Your job contains 1 sequence.
>004214
MFALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD
LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA
VCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDV
TISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNE
EILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILI
VTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL
SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG
HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV
SCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTAAE
REEAFRKEEEAVLRGQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCRKREAELQI
EKALHALGKEEIRQLLEYVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEG
LIPYTQRHFSRIDRLVRSTFLLDYTLTGMSVIEPDTEAREVKAESLVDSNVHQDANDVVI
TENVAKEQIESEGKTASKKRKSHKSRESSHKKERRADQTNAAAISLQA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004214
(768 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 2618 2.8e-272 1
UNIPROTKB|F1NM37 - symbol:TBL3 "Uncharacterized protein" ... 1380 4.3e-141 1
RGD|1305142 - symbol:Tbl3 "transducin (beta)-like 3" spec... 1046 1.5e-140 2
MGI|MGI:2384863 - symbol:Tbl3 "transducin (beta)-like 3" ... 1052 1.0e-139 2
UNIPROTKB|F1Q065 - symbol:TBL3 "Uncharacterized protein" ... 1039 2.1e-139 2
UNIPROTKB|F1MNS4 - symbol:TBL3 "Transducin beta-like prot... 1046 2.7e-139 2
UNIPROTKB|Q2KJJ5 - symbol:TBL3 "Transducin beta-like prot... 1046 2.7e-139 2
UNIPROTKB|Q12788 - symbol:TBL3 "Transducin beta-like prot... 1028 1.3e-137 2
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 1198 3.2e-134 2
DICTYBASE|DDB_G0276283 - symbol:utp13 "U3 snoRNP protein"... 1181 5.2e-120 1
UNIPROTKB|J3KNP2 - symbol:TBL3 "Transducin beta-like prot... 964 5.2e-97 1
CGD|CAL0000293 - symbol:UTP13 species:5476 "Candida albic... 748 1.8e-95 2
UNIPROTKB|Q5AGB1 - symbol:CaO19.11744 "Putative uncharact... 748 1.8e-95 2
SGD|S000004212 - symbol:UTP13 "Nucleolar protein" species... 915 8.1e-92 1
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 834 3.1e-83 1
FB|FBgn0033454 - symbol:CG1671 species:7227 "Drosophila m... 761 1.7e-75 1
WB|WBGene00013143 - symbol:Y53C12B.1 species:6239 "Caenor... 589 7.7e-68 2
UNIPROTKB|I3LPF4 - symbol:TBL3 "Uncharacterized protein" ... 489 7.2e-61 3
ASPGD|ASPL0000073843 - symbol:AN4460 species:162425 "Emer... 305 2.7e-58 4
UNIPROTKB|J9PAK6 - symbol:TBL3 "Uncharacterized protein" ... 544 1.7e-52 1
UNIPROTKB|F1NC11 - symbol:WDR3 "Uncharacterized protein" ... 301 2.2e-34 2
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 316 6.6e-34 4
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 334 5.5e-33 2
SGD|S000004119 - symbol:DIP2 "Nucleolar protein" species:... 305 6.2e-33 2
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 302 9.6e-33 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 323 6.8e-32 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 327 1.1e-31 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 383 2.3e-30 2
RGD|1307480 - symbol:Wdr3 "WD repeat domain 3" species:10... 284 2.6e-30 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 330 6.8e-29 1
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 336 1.4e-28 2
ASPGD|ASPL0000054401 - symbol:AN0305 species:162425 "Emer... 276 2.4e-28 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 300 9.0e-28 3
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 271 3.5e-27 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 244 1.4e-26 2
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 243 1.4e-26 2
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 246 3.3e-26 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 249 3.3e-26 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 248 5.6e-26 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 245 1.5e-25 2
UNIPROTKB|G4MTR1 - symbol:MGG_04746 "DOM34-interacting pr... 322 2.6e-25 1
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 241 2.7e-25 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 296 3.2e-25 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 269 7.0e-25 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 236 1.0e-24 2
FB|FBgn0038597 - symbol:CG8064 species:7227 "Drosophila m... 294 2.5e-24 2
UNIPROTKB|Q9UNX4 - symbol:WDR3 "WD repeat-containing prot... 312 3.1e-24 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 285 4.8e-24 1
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 237 6.9e-24 2
UNIPROTKB|F1SAY9 - symbol:WDR3 "Uncharacterized protein" ... 308 8.5e-24 1
POMBASE|SPBC3D6.12 - symbol:dip2 "U3 snoRNA associated pr... 307 1.0e-23 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 281 1.3e-23 1
WB|WBGene00017435 - symbol:F13H8.2 species:6239 "Caenorha... 228 1.5e-23 2
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 256 1.5e-23 2
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 256 1.5e-23 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 280 1.7e-23 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 280 1.7e-23 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 280 1.7e-23 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 280 1.7e-23 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 280 1.7e-23 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 280 1.7e-23 1
UNIPROTKB|E1BM03 - symbol:WDR3 "Uncharacterized protein" ... 304 2.3e-23 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 278 2.8e-23 1
MGI|MGI:2443143 - symbol:Wdr3 "WD repeat domain 3" specie... 303 3.0e-23 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 250 3.8e-23 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 231 4.4e-23 2
ASPGD|ASPL0000046644 - symbol:AN2021 species:162425 "Emer... 237 4.6e-23 2
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 228 1.1e-22 2
TAIR|locus:2089855 - symbol:AT3G21540 "AT3G21540" species... 307 1.1e-22 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 272 1.2e-22 1
UNIPROTKB|Q9Y263 - symbol:PLAA "Phospholipase A-2-activat... 296 1.2e-22 1
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 289 1.3e-22 1
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 293 1.4e-22 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 270 2.0e-22 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 291 2.0e-22 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 219 2.5e-22 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 220 3.2e-22 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 219 4.1e-22 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 219 4.1e-22 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 219 4.1e-22 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 267 4.2e-22 1
RGD|621245 - symbol:Plaa "phospholipase A2, activating pr... 290 5.6e-22 1
UNIPROTKB|P54319 - symbol:Plaa "Phospholipase A-2-activat... 290 5.6e-22 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 265 6.9e-22 1
MGI|MGI:104810 - symbol:Plaa "phospholipase A2, activatin... 289 7.2e-22 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 277 1.1e-21 1
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 276 1.4e-21 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 277 1.4e-21 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 216 2.0e-21 2
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 260 2.4e-21 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 274 2.6e-21 1
UNIPROTKB|Q9BZK7 - symbol:TBL1XR1 "F-box-like/WD repeat-c... 253 2.8e-21 2
UNIPROTKB|F1SGD0 - symbol:TBL1XR1 "Uncharacterized protei... 253 2.8e-21 2
RGD|1560053 - symbol:Tbl1xr1 "transducin (beta)-like 1 X-... 253 2.8e-21 2
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 255 2.9e-21 2
CGD|CAL0002491 - symbol:DIP2 species:5476 "Candida albica... 231 3.0e-21 3
UNIPROTKB|Q5A756 - symbol:DIP2 "Putative uncharacterized ... 231 3.0e-21 3
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 255 3.7e-21 2
UNIPROTKB|F1NYZ8 - symbol:TBL1XR1 "Uncharacterized protei... 252 3.7e-21 2
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 255 3.8e-21 2
WARNING: Descriptions of 1568 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 2618 (926.6 bits), Expect = 2.8e-272, P = 2.8e-272
Identities = 501/741 (67%), Positives = 609/741 (82%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK-- 64
GADRKVLVWDVDGGFCTHYF+GHKGVVSSILFHPD++K++L SGSDDATVRVWDL AK
Sbjct: 121 GADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNT 180
Query: 65 --KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC 122
KC+A ++KHFS VTS+A++ DG TL SAGRDKVVNLWDL DYSCK TV TYE++EAV
Sbjct: 181 EKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVT 240
Query: 123 AIPPGSAFDSFLSSYNQQTIKKKRR-SLEIHFITVGERGIVRMWNAD-SACLYEQKSSDV 180
+ G+ F SF++S +Q+ KKK S +FITVGERG+VR+W ++ S CLYEQKSSD+
Sbjct: 241 TVSSGTPFASFVASLDQKKSKKKESDSQATYFITVGERGVVRIWKSEGSICLYEQKSSDI 300
Query: 181 TISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNE 240
T+S + ++SKRGFTAA +LPS+ GLLCVTADQQ Y+ VE E+ EL+LSKRLVGYNE
Sbjct: 301 TVSSDDEESKRGFTAAAMLPSDHGLLCVTADQQFFFYSVVENVEET-ELVLSKRLVGYNE 359
Query: 241 EILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILI 300
EI D+KFLG+EEQ+LAVATN+E+V+VYD+++MSCSYVLAGH E+VL LDTC SSG +LI
Sbjct: 360 EIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLI 419
Query: 301 VTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 360
VTGSKD +VRLW++ S+ C+GVGTGH G + AVAF+KK +F VSGS D T+KVWS DG+
Sbjct: 420 VTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGI 479
Query: 361 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG 420
S+D+E+P+NLK ++VVAAH KDINS+AVA NDSLVCTGS+DRTA +WRLPDLV VVT +G
Sbjct: 480 SEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKG 539
Query: 421 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 480
HKR I+SVEFS VDQ V+TASGDKT+KIW+ISDGSCLKTFEGHTSSVLRASF+T G Q V
Sbjct: 540 HKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFV 599
Query: 481 SCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXX 540
SCGADGL+KLW V T ECIATYD+HEDK+WALAVGKKTEM ATGG DA++NLWHDST
Sbjct: 600 SCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASD 659
Query: 541 XXXXXXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCRKREAELQI 600
+LRGQELENAVLDA+YTKAI++AFEL RPHK+FELF+ +CRKR+++ QI
Sbjct: 660 KEDDFRKEEEAILRGQELENAVLDAEYTKAIRLAFELCRPHKVFELFSGLCRKRDSDEQI 719
Query: 601 EKALHALGKEEIRQLLEYVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEG 660
KAL L KEE R L EYVREWNTKPKLCH+AQFVL++ FNI PPTEI+++KGI ++LEG
Sbjct: 720 VKALQGLEKEEFRLLFEYVREWNTKPKLCHIAQFVLYKTFNILPPTEIVQVKGIGELLEG 779
Query: 661 LIPYTQRHFSRIDRLVRSTFLLDYTLTGMSVIEPDT-EAR----EVKAESLVDSNVHQDA 715
LIPY+QRHFSRIDR VRS+FLLDYTL MSVI+P+T E E K E V + + QD
Sbjct: 780 LIPYSQRHFSRIDRFVRSSFLLDYTLGEMSVIDPETVETEYPKDEKKKEKDVIAAMEQDT 839
Query: 716 NDVVI-TENVAKEQIESEGKT 735
+++ T + ++ +S+GK+
Sbjct: 840 DELKQETPSRKRKSQKSKGKS 860
Score = 184 (69.8 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 248 LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDN 307
L +++ L A + Q++V+DL ++ C GH V+ + C S G L+ T D
Sbjct: 68 LSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGM-ACHASGG--LLATAGADR 124
Query: 308 SVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL-QNFLVSGSSDHTIKVWSFDGLSDDAEQ 366
V +WD + C GH G V ++ F +N L+SGS D T++VW + + + E+
Sbjct: 125 KVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLN--AKNTEK 182
Query: 367 PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD 411
K A++ H + S+A++ + + + +D+ +W L D
Sbjct: 183 ----KCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHD 223
Score = 183 (69.5 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 41/171 (23%), Positives = 79/171 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K+ + + +LA++P+D L+ + R VW L L + +++GH+ + +
Sbjct: 53 KSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHA 112
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ--IVSCGADGLVKL 490
++ TA D+ + +W + G C F GH V F + ++S D V++
Sbjct: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRV 172
Query: 491 WTVRTG----ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW--HD 535
W + +C+A +KH + ++A+ + + G D +VNLW HD
Sbjct: 173 WDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHD 223
Score = 132 (51.5 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 34/117 (29%), Positives = 55/117 (47%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 86
+G ++++ PD DK LLFS +RVWDL KC+ + H V MA + G
Sbjct: 57 EGESDTLTALALSPD-DK-LLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASG 114
Query: 87 STLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 143
L +AG D+ V +WD+ C ++ V + P S + +S + T++
Sbjct: 115 GLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVR 171
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
Identities = 273/695 (39%), Positives = 415/695 (59%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D + +WD+ +CTH KG GVV + FHPD + LFS S D +R+WDL + KC
Sbjct: 129 GCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKC 188
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 126
VA LD HFS VTS+A T+DG+TLIS+GRDK+ +W+L+ T+P YE VEA +P
Sbjct: 189 VAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTIPIYESVEAAVLLPE 248
Query: 127 GSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWN-ADSACLYEQKSSDVTISFE 185
F +Q +KK+ +HF+T G +G++++W A +AC+Y Q + E
Sbjct: 249 QGDF-------SQLGVKKQG----LHFLTAGSKGVLKVWEVATAACVYSQPVPFEPVESE 297
Query: 186 MDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 245
+ S+ T ++P ++ V+ + ++ Y L L K+L GYN+E+LD+
Sbjct: 298 EEASEHSLTHCMLVPERNEIVTVSVEHNIVFYDA-------QTLQLRKQLAGYNDEVLDV 350
Query: 246 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSK 305
KFLG + ++ VATN Q++V++LS+ C +L GH+E +L LD G ++ V+ +K
Sbjct: 351 KFLGPGDSHIVVATNSPQLKVFELSTSHCQ-ILYGHTETILALDV--FRKG-LMFVSCAK 406
Query: 306 DNSVRLW--DSESRC-CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF-DGLS 361
D S+R+W + + R CV G GH VGAV+ S+ ++F+V+ S D TIKVW+ + L+
Sbjct: 407 DKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKVWNIPESLT 466
Query: 362 DDAEQ-----PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV 416
A+ P L A+ H KDINS+AV+PND L+ TGSQDR A +W PD +
Sbjct: 467 SKAKAALISGPETLHAQMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLG 526
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
F GHKRGIW V+FSPVDQ++ T+S D T+K+W + D SCLKTFEGH +SVL+ F++RG
Sbjct: 527 VFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRG 586
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 536
Q++S G+DGL+KLWT++T EC+ T D HEDKIW L K+ +M T SD+ + LW D
Sbjct: 587 TQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLWKDV 646
Query: 537 TXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCRKREA 596
T +++ QEL N + + Y KA+ +A L RPH + + ++ ++ +
Sbjct: 647 TEIEQEEAQAKREEQIMKEQELSNLLHEKRYLKALGLAISLDRPHTVLTVIKAILKESDG 706
Query: 597 ELQIEKALHALGKEEIRQLLEYVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISD 656
++E+ + L K++ +L ++ WNT + CH AQ V+ L P +++ GI
Sbjct: 707 RKRLEENIARLRKDQKEAVLTFLVTWNTNSRNCHEAQAVIETLLKHEAPDNLLQYSGIKS 766
Query: 657 VLEGLIPYTQRHFSRIDRLVRSTFLLDYTLTGMSV 691
+E L+PYT+RHF R+ RL++++ +D+ M +
Sbjct: 767 AVESLLPYTERHFQRLSRLLQASMFIDFMWQNMKL 801
Score = 156 (60.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 39/161 (24%), Positives = 73/161 (45%)
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG-HKRGIWSVEFSPVDQVVIT 439
+DI S ++P+D ++ TGS+ W + V T++ H + ++ F ++ T
Sbjct: 68 EDITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLAT 127
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF---LTRGAQIVSCGADGLVKLWTVRTG 496
D TIKIW + C +G + V F ++R Q+ S D +++W + +
Sbjct: 128 GGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISR-LQLFSSSMDYKIRIWDLNSS 186
Query: 497 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+C+A D H + +LA + G D + +W+ T
Sbjct: 187 KCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKT 227
Score = 150 (57.9 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 53/221 (23%), Positives = 96/221 (43%)
Query: 293 LSSGKILIVTGSKDNSVRLWD-SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHT 351
LS ++VTGS+ ++ W+ E+RC H+ V + F L +G D T
Sbjct: 75 LSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDST-STLLATGGCDST 133
Query: 352 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV--CTGSQDRTACVWRL 409
IK+W D + NLK + V ++ + P+ S + + S D +W L
Sbjct: 134 IKIW--DMIKQYCTH--NLKGSSGV------VHLVEFHPDISRLQLFSSSMDYKIRIWDL 183
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT---FEGHTSS 466
V GH + S+ F+ +I++ DK +W++ ++T +E ++
Sbjct: 184 NSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTIPIYESVEAA 243
Query: 467 VL---RASFLT-----RGAQIVSCGADGLVKLWTVRTGECI 499
VL + F +G ++ G+ G++K+W V T C+
Sbjct: 244 VLLPEQGDFSQLGVKKQGLHFLTAGSKGVLKVWEVATAACV 284
Score = 131 (51.2 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 43/181 (23%), Positives = 76/181 (41%)
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNF-LVSGSS 348
T S L+ TG D+++++WD + C G G V V F + L S S
Sbjct: 115 TMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSM 174
Query: 349 DHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLA-VAPNDSLVCTGSQDRTACVW 407
D+ I++W + + K AV+ H + SLA A ++L+ +G +D+ VW
Sbjct: 175 DYKIRIWDLN----------SSKCVAVLDGHFSAVTSLAFTADGNTLISSG-RDKICMVW 223
Query: 408 RLPDLVSVVT---FRGHKRGIWSVEFSPVDQV--------VITASGDKTIKIWSISDGSC 456
L S+ T + + + E Q+ +TA +K+W ++ +C
Sbjct: 224 NLKTRESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGLHFLTAGSKGVLKVWEVATAAC 283
Query: 457 L 457
+
Sbjct: 284 V 284
Score = 52 (23.4 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 77 VTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLT 111
+TS ++ D L++ R ++ W+ R+ C T
Sbjct: 70 ITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRT 104
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 1046 (373.3 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
Identities = 217/551 (39%), Positives = 330/551 (59%)
Query: 151 IHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVT 209
+HF+T G++GI+R+W A S C+Y Q +M ++ T T+ + LL VT
Sbjct: 260 LHFLTAGDQGILRVWEAASGQCVYTQP--------QMSGLRQELTHCTLARAAGLLLTVT 311
Query: 210 ADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDL 269
AD LLLY + L L K+ GY+EE+LD++FLG + ++ VA+N ++V++L
Sbjct: 312 ADHNLLLY-------EARSLQLQKQFAGYSEEVLDVRFLGPNDSHIIVASNSPCLKVFEL 364
Query: 270 SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR---CCVGVGTGH 326
+++C +L GH++IVL LD G L + +KD S+R+W CV G+GH
Sbjct: 365 QTLACQ-ILHGHTDIVLALDV--FRKGW-LFASCAKDQSIRIWRMNKAGQVACVAQGSGH 420
Query: 327 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF-DGL-----SDDAEQPMNLKAKAVVAAHG 380
+VG + S+ ++FLV+GS D T+K+W + L + D + + L+A++ H
Sbjct: 421 THSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDL-IPLQAQSTQRCHD 479
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 440
KDINSLAV+PND L+ TGSQDRTA +W LP + F GH+RG+W+V+FSP DQV+ TA
Sbjct: 480 KDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATA 539
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 500
S D TIK+W++ D SCLKTFEGH +SVL+ +F++RGAQ++S G+DGL+KLWT+++ EC+
Sbjct: 540 SADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSNECVR 599
Query: 501 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELEN 560
T D HEDK+W L + + TGGSD+ + LW D T V++ QEL+N
Sbjct: 600 TLDAHEDKVWGLHCSRLDDHAITGGSDSRIILWKDVTEAEQAEEQAKREEQVIKQQELDN 659
Query: 561 AVLDADYTKAIQVAFELRRPHKLFELFASVCRKREAELQIEKALHALGKEEIRQLLEYVR 620
+ + Y +A+ +A L RPH + + ++ R EA ++E + L +++ LL +
Sbjct: 660 LLHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACEKLEATVLRLRRDQKEALLRFCI 719
Query: 621 EWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEGLIPYTQRHFSRIDRLVRSTF 680
WNT + CH AQ VL L P E++ G+ LE L+PYT+RHF R+ R +++
Sbjct: 720 TWNTNSRHCHEAQAVLGVLLRHEAPEELLAYDGVRGALEALLPYTERHFQRLSRTLQAAT 779
Query: 681 LLDYTLTGMSV 691
LD+ M +
Sbjct: 780 FLDFLWHNMKL 790
Score = 350 (128.3 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
Identities = 71/170 (41%), Positives = 100/170 (58%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWD+ + TH+F+G GVV + FHPD + LLFS + D ++RVW L + C
Sbjct: 128 GCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSC 187
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 126
+A L H+S VTS++ + DG T++S+GRDK+ +WDLR Y TVP +E VEA +P
Sbjct: 188 LAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLRSYETSRTVPVFESVEASVLLPE 247
Query: 127 GSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQ 175
A + K L HF+T G++GI+R+W A S C+Y Q
Sbjct: 248 EPAL----------ALGVKNSGL--HFLTAGDQGILRVWEAASGQCVYTQ 285
Score = 172 (65.6 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 81/361 (22%), Positives = 144/361 (39%)
Query: 177 SSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLV 236
S D+ S E +D + TA + P ++ L VTA + LLL + L K +
Sbjct: 54 SGDLIRSLEQEDQE-DITAFDLSPDDEVL--VTASRALLLAQWAW--REGTVARLWKAI- 107
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 296
+ + + F LA V+V+D+ ++ G S V+ L
Sbjct: 108 -HTAPVASMAF-DATSTLLATGGCDGAVRVWDIVQHYGTHHFRG-SPGVVHLVAFHPDPT 164
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
++L+ + + D S+R+W + R C+ V T H AV +++FS+ L SG D VW
Sbjct: 165 RLLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGR-DKICIVWD 223
Query: 357 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV 416
P+ +A V + +L V + T VW V
Sbjct: 224 LRSYETSRTVPVFESVEASVLLPEEPALALGVKNSGLHFLTAGDQGILRVWEAASGQCVY 283
Query: 417 T---FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
T G ++ + + +++T + D + ++ K F G++ VL FL
Sbjct: 284 TQPQMSGLRQELTHCTLARAAGLLLTVTADHNLLLYEARSLQLQKQFAGYSEEVLDVRFL 343
Query: 474 -TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 532
+ I+ +K++ ++T C + H D + AL V +K +FA+ D + +
Sbjct: 344 GPNDSHIIVASNSPCLKVFELQTLACQILHG-HTDIVLALDVFRKGWLFASCAKDQSIRI 402
Query: 533 W 533
W
Sbjct: 403 W 403
Score = 147 (56.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 32/108 (29%), Positives = 57/108 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W + F GH+ + ++ F P TD+ +L + S D T+++W L C+
Sbjct: 500 DRTAKLWALPQCQLLGVFSGHRRGLWNVQFSP-TDQ-VLATASADGTIKLWALQDFSCLK 557
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
T + H + V +A S G+ L+S+G D ++ LW ++ C T+ +E
Sbjct: 558 TFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSNECVRTLDAHE 605
Score = 90 (36.7 bits), Expect = 4.3e-113, Sum P(2) = 4.3e-113
Identities = 35/116 (30%), Positives = 52/116 (44%)
Query: 4 LLEGADRKVLV--WDVDGGFCTHYFKG-HKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
+L A R +L+ W G +K H V+S+ F D +LL +G D VRVWD
Sbjct: 80 VLVTASRALLLAQWAWREGTVARLWKAIHTAPVASMAF--DATSTLLATGGCDGAVRVWD 137
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTVPT 114
++ V +A D + L+ S+ D + +W L+D SC L V T
Sbjct: 138 IVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSC-LAVLT 192
Score = 85 (35.0 bits), Expect = 1.4e-112, Sum P(2) = 1.4e-112
Identities = 27/115 (23%), Positives = 46/115 (40%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VW + C H V+S+ F D ++L SG D + VWDL + +
Sbjct: 174 DTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSED-GHTMLSSGRDKICI-VWDLRSYETSR 231
Query: 69 TLDKHFSRVTS----------MAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVP 113
T+ S S + + + G ++AG ++ +W+ C T P
Sbjct: 232 TVPVFESVEASVLLPEEPALALGVKNSGLHFLTAGDQGILRVWEAASGQCVYTQP 286
Score = 60 (26.2 bits), Expect = 6.3e-110, Sum P(2) = 6.3e-110
Identities = 20/68 (29%), Positives = 30/68 (44%)
Query: 38 FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK--HFSRVTSMAITSDGSTLISAGRD 95
F D +L + S + W + VA L K H + V SMA + + L + G D
Sbjct: 72 FDLSPDDEVLVTASRALLLAQW-AWREGTVARLWKAIHTAPVASMAFDATSTLLATGGCD 130
Query: 96 KVVNLWDL 103
V +WD+
Sbjct: 131 GAVRVWDI 138
Score = 53 (23.7 bits), Expect = 3.4e-109, Sum P(2) = 3.4e-109
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 4 LLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL--------LFSGSDDAT 55
L G D+ +VWD+ + + V +S+L + +L + D
Sbjct: 211 LSSGRDKICIVWDLRSYETSRTVPVFESVEASVLLPEEPALALGVKNSGLHFLTAGDQGI 270
Query: 56 VRVWDLLAKKCVAT 69
+RVW+ + +CV T
Sbjct: 271 LRVWEAASGQCVYT 284
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 1052 (375.4 bits), Expect = 1.0e-139, Sum P(2) = 1.0e-139
Identities = 219/554 (39%), Positives = 332/554 (59%)
Query: 147 RSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGL 205
+S +HF+T G++GI+R+W A S C+Y Q +M ++ T T+ + L
Sbjct: 256 KSSGLHFLTAGDQGILRVWEAASGQCVYTQP--------QMPGLRQELTHCTLARAADLL 307
Query: 206 LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQ 265
L VTAD LLLY + L L K+ GY+EE+LD++FLG + ++ VA+N ++
Sbjct: 308 LTVTADHNLLLY-------EAHSLQLQKQFAGYSEEVLDVRFLGPSDSHIVVASNSPCLK 360
Query: 266 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR---CCVGV 322
V++L +++C +L GH++IVL LD G L + +KD S+R+W CV
Sbjct: 361 VFELQTLACQ-ILHGHTDIVLALDV--FRKGW-LFASCAKDQSIRIWKMNKAGQVACVAQ 416
Query: 323 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF-DGL---SDDAEQ-PMNLKAKAVVA 377
G+GH +VG + S+ ++FLV+GS D T+K+W + L S A+ P+ L+A+
Sbjct: 417 GSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRR 476
Query: 378 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 437
H KDINSLAV+PND L+ TGSQDRTA +W LP + F GH+RG+W+V+FSP DQV+
Sbjct: 477 CHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVL 536
Query: 438 ITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE 497
TAS D TIK+W++ D SCLKTFEGH +SVL+ +F++RG+Q++S G+DGL+KLWT+++ E
Sbjct: 537 ATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSNE 596
Query: 498 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQE 557
C+ T D HEDK+W L + + TGGSD+ + LW D T V++ QE
Sbjct: 597 CVRTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILWKDVTEAEQAEEQAKREEQVIKQQE 656
Query: 558 LENAVLDADYTKAIQVAFELRRPHKLFELFASVCRKREAELQIEKALHALGKEEIRQLLE 617
L+N + + Y +A+ +A L RPH + + ++ R EA ++E + L +++ LL
Sbjct: 657 LDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACEKLEATVLRLRRDQKEALLR 716
Query: 618 YVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEGLIPYTQRHFSRIDRLVR 677
+ WNT + CH AQ VL L P E++ G+ LE L+PYT+RHF R+ R ++
Sbjct: 717 FCVTWNTNSRHCHEAQAVLGVLLRHEAPEELLAYDGVRGSLEALLPYTERHFQRLSRTLQ 776
Query: 678 STFLLDYTLTGMSV 691
+ LD+ M +
Sbjct: 777 AATFLDFLWHNMKL 790
Score = 336 (123.3 bits), Expect = 1.0e-139, Sum P(2) = 1.0e-139
Identities = 70/170 (41%), Positives = 101/170 (59%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWD+ + TH+F+G GVV + FHPD + LLFS + D ++RVW L + C
Sbjct: 128 GCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSC 187
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 126
+A L H+S VTS++ + G T++S+GRDK+ +WDL+ Y TVP +E VEA +P
Sbjct: 188 LAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQSYQTTRTVPVFESVEASVLLPE 247
Query: 127 GSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQ 175
A L +K S +HF+T G++GI+R+W A S C+Y Q
Sbjct: 248 QPA--PALG------VK----SSGLHFLTAGDQGILRVWEAASGQCVYTQ 285
Score = 171 (65.3 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 55/241 (22%), Positives = 99/241 (41%)
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
++L+ + + D S+R+W + R C+ V T H AV +++FS+ L SG D VW
Sbjct: 165 RLLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGR-DKICIVWD 223
Query: 357 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV 416
P+ +A V + +L V + T VW V
Sbjct: 224 LQSYQTTRTVPVFESVEASVLLPEQPAPALGVKSSGLHFLTAGDQGILRVWEAASGQCVY 283
Query: 417 T---FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
T G ++ + + +++T + D + ++ K F G++ VL FL
Sbjct: 284 TQPQMPGLRQELTHCTLARAADLLLTVTADHNLLLYEAHSLQLQKQFAGYSEEVLDVRFL 343
Query: 474 -TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 532
+ IV +K++ ++T C + H D + AL V +K +FA+ D + +
Sbjct: 344 GPSDSHIVVASNSPCLKVFELQTLACQILHG-HTDIVLALDVFRKGWLFASCAKDQSIRI 402
Query: 533 W 533
W
Sbjct: 403 W 403
Score = 166 (63.5 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 64/285 (22%), Positives = 112/285 (39%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES---RCCV 320
++V+ L SC VL H V L + S G +++ +D +WD +S V
Sbjct: 177 IRVWSLQDRSCLAVLTAHYSAVTSL---SFSEGGHTMLSSGRDKICIVWDLQSYQTTRTV 233
Query: 321 GVGTGHMGAV-----GAVAFSKKLQ--NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 373
V +V A A K +FL +G ++VW +A + +
Sbjct: 234 PVFESVEASVLLPEQPAPALGVKSSGLHFLTAGDQG-ILRVW-------EAASGQCVYTQ 285
Query: 374 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF-SP 432
+ +++ +A L+ T + D ++ L F G+ + V F P
Sbjct: 286 PQMPGLRQELTHCTLARAADLLLTVTADHNLLLYEAHSLQLQKQFAGYSEEVLDVRFLGP 345
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
D ++ AS +K++ + +C + GHT VL +G SC D +++W
Sbjct: 346 SDSHIVVASNSPCLKVFELQTLAC-QILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWK 404
Query: 493 V-RTGE--CIATYDKHEDKIWALAVGKKTEMF-ATGGSDALVNLW 533
+ + G+ C+A H + + + E F TG D V LW
Sbjct: 405 MNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLW 449
Score = 155 (59.6 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 377 AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF--SPVD 434
A H + S+A +L+ TG D VW + FRG + V F P
Sbjct: 106 AIHTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTR 165
Query: 435 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
++ +++ D +I++WS+ D SCL H S+V SF G ++S G D + +W ++
Sbjct: 166 LLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQ 225
Query: 495 ---TGECIATYDKHEDKIW-----ALAVGKKTE--MFATGGSDALVNLW 533
T + ++ E + A A+G K+ F T G ++ +W
Sbjct: 226 SYQTTRTVPVFESVEASVLLPEQPAPALGVKSSGLHFLTAGDQGILRVW 274
Score = 149 (57.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W + F GH+ + ++ F P TD+ +L + S D T+++W L C+
Sbjct: 500 DRTAKLWALPQCQLLGVFTGHRRGLWNVQFSP-TDQ-VLATASADGTIKLWALQDFSCLK 557
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
T + H + V +A S GS L+S+G D ++ LW ++ C T+ +E
Sbjct: 558 TFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSNECVRTLDAHE 605
Score = 97 (39.2 bits), Expect = 1.8e-114, Sum P(2) = 1.8e-114
Identities = 41/138 (29%), Positives = 61/138 (44%)
Query: 4 LLEGADRKVLV--WDVDGGFCTHYFKG-HKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
+L A R +L+ W G T +K H V+S+ F D +LL +G D VRVWD
Sbjct: 80 VLVTASRALLLAQWAWREGTVTRLWKAIHTAPVASMAF--DATSTLLATGGCDGAVRVWD 137
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
++ V +A D + L+ S+ D + +W L+D SC L V T
Sbjct: 138 IVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSC-LAVLTAHY- 195
Query: 119 EAVCAIPPGSAFDSFLSS 136
AV ++ + LSS
Sbjct: 196 SAVTSLSFSEGGHTMLSS 213
Score = 85 (35.0 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 27/115 (23%), Positives = 46/115 (40%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VW + C H V+S+ F + ++L SG D + VWDL + +
Sbjct: 174 DTSIRVWSLQDRSCLAVLTAHYSAVTSLSFS-EGGHTMLSSGRDKICI-VWDLQSYQTTR 231
Query: 69 TLDKHFSRVTS----------MAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVP 113
T+ S S + + S G ++AG ++ +W+ C T P
Sbjct: 232 TVPVFESVEASVLLPEQPAPALGVKSSGLHFLTAGDQGILRVWEAASGQCVYTQP 286
Score = 59 (25.8 bits), Expect = 1.9e-110, Sum P(2) = 1.9e-110
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 4 LLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF--HPDTDKSLLFSG------SDDAT 55
L G D+ +VWD+ T + V +S+L P + SG D
Sbjct: 211 LSSGRDKICIVWDLQSYQTTRTVPVFESVEASVLLPEQPAPALGVKSSGLHFLTAGDQGI 270
Query: 56 VRVWDLLAKKCVAT 69
+RVW+ + +CV T
Sbjct: 271 LRVWEAASGQCVYT 284
Score = 57 (25.1 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 25/96 (26%), Positives = 41/96 (42%)
Query: 11 KVLVWDVDGGFCTHYFKGH-KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVAT 69
KV + DV G + + ++S PD + +L + S + W + V
Sbjct: 46 KVNILDVASGALLRSLEQEDQEDITSFDLSPDDE--VLVTASRALLLAQW-AWREGTVTR 102
Query: 70 LDK--HFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
L K H + V SMA + + L + G D V +WD+
Sbjct: 103 LWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDI 138
Score = 46 (21.3 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 11/51 (21%), Positives = 26/51 (50%)
Query: 56 VRVWDLLAKKCVATLDKHFSR-VTSMAITSDGSTLISAGRDKVVNLWDLRD 105
V + D+ + + +L++ +TS ++ D L++A R ++ W R+
Sbjct: 47 VNILDVASGALLRSLEQEDQEDITSFDLSPDDEVLVTASRALLLAQWAWRE 97
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 1039 (370.8 bits), Expect = 2.1e-139, Sum P(2) = 2.1e-139
Identities = 220/557 (39%), Positives = 328/557 (58%)
Query: 147 RSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGL 205
+S +HF+T G++G++R+W A S C+Y Q + ++G T T+ S L
Sbjct: 253 KSKGLHFLTAGDQGLLRVWEAASGQCVYAQP--------QPPGPRQGLTHCTLAQSAGLL 304
Query: 206 LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQ 265
L VT D LLLY + L L K+ GY+EE+LD++FLG E+ ++ VA+N ++
Sbjct: 305 LSVTTDHNLLLY-------EARSLQLQKQFAGYSEEVLDVRFLGPEDSHIVVASNSPSLK 357
Query: 266 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESR-CCVGV 322
V++L +M+C +L GH++IVL LD G+ L + +KD S+ +W + R CV
Sbjct: 358 VFELQTMTCQ-ILHGHTDIVLALDV--FRKGR-LFASCAKDQSICIWRMNKAGRVACVAQ 413
Query: 323 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD------GLSDDAEQPMNLKAKAVV 376
G+GH +VG + S+ + FLV+GS D T+K+W G + D+ P+ L+A+A
Sbjct: 414 GSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPIPEALLSKGTAPDSG-PILLQAQATQ 472
Query: 377 AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQV 436
H KDINS+AVAPND L+ TGSQDRTA +W LP + F GH+RG+W V+FSP+DQV
Sbjct: 473 RCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMDQV 532
Query: 437 VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVS--CGADGLVKLWTVR 494
+ TAS D TIK+W++ D SCLKTFEGH +SVL+ F++RG Q++S G+DGLVKLWT++
Sbjct: 533 LATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSRPSGSDGLVKLWTIK 592
Query: 495 TGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLR 554
EC+ T D HEDK+W L + + TG SD+ V LW D T V++
Sbjct: 593 NNECVKTLDAHEDKVWGLHCSRLDDRALTGASDSCVILWKDVTEEEQSEEQARREEEVVK 652
Query: 555 GQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCRKREAELQIEKALHALGKEEIRQ 614
QEL+N + + Y +A+ +A L RPH + + ++ R EA ++ + L +++
Sbjct: 653 QQELDNLLYEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACKKLGATVLRLRRDQKEA 712
Query: 615 LLEYVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEGLIPYTQRHFSRIDR 674
LL + WNT + CH AQ VL L P E++ G+ LE L+PYT+RHF R+ R
Sbjct: 713 LLRFCVTWNTNSRHCHEAQAVLGVLLRHEAPEELLAYPGVQASLEALLPYTERHFQRLSR 772
Query: 675 LVRSTFLLDYTLTGMSV 691
+++ LD+ M +
Sbjct: 773 TLQAATFLDFLWHNMKL 789
Score = 346 (126.9 bits), Expect = 2.1e-139, Sum P(2) = 2.1e-139
Identities = 67/170 (39%), Positives = 104/170 (61%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWD+ + TH+F+G GVV + FHPD + LLFS + DAT+R+W L + C
Sbjct: 125 GCDGAVRVWDIVRHYGTHHFRGSPGVVHLVTFHPDPARLLLFSSAADATIRMWSLQDQSC 184
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 126
+A + H+S VTS+ ++DG T++S+GRDK+ +WDL+ + TVP +E VEA +P
Sbjct: 185 LAVMTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLQSHQATRTVPVFESVEAAVLLP- 243
Query: 127 GSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQ 175
+ + + +K K +HF+T G++G++R+W A S C+Y Q
Sbjct: 244 ----EELVPKLD---VKSKG----LHFLTAGDQGLLRVWEAASGQCVYAQ 282
Score = 166 (63.5 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 60/278 (21%), Positives = 106/278 (38%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++++ L SC V+ H V L A G ++ +G +D +WD +S
Sbjct: 174 IRMWSLQDQSCLAVMTAHYSAVTSLTFSA--DGHTMLSSG-RDKICVIWDLQSHQATRTV 230
Query: 324 TGHMGAVGAVAFSKKLQNFL-VSGSSDHTIKVWSFDGLSD--DAEQPMNLKAKAVVAAHG 380
AV ++L L V H + GL +A + A+
Sbjct: 231 PVFESVEAAVLLPEELVPKLDVKSKGLHFLTAGD-QGLLRVWEAASGQCVYAQPQPPGPR 289
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF-SPVDQVVIT 439
+ + +A + L+ + + D ++ L F G+ + V F P D ++
Sbjct: 290 QGLTHCTLAQSAGLLLSVTTDHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPEDSHIVV 349
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV-RTGE- 497
AS ++K++ + +C + GHT VL +G SC D + +W + + G
Sbjct: 350 ASNSPSLKVFELQTMTC-QILHGHTDIVLALDVFRKGRLFASCAKDQSICIWRMNKAGRV 408
Query: 498 -CIATYDKHEDKIWALAVGKKTEMF-ATGGSDALVNLW 533
C+A H + + + E F TG D V LW
Sbjct: 409 ACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLW 446
Score = 160 (61.4 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 377 AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF--SPVD 434
A H + ++A P +L+ TG D VW + FRG + V F P
Sbjct: 103 AIHTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVTFHPDPAR 162
Query: 435 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
++ +++ D TI++WS+ D SCL H S+V +F G ++S G D + +W ++
Sbjct: 163 LLLFSSAADATIRMWSLQDQSCLAVMTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLQ 222
Query: 495 TGECIAT---YDK-------HEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ + T ++ E+ + L V K F T G L+ +W
Sbjct: 223 SHQATRTVPVFESVEAAVLLPEELVPKLDVKSKGLHFLTAGDQGLLRVW 271
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 31/110 (28%), Positives = 55/110 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W + F GH+ + + F P D+ +L + S D T+++W L C+
Sbjct: 497 DRTAKLWALPHCQLLGIFSGHRRGLWCVQFSP-MDQ-VLATASADGTIKLWALQDFSCLK 554
Query: 69 TLDKHFSRVTSMAITSDGSTLIS--AGRDKVVNLWDLRDYSCKLTVPTYE 116
T + H + V + S G+ L+S +G D +V LW +++ C T+ +E
Sbjct: 555 TFEGHDASVLKVVFVSRGTQLLSRPSGSDGLVKLWTIKNNECVKTLDAHE 604
Score = 96 (38.9 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 39/138 (28%), Positives = 62/138 (44%)
Query: 4 LLEGADRKVLV--WDVDGGFCTHYFKG-HKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
+L A R +L+ W G T +K H V+++ F P + +LL +G D VRVWD
Sbjct: 77 VLVTATRALLLAQWAWREGSITRLWKAIHTAPVATMAFDPTS--TLLATGGCDGAVRVWD 134
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
++ V + D + L+ S+ D + +W L+D SC L V T
Sbjct: 135 IVRHYGTHHFRGSPGVVHLVTFHPDPARLLLFSSAADATIRMWSLQDQSC-LAVMTAHY- 192
Query: 119 EAVCAIPPGSAFDSFLSS 136
AV ++ + + LSS
Sbjct: 193 SAVTSLTFSADGHTMLSS 210
Score = 85 (35.0 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
Identities = 27/116 (23%), Positives = 46/116 (39%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +W + C H V+S+ F D ++L SG D V +WDL + +
Sbjct: 170 ADATIRMWSLQDQSCLAVMTAHYSAVTSLTFSAD-GHTMLSSGRDKICV-IWDLQSHQAT 227
Query: 68 ATLDKHFS----------RVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVP 113
T+ S V + + S G ++AG ++ +W+ C P
Sbjct: 228 RTVPVFESVEAAVLLPEELVPKLDVKSKGLHFLTAGDQGLLRVWEAASGQCVYAQP 283
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 1046 (373.3 bits), Expect = 2.7e-139, Sum P(2) = 2.7e-139
Identities = 221/554 (39%), Positives = 328/554 (59%)
Query: 147 RSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGL 205
+S +HF+T G++G +R+W A S C++ Q+ + R T T+ + L
Sbjct: 256 KSAGLHFLTAGDQGALRVWEAASGRCVHAQQ--------RLRGPGRELTHCTLAHAAGLL 307
Query: 206 LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQ 265
L VTAD LLLY L L K+ GY+EE+LD++FLG E+ ++ VA+N ++
Sbjct: 308 LSVTADHNLLLYDA-------HSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLK 360
Query: 266 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW---DSESRCCVGV 322
V+DL + +C +L GH++IVL LD G+ L + +KD S+R+W S CV
Sbjct: 361 VFDLQTSACQ-ILHGHTDIVLALDV--FRKGR-LFASCAKDQSIRVWRMNKSGEVACVAQ 416
Query: 323 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG--LSDDAEQ---PMNLKAKAVVA 377
G+GH +VG + S+ + FLV+GS D T+K+W LS P+ L+A+A
Sbjct: 417 GSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQR 476
Query: 378 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 437
H KDINS+AVAPND L+ TGSQDRTA +W LP + TF GH+RG+W V+FSP+DQV+
Sbjct: 477 CHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVL 536
Query: 438 ITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE 497
TAS D TIK+W++ D SCLKTFEGH +SVL+ +F++RG Q++S G+DGL+KLWT++ E
Sbjct: 537 ATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNE 596
Query: 498 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQE 557
C+ T D HEDK+W L + + TG SD+ V LW D T V++ QE
Sbjct: 597 CVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLWKDVTEAEQAEEQAKREEQVVKQQE 656
Query: 558 LENAVLDADYTKAIQVAFELRRPHKLFELFASVCRKREAELQIEKALHALGKEEIRQLLE 617
L+N + + Y +A+ +A L RPH + + ++ R E+ ++E + L +++ LL
Sbjct: 657 LDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPESCEKLETTVLQLRRDQKEALLR 716
Query: 618 YVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEGLIPYTQRHFSRIDRLVR 677
+ WNT + CH AQ VL L P E++ G+ LEGL+PYT+RHF R+ R+++
Sbjct: 717 FCVTWNTNSRHCHEAQAVLGVLLRHEAPDELLTYDGVRASLEGLLPYTERHFQRLSRMLQ 776
Query: 678 STFLLDYTLTGMSV 691
+ LD+ M +
Sbjct: 777 AATFLDFLWHNMKL 790
Score = 338 (124.0 bits), Expect = 2.7e-139, Sum P(2) = 2.7e-139
Identities = 69/171 (40%), Positives = 101/171 (59%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWDV + TH+F+G GVV + FHPD + LLFS + D ++RVW L + C
Sbjct: 128 GCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSC 187
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 126
+A L H+S VTS+ ++DG T++S+GRDK+ +WDLR TVP +E VEA +P
Sbjct: 188 LAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPE 247
Query: 127 GSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQK 176
A + +K S +HF+T G++G +R+W A S C++ Q+
Sbjct: 248 EPA--------PELGVK----SAGLHFLTAGDQGALRVWEAASGRCVHAQQ 286
Score = 180 (68.4 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 63/277 (22%), Positives = 108/277 (38%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+ L SC VL H V L A G ++ +G +D +WD S
Sbjct: 177 IRVWSLQERSCLAVLTAHYSAVTSLTFSA--DGHTMLSSG-RDKICVIWDLRSLQATRTV 233
Query: 324 TGHMGAVGAVAFSKKLQNFL-VSGSSDHTIKVWSFDGLSD-DAEQPMNLKAKAVVAAHGK 381
AV ++ L V + H + L +A + A+ + G+
Sbjct: 234 PVFESVEAAVLLPEEPAPELGVKSAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGR 293
Query: 382 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF-SPVDQVVITA 440
++ +A L+ + + D ++ L F G+ + V F P D V+ A
Sbjct: 294 ELTHCTLAHAAGLLLSVTADHNLLLYDAHSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVA 353
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV-RTGE-- 497
S +K++ + +C + GHT VL +G SC D +++W + ++GE
Sbjct: 354 SNSPCLKVFDLQTSAC-QILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVA 412
Query: 498 CIATYDKHEDKIWALAVGKKTEMF-ATGGSDALVNLW 533
C+A H + + + E F TG D V LW
Sbjct: 413 CVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLW 449
Score = 171 (65.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 53/241 (21%), Positives = 96/241 (39%)
