFADTISPDVWFEPT 731
R + PDVW P
Sbjct: 516 -RVVARMKPDVWVTPA 530
>sp|A9A3K1|DNLI_NITMS DNA ligase OS=Nitrosopumilus maritimus (strain SCM1) GN=lig PE=3
SV=1
Length = 588
Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/546 (32%), Positives = 292/546 (53%), Gaps = 37/546 (6%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVP-VVYLAANKIAPAHEGL 249
+ F L+ F+ + + R+ +T + + + TP++++ +VYL K+ P EG+
Sbjct: 1 MEFSILADSFNKMESTRKRLELTQYLVELFKK----TPQEVISKIVYLLQGKLRPDFEGV 56
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITK 307
ELG+ + I+A++++ G ++++Y++ GDLG A + +Q+ D +T+ +
Sbjct: 57 ELGVAEKLAIRAISKSSGIPIKKIEEEYRKGGDLGHAATTILEQKTQTTFLVED-ITVER 115
Query: 308 VFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAAL 367
V++T IAK G SQ+ K I +LL A+ E +++++L LR+G+AE T++ AL
Sbjct: 116 VYETLFKIAKLEGNRSQDMKMKYISSLLNDASPLEASFILKILLGTLRLGIAENTVMDAL 175
Query: 368 GQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFT 427
A N+++ K I++ ++V K+ L T+G L+ F
Sbjct: 176 ALAFSGNKENRK--------------ILEHAYNVSSDLGKVAEVLATEG---LAEVEKFK 218
Query: 428 PGI--PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAER 485
+ PI PMLA K E + K + EF EYK DGER Q+H +E V ++SR+ E
Sbjct: 219 IILFNPIRPMLADRVKSEQEAIEKMGN-EFAAEYKLDGERVQLH-IEGDKVVLFSRSLEN 276
Query: 486 NTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIK 544
+ +PD++ + K + VL+ E VA + + LPFQ L R RK + + +
Sbjct: 277 ISSYYPDIIEKIP--KTIQAENIVLEAEAVAINENTGEFLPFQELMHRRRKYKIEKAVTQ 334
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + FDILY NG+ L+ + RRE + + +E F + + ++I+ F +
Sbjct: 335 YPITVNLFDILYCNGKSCLELDYKERREKM-EKVVKEDDFVKHIPMAIVKNENDIEDFFE 393
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
+++A EGL++KT+ + Y+ R +WLKLK++Y +GDSLDLV I F G+G+RT
Sbjct: 394 NSINAGSEGLMLKTLV--SPYQAGSRGSHWLKLKREYQNELGDSLDLVVIGGFFGKGRRT 451
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
G YG LLA Y+ + + F SICK+GTGFS+ L++ L KV K P R +
Sbjct: 452 GNYGTLLLATYEEDEDTFTSICKVGTGFSDEDLDQLYQILNPKVTIKKNP--RINSEMEA 509
Query: 725 DVWFEP 730
DVWFEP
Sbjct: 510 DVWFEP 515
>sp|Q4JAM1|DNLI_SULAC DNA ligase OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=lig PE=3
SV=1
Length = 598
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 299/555 (53%), Gaps = 45/555 (8%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLV-PVVYLAANKIAPAH-EG 248
+ F ++ FD + + RI +T ++ ++L+ + +D++ V+Y+ K+ P E
Sbjct: 1 MEFKLIAEYFDRLEKISSRIQLTALLTDLLKK----SDKDVIDKVIYITQGKLWPDFFEK 56
Query: 249 LELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA---KASRSSQSMMR-----KP 300
E+G+G+ +IKAL+ + E ++KQ + +GDLG VA K + SSQ+++ K
Sbjct: 57 PEIGLGEKLMIKALSVSTNIKEDEIEKQLRILGDLGEVAYKLKRTNSSQNVLSYLGSTKV 116
Query: 301 DPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAE 360
LT+ +V+++ IA G+ S++ K + LL A E +Y+IR + +LR+G+ +
Sbjct: 117 TKLTVEEVYESLSKIALSEGEGSRDMKIRSLAGLLKKADPLEAKYIIRFIDGRLRVGIGD 176
Query: 361 QTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNL 420
T++ AL A V+ + P ++++ +++ I L +G+ +
Sbjct: 177 ATIMDAL--ANVFGGGTAARP------------LIERAYNLRADLGNIAKLLAENGIETI 222
Query: 421 SNTCSFTP--GIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
S P GIPI PMLA+ SEI+ K + +YKYDGERAQIH + V I
Sbjct: 223 K---SIKPEVGIPIRPMLAERLTDPSEILAKVGG-KGIVDYKYDGERAQIHK-KGEKVYI 277
Query: 479 YSRNAERNTGKFPDVVLAVSRLKKPSVRS--FVLDCEIVAYDREKQKILPFQTLSTRARK 536
+SR E T ++PDVV + K S++S +L+ EIVA D+E +ILPFQ L R RK
Sbjct: 278 FSRRLENITRQYPDVVEYI----KNSIKSNEVILEGEIVAIDKESGEILPFQNLMHRKRK 333
Query: 537 NVSLSDIK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSID 595
N IK V +Y FD++Y +G+ Q+ L RRE L + + + A
Sbjct: 334 NDIGEAIKEYPVNVYLFDLMYNDGEDYTQKPLPDRREKL-EEIVTQNDIVKVADHKYIDK 392
Query: 596 LDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIA 655
++E+ ++ A+ EG+I+K++ +D+ Y+ R W+KLKKDY + DS+DLV +
Sbjct: 393 VNELVEYFHQAISDGTEGVIVKSIGKDSIYQAGARGFLWIKLKKDYQSEMADSVDLVIVG 452
Query: 656 AFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPY 715
AF+GRGKR G + L+A YD + + F ++CK+ +GFS+A LEE L + K P
Sbjct: 453 AFYGRGKRGGKLSSLLMAAYDPDKDTFYTVCKVASGFSDAELEEVQKMLSEAKLDKKDP- 511
Query: 716 YRFADTISPDVWFEP 730
R I PD+W +P
Sbjct: 512 -RVESEIQPDIWVKP 525
>sp|A0RWD6|DNLI_CENSY DNA ligase OS=Cenarchaeum symbiosum (strain A) GN=lig PE=3 SV=2
Length = 589
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 286/544 (52%), Gaps = 37/544 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELG 252
F L+ + + + R+ +T I+ +LR ET E + +VYL K+ P EG+ELG
Sbjct: 3 FSVLAGSLEKMESTAKRLELTGILEELLR---ETPHEVIAQIVYLIQGKLRPEFEGIELG 59
Query: 253 IGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKA--SRSSQSMMRKPDPLTITKVFD 310
+ + ++A++++ G + ++ Y+ GDLG A + + +Q+ + +T+ +V+D
Sbjct: 60 VAEKLAVRAVSKSSGMPAARIEAAYRRDGDLGRAASSILEQKTQTTF-LAEEITVERVYD 118
Query: 311 TFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA 370
T IA+ G SQ+ K I +LL A+ + Y+++L+ LR+G+AE T++ AL A
Sbjct: 119 TLMRIARLEGARSQDMKMRHISSLLNDASPRDACYILKLILGTLRLGIAENTVMDAL--A 176
Query: 371 AVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
A + S P +++ ++V ++ A+ + G L F +
Sbjct: 177 AAFTGSKSNRPE------------LERAYNVSSDLGRVAEAVSSGG---LEAVRGFAVAV 221
Query: 431 --PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTG 488
PI PMLA + SE + K EYK DGER Q+H L G VE++SR+ E T
Sbjct: 222 FSPIRPMLADRVRSESEALEKM-GAGLAAEYKLDGERVQVH-LSGGRVELFSRSLENITA 279
Query: 489 KFPDVVLAV-SRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVD 546
+PD+V + RL+ R VL+ E VA + E + LPFQ L R RK ++ + ++
Sbjct: 280 YYPDIVERIPGRLR---AREAVLEAEAVAVNEETGEFLPFQELMHRRRKYDIDKAVMRYP 336
Query: 547 VCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAA 606
+ + FDILY +G+ L RR L + +E F + T D ++ L+ +
Sbjct: 337 ITVNFFDILYLDGRDCLGISYSERR-ALLEGVVDEDSFARCVPVSTIPDESALEDSLENS 395
Query: 607 VDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGV 666
++A CEGL++K D A Y R WLKLK++Y +GDSLDLV I AF G+G+RTG
Sbjct: 396 INAGCEGLMLKLPD--APYRAGSRGGYWLKLKREYRNELGDSLDLVIIGAFFGKGRRTGR 453
Query: 667 YGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
YG LLA YD + + F SICK+GTGF++ L++ L +V K P R + DV
Sbjct: 454 YGTLLLATYDDSRDTFPSICKVGTGFTDEDLDQLYQLLSPRVTLKRNP--RIDSGMEADV 511
Query: 727 WFEP 730
WF+P
Sbjct: 512 WFDP 515
>sp|A8AB20|DNLI_IGNH4 DNA ligase OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 /