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
++L+ + + D S+R+W + R C+ V T H AV ++ FS L SG D +W
Sbjct: 165 RLLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGR-DKICVIWD 223
Query: 357 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD---LV 413
L P+ +A V + L V T VW +
Sbjct: 224 LRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSAGLHFLTAGDQGALRVWEAASGRCVH 283
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
+ RG R + + ++++ + D + ++ K F G++ VL FL
Sbjct: 284 AQQRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDAHSLRLRKQFAGYSEEVLDVRFL 343
Query: 474 -TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 532
+ +V +K++ ++T C + H D + AL V +K +FA+ D + +
Sbjct: 344 GPEDSHVVVASNSPCLKVFDLQTSACQILHG-HTDIVLALDVFRKGRLFASCAKDQSIRV 402
Query: 533 W 533
W
Sbjct: 403 W 403
Score = 150 (57.9 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 377 AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF--SPVD 434
A H + ++A P +L+ TG D VW + FRG + V F P
Sbjct: 106 AIHTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPAR 165
Query: 435 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
++ +++ D +I++WS+ + SCL H S+V +F G ++S G D + +W +R
Sbjct: 166 LLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLR 225
Query: 495 TGECIAT 501
+ + T
Sbjct: 226 SLQATRT 232
Score = 139 (54.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W + F GH+ + + F P D+ +L + S D T+++W L C+
Sbjct: 500 DRTAKLWALPRCQLLGTFSGHRRGLWCVQFSP-MDQ-VLATASADGTIKLWALQDFSCLK 557
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
T + H + V +A S G+ L+S+G D ++ LW +++ C T+ +E
Sbjct: 558 TFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHE 605
Score = 126 (49.4 bits), Expect = 0.00035, P = 0.00035
Identities = 58/242 (23%), Positives = 96/242 (39%)
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHM----GAVGAVAFSKKLQNFLV- 344
T A L+ TG D +VR+WD RC GT H G V VAF L+
Sbjct: 114 TMAFDPTSTLLATGGCDGAVRVWDVV-RC---YGTHHFRGSPGVVHLVAFHPDPARLLLF 169
Query: 345 SGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTA 404
S ++D +I+VWS S AV+ AH + SL + + + + +D+
Sbjct: 170 SSAADTSIRVWSLQERS----------CLAVLTAHYSAVTSLTFSADGHTMLSSGRDKIC 219
Query: 405 CVWRLPDLVSVVT---FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE 461
+W L L + T F + + E P ++ + ++G + + D L+ +E
Sbjct: 220 VIWDLRSLQATRTVPVFESVEAAVLLPE-EPAPELGVKSAG---LHFLTAGDQGALRVWE 275
Query: 462 GHTSSVLRASFLTRGA--QIVSCG-ADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 518
+ + A RG ++ C A L +V + YD H ++ G
Sbjct: 276 AASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDAHSLRLRKQFAGYSE 335
Query: 519 EM 520
E+
Sbjct: 336 EV 337
Score = 104 (41.7 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 43/142 (30%), Positives = 68/142 (47%)
Query: 4 LLEGADRKVLV--WDVDGGFCTHYFKG-HKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
+L A R +L+ W G T +K H V+++ F P + +LL +G D VRVWD
Sbjct: 80 VLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTS--TLLATGGCDGAVRVWD 137
Query: 61 LLAKKCVATLDKHFSR----VTSMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTVPT 114
++ +C T HF V +A D + L+ S+ D + +W L++ SC L V T
Sbjct: 138 VV--RCYGT--HHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSC-LAVLT 192
Query: 115 YEMVEAVCAIPPGSAFDSFLSS 136
AV ++ + + LSS
Sbjct: 193 AHY-SAVTSLTFSADGHTMLSS 213
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 1046 (373.3 bits), Expect = 2.7e-139, Sum P(2) = 2.7e-139
Identities = 221/554 (39%), Positives = 328/554 (59%)
Query: 147 RSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGL 205
+S +HF+T G++G +R+W A S C++ Q+ + R T T+ + L
Sbjct: 256 KSAGLHFLTAGDQGALRVWEAASGRCVHAQQ--------RLRGPGRELTHCTLAHAAGLL 307
Query: 206 LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQ 265
L VTAD LLLY L L K+ GY+EE+LD++FLG E+ ++ VA+N ++
Sbjct: 308 LSVTADHNLLLYDA-------RSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLK 360
Query: 266 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW---DSESRCCVGV 322
V+DL + +C +L GH++IVL LD G+ L + +KD S+R+W S CV
Sbjct: 361 VFDLQTSACQ-ILHGHTDIVLALDV--FRKGR-LFASCAKDQSIRVWRMNKSGEVACVAQ 416
Query: 323 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG--LSDDAEQ---PMNLKAKAVVA 377
G+GH +VG + S+ + FLV+GS D T+K+W LS P+ L+A+A
Sbjct: 417 GSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQH 476
Query: 378 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 437
H KDINS+AVAPND L+ TGSQDRTA +W LP + TF GH+RG+W V+FSP+DQV+
Sbjct: 477 CHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVL 536
Query: 438 ITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE 497
TAS D TIK+W++ D SCLKTFEGH +SVL+ +F++RG Q++S G+DGL+KLWT++ E
Sbjct: 537 ATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNE 596
Query: 498 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQE 557
C+ T D HEDK+W L + + TG SD+ V LW D T V++ QE
Sbjct: 597 CVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLWKDVTEAEQAEEQAKREEQVVKQQE 656
Query: 558 LENAVLDADYTKAIQVAFELRRPHKLFELFASVCRKREAELQIEKALHALGKEEIRQLLE 617
L+N + + Y +A+ +A L RPH + + ++ R E+ ++E + L +++ LL
Sbjct: 657 LDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPESCEKLETTVLQLRRDQKEALLR 716
Query: 618 YVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEGLIPYTQRHFSRIDRLVR 677
+ WNT + CH AQ VL L P E++ G+ LEGL+PYT+RHF R+ R+++
Sbjct: 717 FCVTWNTNSRHCHEAQAVLGVLLRHEAPDELLTYDGVRASLEGLLPYTERHFQRLSRMLQ 776
Query: 678 STFLLDYTLTGMSV 691
+ LD+ M +
Sbjct: 777 AATFLDFLWHNMKL 790
Score = 338 (124.0 bits), Expect = 2.7e-139, Sum P(2) = 2.7e-139
Identities = 69/171 (40%), Positives = 101/171 (59%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWDV + TH+F+G GVV + FHPD + LLFS + D ++RVW L + C
Sbjct: 128 GCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSC 187
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 126
+A L H+S VTS+ ++DG T++S+GRDK+ +WDLR TVP +E VEA +P
Sbjct: 188 LAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPE 247
Query: 127 GSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQK 176
A + +K S +HF+T G++G +R+W A S C++ Q+
Sbjct: 248 EPA--------PELGVK----SAGLHFLTAGDQGALRVWEAASGRCVHAQQ 286
Score = 180 (68.4 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 63/277 (22%), Positives = 108/277 (38%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+ L SC VL H V L A G ++ +G +D +WD S
Sbjct: 177 IRVWSLQERSCLAVLTAHYSAVTSLTFSA--DGHTMLSSG-RDKICVIWDLRSLQATRTV 233
Query: 324 TGHMGAVGAVAFSKKLQNFL-VSGSSDHTIKVWSFDGLSD-DAEQPMNLKAKAVVAAHGK 381
AV ++ L V + H + L +A + A+ + G+
Sbjct: 234 PVFESVEAAVLLPEEPAPELGVKSAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGR 293
Query: 382 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF-SPVDQVVITA 440
++ +A L+ + + D ++ L F G+ + V F P D V+ A
Sbjct: 294 ELTHCTLAHAAGLLLSVTADHNLLLYDARSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVA 353
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV-RTGE-- 497
S +K++ + +C + GHT VL +G SC D +++W + ++GE
Sbjct: 354 SNSPCLKVFDLQTSAC-QILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVA 412
Query: 498 CIATYDKHEDKIWALAVGKKTEMF-ATGGSDALVNLW 533
C+A H + + + E F TG D V LW
Sbjct: 413 CVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLW 449
Score = 171 (65.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 53/241 (21%), Positives = 96/241 (39%)
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
++L+ + + D S+R+W + R C+ V T H AV ++ FS L SG D +W
Sbjct: 165 RLLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGR-DKICVIWD 223
Query: 357 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD---LV 413
L P+ +A V + L V T VW +
Sbjct: 224 LRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSAGLHFLTAGDQGALRVWEAASGRCVH 283
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
+ RG R + + ++++ + D + ++ K F G++ VL FL
Sbjct: 284 AQQRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDARSLRLRKQFAGYSEEVLDVRFL 343
Query: 474 -TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 532
+ +V +K++ ++T C + H D + AL V +K +FA+ D + +
Sbjct: 344 GPEDSHVVVASNSPCLKVFDLQTSACQILHG-HTDIVLALDVFRKGRLFASCAKDQSIRV 402
Query: 533 W 533
W
Sbjct: 403 W 403
Score = 150 (57.9 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 377 AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF--SPVD 434
A H + ++A P +L+ TG D VW + FRG + V F P
Sbjct: 106 AIHTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPAR 165
Query: 435 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
++ +++ D +I++WS+ + SCL H S+V +F G ++S G D + +W +R
Sbjct: 166 LLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLR 225
Query: 495 TGECIAT 501
+ + T
Sbjct: 226 SLQATRT 232
Score = 139 (54.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W + F GH+ + + F P D+ +L + S D T+++W L C+
Sbjct: 500 DRTAKLWALPRCQLLGTFSGHRRGLWCVQFSP-MDQ-VLATASADGTIKLWALQDFSCLK 557
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
T + H + V +A S G+ L+S+G D ++ LW +++ C T+ +E
Sbjct: 558 TFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHE 605
Score = 104 (41.7 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 43/142 (30%), Positives = 68/142 (47%)
Query: 4 LLEGADRKVLV--WDVDGGFCTHYFKG-HKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
+L A R +L+ W G T +K H V+++ F P + +LL +G D VRVWD
Sbjct: 80 VLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTS--TLLATGGCDGAVRVWD 137
Query: 61 LLAKKCVATLDKHFSR----VTSMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTVPT 114
++ +C T HF V +A D + L+ S+ D + +W L++ SC L V T
Sbjct: 138 VV--RCYGT--HHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSC-LAVLT 192
Query: 115 YEMVEAVCAIPPGSAFDSFLSS 136
AV ++ + + LSS
Sbjct: 193 AHY-SAVTSLTFSADGHTMLSS 213
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 1028 (366.9 bits), Expect = 1.3e-137, Sum P(2) = 1.3e-137
Identities = 220/557 (39%), Positives = 324/557 (58%)
Query: 147 RSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGL 205
+S ++F+T G++G +R+W A S C+Y Q E+ TA VL +
Sbjct: 256 KSPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGP-GQELTHCTLAHTAGVVLTA---- 310
Query: 206 LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQ 265
TAD LLLY + L L K+ GY+EE+LD++FLG E+ ++ VA+N ++
Sbjct: 311 ---TADHNLLLY-------EARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLK 360
Query: 266 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR---CCVGV 322
V++L + +C +L GH++IVL LD G L + +KD SVR+W CV
Sbjct: 361 VFELQTSACQ-ILHGHTDIVLALDV--FRKGW-LFASCAKDQSVRIWRMNKAGQVMCVAQ 416
Query: 323 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG--LSDDAEQ---PMNLKAKAVVA 377
G+GH +VG V S+ ++FLV+GS D T+K+W LS + P+ L+A+
Sbjct: 417 GSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQR 476
Query: 378 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 437
H KDINS+A+APND L+ TGSQDRTA +W LP + F GH+RG+W V+FSP+DQV+
Sbjct: 477 CHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVL 536
Query: 438 ITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE 497
TAS D TIK+W++ D SCLKTFEGH +SVL+ +F++RG Q++S G+DGLVKLWT++ E
Sbjct: 537 ATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNE 596
Query: 498 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQE 557
C+ T D HEDK+W L + + TG SD+ V LW D T V+R QE
Sbjct: 597 CVRTLDAHEDKVWGLHCSRLDDHALTGASDSRVILWKDVTEAEQAEEQARQEEQVVRQQE 656
Query: 558 LENAVLDADYTKAIQVAFELRRPHKLFELFASVCRKREAELQIEKALHALGKEEIRQLLE 617
L+N + + Y +A+ +A L RPH + + ++ R EA ++E + L +++ LL
Sbjct: 657 LDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACEKLEATMLRLRRDQKEALLR 716
Query: 618 YVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEGLIPYTQRHFSRIDRLVR 677
+ WNT + CH AQ VL L P E++ +G+ LE L+PYT+RHF R+ R ++
Sbjct: 717 FCVTWNTNSRHCHEAQAVLGVLLRREAPEELLAYEGVRAALEALLPYTERHFQRLSRTLQ 776
Query: 678 STFLLDYTLTGMSVIEP 694
+ LD+ M + P
Sbjct: 777 AAAFLDFLWHNMKLPVP 793
Score = 340 (124.7 bits), Expect = 1.3e-137, Sum P(2) = 1.3e-137
Identities = 69/170 (40%), Positives = 101/170 (59%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWD+ + TH+F+G GVV + FHPD + LLFS + DA +RVW L + C
Sbjct: 128 GCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSC 187
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 126
+A L H+S VTS+A ++DG T++S+GRDK+ +WDL+ TVP +E VEA +P
Sbjct: 188 LAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPE 247
Query: 127 GSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQ 175
+Q +K S ++F+T G++G +R+W A S C+Y Q
Sbjct: 248 --------EPVSQLGVK----SPGLYFLTAGDQGTLRVWEAASGQCVYTQ 285
Score = 195 (73.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 89/367 (24%), Positives = 150/367 (40%)
Query: 172 LYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELIL 231
+ E S V S E +D + TA + P N+ L VTA + LLL ++ L
Sbjct: 49 ILEVASGAVLRSLEQEDQE-DITAFDLSPDNEVL--VTASRALLLAQWAW--QEGSVTRL 103
Query: 232 SKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC 291
K + + + + F LA V+V+D+ ++ G S V+ L
Sbjct: 104 WKAI--HTAPVATMAF-DPTSTLLATGGCDGAVRVWDIVRHYGTHHFRG-SPGVVHLVAF 159
Query: 292 ALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHT 351
++L+ + + D ++R+W + R C+ V T H AV ++AFS L SG D
Sbjct: 160 HPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGR-DKI 218
Query: 352 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAV-APNDSLVCTGSQDRTACVWRLP 410
+W P+ +A V + ++ L V +P + G Q T VW
Sbjct: 219 CIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQG-TLRVWEAA 277
Query: 411 DLVSVVTFR---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV 467
V T G + + + VV+TA+ D + ++ K F G++ V
Sbjct: 278 SGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEARSLRLQKQFAGYSEEV 337
Query: 468 LRASFL-TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 526
L FL + +V +K++ ++T C + H D + AL V +K +FA+
Sbjct: 338 LDVRFLGPEDSHVVVASNSPCLKVFELQTSACQILHG-HTDIVLALDVFRKGWLFASCAK 396
Query: 527 DALVNLW 533
D V +W
Sbjct: 397 DQSVRIW 403
Score = 143 (55.4 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 32/108 (29%), Positives = 56/108 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W + F GH+ + + F P D+ +L + S D T+++W L C+
Sbjct: 500 DRTAKLWALPQCQLLGVFSGHRRGLWCVQFSP-MDQ-VLATASADGTIKLWALQDFSCLK 557
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
T + H + V +A S G+ L+S+G D +V LW +++ C T+ +E
Sbjct: 558 TFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHE 605
Score = 100 (40.3 bits), Expect = 3.0e-112, Sum P(2) = 3.0e-112
Identities = 40/138 (28%), Positives = 63/138 (45%)
Query: 4 LLEGADRKVLV--WDVDGGFCTHYFKG-HKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
+L A R +L+ W G T +K H V+++ F P + +LL +G D VRVWD
Sbjct: 80 VLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTS--TLLATGGCDGAVRVWD 137
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
++ V +A D + L+ S+ D + +W L+D SC L V T
Sbjct: 138 IVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSC-LAVLTAHY- 195
Query: 119 EAVCAIPPGSAFDSFLSS 136
AV ++ + + LSS
Sbjct: 196 SAVTSLAFSADGHTMLSS 213
Score = 65 (27.9 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 21/74 (28%), Positives = 35/74 (47%)
Query: 4 LLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF--HPDTD---KS--LLF-SGSDDAT 55
L G D+ ++WD+ T + V +++L P + KS L F + D T
Sbjct: 211 LSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGT 270
Query: 56 VRVWDLLAKKCVAT 69
+RVW+ + +CV T
Sbjct: 271 LRVWEAASGQCVYT 284
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 1198 (426.8 bits), Expect = 3.2e-134, Sum P(2) = 3.2e-134
Identities = 237/538 (44%), Positives = 350/538 (65%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D + +WDV +CTH KG GVV + FHPD + LFS S D +R+WDL + +C
Sbjct: 125 GCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRC 184
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 126
V L+ H+S VT++A + DG TL+S+GRDK+ ++WDL++ K T+P YE VE V +
Sbjct: 185 VCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVVLLS- 243
Query: 127 GSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFE 185
GSA Y++ +K S +H +T G +G++R+W++ S+ C++ Q D + E
Sbjct: 244 GSA------DYSEMGVK----SDALHLVTAGSKGVLRVWDSSSSRCVFTQTLPDASSHTE 293
Query: 186 MDDS----KRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE 241
+D+ + G +LP L+ VTA+ +LLY T P L + ++ VGYN++
Sbjct: 294 DEDAEDEERLGLLQLLLLPRTGRLITVTAEHNILLYQT---PT----LAVQQQFVGYNDD 346
Query: 242 ILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIV 301
+LD+KF+G+++ ++AVATN Q++V++LS+ SC +L GH++ +L +D S +
Sbjct: 347 VLDVKFVGKDDTHIAVATNSSQLKVFELSTNSCQ-ILHGHTDTILSIDVFRKGS---MFA 402
Query: 302 TGSKDNSVRLW--D-SESRC-CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 357
T +KD SVR+W D S R CV GTGH AVG++A S+ Q F+VSGS D T+KVW
Sbjct: 403 TCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDL 462
Query: 358 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 417
+ AE M +KA++ AH KD+NS+ V+PND L+ +GSQDRTA +W L DL +
Sbjct: 463 PETTG-AEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGV 521
Query: 418 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 477
RGH+RG+WSV+FSPVDQ++ +AS D +++IWSI D SCLKTFEGH +SVL+ F++RG
Sbjct: 522 CRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGT 581
Query: 478 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHD 535
Q+VS G+DGLVKLWT++T EC+ T D H+DK+WAL G + E+ TG +D+ + +W D
Sbjct: 582 QLVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWTD 639
Score = 282 (104.3 bits), Expect = 2.9e-30, Sum P(2) = 2.9e-30
Identities = 121/545 (22%), Positives = 223/545 (40%)
Query: 4 LLEGADRKVLV--WDVDGGFCTHYFKG-HKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
+L A R +L+ WD C ++ H V+S+ F D +LL +G D T+++WD
Sbjct: 77 MLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSF--DCTSTLLATGGCDGTIKLWD 134
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTL--ISAGRDKVVNLWDLRDYSCKLTVPT-YEM 117
++ + C L V + D S L S+ D + +WDLR C + + Y
Sbjct: 135 VIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSP 194
Query: 118 VEAVCAIPPG-----SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACL 172
V A+ P G S D S ++ Q +K +R++ ++ G+V + + SA
Sbjct: 195 VTALAFSPDGHTLVSSGRDKICSVWDLQE-QKVKRTIPVYEAV---EGVVLL--SGSADY 248
Query: 173 YEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILS 232
E + SK G S++ CV Q L + ++ E
Sbjct: 249 SEMGVKSDALHLVTAGSK-GVLRVWDSSSSR---CVFT--QTLPDASSHTEDEDAE---D 299
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ +G +L L L + + V + +Y +++ G+++ VL +
Sbjct: 300 EERLG----LLQLLLLPRTGRLITVTAE-HNILLYQTPTLAVQQQFVGYNDDVLDVKFVG 354
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
I + T S + +++++ + C + GH + ++ +K F + D ++
Sbjct: 355 KDDTHIAVATNS--SQLKVFELSTNSCQ-ILHGHTDTILSIDVFRKGSMFATC-AKDKSV 410
Query: 353 KVWSFDGLSDD----AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR 408
+VW D S A+ + A +A + D V T
Sbjct: 411 RVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEG 470
Query: 409 LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 468
+ + + T R H++ + SV SP D+++ + S D+T K+W++SD L GH V
Sbjct: 471 VMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVW 530
Query: 469 RASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 528
F + S ADG V++W+++ C+ T++ H+ + + + + GSD
Sbjct: 531 SVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDG 590
Query: 529 LVNLW 533
LV LW
Sbjct: 591 LVKLW 595
Score = 150 (57.9 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 35/157 (22%), Positives = 70/157 (44%)
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG-HKRGIWSVEFSPVDQVVIT 439
+DI + A++P+D ++ + S+ W ++R H + S+ F ++ T
Sbjct: 64 EDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLAT 123
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF---LTRGAQIVSCGADGLVKLWTVRTG 496
D TIK+W + C +G + V F ++R Q+ S +D +++W +R+
Sbjct: 124 GGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISR-LQLFSSSSDCAIRIWDLRSS 182
Query: 497 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
C+ + H + ALA + G D + ++W
Sbjct: 183 RCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVW 219
Score = 138 (53.6 bits), Expect = 3.2e-134, Sum P(2) = 3.2e-134
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 615 LLEYVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEGLIPYTQRHFSRIDR 674
+L Y WNT + C AQ VL L P E+++ + L+ L+PYT+RH RI+R
Sbjct: 720 VLRYCTVWNTNSRSCLDAQAVLKVLLTHLSPEEMLQFQSAHTHLQALVPYTERHMQRINR 779
Query: 675 LVRSTFLLDYTLTGMSV 691
L++++ LDY M +
Sbjct: 780 LLQASMFLDYMWQKMRI 796
Score = 131 (51.2 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 64/296 (21%), Positives = 116/296 (39%)
Query: 248 LGEEEQYLAVATNIEQVQVYDLSSMSCSYVL-AGHSEIVLCLDTCALSSGKILIVTGSKD 306
L +++ L A+ ++ +D C A HS V + S+ L+ TG D
Sbjct: 71 LSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTST---LLATGGCD 127
Query: 307 NSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNF-LVSGSSDHTIKVWSFDGLSDDAE 365
+++LWD + C G G V V F + L S SSD I++W
Sbjct: 128 GTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDL-------- 179
Query: 366 QPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHK--R 423
+ + V+ +H + +LA +P+ + + +D+ VW L + T ++
Sbjct: 180 --RSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVE 237
Query: 424 GI----WSVEFSPV----DQVVITASGDK-TIKIWSISDGSCLKTFEGHTSSVLRASFLT 474
G+ S ++S + D + + +G K +++W S C+ T ++ AS T
Sbjct: 238 GVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCV-----FTQTLPDASSHT 292
Query: 475 RGAQIVSCGADGLVKLWTV-RTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
GL++L + RTG I +H ++ + F D L
Sbjct: 293 EDEDAEDEERLGLLQLLLLPRTGRLITVTAEHNILLYQTPTLAVQQQFVGYNDDVL 348
Score = 127 (49.8 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 50/224 (22%), Positives = 94/224 (41%)
Query: 292 ALSSGKILIVTGSKDNSVRLWD-SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
ALS ++V+ S+ +R WD + +C H V +++F L +G D
Sbjct: 70 ALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCT-STLLATGGCDG 128
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV--CTGSQDRTACVWR 408
TIK+W D + NLK + V ++ + P+ S + + S D +W
Sbjct: 129 TIKLW--DVIKQYCTH--NLKGSSGV------VHLVEFHPDISRLQLFSSSSDCAIRIWD 178
Query: 409 LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT---FEGHTS 465
L V H + ++ FSP ++++ DK +W + + +T +E
Sbjct: 179 LRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEG 238
Query: 466 SVL---RASFLTRGAQ-----IVSCGADGLVKLWTVRTGECIAT 501
VL A + G + +V+ G+ G++++W + C+ T
Sbjct: 239 VVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCVFT 282
Score = 79 (32.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 65/338 (19%), Positives = 126/338 (37%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
A+ +L++ F G+ V + F D + + ++ + ++V++L C
Sbjct: 322 AEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHIAVA-TNSSQLKVFELSTNSC- 379
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW--DLRDYSCKLTVPTYEMVEAVCAIP 125
L H + S+ + GS + +DK V +W D+ AV +I
Sbjct: 380 QILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIA 439
Query: 126 PGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMW----------NADSAC---- 171
F+ S +Q K E T G G++ M + +S C
Sbjct: 440 CSRMKQQFVVSGSQDCTVKVWDLPE----TTGAEGVMMMKARSTERAHEKDVNSVCVSPN 495
Query: 172 --LYEQKSSDVTIS-FEMDD---------SKRGFTAATVLPSNQGLLCVTADQQLLLYTT 219
L S D T + + D +RG + P +Q L +AD + +++
Sbjct: 496 DKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSI 555
Query: 220 VEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLA 279
+ K G++ +L + F+ Q ++ ++ V+++ + + C L
Sbjct: 556 -------QDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSD-GLVKLWTIKTNECVRTLD 607
Query: 280 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 317
H + V L L+VTGS D+++ +W + R
Sbjct: 608 AHQDKVWALHGGCRDE---LMVTGSADSTITVWTDKLR 642
Score = 74 (31.1 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 33 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK-HFSRVTSMAITSDGSTLIS 91
+++ PD + +L S S +R WD ++C + H V SM+ + L +
Sbjct: 66 ITAFALSPDDE--MLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLAT 123
Query: 92 AGRDKVVNLWDLRDYSC 108
G D + LWD+ C
Sbjct: 124 GGCDGTIKLWDVIKQYC 140
Score = 72 (30.4 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW-DLLAKK 65
G+D V +W + C H+ V ++ H L+ +GS D+T+ VW D L K
Sbjct: 587 GSDGLVKLWTIKTNECVRTLDAHQDKVWAL--HGGCRDELMVTGSADSTITVWTDKLRKT 644
Query: 66 CV 67
+
Sbjct: 645 VI 646
Score = 63 (27.2 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 11/55 (20%), Positives = 28/55 (50%)
Query: 56 VRVWDLLAKKCVATLDKHFSR-VTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 109
+ + + K + ++++ +T+ A++ D L+SA R ++ WD + C+
Sbjct: 44 INILQISTGKIIHSIEQEDQEDITAFALSPDDEMLVSASRALLLRQWDWKQQQCR 98
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 253/743 (34%), Positives = 421/743 (56%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
+D+ V VWD++ G+CTH F+ H VV+ + FHP K L + D +RV+DL+ K+CV
Sbjct: 149 SDKTVKVWDLEKGYCTHNFQ-HDDVVTMLKFHPTLLK--LVTVCLDLNIRVYDLVTKECV 205
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
L H S+++ + ++ G LIS+GRDKV+N+WD+ + K T+P Y+ + + +P
Sbjct: 206 I-LTNHLSQISGITFSNSGKELISSGRDKVLNVWDMLSKNPKKTIPIYQELGGIITLPKE 264
Query: 128 SAFDSFL--SSYNQQTIKKKRRSLEIHF----------ITVGERGIVRMWNADSA-CLYE 174
S ++S S + I++K +++ H I +G ++R W ++ C++
Sbjct: 265 S-YNSLPENSKIKIEKIREKVKTMAAHADKIKNGDDITIVIGGEEVLRAWCTETGECIWN 323
Query: 175 QKSSDVTISFEMDDSKRG---FTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELIL 231
++ + + DD + +T ++++ + ++ +T++ LL+Y + E++ E+I
Sbjct: 324 DQNIEFKKKTDNDDKDKTDTLYTISSIINNKDKIISITSEHNLLIYNGKTL-ERQGEII- 381
Query: 232 SKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC 291
GYN+EI+D+K++ ++ + VATN +++ YDL++ VL GH ++V+ +D
Sbjct: 382 -----GYNDEIIDIKYINDDN--IIVATNSNEIKTYDLNTKRAQ-VLRGHEDLVMSVDVS 433
Query: 292 ALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN--FLVSGSSD 349
A GK I++GS+D S +WD E + + TGH G + VA KK F ++ S D
Sbjct: 434 A--DGKH-IISGSRDKSAMIWDLEKKESIAQLTGHTGVISCVALPKKPSTSMFAITASDD 490
Query: 350 HTIKVW------SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRT 403
TIK+W S G D ++ + A AH KDINS+++APND + T SQD
Sbjct: 491 RTIKLWKGFSTTSSSGGDDSKKKDKKISASVTKIAHEKDINSISIAPNDKIFATASQDSY 550
Query: 404 ACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGH 463
+W + +L + + + H+RG+W VEFSP+DQ +T S D TIKIWS+SD +CLKT EGH
Sbjct: 551 VKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEGH 610
Query: 464 TSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 523
SVL+ASF++ G QIVS ++GL+KLW ++T EC+ T++ HE KIWAL+V K E F T
Sbjct: 611 KGSVLKASFISFGMQIVSVASEGLIKLWNIKTNECLNTFEGHESKIWALSVAKDQERFIT 670
Query: 524 GGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRPHKL 583
GGSD+ + W D T VL Q L+ A+ DY A+++A L +P +
Sbjct: 671 GGSDSKLIAWKDHTEIELEIQKKKEENQVLYKQHLDTAIRKKDYYSALKLALVLDQPRQT 730
Query: 584 FELFASVCRKREA--ELQIEKALHALGKEEIRQLLEYVREWNTKPKLCHVAQFVLFQLFN 641
+F S+ ++ E I+ + L E+ + L ++R+WNT K ++Q VL +
Sbjct: 731 LNIFNSMYYDDQSIGESVIQGCIGRLSPNEVVKCLRFIRDWNTNSKFVSISQIVLNSIIT 790
Query: 642 IHPPTEI--IEIKGISDVLEGLIPYTQRHFSRIDRLVRSTFLLDYTLTGMSVIEPDTEAR 699
P E+ + + + +LE +IPYT RHF RID++++ T+L+D+T+ ++
Sbjct: 791 SFKPDELSKLSVGEMPKLLESIIPYTDRHFQRIDKMLQKTYLIDFTIQSINPAASTLSMD 850
Query: 700 EVKAESLVDSNVHQDANDVVITE 722
V+ S +D N ++ + D +I E
Sbjct: 851 RVET-SHIDQN-YKKSLDQLIKE 871
Score = 250 (93.1 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 110/544 (20%), Positives = 234/544 (43%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
+KGH+G ++ I H + +++ S S D TV+VWDL C +H VT +
Sbjct: 125 WKGHEGPINEIDIH--SSGNIVASASSDKTVKVWDLEKGYCTHNF-QHDDVVTMLKFHPT 181
Query: 86 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG-----SAFDSFLSSYNQQ 140
L++ D + ++DL C + + + G S D L+ ++
Sbjct: 182 LLKLVTVCLDLNIRVYDLVTKECVILTNHLSQISGITFSNSGKELISSGRDKVLNVWDML 241
Query: 141 TIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLP 200
+ K ++++ I + +G GI+ + L E +S + I + K A +
Sbjct: 242 S-KNPKKTIPI-YQELG--GIITLPKESYNSLPE--NSKIKIEKIREKVKTMAAHADKIK 295
Query: 201 SNQGLLCVTADQQLLLYTTVEVPE---KKMELILSKRLVGYNEEILDLKF-----LGEEE 252
+ + V +++L E E + K+ +++ D + + ++
Sbjct: 296 NGDDITIVIGGEEVLRAWCTETGECIWNDQNIEFKKKTDNDDKDKTDTLYTISSIINNKD 355
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
+ +++ T+ + +Y+ ++ + G+++ ++ D ++ I++ T S N ++ +
Sbjct: 356 KIISI-TSEHNLLIYNGKTLERQGEIIGYNDEII--DIKYINDDNIIVATNS--NEIKTY 410
Query: 313 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 372
D ++ V GH V +V S ++ ++SGS D + +W D E+ ++
Sbjct: 411 DLNTKRAQ-VLRGHEDLVMSVDVSADGKH-IISGSRDKSAMIW-------DLEKKESI-- 459
Query: 373 KAVVAAHGKDINSLAVA--PNDSLVC-TGSQDRTACVWR--------------LPD--LV 413
A + H I+ +A+ P+ S+ T S DRT +W+ D +
Sbjct: 460 -AQLTGHTGVISCVALPKKPSTSMFAITASDDRTIKLWKGFSTTSSSGGDDSKKKDKKIS 518
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
+ VT H++ I S+ +P D++ TAS D +K+W++++ + + + H V F
Sbjct: 519 ASVTKIAHEKDINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFS 578
Query: 474 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
++C ADG +K+W++ C+ T + H+ + + + S+ L+ LW
Sbjct: 579 PIDQCFLTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKASFISFGMQIVSVASEGLIKLW 638
Query: 534 HDST 537
+ T
Sbjct: 639 NIKT 642
Score = 160 (61.4 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 36/151 (23%), Positives = 73/151 (48%)
Query: 383 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 442
I++ A++PN+ + G + +R+ D V ++GH+ I ++ +V +AS
Sbjct: 90 ISTFALSPNNEEILIGCSNLQIKQYRIEDQSLVKIWKGHEGPINEIDIHSSGNIVASASS 149
Query: 443 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 502
DKT+K+W + G C F+ H V F ++V+ D ++++ + T EC+
Sbjct: 150 DKTVKVWDLEKGYCTHNFQ-HDDVVTMLKFHPTLLKLVTVCLDLNIRVYDLVTKECVILT 208
Query: 503 DKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ H +I + + + G D ++N+W
Sbjct: 209 N-HLSQISGITFSNSGKELISSGRDKVLNVW 238
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 964 (344.4 bits), Expect = 5.2e-97, P = 5.2e-97
Identities = 244/702 (34%), Positives = 371/702 (52%)
Query: 20 GFCTHYFKG-HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVT 78
G T +K H V+++ F P + +LL +G D VRVWD++ V
Sbjct: 6 GSVTRLWKAIHTAPVATMAFDPTS--TLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVH 63
Query: 79 SMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTVPT--YEMVEAVCAIPPG-----SA 129
+A D + L+ S+ D + +W L+D SC L V T Y V ++ G S
Sbjct: 64 LVAFHPDPTRLLLFSSATDAAIRVWSLQDRSC-LAVLTAHYSAVTSLAFSADGHTMLSSG 122
Query: 130 FDSFLSSYNQQTIKKKR-----RSLEIHFITVGERGIVRMWNADSACLYEQKSSDV-TIS 183
D ++ Q+ + R S+E + + E + ++ S LY + D T+
Sbjct: 123 RDKICIIWDLQSCQATRTVPVFESVEAA-VLLPEEPVSQL-GVKSPGLYFLTAGDQGTLR 180
Query: 184 -FEMDDSKRGFTAATVLPSNQGLL-CVTADQQ-LLLYTTVE---VPEKKMELILSKRLVG 237
+E + +T A Q L C A ++L T + + + L L K+ G
Sbjct: 181 VWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEARSLRLQKQFAG 240
Query: 238 YNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGK 297
Y+EE+LD++FLG E+ ++ VA+N ++V++L + +C +L GH++IVL LD G
Sbjct: 241 YSEEVLDVRFLGPEDSHVVVASNSPCLKVFELQTSACQ-ILHGHTDIVLALDV--FRKGW 297
Query: 298 ILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 357
L + +KD SVR+W M G V ++FLV+GS D T+K+W
Sbjct: 298 -LFASCAKDQSVRIW-------------RMNKAGQVMLK---ESFLVTGSQDCTVKLWPL 340
Query: 358 DG--LSDDAEQ---PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
LS + P+ L+A+ H KDINS+A+APND L+ TGSQDRTA +W LP
Sbjct: 341 PKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQC 400
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 472
+ F GH+RG+W V+FSP+DQV+ TAS D TIK+W++ D SCLKTFEGH +SVL+ +F
Sbjct: 401 QLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAF 460
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 532
++RG Q++S G+DGLVKLWT++ EC+ T D HEDK+W L + + TG SD+ V L
Sbjct: 461 VSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDHALTGASDSRVIL 520
Query: 533 WHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCR 592
W D T V+R QEL+N + + Y +A+ +A L RPH + + ++ R
Sbjct: 521 WKDVTEAEQAEEQARQEEQVVRQQELDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRR 580
Query: 593 KREAELQIEKALHALGKEEIRQLLEYVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIK 652
EA ++E + L +++ LL + WNT + CH AQ VL L P E++ +
Sbjct: 581 DPEACEKLEATMLRLRRDQKEALLRFCVTWNTNSRHCHEAQAVLGVLLRREAPEELLAYE 640
Query: 653 GISDVLEGLIPYTQRHFSRIDRLVRSTFLLDYTLTGMSVIEP 694
G+ LE L+PYT+RHF R+ R +++ LD+ M + P
Sbjct: 641 GVRAALEALLPYTERHFQRLSRTLQAAAFLDFLWHNMKLPVP 682
Score = 340 (124.7 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 69/170 (40%), Positives = 101/170 (59%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWD+ + TH+F+G GVV + FHPD + LLFS + DA +RVW L + C
Sbjct: 36 GCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSC 95
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 126
+A L H+S VTS+A ++DG T++S+GRDK+ +WDL+ TVP +E VEA +P
Sbjct: 96 LAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPE 155
Query: 127 GSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQ 175
+Q +K S ++F+T G++G +R+W A S C+Y Q
Sbjct: 156 --------EPVSQLGVK----SPGLYFLTAGDQGTLRVWEAASGQCVYTQ 193
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 71/387 (18%), Positives = 159/387 (41%)
Query: 1 MFALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS--LLFSGSDDATVRV 58
++ L G + VW+ G C Y + L H + ++ + + D + +
Sbjct: 168 LYFLTAGDQGTLRVWEAASGQCV-YTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLL 226
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITS-DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM 117
++ + + + V + + S ++ A + +++L+ +C++ ++
Sbjct: 227 YEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFELQTSACQILHGHTDI 286
Query: 118 VEAVCAIPPGSAFDSFLSSYNQQTIKKKRRS---LEIHFITVGERGI-VRMWNADSACLY 173
V A+ G F S + + + + L+ F+ G + V++W A L
Sbjct: 287 VLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMLKESFLVTGSQDCTVKLWPLPKALLS 346
Query: 174 EQKSSDV-TISFEMDDSKR----GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKME 228
+ + D I + ++R + + P+++ L + D+ L+ +P+ ++
Sbjct: 347 KNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWA---LPQCQLL 403
Query: 229 LILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL 288
+ S G+ + ++F +Q LA A+ ++++ L SC GH VL
Sbjct: 404 GVFS----GHRRGLWCVQF-SPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVL-- 456
Query: 289 DTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSS 348
+S G L+ +GS D V+LW ++ CV H V + S+ L + ++G+S
Sbjct: 457 KVAFVSRGTQLLSSGS-DGLVKLWTIKNNECVRTLDAHEDKVWGLHCSR-LDDHALTGAS 514
Query: 349 DHTIKVWSFDGLSDDAEQPMNLKAKAV 375
D + +W ++ AE+ + + V
Sbjct: 515 DSRVILWKDVTEAEQAEEQARQEEQVV 541
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 748 (268.4 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 176/563 (31%), Positives = 286/563 (50%)
Query: 152 HFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTAD 211
+F T G ++++W+ S + + + + E+ + N L V +D
Sbjct: 247 YFYTGGSENVLKIWDIKSGEMIGRSPIPLKTNEEL------LIIDVIKLYNNNLYLVISD 300
Query: 212 QQLLLYTTVEV-P---------EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNI 261
Q L+ E+ P ++ +E + KR+ G I D+K++G E LA+ATN
Sbjct: 301 QTLIELDLQELTPGHGHGHGQDDEIVEFPIVKRIAGNQGIIADIKYVGPEFNLLAMATNS 360
Query: 262 EQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCC 319
+++ D+ V GH++I+ +D + GK I T SKDN RLW + E +
Sbjct: 361 PALRIVDIEKPLELRVYEGHTDILNAVDVS--TDGK-WIATASKDNEARLWRWNGELQDF 417
Query: 320 VGVGT--GHMGAVGAVAFSKKLQN---FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 374
GH GA+ A++ SK QN FLV+GS+D TIK W + + +A
Sbjct: 418 EPFARFQGHAGAITAISLSKS-QNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRA 476
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 434
H KDINS+ V+PND T S D+ VW+ ++ +GHKRG+W + F D
Sbjct: 477 ----HDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFD 532
Query: 435 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG-AQIVSCGADGLVKLWTV 493
++++T SGDKTIK+WS+ D SC KT EGHT+SV R F R Q++SCGADGL+KLW
Sbjct: 533 KLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDY 592
Query: 494 RTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVL 553
+ GE I + D H+ +IWA+ + E F T +D ++ W D+T +
Sbjct: 593 KQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEEEVKFKELQAKEKIE 652
Query: 554 RGQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCRKRE------AELQIEKALHAL 607
+ Q L N + + D++ A +A L +L+ + S E +E + L
Sbjct: 653 QEQSLSNYIKNKDWSNAFLLALTLDHSMRLYNVIKSSIETNEDKDSIIGSFSLENTISLL 712
Query: 608 GKEEIRQLLEYVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEGLIPYTQR 667
++ +L + +R+WN K ++Q +L + N ++ E+ G+ ++E +IPY +R
Sbjct: 713 DDGQLVKLFKKIRDWNVNFKFFEISQKLLNVVLNNFAVDKLTEVPGLMKIMESIIPYNER 772
Query: 668 HFSRIDRLVRSTFLLDYTLTGMS 690
H++RI+ +V T++LDYT+ M+
Sbjct: 773 HYNRIEEMVEQTYVLDYTVEQMN 795
Score = 221 (82.9 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 43/122 (35%), Positives = 68/122 (55%)
Query: 1 MFALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS--LLFSGSDDATVRV 58
+FA G+D + VWD++ G+ TH KGH + S+ FH + + L SG TV++
Sbjct: 115 LFAF-GGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKI 173
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WDL+ ++C+ TL H + V + DG IS GRD VV +++ +++ T P E +
Sbjct: 174 WDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQI 233
Query: 119 EA 120
EA
Sbjct: 234 EA 235
Score = 199 (75.1 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 114/536 (21%), Positives = 208/536 (38%)
Query: 14 VWDVDGGFCTHYFKGHKGV-VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK 72
++D++ G FK V +SS+ D+ SL G D + VWD+ +L
Sbjct: 86 IFDLNKGSVIKNFKLPSPVYISSV----DSTSSLFAFGGSDGVITVWDIENGYVTHSLKG 141
Query: 73 HFSRVTSMA----ITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
H + + S+ + S L S V +WDL C T+ + AV +
Sbjct: 142 HGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNT--AVRGVGFDQ 199
Query: 129 AFDSFLSSY--NQQTIKKKRRSLEIHFITVGER----GIVRMWNADSACLYEQKSSDVTI 182
D F+S N I + I+ + E+ G V + + D Y S +V
Sbjct: 200 DGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLID-DRQYFYTGGSENV-- 256
Query: 183 SFEMDDSKRG-FTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE 241
++ D K G + +P + +++LL+ +++ + L++S ++
Sbjct: 257 -LKIWDIKSGEMIGRSPIP-------LKTNEELLIIDVIKLYNNNLYLVIS------DQT 302
Query: 242 ILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIV 301
+++L Q L Q ++ +AG+ I+ + + +
Sbjct: 303 LIELDL-----QELTPGHGHGHGQDDEIVEFPIVKRIAGNQGIIADIKYVGPEFNLLAMA 357
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
T S ++R+ D E + V GH + AV S ++ + S D+ ++W ++G
Sbjct: 358 TNSP--ALRIVDIEKPLELRVYEGHTDILNAVDVSTD-GKWIATASKDNEARLWRWNGEL 414
Query: 362 DDAEQPMNLK--AKAVVAAH-GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D E + A A+ A K N S T + + S T
Sbjct: 415 QDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTR 474
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
R H + I S++ SP D+ TAS DK K+W G + +GH + +F
Sbjct: 475 RAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKL 534
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLW 533
IV+ D +K+W++ C T + H + + + ++ + G+D L+ LW
Sbjct: 535 IVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLW 590
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ VW D G KGHK + I F+ DK L+ +GS D T++VW LL C
Sbjct: 499 DKLGKVWQTDSGETIGVLKGHKRGLWDINFYK-FDK-LIVTGSGDKTIKVWSLLDFSCKK 556
Query: 69 TLDKHFSRVTSMAITS-DGSTLISAGRDKVVNLWDLR 104
TL+ H + V + + + L+S G D ++ LWD +
Sbjct: 557 TLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYK 593
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 58/272 (21%), Positives = 116/272 (42%)
Query: 192 GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEE 251
G T+A++ SN LL T + ++ T ++ E I+ K + G E I +L + +
Sbjct: 19 GGTSASISTSNGELLLATPLNEDVIITNLDTNE-----IIYK-IPGDGEVITNLT-ITPD 71
Query: 252 EQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 311
YLA+ + + ++++DL+ S S + + ++ S L G D + +
Sbjct: 72 GSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYIS----SVDSTSSLFAFGGSDGVITV 127
Query: 312 WDSESRCCVGVGTGHMGAVGAVAFSKKL--QNF-LVSGSSDHTIKVWSFDGLSDDAEQPM 368
WD E+ GH + ++ F +L Q++ L SG + T+K+W +
Sbjct: 128 WDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDL----------V 177
Query: 369 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 428
+ + H + + + L +G +D ++ + ++ TF +++ I +
Sbjct: 178 KRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQ-IEAA 236
Query: 429 EF-SPVD--QVVITASGDKTIKIWSISDGSCL 457
F S +D Q T + +KIW I G +
Sbjct: 237 GFVSLIDDRQYFYTGGSENVLKIWDIKSGEMI 268
Score = 55 (24.4 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 77 VTSMAITSDGSTLISAGRDKVVNLWDLRDYSC----KLTVPTY 115
+T++ IT DGS L + +++ ++DL S KL P Y
Sbjct: 63 ITNLTITPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVY 105
Score = 44 (20.5 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 8/55 (14%), Positives = 26/55 (47%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
G D V++++ + F ++ + ++ D+ ++G + +++WD+
Sbjct: 208 GRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDI 262
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 748 (268.4 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 176/563 (31%), Positives = 286/563 (50%)
Query: 152 HFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTAD 211
+F T G ++++W+ S + + + + E+ + N L V +D
Sbjct: 247 YFYTGGSENVLKIWDIKSGEMIGRSPIPLKTNEEL------LIIDVIKLYNNNLYLVISD 300
Query: 212 QQLLLYTTVEV-P---------EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNI 261
Q L+ E+ P ++ +E + KR+ G I D+K++G E LA+ATN
Sbjct: 301 QTLIELDLQELTPGHGHGHGQDDEIVEFPIVKRIAGNQGIIADIKYVGPEFNLLAMATNS 360
Query: 262 EQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCC 319
+++ D+ V GH++I+ +D + GK I T SKDN RLW + E +
Sbjct: 361 PALRIVDIEKPLELRVYEGHTDILNAVDVS--TDGK-WIATASKDNEARLWRWNGELQDF 417
Query: 320 VGVGT--GHMGAVGAVAFSKKLQN---FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 374
GH GA+ A++ SK QN FLV+GS+D TIK W + + +A
Sbjct: 418 EPFARFQGHAGAITAISLSKS-QNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRA 476
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 434
H KDINS+ V+PND T S D+ VW+ ++ +GHKRG+W + F D
Sbjct: 477 ----HDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFD 532
Query: 435 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG-AQIVSCGADGLVKLWTV 493
++++T SGDKTIK+WS+ D SC KT EGHT+SV R F R Q++SCGADGL+KLW
Sbjct: 533 KLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDY 592
Query: 494 RTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVL 553
+ GE I + D H+ +IWA+ + E F T +D ++ W D+T +
Sbjct: 593 KQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEEEVKFKELQAKEKIE 652
Query: 554 RGQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCRKRE------AELQIEKALHAL 607
+ Q L N + + D++ A +A L +L+ + S E +E + L
Sbjct: 653 QEQSLSNYIKNKDWSNAFLLALTLDHSMRLYNVIKSSIETNEDKDSIIGSFSLENTISLL 712
Query: 608 GKEEIRQLLEYVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEGLIPYTQR 667
++ +L + +R+WN K ++Q +L + N ++ E+ G+ ++E +IPY +R
Sbjct: 713 DDGQLVKLFKKIRDWNVNFKFFEISQKLLNVVLNNFAVDKLTEVPGLMKIMESIIPYNER 772
Query: 668 HFSRIDRLVRSTFLLDYTLTGMS 690
H++RI+ +V T++LDYT+ M+
Sbjct: 773 HYNRIEEMVEQTYVLDYTVEQMN 795
Score = 221 (82.9 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 43/122 (35%), Positives = 68/122 (55%)
Query: 1 MFALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS--LLFSGSDDATVRV 58
+FA G+D + VWD++ G+ TH KGH + S+ FH + + L SG TV++
Sbjct: 115 LFAF-GGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKI 173
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WDL+ ++C+ TL H + V + DG IS GRD VV +++ +++ T P E +
Sbjct: 174 WDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQI 233
Query: 119 EA 120
EA
Sbjct: 234 EA 235
Score = 199 (75.1 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 114/536 (21%), Positives = 208/536 (38%)
Query: 14 VWDVDGGFCTHYFKGHKGV-VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK 72
++D++ G FK V +SS+ D+ SL G D + VWD+ +L
Sbjct: 86 IFDLNKGSVIKNFKLPSPVYISSV----DSTSSLFAFGGSDGVITVWDIENGYVTHSLKG 141
Query: 73 HFSRVTSMA----ITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
H + + S+ + S L S V +WDL C T+ + AV +
Sbjct: 142 HGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNT--AVRGVGFDQ 199
Query: 129 AFDSFLSSY--NQQTIKKKRRSLEIHFITVGER----GIVRMWNADSACLYEQKSSDVTI 182
D F+S N I + I+ + E+ G V + + D Y S +V
Sbjct: 200 DGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLID-DRQYFYTGGSENV-- 256
Query: 183 SFEMDDSKRG-FTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE 241
++ D K G + +P + +++LL+ +++ + L++S ++
Sbjct: 257 -LKIWDIKSGEMIGRSPIP-------LKTNEELLIIDVIKLYNNNLYLVIS------DQT 302
Query: 242 ILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIV 301
+++L Q L Q ++ +AG+ I+ + + +
Sbjct: 303 LIELDL-----QELTPGHGHGHGQDDEIVEFPIVKRIAGNQGIIADIKYVGPEFNLLAMA 357
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
T S ++R+ D E + V GH + AV S ++ + S D+ ++W ++G
Sbjct: 358 TNSP--ALRIVDIEKPLELRVYEGHTDILNAVDVSTD-GKWIATASKDNEARLWRWNGEL 414
Query: 362 DDAEQPMNLK--AKAVVAAH-GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D E + A A+ A K N S T + + S T
Sbjct: 415 QDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTR 474
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
R H + I S++ SP D+ TAS DK K+W G + +GH + +F
Sbjct: 475 RAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKL 534
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLW 533
IV+ D +K+W++ C T + H + + + ++ + G+D L+ LW
Sbjct: 535 IVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLW 590
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ VW D G KGHK + I F+ DK L+ +GS D T++VW LL C
Sbjct: 499 DKLGKVWQTDSGETIGVLKGHKRGLWDINFYK-FDK-LIVTGSGDKTIKVWSLLDFSCKK 556
Query: 69 TLDKHFSRVTSMAITS-DGSTLISAGRDKVVNLWDLR 104
TL+ H + V + + + L+S G D ++ LWD +
Sbjct: 557 TLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYK 593
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 58/272 (21%), Positives = 116/272 (42%)
Query: 192 GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEE 251
G T+A++ SN LL T + ++ T ++ E I+ K + G E I +L + +
Sbjct: 19 GGTSASISTSNGELLLATPLNEDVIITNLDTNE-----IIYK-IPGDGEVITNLT-ITPD 71
Query: 252 EQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 311
YLA+ + + ++++DL+ S S + + ++ S L G D + +
Sbjct: 72 GSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYIS----SVDSTSSLFAFGGSDGVITV 127
Query: 312 WDSESRCCVGVGTGHMGAVGAVAFSKKL--QNF-LVSGSSDHTIKVWSFDGLSDDAEQPM 368
WD E+ GH + ++ F +L Q++ L SG + T+K+W +
Sbjct: 128 WDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDL----------V 177
Query: 369 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 428
+ + H + + + L +G +D ++ + ++ TF +++ I +
Sbjct: 178 KRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQ-IEAA 236
Query: 429 EF-SPVD--QVVITASGDKTIKIWSISDGSCL 457
F S +D Q T + +KIW I G +
Sbjct: 237 GFVSLIDDRQYFYTGGSENVLKIWDIKSGEMI 268
Score = 55 (24.4 bits), Expect = 5.9e-78, Sum P(2) = 5.9e-78
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 77 VTSMAITSDGSTLISAGRDKVVNLWDLRDYSC----KLTVPTY 115
+T++ IT DGS L + +++ ++DL S KL P Y
Sbjct: 63 ITNLTITPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVY 105
Score = 44 (20.5 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 8/55 (14%), Positives = 26/55 (47%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
G D V++++ + F ++ + ++ D+ ++G + +++WD+
Sbjct: 208 GRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDI 262
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
Identities = 236/726 (32%), Positives = 370/726 (50%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS--LLFSGSDDATVRVWDLLAK 64
G D ++V D++ G+ TH FKGH G +SS+ F+ + LL SG + V+VWDL+ +
Sbjct: 121 GTDGSIIVVDIENGYITHSFKGHGGTISSLKFYGQLNSKIWLLASGDTNGMVKVWDLVKR 180
Query: 65 KCVATLDKHFSRVTSMAITS--DGS----TLISAGRDKVVNLWDLR-DYSCKL--TVPTY 115
KC+ TL +H S V + I D L+S GRD ++NLWD CKL T+P
Sbjct: 181 KCLHTLQEHTSAVRGLDIIEVPDNDEPSLNLLSGGRDDIINLWDFNMKKKCKLLKTLPVN 240
Query: 116 EMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQ 175
+ VE+ C FL + + I T G I ++ +++S + ++
Sbjct: 241 QQVES-CG---------FLKDGDGKRI----------IYTAGGDAIFQLIDSESGSVLKR 280
Query: 176 KSSDVTISFEMDDSKRGFTAATVLP--SNQGLLCVTADQQLLLYTTVEVPEKKMELI-LS 232
+ + F + VLP SN + V +DQ L L E + + I ++
Sbjct: 281 TNKPIEELFIIG----------VLPILSNSQMFLVLSDQTLQLINVEEDLKNDEDTIQVT 330
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATN---IEQVQVYDLSSMSCSYVL-----AGHSEI 284
+ G + I D++++G E LA+ATN + + V DLS S L GH ++
Sbjct: 331 SSIAGNHGIIADMRYVGPELNKLALATNSPSLRIIPVPDLSGPEASLPLDVEIYEGHEDL 390
Query: 285 VLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRCCVGVGT---GHMGAVGAVAF----S 336
+ LD A G + I T SKDN+ +W +E+ C + GH AV AV S
Sbjct: 391 LNSLD--ATEDG-LWIATASKDNTAIVWRYNENSCKFDIYAKYIGHSAAVTAVGLPNIVS 447
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
K FL++ S+D TIK W + + + ++ AH KDIN+L+V+PNDS+
Sbjct: 448 KGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVSEYTRHAHEKDINALSVSPNDSIFA 507
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
T S D+T +W L + T HKRG+W V F D+++ T+SGDKT+KIWS+ S
Sbjct: 508 TASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSGDKTVKIWSLDTFSV 567
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 516
+KT EGHT++V R SF+ + Q++SCGADGL+K+W +GEC+ T D H +++WAL+
Sbjct: 568 MKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCSSGECLKTLDGHNNRLWALSTMN 627
Query: 517 KTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAIQVAFE 576
+M + +D + W D T V + Q L+N + D+T A +A
Sbjct: 628 DGDMIVSADADGVFQFWKDCTEQEIEEEQEKAKLQVEQEQSLQNYMSKGDWTNAFLLAMT 687
Query: 577 LRRPHKLFELFASVC---RKR----EAELQI------EKALHALGKEEIRQLLEYVREWN 623
L P +LF + R R E ++++ ++A+ L E++ L++ R+WN
Sbjct: 688 LDHPMRLFNVLKRALGESRSRQDTEEGKIEVIFNEELDQAISILNDEQLILLMKRCRDWN 747
Query: 624 TKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEGLIPYTQRHFSRIDRLVRSTFLLD 683
T K +AQ + + H ++ EI G+ +++ +IPYTQRHF+R+D LV +++LD
Sbjct: 748 TNAKTHTIAQRTIRCILMHHNIAKLSEIPGMVKIVDAIIPYTQRHFTRVDNLVEQSYILD 807
Query: 684 YTLTGM 689
Y L M
Sbjct: 808 YALVEM 813
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 215/712 (30%), Positives = 359/712 (50%)
Query: 10 RKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVAT 69
R + ++++ G K H+ V ++ P +LL +G + V+VWD+ +
Sbjct: 83 RLLTIYEIPSGRRIKSMKAHETPVITMTIDPTN--TLLATGGAEGLVKVWDIAGAYVTHS 140
Query: 70 LDKHFSRVTSMAITSDGST--LISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
H ++++ +T L S D V LWDL + V P
Sbjct: 141 FRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPT 200
Query: 128 SAFDSFLSSYNQQTIK----KKR---RSLEIHFITVGERGIVRMWNADSACLYEQKSSDV 180
+F LS +T++ KKR R++ + F +V G V + LY ++
Sbjct: 201 GSF--LLSGSRDKTVQVWNIKKRSAVRTIPV-FHSVEAIGWVN-GQPEEKILYTAGEGNL 256
Query: 181 TISFE------MD---DSKRGFTAAT--VLP-SNQGLLCVTADQQLLLYTTVEVPEKKME 228
++++ +D D+ T A V+P S LL V +D LLL VP +
Sbjct: 257 ILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFSENTLLSVHSDLSLLLRK--RVPGEGF- 313
Query: 229 LILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL 288
I K+L G +E++D ++G++ +LAV +N E + V VL GH++IVL L
Sbjct: 314 -ITIKKLNGSFDEVIDCAWIGDD--HLAVCSNTEFIDVISTDGTQVFGVLEGHTDIVLTL 370
Query: 289 DTCALSSGKILIVTGSKDNSVRLWDS--ESRC--CVGVGTGHMGAVGAVAFSKKLQN--- 341
D+ S + + TG+KDN+VRLW+ E C+ V TGH +V AVA N
Sbjct: 371 DS---SEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYP 427
Query: 342 -FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 400
FL S S D T+K ++ + ++ + +A + AH +D+N++ V+ + ++ + SQ
Sbjct: 428 TFLASSSQDRTLKRFNLGSQLNKSD--FSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQ 485
Query: 401 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 460
D+T +W V RGH+RG+W+ F+P + + + SGD+TI+IW++ C++T
Sbjct: 486 DKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTL 545
Query: 461 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 520
EGHT ++L+ ++++G Q+VS ADGLVK+W++ +GEC+AT D HED++WALA +
Sbjct: 546 EGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSL 605
Query: 521 FATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRP 580
+GG+DA+V++W D T V Q L N D+ +AI +A L RP
Sbjct: 606 LVSGGADAVVSVWKDVTEEYIAKQAEELERRVEAEQLLSNFEQTEDWQQAIALALSLDRP 665
Query: 581 HKLFELFASVCRKRE------AELQIEKALHALGKEEIRQLLEYVREWNTKPKLCHVAQF 634
H L LF V ++ L L ++ L + +R+WNT K VAQ
Sbjct: 666 HGLLRLFERVMTAPHQPNSITGNKDVDNVLVQLPDHQLIILFQRIRDWNTNSKTSMVAQR 725
Query: 635 VLFQLFNIHPPTEIIEIKGISDVLEGLIPYTQRHFSRIDRLVRSTFLLDYTL 686
+L L + + P ++++ GI D+L+ +IPYT RH +R++ L+ ++++DY +
Sbjct: 726 LLRLLLHSYSPEHLLKLSGIKDILDSMIPYTDRHLARVNDLIEDSYIVDYVI 777
Score = 242 (90.2 bits), Expect = 9.1e-17, P = 9.1e-17
Identities = 44/115 (38%), Positives = 70/115 (60%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
GA+ V VWD+ G + TH F+GH GV+S++ F + +L SG+DD+ VR+WDL + +
Sbjct: 122 GAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRS 181
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV 121
+A + H S + + GS L+S RDK V +W+++ S T+P + VEA+
Sbjct: 182 MAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAI 236
Score = 188 (71.2 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 43/120 (35%), Positives = 66/120 (55%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ DR + +W+VD C +GH G + +++ + + + S + D V+VW L
Sbjct: 522 LASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYI--SQGTQVVSAAADGLVKVWSLS 579
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW-DL-RDYSCKLTVPTYEMVEA 120
+ +CVATLD H RV ++A DGS L+S G D VV++W D+ +Y K VEA
Sbjct: 580 SGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEELERRVEA 639
Score = 176 (67.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 57/239 (23%), Positives = 108/239 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + +WD G +GH+ V + F+P + + L SGS D T+R+W++ ++CV
Sbjct: 486 DKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQ--LASGSGDRTIRIWNVDTQQCVQ 543
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL+ H + + S G+ ++SA D +V +W L C T+ +E + V A+ S
Sbjct: 544 TLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHE--DRVWAL--AS 599
Query: 129 AFD-SFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSD----VTIS 183
FD S L S + + + +I + R A+ +++ D + ++
Sbjct: 600 RFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEELERRVEAEQLLSNFEQTEDWQQAIALA 659
Query: 184 FEMDDSK---RGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYN 239
+D R F P + D +L V++P+ ++ +IL +R+ +N
Sbjct: 660 LSLDRPHGLLRLFERVMTAPHQPNSITGNKDVDNVL---VQLPDHQL-IILFQRIRDWN 714
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/154 (18%), Positives = 66/154 (42%)
Query: 383 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 442
+ +LA+ + + + R ++ +P + + + H+ + ++ P + ++ T
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGA 123
Query: 443 DKTIKIWSISDGSCLKTFEGHTSSVLRASF-LTRGAQIVSCGAD-GLVKLWTVRTGECIA 500
+ +K+W I+ +F GH + F + +++ GAD V+LW + + +A
Sbjct: 124 EGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMA 183
Query: 501 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 534
++ H I L +G D V +W+
Sbjct: 184 VFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWN 217
Score = 121 (47.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 40/160 (25%), Positives = 67/160 (41%)
Query: 437 VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 496
+I A + + I+ I G +K+ + H + V+ + + + GA+GLVK+W +
Sbjct: 76 LIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGA 135
Query: 497 ECIATYDKHEDKIWALAVGK--KTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLR 554
++ H I AL GK T + A+G D+ V LW V+R
Sbjct: 136 YVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLW--DLNSSRSMAVFEGHSSVIR 193
Query: 555 GQELE---NAVLDADYTKAIQV-AFELRRPHKLFELFASV 590
G E + +L K +QV + R + +F SV
Sbjct: 194 GLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSV 233
Score = 63 (27.2 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 14/63 (22%), Positives = 33/63 (52%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
D+++ +L + D + ++ + VT++AITSD LI+A R +++ +
Sbjct: 28 DSNEKILVTALTDRIIGTRSETGERLFSIKKDEDDYVTALAITSDSKKLIAAFRSRLLTI 87
Query: 101 WDL 103
+++
Sbjct: 88 YEI 90
>FB|FBgn0033454 [details] [associations]
symbol:CG1671 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 HSSP:P16649 GO:GO:0032040 KO:K14555
GeneTree:ENSGT00690000102183 OMA:ADSKLIR EMBL:BT004480
RefSeq:NP_610526.1 UniGene:Dm.18811 SMR:Q7JQT9 IntAct:Q7JQT9
STRING:Q7JQT9 EnsemblMetazoa:FBtr0088373 GeneID:36019
KEGG:dme:Dmel_CG1671 UCSC:CG1671-RA FlyBase:FBgn0033454
HOGENOM:HOG000244907 InParanoid:Q7JQT9 OrthoDB:EOG4KPRRV
GenomeRNAi:36019 NextBio:796373 Uniprot:Q7JQT9
Length = 787
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 216/711 (30%), Positives = 351/711 (49%)
Query: 14 VWDVDGGFCTHYFKG-HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK 72
+W +D G +K HKG V + F P + + SG DAT+R+WD C+ L K
Sbjct: 102 LWQLDTGKLVKLWKAQHKGPVIRVEFSP-CGRLICTSGGADATLRLWDYSNNSCLGAL-K 159
Query: 73 HFSRVTSMAITSDG---STLISAGRDKVVNLWD---------LRDYSCKLTVPTYEMVEA 120
F + + + + G D V W+ +R + ++T +++ +
Sbjct: 160 DFPGPAWLLVFHPNVLRKEIYAGGSDNTVYAWNYETKTLVHKMRGHLSQVTGLSFKSNAS 219
Query: 121 VCAIPPGSAFDSFLSSYN-QQTIKKKRRSL-----EIHFITVGERGIVRMWNADSACLYE 174
C + D + + Q+ ++ K+ + E+ + + G + + + S L +
Sbjct: 220 DCNEIVTVSRDKVMIVWQLQEQLESKQLKVLPLYDELEGVVYADEGQLIIVASGSGKLQQ 279
Query: 175 QKSSDVTISFEMDD--SKRGFTAATVLPSNQ--GLLCVTADQQLLLYTTVEVPEKKMELI 230
S+++ D S+ F + +L ++ L VT +Q +L+Y VE +E I
Sbjct: 280 VDPK----SWKIRDILSQSDFQISRLLHCSELKQLALVTTEQNILVYD-VET----LEPI 330
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS-SMSCSYVLAGHSEIVLCLD 289
K LVGYN+EILD+ F+GE ++YLAVATN + ++YD M+C ++ GHS+ V+ L
Sbjct: 331 --KHLVGYNDEILDMCFMGEHDRYLAVATNSKHFKLYDTEHDMNCKLIV-GHSDTVMSL- 386
Query: 290 TCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVGTG----HMGAVGAVAFSKKLQNFL 343
+S +LI G KD SVRLW + C + T H +G VA +
Sbjct: 387 ---AASQNLLISVG-KDCSVRLWRLQHDKDCSLEALTQQANCHTSTIGCVAMTHNGATGF 442
Query: 344 VSGSSDHTIKVWSFDGLSDDAEQ-PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
S S D ++KVW +D NL+ A+ +H K++N +A APN+ L+ T SQD+
Sbjct: 443 ASVSQDGSMKVWQLVRSKEDRNSYSFNLRYAAL--SHDKEVNCVAYAPNNKLIATASQDK 500
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
TA VW RGH RG+WSV FSPVDQ+V+T+S D T++IWSIS+ SC+K F+
Sbjct: 501 TAKVWLAESNTLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSISNFSCIKRFD- 559
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE-MF 521
++LRA FL G I+S +DGL+KLW ++T C+ + D+H D++WALAV ++ F
Sbjct: 560 QECTILRAEFLDHGKFIISAASDGLLKLWNIKTNTCLQSLDEHNDRVWALAVSARSNRFF 619
Query: 522 ATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAV-LDADYTKAIQVAFELRRP 580
TGG+D+ + + D T + + Q L + + KA +A L +P
Sbjct: 620 YTGGADSKLIRFGDVTQVTRNEALDKRQAALEQEQTLHSLLHAQKQLHKAFVLALNLDKP 679
Query: 581 HKLFELFASVCRKREAELQIEKALHALGKEEIRQLLEYVREWNTKPKLCHVAQFVLFQLF 640
F++ RKR+ E + + + L ++ LL++V+ W T + +L L
Sbjct: 680 KASFDIINHFVRKRD-EPGLRQLVDQLNVDQRVALLQHVKAWTTNSRHSQAGNMILKYLI 738
Query: 641 N--IHPPTEIIEIKGISDVLEGLIPYTQRHFSRIDRLVRSTFLLDYTLTGM 689
+ P G +++E L PY QRHF R+ L + L++ + M
Sbjct: 739 GDALLDPKARFYYNG--NMVEVLTPYVQRHFKRVTELNKDLAFLEFIVKCM 787
Score = 159 (61.0 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
GAD + +WD C K G ++FHP+ + +++G D TV W+ K
Sbjct: 139 GADATLRLWDYSNNSCLGALKDFPGPAWLLVFHPNVLRKEIYAGGSDNTVYAWNYETKTL 198
Query: 67 VATLDKHFSRVTSMAITSDGST---LISAGRDKVVNLWDLRDY--SCKLTV-PTYEMVEA 120
V + H S+VT ++ S+ S +++ RDKV+ +W L++ S +L V P Y+ +E
Sbjct: 199 VHKMRGHLSQVTGLSFKSNASDCNEIVTVSRDKVMIVWQLQEQLESKQLKVLPLYDELEG 258
Query: 121 V 121
V
Sbjct: 259 V 259
>WB|WBGene00013143 [details] [associations]
symbol:Y53C12B.1 species:6239 "Caenorhabditis elegans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007126 "meiosis"
evidence=IMP] [GO:0045132 "meiotic chromosome segregation"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045132 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:Z99278 KO:K14555 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 PIR:T27133 RefSeq:NP_496100.1
UniGene:Cel.13957 ProteinModelPortal:O18215 SMR:O18215
STRING:O18215 PaxDb:O18215 EnsemblMetazoa:Y53C12B.1 GeneID:190203
KEGG:cel:CELE_Y53C12B.1 UCSC:Y53C12B.1 CTD:190203
WormBase:Y53C12B.1 HOGENOM:HOG000016188 InParanoid:O18215
NextBio:944956 Uniprot:O18215
Length = 793
Score = 589 (212.4 bits), Expect = 7.7e-68, Sum P(2) = 7.7e-68
Identities = 158/557 (28%), Positives = 277/557 (49%)
Query: 152 HFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTAD 211
+ TVGE G+V+ + ++A L +K S +D A V+ SN+ L ++A+
Sbjct: 248 NLFTVGEEGVVKEFVIETAKLVRKKR---IASSNLDH-----LAYDVV-SNR-FLAISAE 297
Query: 212 QQLLL--YTTVEVPEKKM---ELILSKRLVGYNEEILDLKF-LGEEEQYLAVATNIEQVQ 265
Q L++ + +++ + + + I S L+G +E + + E Y + + ++
Sbjct: 298 QNLIILDFENLKIARQIVGFHDEIYSCCLLGKDESHMAVASNTSEIRLYNTKTLDCQLIR 357
Query: 266 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKIL--IVTGSKDNSVRLWDSESRCCVGVG 323
+ S +S V++ + L L +C+ + I +VT +++S + V
Sbjct: 358 GHTESVLS---VVSPTWDTSL-LASCSKDNSIIFWRLVTSPENDSC-----STLVPVAAA 408
Query: 324 TGHMGAVGAVAFSKKLQN-FLVSGSSDHTIKVWSF-----------DGLSDDAEQPMNLK 371
TGH V A+A S + FL S S+D TIK+W D D EQ L
Sbjct: 409 TGHANTVTALAISNTGRAPFLASVSTDCTIKLWGLGVSTKLKEVKIDAEKDFVEQLPKLT 468
Query: 372 AKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP----DLVSVVTFRGHKRGIWS 427
+ + AHGKD+N + ++ +D+L+ TG D+ +W++ L T GH+RG+
Sbjct: 469 CSSTMVAHGKDVNCVDISESDALIATGGMDKLVKLWQVDTHKMQLGIAGTLSGHRRGVGD 528
Query: 428 VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGL 487
V+F+ + + SGD TIKIW+IS+ SCL+T GH+ +V R F +Q++S + G+
Sbjct: 529 VKFAKNSHKLASCSGDMTIKIWNISEKSCLQTISGHSCAVFRVIFARNDSQLISADSAGI 588
Query: 488 VKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXX 547
+K+WT++T +C + D H DKIW+L+ F T G+D + +W D T
Sbjct: 589 IKIWTIKTADCECSIDAHTDKIWSLSKNHNESEFVTAGTDGRIVVWKDVTEEKQKAEDNK 648
Query: 548 XXXXVLRGQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCRKREAELQIEKALHAL 607
+ + Q L N + Y++A+ A L +P F++ ++ + E ++ A+ L
Sbjct: 649 RREAIEQDQTLTNLLSQKRYSEALVFALTLAKPFCAFKVINALMAEETPE-ELGSAIRRL 707
Query: 608 GKEEIRQLLEYVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEGLIPYTQR 667
+I LL++ +WNT + VAQ VL+++ +I P E++ + G +E +PYTQR
Sbjct: 708 DTRQIEILLQFTVKWNTNSRTSSVAQRVLYEIVHIVDPEELVSMPGAYGYIESFLPYTQR 767
Query: 668 HFSRIDRLVRSTFLLDY 684
H R+DR + L D+
Sbjct: 768 HMDRLDRAKQDVSLFDF 784
Score = 214 (80.4 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 87/339 (25%), Positives = 163/339 (48%)
Query: 46 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
LL +GS D V+VW+L ++C TL K S V S + L+ + +NL+++
Sbjct: 123 LLATGSADHIVKVWNLTEQQCTHTL-KGPS-VVSAILFGKHEKLVVGYIEGQLNLYNIMR 180
Query: 106 YSCKLTVPTYEM----VEAVCAIPPGSAF-----DSFLSSYN---QQTIKKKRRSLEIHF 153
+ K V T++ + A+ +P D +S + Q+T++ I
Sbjct: 181 GAPKKLVNTWKSHNSHITALLQVPDSRVVVALSRDQTMSIHETETQETLRVLPLYESIEG 240
Query: 154 ITVGERGIVRMWNADSACL-YEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQ 212
+G G + + + +++ + + S A V+ SN+ L ++A+Q
Sbjct: 241 GAIGHNGNLFTVGEEGVVKEFVIETAKLVRKKRIASSNLDHLAYDVV-SNR-FLAISAEQ 298
Query: 213 QLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSM 272
L++ ++ K +++++VG+++EI LG++E ++AVA+N ++++Y+ ++
Sbjct: 299 NLII---LDFENLK----IARQIVGFHDEIYSCCLLGKDESHMAVASNTSEIRLYNTKTL 351
Query: 273 SCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW----DSESRCC-----VGVG 323
C ++ GH+E VL + + + L+ + SKDNS+ W E+ C V
Sbjct: 352 DCQ-LIRGHTESVLSVVSPTWDTS--LLASCSKDNSIIFWRLVTSPENDSCSTLVPVAAA 408
Query: 324 TGHMGAVGAVAFSKKLQN-FLVSGSSDHTIKVWSFDGLS 361
TGH V A+A S + FL S S+D TIK+W G+S
Sbjct: 409 TGHANTVTALAISNTGRAPFLASVSTDCTIKLWGL-GVS 446
Score = 131 (51.2 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 72/355 (20%), Positives = 138/355 (38%)
Query: 73 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 132
H + + M +G L + D +V +W+L + C T+ +V A+
Sbjct: 108 HTAPILVMEFNEEGHLLATGSADHIVKVWNLTEQQCTHTLKGPSVVSAI----------- 156
Query: 133 FLSSYNQQTIKKKRRSLEIHFITVGE-RGIVRMW---NADSACLYEQKSSDVTISFEMDD 188
+ + + L ++ I G + +V W N+ L + S V ++ D
Sbjct: 157 LFGKHEKLVVGYIEGQLNLYNIMRGAPKKLVNTWKSHNSHITALLQVPDSRVVVALSRDQ 216
Query: 189 SKRGFTAAT-----VLPSNQGLLCVTADQQLLLYTTVE---VPEKKME---LILSKRLVG 237
+ T VLP + + L+T E V E +E L+ KR+
Sbjct: 217 TMSIHETETQETLRVLPLYESIEGGAIGHNGNLFTVGEEGVVKEFVIETAKLVRKKRIAS 276
Query: 238 YNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAG-HSEIVLCLDTCALSSG 296
N + L + ++LA++ + + + D ++ + + G H EI C C L
Sbjct: 277 SNLDHLAYDVVSN--RFLAISAE-QNLIILDFENLKIARQIVGFHDEIYSC---CLLGKD 330
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
+ + S + +RL+++++ C + GH +V +V + L S S D++I W
Sbjct: 331 ESHMAVASNTSEIRLYNTKTLDCQLI-RGHTESVLSVVSPTWDTSLLASCSKDNSIIFWR 389
Query: 357 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS--LVCTGSQDRTACVWRL 409
S + + L A H + +LA++ + + S D T +W L
Sbjct: 390 LV-TSPENDSCSTLVPVAAATGHANTVTALAISNTGRAPFLASVSTDCTIKLWGL 443
Score = 127 (49.8 bits), Expect = 0.00027, P = 0.00027
Identities = 30/114 (26%), Positives = 54/114 (47%)
Query: 7 GADRKVLVWDVDG-----GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
G D+ V +W VD G GH+ V + F ++ K L S S D T+++W++
Sbjct: 496 GMDKLVKLWQVDTHKMQLGIAGT-LSGHRRGVGDVKFAKNSHK--LASCSGDMTIKIWNI 552
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY 115
K C+ T+ H V + + S LISA ++ +W ++ C+ ++ +
Sbjct: 553 SEKSCLQTISGHSCAVFRVIFARNDSQLISADSAGIIKIWTIKTADCECSIDAH 606
Score = 118 (46.6 bits), Expect = 7.7e-68, Sum P(2) = 7.7e-68
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA---K 64
AD V VW++ CTH KG VVS+ILF +K L G + + +++++ K
Sbjct: 129 ADHIVKVWNLTEQQCTHTLKG-PSVVSAILFGKH-EK--LVVGYIEGQLNLYNIMRGAPK 184
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVE 119
K V T H S +T++ D +++ RD+ +++ + +P YE +E
Sbjct: 185 KLVNTWKSHNSHITALLQVPDSRVVVALSRDQTMSIHETETQETLRVLPLYESIE 239
Score = 42 (19.8 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 83 TSDGSTLISAGRDKVVNLWDLRDYSCKLTV--PTYEMVEAVCAIPPGSAFDSFLSSYNQQ 140
+++G L S + VV + DL D + T+ P E+ A+ + L +YN Q
Sbjct: 26 SANGQKLFSTCTN-VVKVIDLADNTASYTIGDPEDELRITCTAVDKNR--NRLLVAYNNQ 82
Query: 141 TIKK 144
I++
Sbjct: 83 IIRE 86
>UNIPROTKB|I3LPF4 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR011044 SUPFAM:SSF50969
GeneTree:ENSGT00690000102183 Ensembl:ENSSSCT00000026390 OMA:LKDSFLV
Uniprot:I3LPF4
Length = 749
Score = 489 (177.2 bits), Expect = 7.2e-61, Sum P(3) = 7.2e-61
Identities = 126/360 (35%), Positives = 191/360 (53%)
Query: 229 LILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL 288
L L K+ GY+EE+LD++FLG E ++ VA+N ++V++L + +C +L GH++IVL L
Sbjct: 309 LQLQKQFAGYSEEVLDVRFLGPENSHVVVASNSPCLKVFELQTSACQ-ILHGHTDIVLAL 367
Query: 289 DTCALSSGKILIVTGSKDNSVRLWDSESR---CCVGVGTGHMGAVGAVAFSKKLQNFLVS 345
D G L + +KD S+R+W CV G+GH +VG + S+ ++FLV+
Sbjct: 368 DV--FRKGW-LFASCAKDQSIRIWRINKAGLVACVAQGSGHTHSVGTICCSRLKESFLVT 424
Query: 346 GSSDHTIKVWSF-DGLSDDAEQPMN----LKAKAVVAAHGKDINSLAVAPNDSLVCTGS- 399
GS D T+K+W + L + P + L+A+A H D + G+
Sbjct: 425 GSQDCTVKLWPLPEALPSRSTAPDSGPVLLQAQATQRCH------------DKVTAHGTR 472
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
Q R L D F GH+RG+W V+FSP+DQV ++ GD I + +T
Sbjct: 473 QGRGRAFAGLGD------FSGHRRGLWCVQFSPMDQV-LSPPGD--ISTPPLPP----QT 519
Query: 460 FEGHTSSVLRASFLTR-----GAQIVSC---GADGLVKLWTVRTGECIATYDKHEDKIWA 511
FEGH +SVLR +F+++ G C G+DGLVKLWT+++ EC+ T D HEDK+W
Sbjct: 520 FEGHDASVLRVAFVSQLGTGPGLSASRCRPSGSDGLVKLWTIKSNECVRTLDAHEDKVWG 579
Query: 512 LAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAI 571
L + + T SD+ V LW D T V+R QEL+N + + Y +A+
Sbjct: 580 LHCSRLDDRALTAASDSRVILWKDVTEEEQAEEEARREEEVVRQQELDNLLHEKRYLRAL 639
Score = 279 (103.3 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 96/325 (29%), Positives = 153/325 (47%)
Query: 89 LISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG---SAFDSFLSSYNQQTIKKK 145
L S+ D + +W L+D SC + + A G S D + ++ Q+++
Sbjct: 161 LFSSAADASIRVWSLQDRSCLAVLTAHYSAAAQALAGAGGHSSGRDKICTVWDLQSLQAT 220
Query: 146 R-----RSLEIHFITVGE--------------RGIVRMWNADSA-CLYEQKSSDVTISFE 185
+ S+E + E GI+R+W A S C++ Q
Sbjct: 221 KTVPVFESVEAAVLLPEEPAPELGVTQQPPTPTGILRVWEAASGQCVHAQP--------R 272
Query: 186 MDDSKRGFTAATVLPSNQGL-LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILD 244
+ + T L GL L VTAD LLLY E + L L K+ GY+EE+LD
Sbjct: 273 LPGPGQELTHCA-LARAAGLRLSVTADHNLLLY------EAR-SLQLQKQFAGYSEEVLD 324
Query: 245 LKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGS 304
++FLG E ++ VA+N ++V++L + +C +L GH++IVL LD G L + +
Sbjct: 325 VRFLGPENSHVVVASNSPCLKVFELQTSACQ-ILHGHTDIVLALDV--FRKGW-LFASCA 380
Query: 305 KDNSVRLWDSESR---CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF-DGL 360
KD S+R+W CV G+GH +VG + S+ ++FLV+GS D T+K+W + L
Sbjct: 381 KDQSIRIWRINKAGLVACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEAL 440
Query: 361 SDDAEQPMN----LKAKAVVAAHGK 381
+ P + L+A+A H K
Sbjct: 441 PSRSTAPDSGPVLLQAQATQRCHDK 465
Score = 174 (66.3 bits), Expect = 7.2e-61, Sum P(3) = 7.2e-61
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 40 PDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVN 99
PD + LLFS + DA++RVW L + C+A L H+S + A+ G S+GRDK+
Sbjct: 154 PDPARLLLFSSAADASIRVWSLQDRSCLAVLTAHYS-AAAQALAGAGGH--SSGRDKICT 210
Query: 100 LWDLRDYSCKLTVPTYEMVEAVCAIP 125
+WDL+ TVP +E VEA +P
Sbjct: 211 VWDLQSLQATKTVPVFESVEAAVLLP 236
Score = 121 (47.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 51/242 (21%), Positives = 95/242 (39%)
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
++L+ + + D S+R+W + R C+ V T H A A A + + S D VW
Sbjct: 158 RLLLFSSAADASIRVWSLQDRSCLAVLTAHYSAA-AQALAGAGGH---SSGRDKICTVWD 213
Query: 357 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVA---PNDSLVCTGSQDRTA-CVWRLPDL 412
L P+ +A V + L V P + + + + CV P L
Sbjct: 214 LQSLQATKTVPVFESVEAAVLLPEEPAPELGVTQQPPTPTGILRVWEAASGQCVHAQPRL 273
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 472
G + + + + ++ + D + ++ K F G++ VL F
Sbjct: 274 P------GPGQELTHCALARAAGLRLSVTADHNLLLYEARSLQLQKQFAGYSEEVLDVRF 327
Query: 473 L-TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 531
L + +V +K++ ++T C + H D + AL V +K +FA+ D +
Sbjct: 328 LGPENSHVVVASNSPCLKVFELQTSACQILHG-HTDIVLALDVFRKGWLFASCAKDQSIR 386
Query: 532 LW 533
+W
Sbjct: 387 IW 388
Score = 54 (24.1 bits), Expect = 7.2e-61, Sum P(3) = 7.2e-61
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 653 GISDVLEGLIPYTQRHFSRIDRLVRSTFLLDYTLTGMSV 691
G++ + P +RHF R+ R +++ LD+ M +
Sbjct: 701 GVAGRQDSCCPPPERHFQRLSRTLQAAAFLDFLWHSMKL 739
Score = 47 (21.6 bits), Expect = 1.3e-47, Sum P(3) = 1.3e-47
Identities = 34/193 (17%), Positives = 65/193 (33%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + VW + C H + L S G D VWDL + +
Sbjct: 166 ADASIRVWSLQDRSCLAVLTAHYSAAAQALAGAGGHSS----GRDKICT-VWDLQSLQAT 220
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDK-----VVNLWDLRDYSC-----KLTVPTYEM 117
T+ S ++ + + + + + ++ +W+ C +L P E+
Sbjct: 221 KTVPVFESVEAAVLLPEEPAPELGVTQQPPTPTGILRVWEAASGQCVHAQPRLPGPGQEL 280
Query: 118 VEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGI-VRMWNADSACLYEQK 176
A G S + +N + + L+ F E + VR +++ +
Sbjct: 281 THCALARAAGLRL-SVTADHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPENSHVVVAS 339
Query: 177 SSDVTISFEMDDS 189
+S FE+ S
Sbjct: 340 NSPCLKVFELQTS 352
>ASPGD|ASPL0000073843 [details] [associations]
symbol:AN4460 species:162425 "Emericella nidulans"
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 EMBL:BN001303
GO:GO:0006364 GO:GO:0032040 EMBL:AACD01000077 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP OrthoDB:EOG4DZ53K RefSeq:XP_662064.1
ProteinModelPortal:Q5B4S0 STRING:Q5B4S0
EnsemblFungi:CADANIAT00005992 GeneID:2872260 KEGG:ani:AN4460.2
Uniprot:Q5B4S0
Length = 977
Score = 305 (112.4 bits), Expect = 2.7e-58, Sum P(4) = 2.7e-58
Identities = 75/190 (39%), Positives = 103/190 (54%)
Query: 314 SESRCCVGVGTGHMGAVGAVAFS-----------KKLQN----FLVSGSSDHTIKVWSFD 358
+ S C + TGH ++GA++F K N F+++GS D T+K W+
Sbjct: 465 NSSYTCFALLTGHAESLGAISFPRDSPPPDTPAYKAPVNHPPPFVITGSQDRTVKRWNVG 524
Query: 359 GLSDD-AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 417
L +P KA AH KDIN+L V+P+ +L + SQDRT +W D V
Sbjct: 525 KLGPTIGNKPHTPKALFTRKAHDKDINALDVSPSSALFASASQDRTVKIWSADDGSVVGV 584
Query: 418 FRGHKRGIWSVEFSP-------VDQ-------VVITASGDKTIKIWSISDGSCLKTFEGH 463
RGHKRG+WS FSP D +++T SGDKT+K+WS+SD SCL TFEGH
Sbjct: 585 LRGHKRGVWSARFSPKGTPILSADAKSSTNRGMIVTGSGDKTVKLWSLSDYSCLLTFEGH 644
Query: 464 TSSVLRASFL 473
T+SVL+ +L
Sbjct: 645 TNSVLKVLWL 654
Score = 207 (77.9 bits), Expect = 6.3e-34, Sum P(3) = 6.3e-34
Identities = 90/369 (24%), Positives = 155/369 (42%)
Query: 270 SSMSCSYVLAGHSEIVLCL---------DTCA----LSSGKILIVTGSKDNSVRLWDSES 316
SS +C +L GH+E + + DT A ++ ++TGS+D +V+ W+
Sbjct: 466 SSYTCFALLTGHAESLGAISFPRDSPPPDTPAYKAPVNHPPPFVITGSQDRTVKRWNVGK 525
Query: 317 RCCVGVGTGHMGAVGAVAFSKKLQN-------------FLVSGSSDHTIKVWSFDGLSDD 363
+G G+ F++K + S S D T+K+WS +DD
Sbjct: 526 ---LGPTIGNKPHTPKALFTRKAHDKDINALDVSPSSALFASASQDRTVKIWS----ADD 578
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKR 423
V+ H + + S +P + + S D + R +VT G K
Sbjct: 579 GS------VVGVLRGHKRGVWSARFSPKGTPIL--SADAKSSTNR----GMIVTGSGDKT 626
Query: 424 -GIWSV-EFSPVDQVVITASG--DKTIKI-WSISDGSCLKTF--EGHTSSVLRASFLTRG 476
+WS+ ++S ++T G + +K+ W KT E ++ + + +
Sbjct: 627 VKLWSLSDYS----CLLTFEGHTNSVLKVLWLPPPDMSSKTEDEEDEDAAASKPNSIQLR 682
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA--------------VGKKTEMFA 522
+ S ADGLVK+W+ TGE T D H D++WALA K T +A
Sbjct: 683 PLVASAAADGLVKIWSPYTGELETTLDNHTDRVWALASPTPSGTRDDVNSSATKSTSPYA 742
Query: 523 --TGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRP 580
+G +D+ V W D+T + + Q+L+N ++ Y +AI +A +L P
Sbjct: 743 IASGSADSTVTFWTDTTSATYTAAVNANSARIEQDQQLQNYIVAGAYREAITLALQLNHP 802
Query: 581 HKLFELFAS 589
+L LF++
Sbjct: 803 ARLLSLFSA 811
Score = 178 (67.7 bits), Expect = 2.7e-58, Sum P(4) = 2.7e-58
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 47 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
L SGS++ VRVWDL KK +A+LD H S V S++ + + L+SAGRDK V +WD+R +
Sbjct: 209 LASGSEEGKVRVWDLNKKKSIASLDSHVSVVRSLSYSLTENALLSAGRDKTVIVWDMRTF 268
Query: 107 SCKLTVPTYEMVEAVCAIPPG 127
+ +P E EA + G
Sbjct: 269 KTRRIIPVLESAEAASFVAEG 289
Score = 172 (65.6 bits), Expect = 2.7e-58, Sum P(4) = 2.7e-58
Identities = 59/203 (29%), Positives = 96/203 (47%)
Query: 157 GERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL 216
GE G +R+W+ C + +VT E A P + V ADQ L L
Sbjct: 296 GEYGRLRVWD----C---NRGGEVTGDQEAAPEFEAIIAIHYTPGMSFAMTVHADQTLRL 348
Query: 217 YTTVEVPEKKM-----ELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQV----- 266
++ + K L + +R+ G +++I+DL ++G + LA+ATN E +++
Sbjct: 349 HSLEPLSNLKPGTTIDPLPVVRRISGNDDDIIDLAYVGPDRSMLALATNTESIRIVSVGP 408
Query: 267 --YDLSSMSCSYV------LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW----DS 314
Y S+ Y L GH +I++C+D SG L TG+KDN+ RLW +
Sbjct: 409 SDYRPSTDGQEYFGADIAHLDGHDDIIICIDVDW--SGHWL-ATGAKDNTARLWRLDPQN 465
Query: 315 ESRCCVGVGTGHMGAVGAVAFSK 337
S C + TGH ++GA++F +
Sbjct: 466 SSYTCFALLTGHAESLGAISFPR 488
Score = 130 (50.8 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 49/212 (23%), Positives = 87/212 (41%)
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
T A S L+ TG+ D S+++WD GH G + A+ F + +++
Sbjct: 116 TTATDSTGTLLATGAADGSIKVWDIRGGYITHSFHGHGGVISALCFFQP-------PTAE 168
Query: 350 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD--INSLAVAPNDS---LVCTGSQDRTA 404
H DG ++P K K +A D + L A N + + +GS++
Sbjct: 169 H-------DGKLSSKKKP---KRKTGMAGDDDDNEMMDLDSASNSNGAFRLASGSEEGKV 218
Query: 405 CVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
VW L S+ + H + S+ +S + +++A DKT+ +W + +
Sbjct: 219 RVWDLNKKKSIASLDSHVSVVRSLSYSLTENALLSAGRDKTVIVWDMRTFKTRRIIPV-L 277
Query: 465 SSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 496
S ASF+ G + G G +++W G
Sbjct: 278 ESAEAASFVAEGGLCLVGGEYGRLRVWDCNRG 309
Score = 122 (48.0 bits), Expect = 2.7e-58, Sum P(4) = 2.7e-58
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 600 IEKALHALGKEEIRQLLEYVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGIS---- 655
I++ L L + L+ +R+WNT + VAQ +LF LF +P + +E+ S
Sbjct: 839 IDEVLQTLDPANLYVLVLRLRDWNTNARHSKVAQRILFALFRSYPASTFVELASSSIAKR 898
Query: 656 -----------DVLEGLIPYTQRHFSRIDRLVRSTFLLDYTLTGM 689
D+L+ L YT+RH+ R++ L ++L+++ L M
Sbjct: 899 NGDGRAAAAMKDILQALASYTERHYRRVEELEDESYLVEWVLGEM 943
Score = 110 (43.8 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 39/157 (24%), Positives = 63/157 (40%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 86
K H ++++ P + +L S S D TV++W V L H V S + G
Sbjct: 544 KAHDKDINALDVSPSS--ALFASASQDRTVKIWSADDGSVVGVLRGHKRGVWSARFSPKG 601
Query: 87 STLISAGR--------------DKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGSAFD 131
+ ++SA DK V LW L DYSC LT + V V +PP
Sbjct: 602 TPILSADAKSSTNRGMIVTGSGDKTVKLWSLSDYSCLLTFEGHTNSVLKVLWLPPPDMSS 661
Query: 132 SFLSSYNQQTIKKKRRSLEIHFITVGER--GIVRMWN 166
++ K S+++ + G+V++W+
Sbjct: 662 KTEDEEDEDAAASKPNSIQLRPLVASAAADGLVKIWS 698
Score = 101 (40.6 bits), Expect = 4.1e-09, Sum P(3) = 4.1e-09
Identities = 25/81 (30%), Positives = 37/81 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHP------------DTDKSLLFSGSDDATV 56
DR V +W D G +GHK V S F P T++ ++ +GS D TV
Sbjct: 568 DRTVKIWSADDGSVVGVLRGHKRGVWSARFSPKGTPILSADAKSSTNRGMIVTGSGDKTV 627
Query: 57 RVWDLLAKKCVATLDKHFSRV 77
++W L C+ T + H + V
Sbjct: 628 KLWSLSDYSCLLTFEGHTNSV 648
Score = 100 (40.3 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 288 LDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS 347
LD+ + S+G + +GS++ VR+WD + + H+ V ++++S +N L+S
Sbjct: 197 LDSASNSNGAFRLASGSEEGKVRVWDLNKKKSIASLDSHVSVVRSLSYSLT-ENALLSAG 255
Query: 348 SDHTIKVW 355
D T+ VW
Sbjct: 256 RDKTVIVW 263
Score = 91 (37.1 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 45/242 (18%), Positives = 97/242 (40%)
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
+SG++L+ ++D V ++ ++ G G + + ++A + + ++ S +++
Sbjct: 29 ASGRLLVACVNEDALVVDLETGNQLATLDGDGEV--ITSLAITPSASHVILCSRS-MSMR 85
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
++S +D + K + H + + A +L+ TG+ D + VW +
Sbjct: 86 IYSLSQY-EDTTPTLETKLVRSLKPHTAPVVTTATDSTGTLLATGAADGSIKVWDIRGGY 144
Query: 414 SVVTFRGHKRGIWSVEF--SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRAS 471
+F GH I ++ F P + S K K G + + AS
Sbjct: 145 ITHSFHGHGGVISALCFFQPPTAEHDGKLSSKKKPKR---KTGMAGDDDDNEMMDLDSAS 201
Query: 472 FLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 531
++ S +G V++W + + IA+ D H + +L+ + G D V
Sbjct: 202 NSNGAFRLASGSEEGKVRVWDLNKKKSIASLDSHVSVVRSLSYSLTENALLSAGRDKTVI 261
Query: 532 LW 533
+W
Sbjct: 262 VW 263
Score = 87 (35.7 bits), Expect = 7.5e-49, Sum P(4) = 7.5e-49
Identities = 37/144 (25%), Positives = 61/144 (42%)
Query: 4 LLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-- 61
L+ + LV D++ G G V++S+ P +L S S ++R++ L
Sbjct: 34 LVACVNEDALVVDLETGNQLATLDGDGEVITSLAITPSASHVILCSRS--MSMRIYSLSQ 91
Query: 62 -------LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD-YSCKLTVP 113
L K V +L H + V + A S G+ L + D + +WD+R Y
Sbjct: 92 YEDTTPTLETKLVRSLKPHTAPVVTTATDSTGTLLATGAADGSIKVWDIRGGYITHSFHG 151
Query: 114 TYEMVEAVCAI-PPGSAFDSFLSS 136
++ A+C PP + D LSS
Sbjct: 152 HGGVISALCFFQPPTAEHDGKLSS 175
Score = 66 (28.3 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 72/359 (20%), Positives = 126/359 (35%)
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL----RDYSCKLTVPTYEMVEAVC 122
+A LD H + + + G L + +D LW L Y+C + + E++
Sbjct: 425 IAHLDGHDDIIICIDVDWSGHWLATGAKDNTARLWRLDPQNSSYTCFALLTGH--AESLG 482
Query: 123 AIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADS-ACLYEQKSSDVT 181
AI +F + K IT + V+ WN K
Sbjct: 483 AI----SFPRDSPPPDTPAYKAPVNHPPPFVITGSQDRTVKRWNVGKLGPTIGNKPHTPK 538
Query: 182 ISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTT-----VEVPEKKMELILSKRLV 236
F + A V PS+ + D+ + +++ V V + S R
Sbjct: 539 ALFTRKAHDKDINALDVSPSSALFASASQDRTVKIWSADDGSVVGVLRGHKRGVWSARFS 598
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQ-VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSS 295
IL + + V + ++ V+++ LS SC GH+ VL
Sbjct: 599 PKGTPILSADAKSSTNRGMIVTGSGDKTVKLWSLSDYSCLLTFEGHTNSVL--------- 649
Query: 296 GKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
K+L + D S + D E A + S +L+ + S ++D +K+W
Sbjct: 650 -KVLWLP-PPDMSSKTEDEEDE----------DAAASKPNSIQLRPLVASAAADGLVKIW 697
Query: 356 S-FDG-----LSDDAEQPMNLKAKAVVAAHGKDINSLAV-APNDSLVCTGSQDRTACVW 407
S + G L + ++ L A + D+NS A + + + +GS D T W
Sbjct: 698 SPYTGELETTLDNHTDRVWAL-ASPTPSGTRDDVNSSATKSTSPYAIASGSADSTVTFW 755
Score = 61 (26.5 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 44 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 88
+ L+ S + D V++W + TLD H RV ++A + T
Sbjct: 682 RPLVASAAADGLVKIWSPYTGELETTLDNHTDRVWALASPTPSGT 726
Score = 59 (25.8 bits), Expect = 6.2e-05, Sum P(3) = 6.2e-05
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDD 53
D+ V +W + C F+GH V +L+ P D S +D
Sbjct: 624 DKTVKLWSLSDYSCLLTFEGHTNSVLKVLWLPPPDMSSKTEDEED 668
Score = 58 (25.5 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 395 VCTGSQDRTACVWRL-PDLVSVVTFR---GHKRGIWSVEFSPVD 434
+ TG++D TA +WRL P S F GH + ++ F P D
Sbjct: 447 LATGAKDNTARLWRLDPQNSSYTCFALLTGHAESLGAISF-PRD 489
Score = 57 (25.1 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 22/76 (28%), Positives = 29/76 (38%)
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT--GECIATYDKHEDKIWALAVGKK 517
+ G S+L + T +IVS G + G IA D H+D I + V
Sbjct: 384 YVGPDRSMLALATNTESIRIVSVGPSDYRPSTDGQEYFGADIAHLDGHDDIIICIDVDWS 443
Query: 518 TEMFATGGSDALVNLW 533
ATG D LW
Sbjct: 444 GHWLATGAKDNTARLW 459
Score = 57 (25.1 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 47 LFSGSDDATVRVWDL--LAK---------KCVATLDKHFSRVTSMAITSDGSTLISAGRD 95
+ +GS D TV+ W++ L K + T H + ++ ++ + SA +D
Sbjct: 509 VITGSQDRTVKRWNVGKLGPTIGNKPHTPKALFTRKAHDKDINALDVSPSSALFASASQD 568
Query: 96 KVVNLWDLRDYS 107
+ V +W D S
Sbjct: 569 RTVKIWSADDGS 580
Score = 49 (22.3 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 28/115 (24%), Positives = 49/115 (42%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW-- 312
L VA E V DL + + L G E++ L A++ ++ S+ S+R++
Sbjct: 33 LLVACVNEDALVVDLETGNQLATLDGDGEVITSL---AITPSASHVILCSRSMSMRIYSL 89
Query: 313 ----DS----ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
D+ E++ + H V A + L +G++D +IKVW G
Sbjct: 90 SQYEDTTPTLETKLVRSLKP-HTAPVVTTA-TDSTGTLLATGAADGSIKVWDIRG 142
Score = 48 (22.0 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 25 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK----CVATLDKHFSRVTSM 80
+ GH ++ I D L +G+ D T R+W L + C A L H + ++
Sbjct: 427 HLDGHDDII--ICIDVDWSGHWLATGAKDNTARLWRLDPQNSSYTCFALLTGHAESLGAI 484
Query: 81 AITSD 85
+ D
Sbjct: 485 SFPRD 489
Score = 47 (21.6 bits), Expect = 3.1e-17, Sum P(3) = 3.1e-17
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 177 SSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELIL 231
S+D T++F D + +TAA N + DQQL Y + + L L
Sbjct: 747 SADSTVTFWTDTTSATYTAAV----NANSARIEQDQQLQNYIVAGAYREAITLAL 797
Score = 44 (20.5 bits), Expect = 2.1e-44, Sum P(4) = 2.1e-44
Identities = 18/59 (30%), Positives = 25/59 (42%)
Query: 3 ALLE-GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
ALL G D+ V+VWD+ F T + F + L G + +RVWD
Sbjct: 250 ALLSAGRDKTVIVWDMRT-FKTRRIIPVLESAEAASFV--AEGGLCLVGGEYGRLRVWD 305
>UNIPROTKB|J9PAK6 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0006364 GO:GO:0032040 GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000048785 Uniprot:J9PAK6
Length = 346
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 106/267 (39%), Positives = 156/267 (58%)
Query: 425 IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA 484
I + E SP DQV+ TAS D TIK+W++ D SCLKTFEGH +SVL+ F++RG Q++S G+
Sbjct: 66 ITAFELSPDDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSSGS 125
Query: 485 DGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXX 544
DGLVKLWT++ EC+ T D HEDK+W L + + TG SD+ V LW D T
Sbjct: 126 DGLVKLWTIKNNECVKTLDAHEDKVWGLHCSRLDDRALTGASDSCVILWKDVTEEEQSEE 185
Query: 545 XXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCRKREAELQIEKAL 604
V++ QEL+N + + Y +A+ +A L RPH + + ++ R EA ++ +
Sbjct: 186 QARREEEVVKQQELDNLLYEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACKKLGATV 245
Query: 605 HALGKEEIRQLLEYVREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEGLIPY 664
L +++ LL + WNT + CH AQ VL L P E++ G+ LE L+PY
Sbjct: 246 LRLRRDQKEALLRFCVTWNTNSRHCHEAQAVLGVLLRHEAPEELLAYPGVQASLEALLPY 305
Query: 665 TQRHFSRIDRLVRSTFLLDYTLTGMSV 691
T+RHF R+ R +++ LD+ M +
Sbjct: 306 TERHFQRLSRTLQAATFLDFLWHNMKL 332
Score = 156 (60.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 36/119 (30%), Positives = 59/119 (49%)
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 440