JCM 14125) GN=lig PE=3 SV=1
Length = 594
Score = 259 bits (662), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 294/578 (50%), Gaps = 36/578 (6%)
Query: 200 FDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-ELGIGDASI 258
+ + T R I I+ N+ + V+E + + VVY K+ P G E+GIG+ I
Sbjct: 10 LERLERTTSRTQIVAILTNLFKKVIEENKDIIDKVVYFIQGKLWPDWYGYPEIGIGEKGI 69
Query: 259 IKALAEACGRTESHVKKQYQEMGDLGLVA-----KASRSSQSM-MRKPDPLTITKVFDTF 312
IKA++ A E V+ Y+++GDLGLVA KA + M ++K + LT KV++T
Sbjct: 70 IKAISLAANVKEKEVEGLYKQLGDLGLVAERLMAKAPKGGLMMFVKKKEELTFEKVYETL 129
Query: 313 RLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV 372
+ IA G+ S++ K + LL A+ E +Y++R +Q KLR+G+ + +++ AL A
Sbjct: 130 KRIAFMQGEGSRDLKIKTLAGLLKEASPKEAKYIVRFVQGKLRLGVGDASIIEALAHVAG 189
Query: 373 YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIPI 432
+ + N+++ L AKI +T+G L PG+P+
Sbjct: 190 TTKDVVERAYNLRADLGAVAKIA-----------------VTEGPEALKRVRP-KPGVPV 231
Query: 433 GPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFPD 492
PMLA+ EI+ K EYKYDGERAQIH L DG V I+SR E T +PD
Sbjct: 232 RPMLAERLNDPKEILKKLGGKGL-AEYKYDGERAQIHLLPDGKVVIFSRRLENITRSYPD 290
Query: 493 VV-LAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIY 550
VV A S LK + +++ EI+A + E + PFQ L R RK +V+L+ ++ V +
Sbjct: 291 VVQYAKSGLK---AKEAIVEGEIIAVNPETGEPRPFQELMRRRRKHDVALAMSEIPVNVK 347
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
FDI+Y +G+ + + L +RR+ L + EE F L S +E+++F ++
Sbjct: 348 LFDIIYVDGEDMTNKPLPLRRKRLEEVVEESEEFSLSTAKLVSTP-EELEQFFHQSISEG 406
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
EGL++K + + Y+ R W+K KKDY + + +DLV + AF+GRG+R G +GA
Sbjct: 407 HEGLVVKAVHDKSVYQAGARGWLWIKYKKDYKSEMVEPVDLVVVGAFYGRGRRGGTFGAL 466
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
L+A YD + F ++CK+G+GFS+ L R L I + +P R + PDVW P
Sbjct: 467 LVAGYDEKRDAFATVCKVGSGFSDEEL-ARLPELLKPYISETKP-PRVISNVKPDVWVRP 524
Query: 731 TERPETSNSPASIVYDSQITCLPSSYMPFSRSYFRFGR 768
E A I TC S RF R
Sbjct: 525 ALVAEIIG--AEITLSPIHTCAKDEVSAGSGLAIRFPR 560
>sp|Q8TSR7|DNLI1_METAC DNA ligase 1 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM
2834 / JCM 12185 / C2A) GN=lig1 PE=3 SV=1
Length = 580
Score = 257 bits (656), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 267/522 (51%), Gaps = 45/522 (8%)
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL I PA E LGI D + +A+A A G +E VKK+Y GDLG VA +
Sbjct: 44 YLFLGSIGPAFENTTLGIKDRLVTRAIAGAYGVSEEEVKKRYARAGDLGDVA-----FEL 98
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
++ LTI +VF R I + +GK SQEKK + +L AT E +Y+IR++ +LR
Sbjct: 99 SKKREASLTIEEVFKRLRQIKEASGKGSQEKKTGLLSDILQKATPEEGKYIIRIVLGRLR 158
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTD 415
+G +Q LL A A +++H A KI K+ +SV ++ L
Sbjct: 159 LGFGDQFLLEAFSIAFTGDKKH-------------AGKI-KESYSVCTDIGELAQTLAEH 204
Query: 416 GVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS 475
G S PG P+ MLA+ + E+ + + + E KYDGER QIH D
Sbjct: 205 GA-GAPGYFSIKPGRPVKSMLAQRVESFEELEERIKGKK-AAEEKYDGERVQIHKAGD-E 261
Query: 476 VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY---DREKQKI---LPFQT 529
++ +SR E T ++PD++ AV + S + VLD EIVAY ++E +I PFQ
Sbjct: 262 IKAFSRRLEDITAQYPDIIEAVR--ESISADTIVLDGEIVAYAELEKENTRIEEFYPFQN 319
Query: 530 LSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR----EHLYDSFEEEPGF 584
L R RK V K V ++ FDILY NG+ LL++ RR EH+ S G
Sbjct: 320 LMQRRRKYEVEKYREKCPVAVFFFDILYLNGESLLKKTYPERRALLEEHVNGS-----GI 374
Query: 585 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIES 644
+ +++E++ F + V+ EG++ K+M ++ YE KRS WLK K++Y E
Sbjct: 375 VHLTRRTVTENIEELEDFFNETVEKGLEGIVAKSMSSNSVYEAGKRSWLWLKWKQEYSEG 434
Query: 645 IGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSL 704
+ ++ DLV + +++G+GKR G +GA L A + ++F++ K+GTGF+EA EE +S L
Sbjct: 435 MRETFDLVVVGSYYGKGKRKGSFGALLCAVLNEEEQQFETFTKVGTGFTEADAEEINSLL 494
Query: 705 RSKVIPKPRPYYRFADTISPDVWFEPTE-----RPETSNSPA 741
+ + + + PD++ EP E +NSP
Sbjct: 495 SAHTVSEAPKNVIIKKGMLPDIFIEPAVVIEVLGSEITNSPG 536
>sp|A4YD25|DNLI_METS5 DNA ligase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348)
GN=lig PE=3 SV=1
Length = 598
Score = 256 bits (653), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 171/562 (30%), Positives = 289/562 (51%), Gaps = 36/562 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + RI +T ++ ++ + T E + VVYL ++ P G+ E+
Sbjct: 3 FKLIAEYFDRLEKISSRIQLTSLLSDLFKN---TEREVIDKVVYLIQGRLWPDFTGMPEI 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM---------RKPDP 302
G+G+ +IKA+A A G E V+K Y+ +GDLG VA + RS + ++
Sbjct: 60 GMGEKFLIKAIAMAYGNKEEEVEKLYKNIGDLGEVAYSLRSKVKGVSILSFVGGNQEAGE 119
Query: 303 LTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQT 362
L + +V++ IA G+ S++ K L+ AT E +YL+R ++ +LR+G+ + T
Sbjct: 120 LDVMEVYNELVKIATSTGEGSRDIKIRIFAGLIKKATPIEAKYLVRFVEGRLRLGIGDAT 179
Query: 363 LLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSN 422
+L AL A + P IV++ +++ I + T+G+ L N
Sbjct: 180 VLDAL--AITFGGSADYRP------------IVERAYNLRADLGDIARVIATEGIEKLKN 225
Query: 423 TCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRN 482
S TPGIPI PMLA+ EI+ K +YKYDGERAQIH D V I+SR
Sbjct: 226 -ISPTPGIPIRPMLAERLPDPEEIMEKMNGKAL-VDYKYDGERAQIHRKGD-KVTIFSRR 282
Query: 483 AERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSD 542
E T ++ DV V + K +F+++ EIV D E ++ PFQ L R RKN
Sbjct: 283 MENITDQYIDVTEYVKQFVKGD--NFIVEGEIVPVDPESGEMRPFQELMHRRRKNNIAEA 340
Query: 543 IK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQK 601
IK V ++ FD+++ G+ + L RR L + A+ + + +D++++
Sbjct: 341 IKEYPVNLFLFDLMFFEGEDYTTKPLPERRAKLEEILASNDKV-HIASHIIADRVDKLRE 399
Query: 602 FLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRG 661
+ A+ EG+++K++ D+ Y+ R W+KLK+DY + D++DLV + AF+G+G
Sbjct: 400 YFYQAISEGAEGVMVKSIGPDSIYQAGSRGWLWIKLKRDYQSEMADTVDLVVVGAFYGKG 459
Query: 662 KRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADT 721
KR G + + L+A Y+ + F+++CK+ +GFS+ L+E + + + + + R
Sbjct: 460 KRGGKFSSLLMAAYNPEKDVFETVCKVASGFSDQELDEMQKKINE--LKREQKHPRVVSD 517
Query: 722 ISPDVWFEPTERPETSNSPASI 743
+ PDVW PT E + +I
Sbjct: 518 MIPDVWVSPTLVAEVIGAEITI 539
>sp|C0QSL7|DNLI_PERMH Probable DNA ligase OS=Persephonella marina (strain DSM 14350 /
EX-H1) GN=lig PE=3 SV=1
Length = 582