+DI + ++P+D ++ T S D T +W L D + TF GH + V F ++++
Sbjct: 64 EDITAFELSPDDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSS 123
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSV--LRASFLTRGAQIVSCGADGLVKLWTVRTGE 497
D +K+W+I + C+KT + H V L S L A ++ +D V LW T E
Sbjct: 124 GSDGLVKLWTIKNNECVKTLDAHEDKVWGLHCSRLDDRA--LTGASDSCVILWKDVTEE 180
Score = 126 (49.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 38 FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKV 97
F D +L + S D T+++W L C+ T + H + V + S G+ L+S+G D +
Sbjct: 69 FELSPDDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSSGSDGL 128
Query: 98 VNLWDLRDYSCKLTVPTYE 116
V LW +++ C T+ +E
Sbjct: 129 VKLWTIKNNECVKTLDAHE 147
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 301 (111.0 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 77/321 (23%), Positives = 144/321 (44%)
Query: 216 LYTTVEVPEKKMELILSKRLV--GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMS 273
LYT + + + + + + R+ G+ ++ L F + L+ A E V++++ S++
Sbjct: 386 LYT-LNLSAQVPQAVRASRITIGGHRSDVRTLAFSSDNIAVLSGAA--ESVKIWNRSTLQ 442
Query: 274 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAV 333
C + E LC G ++ G+K ++L+D S + H GAV ++
Sbjct: 443 CIRTM--DCEYALC---SLFVPGDRQVIVGTKTGKLQLYDLASGTLMETLNAHDGAVWSI 497
Query: 334 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAV-VAAHGKDINSLAVAPND 392
A S + F V+G +D +K W F+ + D++ L K V + +D+ + +PN
Sbjct: 498 ALSPDQRGF-VTGGADKCVKFWDFELVKDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQ 556
Query: 393 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
L+ D T V+ L ++ GHK + ++ S ++ T S D+ +KIW +
Sbjct: 557 KLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDISYDGALIATGSADRNVKIWGLD 616
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
G C ++ H SV+ F+ + + G D +K W E I T + H ++W L
Sbjct: 617 FGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDADKFEHIQTLEGHHQEVWCL 676
Query: 513 AVGKKTEMFATGGSDALVNLW 533
A+ + + D + LW
Sbjct: 677 ALSPNGDYVVSASHDKSLRLW 697
Score = 189 (71.6 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 39/161 (24%), Positives = 79/161 (49%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ K + L +P+ + G +D + ++ L + V F GHK + ++++
Sbjct: 57 KVLILKGSKHESCLRPSPDGLHLAVGYEDGSIRIFSLLSGEASVAFNGHKAAVTALQYDQ 116
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+ +++ S D + +W + + S L +GH +V + FL +V+ G D LVK W
Sbjct: 117 LGGRLVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWD 176
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ T C T H ++W +A+ + + TG +D+ + +W
Sbjct: 177 LDTQHCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVW 217
Score = 158 (60.7 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 42/130 (32%), Positives = 64/130 (49%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+ D V+VWDV + KGHK V+ +LF + K+LL + D V+ WDL
Sbjct: 121 LVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKE--KNLLVTSGKDTLVKWWDLD 178
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC 122
+ C TL H + V MA+ S+ LI+ D + +WD+ Y +L P +
Sbjct: 179 TQHCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVWDIT-YIQELEDPDEPESKKSK 237
Query: 123 AIPPGSAFDS 132
PG+ D+
Sbjct: 238 GSSPGAEKDN 247
Score = 156 (60.0 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 103/472 (21%), Positives = 184/472 (38%)
Query: 252 EQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 311
++ + V T ++Q+YDL+S + L H V + ALS + VTG D V+
Sbjct: 461 DRQVIVGTKTGKLQLYDLASGTLMETLNAHDGAVWSI---ALSPDQRGFVTGGADKCVKF 517
Query: 312 WD-----SESRCCVGVGTGHMGA------VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 360
WD ES + + V V +S Q L D T+KV+ D
Sbjct: 518 WDFELVKDESSIQKRLSMKQVRILQLDEDVLCVRYSPN-QKLLAVSLLDCTVKVFYTD-- 574
Query: 361 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG 420
LK + H + + ++ + +L+ TGS DR +W L +
Sbjct: 575 --------TLKFFLSLYGHKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFA 626
Query: 421 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 480
H + ++F + TA D IK W ++T EGH V + G +V
Sbjct: 627 HDDSVMYLQFVAKSHLFFTAGKDNKIKQWDADKFEHIQTLEGHHQEVWCLALSPNGDYVV 686
Query: 481 SCGADGLVKLWTVRTGECIATYDKHE---DKIWALAVGKKTEMFATGGSDALVNLWHDST 537
S D ++LW RT E + ++ E + + +V K+ + G + L T
Sbjct: 687 SASHDKSLRLWE-RTREPLILEEEREMQREAEYEESVAKEEQPVVAGETQGETGLAGKKT 745
Query: 538 XXXXXXXXXXXXXXVLRGQELENAVLDADYTKAI--QVAFE----LRRPHKLF--ELFAS 589
L +E+ KA +V F LR + E
Sbjct: 746 IETIKAAERIMEAIELYREEMAKLKEHKAICKAAGKEVPFPANPILRAYGNITPSEYVLE 805
Query: 590 VCRKREAELQIEKALHALGKEEIRQLLEYVREW-NTKPKLCHVAQFVLFQLFNIHPPTEI 648
V +K ++ ++E++L L + LL E+ ++ + + +LF L IH
Sbjct: 806 VFKKVKSS-ELEESLLVLPFSYVPDLLRLFNEYIQLGAEIELLCRALLF-LLKIH----F 859
Query: 649 IEIKGISDVLEGLIPYTQRHFSRIDRLVRSTFLLDYTLTGMSVIEPDTEARE 700
+I G + +L +I ++ + I R+ + +L + + G+ ++ + EA++
Sbjct: 860 GQITG-NQMLVTVIENLKK--TTISRVSEARDVLGFNMAGLQYLKREIEAKD 908
Score = 138 (53.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 39/166 (23%), Positives = 73/166 (43%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
L G D +I+++S LS +A N AV A + V+ GS+D
Sbjct: 79 LAVGYEDGSIRIFSL--LSGEASVAFNGHKAAVTALQYDQLGGRLVS--------GSKDT 128
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
VW + + + +GHK + V F +++T+ D +K W + C KT G
Sbjct: 129 DVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQHCFKTLVG 188
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDK 508
H + V + ++ ++++ AD +++W + + + D+ E K
Sbjct: 189 HRTEVWGMALVSEEKRLITGTADSELRVWDITYIQELEDPDEPESK 234
Score = 135 (52.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 70/314 (22%), Positives = 137/314 (43%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
T+ H S V ++A +SD ++S G + V +W+ C + T + A+C++
Sbjct: 405 TIGGHRSDVRTLAFSSDNIAVLS-GAAESVKIWNRSTLQC---IRTMDCEYALCSL---- 456
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLY------EQKS----- 177
F+ Q + K L+++ + G ++ NA ++ +Q+
Sbjct: 457 ----FVPGDRQVIVGTKTGKLQLYDLASGT--LMETLNAHDGAVWSIALSPDQRGFVTGG 510
Query: 178 SDVTISF---EM--DDS---KR-GFTAATVLPSNQGLLCV--TADQQLLLYTTVEVPEK- 225
+D + F E+ D+S KR +L ++ +LCV + +Q+LL + ++ K
Sbjct: 511 ADKCVKFWDFELVKDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKV 570
Query: 226 ----KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGH 281
++ LS L G+ +L + + + +A + V+++ L C L H
Sbjct: 571 FYTDTLKFFLS--LYGHKLPVLCMD-ISYDGALIATGSADRNVKIWGLDFGDCHRSLFAH 627
Query: 282 SEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN 341
+ V+ L A S L T KDN ++ WD++ + GH V +A S +
Sbjct: 628 DDSVMYLQFVAKSH---LFFTAGKDNKIKQWDADKFEHIQTLEGHHQEVWCLALSPN-GD 683
Query: 342 FLVSGSSDHTIKVW 355
++VS S D ++++W
Sbjct: 684 YVVSASHDKSLRLW 697
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 59/303 (19%), Positives = 134/303 (44%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH+ V ++ F +D + SG+ ++ V++W+ +C+ T+D ++ + S+ + D
Sbjct: 408 GHRSDVRTLAF--SSDNIAVLSGAAES-VKIWNRSTLQCIRTMDCEYA-LCSLFVPGDRQ 463
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAF-----DSFLSSYNQQT 141
++ K+ L+DL + T+ ++ V ++ P F D + ++ +
Sbjct: 464 VIVGTKTGKL-QLYDLASGTLMETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFWDFEL 522
Query: 142 IK-----KKRRSL-EIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 195
+K +KR S+ ++ + + E + ++ + L D T+ D+ + F +
Sbjct: 523 VKDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQKLL-AVSLLDCTVKVFYTDTLKFFLS 581
Query: 196 ATVLPSNQGLLC--VTADQQLLLYTTVEVPEKKMELILS---KRLVGYNEEILDLKFLGE 250
+ +LC ++ D L+ + + K L + L +++ ++ L+F+ +
Sbjct: 582 --LYGHKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAK 639
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 310
+ + +++ +D L GH + V CL ALS +V+ S D S+R
Sbjct: 640 SHLFFTAGKD-NKIKQWDADKFEHIQTLEGHHQEVWCL---ALSPNGDYVVSASHDKSLR 695
Query: 311 LWD 313
LW+
Sbjct: 696 LWE 698
Score = 129 (50.5 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 30/104 (28%), Positives = 52/104 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++ + G + F GHK V+++ + D L SGS D V VWD++ + +
Sbjct: 85 DGSIRIFSLLSGEASVAFNGHKAAVTALQY--DQLGGRLVSGSKDTDVIVWDVINESGLY 142
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
L H VT + + + L+++G+D +V WDL C T+
Sbjct: 143 RLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQHCFKTL 186
Score = 129 (50.5 bits), Expect = 0.00020, P = 0.00020
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS-LLFSGSDDATVRVWDLLAKKC 66
ADR V +W +D G C H S+++ KS L F+ D ++ WD +
Sbjct: 606 ADRNVKIWGLDFGDCHRSLFAHD---DSVMYLQFVAKSHLFFTAGKDNKIKQWDADKFEH 662
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
+ TL+ H V +A++ +G ++SA DK + LW+
Sbjct: 663 IQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWE 698
Score = 128 (50.1 bits), Expect = 0.00026, P = 0.00026
Identities = 51/204 (25%), Positives = 85/204 (41%)
Query: 249 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
GE + +AV E V V+D +L G S+ CL S + + G +D S
Sbjct: 33 GERGRCVAVPA-CEHVFVWDARKGEKVLILKG-SKHESCLRP---SPDGLHLAVGYEDGS 87
Query: 309 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 368
+R++ S GH AV A+ + + L LVSGS D + VW D +++
Sbjct: 88 IRIFSLLSGEASVAFNGHKAAVTALQYDQ-LGGRLVSGSKDTDVIVW--DVINESGLY-- 142
Query: 369 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 428
LK H + + +L+ T +D W L T GH+ +W +
Sbjct: 143 RLKG------HKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGM 196
Query: 429 EFSPVDQVVITASGDKTIKIWSIS 452
++ +IT + D +++W I+
Sbjct: 197 ALVSEEKRLITGTADSELRVWDIT 220
Score = 124 (48.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
V V+D+ + S Y L GH + V L K L+VT KD V+ WD +++ C
Sbjct: 130 VIVWDVINESGLYRLKGHKDAVT--QVLFLKE-KNLLVTSGKDTLVKWWDLDTQHCFKTL 186
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSD--DAEQPMNLKAKAVVAAHGK 381
GH V +A + + L++G++D ++VW + + D ++P + K+K K
Sbjct: 187 VGHRTEVWGMALVSE-EKRLITGTADSELRVWDITYIQELEDPDEPESKKSKGSSPGAEK 245
Query: 382 D 382
D
Sbjct: 246 D 246
Score = 102 (41.0 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 28/92 (30%), Positives = 43/92 (46%)
Query: 12 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 71
V VWD G KG K S L P D L G +D ++R++ LL+ + +
Sbjct: 47 VFVWDARKGEKVLILKGSKH--ESCL-RPSPDGLHLAVGYEDGSIRIFSLLSGEASVAFN 103
Query: 72 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H + VT++ G L+S +D V +WD+
Sbjct: 104 GHKAAVTALQYDQLGGRLVSGSKDTDVIVWDV 135
Score = 51 (23.0 bits), Expect = 4.7e-16, Sum P(3) = 4.7e-16
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 270
K LVG+ E+ + + EE++ L T +++V+D++
Sbjct: 184 KTLVGHRTEVWGMALVSEEKR-LITGTADSELRVWDIT 220
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 316 (116.3 bits), Expect = 6.6e-34, Sum P(4) = 6.6e-34
Identities = 74/303 (24%), Positives = 147/303 (48%)
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 296
G+ +I L L +Q L V+T+ E V+V+++ S+SC +A + LC + G
Sbjct: 394 GHRSDIRSLS-LSSNDQML-VSTSSESVKVWNMKSLSCIRSIA--CDYGLCT---VFAPG 446
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
+ ++ G+K ++ +++ S V H G+V ++ + L+ + SG +D +K W
Sbjct: 447 NLHVIVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRG-VTSGGADKLVKFWD 505
Query: 357 FDGLS---DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
F+ ++ + + +NL + D+ +L + ++ + D T ++ +
Sbjct: 506 FELIASQENSKHKVLNLSLTKTLKVES-DVLALKYSADNKFLAVSLLDNTVKIFYTDTVK 564
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
++ GHK + ++ S ++IT S DK IKIW + G C K+F H S+++ SF+
Sbjct: 565 FHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFI 624
Query: 474 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+S D +K W E I T + H ++W+LA+G + F +G D + ++
Sbjct: 625 PSTHHFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIF 684
Query: 534 HDS 536
+ +
Sbjct: 685 NQT 687
Score = 196 (74.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 34/152 (22%), Positives = 69/152 (45%)
Query: 382 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 441
++ ++ ++ + +L+ +G D + +W + D F GH+ + ++ F+ + ++++ S
Sbjct: 61 EVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGS 120
Query: 442 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
D + +W I S L GH + L R +++ DG +K+W T CI T
Sbjct: 121 KDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQT 180
Query: 502 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
H + IW + V + SD + W
Sbjct: 181 IVGHRNPIWGIDVNPDETRLCSCTSDNQIRFW 212
Score = 176 (67.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 50/197 (25%), Positives = 87/197 (44%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 314
LA+ E++ ++DL + L +I + LS L+ +G D S+R+W
Sbjct: 30 LAITGCGERISIWDLRKQVLNQSLY-EEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSM 88
Query: 315 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 374
V GH G+V + F++ L N LVSGS D + VW D +++ L+
Sbjct: 89 SDYQLQAVFNGHRGSVTTMTFNR-LGNILVSGSKDTEVIVW--DIITESGL--FRLRG-- 141
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 434
H I S+ + + + T S+D +W + T GH+ IW ++ +P +
Sbjct: 142 ----HRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDE 197
Query: 435 QVVITASGDKTIKIWSI 451
+ + + D I+ W I
Sbjct: 198 TRLCSCTSDNQIRFWRI 214
Score = 169 (64.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 54/205 (26%), Positives = 92/205 (44%)
Query: 295 SGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGA-VGAVAFSKKLQNFLVSGSSDHTI 352
SGK L +TG + + +WD + + + A V V SK L SG SD +I
Sbjct: 27 SGK-LAITGCGER-ISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKD-GALLASGYSDGSI 83
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
++WS +SD + +AV H + ++ +++ +GS+D VW +
Sbjct: 84 RIWS---MSD-------YQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITE 133
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 472
+ RGH+ I SV+ +IT+S D IKIW C++T GH + +
Sbjct: 134 SGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDV 193
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGE 497
++ SC +D ++ W + + E
Sbjct: 194 NPDETRLCSCTSDNQIRFWRIPSNE 218
Score = 137 (53.3 bits), Expect = 6.6e-34, Sum P(4) = 6.6e-34
Identities = 28/105 (26%), Positives = 54/105 (51%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
+D + +W + F GH+G V+++ F+ ++L SGS D V VWD++ + +
Sbjct: 79 SDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFN--RLGNILVSGSKDTEVIVWDIITESGL 136
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
L H ++TS+ + + LI++ +D + +WD C T+
Sbjct: 137 FRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTI 181
Score = 126 (49.4 bits), Expect = 8.3e-15, Sum P(4) = 8.3e-15
Identities = 27/123 (21%), Positives = 60/123 (48%)
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
++ S + GH+ I S+ S DQ++++ S + ++K+W++ SC+++ L
Sbjct: 385 EVSSTLDQAGHRSDIRSLSLSSNDQMLVSTSSE-SVKVWNMKSLSCIRSIACDYG--LCT 441
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 530
F ++ G ++++ + + +A+ HE +W+L + +GG+D LV
Sbjct: 442 VFAPGNLHVIVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLV 501
Query: 531 NLW 533
W
Sbjct: 502 KFW 504
Score = 125 (49.1 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 40/141 (28%), Positives = 72/141 (51%)
Query: 377 AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQV 436
A H DI SL+++ ND ++ + S + VW + L S + G+ +V F+P +
Sbjct: 393 AGHRSDIRSLSLSSNDQMLVSTSSESVK-VWNMKSL-SCIRSIACDYGLCTV-FAPGNLH 449
Query: 437 VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ-IVSCGADGLVKLWTVRT 495
VI + TI+++ ++ + + + + H SV + LT + + S GAD LVK W
Sbjct: 450 VIVGTKTGTIEVFELASAARVASIKAHEGSVW-SLVLTPDLRGVTSGGADKLVKFWDF-- 506
Query: 496 GECIATYDKHEDKIWALAVGK 516
E IA+ + + K+ L++ K
Sbjct: 507 -ELIASQENSKHKVLNLSLTK 526
Score = 125 (49.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 36/146 (24%), Positives = 65/146 (44%)
Query: 394 LVCTGSQDRTACVWRL-PDLVSVVTFRGH-KRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
L TG +R + +W L +++ + K + +V S ++ + D +I+IWS+
Sbjct: 30 LAITGCGERIS-IWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSM 88
Query: 452 SDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWA 511
SD F GH SV +F G +VS D V +W + T + H D+I +
Sbjct: 89 SDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITS 148
Query: 512 LAVGKKTEMFATGGSDALVNLWHDST 537
+ + +++ T D + +W T
Sbjct: 149 VKLLERSNHLITSSKDGFIKIWDTET 174
Score = 124 (48.7 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD+ + +W +D G C F H + + F P T + S S D ++ WD + +
Sbjct: 593 ADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFI--SASKDKRIKYWDADKFEHI 650
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
T++ H V S+A+ S G IS D+ + +++
Sbjct: 651 QTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFN 685
Score = 121 (47.7 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 46/211 (21%), Positives = 91/211 (43%)
Query: 263 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 322
+V V+D+ + S + L GH + + + S+ ++T SKD +++WD+E++ C+
Sbjct: 124 EVIVWDIITESGLFRLRGHRDQITSVKLLERSNH---LITSSKDGFIKIWDTETQHCIQT 180
Query: 323 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 382
GH + + + + L S +SD+ I+ W E ++ K +V
Sbjct: 181 IVGHRNPIWGIDVNPD-ETRLCSCTSDNQIRFWRIPSNERQREDGSGIEPKFIV---NTP 236
Query: 383 INSLAVAPNDSLVCTGSQDRTACVWR---LPDL--VSVVTFRGH-------KRGIWSVEF 430
INS + P D + GS+ + + DL +S F + + V F
Sbjct: 237 INSAVIIP-DEINEDGSKKENSNNSNNNDIDDLEIISEEEFAKYYGSITVKAESVSGVRF 295
Query: 431 SPVDQVVITASGDKTIKIWSISDGSCLKTFE 461
P ++++ S K + ++ I+ +K E
Sbjct: 296 DPTNKILAVQSTGKFVDLFKITHYDTMKLEE 326
Score = 113 (44.8 bits), Expect = 4.2e-32, Sum P(5) = 4.2e-32
Identities = 26/101 (25%), Positives = 48/101 (47%)
Query: 5 LEGADRKVLVWDVDGGFCTH--YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
+ G ++ +WD+ Y + K V+++ D +LL SG D ++R+W +
Sbjct: 32 ITGCGERISIWDLRKQVLNQSLYEEDIKAEVTNVCL--SKDGALLASGYSDGSIRIWSMS 89
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+ A + H VT+M G+ L+S +D V +WD+
Sbjct: 90 DYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDI 130
Score = 109 (43.4 bits), Expect = 4.9e-31, Sum P(4) = 4.9e-31
Identities = 23/99 (23%), Positives = 48/99 (48%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+ D +V+VWD+ +GH+ ++S+ ++ L + S D +++WD
Sbjct: 116 LVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNH--LITSSKDGFIKIWDTE 173
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
+ C+ T+ H + + + + D + L S D + W
Sbjct: 174 TQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFW 212
Score = 80 (33.2 bits), Expect = 8.3e-15, Sum P(4) = 8.3e-15
Identities = 17/79 (21%), Positives = 39/79 (49%)
Query: 234 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
RL G+ ++I +K L E +L ++ ++++D + C + GH + +D +
Sbjct: 138 RLRGHRDQITSVKLL-ERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGID---V 193
Query: 294 SSGKILIVTGSKDNSVRLW 312
+ + + + + DN +R W
Sbjct: 194 NPDETRLCSCTSDNQIRFW 212
Score = 72 (30.4 bits), Expect = 6.0e-28, Sum P(5) = 6.0e-28
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 31 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHF--SRVTSMAITSDGST 88
G++S+ D L +G + + +WDL + +L + + VT++ ++ DG+
Sbjct: 15 GLISTSNSILDGSGKLAITGCGER-ISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGAL 73
Query: 89 LISAGRDKVVNLWDLRDY 106
L S D + +W + DY
Sbjct: 74 LASGYSDGSIRIWSMSDY 91
Score = 49 (22.3 bits), Expect = 6.6e-34, Sum P(4) = 6.6e-34
Identities = 32/134 (23%), Positives = 55/134 (41%)
Query: 586 LFASVCRKREAELQIEKALHALGKEEIRQLLEYVREW-NTKPKLCHVAQFVLFQLFNIHP 644
L+ + R R ++L E+AL L +R L EY W + K F L H
Sbjct: 789 LWNRINRIRPSDL--EEALRVLPFSVMRTLFEYFNLWVDQSGKSVEFIFKCSFFLIQTHQ 846
Query: 645 PTEIIEIKGISDVLEGLIPYTQRHFSRI-DRLVRSTFLLDYTLTGMSVIEPDTEAREVKA 703
+S E IP Q + I +RL + F L + + +S ++ + E +
Sbjct: 847 -------NQLSVSTE-FIPILQHLNTSIKNRLQKERFTLGFNRSALSFVKREIEINQ--Q 896
Query: 704 ESLVDSNVHQDAND 717
DS+++ + N+
Sbjct: 897 YKFFDSDLYLNKNN 910
Score = 44 (20.5 bits), Expect = 4.2e-32, Sum P(5) = 4.2e-32
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 134 LSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CL 172
L + Q K H IT + G +++W+ ++ C+
Sbjct: 139 LRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCI 178
Score = 39 (18.8 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 152 HFITVGERGIVRMWNAD 168
HFI+ + ++ W+AD
Sbjct: 629 HFISASKDKRIKYWDAD 645
Score = 37 (18.1 bits), Expect = 6.6e-34, Sum P(4) = 6.6e-34
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 239 NEEILDLKFLGEEE---QYLAVATNIEQV 264
N +I DL+ + EEE Y ++ E V
Sbjct: 262 NNDIDDLEIISEEEFAKYYGSITVKAESV 290
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 334 (122.6 bits), Expect = 5.5e-33, Sum P(2) = 5.5e-33
Identities = 78/299 (26%), Positives = 144/299 (48%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ + + F +A + + +++ + + C + GH+ ++CL + +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCL---SFN 186
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
L+ TGS D + +LWD +S V TGH + +++F+ N +++GS DHT+ V
Sbjct: 187 PQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTS-GNRIITGSFDHTVTV 245
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 414
W D K ++ H +I+S + SL+ TGS D+T +W +
Sbjct: 246 WEAD---------TGRKVYTLIG-HCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKC 295
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 474
V T GH I F +++ TAS D T +I+S + C+ EGH + + SF
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNP 355
Query: 475 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+G ++++ +D ++W +TG+C+ + H D+I++ A K ++ TG D +W
Sbjct: 356 QGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 299 (110.3 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 76/273 (27%), Positives = 121/273 (44%)
Query: 265 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 324
+++D +S + L GH +V + KI TGS D + +LW E+ C
Sbjct: 117 KLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI--ATGSFDKTCKLWSVETGKCYHTFR 174
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH + ++F+ + + +GS D T K+W E+ L H +I
Sbjct: 175 GHTAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQS----GEEVFTL------TGHSAEII 223
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
SL+ + + + TGS D T VW V T GH I S F+ +++T S DK
Sbjct: 224 SLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDK 283
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
T K+W +G C+ T GH +L + F G I + ADG ++++ T EC+ +
Sbjct: 284 TCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEG 343
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
HE +I ++ + TG SD +W T
Sbjct: 344 HEGEISKISFNPQGNRLLTGSSDKTARIWDAQT 376
Score = 288 (106.4 bits), Expect = 5.5e-23, P = 5.5e-23
Identities = 77/261 (29%), Positives = 117/261 (44%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
VL H +L L AL+ +TGS D + +LWD+ S + GH V A+AF+
Sbjct: 87 VLRAH---ILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
+ + +GS D T K+WS + K H +I L+ P +LV
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVE----------TGKCYHTFRGHTAEIVCLSFNPQSTLVA 193
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
TGS D TA +W + V T GH I S+ F+ +IT S D T+ +W G
Sbjct: 194 TGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRK 253
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 516
+ T GH + + A F + I++ D KLW G+C+AT H+D+I
Sbjct: 254 VYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDY 313
Query: 517 KTEMFATGGSDALVNLWHDST 537
++ AT +D ++ +T
Sbjct: 314 TGKLIATASADGTARIFSAAT 334
Score = 203 (76.5 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 74/314 (23%), Positives = 142/314 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFH-PDTDKSLLFSGSDDATVRVWDLLAKKCV 67
DR +WD G H +GH+ VV +I F+ P DK + +GS D T ++W + KC
Sbjct: 113 DRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDK--IATGSFDKTCKLWSVETGKCY 170
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGR-DKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 126
T H + + ++ STL++ G D LWD++ T+ T E +
Sbjct: 171 HTFRGHTAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQSGEEVFTL-TGHSAEIISLSFN 228
Query: 127 GSAFDSFLSSYNQQ-TIKKKRRSLEIHFITVGERGIVR--MWNADSACLYEQKSSDVTIS 183
S S++ T+ + +++ + +G + ++N D + + S D T
Sbjct: 229 TSGNRIITGSFDHTVTVWEADTGRKVYTL-IGHCAEISSAVFNWDCSLILTG-SMDKTC- 285
Query: 184 FEMDDSKRGFTAATVLPSNQGLL--CVTADQQLLLYTTVEVPEKKMELILSK---RLVGY 238
++ D+ G AT+ + +L C +L+ + + + + +L G+
Sbjct: 286 -KLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGH 344
Query: 239 NEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI 298
EI + F + + L +++ + +++D + C VL GH++ + +CA +
Sbjct: 345 EGEISKISFNPQGNRLLTGSSD-KTARIWDAQTGQCLQVLEGHTDEIF---SCAFNYKGD 400
Query: 299 LIVTGSKDNSVRLW 312
+I+TGSKDN+ R+W
Sbjct: 401 IIITGSKDNTCRIW 414
Score = 195 (73.7 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 75/317 (23%), Positives = 140/317 (44%)
Query: 45 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR-DKVVNLWDL 103
S +GS D T ++WD + + + TL+ H + V ++A + I+ G DK LW +
Sbjct: 105 SCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSV 164
Query: 104 RDYSCKLTVPTYEMVEAVC-AIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIV 162
C T + E VC + P S + S + + E+ +T I+
Sbjct: 165 ETGKCYHTFRGHT-AEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEII 223
Query: 163 RMWNADSACLYEQKSSDVTIS-FEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVE 221
+ S S D T++ +E D ++ +T + D L+L +++
Sbjct: 224 SLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAV-FNWDCSLILTGSMD 282
Query: 222 VPEKKMELILSK---RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVL 278
K + + K L G+++EILD F + +A A+ +++ ++ C L
Sbjct: 283 KTCKLWDAVNGKCVATLTGHDDEILDSCF-DYTGKLIATASADGTARIFSAATRECVTKL 341
Query: 279 AGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKK 338
GH + + G L+ TGS D + R+WD+++ C+ V GH + + AF+ K
Sbjct: 342 EGHEGEISKISFNP--QGNRLL-TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYK 398
Query: 339 LQNFLVSGSSDHTIKVW 355
+ +++GS D+T ++W
Sbjct: 399 -GDIIITGSKDNTCRIW 414
Score = 177 (67.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 52/174 (29%), Positives = 88/174 (50%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L+G+ EI F + L + + + +++D + C L GH + +L D+C
Sbjct: 257 LIGHCAEISSAVFNWDCSLILTGSMD-KTCKLWDAVNGKCVATLTGHDDEIL--DSCFDY 313
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
+GK LI T S D + R++ + +R CV GH G + ++F+ + N L++GSSD T ++
Sbjct: 314 TGK-LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQ-GNRLLTGSSDKTARI 371
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR 408
W DA+ L+ V+ H +I S A ++ TGS+D T +WR
Sbjct: 372 W-------DAQTGQCLQ---VLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ D V VW+ D G + GH +SS +F+ D SL+ +GS D T ++WD +
Sbjct: 234 IITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDC--SLILTGSMDKTCKLWDAV 291
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAV 121
KCVATL H + G + +A D ++ C + +E + +
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKI 351
Query: 122 CAIPPGS 128
P G+
Sbjct: 352 SFNPQGN 358
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 27/106 (25%), Positives = 48/106 (45%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
+L G+ D+ +WD G C GH + F D L+ + S D T R++
Sbjct: 276 ILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCF--DYTGKLIATASADGTARIFSAA 333
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
++CV L+ H ++ ++ G+ L++ DK +WD + C
Sbjct: 334 TRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQC 379
Score = 59 (25.8 bits), Expect = 5.5e-33, Sum P(2) = 5.5e-33
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H +T++A+ GS I+ D+ LWD
Sbjct: 88 LRAHILPLTNVALNKSGSCFITGSYDRTCKLWD 120
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 305 (112.4 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 79/310 (25%), Positives = 144/310 (46%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G ++ + + ++ + LA A+N ++++++ + C E L TC
Sbjct: 387 LQGQRTDVRSID-ISDDNKLLATASN-GSLKIWNIKTHKCIRTF----ECGYAL-TCKFL 439
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVG-VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
G +L++ G+++ ++L+D S + + H A+ ++ + + LV+GS+D T+K
Sbjct: 440 PGGLLVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKR-LVTGSADKTVK 498
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGK-------DINSLAVAPNDSLVCTGSQDRTACV 406
W F + N K V+ H DI + V+P+D + D T V
Sbjct: 499 FWDFKVENSLVPGTKN-KFLPVLKLHHDTTLELTDDILCVRVSPDDRYLAISLLDNTVKV 557
Query: 407 WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 466
+ L + ++ GHK + S++ S +++IT+S DK IKIW + G C K+ H S
Sbjct: 558 FFLDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDS 617
Query: 467 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 526
++ FL + SC D +VK W ECI H+ ++WALAV +
Sbjct: 618 IMNVKFLPQSHNFFSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSH 677
Query: 527 DALVNLWHDS 536
D + +W ++
Sbjct: 678 DHSIRIWEET 687
Score = 198 (74.8 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 67/235 (28%), Positives = 103/235 (43%)
Query: 394 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
L+ G D VW L ++ F GHK I ++F +I+ S D I +W +
Sbjct: 93 LLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDLVG 152
Query: 454 GSCLKTFEGHTSSVLRASFLTRGAQ-IVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
L H S+ F +G ++S DG++KLW ++T +CI T+ H + W L
Sbjct: 153 EVGLYKLRSHKDSI--TGFWCQGEDWLISTSKDGMIKLWDLKTHQCIETHIAHTGECWGL 210
Query: 513 AVGKKTEMFATGGSDALVNLW-----HDSTXXXXXXXXXXXXXXVLRGQELENAVLDADY 567
AV K ++ T G+D+ V +W +D RG ++E +D
Sbjct: 211 AV--KDDLLITTGTDSQVKIWKLDIENDKMGGKLTEMGIFEKQSKQRGLKIEFITNSSDK 268
Query: 568 TKA--IQVA---FELRRPHKLFELFASVCRKREAELQIEKALHALGKEEIRQLLE 617
T IQ A E R K E+ A +KRE L+ EK L +EEI + ++
Sbjct: 269 TSFFYIQNADKTIETFRIRKEEEI-ARGLKKREKRLK-EKGLT---EEEIAKSIK 318
Score = 148 (57.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 4 LLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 63
+ AD+ + +W +D G C H+ + ++ F P + FS S DA V+ WD
Sbjct: 589 ITSSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHN--FFSCSKDAVVKYWDGEK 646
Query: 64 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
+C+ L H S V ++A+ +DG ++S+ D + +W+
Sbjct: 647 FECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWE 685
Score = 143 (55.4 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 63/260 (24%), Positives = 110/260 (42%)
Query: 257 VATNIEQVQVYDLSSMSCSYVLA-GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE 315
+ T ++Q++DL+S S + H + LD S GK L VTGS D +V+ WD +
Sbjct: 447 LGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLT--SDGKRL-VTGSADKTVKFWDFK 503
Query: 316 SRCCVGVGTGHMGA-VGAVAFSKKLQ---NFL-VSGSSDHTIKVWSFDGLSDDAEQPMNL 370
+ GT + V + L+ + L V S D S L D+ + L
Sbjct: 504 VENSLVPGTKNKFLPVLKLHHDTTLELTDDILCVRVSPDDRYLAIS---LLDNTVKVFFL 560
Query: 371 KA-KAVVAAHGKDINSLAVAPN-DS-LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWS 427
+ K ++ +G + L++ + DS ++ T S D+ +W L + H+ I +
Sbjct: 561 DSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMN 620
Query: 428 VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGL 487
V+F P + S D +K W C++ H S V + T G +VS D
Sbjct: 621 VKFLPQSHNFFSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHS 680
Query: 488 VKLWTVRTGECIATYDKHED 507
+++W + +K ++
Sbjct: 681 IRIWEETEDQVFLEEEKEKE 700
Score = 140 (54.3 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + VWD+ F GHK ++ + F D + L SGS D+ + VWDL+ + +
Sbjct: 99 ADGVIKVWDLMSKTVLLNFNGHKAAITLLQF--DGTGTRLISGSKDSNIIVWDLVGEVGL 156
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
L H +T + LIS +D ++ LWDL+ + C
Sbjct: 157 YKLRSHKDSITGFWCQGE-DWLISTSKDGMIKLWDLKTHQC 196
Score = 137 (53.3 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 475
+ +G + + S++ S ++++ TAS ++KIW+I C++TFE L FL
Sbjct: 385 IELQGQRTDVRSIDISDDNKLLATASNG-SLKIWNIKTHKCIRTFE--CGYALTCKFLPG 441
Query: 476 GAQIVSCGADGLVKLWTVRTGECIATY-DKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
G ++ +G ++L+ + + + T D H+ IW+L + + TG +D V W
Sbjct: 442 GLLVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFW 500
Score = 123 (48.4 bits), Expect = 0.00090, P = 0.00090
Identities = 53/208 (25%), Positives = 82/208 (39%)
Query: 295 SGKILIVTGSKDNSVRLWDSE-----SRCCVGVGTGHMGAVGAVAF------SKKLQNFL 343
SG ++T + ++ V +WD + S+ G+ G A GA + K + L
Sbjct: 36 SGPGQLITSALED-VNIWDIKTGDLVSKLSDGLPPGASDARGAKPAECTYLEAHKDTDLL 94
Query: 344 VSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRT 403
G +D IKVW D +S N H I L + + +GS+D
Sbjct: 95 AVGYADGVIKVW--DLMSKTVLLNFN--------GHKAAITLLQFDGTGTRLISGSKDSN 144
Query: 404 ACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGH 463
VW L V + R HK I D ++ T S D IK+W + C++T H
Sbjct: 145 IIVWDLVGEVGLYKLRSHKDSITGFWCQGEDWLIST-SKDGMIKLWDLKTHQCIETHIAH 203
Query: 464 TSSVLRASFLTRGAQIVSCGADGLVKLW 491
T + +++ G D VK+W
Sbjct: 204 TGECW--GLAVKDDLLITTGTDSQVKIW 229
Score = 120 (47.3 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 28/101 (27%), Positives = 47/101 (46%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+ D ++VWD+ G + + HK ++ + L S S D +++WDL
Sbjct: 136 LISGSKDSNIIVWDLVGEVGLYKLRSHKDSITGFWCQGE---DWLISTSKDGMIKLWDLK 192
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+C+ T H +A+ D LI+ G D V +W L
Sbjct: 193 THQCIETHIAHTGECWGLAVKDD--LLITTGTDSQVKIWKL 231
Score = 115 (45.5 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 39 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 98
H DTD LL G D ++VWDL++K + + H + +T + G+ LIS +D +
Sbjct: 88 HKDTD--LLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNI 145
Query: 99 NLWDL 103
+WDL
Sbjct: 146 IVWDL 150
Score = 103 (41.3 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 296
G+ I L+F G + ++ + + + V+DL Y L H + + T G
Sbjct: 119 GHKAAITLLQFDGTGTRLISGSKD-SNIIVWDLVGEVGLYKLRSHKDSI----TGFWCQG 173
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
+ +++ SKD ++LWD ++ C+ H G +A L L++ +D +K+W
Sbjct: 174 EDWLISTSKDGMIKLWDLKTHQCIETHIAHTGECWGLAVKDDL---LITTGTDSQVKIWK 230
Query: 357 FD 358
D
Sbjct: 231 LD 232
Score = 101 (40.6 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 25/102 (24%), Positives = 50/102 (49%)
Query: 4 LLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 63
L ++ + +W++ C F+ G + F P L+ G+ + ++++DL +
Sbjct: 406 LATASNGSLKIWNIKTHKCIRTFEC--GYALTCKFLPGG--LLVILGTRNGELQLFDLAS 461
Query: 64 KKCVATL-DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+ T+ D H + + S+ +TSDG L++ DK V WD +
Sbjct: 462 SSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFWDFK 503
Score = 84 (34.6 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K L + + I+++KFL + + + + + V+ +D C L H V L A
Sbjct: 609 KSLFAHQDSIMNVKFLPQSHNFFSCSKDAV-VKYWDGEKFECIQKLYAHQSEVWAL-AVA 666
Query: 293 LSSGKILIVTGSKDNSVRLWD 313
G +V+ S D+S+R+W+
Sbjct: 667 TDGG--FVVSSSHDHSIRIWE 685
Score = 78 (32.5 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 38/163 (23%), Positives = 73/163 (44%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+++GSKD+++ +WD + H ++ F + +++L+S S D IK+W
Sbjct: 136 LISGSKDSNIIVWDLVGEVGLYKLRSHKDSI--TGFWCQGEDWLISTSKDGMIKLW---- 189
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
D + ++ AH + LAV +D L+ TG+ D +W+L + +
Sbjct: 190 ---DLKTHQCIETHI---AHTGECWGLAVK-DDLLITTGT-DSQVKIWKLDIENDKMGGK 241
Query: 420 GHKRGIWSVEFSPVDQVV--ITASGDKTIKIWSISDGSCLKTF 460
+ GI+ + + IT S DKT + + ++TF
Sbjct: 242 LTEMGIFEKQSKQRGLKIEFITNSSDKTSFFYIQNADKTIETF 284
Score = 59 (25.8 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 15/71 (21%), Positives = 37/71 (52%)
Query: 42 TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
+D + L + + + ++++W++ KC+ T + ++ +T + G +I R+ + L+
Sbjct: 400 SDDNKLLATASNGSLKIWNIKTHKCIRTFECGYA-LTCKFLPG-GLLVILGTRNGELQLF 457
Query: 102 DLRDYSCKLTV 112
DL S T+
Sbjct: 458 DLASSSLLDTI 468
Score = 37 (18.1 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 19/91 (20%), Positives = 37/91 (40%)
Query: 7 GADRKVLVWDVD------GGFCTH---YFKGHK--GVVSSILFHPDTDKSLLFSGSDDAT 55
G D +V +W +D GG T + K K G+ + + S + + D T
Sbjct: 221 GTDSQVKIWKLDIENDKMGGKLTEMGIFEKQSKQRGLKIEFITNSSDKTSFFYIQNADKT 280
Query: 56 VRVWDLLAKKCVAT-LDKHFSRVTSMAITSD 85
+ + + ++ +A L K R+ +T +
Sbjct: 281 IETFRIRKEEEIARGLKKREKRLKEKGLTEE 311
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 302 (111.4 bits), Expect = 9.6e-33, Sum P(2) = 9.6e-33
Identities = 77/281 (27%), Positives = 137/281 (48%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 314
LA ++ ++++D S C Y ++GH+ V C+ G+ L+ +GS D +VR+WD
Sbjct: 251 LASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKW----GGQGLLYSGSHDRTVRVWDI 306
Query: 315 ESRC-CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 373
S+ C+ + H V N L S S+D+ +++ +FD P + K
Sbjct: 307 NSQGRCINILKSHAHWV----------NHL-SLSTDYALRIGAFDHTGKKPSTPEEAQKK 355
Query: 374 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR-LPDLVSVVTFRGHKRGIWSVEFSP 432
A+ + K ++ ++ T S D T +W L + GH++ + V FSP
Sbjct: 356 AL-ENYEKICKKNG--NSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSP 412
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+ +++AS D +IK+W DG + TF GH +SV + ++ + +VSC D +K+W
Sbjct: 413 DGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWD 472
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
VRT + H+D+++ + + +GG D +V LW
Sbjct: 473 VRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 209 (78.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 102/399 (25%), Positives = 165/399 (41%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH + F P T S + +G+ D T R+WD + + TL H++ V ++ + DG
Sbjct: 141 GHGSTILCSAFAPHTS-SRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGE 199
Query: 88 TLISAGRDKVVNLWD----------LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSY 137
+ + D + LWD LR +S +T ++E + V PGS SS
Sbjct: 200 VIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLV---KPGSK-PRLASSS 255
Query: 138 NQQTIKK-KRRSLEIHFITVGERGIVRM--WNADSACLYEQKSSDVTISFEMDDSKRGFT 194
TIK S + G V W LY S D T+ D + +G
Sbjct: 256 KDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGL-LYSG-SHDRTVRV-WDINSQG-R 311
Query: 195 AATVLPSNQ---GLLCVTADQQLLLYTTVEVPEKKM--ELILSKRLVGYNEEILDLKFLG 249
+L S+ L ++ D L + +K E K L Y E+I K G
Sbjct: 312 CINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENY-EKIC--KKNG 368
Query: 250 EEEQYLAVATNIEQVQVYD-LSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
E+ + A++ + +++ L S + GH ++V + A S IV+ S DNS
Sbjct: 369 NSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLV---NHVAFSPDGRYIVSASFDNS 425
Query: 309 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 368
++LWD + GH+ +V VA+S + LVS S D T+KVW D
Sbjct: 426 IKLWDGRDGKFISTFRGHVASVYQVAWSSDCR-LLVSCSKDTTLKVW-------DVR--- 474
Query: 369 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
K + H ++ ++ + + VC+G +D+ +W
Sbjct: 475 TRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 193 (73.0 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 371 KAKAVVAAHGKDINSLAVAPN-DSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
++ + +A HG I A AP+ S + TG+ D TA +W + T +GH + V
Sbjct: 134 RSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVS 193
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCL-KTFEGHTSSVLRASF----LTR-GAQ--IVS 481
+SP +V+ T S D TI++W G CL GH+ + S+ L + G++ + S
Sbjct: 194 WSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLAS 253
Query: 482 CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
DG +K+W + C T H + + + G + +++ G D V +W
Sbjct: 254 SSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLYS-GSHDRTVRVW 304
Score = 185 (70.2 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 66/262 (25%), Positives = 114/262 (43%)
Query: 275 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 334
S +AGH +LC +S ++ VTG+ DN+ R+WD +++ + GH V V+
Sbjct: 136 SSAIAGHGSTILCSAFAPHTSSRM--VTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVS 193
Query: 335 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDA-EQPMNLKAKAVVAAHGKDINSLAVAPNDS 393
+S + + +GS D+TI++W D S + +K + + + I+ +
Sbjct: 194 WSPDGE-VIATGSMDNTIRLW--DPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPR 250
Query: 394 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI-S 452
L + S+D T +W V T GH + V++ ++ + S D+T+++W I S
Sbjct: 251 LA-SSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGG-QGLLYSGSHDRTVRVWDINS 308
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
G C+ + H V S T A + K T + A + +E KI
Sbjct: 309 QGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKAL-ENYE-KI-CK 365
Query: 513 AVGKKTEMFATGGSDALVNLWH 534
G EM T D + LW+
Sbjct: 366 KNGNSEEMMVTASDDYTMFLWN 387
Score = 171 (65.3 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 40/154 (25%), Positives = 75/154 (48%)
Query: 340 QNFLVSGSSDHTIKVWSFDGLSDDAEQPM-NLKAKAVVAAHGKDINSLAVAPNDSLVCTG 398
+ +V+ S D+T+ +W+ P+ + K A + H K +N +A +P+ + +
Sbjct: 371 EEMMVTASDDYTMFLWN----------PLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSA 420
Query: 399 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
S D + +W D + TFRGH ++ V +S +++++ S D T+K+W +
Sbjct: 421 SFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSV 480
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
GH V + G ++ S G D +V+LWT
Sbjct: 481 DLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLWT 514
Score = 139 (54.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 33/94 (35%), Positives = 50/94 (53%)
Query: 9 DRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
D + +WD DG F + F+GH V + + +D LL S S D T++VWD+ +K
Sbjct: 423 DNSIKLWDGRDGKFIST-FRGHVASVYQVAW--SSDCRLLVSCSKDTTLKVWDVRTRKLS 479
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
L H V ++ + DG + S G+DK+V LW
Sbjct: 480 VDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 128 (50.1 bits), Expect = 9.6e-33, Sum P(2) = 9.6e-33
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ GA D +WD D H KGH V + + PD + ++ +GS D T+R+WD
Sbjct: 159 MVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGE--VIATGSMDNTIRLWDPK 216
Query: 63 AKKCVA-TLDKHFSRVTSMA-----ITSDGST--LISAGRDKVVNLWDLRDYSCKLTV 112
+ +C+ L H +TS++ + GS L S+ +D + +WD C+ T+
Sbjct: 217 SGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTM 274
Score = 122 (48.0 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK-KCV 67
D + +WD C + GH VS + + + LL+SGS D TVRVWD+ ++ +C+
Sbjct: 257 DGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG---GQGLLYSGSHDRTVRVWDINSQGRCI 313
Query: 68 ATLDKHFSRVTSMAITSDGSTLISA 92
L H V +++++D + I A