Score = 253 bits (647), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 279/540 (51%), Gaps = 36/540 (6%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ ++ ++ T RI +T + ++ + ET PE + VVYL+ +IAP + GL+ +
Sbjct: 6 LAQLYQILEETTSRIKMTQALVDLFK---ETPPELIDKVVYLSIGRIAPEYTGLDYNFSE 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPDP-LTITKVFDTFRL 314
S IKAL+ +E ++ Q + GDLG K + + KP+ LT+ +V+ T R
Sbjct: 63 KSAIKALSTVLNISEHDIQHQVLQTGDLGDAGKKLYEEKGV--KPEGILTVEEVYRTLRE 120
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAV-- 372
IA+ G S +KK LL A+ E +YL+R + +LR+G+ + T++ AL A
Sbjct: 121 IAQTTGYGSTKKKLQLFTELLKKASPLEVKYLLRTITERLRLGIGDNTIMDALSIAFTGK 180
Query: 373 -YNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIP 431
N + + NI S L A+I+ EK + D V N+ G P
Sbjct: 181 KENREIIERAYNISSDLGYVARILA---------EKGL-----DAVKNIK----IEIGRP 222
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFP 491
I PMLA+ S I+ K + EYKYDGER Q+H D + ++SR E T +FP
Sbjct: 223 IRPMLAERMAIPSYILKKLGG-KAGAEYKYDGERIQVHRKGD-TFYLFSRRLENITDQFP 280
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVD-VCIY 550
D++ LK+ +++ E V D I PFQ L R K V+ I + + +
Sbjct: 281 DLI---EFLKESIPEECIIELEAVVIDPSSGAIRPFQDLMNRRVKYVTRFHIMMYPIAGF 337
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
FDI+Y NG+ L + RR+ L ++ + + ++++++ F A++
Sbjct: 338 IFDIMYLNGEDLTLKPYPERRKILEENIKITERI-NLSERKIVDNVEDLESFFHQAIEDG 396
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
CEGL+ K++ +D+ Y+ KR W+K K+DY + D+LDLV + AF+G+G RTG +G+
Sbjct: 397 CEGLVCKSLQKDSIYQAGKRGFLWIKYKRDYKSHLADTLDLVVVGAFYGKGARTGYFGSL 456
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
L+ACYD ++F+++CK+GTGF E ++ L+ + P R +S D+W+EP
Sbjct: 457 LMACYDPETDQFKTVCKVGTGFKEDDFKKLDDLLKEHTLDHKHP--RVNSILSADIWYEP 514
>sp|Q980T8|DNLI_SULSO DNA ligase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617
/ JCM 11322 / P2) GN=lig PE=1 SV=1
Length = 601
Score = 253 bits (647), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 170/561 (30%), Positives = 290/561 (51%), Gaps = 35/561 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++L +T + VVY+ K+ P G EL
Sbjct: 3 FKVIAEYFDKLEKISSRLQLTALLADLLSKSDKTIID---KVVYIIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPDPL 303
GIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q + L
Sbjct: 60 GIGEKFLIKAISIATNTDENSVENLYKTIGDLGEVARRLKSKQQSTGILGFLGTTSKESL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
T+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ + T+
Sbjct: 120 TVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATV 179
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L A+ A + S A++I+++ +++ I ++ G+ L T
Sbjct: 180 LDAM--AIAFGGGQS------------ASEIIERAYNLRADLGNIAKIIVEKGIEAL-KT 224
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
GIPI PMLA+ EI+ K +YKYDGERAQIH ED + I+SR
Sbjct: 225 LKPQVGIPIRPMLAERLSNPEEILKKMGG-NAIVDYKYDGERAQIHKKED-KIFIFSRRL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T ++PDVV VS+ + + F+++ EIVA D E ++ PFQ L R RK+ I
Sbjct: 283 ENITSQYPDVVDYVSKYIEG--KEFIIEGEIVAIDPESGEMRPFQELMHRKRKSDIYEAI 340
Query: 544 K-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
K V ++ FD++Y + L RR+ L +S + + + A + + ++++++ F
Sbjct: 341 KEYPVNVFLFDLMYYEDVDYTTKPLEARRK-LLESIVKPNDYVKIAHHIQANNVEDLKSF 399
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+GK
Sbjct: 400 FYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGK 459
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R +
Sbjct: 460 RGGKISSLLMAAYNPKTDSFESVCKVASGFSDEQLDELQKKLME--IKRDVKHPRVNSKM 517
Query: 723 SPDVWFEPTERPETSNSPASI 743
PD+W EP E S +I
Sbjct: 518 EPDIWVEPVYVAEIIGSEITI 538
>sp|C3NF77|DNLI_SULIN DNA ligase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone
#2) GN=lig PE=3 SV=1
Length = 601
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/561 (29%), Positives = 288/561 (51%), Gaps = 35/561 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++L ++ + VVY+ K+ P G EL
Sbjct: 3 FKVIAEYFDKLEKISSRLQLTALLADLLS---KSDKAIIDKVVYIIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPDPL 303
GIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q + L
Sbjct: 60 GIGEKFLIKAISIATNTDENSVENLYKSIGDLGEVARRLKSKQQSTGILGFLGTSSKESL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
+ KV+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ + T+
Sbjct: 120 KVDKVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATV 179
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L A+ A + S A++IV++ +++ I ++ G+ L T
Sbjct: 180 LDAM--AIAFGGGQS------------ASEIVERAYNLRADLGNIAKIIVEKGIEAL-KT 224
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
GIPI PMLA+ EI+ K +YKYDGERAQIH +D + I+SR
Sbjct: 225 LKPEVGIPIRPMLAERLSNPEEILKKVGGSAL-VDYKYDGERAQIHK-KDDKIFIFSRRL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T ++PDVV +S+ + + F+++ EIVA D E +I FQ L R RK+ I
Sbjct: 283 ENITSQYPDVVEYISKYTEG--KEFIIEGEIVAVDPESGEIRSFQELMHRKRKSDIYEAI 340
Query: 544 K-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
K V ++ FD++Y + L VRR+ L +S + + + A + ++++++ F
Sbjct: 341 KEYPVNVFLFDLMYYEDVDYTTKPLEVRRK-LLESIVKPNDYVKIAHHIQVNNVEDLKSF 399
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+GK
Sbjct: 400 FYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGK 459
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R +
Sbjct: 460 RGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKM 517
Query: 723 SPDVWFEPTERPETSNSPASI 743
PD+W EP E + +I
Sbjct: 518 EPDIWVEPVYVAEIIGAEITI 538
>sp|Q9P9K9|DNLI_SULSH DNA ligase OS=Sulfolobus shibatae GN=lig PE=3 SV=1
Length = 601
Score = 246 bits (627), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 167/563 (29%), Positives = 288/563 (51%), Gaps = 35/563 (6%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+ F ++ FD + + R+ +T ++ ++L ++ + VVY+ K+ P G
Sbjct: 1 MEFKVIAEYFDKLEKISSRLQLTALLADLLS---KSDKAIIDKVVYIIQGKLWPDFLGYP 57
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPD 301
ELGIG+ +IKA++ A E+ V+ Y+ GDLG VA+ +S Q +
Sbjct: 58 ELGIGEKFLIKAISIATNTDENSVENLYKSTGDLGEVARRLKSKQQSTGILGFLGTSSKE 117
Query: 302 PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQ 361
LT+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ +
Sbjct: 118 SLTVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDA 177