Sbjct: 314 NILKSHAHWVNHLSLSTDYALRIGA 338
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 323 (118.8 bits), Expect = 6.8e-32, Sum P(2) = 6.8e-32
Identities = 76/299 (25%), Positives = 144/299 (48%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ + + F +A + + +++ + + C + GH+ ++CL + +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCL---SFN 186
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
L+ TGS D + +LWD ++ V GH + +++F+ +++GS DHT+ V
Sbjct: 187 PQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDR-IITGSFDHTVVV 245
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 414
W D D + +N ++ H +I+S + + SL+ TGS D+T +W +
Sbjct: 246 W--DA---DTGRKVN-----ILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKC 295
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 474
V T GH I F +++ TAS D T +I+S + C+ EGH + + SF
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNP 355
Query: 475 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+G +++ +D ++W +TG+C+ + H D+I++ A K + TG D +W
Sbjct: 356 QGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 300 (110.7 bits), Expect = 9.4e-25, P = 9.4e-25
Identities = 78/261 (29%), Positives = 119/261 (45%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
VL H +L L AL+ +TGS D + +LWD+ S + GH V A+AF+
Sbjct: 87 VLKAH---ILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFN 143
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
+ + +GS D T K+WS + K H +I L+ P +LV
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVE----------TGKCYHTFRGHTAEIVCLSFNPQSTLVA 193
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
TGS D TA +W + + V T RGH I S+ F+ +IT S D T+ +W G
Sbjct: 194 TGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRK 253
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 516
+ GH + + ASF + I++ D KLW G+C+AT H+D+I
Sbjct: 254 VNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDY 313
Query: 517 KTEMFATGGSDALVNLWHDST 537
++ AT +D ++ +T
Sbjct: 314 TGKLIATASADGTARIFSAAT 334
Score = 291 (107.5 bits), Expect = 7.4e-26, Sum P(2) = 7.4e-26
Identities = 76/273 (27%), Positives = 122/273 (44%)
Query: 265 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 324
+++D +S L GH +V + KI TGS D + +LW E+ C
Sbjct: 117 KLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKI--ATGSFDKTCKLWSVETGKCYHTFR 174
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH + ++F+ + + +GS D T K+W + E+ L+ H +I
Sbjct: 175 GHTAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQ----NGEEVYTLRG------HSAEII 223
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
SL+ + + TGS D T VW V GH I S F+ +++T S DK
Sbjct: 224 SLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDK 283
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
T K+W ++G C+ T GH +L + F G I + ADG ++++ T +CIA +
Sbjct: 284 TCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEG 343
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
HE +I ++ + TG SD +W T
Sbjct: 344 HEGEISKISFNPQGNHLLTGSSDKTARIWDAQT 376
Score = 201 (75.8 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 71/313 (22%), Positives = 141/313 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFH-PDTDKSLLFSGSDDATVRVWDLLAKKCV 67
DR +WD G + +GH+ VV +I F+ P DK + +GS D T ++W + KC
Sbjct: 113 DRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDK--IATGSFDKTCKLWSVETGKCY 170
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGR-DKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 126
T H + + ++ STL++ G D LWD+++ T+ + + ++
Sbjct: 171 HTFRGHTAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQNGEEVYTLRGHSA--EIISLSF 227
Query: 127 GSAFDSFLS-SYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSAC-LYEQKSSDVTISF 184
++ D ++ S++ + + I +G + + + C L S D T
Sbjct: 228 NTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTC-- 285
Query: 185 EMDDSKRGFTAATVLPSNQGLL--CVTADQQLLLYTTVEVPEKKMELILSK---RLVGYN 239
++ D+ G AT+ + +L C +L+ + + + K +L G+
Sbjct: 286 KLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHE 345
Query: 240 EEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKIL 299
EI + F + +L ++ + +++D + C VL GH++ + +CA + +
Sbjct: 346 GEISKISF-NPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIF---SCAFNYKGNI 401
Query: 300 IVTGSKDNSVRLW 312
++TGSKDN+ R+W
Sbjct: 402 VITGSKDNTCRIW 414
Score = 188 (71.2 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 52/174 (29%), Positives = 90/174 (51%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L+G+ EI F + L + + + +++D ++ C L GH + +L D+C
Sbjct: 257 LIGHCAEISSASFNWDCSLILTGSMD-KTCKLWDATNGKCVATLTGHDDEIL--DSCFDY 313
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
+GK LI T S D + R++ + +R C+ GH G + ++F+ + N L++GSSD T ++
Sbjct: 314 TGK-LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQ-GNHLLTGSSDKTARI 371
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR 408
W DA+ L+ V+ H +I S A ++V TGS+D T +WR
Sbjct: 372 W-------DAQTGQCLQ---VLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIWR 415
Score = 182 (69.1 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 71/320 (22%), Positives = 139/320 (43%)
Query: 45 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR-DKVVNLWDL 103
S +GS D T ++WD + + + TL+ H + V ++A + I+ G DK LW +
Sbjct: 105 SCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSV 164
Query: 104 RDYSCKLTVPTYEMVEAVC-AIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIV 162
C T + E VC + P S + S + + E++ + I+
Sbjct: 165 ETGKCYHTFRGHT-AEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEII 223
Query: 163 RM-WNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTA---DQQLLLYT 218
+ +N + + ++ D ++ +L + + + D L+L
Sbjct: 224 SLSFNTSGDRIITGSFDHTVVVWDADTGRK----VNILIGHCAEISSASFNWDCSLILTG 279
Query: 219 TVEVPEKKMELILSK---RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCS 275
+++ K + K L G+++EILD F + +A A+ +++ ++ C
Sbjct: 280 SMDKTCKLWDATNGKCVATLTGHDDEILDSCF-DYTGKLIATASADGTARIFSAATRKCI 338
Query: 276 YVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 335
L GH + + G L+ TGS D + R+WD+++ C+ V GH + + AF
Sbjct: 339 AKLEGHEGEISKISFNP--QGNHLL-TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAF 395
Query: 336 SKKLQNFLVSGSSDHTIKVW 355
+ K N +++GS D+T ++W
Sbjct: 396 NYK-GNIVITGSKDNTCRIW 414
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 28/106 (26%), Positives = 49/106 (46%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
+L G+ D+ +WD G C GH + F D L+ + S D T R++
Sbjct: 276 ILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCF--DYTGKLIATASADGTARIFSAA 333
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+KC+A L+ H ++ ++ G+ L++ DK +WD + C
Sbjct: 334 TRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQC 379
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 36/127 (28%), Positives = 57/127 (44%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ D V+VWD D G + GH +SS F+ D SL+ +GS D T ++WD
Sbjct: 234 IITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDC--SLILTGSMDKTCKLWDAT 291
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAV 121
KCVATL H + G + +A D ++ C + +E + +
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKI 351
Query: 122 CAIPPGS 128
P G+
Sbjct: 352 SFNPQGN 358
Score = 60 (26.2 bits), Expect = 6.8e-32, Sum P(2) = 6.8e-32
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H +T++A+ GS I+ D+ LWD
Sbjct: 88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLWD 120
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 327 (120.2 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 76/299 (25%), Positives = 143/299 (47%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ + + F +A + + +++ + C + GH+ ++CL + +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCL---SFN 186
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
++ TGS D + +LWD +S V TGH+ + +++F +++GS DHT+ V
Sbjct: 187 PQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDR-IITGSFDHTVVV 245
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 414
W DA K ++ H +I+S + + SL+ TGS D+T +W
Sbjct: 246 W-------DAST--GRKVHTLIG-HCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKC 295
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 474
V T GH I F +++ TAS D T ++++ + C+ EGH + + SF
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNP 355
Query: 475 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+G ++++ +D ++W V+TG+C+ + H D+I++ A K + TG D +W
Sbjct: 356 QGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 290 (107.1 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 78/261 (29%), Positives = 120/261 (45%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
VL H +L L AL+ +TGS D + ++WD+ S + GH V A+AF+
Sbjct: 87 VLRAH---ILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
+ + +GS D T K+WS AE K H +I L+ P ++V
Sbjct: 144 NPYGDKIATGSFDKTCKLWS-------AETG---KCYHTFRGHTAEIVCLSFNPQSTVVA 193
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
TGS D TA +W + VVT GH I S+ F +IT S D T+ +W S G
Sbjct: 194 TGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRK 253
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 516
+ T GH + + A F + I++ D LW +G+C+AT H+D+I
Sbjct: 254 VHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDY 313
Query: 517 KTEMFATGGSDALVNLWHDST 537
++ AT +D +++ +T
Sbjct: 314 TGKLIATASADGTARVYNATT 334
Score = 289 (106.8 bits), Expect = 6.8e-25, Sum P(2) = 6.8e-25
Identities = 77/273 (28%), Positives = 120/273 (43%)
Query: 265 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 324
+V+D +S + L GH +V + KI TGS D + +LW +E+ C
Sbjct: 117 KVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI--ATGSFDKTCKLWSAETGKCYHTFR 174
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH + ++F+ + + +GS D T K+W E+ + L H +I
Sbjct: 175 GHTAEIVCLSFNPQ-STVVATGSMDTTAKLWDIQS----GEEVVTL------TGHLAEII 223
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
SL+ + + TGS D T VW V T GH I S FS +++T S DK
Sbjct: 224 SLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDK 283
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
T +W + G C+ T GH +L + F G I + ADG +++ T +CI +
Sbjct: 284 TCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEG 343
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
HE +I ++ + TG SD +W T
Sbjct: 344 HEGEISKISFNPQGNRLLTGSSDKTARIWDVQT 376
Score = 211 (79.3 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 72/314 (22%), Positives = 143/314 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFH-PDTDKSLLFSGSDDATVRVWDLLAKKCV 67
DR VWD G H +GH+ VV +I F+ P DK + +GS D T ++W KC
Sbjct: 113 DRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDK--IATGSFDKTCKLWSAETGKCY 170
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H + + ++ + + + D LWD++ +T+ T + E + ++
Sbjct: 171 HTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTL-TGHLAEII-SLSFD 228
Query: 128 SAFDSFLSSYNQQTIKKKRRSL--EIHFITVGERGIVR--MWNADSACLYEQKSSDVTIS 183
++ D ++ T+ S ++H + +G + +++ D + + S D T
Sbjct: 229 TSGDRIITGSFDHTVVVWDASTGRKVHTL-IGHCAEISSALFSWDCSLILTG-SMDKTCM 286
Query: 184 FEMDDSKRGFTAATVLPSNQGLL--CVTADQQLLLYTTVEVPEKKMELILSK---RLVGY 238
+ D+ G AT+ + +L C +L+ + + + K +L G+
Sbjct: 287 --LWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGH 344
Query: 239 NEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI 298
EI + F + + L +++ + +++D+ + C VL GH++ + +CA +
Sbjct: 345 EGEISKISFNPQGNRLLTGSSD-KTARIWDVQTGQCLQVLEGHTDEIF---SCAFNYKGN 400
Query: 299 LIVTGSKDNSVRLW 312
+++TGSKDNS R+W
Sbjct: 401 IVITGSKDNSCRIW 414
Score = 178 (67.7 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 51/174 (29%), Positives = 89/174 (51%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L+G+ EI F + L + + + ++D +S C L GH + +L D+C
Sbjct: 257 LIGHCAEISSALFSWDCSLILTGSMD-KTCMLWDATSGKCVATLTGHDDEIL--DSCFDY 313
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
+GK LI T S D + R++++ +R C+ GH G + ++F+ + N L++GSSD T ++
Sbjct: 314 TGK-LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQ-GNRLLTGSSDKTARI 371
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR 408
W D + L+ V+ H +I S A ++V TGS+D + +WR
Sbjct: 372 W-------DVQTGQCLQ---VLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIWR 415
Score = 177 (67.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 81/325 (24%), Positives = 143/325 (44%)
Query: 45 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR-DKVVNLWDL 103
S +GS D T +VWD + + + TL+ H + V ++A + I+ G DK LW
Sbjct: 105 SCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSA 164
Query: 104 RDYSCKLTVPTYEMVEAVC-AIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIV 162
C T + E VC + P S + +++ + T K + I GE +
Sbjct: 165 ETGKCYHTFRGHT-AEIVCLSFNPQS---TVVATGSMDTTAK------LWDIQSGEEVVT 214
Query: 163 RMWN-ADSACLYEQKSSD--VTISFEMD----DSKRGFTAATVLP--SNQGLLCVTADQQ 213
+ A+ L S D +T SF+ D+ G T++ + + D
Sbjct: 215 LTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCS 274
Query: 214 LLLYTTVEVPEKKMELILSK---RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 270
L+L +++ + K L G+++EILD F + +A A+ +VY+ +
Sbjct: 275 LILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCF-DYTGKLIATASADGTARVYNAT 333
Query: 271 SMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAV 330
+ C L GH + + G L+ TGS D + R+WD ++ C+ V GH +
Sbjct: 334 TRKCITKLEGHEGEISKISFNP--QGNRLL-TGSSDKTARIWDVQTGQCLQVLEGHTDEI 390
Query: 331 GAVAFSKKLQNFLVSGSSDHTIKVW 355
+ AF+ K N +++GS D++ ++W
Sbjct: 391 FSCAFNYK-GNIVITGSKDNSCRIW 414
Score = 148 (57.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 28/106 (26%), Positives = 51/106 (48%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
+L G+ D+ ++WD G C GH + F D L+ + S D T RV++
Sbjct: 276 ILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCF--DYTGKLIATASADGTARVYNAT 333
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+KC+ L+ H ++ ++ G+ L++ DK +WD++ C
Sbjct: 334 TRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQC 379
Score = 146 (56.5 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 37/127 (29%), Positives = 57/127 (44%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ D V+VWD G H GH +SS LF D SL+ +GS D T +WD
Sbjct: 234 IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALF--SWDCSLILTGSMDKTCMLWDAT 291
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAV 121
+ KCVATL H + G + +A D +++ C + +E + +
Sbjct: 292 SGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKI 351
Query: 122 CAIPPGS 128
P G+
Sbjct: 352 SFNPQGN 358
Score = 143 (55.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD V++ C +GH+G +S I F+P ++ L +GS D T R+WD+ +C+
Sbjct: 323 ADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNR--LLTGSSDKTARIWDVQTGQCL 380
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
L+ H + S A G+ +I+ +D +W
Sbjct: 381 QVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 54 (24.1 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H +T++A+ GS I+ D+ +WD
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWD 120
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 383 (139.9 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 138/526 (26%), Positives = 234/526 (44%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 86
+ H G V S++F PD K L+ SGS D TV++WD + + TLD H V S+A + DG
Sbjct: 747 ENHLGPVESVVFSPD-GKQLV-SGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 87 STLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGSAF-----DSFLSSYNQQ 140
L S D ++LWD T + + +V P G DS + ++
Sbjct: 805 KLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLA 864
Query: 141 TIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EMDDSKRGFT 194
T + +++L+ H +V R + ++ D L S D TI E+ S G +
Sbjct: 865 T-GELQQTLDSHSQSV--RSVA--FSPDGKLL-ASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 195 A--ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEE 252
+V S G + ++ TV++ +L + L G+++ + + F + +
Sbjct: 919 GWVKSVAFSPDGKKLASGSEK----NTVKLWNPATGELL-QTLEGHSQSVRSVAFSPDGK 973
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSVRL 311
Q LA +++ +++++ ++ GH L + A S GK L V+GS DN+++L
Sbjct: 974 Q-LASSSSDTTIKLWNSTTGELQQTFKGHD---LWIRAVAFSPDGKHL-VSGSDDNTIKL 1028
Query: 312 WDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLK 371
WD + H +V AVAFS + L S S D TIK+W D + + ++ +
Sbjct: 1029 WDLATSELQQSLEDHSRSVHAVAFSPDDKQ-LASSSLDSTIKLW--DSATGELQRTLE-- 1083
Query: 372 AKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS 431
H + + S+ +P+ L+ + S D T +W T G + SV FS
Sbjct: 1084 ------GHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFS 1137
Query: 432 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
P + + + D TIK+W + G L+T EGH+ + F G + S D KLW
Sbjct: 1138 PDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLW 1197
Query: 492 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
TGE + ++ H + ++A ++ A+ + LW T
Sbjct: 1198 DPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVT 1243
Score = 380 (138.8 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
Identities = 135/520 (25%), Positives = 230/520 (44%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+ D V +WD G GH G V S+ F PD LL SGS D T+ +WD
Sbjct: 765 LVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG--KLLASGSYDNTIDLWDSA 822
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAV 121
+ + T + H + S+A DG L SA D + +WDL + T+ ++ + V +V
Sbjct: 823 TGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSV 882
Query: 122 CAIPPGSAFDSFLSSYNQQTIKKKRRSL-EIHFITVGERGIVRM--WNADSACLYEQKSS 178
P G S SS + TIK + E+ G G V+ ++ D L
Sbjct: 883 AFSPDGKLLAS--SSLDS-TIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEK 939
Query: 179 DVTISFEMDDSKRGFTAATVLPSNQGLLCV--TADQQLLLYTTVEVPEKKMELI---LSK 233
+ T+ ++ + G T+ +Q + V + D + L ++ + K L +
Sbjct: 940 N-TV--KLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQ 996
Query: 234 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
G++ I + F + ++L ++ ++++DL++ L HS V + A
Sbjct: 997 TFKGHDLWIRAVAF-SPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAV---AF 1052
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
S + + S D++++LWDS + GH V +V FS L S S D TIK
Sbjct: 1053 SPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPD-GKLLASNSYDGTIK 1111
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W+ P+ + + + ++S+A +P+ + +G D T +W
Sbjct: 1112 LWN----------PLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGE 1161
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
+ T GH I SV FSP +++ + S D+T K+W + G L+ FEGH+ V +F
Sbjct: 1162 LLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFS 1221
Query: 474 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 513
G + S +KLW TGE + T + ++ ++A
Sbjct: 1222 PDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVA 1261
Score = 367 (134.2 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 137/520 (26%), Positives = 236/520 (45%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D + +WD G F+GH + S+ F PD + L S SDD+T+++WDL
Sbjct: 807 LASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKE--LASASDDSTIKIWDLA 864
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAV 121
+ TLD H V S+A + DG L S+ D + +W+ + ++ V++V
Sbjct: 865 TGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSV 924
Query: 122 CAIPPGSAFDSFLSSYNQQTIKKKRRSL-EIHFITVGERGIVRM--WNADSACLYEQKSS 178
P G S + T+K + E+ G VR ++ D L SS
Sbjct: 925 AFSPDGK---KLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQL-ASSSS 980
Query: 179 DVTISFEMDDSKRGFTAATVLPSNQGLLCV--TADQQLLLYTTVEVPEKKMELI---LSK 233
D TI ++ +S G T + + V + D + L+ + + K +L L +
Sbjct: 981 DTTI--KLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQ 1038
Query: 234 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
L ++ + + F +++Q LA ++ ++++D ++ L GHS+ V + T +
Sbjct: 1039 SLEDHSRSVHAVAFSPDDKQ-LASSSLDSTIKLWDSATGELQRTLEGHSQGVRSV-TFS- 1095
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
GK+L + S D +++LW+ + TG V +VAFS + L SG D TIK
Sbjct: 1096 PDGKLL-ASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQ-LASGYYDSTIK 1153
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW--RLPD 411
+W D + + Q + H I S+ +P+ L+ +GS D+TA +W +
Sbjct: 1154 LW--DSATGELLQTLE--------GHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGE 1203
Query: 412 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRAS 471
L+ + F GH + + SV FSP +++ ++S +TIK+W G L+T S +
Sbjct: 1204 LLQI--FEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVA 1261
Query: 472 FLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWA 511
F G ++ S K+W TGE + H +W+
Sbjct: 1262 FSPDGNRLASVDIFD-TKIWDPATGELLQALKGHSKWVWS 1300
Score = 348 (127.6 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 129/479 (26%), Positives = 216/479 (45%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPG 127
TL+ H V S+ + DG L+S D V +WD T+ + VE++ P G
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWN---ADSACLYEQKSSDVTISF 184
S SY+ TI S + E +W+ A S D TI
Sbjct: 805 KLLAS--GSYDN-TIDLWD-SATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTI-- 858
Query: 185 EMDDSKRGFTAATVLPSNQGLLCV--TADQQLLLYTTVEVPEKKMELI---LSKRLVGYN 239
++ D G T+ +Q + V + D +LL ++++ K L + L G +
Sbjct: 859 KIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 240 EEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKI 298
+ + F + ++ LA + V++++ ++ L GHS+ V + A S GK
Sbjct: 919 GWVKSVAFSPDGKK-LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSV---AFSPDGKQ 974
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L + S D +++LW+S + GH + AVAFS ++ LVSGS D+TIK+W D
Sbjct: 975 L-ASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKH-LVSGSDDNTIKLW--D 1030
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+ + +Q + H + ++++A +P+D + + S D T +W T
Sbjct: 1031 LATSELQQSLE--------DHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTL 1082
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH +G+ SV FSP +++ + S D TIK+W+ G +T G + V +F G Q
Sbjct: 1083 EGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQ 1142
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ S D +KLW TGE + T + H D+I ++ ++ A+G D LW +T
Sbjct: 1143 LASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPAT 1201
Score = 127 (49.8 bits), Expect = 0.00052, P = 0.00052
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
K + WS +T E H V F G Q+VS D VK+W TGE + T D
Sbjct: 734 KVEQTWSAEQ----QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLD 789
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
H + +LA ++ A+G D ++LW +T
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLWDSAT 823
Score = 38 (18.4 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 496 GECIATYDKHEDKIWALAVGK 516
G +A+ D + KIW A G+
Sbjct: 1266 GNRLASVDIFDTKIWDPATGE 1286
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 284 (105.0 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 71/298 (23%), Positives = 133/298 (44%)
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 296
G+ ++ L F + L+ A E V++++ S++ C + E LC G
Sbjct: 412 GHRSDVRTLSFSSDNIAVLSAAA--ESVKIWNRSTLQCIRTMP--CEYALC---SFFVPG 464
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
+V G+K +++L+D S + H GA+ +++ S + F V+G +D +K W
Sbjct: 465 DRQVVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGF-VTGGADKAVKFWD 523
Query: 357 FDGLSDDAEQPMNLKAKAV-VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 415
F+ ++D L K + +D+ + +P+ L+ D T ++ + L
Sbjct: 524 FELVTDKNSTQKRLSVKQTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFF 583
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 475
++ GHK + ++ S ++ T S D+ +KIW + G C ++ H SV+ F+ +
Sbjct: 584 LSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPK 643
Query: 476 GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ G D +K W E I T + H +IW LAV + + D + LW
Sbjct: 644 SHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLW 701
Score = 182 (69.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 371 KAKAVVAAHG--KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 428
K + ++ G +++ L +P+ + G +D V+ L +TF GH+ + S+
Sbjct: 54 KGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSL 113
Query: 429 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 488
++ + + + S D + IW + + S L +GH +V +A FL +V+ G D +V
Sbjct: 114 KYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMV 173
Query: 489 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
K W + C T H ++W L + + TG +D+ + W
Sbjct: 174 KWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAW 218
Score = 147 (56.8 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 31/124 (25%), Positives = 62/124 (50%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
P S +T GH+ + ++ FS D + + ++ +++KIW+ S C++T L
Sbjct: 402 PVRTSRITIGGHRSDVRTLSFSS-DNIAVLSAAAESVKIWNRSTLQCIRTMP--CEYALC 458
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
+ F+ Q+V G ++L+ + +G + T H+ +W++++ F TGG+D
Sbjct: 459 SFFVPGDRQVVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKA 518
Query: 530 VNLW 533
V W
Sbjct: 519 VKFW 522
Score = 138 (53.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 56/219 (25%), Positives = 96/219 (43%)
Query: 235 LVGYNE-EILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
L+G + I+ + GE+ +Y+AV E V ++DL +L G + V CL C
Sbjct: 18 LIGSQKGNIVFVTLRGEKGRYVAVPA-CEHVFIWDLRKGEKILILQGLKQEVTCL--CPS 74
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
G L V G +D ++R++ S GH AV ++ + + L L SGS D +
Sbjct: 75 PDGLHLAV-GYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQ-LGGRLASGSKDTDVI 132
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W D +++ + AV A L + + LV +G +D W L +
Sbjct: 133 IW--DVINESGLYRLKGHKDAVTQA-------LFLRERNLLVTSG-KDTMVKWWDLDNQH 182
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
T GH+ +W + + +IT + D ++ W I+
Sbjct: 183 CFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDIA 221
Score = 137 (53.3 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D V++WDV + KGHK V+ LF +++LL + D V+ WDL
Sbjct: 122 LASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFL--RERNLLVTSGKDTMVKWWDLD 179
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+ C T+ H + V + + S+ + LI+ D + WD+
Sbjct: 180 NQHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDI 220
Score = 135 (52.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
ADR V +W +D G C H V + F P + L F+ D ++ WD + +
Sbjct: 610 ADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSH--LFFTAGKDHKIKQWDADKFEHI 667
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
TL+ H + +A++ G ++SA DK + LW+
Sbjct: 668 QTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE 702
Score = 128 (50.1 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 44/143 (30%), Positives = 69/143 (48%)
Query: 237 GYNEEILDLKF--LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
G+ + LK+ LG LA + V ++D+ + S Y L GH + V T AL
Sbjct: 105 GHRAAVTSLKYDQLGGR---LASGSKDTDVIIWDVINESGLYRLKGHKDAV----TQALF 157
Query: 295 -SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAV-GAVAFSKKLQNFLVSGSSDHTI 352
+ L+VT KD V+ WD +++ C GH V G V S++ + L++G++D +
Sbjct: 158 LRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETR--LITGAADSEL 215
Query: 353 KVWSFDGLS--DDAEQPMNLKAK 373
+ W L DD E+P K K
Sbjct: 216 RAWDIAYLQEIDDPEEPEPKKIK 238
Score = 128 (50.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 66/306 (21%), Positives = 132/306 (43%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT-YEMV--------E 119
T+ H S V +++ +SD ++SA + V +W+ C T+P Y + +
Sbjct: 409 TIGGHRSDVRTLSFSSDNIAVLSAAAESV-KIWNRSTLQCIRTMPCEYALCSFFVPGDRQ 467
Query: 120 AVCAIPPGSAFDSFLSSYNQ-QTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSS 178
V G+ L+S N +TI +L ++ +RG V AD A K
Sbjct: 468 VVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVT-GGADKAV----KFW 522
Query: 179 DVTISFEMDDSKRGFTA--ATVLPSNQGLL--CVTADQQLLLYTTVEVPEK-----KMEL 229
D + + + +++ + +L ++ +L C + DQ+LL + ++ K ++
Sbjct: 523 DFELVTDKNSTQKRLSVKQTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKF 582
Query: 230 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 289
LS L G+ ++ + + + +A + V+++ L C L H + V+ L
Sbjct: 583 FLS--LYGHKLPVICMD-ISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLR 639
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
S L T KD+ ++ WD++ + GH + +A S +++VS S D
Sbjct: 640 FVPKSH---LFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPS-GDYVVSASHD 695
Query: 350 HTIKVW 355
++++W
Sbjct: 696 KSLRLW 701
Score = 124 (48.7 bits), Expect = 0.00070, P = 0.00070
Identities = 33/151 (21%), Positives = 63/151 (41%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
L G D I+V+S LS + N H + SL + +GS+D
Sbjct: 80 LAVGYEDGAIRVFSL--LSGEGNITFN--------GHRAAVTSLKYDQLGGRLASGSKDT 129
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
+W + + + +GHK + F +++T+ D +K W + + C KT G
Sbjct: 130 DVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVG 189
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTV 493
H + V ++ ++++ AD ++ W +
Sbjct: 190 HRTEVWGLVLVSEETRLITGAADSELRAWDI 220
Score = 122 (48.0 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + V+ + G F GH+ V+S+ + D L SGS D V +WD++ + +
Sbjct: 86 DGAIRVFSLLSGEGNITFNGHRAAVTSLKY--DQLGGRLASGSKDTDVIIWDVINESGLY 143
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
L H VT + + L+++G+D +V WDL + C T+
Sbjct: 144 RLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHCFKTM 187
Score = 105 (42.0 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 39/162 (24%), Positives = 65/162 (40%)
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
+LAV ++V+ L S + GH V L L G++ +GSKD V +WD
Sbjct: 79 HLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQLG-GRL--ASGSKDTDVIIWD 135
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 373
+ + GH AV F ++ +N LV+ D +K W D N
Sbjct: 136 VINESGLYRLKGHKDAVTQALFLRE-RNLLVTSGKDTMVKWWDLD----------NQHCF 184
Query: 374 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 415
+ H ++ L + ++ + TG+ D W + L +
Sbjct: 185 KTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDIAYLQEI 226
Score = 100 (40.3 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 28/92 (30%), Positives = 44/92 (47%)
Query: 12 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 71
V +WD+ G +G K V+ + P D L G +D +RV+ LL+ + T +
Sbjct: 47 VFIWDLRKGEKILILQGLKQEVTCLC--PSPDGLHLAVGYEDGAIRVFSLLSGEGNITFN 104
Query: 72 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H + VTS+ G L S +D V +WD+
Sbjct: 105 GHRAAVTSLKYDQLGGRLASGSKDTDVIIWDV 136
Score = 83 (34.3 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L +++ ++ L+F+ + + + +++ +D L GH + + CL A
Sbjct: 626 RSLFAHDDSVMHLRFVPKSHLFFTAGKD-HKIKQWDADKFEHIQTLEGHHQEIWCL---A 681
Query: 293 LSSGKILIVTGSKDNSVRLWD 313
+S +V+ S D S+RLW+
Sbjct: 682 VSPSGDYVVSASHDKSLRLWE 702
Score = 57 (25.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 62/270 (22%), Positives = 108/270 (40%)
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRR 147
+L+ GRD+VVNL + T ++E C + + + +KK R+
Sbjct: 273 SLMREGRDRVVNLAVDKTGRILACHGTDSVLEVFCILSKAE-----VQKKMDKKLKKARK 327
Query: 148 SLEIHFITVGE--RGIVRMWNADSACLYEQ-KSSDVTISFEMDDSKRGFTAATVLPSNQG 204
++ E V M D + K+S SF++ S +G A L N
Sbjct: 328 KARLNSANEEEDPETSVSMTLQDEILRVTKIKTSAKIKSFDLIHSPQGELKAVFLLQNN- 386
Query: 205 LLCVTADQQLLLYTTVEVPEKKMELILSKRLV--GYNEEILDLKFLGEEEQYLAVATNIE 262
L+ + L T++ P+ + + R+ G+ ++ L F + L+ A E
Sbjct: 387 LV-----ELYSLSTSLPNPQP----VRTSRITIGGHRSDVRTLSFSSDNIAVLSAAA--E 435
Query: 263 QVQVYDLSSMSC-----------SYVLAGHSEIVLCLDT-----CALSSGKILIVTGSKD 306
V++++ S++ C S+ + G ++V+ T L+SG +L + D
Sbjct: 436 SVKIWNRSTLQCIRTMPCEYALCSFFVPGDRQVVIGTKTGNMQLYDLASGNLLETIAAHD 495
Query: 307 NSVRLWD-SESRCCVGVGTGHMGAVGAVAF 335
+ LW S S G TG GA AV F
Sbjct: 496 GA--LWSMSLSPDQRGFVTG--GADKAVKF 521
Score = 45 (20.9 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 270
K +VG+ E+ L + EE + + A + E ++ +D++
Sbjct: 185 KTMVGHRTEVWGLVLVSEETRLITGAADSE-LRAWDIA 221
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 330 (121.2 bits), Expect = 6.8e-29, P = 6.8e-29
Identities = 79/300 (26%), Positives = 139/300 (46%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ + + F +A + + +++ + C Y GH+ ++CL A +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCL---AFN 186
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
L+ TGS D + +LWD ES V GH + ++ F+ LV+GS DHT +
Sbjct: 187 PQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDR-LVTGSFDHTAIL 245
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 414
W + P K V++ H +I+ + + SL+ T S D++ VW
Sbjct: 246 W---------DVPSGRKVH-VLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQC 295
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 474
+ T GH + V F+ Q++ TAS D T +++S CL EGH + + F
Sbjct: 296 LATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNA 355
Query: 475 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 534
+G+++++ D ++W V+TG C+ + H D+I++ A + + TG D +WH
Sbjct: 356 QGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 259 (96.2 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 70/253 (27%), Positives = 109/253 (43%)
Query: 285 VLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLV 344
+L L A + +TGS D + ++WD+ S + GH V A+AF+ + +
Sbjct: 92 ILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVA 151
Query: 345 SGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTA 404
+GS D T K+WS AE K H +I LA P +LV TGS D TA
Sbjct: 152 TGSFDKTCKLWS-------AETG---KCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTA 201
Query: 405 CVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
+W + V T GH I S+ F+ ++T S D T +W + G + GH
Sbjct: 202 KLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHR 261
Query: 465 SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 524
+ F + I + D K+W G+C+AT H D++ + ++ AT
Sbjct: 262 GEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATA 321
Query: 525 GSDALVNLWHDST 537
+D ++ T
Sbjct: 322 SADGTSRVFSTDT 334
Score = 224 (83.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 49/157 (31%), Positives = 75/157 (47%)
Query: 378 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS-PVDQV 436
AH + ++A + S TGS DRT +W + T GH+ ++++ F+ P
Sbjct: 90 AHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDK 149
Query: 437 VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 496
V T S DKT K+WS G C TF GHT+ ++ +F + + + D KLW V +G
Sbjct: 150 VATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESG 209
Query: 497 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
E ++T H +I +L + TG D LW
Sbjct: 210 EEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILW 246
Score = 219 (82.2 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 83/315 (26%), Positives = 144/315 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFH-PDTDKSLLFSGSDDATVRVWDLLAKKCV 67
DR +WD G H +GH+ VV +I F+ P DK + +GS D T ++W KC
Sbjct: 113 DRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDK--VATGSFDKTCKLWSAETGKCF 170
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGR-DKVVNLWDLRDYSCKLTVPTY--EMVEAVCAI 124
T H + + +A STL++ G D LWD+ T+ + E++ ++C
Sbjct: 171 YTFRGHTAEIVCLAFNPQ-STLVATGSMDTTAKLWDVESGEEVSTLAGHFAEII-SLCFN 228
Query: 125 PPGSAFDSFLSSYNQQTIKKKRRS-LEIHFITVGERGIVRMWNADSAC-LYEQKSSDVTI 182
G + S++ I S ++H ++ G RG + + C L S D
Sbjct: 229 TTGDRLVT--GSFDHTAILWDVPSGRKVHVLS-GHRGEISCVQFNWDCSLIATASLDK-- 283
Query: 183 SFEMDDSKRGFTAATVLPSNQGLL--CVTADQQLLLYTTVEVPEKKMELILSK---RLVG 237
S ++ D++ G AT+L N +L C QL+ + + + + +L G
Sbjct: 284 SCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEG 343
Query: 238 YNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGK 297
+ EI + F + + L + + + +V+ + + +C VL GHS+ + +CA +
Sbjct: 344 HKGEISKVCFNAQGSRVLTASVD-KTSRVWCVKTGACLQVLEGHSDEIF---SCAFNYEG 399
Query: 298 ILIVTGSKDNSVRLW 312
I+TGSKDN+ R+W
Sbjct: 400 DTIITGSKDNTCRIW 414
Score = 179 (68.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 72/321 (22%), Positives = 138/321 (42%)
Query: 45 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR-DKVVNLWDL 103
S +GS D T ++WD + + + TL+ H + V ++A + ++ G DK LW
Sbjct: 105 SCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSA 164
Query: 104 RDYSCKLTVPTYEMVEAVC-AIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIV 162
C T + E VC A P S + S + E+ + I+
Sbjct: 165 ETGKCFYTFRGHT-AEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEII 223
Query: 163 RM-WNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQG-LLCVTADQQLLLYTTV 220
+ +N L I +++ ++ VL ++G + CV + L T
Sbjct: 224 SLCFNTTGDRLVTGSFDHTAILWDVPSGRK----VHVLSGHRGEISCVQFNWDCSLIATA 279
Query: 221 EVPEKKMELILSK------RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC 274
+ +K ++ ++ L+G+N+E+LD+ F Q +A A+ +V+ + C
Sbjct: 280 SL-DKSCKVWDAEGGQCLATLLGHNDEVLDVCF-NYTGQLIATASADGTSRVFSTDTFQC 337
Query: 275 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 334
L GH + C + G ++T S D + R+W ++ C+ V GH + + A
Sbjct: 338 LCQLEGHKGEIS--KVCFNAQGS-RVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCA 394
Query: 335 FSKKLQNFLVSGSSDHTIKVW 355
F+ + + +++GS D+T ++W
Sbjct: 395 FNYE-GDTIITGSKDNTCRIW 414
Score = 170 (64.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 39/116 (33%), Positives = 56/116 (48%)
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
+ H + +V F+ IT S D+T KIW + G L T EGH + V +F
Sbjct: 89 QAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGD 148
Query: 479 IVSCGA-DGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
V+ G+ D KLW+ TG+C T+ H +I LA ++ + ATG D LW
Sbjct: 149 KVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLW 204
Score = 158 (60.7 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 86/349 (24%), Positives = 143/349 (40%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSA 129
L H +T++A GS I+ D+ +WD T+ + V V AI +
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNV--VYAIAFNNP 145
Query: 130 F-DSFLSSYNQQTIKKKRRSLEIHFITV-GERG-IVRM-WNADSACLYEQKSSDVTIS-F 184
+ D + +T K F T G IV + +N S L S D T +
Sbjct: 146 YGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQST-LVATGSMDTTAKLW 204
Query: 185 EMDDSKRGFTAATVLPSNQGLLCVTADQQLLL----YTTV--EVPEKKMELILSKRLVGY 238
+++ + T A L T +L+ +T + +VP + +LS G+
Sbjct: 205 DVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLS----GH 260
Query: 239 NEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI 298
EI ++F + +A A+ + +V+D C L GH++ VL D C +G+
Sbjct: 261 RGEISCVQF-NWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVL--DVCFNYTGQ- 316
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
LI T S D + R++ +++ C+ GH G + V F+ + L + S D T +VW
Sbjct: 317 LIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTA-SVDKTSRVWC-- 373
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
+ A V+ H +I S A + TGS+D T +W
Sbjct: 374 -VKTGA-------CLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 35/127 (27%), Positives = 59/127 (46%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+ D ++WDV G H GH+G +S + F+ D SL+ + S D + +VWD
Sbjct: 234 LVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDC--SLIATASLDKSCKVWDAE 291
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAV 121
+C+ATL H V + G + +A D ++ + C + ++ + V
Sbjct: 292 GGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKV 351
Query: 122 CAIPPGS 128
C GS
Sbjct: 352 CFNAQGS 358
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 28/94 (29%), Positives = 44/94 (46%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD V+ D C +GHKG +S + F+ + L + S D T RVW + C+
Sbjct: 323 ADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVL--TASVDKTSRVWCVKTGACL 380
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
L+ H + S A +G T+I+ +D +W
Sbjct: 381 QVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 336 (123.3 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 85/282 (30%), Positives = 141/282 (50%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 310
+++ + + V V+D++S Y L GHS VLCLD C + L+V+GS D+++
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRN---LLVSGSSDSTII 286
Query: 311 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
+WD ++R + V GH V V S +N+++S S DHT +VW D S AE M+
Sbjct: 287 IWDWQNRRPLKVYFGHTDNVLGVVVS---ENYIISSSRDHTARVWRLDATSP-AEACMH- 341
Query: 371 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 430
V+ H +NS+ + L+ T S DRT W + + H+RGI ++
Sbjct: 342 ----VLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQY 397
Query: 431 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 490
+ + +++ S D TI+I+ S G L+ +GH + F +IVS G DG V++
Sbjct: 398 N--GKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRF--NDEKIVSGGYDGTVRI 453
Query: 491 WTVRTGE--CIATYDKHEDKIWALAVGKKTEMFATGGSDALV 530
W TGE C+ ++ +++ L + + T S+ LV
Sbjct: 454 WNFNTGEQHCVL-HNSRNSRVFGLQFDHRRIIACTHSSEILV 494
Score = 301 (111.0 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 77/243 (31%), Positives = 125/243 (51%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
++V+GSKD +V +WD SR + GH G+V + F ++ +N LVSGSSD TI +W +
Sbjct: 233 IMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRR-RNLLVSGSSDSTIIIWDWQ 291
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL----PDLVS 414
+P+ V H D N L V +++ + + S+D TA VWRL P
Sbjct: 292 N-----RRPLK-----VYFGH-TD-NVLGVVVSENYIISSSRDHTARVWRLDATSPAEAC 339
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 474
+ RGH + SV++S +++TAS D+T++ W I+ G C++ H + A +
Sbjct: 340 MHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQY-- 397
Query: 475 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 534
G IVS +D ++++ +G+ + HED I V E +GG D V +W+
Sbjct: 398 NGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLI--RTVRFNDEKIVSGGYDGTVRIWN 455
Query: 535 DST 537
+T
Sbjct: 456 FNT 458
Score = 152 (58.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 38/151 (25%), Positives = 66/151 (43%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D ++ +GS+DRT VW + + GH + ++F ++++ S D TI IW
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWD 289
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW----TVRTGECIATYDKHE 506
+ LK + GHT +VL + I+S D ++W T C+ H
Sbjct: 290 WQNRRPLKVYFGHTDNVL--GVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHL 347
Query: 507 DKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ ++ KT + T SD + W +T
Sbjct: 348 ASVNSVQYSSKTGLIVTASSDRTLRTWDITT 378