Query: 362 TLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLS 421
T+L A+ A + S A++IV++ +++ I ++ G+ L
Sbjct: 178 TVLDAM--AIAFGGGQS------------ASEIVERAYNLRADLGNIAKIIVEKGIEAL- 222
Query: 422 NTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSR 481
T GIPI PMLA+ EI+ K +YKYDGERAQIH D + I+SR
Sbjct: 223 KTLKPEVGIPIRPMLAERLSNPEEILKKVGGSAL-VDYKYDGERAQIHKKSD-KIFIFSR 280
Query: 482 NAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLS 541
E T ++PDVV +S+ + + F+++ EIVA D E ++ FQ L R RK+
Sbjct: 281 RLENITSQYPDVVEYISKYVEG--KEFIIEGEIVAVDPESGEMRAFQELMHRKRKSDIYE 338
Query: 542 DIK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQ 600
IK V ++ FD++Y + L VRR+ L +S + + + A + ++++++
Sbjct: 339 AIKEYPVNVFLFDLMYYEDVDYTTKPLEVRRK-LLESIVKPNDYVKIAHHIQVNNVEDLK 397
Query: 601 KFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGR 660
F A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+
Sbjct: 398 SFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGK 457
Query: 661 GKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFAD 720
GKR G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R
Sbjct: 458 GKRGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNS 515
Query: 721 TISPDVWFEPTERPETSNSPASI 743
+ PD+W EP E + +I
Sbjct: 516 KMEPDIWIEPVYVAEIIGAEITI 538
>sp|C3N834|DNLI_SULIY DNA ligase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone
#1) GN=lig PE=3 SV=1
Length = 601
Score = 246 bits (627), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 288/561 (51%), Gaps = 35/561 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++L ++ + VVY+ K+ P G EL
Sbjct: 3 FKVIAEYFDKLEKISSRLQLTALLADLLS---KSDKAIIDKVVYIIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPDPL 303
GIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q + L
Sbjct: 60 GIGEKFLIKAISIATNTDENSVENLYKSIGDLGEVARRLKSKQQSTGILGFLGTSSKESL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ + T+
Sbjct: 120 KVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATV 179
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L A+ A + S A++IV++ +++ I ++ G+ L T
Sbjct: 180 LDAM--AIAFGGGQS------------ASEIVERAYNLRADLGNIAKIIVEKGIEAL-KT 224
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
GIPI PMLA+ EI+ K +YKYDGERAQIH +D + I+SR
Sbjct: 225 LKPEVGIPIRPMLAERLSNPEEILKKVGGSAL-VDYKYDGERAQIHK-KDDKIFIFSRRL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T ++PDVV +S+ + + F+++ EIVA D E ++ FQ L R RK+ I
Sbjct: 283 ENITSQYPDVVEYISKYTEG--KEFIIEGEIVAVDPESGEMRSFQELMHRKRKSDIYEAI 340
Query: 544 K-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
K V ++ FD++Y + L VRR+ L +S + + + A + ++++++ F
Sbjct: 341 KEYPVNVFLFDLMYYEDVDYTTKPLEVRRK-LLESIVKPNDYVKIAHHIQVNNIEDLKSF 399
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+GK
Sbjct: 400 FYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGK 459
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R +
Sbjct: 460 RGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKM 517
Query: 723 SPDVWFEPTERPETSNSPASI 743
PD+W EP E + +I
Sbjct: 518 EPDIWVEPVYVAEIIGAEITI 538
>sp|Q8PVR7|DNLI1_METMA DNA ligase 1 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM
3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=lig1 PE=3
SV=1
Length = 579
Score = 246 bits (627), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 264/519 (50%), Gaps = 39/519 (7%)
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA-KASRSSQ 294
YL PA E LGI D I+A+A A G T V+K+Y GDLG VA + S+ +
Sbjct: 43 YLFLGSTGPAFENTTLGIKDMLAIRAIAGAYGVTREDVRKRYARTGDLGDVAFELSKKRE 102
Query: 295 SMMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKL 354
S LTI VF I + +GK SQE+K +L AT E +Y++RL+ +L
Sbjct: 103 S------SLTIEDVFQRLLQIRETSGKGSQEEKTALFSDILQKATPEEGKYIVRLVLGRL 156
Query: 355 RIGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLT 414
R+G +Q LL A A +++H AAKI K+ +SV ++ L
Sbjct: 157 RLGFGDQFLLEAFAIAFTGDKKH-------------AAKI-KESYSVCTDIGELAKILAE 202
Query: 415 DGVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDG 474
+G + S PG P+ ML++ + E+ + + + E KYDGER Q+H +G
Sbjct: 203 NGA-RATGFISIKPGRPVKSMLSQRVESFEELEKRVKGKK-AAEEKYDGERVQVHKTGEG 260
Query: 475 SVEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY---DREKQKI---LPFQ 528
++ +SR E T ++P+++ V K VLD EIVAY +R +I PFQ
Sbjct: 261 -IKAFSRRLEDITSQYPEIIEDVR--KTVPANEIVLDGEIVAYAELERNGNRIEEFYPFQ 317
Query: 529 TLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
L R RK + K V ++ FDILY NG+PLL+ RR L + E G +
Sbjct: 318 NLMQRRRKYEIENYRKKCPVAVFFFDILYLNGEPLLKRPYPERR-ALLEMNVVESGIIRL 376
Query: 588 ATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGD 647
+ + + ++EI+ F + ++ EG+++K+M ++ YE KRS W K K++Y E + +
Sbjct: 377 SKRIVTESVEEIEDFFNETIEKGLEGIVVKSMSSNSYYEAGKRSWFWFKWKQEYSEGMRE 436
Query: 648 SLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSK 707
+ DLV + +++GRG+R G +GA L A + + F+++ K+GTGF+EA EE + L
Sbjct: 437 TFDLVVVGSYYGRGRRKGSFGALLCAVLNKEGQRFETLTKVGTGFTEADAEEINRLLSDH 496
Query: 708 VIPKPRPYYRFADTISPDVWFEPTE-----RPETSNSPA 741
++ + + PD++ EP E +NSP
Sbjct: 497 IVSEIPKGVSIKKGMLPDIFIEPAVVIEVLGSEITNSPG 535
>sp|C3MYD2|DNLI_SULIM DNA ligase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1)
GN=lig PE=3 SV=1
Length = 601
Score = 245 bits (626), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 288/561 (51%), Gaps = 35/561 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++L ++ + VVY+ K+ P G EL
Sbjct: 3 FKVIAEYFDKLEKISSRLQLTALLADLLS---KSDKAIIDKVVYIIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPDPL 303
GIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q + L
Sbjct: 60 GIGEKFLIKAISIATNTDENSVENLYKSIGDLGEVARRLKSKQQSTGILGFLGTSSKESL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ + T+
Sbjct: 120 KVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATV 179
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L A+ A + S A++IV++ +++ I ++ G+ L T
Sbjct: 180 LDAM--AIAFGGGQS------------ASEIVERAYNLRADLGNIAKIIVEKGIEAL-KT 224
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
GIPI PMLA+ EI+ K +YKYDGERAQIH +D + I+SR
Sbjct: 225 LKPEVGIPIRPMLAERLSNPEEILKKVGGSAL-VDYKYDGERAQIHK-KDDKIFIFSRRL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T ++PDVV +S+ + + F+++ EIVA D E ++ FQ L R RK+ I
Sbjct: 283 ENITSQYPDVVEYISKYTEG--KEFIIEGEIVAVDPESGEMRSFQELMHRKRKSDIYEAI 340