Score = 127 (49.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 31/101 (30%), Positives = 52/101 (51%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ DR V VWDV+ F + GH G V + F ++LL SGS D+T+ +WD
Sbjct: 234 MVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFC--RRRNLLVSGSSDSTIIIWDWQ 291
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
++ + H V + ++ + +IS+ RD +W L
Sbjct: 292 NRRPLKVYFGHTDNVLGVVVSEN--YIISSSRDHTARVWRL 330
Score = 123 (48.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 41/162 (25%), Positives = 69/162 (42%)
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
SS LIVT S D ++R WD + C+ + H + ++ K F+VSGSSD TI+
Sbjct: 356 SSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGK---FIVSGSSDLTIR 412
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL-PDL 412
+ F+ S K ++ H I ++ ND + +G D T +W
Sbjct: 413 I--FEASSG--------KLLRMLQGHEDLIRTVRF--NDEKIVSGGYDGTVRIWNFNTGE 460
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 454
V ++ ++F + +I + I +W+ DG
Sbjct: 461 QHCVLHNSRNSRVFGLQFD--HRRIIACTHSSEILVWNFDDG 500
Score = 85 (35.0 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
D ++ SGS D TV VWD+ ++ + L H V + + L+S D + +WD
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWD 289
Score = 47 (21.6 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 85 DGSTLISAGRDKVVNLWDL 103
D ++S +D+ V++WD+
Sbjct: 230 DDEIMVSGSKDRTVSVWDV 248
>ASPGD|ASPL0000054401 [details] [associations]
symbol:AN0305 species:162425 "Emericella nidulans"
[GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676
GO:GO:0030529 EMBL:AACD01000006 InterPro:IPR007148 Pfam:PF04003
HOGENOM:HOG000212524 KO:K14556 OMA:SIFAHDD OrthoDB:EOG4N07P3
RefSeq:XP_657909.1 ProteinModelPortal:Q5BGM5 STRING:Q5BGM5
EnsemblFungi:CADANIAT00002409 GeneID:2876084 KEGG:ani:AN0305.2
Uniprot:Q5BGM5
Length = 963
Score = 276 (102.2 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 87/350 (24%), Positives = 159/350 (45%)
Query: 205 LLCVTADQQLLLYTTVEVPEK-KME------LILSKRLVGYNEEILDLKFLGEEEQYLAV 257
LL T + QL Y+ + +K K E L+ + G+ +I + L +++ LA
Sbjct: 384 LLAATTNNQLEAYSVTTLNKKSKSEGDVEYNRTLAIDIPGHRTDIRSVA-LSSDDRMLAS 442
Query: 258 ATNIEQVQVYDLSSMSCSYVL-AGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES 316
A+N ++V+++ + +C L G++ LC A G ++V G+KD + ++D S
Sbjct: 443 ASN-GSLKVWNVRTQNCLRTLECGYA---LC---SAFLPGDKIVVVGNKDGELEIFDIAS 495
Query: 317 RCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD--AEQPMNLKAKA 374
+ H G V ++ ++ LVSGS+D + K W+F + ++ + + +
Sbjct: 496 STLLDTIKAHDGPVWSLQVHPDGKS-LVSGSADKSAKFWNFQVVQEEIPGTKRTTPRLRL 554
Query: 375 VVAAHGK---DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS 431
V K DI S+ +P+ L+ D T V+ L + GHK + +++ S
Sbjct: 555 VHTRTLKVSDDILSVRFSPDARLLAVALLDNTVKVFFNDSLKLFLNLYGHKLPVLNMDIS 614
Query: 432 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT-----RGAQIVSCGADG 486
++++T S DKT+++W + G C K+F H S++ +F+ G S D
Sbjct: 615 WDSKLIVTCSADKTVRLWGLDFGDCHKSFLAHEDSIMAVAFVPSNNEGNGHNFFSVSKDR 674
Query: 487 LVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 536
++K W E I H +IWA+A+ E T D + W +
Sbjct: 675 VIKYWDGDKFEHIQKLSGHHGEIWAMAISHTGEFIVTASHDKSIRTWEQT 724
Score = 152 (58.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 47/185 (25%), Positives = 77/185 (41%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+ G +D S+RLWDS + + GH A+ +AF L SGS D I +W D
Sbjct: 87 IFAVGYEDGSIRLWDSRTETVMISFNGHKSAITQLAFDNAGVR-LASGSRDTNIILW--D 143
Query: 359 GLSDDAEQPMNLKAKAVVAAHG-----KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+S+ + + + H + +N ++ + + T +D VW L
Sbjct: 144 LISEVGLFKLRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTGKDALIKVWDLASQH 203
Query: 414 SVVTFRGHKRG-IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 472
+ T G WS+ +P IT D +K WSI +G+ ++ + T S R
Sbjct: 204 CIETHIAQSNGECWSLGLAPDQSGCITGGNDGELKAWSIDEGAMIEISKEKTGSENRRIL 263
Query: 473 LTRGA 477
RG+
Sbjct: 264 ADRGS 268
Score = 133 (51.9 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 28/101 (27%), Positives = 49/101 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL---LFSGSDDATVRVWDLLAK 64
AD+ V +W +D G C F H+ + ++ F P ++ FS S D ++ WD
Sbjct: 625 ADKTVRLWGLDFGDCHKSFLAHEDSIMAVAFVPSNNEGNGHNFFSVSKDRVIKYWDGDKF 684
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
+ + L H + +MAI+ G +++A DK + W+ D
Sbjct: 685 EHIQKLSGHHGEIWAMAISHTGEFIVTASHDKSIRTWEQTD 725
Score = 132 (51.5 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 34/157 (21%), Positives = 64/157 (40%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
++ + G +D + +W +++F GHK I + F + + S D I +W
Sbjct: 84 DEDIFAVGYEDGSIRLWDSRTETVMISFNGHKSAITQLAFDNAGVRLASGSRDTNIILWD 143
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQI-------------VSCGADGLVKLWTVRTGE 497
+ L GHT + FL ++ ++ G D L+K+W + +
Sbjct: 144 LISEVGLFKLRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTGKDALIKVWDLASQH 203
Query: 498 CIATYDKHED-KIWALAVGKKTEMFATGGSDALVNLW 533
CI T+ + + W+L + TGG+D + W
Sbjct: 204 CIETHIAQSNGECWSLGLAPDQSGCITGGNDGELKAW 240
Score = 127 (49.8 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVS-SILFHPDTDKSLLFSGSDDATVRVWDLLAKK 65
GA +VL WD+ G +K +++ TD+ + G +D ++R+WD +
Sbjct: 47 GAGEEVLCWDIKKGELLGRWKDSACRAQVTVITQSKTDEDIFAVGYEDGSIRLWDSRTET 106
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+ + + H S +T +A + G L S RD + LWDL
Sbjct: 107 VMISFNGHKSAITQLAFDNAGVRLASGSRDTNIILWDL 144
Score = 110 (43.8 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD F GHK ++ + F D L SGS D + +WDL+++ +
Sbjct: 94 DGSIRLWDSRTETVMISFNGHKSAITQLAF--DNAGVRLASGSRDTNIILWDLISEVGLF 151
Query: 69 TLDKHFSRVTSM-------------AITSDGSTLISAGRDKVVNLWDLRDYSC 108
L H ++TS+ ++ LI+ G+D ++ +WDL C
Sbjct: 152 KLRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTGKDALIKVWDLASQHC 204
Score = 106 (42.4 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 38/158 (24%), Positives = 72/158 (45%)
Query: 299 LIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV--GAVAFSKKLQNFLVSGSSDHTIKVW 355
L+ DN+V+++ ++S + + + GH V +++ KL +V+ S+D T+++W
Sbjct: 577 LLAVALLDNTVKVFFNDSLKLFLNL-YGHKLPVLNMDISWDSKL---IVTCSADKTVRLW 632
Query: 356 SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 415
D D + +++A N+ N V S+DR W +
Sbjct: 633 GLD--FGDCHKSFLAHEDSIMAVAFVPSNNEGNGHNFFSV---SKDRVIKYWDGDKFEHI 687
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
GH IW++ S + ++TAS DK+I+ W +D
Sbjct: 688 QKLSGHHGEIWAMAISHTGEFIVTASHDKSIRTWEQTD 725
Score = 97 (39.2 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 57/290 (19%), Positives = 109/290 (37%)
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-------- 288
G+ I L F + LA + + ++DL S + L GH++ + L
Sbjct: 113 GHKSAITQLAFDNAGVR-LASGSRDTNIILWDLISEVGLFKLRGHTDQITSLHFLVPTLE 171
Query: 289 --DTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL---QNFL 343
+ LS ++T KD +++WD S+ C+ H+ +S L Q+
Sbjct: 172 LLNEAGLSEHAGFLITTGKDALIKVWDLASQHCIET---HIAQSNGECWSLGLAPDQSGC 228
Query: 344 VSGSSDHTIKVWSFD--GLSDDAEQPMNLKAKAVVA------AHGKD-INSLAVAPNDSL 394
++G +D +K WS D + + +++ + + ++A +GKD ++ P
Sbjct: 229 ITGGNDGELKAWSIDEGAMIEISKEKTGSENRRILADRGSFYRNGKDRTTGISFHPRADY 288
Query: 395 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV-EFSPVDQVVITASGDKTIKIWS-IS 452
V ++ +WR+ V KR E + TA + K +S
Sbjct: 289 VAFHGSEKAVEIWRIRSETEVQKSLARKRKRRKEKEAQRAAETGETAEKTENGKAEDDVS 348
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 502
+ F HT ++R R + + G ++L T + Y
Sbjct: 349 TAPVTEVFVSHT--IVRTGGKVRSFDWIRTKSSGKIQLLAATTNNQLEAY 396
Score = 91 (37.1 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 27/113 (23%), Positives = 50/113 (44%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL-----------LFSGS 51
L G+ D +++WD+ +GH ++S+ F T + L L +
Sbjct: 130 LASGSRDTNIILWDLISEVGLFKLRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTG 189
Query: 52 DDATVRVWDLLAKKCVAT-LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
DA ++VWDL ++ C+ T + + S+ + D S I+ G D + W +
Sbjct: 190 KDALIKVWDLASQHCIETHIAQSNGECWSLGLAPDQSGCITGGNDGELKAWSI 242
Score = 91 (37.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 24/101 (23%), Positives = 47/101 (46%)
Query: 4 LLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 63
L ++ + VW+V C + + S+ L P DK ++ G+ D + ++D+ +
Sbjct: 440 LASASNGSLKVWNVRTQNCLRTLECGYALCSAFL--PG-DK-IVVVGNKDGELEIFDIAS 495
Query: 64 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+ T+ H V S+ + DG +L+S DK W+ +
Sbjct: 496 STLLDTIKAHDGPVWSLQVHPDGKSLVSGSADKSAKFWNFQ 536
Score = 72 (30.4 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 22/101 (21%), Positives = 44/101 (43%)
Query: 2 FALLEGADRKVLVWDVDGGFC--THYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 59
F + G D + VWD+ C TH + + G S+ PD +S +G +D ++ W
Sbjct: 184 FLITTGKDALIKVWDLASQHCIETHIAQSN-GECWSLGLAPD--QSGCITGGNDGELKAW 240
Query: 60 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+ + + + K + + I +D + G+D+ +
Sbjct: 241 SI-DEGAMIEISKEKTGSENRRILADRGSFYRNGKDRTTGI 280
Score = 71 (30.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 42/198 (21%), Positives = 81/198 (40%)
Query: 139 QQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATV 198
Q T+ + ++ E F E G +R+W DS ++ V ISF + K T
Sbjct: 74 QVTVITQSKTDEDIFAVGYEDGSIRLW--DS------RTETVMISF--NGHKSAITQLAF 123
Query: 199 LPSNQGLLCVTADQQLLLYTTV-EVPEKKM----ELILSKRLVGYNEEILDLKFLGEEEQ 253
+ L + D ++L+ + EV K+ + I S + E+L+ L E
Sbjct: 124 DNAGVRLASGSRDTNIILWDLISEVGLFKLRGHTDQITSLHFLVPTLELLNEAGLSEHAG 183
Query: 254 YLAVATNIEQVQVYDLSSMSC--SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 311
+L ++V+DL+S C +++ + E C + L+ + +TG D ++
Sbjct: 184 FLITTGKDALIKVWDLASQHCIETHIAQSNGE---CW-SLGLAPDQSGCITGGNDGELKA 239
Query: 312 WDSESRCCVGVGTGHMGA 329
W + + + G+
Sbjct: 240 WSIDEGAMIEISKEKTGS 257
Score = 53 (23.7 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 25 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 59
+++ K + I FHP D + F GS+ A V +W
Sbjct: 269 FYRNGKDRTTGISFHPRADY-VAFHGSEKA-VEIW 301
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 502 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
Y +D+ ++ + + A GS+ V +W
Sbjct: 270 YRNGKDRTTGISFHPRADYVAFHGSEKAVEIW 301
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 300 (110.7 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 79/307 (25%), Positives = 142/307 (46%)
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L L G+NE + + F + + LA A++ V+++D ++ + +L GH++ V +
Sbjct: 297 LQNTLEGHNEWVKSVVF-SHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSV-- 353
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
S LI +GS D +VR+W++ + H +V AV+F+ + L S S
Sbjct: 354 -VFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRR-LASASDGG 411
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
+K+W D + + V+ H +NS++ +P+ L+ + S DRT +W
Sbjct: 412 NVKIW--DTRTGSLQN--------VLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAA 461
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
T GH + SV FS +++ +AS D T+KIW + E H + V
Sbjct: 462 TGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSV 521
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 530
F + S D VK+W TG T + H+D++ +++ + + A+ D V
Sbjct: 522 VFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTV 581
Query: 531 NLWHDST 537
+W+ +T
Sbjct: 582 KIWYAAT 588
Score = 280 (103.6 bits), Expect = 9.0e-28, Sum P(3) = 9.0e-28
Identities = 74/303 (24%), Positives = 133/303 (43%)
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L + L G+N+ + + F + + +A +N V++++ ++ + H + V+ + +
Sbjct: 339 LQRMLKGHNDSVRSVVF-SHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAV-S 396
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
A S ++ + S +V++WD+ + V GH V +V+FS L S S D
Sbjct: 397 FAHDSRRL--ASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPD-SRLLASASDDR 453
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
T+K+W + ++ + H + S+ + + L+ + S D T +W
Sbjct: 454 TVKIWH--AATGSLQRTLE--------GHNDWVRSVVFSHDSRLIASASDDMTVKIWDTA 503
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
+ H + SV FS +++ +AS D T+KIW + GS T EGH V
Sbjct: 504 TVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSV 563
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 530
SF + S DG VK+W TG T+D +LA + + A+ D V
Sbjct: 564 SFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTV 623
Query: 531 NLW 533
+W
Sbjct: 624 KIW 626
Score = 269 (99.8 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 80/318 (25%), Positives = 132/318 (41%)
Query: 225 KKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQV-----QVYDLSSMSCSYVLA 279
+++E + KR + ++LD+ E+ Y NI + QVY + +
Sbjct: 207 QRLERFIRKR--SSDIDLLDVV----EDSYRFALWNISGIKCAPLQVYASALLFSPAQFK 260
Query: 280 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL 339
GH V + + S L+ + S D +V++WD+ + GH V +V FS
Sbjct: 261 GHDRAV---GSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHD- 316
Query: 340 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGS 399
L S S D T+K+W D A + K H + S+ + + L+ +GS
Sbjct: 317 SRLLASASDDGTVKIW------DTATGTLQRMLKG----HNDSVRSVVFSHDSRLIASGS 366
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
DRT +W + TF H+ + +V F+ + + +AS +KIW GS
Sbjct: 367 NDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNV 426
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
EGH V SF + S D VK+W TG T + H D + ++ +
Sbjct: 427 LEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSR 486
Query: 520 MFATGGSDALVNLWHDST 537
+ A+ D V +W +T
Sbjct: 487 LIASASDDMTVKIWDTAT 504
Score = 255 (94.8 bits), Expect = 4.8e-25, Sum P(3) = 4.8e-25
Identities = 75/289 (25%), Positives = 130/289 (44%)
Query: 219 TVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVL 278
TV + E L L + + ++ + F + + LA A++ V+++D + S VL
Sbjct: 370 TVRIWETTTGL-LRHTFEDHEDSVMAVSF-AHDSRRLASASDGGNVKIWDTRTGSLQNVL 427
Query: 279 AGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKK 338
GH + C+++ + S L+ + S D +V++W + + GH V +V FS
Sbjct: 428 EGHDD---CVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHD 484
Query: 339 LQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTG 398
+ S S D T+K+W D A P+ ++ H + S+ + + L+ +
Sbjct: 485 -SRLIASASDDMTVKIW------DTATVPLQNNLES----HDNWVRSVVFSHDSRLLASA 533
Query: 399 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
S D T +W T GH + SV FSP +++ +AS D T+KIW + G+
Sbjct: 534 SDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQH 593
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD-KHE 506
TF+G + +F + S DG VK+W + T+D HE
Sbjct: 594 TFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDLDHE 642
Score = 214 (80.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 87/365 (23%), Positives = 153/365 (41%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V +WD F + +GH V S++F D+ LL S SDD TV++WD
Sbjct: 284 DGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDS--RLLASASDDGTVKIWDTATGTLQR 341
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
L H V S+ + D + S D+ V +W+ + T +E ++V A+
Sbjct: 342 MLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHE--DSVMAV--SF 397
Query: 129 AFDS--FLSSYNQQTIKK-KRRSLEIHFITVGERGIVRM--WNADSACLYEQKSSDVTIS 183
A DS S+ + +K R+ + + G V ++ DS L S D T+
Sbjct: 398 AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLL-ASASDDRTVK 456
Query: 184 F------EMDDSKRGFT--AATVLPSNQGLLCVTA--DQQLLLYTTVEVPEKKMELILSK 233
+ + G +V+ S+ L +A D + ++ T VP L
Sbjct: 457 IWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVP-------LQN 509
Query: 234 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
L ++ + + F + + LA A++ V+++D ++ S L GH + V ++ +
Sbjct: 510 NLESHDNWVRSVVF-SHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRV---NSVSF 565
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
S L+ + S D +V++W + + G ++AFS N L S D T+K
Sbjct: 566 SPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHT-SNLLASAMDDGTVK 624
Query: 354 VWSFD 358
+W +
Sbjct: 625 IWDME 629
Score = 202 (76.2 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 53/223 (23%), Positives = 105/223 (47%)
Query: 332 AVAFSKKLQNFLVSGSSD----------HTIKVWSFDGLSDDAEQPMNLKAKAVVAA--- 378
A++ ++L+ F+ SSD + +W+ G+ P+ + A A++ +
Sbjct: 202 ALSSMQRLERFIRKRSSDIDLLDVVEDSYRFALWNISGIKC---APLQVYASALLFSPAQ 258
Query: 379 ---HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ 435
H + + S++ + + L+ + S D T +W T GH + SV FS +
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSR 318
Query: 436 VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLWTVR 494
++ +AS D T+KIW + G+ + +GH SV R+ + +++++ G+ D V++W
Sbjct: 319 LLASASDDGTVKIWDTATGTLQRMLKGHNDSV-RSVVFSHDSRLIASGSNDRTVRIWETT 377
Query: 495 TGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
TG T++ HED + A++ + A+ V +W T
Sbjct: 378 TGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRT 420
Score = 199 (75.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 100/425 (23%), Positives = 181/425 (42%)
Query: 49 SGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
SG A ++V+ A H V S++ + D L SA D V +WD
Sbjct: 238 SGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFL 297
Query: 109 KLTVPTY-EMVEAVC-----AIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIV 162
+ T+ + E V++V + ++ D + ++ T +R L+ H +V R +V
Sbjct: 298 QNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTAT-GTLQRMLKGHNDSV--RSVV 354
Query: 163 RMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTA--DQQLLLYTT- 219
++ DS L S+D T+ + ++ G T ++ V+ D + L +
Sbjct: 355 --FSHDSR-LIASGSNDRTV--RIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASD 409
Query: 220 ---VEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSY 276
V++ + + L L G+++ + + F + + LA A++ V+++ ++ S
Sbjct: 410 GGNVKIWDTRTGS-LQNVLEGHDDCVNSVSF-SPDSRLLASASDDRTVKIWHAATGSLQR 467
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
L GH++ V + S LI + S D +V++WD+ + H V +V FS
Sbjct: 468 TLEGHNDWVRSV---VFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFS 524
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
L S S D T+K+W D + E + H +NS++ +P+ L+
Sbjct: 525 HD-SRLLASASDDMTVKIW--DTATGSLENTLE--------GHDDRVNSVSFSPDSRLLA 573
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
+ S D T +W TF G R S+ FS ++ +A D T+KIW + S
Sbjct: 574 SASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSL 633
Query: 457 LKTFE 461
TF+
Sbjct: 634 RHTFD 638
Score = 144 (55.7 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 38/142 (26%), Positives = 65/142 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V +WD G + +GH V+S+ F PD+ LL S SDD TV++W
Sbjct: 536 DMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDS--RLLASASDDGTVKIWYAATGTVQH 593
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
T D S+A + + L SA D V +WD+ YS + T+++ + I
Sbjct: 594 TFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLR---HTFDLDHEIQRIQFDK 650
Query: 129 AFDSFLSSYNQQTIKKKRRSLE 150
+ S +++ + + + ++ E
Sbjct: 651 SMSSLITNVGRIQLDARSKATE 672
Score = 129 (50.5 bits), Expect = 9.0e-28, Sum P(3) = 9.0e-28
Identities = 31/82 (37%), Positives = 39/82 (47%)
Query: 21 FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSM 80
F FKGH V S+ F D+ LL S S D TV++WD TL+ H V S+
Sbjct: 254 FSPAQFKGHDRAVGSVSFSHDS--RLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSV 311
Query: 81 AITSDGSTLISAGRDKVVNLWD 102
+ D L SA D V +WD
Sbjct: 312 VFSHDSRLLASASDDGTVKIWD 333
Score = 45 (20.9 bits), Expect = 9.0e-28, Sum P(3) = 9.0e-28
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 554 RGQELENAVLDADYTK-AIQVAFELRRPHKLFELFASVC 591
+G+E+ +A+ D + IQ +++ PH+L E C
Sbjct: 1439 KGKEVPSALDTTDVLENIIQDRSQIKEPHQLAESIICKC 1477
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 271 (100.5 bits), Expect = 3.5e-27, Sum P(2) = 3.5e-27
Identities = 72/279 (25%), Positives = 129/279 (46%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 314
LA A+ +++D+ C +AGH+ V T G LI T SKD +V++W +
Sbjct: 224 LASASGDGDCRIWDVKLGQCLMNIAGHTNAV----TAVRWGGAGLIYTSSKDRTVKMWRA 279
Query: 315 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 374
+GH V +A S +D+ ++ F + D ++ ++L +
Sbjct: 280 ADGILCRTFSGHAHWVNNIALS-----------TDYVLRTGPFHPVKDRSKSHLSLSTEE 328
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 434
+ + K ++ +SLV S D T +WR V GH+ + V++SP
Sbjct: 329 LQESALKRYQAVCPDEVESLVSC-SDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDV 387
Query: 435 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
+++ +AS DK++++W SDG + TF GH +V ++ IVS D +K+W+V+
Sbjct: 388 KLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQ 447
Query: 495 TGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T + H D+++ + A+GG D ++ LW
Sbjct: 448 TKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 169 (64.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 58/266 (21%), Positives = 113/266 (42%)
Query: 278 LAGHSEIVLCL--DTCALSSGKILIVTGSKDNSVRLWDSE-SRCCVGVGTGHMGAVGAVA 334
L+GH + + CL + + + S D R+WD + +C + + GH AV AV
Sbjct: 200 LSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIA-GHTNAVTAVR 258
Query: 335 FSKKLQNFLVSGSSDHTIKVW-SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 393
+ + + S D T+K+W + DG+ + H +N++A++ D
Sbjct: 259 WGGA--GLIYTSSKDRTVKMWRAADGI-----------LCRTFSGHAHWVNNIALS-TDY 304
Query: 394 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQV--VITASGDKTIKIWSI 451
++ TG R +S+ T + + + D+V +++ S D T+ +W
Sbjct: 305 VLRTGPFHPVKD--RSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRN 362
Query: 452 SDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWA 511
+ C++ GH + V + I S D V+LW G+ +AT+ H ++
Sbjct: 363 NQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYT 422
Query: 512 LAVGKKTEMFATGGSDALVNLWHDST 537
+A + + +G D+ + +W T
Sbjct: 423 VAWSADSRLIVSGSKDSTLKVWSVQT 448
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 62/231 (26%), Positives = 106/231 (45%)
Query: 240 EEILDLKFLGEEEQYLAVATNIEQVQ-VYDLSSMS-CSYVLAGHSEIVLCLDTCALSSGK 297
E+ LDL + E V + Q Q V+ + ++ C+ + GH+E V+ L+ S
Sbjct: 79 EDTLDLASVDTEN----VIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLN---FSPDG 131
Query: 298 ILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 357
+ +GS D +VRLWD + TGH V V+++ + L SG +I +W
Sbjct: 132 AHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKR-LASGCKAGSIIIWD- 189
Query: 358 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP--NDS---LVCTGSQDRTACVWRLPDL 412
+ +Q K + + + H K IN LA P D + + S D +W +
Sbjct: 190 ---PETGQQ----KGRPL-SGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLG 241
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGH 463
++ GH + +V + ++ T+S D+T+K+W +DG +TF GH
Sbjct: 242 QCLMNIAGHTNAVTAVRWGGAG-LIYTSSKDRTVKMWRAADGILCRTFSGH 291
Score = 154 (59.3 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 42/151 (27%), Positives = 73/151 (48%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+V+ S DN++ LW + CV TGH V V +S ++ + S S D ++++W
Sbjct: 348 LVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVK-LIASASFDKSVRLWR--- 403
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
SD Q M A H + + ++A + + L+ +GS+D T VW +
Sbjct: 404 ASDG--QYM-----ATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELP 456
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
GH ++ V+++P V + DK IK+W+
Sbjct: 457 GHADEVFGVDWAPDGSRVASGGKDKVIKLWA 487
Score = 152 (58.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 86/376 (22%), Positives = 162/376 (43%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFK--GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
L G+ D V +WD++ T +F GHK V + + PD + L SG ++ +WD
Sbjct: 134 LASGSGDTTVRLWDLNTE--TPHFTCTGHKQWVLCVSWAPDGKR--LASGCKAGSIIIWD 189
Query: 61 L-LAKKCVATLDKHFSRVTSMAITS-----DGSTLISAGRDKVVNLWDLRDYSCKLTVPT 114
++ L H + +A + L SA D +WD++ C + +
Sbjct: 190 PETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAG 249
Query: 115 YEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKR-------RSLEIHFITVGERGIVRMWNA 167
+ AV A+ G A + SS +T+K R R+ H V + +
Sbjct: 250 H--TNAVTAVRWGGAGLIYTSS-KDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVL 306
Query: 168 DSACLY---EQKSSDVTISFE--MDDSKRGFTAATVLPSN-QGLLCVTADQQLLLYTTVE 221
+ + ++ S +++S E + + + + A V P + L+ + D L L+ +
Sbjct: 307 RTGPFHPVKDRSKSHLSLSTEELQESALKRYQA--VCPDEVESLVSCSDDNTLYLWRNNQ 364
Query: 222 VPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGH 281
K +E R+ G+ + D+K+ + + +A A+ + V+++ S GH
Sbjct: 365 --NKCVE-----RMTGHQNVVNDVKY-SPDVKLIASASFDKSVRLWRASDGQYMATFRGH 416
Query: 282 SEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN 341
+ V T A S+ LIV+GSKD+++++W +++ GH V V ++
Sbjct: 417 VQAVY---TVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSR 473
Query: 342 FLVSGSSDHTIKVWSF 357
+ SG D IK+W++
Sbjct: 474 -VASGGKDKVIKLWAY 488
Score = 129 (50.5 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 51/220 (23%), Positives = 96/220 (43%)
Query: 324 TGHMGAVGAVAFSKKLQNFL--VSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGK 381
T ++ VG K L++ L S +++ I + + + +P+ + + + H +
Sbjct: 63 TPYLFFVGEDEIKKSLEDTLDLASVDTENVIDI-VYQPQAVFKVRPVT-RCTSSMPGHAE 120
Query: 382 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 441
+ SL +P+ + + +GS D T +W L T GHK+ + V ++P + + AS
Sbjct: 121 AVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRL--AS 178
Query: 442 GDK--TIKIWSISDGSCL-KTFEGHTSSV--LRASFLTRGAQ---IVSCGADGLVKLWTV 493
G K +I IW G + GH + L R + + S DG ++W V
Sbjct: 179 GCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDV 238
Query: 494 RTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ G+C+ H + + A+ G ++ T D V +W
Sbjct: 239 KLGQCLMNIAGHTNAVTAVRWGGAGLIY-TSSKDRTVKMW 277
Score = 108 (43.1 bits), Expect = 3.5e-27, Sum P(2) = 3.5e-27
Identities = 29/81 (35%), Positives = 38/81 (46%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
CT GH V S+ F PD + L SGS D TVR+WDL + T H V ++
Sbjct: 111 CTSSMPGHAEAVVSLNFSPDG--AHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVS 168
Query: 82 ITSDGSTLISAGRDKVVNLWD 102
DG L S + + +WD
Sbjct: 169 WAPDGKRLASGCKAGSIIIWD 189
Score = 79 (32.9 bits), Expect = 3.8e-24, Sum P(2) = 3.8e-24
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCA 123
+C +++ H V S+ + DG+ L S D V LWDL + T ++ V V
Sbjct: 110 RCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSW 169
Query: 124 IPPGSAFDSFLSS-----YNQQTIKKKRRSLEIH 152
P G S + ++ +T ++K R L H
Sbjct: 170 APDGKRLASGCKAGSIIIWDPETGQQKGRPLSGH 203
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 244 (91.0 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 76/304 (25%), Positives = 141/304 (46%)
Query: 235 LVGYNEEILDLKF----LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L G+++ I L + E +Y+A ++ V+V+D ++ C +L GH++ V CL
Sbjct: 146 LAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 205
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
G L+ + S+D ++++W + GH V +A S L +G+ +
Sbjct: 206 ----GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA--LRTGAFEP 259
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR-L 409
+ L ++ LK +A+ + N + + LV +GS D T +W
Sbjct: 260 AEASINAQDLQGSLQE---LKDRAL-----RRYNLVRGQGPERLV-SGSDDFTLFMWSPA 310
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
D + GH+ I V FSP +++ +AS DK+IK+W G L + GH ++V +
Sbjct: 311 EDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQ 370
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
++ +VS +D +K+W V+ + A H D+++A+ + A+GG D
Sbjct: 371 IAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKC 430
Query: 530 VNLW 533
+ +W
Sbjct: 431 LRIW 434
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 95/421 (22%), Positives = 166/421 (39%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+T+K L A RV +C ++L+ H V S+A + G L S D V
Sbjct: 34 ETEKVLDIIYQPQAIFRV--RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRF 91
Query: 101 WDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGE- 158
WDL + T + V ++ P G S + Q + ++ + G
Sbjct: 92 WDLSTETPHFTCQGHRHWVLSISWSPDGKTLASGCKN-GQILLWDPSTGKQVGRVLAGHS 150
Query: 159 RGIVRM-W---NADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQL 214
+ I + W +A+ C Y SS S + D+ G + Q + C+
Sbjct: 151 KWITGLSWEPLHANPECRY-MASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG 209
Query: 215 LLYT-----TVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDL 269
LLY+ T++V + + +L + L G+ + + Y A+ T + +
Sbjct: 210 LLYSASQDRTIKV-WRAHDGVLCRTLQGHGHWVNTMAL---STDY-ALRTGAFEPAEASI 264
Query: 270 SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRCCVGVGTGHMG 328
++ L + L G +V+GS D ++ +W +E + + TGH
Sbjct: 265 NAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQA 324
Query: 329 AVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAV 388
+ V FS + S S D +IK+W DG + K A + H + +A
Sbjct: 325 LINQVLFSPD-SRIIASASFDKSIKLW--DGRTG--------KYLASLRGHVAAVYQIAW 373
Query: 389 APNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKI 448
+ + L+ +GS D T VW + GH +++V++SP Q V + DK ++I
Sbjct: 374 SADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 433
Query: 449 W 449
W
Sbjct: 434 W 434
Score = 151 (58.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 32/93 (34%), Positives = 49/93 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + +WD G +GH V I + D LL SGS D+T++VWD+ A+K A
Sbjct: 344 DKSIKLWDGRTGKYLASLRGHVAAVYQIAW--SADSRLLVSGSSDSTLKVWDVKAQKLAA 401
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
L H V ++ + DG + S G+DK + +W
Sbjct: 402 DLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 137 (53.3 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 38/131 (29%), Positives = 63/131 (48%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
+ GH ++ + S +I + S D S++LWD + + GH+ AV +A+S
Sbjct: 319 MTGHQALI---NQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 375
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 397
LVSGSSD T+KVW D Q K A + H ++ ++ +P+ V +
Sbjct: 376 D-SRLLVSGSSDSTLKVW------DVKAQ----KLAADLPGHADEVYAVDWSPDGQRVAS 424
Query: 398 GSQDRTACVWR 408
G +D+ +WR
Sbjct: 425 GGKDKCLRIWR 435
Score = 137 (53.3 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 38/165 (23%), Positives = 68/165 (41%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 438
H + + S+A +P + +GS D T W L T +GH+ + S+ +SP + +
Sbjct: 64 HSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLA 123
Query: 439 TASGDKTIKIWSISDGSCL-KTFEGHTSSVLRASFLTRGAQ-----IVSCGADGLVKLWT 492
+ + I +W S G + + GH+ + S+ A + S DG V++W
Sbjct: 124 SGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWD 183
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW--HD 535
G C H + L G +++ D + +W HD
Sbjct: 184 TTAGRCERILTGHTQSVTCLRWGGDGLLYSAS-QDRTIKVWRAHD 227
Score = 137 (53.3 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 65/316 (20%), Positives = 129/316 (40%)
Query: 11 KVLVWDVDGGFCT-HYFKGHKGVVSSILFHP---DTDKSLLFSGSDDATVRVWDLLAKKC 66
++L+WD G GH ++ + + P + + + S S D +VRVWD A +C
Sbjct: 130 QILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRC 189
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD-YSCKLTVPTYEMVEAVC--- 122
L H VT + DG L SA +D+ + +W D C+ V +
Sbjct: 190 ERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALST 248
Query: 123 --AIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDV 180
A+ G AF+ +S N Q ++ + L+ + +VR + S D
Sbjct: 249 DYALRTG-AFEPAEASINAQDLQGSLQELKDRALR--RYNLVRGQGPERLV---SGSDDF 302
Query: 181 TI-SFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLV--- 236
T+ + + K+ T + + + D +++ + + K + K L
Sbjct: 303 TLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLR 362
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 296
G+ + + + + + L ++ ++V+D+ + + L GH++ V +D G
Sbjct: 363 GHVAAVYQIAW-SADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP--DG 419
Query: 297 KILIVTGSKDNSVRLW 312
+ + +G KD +R+W
Sbjct: 420 Q-RVASGGKDKCLRIW 434
Score = 131 (51.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 36/127 (28%), Positives = 58/127 (45%)
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
+ GH + SV FSP + + + SGD T++ W +S + T +GH VL S+ G
Sbjct: 60 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 119
Query: 477 AQIVSCGADGLVKLWTVRTGE----CIATYDKHEDKI-WA-LAVGKKTEMFATGGSDALV 530
+ S +G + LW TG+ +A + K + W L + A+ D V
Sbjct: 120 KTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSV 179
Query: 531 NLWHDST 537
+W D+T
Sbjct: 180 RVW-DTT 185
Score = 129 (50.5 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 33/81 (40%), Positives = 42/81 (51%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
CT +GH V S+ F P T K L SGS D TVR WDL + T H V S++
Sbjct: 57 CTSSLEGHSEAVISVAFSP-TGKYLA-SGSGDTTVRFWDLSTETPHFTCQGHRHWVLSIS 114
Query: 82 ITSDGSTLISAGRDKVVNLWD 102
+ DG TL S ++ + LWD
Sbjct: 115 WSPDGKTLASGCKNGQILLWD 135
Score = 104 (41.7 bits), Expect = 7.8e-12, Sum P(2) = 7.8e-12
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V VWD G C GH V+ + + D LL+S S D T++VW
Sbjct: 176 DGSVRVWDTTAGRCERILTGHTQSVTCLRWGGD---GLLYSASQDRTIKVWRAHDGVLCR 232
Query: 69 TLDKHFSRVTSMAITSD 85
TL H V +MA+++D
Sbjct: 233 TLQGHGHWVNTMALSTD 249
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 243 (90.6 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 69/246 (28%), Positives = 115/246 (46%)
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
TC G+ I + S D ++R+WD++ C+ + GH V ++ S ++ L SG+ D
Sbjct: 273 TCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLST--EHVLRSGAYD 330
Query: 350 HT-IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR 408
HT K SF SD+ KAK A K V+ +D L +W
Sbjct: 331 HTDFKPKSF---SDERR-----KAKERYEACLKQSGERLVSASDDL--------QLILWD 374
Query: 409 LPDLVSVVT-FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV 467
+T GH++ + FSP + + TAS D ++++W G L T GH ++V
Sbjct: 375 PQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAV 434
Query: 468 LRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 527
+ ++ T +VS D +K+W VR+ + HED+++A+ + A+GG+D
Sbjct: 435 YQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGAD 494
Query: 528 ALVNLW 533
V +W
Sbjct: 495 KAVRIW 500
Score = 214 (80.4 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 58/211 (27%), Positives = 100/211 (47%)
Query: 274 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAV 333
C+ + GH ++ +S ++ VTGS D + RLWD +++ + GH V V
Sbjct: 126 CTASMNGHDGTIISAQFSPSTSSRL--VTGSGDFTARLWDCDTQTPIATMKGHTNWVSCV 183
Query: 334 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 393
A++ + + +GS D+TI+ W S + + K ++A + ++ LA
Sbjct: 184 AWAPDA-SIIATGSMDNTIRFWDPKKGSPIGDA-LRRHTKPIMALCWQPLH-LAPDSGPY 240
Query: 394 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
L+ +GS+D T +W + + T GH I V + + + ++S DKTI+IW D
Sbjct: 241 LLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIY-SSSYDKTIRIWDAKD 299
Query: 454 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGA 484
G CL +GH + V S T ++ GA
Sbjct: 300 GKCLHILKGHAARVNHLSLSTE--HVLRSGA 328
Score = 191 (72.3 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 89/369 (24%), Positives = 162/369 (43%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+ D +WD D KGH VS + + PD S++ +GS D T+R WD
Sbjct: 150 LVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDA--SIIATGSMDNTIRFWDPK 207
Query: 63 AKKCVA-TLDKHFSRVTSMA-----ITSD-GSTLISAG-RDKVVNLWDLRDYSCKLTVPT 114
+ L +H + ++ + D G L+++G +D V +W+++ + T+
Sbjct: 208 KGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSG 267
Query: 115 YEMVEAVCAIPPGSAFDSFLSSYNQQTIK----KKRRSLEI---HFITVGERGIVRMWNA 167
+ C G + + SSY++ TI+ K + L I H V +
Sbjct: 268 HT-APITCVRWGGQNW-IYSSSYDK-TIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVL 324
Query: 168 DSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKM 227
S + S E +K + A + S + L+ + D QL+L+ P+K
Sbjct: 325 RSGAYDHTDFKPKSFSDERRKAKERYEAC-LKQSGERLVSASDDLQLILWD----PQKST 379
Query: 228 ELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLC 287
+ I ++ G+ + + F + + +A A+ V+++D + L GH V
Sbjct: 380 KPIT--KMHGHQKVVNHASF-SPDGRCIATASFDSSVRLWDGKTGKFLATLRGH---VAA 433
Query: 288 LDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS 347
+ CA S+ L+V+ S+D ++++WD S+ GH V AV +S Q + SG
Sbjct: 434 VYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQR-VASGG 492
Query: 348 SDHTIKVWS 356
+D +++WS
Sbjct: 493 ADKAVRIWS 501
Score = 189 (71.6 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 59/223 (26%), Positives = 102/223 (45%)
Query: 316 SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAV 375
+RC + GH G + + FS + LV+GS D T ++W D + P+ A
Sbjct: 124 TRCTASMN-GHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCD-----TQTPI-----AT 172
Query: 376 VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV--TFRGHKRGI----WS-V 428
+ H ++ +A AP+ S++ TGS D T W P S + R H + I W +
Sbjct: 173 MKGHTNWVSCVAWAPDASIIATGSMDNTIRFWD-PKKGSPIGDALRRHTKPIMALCWQPL 231
Query: 429 EFSPVDQVVITASG--DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ--IVSCGA 484
+P + ASG D T++IW++ + L T GHT+ + + G Q I S
Sbjct: 232 HLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRW---GGQNWIYSSSY 288
Query: 485 DGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 527
D +++W + G+C+ H ++ L++ + + +G D
Sbjct: 289 DKTIRIWDAKDGKCLHILKGHAARVNHLSLSTE-HVLRSGAYD 330
Score = 146 (56.5 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 37/152 (24%), Positives = 68/152 (44%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG--KDINSLAVAPNDSLVCTGSQ 400
LVS S D + +W D ++ K + HG K +N + +P+ + T S
Sbjct: 361 LVSASDDLQLILW-------DPQK----STKPITKMHGHQKVVNHASFSPDGRCIATASF 409
Query: 401 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 460
D + +W + T RGH ++ +S ++++++S D T+K+W +
Sbjct: 410 DSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDL 469
Query: 461 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
GH V + G ++ S GAD V++W+
Sbjct: 470 PGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 139 (54.0 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 40/172 (23%), Positives = 74/172 (43%)
Query: 371 KAKAVVAAHGKDINSLAVAPN-DSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
+ A + H I S +P+ S + TGS D TA +W + T +GH + V
Sbjct: 125 RCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVA 184
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCL-KTFEGHTSSVLRASFLT------RGAQIVSC 482
++P ++ T S D TI+ W GS + HT ++ + G +++
Sbjct: 185 WAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLAS 244
Query: 483 GA-DGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
G+ D V++W V+ + T H I + G + ++++ D + +W
Sbjct: 245 GSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSS-YDKTIRIW 295
Score = 134 (52.2 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
CT GH G + S F P T S L +GS D T R+WD + +AT+ H + V+ +A
Sbjct: 126 CTASMNGHDGTIISAQFSPSTS-SRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVA 184
Query: 82 ITSDGSTLISAGRDKVVNLWD 102
D S + + D + WD
Sbjct: 185 WAPDASIIATGSMDNTIRFWD 205
Score = 124 (48.7 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 35/122 (28%), Positives = 63/122 (51%)
Query: 284 IVLCLDTCALS--SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN 341
+ LC L+ SG L+ +GSKDN+VR+W+ + R + +GH + V + QN
Sbjct: 224 MALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGG--QN 281
Query: 342 FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQD 401
++ S S D TI++W DA+ K ++ H +N L+++ + ++ +G+ D
Sbjct: 282 WIYSSSYDKTIRIW-------DAKDG---KCLHILKGHAARVNHLSLS-TEHVLRSGAYD 330
Query: 402 RT 403
T
Sbjct: 331 HT 332
Score = 120 (47.3 bits), Expect = 0.00082, P = 0.00082
Identities = 35/128 (27%), Positives = 58/128 (45%)
Query: 417 TFRGHKRGIWSVEFSP-VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 475
+ GH I S +FSP ++T SGD T ++W + + T +GHT+ V ++
Sbjct: 129 SMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAP- 187
Query: 476 GAQIVSCGA-DGLVKLWTVRTGECIA-TYDKHEDKIWAL-------AVGKKTEMFATGGS 526
A I++ G+ D ++ W + G I +H I AL A + A+G
Sbjct: 188 DASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSK 247
Query: 527 DALVNLWH 534
D V +W+
Sbjct: 248 DNTVRIWN 255
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 246 (91.7 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 69/288 (23%), Positives = 128/288 (44%)
Query: 248 LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDN 307
+ E +YLA A+ ++++D C +L GH++ V TC G L+ + S+D
Sbjct: 225 INPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSV----TCVKWGGDGLLYSSSQDR 280
Query: 308 SVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 367
++++W S+ GH V +A S +D+ ++ +F+ ++ P
Sbjct: 281 TIKVWRSQDGILCRTLQGHAHWVNTMALS-----------TDYVLRTGAFEP-AEATINP 328
Query: 368 MNLKAK-AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR-LPDLVSVVTFRGHKRGI 425
++ A + + + +GS D T +WR D + GH+ I
Sbjct: 329 QDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALI 388
Query: 426 WSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD 485
V FSP +++ +AS DK+IK+W G L + GH S+V + ++ +VS +D
Sbjct: 389 NQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSD 448
Query: 486 GLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+K+W T + H D+++A + A+GG D + +W
Sbjct: 449 STLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 209 (78.6 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 72/307 (23%), Positives = 134/307 (43%)
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYD-LSSMSCSYVLAGHSEIVLCL--DTCAL 293
G+ +L + + + ++ LA Q+ ++D + VL GHS+ + CL + +
Sbjct: 167 GHRHWVLSIAWSPDGKK-LASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHI 225
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
+ + + SKD S+R+WD+ C + TGH +V V + L S S D TIK
Sbjct: 226 NPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGG--DGLLYSSSQDRTIK 283
Query: 354 VW-SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
VW S DG+ Q H +N++A++ D ++ TG+ + D+
Sbjct: 284 VWRSQDGILCRTLQ-----------GHAHWVNTMALS-TDYVLRTGAFEPAEATINPQDM 331
Query: 413 V-SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS-ISDGSCLKTFEGHTSSVLRA 470
S+ + + + + +++ S D T+ +W D L+ GH + + +
Sbjct: 332 SGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQV 391
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 530
F I S D +KLW RTG+ + + H ++ +A + + +G SD+ +
Sbjct: 392 LFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTL 451
Query: 531 NLWHDST 537
+W T
Sbjct: 452 KVWDAET 458
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 76/304 (25%), Positives = 134/304 (44%)
Query: 243 LDLKFLGEEEQYLAVATNIEQVQ-VYDLSSMS-CSYVLAGHSEIVLCLDTCALS-SGKIL 299