Query: 544 K-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
K V ++ FD++Y + L VRR+ L +S + + + A + ++++++ F
Sbjct: 341 KEYPVNVFLFDLMYYEDVDYTTKPLEVRRK-LLESIVKPNDYVKIAHHIQVNNVEDLKSF 399
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+GK
Sbjct: 400 FYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGK 459
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R +
Sbjct: 460 RGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKM 517
Query: 723 SPDVWFEPTERPETSNSPASI 743
PD+W EP E + +I
Sbjct: 518 EPDIWVEPVYVAEIIGAEITI 538
>sp|C3MJ14|DNLI_SULIL DNA ligase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1)
GN=lig PE=3 SV=1
Length = 601
Score = 245 bits (626), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 288/561 (51%), Gaps = 35/561 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++L ++ + VVY+ K+ P G EL
Sbjct: 3 FKVIAEYFDKLEKISSRLQLTALLADLLS---KSDKAIIDKVVYIIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPDPL 303
GIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q + L
Sbjct: 60 GIGEKFLIKAISIATNTDENSVENLYKSIGDLGEVARRLKSKQQSTGILGFLGTSSKESL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ + T+
Sbjct: 120 KVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATV 179
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L A+ A + S A++IV++ +++ I ++ G+ L T
Sbjct: 180 LDAM--AIAFGGGQS------------ASEIVERAYNLRADLGNIAKIIVEKGIEAL-KT 224
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
GIPI PMLA+ EI+ K +YKYDGERAQIH +D + I+SR
Sbjct: 225 LKPEVGIPIRPMLAERLSNPEEILKKVGGSAL-VDYKYDGERAQIHK-KDDKIFIFSRRL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T ++PDVV +S+ + + F+++ EIVA D E ++ FQ L R RK+ I
Sbjct: 283 ENITSQYPDVVEYISKYTEG--KEFIIEGEIVAVDPESGEMRSFQELMHRKRKSDIYEAI 340
Query: 544 K-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
K V ++ FD++Y + L VRR+ L +S + + + A + ++++++ F
Sbjct: 341 KEYPVNVFLFDLMYYEDVDYTTKPLEVRRK-LLESIVKPNDYVKIAHHIQVNNVEDLKSF 399
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+GK
Sbjct: 400 FYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGK 459
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R +
Sbjct: 460 RGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKM 517
Query: 723 SPDVWFEPTERPETSNSPASI 743
PD+W EP E + +I
Sbjct: 518 EPDIWVEPVYVAEIIGAEITI 538
>sp|C4KIZ2|DNLI_SULIK DNA ligase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3)
GN=lig PE=3 SV=1
Length = 601
Score = 245 bits (626), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 288/561 (51%), Gaps = 35/561 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++L ++ + VVY+ K+ P G EL
Sbjct: 3 FKVIAEYFDKLEKISSRLQLTALLADLLS---KSDKAIIDKVVYIIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPDPL 303
GIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q + L
Sbjct: 60 GIGEKFLIKAISIATNTDENSVENLYKSIGDLGEVARRLKSKQQSTGILGFLGTSSKESL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ + T+
Sbjct: 120 KVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATV 179
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L A+ A + S A++IV++ +++ I ++ G+ L T
Sbjct: 180 LDAM--AIAFGGGQS------------ASEIVERAYNLRADLGNIAKIIVEKGIEAL-KT 224
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
GIPI PMLA+ EI+ K +YKYDGERAQIH +D + I+SR
Sbjct: 225 LKPEVGIPIRPMLAERLSNPEEILKKVGGSAL-VDYKYDGERAQIHK-KDDKIFIFSRRL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T ++PDVV +S+ + + F+++ EIVA D E ++ FQ L R RK+ I
Sbjct: 283 ENITSQYPDVVEYISKYTEG--KEFIIEGEIVAVDPESGEMRSFQELMHRKRKSDIYEAI 340
Query: 544 K-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
K V ++ FD++Y + L VRR+ L +S + + + A + ++++++ F
Sbjct: 341 KEYPVNVFLFDLMYYEDVDYTTKPLEVRRK-LLESIVKPNDYVKIAHHIQVNNVEDLKSF 399
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+GK
Sbjct: 400 FYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGK 459
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R +
Sbjct: 460 RGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKM 517
Query: 723 SPDVWFEPTERPETSNSPASI 743
PD+W EP E + +I
Sbjct: 518 EPDIWVEPVYVAEIIGAEITI 538
>sp|C3MZR1|DNLI_SULIA DNA ligase OS=Sulfolobus islandicus (strain M.16.27) GN=lig PE=3
SV=1
Length = 601
Score = 245 bits (626), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 288/561 (51%), Gaps = 35/561 (6%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++L ++ + VVY+ K+ P G EL
Sbjct: 3 FKVIAEYFDKLEKISSRLQLTALLADLLS---KSDKAIIDKVVYIIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMM--------RKPDPL 303
GIG+ +IKA++ A E+ V+ Y+ +GDLG VA+ +S Q + L
Sbjct: 60 GIGEKFLIKAISIATNTDENSVENLYKSIGDLGEVARRLKSKQQSTGILGFLGTSSKESL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
+ +V+ T +A G+ S++ K + LL A E ++L+R ++ +LR+G+ + T+
Sbjct: 120 KVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATV 179
Query: 364 LAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNT 423
L A+ A + S A++IV++ +++ I ++ G+ L T
Sbjct: 180 LDAM--AIAFGGGQS------------ASEIVERAYNLRADLGNIAKIIVEKGIEAL-KT 224
Query: 424 CSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNA 483
GIPI PMLA+ EI+ K +YKYDGERAQIH +D + I+SR
Sbjct: 225 LKPEVGIPIRPMLAERLSNPEEILKKVGGSAL-VDYKYDGERAQIHK-KDDKIFIFSRRL 282
Query: 484 ERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI 543
E T ++PDVV +S+ + + F+++ EIVA D E ++ FQ L R RK+ I
Sbjct: 283 ENITSQYPDVVEYISKYTEG--KEFIIEGEIVAVDPESGEMRSFQELMHRKRKSDIYEAI 340
Query: 544 K-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKF 602
K V ++ FD++Y + L VRR+ L +S + + + A + ++++++ F
Sbjct: 341 KEYPVNVFLFDLMYYEDVDYTTKPLEVRRK-LLESIVKPNDYVKIAHHIQVNNVEDLKSF 399
Query: 603 LDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGK 662
A+ EG+++K + +DA Y+ R W+KLK+DY + D++DLV + F+G+GK
Sbjct: 400 FYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGK 459
Query: 663 RTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTI 722
R G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R +
Sbjct: 460 RGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKM 517
Query: 723 SPDVWFEPTERPETSNSPASI 743
PD+W EP E + +I
Sbjct: 518 EPDIWVEPVYVAEIIGAEITI 538
>sp|Q976G4|DNLI_SULTO DNA ligase OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 /
NBRC 100140 / 7) GN=lig PE=3 SV=1
Length = 600