L+ G+ + V I Q Q V+ + +++ C+ L GH+E V+ + A S +GK L
Sbjct: 86 LEKTLAGQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHTEAVISV---AFSPTGKYL 142
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+GS D +VR WD + GH V ++A+S + L SG + I +W
Sbjct: 143 -ASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKK-LASGCKNSQIFLW---- 196
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLA-----VAPNDSLVCTGSQDRTACVWR--LPDL 412
D A N + V+ H K I L + P + + S+D + +W +
Sbjct: 197 --DPATG--NQIGR-VLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRC 251
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 472
++T GH + + V++ D ++ ++S D+TIK+W DG +T +GH V +
Sbjct: 252 DKILT--GHTQSVTCVKWGG-DGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMAL 308
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI---WALAVGKKTEMFATGGSDAL 529
T ++ GA + T+ + + + +DK + G+ E +G D
Sbjct: 309 STD--YVLRTGAFEPAEA-TINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFT 365
Query: 530 VNLW 533
+ LW
Sbjct: 366 LFLW 369
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 86/372 (23%), Positives = 157/372 (42%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D V WD+ KGH+ V SI + PD K L SG ++ + +WD
Sbjct: 142 LASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKK--LASGCKNSQIFLWDPA 199
Query: 63 AKKCVA-TLDKHFSRVTSMA-----ITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
+ L H +T + I + L SA +D + +WD C + +
Sbjct: 200 TGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGH- 258
Query: 117 MVEAVCAIPPGSAFDSFLSSYNQ-QTIKKKR-------RSLEIHFITVGERGIVRMWNAD 168
++V + G D L S +Q +TIK R R+L+ H V + +
Sbjct: 259 -TQSVTCVKWGG--DGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLR 315
Query: 169 SACLYEQKSS----DVTISF-EMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVP 223
+ +++ D++ S E+ D + + L+ + D L L+ E
Sbjct: 316 TGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAE-D 374
Query: 224 EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSE 283
+K +E R+ G+ I + F + + +A A+ + +++++ + L GH
Sbjct: 375 KKPLE-----RMTGHQALINQVLF-SPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVS 428
Query: 284 IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFL 343
V + A S+ L+V+GS D+++++WD+E++ GH V A +S Q +
Sbjct: 429 AVYQI---AWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQR-V 484
Query: 344 VSGSSDHTIKVW 355
SG D +++W
Sbjct: 485 ASGGKDKCLRIW 496
Score = 129 (50.5 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 37/131 (28%), Positives = 62/131 (47%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
+ GH ++ + S +I + S D S++LW+ + + GH+ AV +A+S
Sbjct: 381 MTGHQALI---NQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSA 437
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 397
LVSGSSD T+KVW DAE K + H ++ + +P+ V +
Sbjct: 438 D-SRLLVSGSSDSTLKVW-------DAETK---KLAIDLPGHADEVFATDWSPDGQRVAS 486
Query: 398 GSQDRTACVWR 408
G +D+ +WR
Sbjct: 487 GGKDKCLRIWR 497
Score = 127 (49.8 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 33/81 (40%), Positives = 41/81 (50%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
CT +GH V S+ F P T K L SGS D TVR WDL + T H V S+A
Sbjct: 119 CTSSLEGHTEAVISVAFSP-TGKYLA-SGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIA 176
Query: 82 ITSDGSTLISAGRDKVVNLWD 102
+ DG L S ++ + LWD
Sbjct: 177 WSPDGKKLASGCKNSQIFLWD 197
Score = 77 (32.2 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 25/93 (26%), Positives = 38/93 (40%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+T+K L A RV +C ++L+ H V S+A + G L S D V
Sbjct: 96 ETEKVLDIIYQPQAVFRV--RAVTRCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRF 153
Query: 101 WDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDS 132
WDL + + T + V ++ P G S
Sbjct: 154 WDLSTETPQFTAKGHRHWVLSIAWSPDGKKLAS 186
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 249 (92.7 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 75/311 (24%), Positives = 141/311 (45%)
Query: 229 LILSKRLVGYNEEILDLKF----LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEI 284
L + + L G+++ I L + + E +Y+A ++ V+V+D ++ C +L GH++
Sbjct: 189 LQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQS 248
Query: 285 VLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLV 344
V CL G L+ + S+D ++++W + GH V +A S
Sbjct: 249 VTCLRW----GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS-------- 296
Query: 345 SGSSDHTIKVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRT 403
+D+ ++ +F+ Q + K + N + + LV +GS D T
Sbjct: 297 ---TDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLV-SGSDDFT 352
Query: 404 ACVWR-LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
+W D + GH+ I V FSP ++V +AS DK+IK+W G L + G
Sbjct: 353 LFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRG 412
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFA 522
H ++V + ++ +VS +D +K+W V+ + H D+++A+ + A
Sbjct: 413 HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVA 472
Query: 523 TGGSDALVNLW 533
+GG D + +W
Sbjct: 473 SGGKDKCLRIW 483
Score = 153 (58.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 84/340 (24%), Positives = 145/340 (42%)
Query: 220 VEVPEKKMELILSKRLVGYNEEILDLKF----------LGEEEQYLAVATN-----IEQV 264
V++ K++L+ + L EE L L F LG+ + +V T I Q
Sbjct: 37 VDITPDKLQLVCNALLA--QEEPLPLAFYVHDAEIVSSLGKTLESQSVETEKIVDIIYQP 94
Query: 265 Q-VYDLSSMS-CSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSVRLWDSESRCCVG 321
Q V+ + +++ C+ L GHSE V+ + A S +GK L +GS D +VR WD +
Sbjct: 95 QAVFRVRAVTRCTSSLEGHSEAVISV---AFSPTGKYL-ASGSGDTTVRFWDLSTETPHF 150
Query: 322 VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGK 381
GH V ++++S + L SG + + +W + L+ + H K
Sbjct: 151 TCKGHRHWVLSISWSPDGKK-LASGCKNGQVLLW---------DPSTGLQVGRTLTGHSK 200
Query: 382 DINSLA-----VAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQV 436
I L+ + P V + S+D + VW GH + + + + D +
Sbjct: 201 WITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG-DGL 259
Query: 437 VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 496
+ +AS D+TIK+W DG +T +GH V + T A + GA + TV
Sbjct: 260 LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA--LRTGAFEPAEA-TVNAQ 316
Query: 497 ECIATYDKHEDKI---WALAVGKKTEMFATGGSDALVNLW 533
+ + + +++ + L G+ E +G D + LW
Sbjct: 317 DLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLW 356
Score = 152 (58.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 92/374 (24%), Positives = 164/374 (43%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYF-KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
L G+ D V WD+ H+ KGH+ V SI + PD K L SG + V +WD
Sbjct: 129 LASGSGDTTVRFWDLSTE-TPHFTCKGHRHWVLSISWSPDGKK--LASGCKNGQVLLWDP 185
Query: 62 LAKKCVA-TLDKHFSRVTSMA-----ITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY 115
V TL H +T ++ + + + S+ +D V +WD C+ + +
Sbjct: 186 STGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGH 245
Query: 116 EMVEAVCAIPPGSAFDSFLSSYNQ-QTIKKKR-------RSLEIHFITVGERGIVRMWNA 167
++V + G D L S +Q +TIK R R+L+ H V + +
Sbjct: 246 --TQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301
Query: 168 DSACLYEQKSSDVT---ISFEMDDSKRGFTAATVLPSNQG---LLCVTADQQLLLYTTVE 221
+ +E + V + + + K ++ L QG L+ + D L L++ E
Sbjct: 302 RTGA-FEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAE 360
Query: 222 VPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGH 281
+KK L+ R+ G+ I + F + + +A A+ + ++++D + L GH
Sbjct: 361 --DKKP---LA-RMTGHQALINQVLF-SPDSRIVASASFDKSIKLWDGRTGKYLASLRGH 413
Query: 282 SEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN 341
V + A S+ L+V+GS D+++++WD +++ GH V AV +S Q
Sbjct: 414 ---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQR 470
Query: 342 FLVSGSSDHTIKVW 355
+ SG D +++W
Sbjct: 471 -VASGGKDKCLRIW 483
Score = 138 (53.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 47/170 (27%), Positives = 78/170 (45%)
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT-FRGHKRGIWSVEFSPV 433
+V++ GK + S +V + +V Q + V+R+ + + GH + SV FSP
Sbjct: 69 IVSSLGKTLESQSVE-TEKIVDIIYQPQA--VFRVRAVTRCTSSLEGHSEAVISVAFSPT 125
Query: 434 DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 493
+ + + SGD T++ W +S + T +GH VL S+ G ++ S +G V LW
Sbjct: 126 GKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDP 185
Query: 494 RTGECIA-TYDKHEDKI----WA-LAVGKKTEMFATGGSDALVNLWHDST 537
TG + T H I W L + + A+ D V +W D+T
Sbjct: 186 STGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW-DTT 234
Score = 132 (51.5 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 36/131 (27%), Positives = 62/131 (47%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
+ GH ++ + S ++ + S D S++LWD + + GH+ AV +A+S
Sbjct: 368 MTGHQALI---NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 397
LVSGSSD T+KVW D Q K + H ++ ++ +P+ V +
Sbjct: 425 D-SRLLVSGSSDSTLKVW------DVKAQ----KLATDLPGHADEVYAVDWSPDGQRVAS 473
Query: 398 GSQDRTACVWR 408
G +D+ +WR
Sbjct: 474 GGKDKCLRIWR 484
Score = 123 (48.4 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 33/81 (40%), Positives = 41/81 (50%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
CT +GH V S+ F P T K L SGS D TVR WDL + T H V S++
Sbjct: 106 CTSSLEGHSEAVISVAFSP-TGKYLA-SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSIS 163
Query: 82 ITSDGSTLISAGRDKVVNLWD 102
+ DG L S ++ V LWD
Sbjct: 164 WSPDGKKLASGCKNGQVLLWD 184
Score = 73 (30.8 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD----YSCK 109
+C ++L+ H V S+A + G L S D V WDL ++CK
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCK 153
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 248 (92.4 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
Identities = 74/309 (23%), Positives = 140/309 (45%)
Query: 231 LSKRLVGYNEEILDLKF----LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVL 286
+ + L G+++ I L + + E +Y+A ++ V+V+D ++ C +L GH++ V
Sbjct: 193 VGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT 252
Query: 287 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
CL G L+ + S+D ++++W + GH V +A S
Sbjct: 253 CLRW----GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS---------- 298
Query: 347 SSDHTIKVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 405
+D+ ++ +F+ Q + K + N + + LV +GS D T
Sbjct: 299 -TDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLV-SGSDDFTLF 356
Query: 406 VWR-LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
+W D + GH+ I V FSP ++V +AS DK+IK+W G L + GH
Sbjct: 357 LWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHV 416
Query: 465 SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 524
++V + ++ +VS +D +K+W V+ + H D+++A+ + A+G
Sbjct: 417 AAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASG 476
Query: 525 GSDALVNLW 533
G D + +W
Sbjct: 477 GKDKCLRIW 485
Score = 181 (68.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 80/315 (25%), Positives = 137/315 (43%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G++E ++ + F +YLA + V+ +DLS+ + + GH VL +
Sbjct: 112 LEGHSEAVISVAF-SPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSP-- 168
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVG-VGTGHMGAVGAVAFSKKLQN----FLVSGSSD 349
GK L +G K+ + LWD + VG TGH + +++ N ++ S S D
Sbjct: 169 DGKKL-ASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKD 227
Query: 350 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
+++VW D + E+ ++ H + + L D L+ + SQDRT VWR
Sbjct: 228 GSVRVW--DTTAGRCER--------ILTGHTQSVTCLRWG-GDGLLYSASQDRTIKVWRA 276
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS---GDKTIKIWSISDGSCLKTFEGHTSS 466
D V T +GH + ++ S D + T + + T+ + GS LK + SS
Sbjct: 277 HDGVLCRTLQGHGHWVNTMALS-TDYALRTGAFEPAEATVNAQDLQ-GS-LKELKERASS 333
Query: 467 VLRASFLTRGA---QIVSCGADGLVKLWT-VRTGECIATYDKHEDKIWALAVGKKTEMFA 522
R + L RG ++VS D + LW+ + +A H+ I + + + A
Sbjct: 334 --RYN-LVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVA 390
Query: 523 TGGSDALVNLWHDST 537
+ D + LW T
Sbjct: 391 SASFDKSIKLWDGRT 405
Score = 153 (58.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 66/264 (25%), Positives = 112/264 (42%)
Query: 274 CSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGA 332
C+ L GHSE V+ + A S +GK L +GS D +VR WD + GH V +
Sbjct: 108 CTSSLEGHSEAVISV---AFSPTGKYL-ASGSGDTTVRFWDLSTETPHFTCKGHRHWVLS 163
Query: 333 VAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND 392
+++S + L SG + I +W + + +K + G L + P
Sbjct: 164 ISWSPDGKK-LASGCKNGQILLWD-PSTGTQVGRTLTGHSKWIT---GLSWEPLHMNPEC 218
Query: 393 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
V + S+D + VW GH + + + + D ++ +AS D+TIK+W
Sbjct: 219 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG-DGLLYSASQDRTIKVWRAH 277
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI--- 509
DG +T +GH V + T A + GA + TV + + + +++
Sbjct: 278 DGVLCRTLQGHGHWVNTMALSTDYA--LRTGAFEPAEA-TVNAQDLQGSLKELKERASSR 334
Query: 510 WALAVGKKTEMFATGGSDALVNLW 533
+ L G+ E +G D + LW
Sbjct: 335 YNLVRGQGPERLVSGSDDFTLFLW 358
Score = 152 (58.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 91/374 (24%), Positives = 164/374 (43%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYF-KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
L G+ D V WD+ H+ KGH+ V SI + PD K L SG + + +WD
Sbjct: 131 LASGSGDTTVRFWDLSTE-TPHFTCKGHRHWVLSISWSPDGKK--LASGCKNGQILLWDP 187
Query: 62 LAKKCVA-TLDKHFSRVTSMA-----ITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY 115
V TL H +T ++ + + + S+ +D V +WD C+ + +
Sbjct: 188 STGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGH 247
Query: 116 EMVEAVCAIPPGSAFDSFLSSYNQ-QTIKKKR-------RSLEIHFITVGERGIVRMWNA 167
++V + G D L S +Q +TIK R R+L+ H V + +
Sbjct: 248 --TQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 303
Query: 168 DSACLYEQKSSDVT---ISFEMDDSKRGFTAATVLPSNQG---LLCVTADQQLLLYTTVE 221
+ +E + V + + + K ++ L QG L+ + D L L++ E
Sbjct: 304 RTGA-FEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAE 362
Query: 222 VPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGH 281
+KK L+ R+ G+ I + F + + +A A+ + ++++D + L GH
Sbjct: 363 --DKKP---LA-RMTGHQALINQVLF-SPDSRIVASASFDKSIKLWDGRTGKYLASLRGH 415
Query: 282 SEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN 341
V + A S+ L+V+GS D+++++WD +++ GH V AV +S Q
Sbjct: 416 ---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQR 472
Query: 342 FLVSGSSDHTIKVW 355
+ SG D +++W
Sbjct: 473 -VASGGKDKCLRIW 485
Score = 139 (54.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 46/170 (27%), Positives = 78/170 (45%)
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT-FRGHKRGIWSVEFSPV 433
+V++ GK + S +V + +V Q + V+R+ + + GH + SV FSP
Sbjct: 71 IVSSLGKTLESQSVE-TEKIVDIIYQPQA--VFRVRAVTRCTSSLEGHSEAVISVAFSPT 127
Query: 434 DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 493
+ + + SGD T++ W +S + T +GH VL S+ G ++ S +G + LW
Sbjct: 128 GKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDP 187
Query: 494 RTGECIA-TYDKHEDKI----WA-LAVGKKTEMFATGGSDALVNLWHDST 537
TG + T H I W L + + A+ D V +W D+T
Sbjct: 188 STGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW-DTT 236
Score = 132 (51.5 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 36/131 (27%), Positives = 62/131 (47%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
+ GH ++ + S ++ + S D S++LWD + + GH+ AV +A+S
Sbjct: 370 MTGHQALI---NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 426
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 397
LVSGSSD T+KVW D Q K + H ++ ++ +P+ V +
Sbjct: 427 D-SRLLVSGSSDSTLKVW------DVKAQ----KLTTDLPGHADEVYAVDWSPDGQRVAS 475
Query: 398 GSQDRTACVWR 408
G +D+ +WR
Sbjct: 476 GGKDKCLRIWR 486
Score = 122 (48.0 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
Identities = 32/81 (39%), Positives = 41/81 (50%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
CT +GH V S+ F P T K L SGS D TVR WDL + T H V S++
Sbjct: 108 CTSSLEGHSEAVISVAFSP-TGKYLA-SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSIS 165
Query: 82 ITSDGSTLISAGRDKVVNLWD 102
+ DG L S ++ + LWD
Sbjct: 166 WSPDGKKLASGCKNGQILLWD 186
Score = 73 (30.8 bits), Expect = 7.3e-21, Sum P(2) = 7.3e-21
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD----YSCK 109
+C ++L+ H V S+A + G L S D V WDL ++CK
Sbjct: 107 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCK 155
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 245 (91.3 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 71/309 (22%), Positives = 141/309 (45%)
Query: 231 LSKRLVGYNEEILDLKF----LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVL 286
+ + L G+++ I L + E +Y+A ++ V+++D ++ C +L GH++ V
Sbjct: 191 VGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVT 250
Query: 287 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
CL G L+ + S+D ++++W + GH V +A S
Sbjct: 251 CLRW----GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS---------- 296
Query: 347 SSDHTIKVWSFDGLSDDAEQPMNLKAKAV-VAAHGKDINSLAVAPNDSLVCTGSQDRTAC 405
+D+ ++ +F+ ++ + P +L+ + +L + +GS D T
Sbjct: 297 -TDYALRTGAFEP-AEASVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLF 354
Query: 406 VWR-LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
+W D + GH+ I V FSP ++V +AS DK+IK+W G L + GH
Sbjct: 355 LWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHV 414
Query: 465 SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 524
++V + ++ +VS +D +K+W V+ + H D+++A+ + A+G
Sbjct: 415 AAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASG 474
Query: 525 GSDALVNLW 533
G D + +W
Sbjct: 475 GKDKCLRIW 483
Score = 191 (72.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 100/424 (23%), Positives = 169/424 (39%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+T+K L A RV +C ++L+ H V S+A + G L S D V
Sbjct: 83 ETEKVLDIIYQPQAIFRV--RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRF 140
Query: 101 WDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSS-----YNQQTIKKKRRSLEIHFI 154
WDL + T + V ++ P G S + ++ T K+ R+L H
Sbjct: 141 WDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSK 200
Query: 155 TVGERGIVRMW---NADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTAD 211
+ G+ W +A+ C Y SS S + D+ G + Q + C+
Sbjct: 201 WI--TGL--SWEPLHANPECRYVASSSKDG-SVRIWDTTAGRCERILTGHTQSVTCLRWG 255
Query: 212 QQLLLYT-----TVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQV 266
LLY+ T++V + + +L + L G+ + + Y A+ T +
Sbjct: 256 GDGLLYSASQDRTIKV-WRAHDGVLCRTLQGHGHWVNTMAL---STDY-ALRTGAFEPAE 310
Query: 267 YDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRCCVGVGTG 325
++ L E L G +V+GS D ++ LW +E + + TG
Sbjct: 311 ASVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTG 370
Query: 326 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 385
H + V FS + S S D +IK+W DG + K A + H +
Sbjct: 371 HQALINQVLFSPD-SRIVASASFDKSIKLW--DGRTG--------KYLASLRGHVAAVYQ 419
Query: 386 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 445
+A + + L+ +GS D T VW + + GH +++V++SP Q V + DK
Sbjct: 420 IAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKC 479
Query: 446 IKIW 449
++IW
Sbjct: 480 LRIW 483
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 92/374 (24%), Positives = 163/374 (43%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYF-KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
L G+ D V WD+ H+ KGH+ V SI + PD K L SG + + +WD
Sbjct: 129 LASGSGDTTVRFWDLSTE-TPHFTCKGHRHWVLSISWSPDGRK--LASGCKNGQILLWDP 185
Query: 62 LAKKCVA-TLDKHFSRVTSMA-----ITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY 115
K V TL H +T ++ + + S+ +D V +WD C+ + +
Sbjct: 186 STGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGH 245
Query: 116 EMVEAVCAIPPGSAFDSFLSSYNQ-QTIKKKR-------RSLEIHFITVGERGIVRMWNA 167
++V + G D L S +Q +TIK R R+L+ H V + +
Sbjct: 246 --TQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301
Query: 168 DSACLYEQKSSDVT---ISFEMDDSKRGFTAATVLPSNQG---LLCVTADQQLLLYTTVE 221
+ +E + V + + + K + L QG L+ + D L L++ E
Sbjct: 302 RTGA-FEPAEASVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAE 360
Query: 222 VPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGH 281
+KK L+ R+ G+ I + F + + +A A+ + ++++D + L GH
Sbjct: 361 --DKKP---LT-RMTGHQALINQVLF-SPDSRIVASASFDKSIKLWDGRTGKYLASLRGH 413
Query: 282 SEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN 341
V + A S+ L+V+GS D+++++WD +++ GH V AV +S Q
Sbjct: 414 ---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQR 470
Query: 342 FLVSGSSDHTIKVW 355
+ SG D +++W
Sbjct: 471 -VASGGKDKCLRIW 483
Score = 138 (53.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 45/170 (26%), Positives = 78/170 (45%)
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT-FRGHKRGIWSVEFSPV 433
+V++ GK + S AV + ++ Q + ++R+ + + GH + SV FSP
Sbjct: 69 IVSSLGKTLESQAVE-TEKVLDIIYQPQA--IFRVRAVTRCTSSLEGHSEAVISVAFSPT 125
Query: 434 DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 493
+ + + SGD T++ W +S + T +GH VL S+ G ++ S +G + LW
Sbjct: 126 GKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDP 185
Query: 494 RTGECIA-TYDKHEDKI----WA-LAVGKKTEMFATGGSDALVNLWHDST 537
TG+ + T H I W L + A+ D V +W D+T
Sbjct: 186 STGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIW-DTT 234
Score = 132 (51.5 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
+ GH ++ + S ++ + S D S++LWD + + GH+ AV +A+S
Sbjct: 368 MTGHQALI---NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 397
LVSGSSD T+KVW D Q + + + H ++ ++ +P+ V +
Sbjct: 425 D-SRLLVSGSSDSTLKVW------DVKAQKLAMD----LPGHADEVYAVDWSPDGQRVAS 473
Query: 398 GSQDRTACVWR 408
G +D+ +WR
Sbjct: 474 GGKDKCLRIWR 484
Score = 121 (47.7 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 32/81 (39%), Positives = 41/81 (50%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
CT +GH V S+ F P T K L SGS D TVR WDL + T H V S++
Sbjct: 106 CTSSLEGHSEAVISVAFSP-TGKYLA-SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSIS 163
Query: 82 ITSDGSTLISAGRDKVVNLWD 102
+ DG L S ++ + LWD
Sbjct: 164 WSPDGRKLASGCKNGQILLWD 184
>UNIPROTKB|G4MTR1 [details] [associations]
symbol:MGG_04746 "DOM34-interacting protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR007148 Pfam:PF04003 KO:K14556 RefSeq:XP_003713707.1
ProteinModelPortal:G4MTR1 EnsemblFungi:MGG_04746T0 GeneID:2678069
KEGG:mgr:MGG_04746 Uniprot:G4MTR1
Length = 968
Score = 322 (118.4 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 144/569 (25%), Positives = 243/569 (42%)
Query: 2 FALLEGADRKVLVWDVDGGFC--THYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 59
F L D + +WD+ FC TH + + G ++ +PD S + +D ++VW
Sbjct: 189 FLLTTAKDSLIKLWDLSSRFCIETHVAQTN-GECWALGVNPDF--SCCVTAGNDGELKVW 245
Query: 60 --DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL--WDLRDYSCKLTVPTY 115
DL+A +T + S + I D TL +D+ V + RDY V
Sbjct: 246 FIDLVALLS-STREVEVSHMGK--ILRDRGTLHRQSKDRAVEVRFHPRRDY---FAVHGI 299
Query: 116 EMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQ 175
E + I G+ L+ K+KRR + E+ + +AD A +
Sbjct: 300 EKSVEIWRIRSGAEVKKALAR------KRKRRREKQGAKGDAEKDVKE--DADEAA-DDI 350
Query: 176 KSSDVTISFEMDDSKR--GFTAATVLPSNQG-----LLCVTADQQLLLY--TTVEVPEKK 226
+DV+ F + R G T + G L+ T + Q+ L+ TT + EKK
Sbjct: 351 SKADVSDIFVLLVIVRTTGKTRSVDWALTHGTKDLQLVVGTTNNQIELWHVTTTKDKEKK 410
Query: 227 MEL--------ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVL 278
+ LS L G+ +I + L +++ LA A N ++++++ + +C
Sbjct: 411 SKKENAEDYTRALSIELPGHRADIRAIA-LSSDDRMLATAAN-GSLKIWNVRTQACIRTF 468
Query: 279 -AGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
G++ LC CA G ++V G+K + L+D S + T H GA+ ++
Sbjct: 469 ECGYA---LC---CAFLPGDKVVVVGTKTGELELFDVASTALLDSVTAHDGAIWSLHVHP 522
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL--KAKAV---VAAHGKDINSLAVAPND 392
++ +V+GS+D + K W F + + K K V V DI SL +P+
Sbjct: 523 DGRS-VVTGSADKSAKFWDFRIVQEPVLGTTRTTPKLKLVQTRVLKVSDDILSLKFSPDA 581
Query: 393 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
++ D T V+ L + GHK + S++ S +++IT+S DK IKIW +
Sbjct: 582 KMLAVALLDSTVKVFFADSLKLYLNLYGHKLPVLSMDISYDSKLIITSSADKNIKIWGLD 641
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQ-----IVSCGADGLVKLWTVRTGECIATYDKHED 507
G C K+ GH SVL+ +F+ A+ S D ++K W E I H
Sbjct: 642 FGDCHKSLFGHQDSVLQVAFIPHNAEGNGHHFFSTSKDRVIKYWDGDKFEQIQRLHGHHG 701
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDS 536
++WALAV + D + +W ++
Sbjct: 702 EVWALAVSHSGNFIVSASHDKSIRVWEET 730
Score = 144 (55.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 57/274 (20%), Positives = 110/274 (40%)
Query: 4 LLEGADRKVLVWDVDGGFCTHYFKGHKGVVS-SILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ A+ +VL WDV G ++ K + + TD+ + G +D ++R+WD
Sbjct: 39 VVTAANEEVLCWDVKKGELLSRWQDEKSKAQVTAIAQSKTDRDVFAVGYEDGSIRLWDSK 98
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAV 121
+ + + H + +T +A G+ L S +D V +WDL + + + + + +
Sbjct: 99 IATIIVSFNGHRTAITHLAFDKSGTRLASGSKDTDVIVWDLVAEVGQYKLRGHKDQITGL 158
Query: 122 CAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVT 181
C I P + Q + E +T + ++++W+ S E +
Sbjct: 159 CFIEPEPQTAEQEDAEEAQAMVVDNEGSEGFLLTTAKDSLIKLWDLSSRFCIETHVAQTN 218
Query: 182 ISFEMDDSKRGFTAATVLPSNQGLLCVT-ADQQLLLYTTVEVPEKKMELILSKRLVGYNE 240
F+ V N G L V D LL +T EV M IL R + +
Sbjct: 219 GECWALGVNPDFSCC-VTAGNDGELKVWFIDLVALLSSTREVEVSHMGKILRDRGTLHRQ 277
Query: 241 E---ILDLKFLGEEEQYLAVATNIEQVQVYDLSS 271
++++F + Y AV + V+++ + S
Sbjct: 278 SKDRAVEVRFHPRRD-YFAVHGIEKSVEIWRIRS 310
Score = 133 (51.9 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 4 LLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL---LFSGSDDATVRVWD 60
+ AD+ + +W +D G C GH+ V + F P + FS S D ++ WD
Sbjct: 627 ITSSADKNIKIWGLDFGDCHKSLFGHQDSVLQVAFIPHNAEGNGHHFFSTSKDRVIKYWD 686
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
+ + L H V ++A++ G+ ++SA DK + +W+ D
Sbjct: 687 GDKFEQIQRLHGHHGEVWALAVSHSGNFIVSASHDKSIRVWEETD 731
Score = 95 (38.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 27/121 (22%), Positives = 53/121 (43%)
Query: 333 VAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND 392
+++ KL +++ S+D IK+W D D + + +V+ N+ N
Sbjct: 619 ISYDSKL---IITSSADKNIKIWGLD--FGDCHKSLFGHQDSVLQVAFIPHNAEG---NG 670
Query: 393 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
+ S+DR W + GH +W++ S +++AS DK+I++W +
Sbjct: 671 HHFFSTSKDRVIKYWDGDKFEQIQRLHGHHGEVWALAVSHSGNFIVSASHDKSIRVWEET 730
Query: 453 D 453
D
Sbjct: 731 D 731
Score = 55 (24.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 499 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ T K WAL G K G ++ + LWH +T
Sbjct: 365 VRTTGKTRSVDWALTHGTKDLQLVVGTTNNQIELWHVTT 403
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 241 (89.9 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 76/308 (24%), Positives = 142/308 (46%)
Query: 231 LSKRLVGYNEEILDLKF----LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVL 286
+ + L G+++ I L + E +Y+A ++ V+V+D ++ C +L GH++ V
Sbjct: 191 VGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT 250
Query: 287 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
CL G L+ + S+D ++++W + GH V +A S L +G
Sbjct: 251 CLRW----GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA--LRTG 304
Query: 347 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 406
+ + + L ++ LK +A+ N + + LV +GS D T +
Sbjct: 305 AFEPAEASVNAQDLRGSLQE---LKERAL-----SRYNLVRGRGLERLV-SGSDDFTLFL 355
Query: 407 WR-LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS 465
W D + GH+ I V FSP +++ +AS DK+IK+W G L + GH +
Sbjct: 356 WSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVA 415
Query: 466 SVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGG 525
+V + ++ +VS +D +K+W V+ + A H D+++A+ + A+GG
Sbjct: 416 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGG 475
Query: 526 SDALVNLW 533
D + +W
Sbjct: 476 KDKCLRIW 483
Score = 193 (73.0 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 98/421 (23%), Positives = 167/421 (39%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+T+K L A RV +C ++L+ H V S+A + G L S D V
Sbjct: 83 ETEKVLDIIYQPQAVFRV--RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRF 140
Query: 101 WDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSS-----YNQQTIKKKRRSLEIHFI 154
WDL + T + V ++ P G S + ++ T K+ R+L H
Sbjct: 141 WDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSK 200
Query: 155 TVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQL 214
+ + +A+ C Y SS S + D+ G + Q + C+
Sbjct: 201 WITALSWEPL-HANPECRYVASSSKDG-SVRVWDTTAGRCERILTGHTQSVTCLRWGGDG 258
Query: 215 LLYT-----TVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDL 269
LLY+ T++V + + +L + L G+ + + Y A+ T + +
Sbjct: 259 LLYSASQDRTIKV-WRAHDGVLCRTLQGHGHWVNTMAL---STDY-ALRTGAFEPAEASV 313
Query: 270 SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRCCVGVGTGHMG 328
++ L E L G +V+GS D ++ LW +E + + TGH
Sbjct: 314 NAQDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQA 373
Query: 329 AVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAV 388
+ V FS + S S D +IK+W DG + K A + H + +A
Sbjct: 374 LINQVLFSPD-SRIIASASFDKSIKLW--DGRTG--------KYLASLRGHVAAVYQIAW 422
Query: 389 APNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKI 448
+ + L+ +GS D T VW + GH +++V++SP Q V + DK ++I
Sbjct: 423 SADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 482
Query: 449 W 449
W
Sbjct: 483 W 483
Score = 151 (58.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 32/93 (34%), Positives = 49/93 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + +WD G +GH V I + D LL SGS D+T++VWD+ A+K A
Sbjct: 393 DKSIKLWDGRTGKYLASLRGHVAAVYQIAW--SADSRLLVSGSSDSTLKVWDVKAQKLAA 450
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
L H V ++ + DG + S G+DK + +W
Sbjct: 451 DLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 69/319 (21%), Positives = 136/319 (42%)
Query: 11 KVLVWDVDGGFCT-HYFKGHKGVVSSILFHP---DTDKSLLFSGSDDATVRVWDLLAKKC 66
++L+WD G GH ++++ + P + + + S S D +VRVWD A +C
Sbjct: 179 QILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRC 238
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD-YSCKLTVPTYEMVEAVC--- 122
L H VT + DG L SA +D+ + +W D C+ V +
Sbjct: 239 ERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALST 297
Query: 123 --AIPPGSAFDSFLSSYNQQTIKK-----KRRSLEIHFITVGERGIVRMWN-ADSACLYE 174
A+ G AF+ +S N Q ++ K R+L + + G RG+ R+ + +D L+
Sbjct: 298 DYALRTG-AFEPAEASVNAQDLRGSLQELKERALSRYNLVRG-RGLERLVSGSDDFTLFL 355
Query: 175 -QKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSK 233
+ D M + P ++ + + D+ + L+ + + + S
Sbjct: 356 WSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDG-----RTGKYLASL 410
Query: 234 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
R G+ + + + + + L ++ ++V+D+ + + L GH++ V +D
Sbjct: 411 R--GHVAAVYQIAW-SADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP- 466
Query: 294 SSGKILIVTGSKDNSVRLW 312
G+ + +G KD +R+W
Sbjct: 467 -DGQ-RVASGGKDKCLRIW 483
Score = 137 (53.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 38/131 (29%), Positives = 63/131 (48%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
+ GH ++ + S +I + S D S++LWD + + GH+ AV +A+S
Sbjct: 368 MTGHQALI---NQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 397
LVSGSSD T+KVW D Q K A + H ++ ++ +P+ V +
Sbjct: 425 D-SRLLVSGSSDSTLKVW------DVKAQ----KLAADLPGHADEVYAVDWSPDGQRVAS 473
Query: 398 GSQDRTACVWR 408
G +D+ +WR
Sbjct: 474 GGKDKCLRIWR 484
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/170 (25%), Positives = 79/170 (46%)
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT-FRGHKRGIWSVEFSPV 433
++++ GK + S AV + ++ Q + V+R+ + + GH + SV FSP
Sbjct: 69 IISSLGKTLESQAVE-TEKVLDIIYQPQA--VFRVRAVTRCTSSLEGHSEAVISVAFSPT 125
Query: 434 DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 493
+ + + SGD T++ W +S + T +GH VL S+ G ++ S +G + LW
Sbjct: 126 GKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDP 185
Query: 494 RTGE----CIATYDKHEDKI-WA-LAVGKKTEMFATGGSDALVNLWHDST 537
TG+ +A + K + W L + A+ D V +W D+T
Sbjct: 186 STGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVW-DTT 234
Score = 123 (48.4 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 32/81 (39%), Positives = 41/81 (50%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
CT +GH V S+ F P T K L SGS D TVR WDL + T H V S++
Sbjct: 106 CTSSLEGHSEAVISVAFSP-TGKYLA-SGSGDTTVRFWDLSTETPHFTCQGHRHWVLSIS 163
Query: 82 ITSDGSTLISAGRDKVVNLWD 102
+ DG L S ++ + LWD
Sbjct: 164 WSPDGKKLASGCKNGQILLWD 184
Score = 109 (43.4 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 32/98 (32%), Positives = 44/98 (44%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V VWD G C GH V+ + + D LL+S S D T++VW
Sbjct: 225 DGSVRVWDTTAGRCERILTGHTQSVTCLRWGGD---GLLYSASQDRTIKVWRAHDGVLCR 281
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGR--DKVVNLWDLR 104
TL H V +MA+++D + A + VN DLR
Sbjct: 282 TLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLR 319
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 296 (109.3 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 92/328 (28%), Positives = 149/328 (45%)
Query: 212 QQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSS 271
Q LL E +K L L G++ I +KF E +LA + + ++
Sbjct: 12 QSLLSAPRREEEPQKPNYALRLTLAGHSAAISSVKFSPNGE-WLASSAADALIIIWGAYD 70
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVG 331
+C L GHS L + A SS +V+ S D ++++WD S C+ GH V
Sbjct: 71 GNCKKTLYGHS---LEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVF 127
Query: 332 AVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPN 391
F+ N +VSGS D ++K+W + + LK ++AH I+++ N
Sbjct: 128 CCDFNPP-SNLIVSGSFDESVKIW-------EVKTGKCLKT---LSAHSDPISAVNFNCN 176
Query: 392 DSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWS 450
SL+ +GS D +W + T S V+FSP + ++TA+ D T+K+W
Sbjct: 177 GSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWD 236
Query: 451 ISDGSCLKTFEGHTSS--VLRASFLTRGAQ-IVSCGADGLVKLWTVRTGECIATYDKHED 507
S G CLKT+ GH + L ASF G + +VS D +V +W ++T E + H D
Sbjct: 237 YSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTD 296
Query: 508 KIWALAVGKKTEMFATGG--SDALVNLW 533
+ + A + A+ +D + +W
Sbjct: 297 VVISAACHPTKNIIASAALENDKTIKVW 324
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 37/128 (28%), Positives = 66/128 (51%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
P+ +T GH I SV+FSP + + +++ D I IW DG+C KT GH+ +
Sbjct: 27 PNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISD 86
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
++ + +++VS D +K+W +R+G+C+ T H D ++ + + +G D
Sbjct: 87 VAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDES 146
Query: 530 VNLWHDST 537
V +W T
Sbjct: 147 VKIWEVKT 154
Score = 172 (65.6 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 66/302 (21%), Positives = 122/302 (40%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH +SS+ F P+ + L S + DA + +W C TL H ++ +A +SD S
Sbjct: 37 GHSAAISSVKFSPNGE--WLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSS 94
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI-PPGS-----AFDSFLSSYNQQT 141
L+SA DK + +WD+R C T+ + C PP + +FD + + +T
Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKT 154
Query: 142 IKKKRRSLEIHFITVGE-----RG-IVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 195
K ++L H + G ++ + D C +S + D+ +
Sbjct: 155 -GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSF 213
Query: 196 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 253
P+ + +L T D L L+ + L K G+ E L F +
Sbjct: 214 VKFSPNGKYILTATLDNTLKLW------DYSRGRCL-KTYTGHKNEKYCLFASFSVTGRK 266
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
++ + V +++L + L GH+++V+ C + I D ++++W
Sbjct: 267 WVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISA-ACHPTKNIIASAALENDKTIKVWS 325
Query: 314 SE 315
S+
Sbjct: 326 SD 327
Score = 155 (59.6 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 58/226 (25%), Positives = 104/226 (46%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNI-EQVQVYDLSSMSCSYVLAGHSEIVLCLD-T 290
K L G+++ + F L V+ + E V+++++ + C L+ HS+ + ++
Sbjct: 117 KTLKGHSDFVFCCDF--NPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFN 174
Query: 291 CALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
C +G LIV+GS D R+WD+ S +C + V V FS ++++ + D
Sbjct: 175 C---NGS-LIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPN-GKYILTATLD 229
Query: 350 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
+T+K+W + + K + A S +V +V +GS+D +W L
Sbjct: 230 NTLKLWDYSRGRCLKTYTGHKNEKYCLFA------SFSVTGRKWVV-SGSEDNMVYIWNL 282
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS--GDKTIKIWSISD 453
V +GH + S P ++ +A+ DKTIK+WS SD
Sbjct: 283 QTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWS-SD 327
Score = 155 (59.6 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD +++W G C GH +S + + +D S L S SDD T++VWD+ + KC+
Sbjct: 59 ADALIIIWGAYDGNCKKTLYGHSLEISDVAW--SSDSSRLVSASDDKTLKVWDMRSGKCL 116
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAV 121
TL H V + ++S D+ V +W+++ C T+ + + + AV
Sbjct: 117 KTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAV 171
Score = 139 (54.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ D V +W+V G C H +S++ F+ + SL+ SGS D R+WD
Sbjct: 138 IVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFN--CNGSLIVSGSYDGLCRIWDAA 195
Query: 63 AKKCVATL-DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLT 111
+ +C+ TL D+ V+ + + +G +++A D + LWD C T
Sbjct: 196 SGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKT 245
Score = 70 (29.7 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 17/75 (22%), Positives = 38/75 (50%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H + ++S+ + +G L S+ D ++ +W D +CK T+ + + + + S
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSL--EISDVAWSS 91
Query: 129 AFDSFLSSYNQQTIK 143
+S+ + +T+K
Sbjct: 92 DSSRLVSASDDKTLK 106
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 269 (99.8 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 64/190 (33%), Positives = 94/190 (49%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
TGH + +V F + +VS S D TIKVW F+ S + E+ + AV +DI
Sbjct: 103 TGHRNCINSVKFHPSF-SLMVSASEDATIKVWDFE--SGEFERTLKGHTNAV-----QDI 154
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
+ +L+ + S D T +W V T GH + V F+P +I++S D
Sbjct: 155 D---FDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRD 211
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W + G C+KT GH V + + G+ I SC D +K W + GEC+ATY
Sbjct: 212 KTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYR 271
Query: 504 KHEDKIWALA 513
+H + LA
Sbjct: 272 EHSHVVECLA 281
Score = 256 (95.2 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 94/343 (27%), Positives = 154/343 (44%)
Query: 24 HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAIT 83
H GH+ ++S+ FHP SL+ S S+DAT++VWD + + TL H + V +
Sbjct: 100 HILTGHRNCINSVKFHPSF--SLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFD 157
Query: 84 SDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTI 142
G+ L S D + LWD + Y C T+ ++ V V P G D +SS +TI
Sbjct: 158 KTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSG---DQLISSSRDKTI 214
Query: 143 KKKRRSLEIHFIT-VGERGIVRMWNA--DSACLYEQKSSDVTISFEMDDSKRGFTAATVL 199
K + T VG VR D +C+ S+D TI + + +G AT
Sbjct: 215 KVWEAATGYCIKTLVGHEDWVRKITVSEDGSCI-ASCSNDQTI--KTWNIVKGECLATYR 271
Query: 200 PSNQGLLCV---TADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLA 256
+ + C+ TA+ + + + PE K ++ K+ G N +G+ YLA
Sbjct: 272 EHSHVVECLAFSTANIIDIPGSLLSTPEGKSKV---KQGPGGN-------LVGQCG-YLA 320
Query: 257 VATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL--DTCALSSGKILIVTGSKDNSVRLWD- 313
+ + +++++L++ C GH V + C GK L+ G D ++R+WD
Sbjct: 321 TGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPC----GKFLLSVGD-DKTIRVWDI 375
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQN-FLVSGSSDHTIKVW 355
++ RC + H + + F L N + +G D IKVW
Sbjct: 376 AQGRCIKTINEAHTHFISCLDFC--LHNPHIATGGVDDVIKVW 416
Score = 239 (89.2 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 48/162 (29%), Positives = 76/162 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ H INS+ P+ SL+ + S+D T VW T +GH + ++F
Sbjct: 99 KHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDK 158
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
++ + S D TIK+W C+KT GH +V F G Q++S D +K+W
Sbjct: 159 TGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE 218
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 534
TG CI T HED + + V + A+ +D + W+
Sbjct: 219 AATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260
Score = 190 (71.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 36/118 (30%), Positives = 60/118 (50%)
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQI 479
GH+ I SV+F P ++++AS D TIK+W G +T +GHT++V F G +
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLL 163
Query: 480 VSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
SC AD +KLW +T +C+ T H+ + + + + D + +W +T
Sbjct: 164 ASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAAT 221
Score = 185 (70.2 bits), Expect = 7.0e-25, Sum P(2) = 7.0e-25
Identities = 50/145 (34%), Positives = 67/145 (46%)
Query: 2 FALLEGA--DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 59
F+L+ A D + VWD + G KGH V I F D +LL S S D T+++W
Sbjct: 118 FSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDF--DKTGNLLASCSADLTIKLW 175
Query: 60 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MV 118
D CV TL H V+ + T G LIS+ RDK + +W+ C T+ +E V
Sbjct: 176 DFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWV 235
Query: 119 EAVCAIPPGSAFDSFLSSYNQQTIK 143
+ GS S N QTIK
Sbjct: 236 RKITVSEDGSCI---ASCSNDQTIK 257
Score = 177 (67.4 bits), Expect = 7.0e-25, Sum P(2) = 7.0e-25
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 395 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 454
+ TGS+D+T +W L + T+ GH + +V F P + +++ DKTI++W I+ G
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQG 378
Query: 455 SCLKTF-EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
C+KT E HT + F I + G D ++K+W ++
Sbjct: 379 RCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 163 (62.4 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 35/96 (36%), Positives = 50/96 (52%)
Query: 439 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 498
T S DKTIKIW ++ G CL T+ GH + V F G ++S G D +++W + G C
Sbjct: 321 TGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRC 380
Query: 499 IATYDK-HEDKIWALAVGKKTEMFATGGSDALVNLW 533
I T ++ H I L ATGG D ++ +W
Sbjct: 381 IKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 159 (61.0 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 46/174 (26%), Positives = 75/174 (43%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD C GH VS + F P D+ L S S D T++VW+ C+