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 289/574 (50%), Gaps = 47/574 (8%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL-EL 251
F ++ FD + + R+ +T ++ ++ + + + VVYL K+ P G EL
Sbjct: 3 FKLIAEYFDKLEKISSRLQLTALLTDLFKKADKNVID---KVVYLIQGKLWPDFLGYPEL 59
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVA---KASRSSQSMM-----RKPDPL 303
G+G+ +IKA++ A E V++Q + +GDLG VA K + S S++ + + L
Sbjct: 60 GVGEKLLIKAISIAVNVKEEVVEEQLKVVGDLGEVAMRLKKTPQSASILSFLGAQSNEGL 119
Query: 304 TITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTL 363
T+ + +++ IA +G+ S++ K + LL A+ E +Y++R + +LR+G+ + T+
Sbjct: 120 TVEETYESLTKIALASGEGSRDIKIRSLAGLLKKASPLEAKYIVRFVDGRLRVGIGDATI 179
Query: 364 LAALGQAAVYNEQHSKPPP-----NIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVW 418
+ AL A + S P N+++ L AKI+ Q GV
Sbjct: 180 MDALSTA--FTGSTSFRPLIERAYNLRADLGNIAKIIAQ-----------------QGVE 220
Query: 419 NLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEI 478
L + GIPI PMLA+ +EI+ K E +YKYDGERAQIH +D V I
Sbjct: 221 ALKDIKP-QVGIPIRPMLAERMSDPAEILAKVGG-EALVDYKYDGERAQIHK-KDKEVYI 277
Query: 479 YSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNV 538
+SR E T +PDVV V + +++ EIVA D E +I PFQ L R RKN
Sbjct: 278 FSRRLENITRMYPDVVEYVREY--INANEVIIEGEIVAVDPESNEIRPFQELMHRKRKND 335
Query: 539 SLSDIK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLD 597
IK V +Y FD++ + L RR+ L + + A + + ++D
Sbjct: 336 INEAIKEYPVNVYLFDLMLYEDADYTMKPLPERRKKLEEVIKPNDKL-HIAHHIYTNNVD 394
Query: 598 EIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAF 657
++ +F A+ EG+++K++ +D+ Y+ R W+KLK+DY + DS+DLV + AF
Sbjct: 395 KLMEFFYDAISNGAEGVMVKSVAKDSIYQAGSRGFLWIKLKRDYQSEMADSVDLVVVGAF 454
Query: 658 HGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYR 717
+GRGKR G + L+A YD + F+++CK+ +GFS+A L+E L + K P R
Sbjct: 455 YGRGKRGGKLSSLLMAAYDPETDTFKTVCKVASGFSDAELDELQKKLMEIKLDKKDP--R 512
Query: 718 FADTISPDVWFEPTERPETSNSPASIVYDSQITC 751
+ PD+W EP E A I + TC
Sbjct: 513 VDSQLEPDIWVEPKYVAEIIG--AEITLSPEHTC 544
>sp|Q46C04|DNLI1_METBF DNA ligase 1 OS=Methanosarcina barkeri (strain Fusaro / DSM 804)
GN=lig1 PE=3 SV=1
Length = 549
Score = 236 bits (601), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 264/527 (50%), Gaps = 42/527 (7%)
Query: 236 YLAANKIAPAHEGLELGIGDASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQS 295
YL I PA E + LGIGD +KA+A A +E VKK+Y GDLG VA +
Sbjct: 11 YLFLGSIGPAFENITLGIGDKLALKAIAGAYRVSEEEVKKRYSRTGDLGDVAFELNQGEE 70
Query: 296 MMRKPDPLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
L I +VF + + I + +GK SQE+K + ++L A+ E +Y++R++ KLR
Sbjct: 71 -----KSLAIDEVFGSLKEIKEASGKGSQEEKTGLLSSILQRASPKEGKYIVRIVLGKLR 125
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTD 415
+G +Q LL A A ++++ +K+ +SV ++ +L
Sbjct: 126 LGFGDQFLLEAFSIAFTGDKKYVVK--------------IKESYSVCTDIGELAESLAEQ 171
Query: 416 GVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS 475
G L + S G P+ MLA+ K E+ + + E KYDGER QIH ++G
Sbjct: 172 GPKALGH-FSIKLGRPVRSMLAQRVKTFEELEERIPGKK-AAEEKYDGERVQIH--KNGE 227
Query: 476 -VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRSFVLDCEIVAY------DREKQKILPFQ 528
++ +SR E T ++PDV+ AV K + VLD EI+AY + + FQ
Sbjct: 228 EIKAFSRRLEDITAQYPDVIEAVR--KGILAKKIVLDGEIIAYVEGGKANDSTGEFYSFQ 285
Query: 529 TLSTRARKNVSLSDIKV-DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQF 587
L R RK ++ V ++ FDILY G LL++ RR L + +E
Sbjct: 286 RLMKRRRKYEVQKYTEICPVAVFFFDILYLEGNSLLKKPYPERRAILEEHVKESE-ILHL 344
Query: 588 ATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGD 647
A + + +L+EI+ F + A++ EG+IIK+M R++ YE KRS WLK K++Y + +
Sbjct: 345 ARRIVTDNLEEIEDFFNEALEKRLEGIIIKSMGRNSAYEAGKRSWFWLKWKEEYASGMRE 404
Query: 648 SLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSK 707
+ DL I ++GRGKR G +GA L A + + F++ K+GTGF+EA +E S L
Sbjct: 405 TFDLAIIGKYYGRGKRKGSFGALLCAILNGEEQRFETFTKVGTGFTEADAKEIDSLLSEH 464
Query: 708 VIPKPRPYYRFADTISPDVWFEPTERPETSNSPASIVYDSQITCLPS 754
+I + + PD++ EP+ E V S+IT PS
Sbjct: 465 IISEVPKNVLIKSRMLPDIFVEPSLVIE--------VLGSEITESPS 503
>sp|A2BJX6|DNLI_HYPBU DNA ligase OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
GN=lig PE=3 SV=1
Length = 608
Score = 233 bits (593), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 183/561 (32%), Positives = 293/561 (52%), Gaps = 49/561 (8%)
Query: 191 VPFIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGL- 249
+PF L+ F+ + T R T ++ ++ +T PE + VVY K+ P +GL
Sbjct: 3 MPFSVLAETFEKLERVTAR---TQMLLYLVELFKKTPPEIIDKVVYFIQGKLWPDWKGLP 59
Query: 250 ELGIGDASIIKALAEACGRTESHVKKQYQEMGDLG----LVAKASRSSQ------SMMRK 299
ELGIG+ +IKA + A +E +++ +++GD G ++ + + Q + M+K
Sbjct: 60 ELGIGEKMLIKAASIALHVSEKQIEQLVKKLGDTGKAIEMIKREKQQKQKAVGLLAFMQK 119
Query: 300 PD----PLTITKVFDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLR 355
P LT+ KV+DT IA G+ S++ K + LL A+ E +Y+ R ++ +LR
Sbjct: 120 PSGGESTLTVEKVYDTLARIALVQGEGSRDIKLKLLAGLLAEASPREAKYIARFVEGRLR 179
Query: 356 IGLAEQTLLAALGQAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTD 415
+G+ + T++ AL A VY + ++S +E A + + V + L T
Sbjct: 180 LGVGDATIMEAL--AVVYGGSAA-----MRSVVERAYNLRADLGMVAKI-------LATQ 225
Query: 416 GVWNLSNTCSFTPGIPIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGS 475
G+ L N G+PI PMLA+ EI+ K EYKYDGERAQIH D
Sbjct: 226 GIDALKNIKPEV-GVPIRPMLAERLNDPVEIIKKLGGRAL-VEYKYDGERAQIHKKGD-K 282
Query: 476 VEIYSRNAERNTGKFPDVVLAVSRLKKPSVRS--FVLDCEIVAYDREKQKILPFQTLSTR 533
+ I+SR E T +PDVV + K +++ +++ EIVA D E + PFQ L R
Sbjct: 283 IWIFSRRLENITHMYPDVV----EMAKKGIKAEEAIVEGEIVAIDPETGEFRPFQVLMHR 338
Query: 534 ARK---NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATT 590
RK + LS+I V ++ FD LY NG+ L + L R E L + E+ ++ A
Sbjct: 339 RRKKDVHAVLSEIPV--AVFLFDTLYVNGEDLTLKPLPARHEVL-EKIIEQSDTWRIAEG 395
Query: 591 LTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLD 650
+ + D E++ F A++ EG++ K + + Y+ R W+K K+DY + D++D
Sbjct: 396 IVTSDPQELESFFLKAIEDGAEGVMAKAIHDRSIYQAGARGWLWIKYKRDYKSEMSDTVD 455
Query: 651 LVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIP 710
LV I AF+G+G+R G +GA L+A YD + + F+S+CK+G+GF++ LE L+ +
Sbjct: 456 LVVIGAFYGKGRRGGKFGALLMAAYDPDTDTFKSVCKVGSGFTDEDLERLDDMLKPYISD 515
Query: 711 KPRPYYRFADTISPDVWFEPT 731
K +P R + PDVW EPT
Sbjct: 516 K-KP-ARVDSQMKPDVWVEPT 534
>sp|O67398|DNLI_AQUAE Probable DNA ligase OS=Aquifex aeolicus (strain VF5) GN=lig PE=3
SV=2
Length = 584
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 272/540 (50%), Gaps = 36/540 (6%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ ++ I T RI ++V +++ +T E + VVYL+ KIAP + GL+ G+
Sbjct: 6 LAEFYERIEKTTSRI---EMVSSLVELFKQTPKELIDKVVYLSIGKIAPEYTGLDYNFGE 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLGLVAKASRSSQSMMRKPD-PLTITKVFDTFRL 314
I+AL+ ++K+ ++ GDLG + + + + KP+ LT+ +V++
Sbjct: 63 KLAIRALSRVLKIPALEIEKRVRQEGDLGEAGR--KLYEELGFKPEGTLTVEEVYNGLLN 120
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQA---A 371
IAK G SQE+K + +LL AT E +YL+R + +LR+G+ + T+L AL A +
Sbjct: 121 IAKAVGIGSQERKISIFASLLKKATPLEAKYLLRTITERLRLGIGDNTILEALSIAFTGS 180
Query: 372 VYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGIP 431
N + + N+ S L AKI+ + G+ + G P
Sbjct: 181 SVNREVVERAYNLTSDLGYVAKILAE-----------------KGLEGVKQ-VKIQVGRP 222
Query: 432 IGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKFP 491
+ PMLA+ I+ K + EYKYDGER Q H D ++SR E T ++P
Sbjct: 223 VRPMLAERMSSPILILRKLGG-KCGAEYKYDGERIQAHRKGD-EFYLFSRRLENITHQYP 280
Query: 492 DVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI-KVDVCIY 550
D++ LK+ F+++ E V D +I PFQ L R K V+ I K V +
Sbjct: 281 DLI---EFLKEAIPHDFIVELEAVVIDPASGEIRPFQELMHRKVKYVTKYHITKYPVAGF 337
Query: 551 AFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDAS 610
FDI+Y +G+ L + RRE L + + ++++++ F A++
Sbjct: 338 LFDIIYLDGEDLTLKPYPERREILEKVVKRTDRIGLVPRKIVD-NVEDLENFFYQAIEEG 396
Query: 611 CEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAF 670
CEGL+ K++ ++ Y+ KR W+K K+DY + D+LDLV + F+G+G+R G +G+
Sbjct: 397 CEGLVCKSLAPNSIYQAGKRGFLWIKYKRDYKSVLADTLDLVVVGGFYGKGQRKGTFGSL 456
Query: 671 LLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEP 730
L+ACYD ++ F+++ K+GTGF+E ++ L + + P R + D+WFEP
Sbjct: 457 LMACYDPESDMFKTVTKVGTGFTEDDFKKLEEILMPRKLNHRHP--RVNSILEADMWFEP 514
>sp|B8DZX8|DNLI_DICTD Probable DNA ligase OS=Dictyoglomus turgidum (strain Z-1310 / DSM
6724) GN=lig PE=3 SV=1
Length = 582
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 275/544 (50%), Gaps = 49/544 (9%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ F+ I T R + +I+ ++ + V E++ ++YL ++AP +E +E G+ +
Sbjct: 6 LAQYFEKIEKTTKRNEMMEILADLFKRV---DKEEIEKIIYLLNGRVAPDYEKIEFGMSE 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLG-LVAKASRSSQSMMRKPDPLTITKVFDTFRL 314
+++A+A A ++K Y+E+GDLG L+ K S++ LT+ + F+T
Sbjct: 63 KLVLRAMALALKVPIFDLEKVYKEVGDLGELIIKYSQNEGK------DLTVVETFNTLFE 116
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
IA +G+ S + K NR+ L+ + T +YL+R++ KLR+G+ E T++ AL A V
Sbjct: 117 IANLSGEGSVDAKVNRLAFLINSLTPQGGKYLVRIVLGKLRLGVGEPTVMDALSFAKV-K 175
Query: 375 EQHSKP----PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
++ +P NI S L AK+ +E + AL G
Sbjct: 176 DKSLRPFIERAFNITSDLGYVAKV---------FWEGGIEAL---------KKIKVEVGK 217
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
PI LA+ V EIV + E K+DG R QIH E+ +V I+SRN E NT F
Sbjct: 218 PIRMALAERVSKVEEIVKRLGKC--AIEPKFDGFRCQIHKKEN-NVRIFSRNLEDNTHMF 274
Query: 491 PDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCI 549
PD+V AV LK+ S ++ +++ E ++Y+ E + PFQ R RK N+S + +
Sbjct: 275 PDLVEAV--LKQFSDKNVIIEGEAISYNPETGEFYPFQVTVQRKRKYNISEMVELYPLQL 332
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+AFDILY NG+ + RR+ L ++ E F +T+ D EIQ F + +
Sbjct: 333 FAFDILYLNGEDITSLPYIRRRQKLEEAISEGEKIFVTKNIITN-DPKEIQAFFEECITE 391
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT--GVY 667
EG++ K + DA Y+ R+ NW+KLK+ Y + D++D V + F GRG R G+
Sbjct: 392 GLEGIVAKRL--DAPYQAGIRNFNWIKLKRSYQGHLADTVDCVILGYFKGRGHRAKFGI- 448
Query: 668 GAFLLACYDSNNEEFQSICKIGTG-FSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
GA L+ YD + F+++ KIGTG E + R K+ KP I PDV
Sbjct: 449 GALLVGVYDDERDLFKTVAKIGTGPTEEEWVRFREVLDEIKLESKPN---NVESLIEPDV 505
Query: 727 WFEP 730
W EP
Sbjct: 506 WVEP 509
>sp|B5YD88|DNLI_DICT6 Probable DNA ligase OS=Dictyoglomus thermophilum (strain ATCC 35947
/ DSM 3960 / H-6-12) GN=lig PE=3 SV=1
Length = 582
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 271/544 (49%), Gaps = 49/544 (9%)
Query: 196 LSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVVYLAANKIAPAHEGLELGIGD 255
L+ F+ I T R + +I+ ++ R V E++ ++YL ++AP +E +E G+ D
Sbjct: 6 LAQYFERIEKTTKRNEMMEILADLFRKV---DKEEIDKIIYLLNGRVAPDYEKIEFGMSD 62
Query: 256 ASIIKALAEACGRTESHVKKQYQEMGDLG-LVAKASRSSQSMMRKPDPLTITKVFDTFRL 314
+++A+A A +++ Y+E+GDLG LV K S++ LT+ + F+T
Sbjct: 63 KLVLRAMALALKIPLLELERSYKEVGDLGELVVKYSKNEGK------DLTVVETFNTLYD 116
Query: 315 IAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQAAVYN 374
IA +G+ S + K NR+ L+ + T +YL+R++ KLR+G+ E T++ AL A V
Sbjct: 117 IANLSGEGSVDAKVNRLAFLINSLTPQGGKYLVRIVLGKLRLGVGEPTIMDALSFAKV-K 175
Query: 375 EQHSKP----PPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTPGI 430
++ +P NI S L AK+ +E V AL G
Sbjct: 176 DKGLRPFIERAFNITSDLGYVAKV---------FWEGGVEAL---------KRIKVQVGR 217
Query: 431 PIGPMLAKPTKGVSEIVNKFQDMEFTCEYKYDGERAQIHYLEDGSVEIYSRNAERNTGKF 490
PI LA+ EI+ + E K+DG R QIH E+ SV I+SRN E NT F
Sbjct: 218 PIRMALAERVSRAEEIIKRLGKC--AVEPKFDGFRCQIHKKEN-SVRIFSRNLEDNTYMF 274
Query: 491 PDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCI 549
PD+V AV LK+ R +++ E ++Y+ E + PFQ R RK N+S + +
Sbjct: 275 PDLVEAV--LKQFPDRDVIIEGEAISYNPETGEFYPFQVTVQRKRKYNISEMVELYPLQL 332
Query: 550 YAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLDAAVDA 609
+AFDILY +G+ RR+ L ++ E + + D EIQ F + +
Sbjct: 333 FAFDILYLDGEDTTSLPYIRRRQKLEEALVEGEK-ISITKNIITNDPKEIQSFFEECITE 391
Query: 610 SCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT--GVY 667
EG++ K + DA Y+ R+ NW+KLK+ Y + D++D V + F GRG R G+
Sbjct: 392 GLEGIVAKRL--DAPYQAGMRNFNWIKLKRSYQGHLADTVDCVILGYFKGRGHRAKFGI- 448
Query: 668 GAFLLACYDSNNEEFQSICKIGTG-FSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDV 726
GA L+ YD + F++I KIGTG E ++ R KV +P F I PDV
Sbjct: 449 GALLVGVYDDERDLFKTIAKIGTGPTEEEWVKFREILDEIKVEKRPNNVESF---IEPDV 505
Query: 727 WFEP 730
W EP
Sbjct: 506 WVEP 509
>sp|P0CL74|DNLI_PYRAY DNA ligase OS=Pyrococcus abyssi GN=lig PE=3 SV=1
Length = 559
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 269/546 (49%), Gaps = 57/546 (10%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLEL 251
+I L+ ++ + T +++ T +V + L+ V PED + + YL + P + EL
Sbjct: 3 YIELAQLYQKLEKTTMKLIKTRLVADFLKKV----PEDHLEFIPYLILGDVFPEWDEREL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLG---LVAKASRSSQSMMRKPDPLTITKV 308
G+G+ +IKA++ A G ++ ++ GDLG +A R +S +P LTI +V
Sbjct: 59 GVGEKLLIKAVSMATGIDSKEIENSVKDTGDLGESIALAVKRRKQKSFFSQP--LTIKRV 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
+ T +A+ G+ SQ+KK + L + A E +Y+ R + +R G+AE L A+
Sbjct: 117 YQTLVKVAETTGEGSQDKKMKYLANLFMDAEPIEAKYIARTVLGTMRTGVAEGLLRDAIS 176
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
A N++ L E A ++ F + KI DG+ +
Sbjct: 177 LAF-----------NVKVELVERAYMLTSDFGFVA---KIAKTEGNDGL----AKVTIQI 218
Query: 429 GIPIGPMLAKPTKGVSE-IVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERN 486
G PI PMLA+ + E ++ + EF E KYDG R Q+H +DG V IYSR E
Sbjct: 219 GKPIKPMLAQQAANIKEALLEMGGEAEF--EIKYDGARVQVH--KDGEKVTIYSRRLENV 274
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--K 544
T P++V A+ KP+ +++ E+VA E + LPFQ + R R+ ++ ++ K
Sbjct: 275 TRAIPEIVEAIKEALKPA--KAIVEGELVAIG-EDGRPLPFQYVLRRFRRKYNIEEMMEK 331
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + + FD+LY +G L+ + RR+ L + E G + A L + +++E ++F
Sbjct: 332 IPLELNLFDVLYVDGVSLIDTKFMERRKKL-EEIVEANGKVKIAENLITKNVEEAEQFYK 390
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A++ EGL+ K +D A YEP R WLK+K ++LDLV I A G G+R
Sbjct: 391 RALEMGHEGLMAKRLD--AIYEPGNRGKKWLKIKPTM-----ENLDLVIIGAEWGEGRRA 443
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
+ G+F+L YD EF + K+G+GF++ L E + LR +I +
Sbjct: 444 HLLGSFILGAYDPETGEFLEVGKVGSGFTDDDLVEFTKMLRPLIIKEE----------GK 493
Query: 725 DVWFEP 730
VW +P
Sbjct: 494 RVWIQP 499
>sp|P0CL75|DNLI_PYRAB DNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=lig PE=3
SV=1
Length = 559
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 162/546 (29%), Positives = 269/546 (49%), Gaps = 57/546 (10%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLEL 251
+I L+ ++ + T +++ T +V + L+ V PED + + YL + P + EL
Sbjct: 3 YIELAQLYQKLEKTTMKLIKTRLVADFLKKV----PEDHLEFIPYLILGDVFPEWDEREL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLG---LVAKASRSSQSMMRKPDPLTITKV 308
G+G+ +IKA++ A G ++ ++ GDLG +A R +S +P LTI +V
Sbjct: 59 GVGEKLLIKAVSMATGIDSKEIENSVKDTGDLGESIALAVKKRKQKSFFSQP--LTIKRV 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
+ T +A+ G+ SQ+KK + L + A E +Y+ R + +R G+AE L A+
Sbjct: 117 YQTLVKVAETTGEGSQDKKMKYLANLFMDAEPIEAKYIARTVLGTMRTGVAEGLLRDAIS 176
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
A N++ L E A ++ F + KI DG+ +
Sbjct: 177 LAF-----------NVKVELVERAYMLTSDFGFVA---KIAKTEGNDGL----AKVTIQI 218
Query: 429 GIPIGPMLAKPTKGVSE-IVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERN 486
G PI PMLA+ + E ++ + EF E KYDG R Q+H +DG V IYSR E
Sbjct: 219 GKPIKPMLAQQAANIKEALLEMGGEAEF--EIKYDGARVQVH--KDGEKVTIYSRRLENV 274
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--K 544
T P++V A+ KP+ +++ E+VA E + LPFQ + R R+ ++ ++ K
Sbjct: 275 TRAIPEIVEAIKEALKPT--KAIVEGELVAIG-EDGRPLPFQYVLRRFRRKYNIEEMMEK 331
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + + FD+LY +G L+ + RR+ L + E G + A L + +++E ++F
Sbjct: 332 IPLELNLFDVLYVDGVSLIDTKFMERRKKL-EEIVETNGKVKIAENLITKNVEEAEQFYK 390
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A++ EGL+ K +D A YEP R WLK+K ++LDLV I A G G+R
Sbjct: 391 RALEMGHEGLMAKRLD--AVYEPGNRGKKWLKIKPTM-----ENLDLVIIGAEWGEGRRA 443
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISP 724
+ G+F+L YD EF + K+G+GF++ L E + L+ +I +
Sbjct: 444 HLLGSFILGAYDPETGEFLEVGKVGSGFTDDDLVEFTKMLKPLIIKEE----------GK 493
Query: 725 DVWFEP 730
VW +P
Sbjct: 494 RVWIQP 499
>sp|O59288|DNLI_PYRHO Probable thermostable DNA ligase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=lig PE=3 SV=1
Length = 559
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 265/525 (50%), Gaps = 47/525 (8%)
Query: 193 FIFLSLVFDMISNETGRILITDIVCNMLRTVMETTPEDLVPVV-YLAANKIAPAHEGLEL 251
+I L+ ++ + T +++ T +V + L+ V PED + + YL + P + EL
Sbjct: 3 YIELAQLYQKLEKTTMKLIKTRLVADFLKRV----PEDHLDFIPYLILGDVFPEWDEREL 58
Query: 252 GIGDASIIKALAEACGRTESHVKKQYQEMGDLG---LVAKASRSSQSMMRKPDPLTITKV 308
G+G+ +IKA++ A G ++ ++ GDLG +A R +S +P LTI +V
Sbjct: 59 GVGEKLLIKAVSMATGVDPKEIENSVKDTGDLGESIALAIKRRKQKSFFSQP--LTIKRV 116
Query: 309 FDTFRLIAKEAGKDSQEKKKNRIKALLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALG 368
+ T IA+ G+ SQEKK + L + A E +YL R + +R G+AE L A+
Sbjct: 117 YQTLVKIAETTGEGSQEKKMKYLANLFMDAEPLEAKYLARTVLGTMRTGVAEGLLRDAIA 176
Query: 369 QAAVYNEQHSKPPPNIQSPLEEAAKIVKQVFSVLPVYEKIVPALLTDGVWNLSNTCSFTP 428
A +++ L E A ++ F + KI A +G+ +
Sbjct: 177 LAF-----------HVKVELVERAYMLTSDFGFVA---KIAKAEGNEGL----EKVTIQL 218
Query: 429 GIPIGPMLAKPTKGVSE-IVNKFQDMEFTCEYKYDGERAQIHYLEDGS-VEIYSRNAERN 486
G PI PMLA+ + E ++ + EF E KYDG R Q+H +DG V IYSR E
Sbjct: 219 GKPIKPMLAQQAANIKEALLEMGGEAEF--EIKYDGARVQVH--KDGEKVIIYSRRLENV 274
Query: 487 TGKFPDVVLAVSRLKKPSVRSFVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI--K 544
T P++V A+ +P +++ E+VA E+ + LPFQ + R R+ ++ ++ K
Sbjct: 275 TRAIPEIVEAIKEAIEPE--KVIVEGELVAIG-EEGRPLPFQYVLRRFRRKHNIEEMMKK 331
Query: 545 VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGFFQFATTLTSIDLDEIQKFLD 604
+ + + FD+LY +G+ + + RR+ L + + G + A L + + +E +KF
Sbjct: 332 IPLELNLFDVLYVDGKSFVDTKFIERRKKL-EEIVKPNGKIKVAENLITKNAEEAEKFYK 390
Query: 605 AAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRT 664
A++ EGL+ K +D A YEP R WLK+K ++LDLV I A G G+R
Sbjct: 391 RALEMGHEGLMAKRLD--AVYEPGNRGKKWLKIKPTM-----ENLDLVIIGAEWGEGRRA 443
Query: 665 GVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVI 709
++G+F+L YD EF + K+G+GF++ L E + L+ ++
Sbjct: 444 HLFGSFILGAYDPETGEFLEVGKVGSGFTDDDLVEFTKMLKPLIV 488
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 281,542,770
Number of Sequences: 539616
Number of extensions: 12153635
Number of successful extensions: 49432
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 295
Number of HSP's that attempted gapping in prelim test: 47019
Number of HSP's gapped (non-prelim): 1434
length of query: 768
length of database: 191,569,459
effective HSP length: 125
effective length of query: 643
effective length of database: 124,117,459
effective search space: 79807526137
effective search space used: 79807526137
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)