Sbjct: 168 ADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQ--LISSSRDKTIKVWEAATGYCI 225
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
TL H V + ++ DGS + S D+ + W++ C T + V A
Sbjct: 226 KTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTA 285
Query: 128 SAFD---SFLSS-YNQQTIKK-KRRSL--EIHFITVGERG-IVRMWN-ADSACL 172
+ D S LS+ + +K+ +L + ++ G R +++W A CL
Sbjct: 286 NIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCL 339
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + +W++ G C + GH V ++ FHP K LL G DD T+RVWD+ +C+
Sbjct: 325 DKTIKIWELATGRCLATYIGHDNWVRAVRFHP-CGKFLLSVG-DDKTIRVWDIAQGRCIK 382
Query: 69 TLDK-HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
T+++ H ++ + + + G D V+ +W L+
Sbjct: 383 TINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 44/165 (26%), Positives = 68/165 (41%)
Query: 375 VVAAHGKDINSLAV--APNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
V HG D N V P+ + + S+D+T VW + T GH+ + + S
Sbjct: 183 VKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSE 242
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+ + S D+TIK W+I G CL T+ H+ V +F T A I+ L +
Sbjct: 243 DGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFST--ANIIDIPGS----LLS 296
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
G+ K + VG+ ATG D + +W +T
Sbjct: 297 TPEGK-----SKVKQGPGGNLVGQ-CGYLATGSRDKTIKIWELAT 335
Score = 119 (46.9 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L G+ + D+ F + LA + ++++D + C L GH V C+
Sbjct: 142 RTLKGHTNAVQDIDF-DKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTP 200
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
SG LI + S+D ++++W++ + C+ GH V + S+ + + S S+D TI
Sbjct: 201 --SGDQLI-SSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSED-GSCIASCSNDQTI 256
Query: 353 KVWS 356
K W+
Sbjct: 257 KTWN 260
Score = 113 (44.8 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 33/110 (30%), Positives = 51/110 (46%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+ TGS+D ++++W+ + C+ GH V AV F FL+S D TI+VW
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHP-CGKFLLSVGDDKTIRVW---- 373
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
D Q +K + AH I+ L ++ + TG D VW+L
Sbjct: 374 ---DIAQGRCIKT--INEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 236 (88.1 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 76/308 (24%), Positives = 140/308 (45%)
Query: 231 LSKRLVGYNEEILDLKF----LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVL 286
+ + L G+++ I L + E +Y+A ++ V+V+D ++ C L GH++ V
Sbjct: 192 VGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVT 251
Query: 287 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
CL G L+ + S+D ++++W + GH V +A S L +G
Sbjct: 252 CLRW----GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA--LRTG 305
Query: 347 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 406
+ + + L ++ LK +A+ N + + LV +GS D T +
Sbjct: 306 AFEPAEASVNAQDLRGSLQE---LKERAL-----SRYNLVRGQGPERLV-SGSDDFTLFL 356
Query: 407 WR-LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS 465
W D + GH+ I V FSP +V+ +AS DK+IK+W G L + GH +
Sbjct: 357 WSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVA 416
Query: 466 SVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGG 525
+V + ++ +VS +D +K+W V+ + H D+++A+ + A+GG
Sbjct: 417 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGG 476
Query: 526 SDALVNLW 533
D + +W
Sbjct: 477 KDKCLRIW 484
Score = 196 (74.1 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 99/421 (23%), Positives = 168/421 (39%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+T+K L A RV +C ++L+ H V S+A + G L S D V
Sbjct: 84 ETEKVLDIIYQPQAIFRV--RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRF 141
Query: 101 WDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSS-----YNQQTIKKKRRSLEIHFI 154
WDL + T + V ++ P G S + ++ T K+ R+L H
Sbjct: 142 WDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSK 201
Query: 155 TVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQL 214
+ + +A+ C Y SS S + D+ G T+ Q + C+
Sbjct: 202 WITALSWEPL-HANPECRYVASSSKDG-SVRVWDTTAGRCERTLTGHAQSVTCLRWGGDG 259
Query: 215 LLYT-----TVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDL 269
LLY+ T++V + + +L + L G+ + + Y A+ T + +
Sbjct: 260 LLYSASQDRTIKV-WRAHDGVLCRTLQGHGHWVNTMAL---STDY-ALRTGAFEPAEASV 314
Query: 270 SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRCCVGVGTGHMG 328
++ L E L G +V+GS D ++ LW +E + + TGH
Sbjct: 315 NAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQA 374
Query: 329 AVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAV 388
+ V FS + S S D +IK+W DG + K A + H + +A
Sbjct: 375 LINQVVFSPD-SRVIASASFDKSIKLW--DGRTG--------KYLASLRGHVAAVYQIAW 423
Query: 389 APNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKI 448
+ + L+ +GS D T VW + GH +++V++SP Q V + DK ++I
Sbjct: 424 SADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 483
Query: 449 W 449
W
Sbjct: 484 W 484
Score = 152 (58.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 91/374 (24%), Positives = 164/374 (43%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYF-KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
L G+ D V WD+ H+ +GH+ V SI + PD K L SG + + +WD
Sbjct: 130 LASGSGDTTVRFWDLSTE-TPHFTCQGHRHWVLSISWSPDGKK--LASGCKNGQILLWDP 186
Query: 62 LAKKCVA-TLDKHFSRVTSMA-----ITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY 115
K V L H +T+++ + + S+ +D V +WD C+ T+ +
Sbjct: 187 STGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGH 246
Query: 116 EMVEAVCAIPPGSAFDSFLSSYNQ-QTIKKKR-------RSLEIHFITVGERGIVRMWNA 167
++V + G D L S +Q +TIK R R+L+ H V + +
Sbjct: 247 --AQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 302
Query: 168 DSACLYEQKSSDVT---ISFEMDDSKRGFTAATVLPSNQG---LLCVTADQQLLLYTTVE 221
+ +E + V + + + K + L QG L+ + D L L++ E
Sbjct: 303 RTGA-FEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAE 361
Query: 222 VPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGH 281
+KK L+ R+ G+ I + F + + +A A+ + ++++D + L GH
Sbjct: 362 --DKKP---LA-RMTGHQALINQVVF-SPDSRVIASASFDKSIKLWDGRTGKYLASLRGH 414
Query: 282 SEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN 341
V + A S+ L+V+GS D+++++WD +++ GH V AV +S Q
Sbjct: 415 ---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQR 471
Query: 342 FLVSGSSDHTIKVW 355
+ SG D +++W
Sbjct: 472 -VASGGKDKCLRIW 484
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 39/165 (23%), Positives = 69/165 (41%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 438
H + + S+A +P + +GS D T W L T +GH+ + S+ +SP + +
Sbjct: 114 HSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLA 173
Query: 439 TASGDKTIKIWSISDGSCL-KTFEGHTSSVLRASFLTRGAQ-----IVSCGADGLVKLWT 492
+ + I +W S G + + GH+ + S+ A + S DG V++W
Sbjct: 174 SGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWD 233
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW--HD 535
G C T H + L G +++ D + +W HD
Sbjct: 234 TTAGRCERTLTGHAQSVTCLRWGGDGLLYSAS-QDRTIKVWRAHD 277
Score = 134 (52.2 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 37/131 (28%), Positives = 62/131 (47%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
+ GH ++ + S +I + S D S++LWD + + GH+ AV +A+S
Sbjct: 369 MTGHQALI---NQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 425
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 397
LVSGSSD T+KVW D Q K + H ++ ++ +P+ V +
Sbjct: 426 D-SRLLVSGSSDSTLKVW------DVKAQ----KLSTDLPGHADEVYAVDWSPDGQRVAS 474
Query: 398 GSQDRTACVWR 408
G +D+ +WR
Sbjct: 475 GGKDKCLRIWR 485
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 36/127 (28%), Positives = 58/127 (45%)
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
+ GH + SV FSP + + + SGD T++ W +S + T +GH VL S+ G
Sbjct: 110 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 169
Query: 477 AQIVSCGADGLVKLWTVRTGECIA-TYDKHEDKIWALA-----VGKKTEMFATGGSDALV 530
++ S +G + LW TG+ + H I AL+ + A+ D V
Sbjct: 170 KKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSV 229
Query: 531 NLWHDST 537
+W D+T
Sbjct: 230 RVW-DTT 235
Score = 123 (48.4 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 32/81 (39%), Positives = 41/81 (50%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
CT +GH V S+ F P T K L SGS D TVR WDL + T H V S++
Sbjct: 107 CTSSLEGHSEAVISVAFSP-TGKYLA-SGSGDTTVRFWDLSTETPHFTCQGHRHWVLSIS 164
Query: 82 ITSDGSTLISAGRDKVVNLWD 102
+ DG L S ++ + LWD
Sbjct: 165 WSPDGKKLASGCKNGQILLWD 185
>FB|FBgn0038597 [details] [associations]
symbol:CG8064 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD EMBL:AY047497
RefSeq:NP_650705.1 UniGene:Dm.4684 SMR:Q9VE98 MINT:MINT-1586038
STRING:Q9VE98 EnsemblMetazoa:FBtr0083574 GeneID:42196
KEGG:dme:Dmel_CG8064 UCSC:CG8064-RA FlyBase:FBgn0038597
InParanoid:Q9VE98 OrthoDB:EOG4KWH7Q ChiTaRS:CG8064 GenomeRNAi:42196
NextBio:827621 Uniprot:Q9VE98
Length = 922
Score = 294 (108.6 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 133/582 (22%), Positives = 242/582 (41%)
Query: 158 ERGIVRMWNADSACLY-EQKSSDVTISFEMDDSKRGFTAA-TVLPSNQGL--LCVTADQQ 213
E+ + +D A L EQ SD E +K+ + VL NQ L L A+
Sbjct: 312 EKKVAEDEGSDEAKLSTEQSLSDEIKRLESIRAKQKIKSIDVVLGQNQELRVLVSLANNS 371
Query: 214 LLLYT------TVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNI-EQVQV 266
L LY+ T + + +L+ S +G+ E+ + F + LA+ + E +
Sbjct: 372 LCLYSLEASIKTRKATDPSAKLLRSLTRLGHQSEVRSVCFSNDS---LAIGSGAGESFKF 428
Query: 267 YDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGH 326
+D +M C + ++ +LC G ++ G K + + D + V H
Sbjct: 429 WDRDAMQCLRTVP--TDYILC---SKFVPGDRYVLLGMKSGKLLIVDVAAADIVEEIPAH 483
Query: 327 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS- 385
G + ++A Q V+GS D T+K+W+F+ L D E K +++ + +
Sbjct: 484 EGELWSIAILPD-QKGCVTGSGDTTVKIWTFE-LIDAGEGAAQTKVLSLLHKNTLKLEET 541
Query: 386 ---LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 442
LAV+P+ + G D T V+ L ++ GHK + ++ S +++T S
Sbjct: 542 VLCLAVSPDMKYLAVGLLDATVKVFFLDTFKFYLSLYGHKLPVICLDISYDSNLIVTGSA 601
Query: 443 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 502
D+ +K+W ++ G C ++ H SV+ F+ R +CG DG VK W E I T
Sbjct: 602 DRNVKVWGLNFGDCHRSIFAHDDSVMSVQFIPRTHMFFTCGKDGKVKQWDGDNFEKILTL 661
Query: 503 DKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAV 562
H + + L+V T GSD + ++ + +++EN
Sbjct: 662 PGHIGEAYCLSVSPNGRYLVTCGSDRTLRMFERTDETIVLKDVQEEER-----EQMENEQ 716
Query: 563 LDADYTKAIQVAFELRRPHKLF---ELFA-SVCRKREAELQIEKALHALGKEEIRQLLEY 618
L + + L+ P + E A S+ E Q E L A K E+ L++
Sbjct: 717 LATGEDNTVPLLPGLKMPSRKTVGSEQSAESILECLEISKQFE--LEAEEKPELHPLMQA 774
Query: 619 VREWNTKPKLCHVAQFVLFQLFNIHPPTEIIEIKGISDVLEGLIPYTQRHFSRIDRLVRS 678
++ N + L V+ + + ++ ++ + +VLE L + +++ L R
Sbjct: 775 LQVKNPEDFL--VSTLMRIRASDLEEALLLLPFSTVCEVLERLPTLLTQRPDQLELLCRV 832
Query: 679 T-FLLDYTLTGMSVIEPDTEAREVKAESLVDSNVHQDANDVV 719
T FL + +S + + + VK S++ +V Q DV+
Sbjct: 833 TIFLFKVHMKPISAAK-NMKPLLVKLLSMLKRDVGQ-LRDVL 872
Score = 111 (44.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 68/305 (22%), Positives = 125/305 (40%)
Query: 73 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGSAFD 131
H S V S+ ++D S I +G + WD C TVPT + + +C+ PG +
Sbjct: 402 HQSEVRSVCFSND-SLAIGSGAGESFKFWDRDAMQCLRTVPT-DYI--LCSKFVPGDRY- 456
Query: 132 SFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQK-----SSDVTI---S 183
L + + + + +I G +W+ A L +QK S D T+ +
Sbjct: 457 VLLGMKSGKLLIVDVAAADIVEEIPAHEG--ELWSI--AILPDQKGCVTGSGDTTVKIWT 512
Query: 184 FEMDDSKRGFTAATVLP---SN-----QGLLC--VTADQQLLLYTTVEVPEKKMELILSK 233
FE+ D+ G VL N + +LC V+ D + L ++ K L K
Sbjct: 513 FELIDAGEGAAQTKVLSLLHKNTLKLEETVLCLAVSPDMKYLAVGLLDATVKVFFLDTFK 572
Query: 234 ---RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L G+ ++ L + + + + V+V+ L+ C + H + V+ +
Sbjct: 573 FYLSLYGHKLPVICLD-ISYDSNLIVTGSADRNVKVWGLNFGDCHRSIFAHDDSVMSVQF 631
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
+ + T KD V+ WD ++ + GH+G ++ S +LV+ SD
Sbjct: 632 IPRTH---MFFTCGKDGKVKQWDGDNFEKILTLPGHIGEAYCLSVSPN-GRYLVTCGSDR 687
Query: 351 TIKVW 355
T++++
Sbjct: 688 TLRMF 692
Score = 69 (29.3 bits), Expect = 2.5e-24, Sum P(2) = 2.5e-24
Identities = 25/91 (27%), Positives = 41/91 (45%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC- 66
A V+VWD+ G + K V+S+ PD + G D V+++DL + +
Sbjct: 43 AAENVIVWDLRMGDRKLTLRREKFEVTSLRVSPD--HLHIAVGYADGMVQIFDLSSDRYY 100
Query: 67 --VATLDKHFSRVTSMAITSDGSTLISAGRD 95
+ TL H + V+ + G L+S G D
Sbjct: 101 DPICTLALHKNAVSILRYDLQGMRLVSGGLD 131
Score = 52 (23.4 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 56 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
V VWDL TL + VTS+ ++ D + D +V ++DL
Sbjct: 47 VIVWDLRMGDRKLTLRREKFEVTSLRVSPDHLHIAVGYADGMVQIFDL 94
Score = 38 (18.4 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 84 SDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
++G + + + V+ +WDLR KLT+
Sbjct: 34 TEGRYVAAPAAENVI-VWDLRMGDRKLTL 61
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 312 (114.9 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 123/560 (21%), Positives = 230/560 (41%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL---- 62
G D V WD+D C GH+ V ++ + +K L+ +G+ D+ +RVWD+
Sbjct: 168 GKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSE-EKRLI-TGASDSELRVWDIAYLQE 225
Query: 63 --------AKKCVA-------TLDKHFSRVTSMAITSD-------GSTLISAGRDKVVNL 100
KK TL+ + D +++ GRD+VVNL
Sbjct: 226 IEDPEEPDPKKIKGSSPGIQDTLEAEDGAFETDEAPEDRILSCRKAGSIMREGRDRVVNL 285
Query: 101 WDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG 160
+ T ++E C + + + +KK R+ ++H + GE
Sbjct: 286 AVDKTGRILACHGTDSVLELFCILSKKE-----IQKKMDKKMKKARKKAKLHS-SKGEEE 339
Query: 161 IVRMWNADSACLYE-QKSSDVTIS-----FEMDDSKRGFTAATVLPSNQGLLCVTADQQL 214
+ N + + E Q+ +++ S F++ S G A L N + + + L
Sbjct: 340 DPEV-NVEMSLQDEIQRVTNIKTSAKIKSFDLIHSPHGELKAVFLLQNNLVELYSLNPSL 398
Query: 215 LLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC 274
T + P + + + G+ ++ L F + L+ A + +++++ S++ C
Sbjct: 399 ---PTPQ-PVRTSRITIG----GHRSDVRTLSFSSDNIAVLSAAA--DSIKIWNRSTLQC 448
Query: 275 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 334
+ E LC G +V G+K ++L+D S + H GA+ +++
Sbjct: 449 IRTMT--CEYALC---SFFVPGDRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSMS 503
Query: 335 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH-GKDINSLAVAPNDS 393
S + F V+G +D ++K W F+ + D+ L K +D+ ++ +PN
Sbjct: 504 LSPDQRGF-VTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQK 562
Query: 394 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
L+ D T ++ + L ++ GHK + ++ S ++ T S D+ +KIW +
Sbjct: 563 LLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDF 622
Query: 454 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 513
G C K+ H SV+ F+ + + G D +K W E I T + H +IW LA
Sbjct: 623 GDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLA 682
Query: 514 VGKKTEMFATGGSDALVNLW 533
V + + D + LW
Sbjct: 683 VSPSGDYVVSSSHDKSLRLW 702
Score = 194 (73.4 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 42/165 (25%), Positives = 81/165 (49%)
Query: 371 KAKAVVAAHG--KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 428
K + ++ G +++ L +P+ + G +D + ++ L VTF GHK I ++
Sbjct: 54 KGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTL 113
Query: 429 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 488
++ + + + S D I +W + + S L +GH ++ +A FL +V+ G D +V
Sbjct: 114 KYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMV 173
Query: 489 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
K W + T C T H ++W L + + + TG SD+ + +W
Sbjct: 174 KWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVW 218
Score = 162 (62.1 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 42/160 (26%), Positives = 72/160 (45%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
P S +T GH+ + ++ FS + V++A+ D +IKIW+ S C++T T
Sbjct: 403 PVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTM---TCEYAL 458
Query: 470 ASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 528
SF G + V G G ++L+ + +G + T D H+ +W++++ F TGG+D
Sbjct: 459 CSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADK 518
Query: 529 LVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYT 568
V W R +L+ VL Y+
Sbjct: 519 SVKFWDFELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYS 558
Score = 141 (54.7 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D ++VWDV + KGHK ++ LF +K+LL + D V+ WDL
Sbjct: 122 LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFL--REKNLLVTSGKDTMVKWWDLD 179
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+ C T+ H + V + + S+ LI+ D + +WD+
Sbjct: 180 TQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWDI 220
Score = 132 (51.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 46/143 (32%), Positives = 70/143 (48%)
Query: 237 GYNEEILDLKF--LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
G+ I LK+ LG LA + + V+D+ + S Y L GH + + T AL
Sbjct: 105 GHKAAITTLKYDQLGGR---LASGSKDTDIIVWDVINESGLYRLKGHKDAI----TQALF 157
Query: 295 -SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAV-GAVAFSKKLQNFLVSGSSDHTI 352
K L+VT KD V+ WD +++ C GH V G V S++ + L++G+SD +
Sbjct: 158 LREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKR--LITGASDSEL 215
Query: 353 KVWSFDGLSD--DAEQPMNLKAK 373
+VW L + D E+P K K
Sbjct: 216 RVWDIAYLQEIEDPEEPDPKKIK 238
Score = 130 (50.8 bits), Expect = 0.00016, P = 0.00016
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
ADR V +W +D G C H V + F P + L F+ D ++ WD + +
Sbjct: 611 ADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSH--LFFTAGKDHKIKQWDADKFEHI 668
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
TL+ H + +A++ G ++S+ DK + LW+
Sbjct: 669 QTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 124 (48.7 bits), Expect = 0.00070, P = 0.00070
Identities = 34/151 (22%), Positives = 64/151 (42%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
L G D +I+++S LS + N H I +L + +GS+D
Sbjct: 80 LAVGYEDGSIRIFSL--LSGEGNVTFN--------GHKAAITTLKYDQLGGRLASGSKDT 129
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
VW + + + +GHK I F +++T+ D +K W + C KT G
Sbjct: 130 DIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVG 189
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTV 493
H + V L+ ++++ +D +++W +
Sbjct: 190 HRTEVWGLVLLSEEKRLITGASDSELRVWDI 220
Score = 118 (46.6 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 27/104 (25%), Positives = 50/104 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++ + G F GHK ++++ + D L SGS D + VWD++ + +
Sbjct: 86 DGSIRIFSLLSGEGNVTFNGHKAAITTLKY--DQLGGRLASGSKDTDIIVWDVINESGLY 143
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
L H +T + + L+++G+D +V WDL C T+
Sbjct: 144 RLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTM 187
Score = 95 (38.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 24/92 (26%), Positives = 45/92 (48%)
Query: 12 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 71
V +WD+ G +G K V+ + P D L G +D ++R++ LL+ + T +
Sbjct: 47 VFIWDLRKGEKILILQGLKQEVTCLC--PSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFN 104
Query: 72 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H + +T++ G L S +D + +WD+
Sbjct: 105 GHKAAITTLKYDQLGGRLASGSKDTDIIVWDV 136
Score = 83 (34.3 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 19/81 (23%), Positives = 40/81 (49%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K L +++ ++ L+F+ + + + +++ +D L GH + + CL A
Sbjct: 627 KSLFAHDDSVMYLQFVPKSHLFFTAGKD-HKIKQWDADKFEHIQTLEGHHQEIWCL---A 682
Query: 293 LSSGKILIVTGSKDNSVRLWD 313
+S +V+ S D S+RLW+
Sbjct: 683 VSPSGDYVVSSSHDKSLRLWE 703
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 285 (105.4 bits), Expect = 4.8e-24, P = 4.8e-24
Identities = 86/330 (26%), Positives = 156/330 (47%)
Query: 212 QQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSS 271
QQ T +P+ IL L G+ + I +KF + ++LA A+ + ++++
Sbjct: 20 QQQQPQQTESIPQTP-NYILKYTLKGHLKSISSVKF-SPDGKWLASASADKTIKIWGAYD 77
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVG 331
L GH E + A S LI + S D ++++WD ES V GH V
Sbjct: 78 GKFERTLEGHKEGI---SDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVF 134
Query: 332 AVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPN 391
V+F+ + N +VSGS D +++W + + +++AH + + +
Sbjct: 135 GVSFNPQ-SNLIVSGSFDENVRIWDVN----------TGECTKMISAHSDPVTGVHFNRD 183
Query: 392 DSLVCTGSQDRTACVWRLP--DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW 449
+LV +GS D T +W L++ ++ K + V+FSP + V+ + D T+++W
Sbjct: 184 GTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKE-VSFVKFSPNGKFVLAGTLDNTLRLW 242
Query: 450 SISDGS-CLKTFEGHTSS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKH 505
S ++ CLKT+ GH + + ++F +T G IV+ D L+ ++ ++T E + T H
Sbjct: 243 SYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGH 302
Query: 506 EDKIWALAVGKKTEMFATGG--SDALVNLW 533
ED + +A + A+G D V +W
Sbjct: 303 EDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 259 (96.2 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 55/177 (31%), Positives = 85/177 (48%)
Query: 361 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG 420
++ Q N K + H K I+S+ +P+ + + S D+T +W D T G
Sbjct: 27 TESIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEG 86
Query: 421 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 480
HK GI + +S +++ +AS DKTIKIW + G +KT +GH V SF + IV
Sbjct: 87 HKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIV 146
Query: 481 SCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
S D V++W V TGEC H D + + + + +G D V +W +T
Sbjct: 147 SGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTT 203
Score = 228 (85.3 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 76/317 (23%), Positives = 145/317 (45%)
Query: 182 ISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE 241
+ + + + ++ P + L +AD+ + ++ + K E + L G+ E
Sbjct: 38 LKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYD---GKFE----RTLEGHKEG 90
Query: 242 ILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIV 301
I D+ + ++ + + A++ + ++++D+ S L GH E V + S+ LIV
Sbjct: 91 ISDIAW-SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSN---LIV 146
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS D +VR+WD + C + + H V V F++ +VSGS D T+++W
Sbjct: 147 SGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRD-GTLVVSGSYDGTVRIWD----- 200
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV-TFRG 420
Q +N + GK+++ + +PN V G+ D T +W + + T+ G
Sbjct: 201 TTTGQLLN----TISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTG 256
Query: 421 HKRGIWSV--EFSPV-DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 477
HK + + FS + ++T S D I I+++ ++T GH VL +
Sbjct: 257 HKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPT-E 315
Query: 478 QIVSCGA---DGLVKLW 491
I++ GA D VK+W
Sbjct: 316 NIIASGALEKDRSVKIW 332
Score = 205 (77.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 40/136 (29%), Positives = 72/136 (52%)
Query: 402 RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE 461
+T + + P+ + T +GH + I SV+FSP + + +AS DKTIKIW DG +T E
Sbjct: 26 QTESIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLE 85
Query: 462 GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 521
GH + ++ I S D +K+W V +G+ + T H++ ++ ++ ++ +
Sbjct: 86 GHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLI 145
Query: 522 ATGGSDALVNLWHDST 537
+G D V +W +T
Sbjct: 146 VSGSFDENVRIWDVNT 161
Score = 173 (66.0 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 32/94 (34%), Positives = 50/94 (53%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + +WDV+ G KGHK V + F+P ++ L+ SGS D VR+WD+ +C
Sbjct: 109 DKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSN--LIVSGSFDENVRIWDVNTGECTK 166
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
+ H VT + DG+ ++S D V +WD
Sbjct: 167 MISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWD 200
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 70/303 (23%), Positives = 128/303 (42%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 86
KGH +SS+ F PD L S S D T+++W K TL+ H ++ +A + D
Sbjct: 43 KGHLKSISSVKFSPDG--KWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 87 STLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGS-----AFDSFLSSYNQQ 140
+ SA DK + +WD+ T+ + E V V P + +FD + ++
Sbjct: 101 KLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVN 160
Query: 141 TIK-KKRRSLE------IHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGF 193
T + K S +HF G + ++ + +++ + + + +D K
Sbjct: 161 TGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDG-TVRIWDTTTGQLLNTISTEDGKE-V 218
Query: 194 TAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEE 251
+ P+ + +L T D L L++ KK K G+ E + F
Sbjct: 219 SFVKFSPNGKFVLAGTLDNTLRLWSYNN--NKKC----LKTYTGHKNEKYCIFSTFSVTC 272
Query: 252 EQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGS--KDNSV 309
+++ + + +Y+L + LAGH ++VL T A + +I +G+ KD SV
Sbjct: 273 GKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVL---TVACHPTENIIASGALEKDRSV 329
Query: 310 RLW 312
++W
Sbjct: 330 KIW 332
Score = 148 (57.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 8 ADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
AD+ + +W DG F +GHK +S I + D+ L+ S SDD T+++WD+ + K
Sbjct: 66 ADKTIKIWGAYDGKF-ERTLEGHKEGISDIAWSQDS--KLICSASDDKTIKIWDVESGKM 122
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
V TL H V ++ + ++S D+ V +WD+ C
Sbjct: 123 VKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGEC 164
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 237 (88.5 bits), Expect = 6.9e-24, Sum P(2) = 6.9e-24
Identities = 69/246 (28%), Positives = 115/246 (46%)
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
TC G+ LI +GS+D +VR++++ V V GH V +A + L +GS D
Sbjct: 276 TCLKWGGEGLIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDY--VLRTGSYD 333
Query: 350 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
HT K +D L + A+ V D+ A + ++ +GS D T +W
Sbjct: 334 HTGK--EYDTLEE---------AQRVALERYNDVK--AKSKGMEILISGSDDFTVIMWN- 379
Query: 410 PDLV--SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV 467
P + S+ GH++ I V FSP + +AS DK+IK+W G L F GH +V
Sbjct: 380 PSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAV 439
Query: 468 LRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 527
+ + + +VS D +K+W ++T + H D+++ + + A+G D
Sbjct: 440 YQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKD 499
Query: 528 ALVNLW 533
L+ +W
Sbjct: 500 RLLRIW 505
Score = 210 (79.0 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 95/402 (23%), Positives = 169/402 (42%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
C GH V + F PD K + G D TVR+WD+ TL H + V +A
Sbjct: 132 CASSMSGHTEAVLNCAFSPD-GKGFVSVGGD-TTVRIWDIYTSTPTHTLKGHTNWVLQVA 189
Query: 82 ITSDGSTLISAGRDKVVNLW----------DLRDYSCKLTVPTYEM--VEAVCAIPPGSA 129
+ D + +AG + + +W L+ ++ +T ++E + C S+
Sbjct: 190 WSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSS 249
Query: 130 FDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTIS-FEMDD 188
DS + ++ ++ K SL H ++V W + +Y S D T+ F D
Sbjct: 250 KDSTIRIWDTESCKNLM-SLSGHTMSV----TCLKWGGEGL-IYSG-SQDRTVRVFNTTD 302
Query: 189 SKRGFTAATVLPSNQGLLCVTA-DQQLLLYT-TVEVPEKKMELILSKRLVGYNEEILDLK 246
+ VL + + A + +L T + + K+ + + + V E D+K
Sbjct: 303 GR----LVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVAL-ERYNDVK 357
Query: 247 FLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCALSSGKILIVTGSK 305
+ + L ++ V +++ S S L GH +++ + + S + S
Sbjct: 358 AKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLI---NLVSFSPDGRYFASASF 414
Query: 306 DNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAE 365
D S++LWD +S +G GH+GAV V +S +LVSGS D T+K+W + E
Sbjct: 415 DKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSD-SRYLVSGSKDSTLKIWDIKTKKMEKE 473
Query: 366 QPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
P H ++ ++ +P+ V +GS+DR +W
Sbjct: 474 LP----------GHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 176 (67.0 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 65/309 (21%), Positives = 137/309 (44%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVY-DLSSMSCSYVLAGHSEIV--LCLDTC 291
L G+ +L + + + ++ +A A ++++ + L GH++ + L +
Sbjct: 178 LKGHTNWVLQVAWSPDSKK-IATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPF 236
Query: 292 ALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHT 351
L+ + + + SKD+++R+WD+ES + +GH +V + + + + SGS D T
Sbjct: 237 HLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGG--EGLIYSGSQDRT 294
Query: 352 IKVWSF-DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
++V++ DG + V+ H +N+LA+ D ++ TGS D T +
Sbjct: 295 VRVFNTTDG-----------RLVRVLDGHAHWVNTLALN-TDYVLRTGSYDHTGKEYDTL 342
Query: 411 DLVSVVTFRGHKRGIWSVEF-SPVDQVVITASGDKTIKIWSIS-DGSCLKTFEGHTSSVL 468
+ V + V+ S +++I+ S D T+ +W+ S + + GH +
Sbjct: 343 EEAQRVALERYN----DVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLIN 398
Query: 469 RASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 528
SF G S D +KLW ++G+ + + H ++ + + +G D+
Sbjct: 399 LVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDS 458
Query: 529 LVNLWHDST 537
+ +W T
Sbjct: 459 TLKIWDIKT 467
Score = 164 (62.8 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 54/207 (26%), Positives = 96/207 (46%)
Query: 288 LDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS 347
++T AL++ +L TGS D++ + +D+ V V A SK ++ L+SGS
Sbjct: 316 VNTLALNTDYVLR-TGSYDHTGKEYDTLEEA-QRVALERYNDVKAK--SKGME-ILISGS 370
Query: 348 SDHTIKVWSFDGLSDDAEQPMNLKAK-AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 406
D T+ +W+ P K + + H + IN ++ +P+ + S D++ +
Sbjct: 371 DDFTVIMWN----------PSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKL 420
Query: 407 WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 466
W + FRGH ++ V +S + +++ S D T+KIW I K GH
Sbjct: 421 WDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADE 480
Query: 467 VLRASFLTRGAQIVSCGADGLVKLWTV 493
V + G ++ S D L+++WTV
Sbjct: 481 VYTVDWSPDGDRVASGSKDRLLRIWTV 507
Score = 147 (56.8 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + +WD G F+GH G V + + +D L SGS D+T+++WD+ KK
Sbjct: 415 DKSIKLWDGQSGKFLGNFRGHVGAVYQVCW--SSDSRYLVSGSKDSTLKIWDIKTKKMEK 472
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
L H V ++ + DG + S +D+++ +W
Sbjct: 473 ELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 31/120 (25%), Positives = 60/120 (50%)
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQI 479
GH + + FSP + ++ GD T++IW I + T +GHT+ VL+ ++ +I
Sbjct: 138 GHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKI 197
Query: 480 VSCGADGLVKLWTVRTGECI-ATYDKHEDKIWALA-----VGKKTEMFATGGSDALVNLW 533
+ G +G +++W +TG+ + +T H I L+ + K A+ D+ + +W
Sbjct: 198 ATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIW 257
Score = 115 (45.5 bits), Expect = 6.9e-24, Sum P(2) = 6.9e-24
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW-DLLAKK 65
G D V +WD+ TH KGH V + + PD+ K + +G + +R+W K+
Sbjct: 159 GGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDS-KKIATAGME-GDIRIWCPQTGKQ 216
Query: 66 CVATLDKHFSRVTSMA-----ITSDGSTLISAGRDKVVNLWDLRDYSCK 109
+TL H +T ++ + L S+ +D + +WD SCK
Sbjct: 217 LGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTE--SCK 263
Score = 76 (31.8 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+C +++ H V + A + DG +S G D V +WD+
Sbjct: 131 RCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDI 169
Score = 46 (21.3 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 103 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIV 162
L S + T+ Y +AV + P + S +S + + + F++VG V
Sbjct: 105 LEGLSDETTLSIYYQPQAVFRVRPVTRCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTV 164
Query: 163 RMWN 166
R+W+
Sbjct: 165 RIWD 168
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 308 (113.5 bits), Expect = 8.5e-24, P = 8.5e-24
Identities = 123/553 (22%), Positives = 234/553 (42%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V WD+D C GH+ V ++ + +K L+ +G+ D+ +R WD+ +
Sbjct: 168 GKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSE-EKRLI-TGASDSELRAWDIAYLEE 225
Query: 67 VATLD-------KHFS-RVTSMAITSDGST-LISAGRDKVVN-------LWDLRDYSCKL 110
+ + K S R+ T DG+ + A D+++ + + RD L
Sbjct: 226 IEDPEEPEPKKIKGSSPRMQDTDETEDGTLEMDEAPEDRILTCRKAGSIMREGRDRVVNL 285
Query: 111 TVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA 170
V + A C G+ DS L + +I++ ++ ++ ++ + +
Sbjct: 286 AVDRTGRILA-CH---GT--DSVLEVFRVLSIEEIQKKMDKKLKKARKKAKLNSGKEEEE 339
Query: 171 CLYEQKSSDVTISFEMDDSKRGFTAAT-----VLPSNQG-LLCVTADQQLL--LYTTV-E 221
L + S ++T+ E+ T+A V+ S QG L V Q L LY+
Sbjct: 340 DL--EVSVEMTLQDEIQRVTNIKTSAKIKSFDVIHSPQGELKAVFLLQNNLVELYSVYPS 397
Query: 222 VPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGH 281
VP + + G+ ++ L F + L+ A E +++++ S++ C +
Sbjct: 398 VPASQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSGAA--ESIKIWNRSTLQCIRTMT-- 453
Query: 282 SEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN 341
E LC G +V G+K ++L+D S + H GA+ +++ S +
Sbjct: 454 CEYALC---SFFVPGDRQVVIGTKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRG 510
Query: 342 FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH-GKDINSLAVAPNDSLVCTGSQ 400
F V+G +D ++K W F+ + D+ L K +++ ++ +PN L+
Sbjct: 511 F-VTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLL 569
Query: 401 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 460
D T ++ + L ++ GHK + ++ S ++ T S D+ +KIW + G C K+
Sbjct: 570 DCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSL 629
Query: 461 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 520
H SV+ F+ + + G D +K W E + T + H +IW LA+ +
Sbjct: 630 FAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADKFEHVQTLEGHHQEIWCLAISPSGDY 689
Query: 521 FATGGSDALVNLW 533
+ D + LW
Sbjct: 690 VVSSSHDKSLRLW 702
Score = 196 (74.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 43/165 (26%), Positives = 79/165 (47%)
Query: 371 KAKAVVAAHG--KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 428
K + ++ G ++ L +P+ + G +D + ++ L VTF GHK + S+
Sbjct: 54 KGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSL 113
Query: 429 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 488
++ + + + S D I +W + + S L +GH ++ +A FL +VS G D +V
Sbjct: 114 KYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVSSGKDTMV 173
Query: 489 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
K W + T C T H ++W L + + + TG SD+ + W
Sbjct: 174 KWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAW 218
Score = 163 (62.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 41/160 (25%), Positives = 70/160 (43%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
P S +T GH+ + ++ FS D + + + ++IKIW+ S C++T T
Sbjct: 403 PVRTSRITIGGHRSDVRTLSFSS-DNIAVLSGAAESIKIWNRSTLQCIRTM---TCEYAL 458
Query: 470 ASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 528
SF G + V G G ++L+ + +G + T D H+ +W+L++ F TGG+D
Sbjct: 459 CSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADK 518
Query: 529 LVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYT 568
V W R +L+ VL Y+
Sbjct: 519 SVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYS 558
Score = 142 (55.0 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D ++VWDV + KGHK ++ LF +K+LL S D V+ WDL
Sbjct: 122 LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFL--REKNLLVSSGKDTMVKWWDLD 179
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+ C T+ H + V + + S+ LI+ D + WD+
Sbjct: 180 TQHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWDI 220
Score = 133 (51.9 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
ADR V +W +D G C H V + F P + L F+ D ++ WD + V
Sbjct: 611 ADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSH--LFFTAGKDRKIKQWDADKFEHV 668
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
TL+ H + +AI+ G ++S+ DK + LW+
Sbjct: 669 QTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWE 703
Score = 128 (50.1 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++ + G F GHK V+S+ + D L SGS D + VWD++ + +
Sbjct: 86 DGSIRIFSLLSGEGNVTFNGHKAAVTSLKY--DQLGGRLASGSKDTDIIVWDVINESGLY 143
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
L H +T + + L+S+G+D +V WDL C TV
Sbjct: 144 RLKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTV 187
Score = 124 (48.7 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 43/143 (30%), Positives = 69/143 (48%)
Query: 237 GYNEEILDLKF--LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
G+ + LK+ LG LA + + V+D+ + S Y L GH + + T AL
Sbjct: 105 GHKAAVTSLKYDQLGGR---LASGSKDTDIIVWDVINESGLYRLKGHKDAI----TQALF 157
Query: 295 -SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAV-GAVAFSKKLQNFLVSGSSDHTI 352
K L+V+ KD V+ WD +++ C GH V G V S++ + L++G+SD +
Sbjct: 158 LREKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKR--LITGASDSEL 215
Query: 353 KVWSFDGLSD--DAEQPMNLKAK 373
+ W L + D E+P K K
Sbjct: 216 RAWDIAYLEEIEDPEEPEPKKIK 238
Score = 99 (39.9 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 26/92 (28%), Positives = 45/92 (48%)
Query: 12 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 71
V +WD+ G +G K V+ + P D L G +D ++R++ LL+ + T +
Sbjct: 47 VFIWDLRKGEKILILQGLKHEVTCLC--PSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFN 104
Query: 72 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H + VTS+ G L S +D + +WD+
Sbjct: 105 GHKAAVTSLKYDQLGGRLASGSKDTDIIVWDV 136
Score = 88 (36.0 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 20/81 (24%), Positives = 40/81 (49%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K L +++ ++ LKF+ + + + +++ +D L GH + + CL A
Sbjct: 627 KSLFAHDDSVMYLKFVPKSHLFFTAGKD-RKIKQWDADKFEHVQTLEGHHQEIWCL---A 682
Query: 293 LSSGKILIVTGSKDNSVRLWD 313
+S +V+ S D S+RLW+
Sbjct: 683 ISPSGDYVVSSSHDKSLRLWE 703
>POMBASE|SPBC3D6.12 [details] [associations]
symbol:dip2 "U3 snoRNA associated protein Dip2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0030515
"snoRNA binding" evidence=ISO] [GO:0032040 "small-subunit
processome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC3D6.12 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032040 GO:GO:0030490
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 PIR:T40372 RefSeq:NP_595524.1
ProteinModelPortal:P87177 STRING:P87177 EnsemblFungi:SPBC3D6.12.1
GeneID:2540971 KEGG:spo:SPBC3D6.12 NextBio:20802086 Uniprot:P87177
Length = 922
Score = 307 (113.1 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 116/517 (22%), Positives = 218/517 (42%)
Query: 45 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
S L S D+ +++WDL + CV T H + +M ++ D ++AG V +W++
Sbjct: 186 SFLLSVGKDSFMKLWDLSIQHCVETHVDHQGEIWAMCVSPDAKRCLTAGTGSDVKVWEIS 245
Query: 105 DYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSY---NQQTIKKKR-RSLEIHFITVGERG 160
PT + + + S +Y N+ + + R LE+ F
Sbjct: 246 FPDDNNFTPTTKAFQQLGTFTRQSRDRPITLAYDVSNRYVVFQAHDRLLEV-FRLRSSAE 304
Query: 161 IVRMWNADSACLYEQKSSDVTISFEMDDSKRGFT-------AATV--LPSNQGLLCVTAD 211
+ ++ N +KS DV+I+ + D F A++V +P N+ VT+
Sbjct: 305 LEKILNRRRR---RKKSEDVSITLK--DEYEPFALIRTTARASSVAWIPGNRTPTLVTSL 359
Query: 212 QQ--LLLYTTVEVPEKKMELILSKR--------LVGYNEEILDLKFLGEEEQYLAVATNI 261
Q + +Y ++V + L++R + G+ ++ L + L+ A
Sbjct: 360 QNNSIEVYA-LDVKSEGSAAPLTERASRISAIEIPGHRADVRTLALSANHDVILSGANG- 417
Query: 262 EQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVG 321
+++++ + SC + E L +++ K IV+ K + ++D S +
Sbjct: 418 -SLKLWNKKTTSCIRTI----ECGYVLAASFINNDKC-IVSAYKSGELEVYDIASSSLIE 471
Query: 322 VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS----FDGLSDDAEQPMNLKAKAVVA 377
H GA+ +A + + S+DHT+K+WS FD + + LK +
Sbjct: 472 RIQAHDGAIWDLAVGHD-GTYFATASADHTVKLWSLKSSFDFVPGTTRKVTTLKLEQTRQ 530
Query: 378 AH-GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQV 436
D+ ++ ++P+ V D T V+ L L + GHK + S++ S ++
Sbjct: 531 IDFTDDVLAVKISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKL 590
Query: 437 VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 496
++T S DK +KIW + G C K+ H S++ +F +C D V+ W ++
Sbjct: 591 LVTCSADKNVKIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYNFFTCSKDREVRYWDGKSF 650
Query: 497 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ I H ++WALAVG +G D + LW
Sbjct: 651 DLILKLRGHHSEVWALAVGPT--FVVSGSHDHSIRLW 685
Score = 132 (51.5 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 112/531 (21%), Positives = 203/531 (38%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLF-SGSDDATVRVWD 60
F L G D + +WD+ C H+G + ++ PD + L +GSD V+VW+
Sbjct: 187 FLLSVGKDSFMKLWDLSIQHCVETHVDHQGEIWAMCVSPDAKRCLTAGTGSD---VKVWE 243
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV-PTYEMVE 119
+ D +F+ T A G T RD+ + L D S + V ++ +
Sbjct: 244 ISFPD-----DNNFTPTTK-AFQQLG-TFTRQSRDRPITL--AYDVSNRYVVFQAHDRLL 294
Query: 120 AVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHF---------ITVGERGIVRMW---NA 167
V + + + L N++ +KK + I I R W N
Sbjct: 295 EVFRLRSSAELEKIL---NRRRRRKKSEDVSITLKDEYEPFALIRTTARASSVAWIPGNR 351
Query: 168 DSACLYEQKSSDVTISFEMDDSKRGFTA----------ATVLPSNQG---LLCVTADQQL 214
+ +++ + + + +D G A A +P ++ L ++A+ +
Sbjct: 352 TPTLVTSLQNNSIEV-YALDVKSEGSAAPLTERASRISAIEIPGHRADVRTLALSANHDV 410
Query: 215 LLYT---TVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSS 271
+L ++++ KK + GY +L F+ ++ ++ A +++VYD++S
Sbjct: 411 ILSGANGSLKLWNKKTTSCIRTIECGY---VLAASFINNDKCIVS-AYKSGELEVYDIAS 466
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVG 331
S + H + L A+ T S D++V+LW +S GT
Sbjct: 467 SSLIERIQAHDGAIWDL---AVGHDGTYFATASADHTVKLWSLKSSFDFVPGTTRK---- 519
Query: 332 AVAFSKKLQNFLVSGSSDH-TIKVWSFDG------LSDDAEQPM---NLKAKAVVAAHGK 381
V K Q + + D +K+ S DG L D+ + +LK + H
Sbjct: 520 -VTTLKLEQTRQIDFTDDVLAVKI-SPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKL 577
Query: 382 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 441
+ S+ ++ + L+ T S D+ +W L + H+ I V F P T S
Sbjct: 578 PVLSMDISYDSKLLVTCSADKNVKIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYNFFTCS 637
Query: 442 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW 491
D+ ++ W + GH S V L G V G+ D ++LW
Sbjct: 638 KDREVRYWDGKSFDLILKLRGHHSEVWA---LAVGPTFVVSGSHDHSIRLW 685
Score = 126 (49.4 bits), Expect = 0.00042, P = 0.00042
Identities = 31/99 (31%), Positives = 47/99 (47%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD+ V +W +D G C H+ + + F PDT F+ S D VR WD + +
Sbjct: 596 ADKNVKIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYN--FFTCSKDREVRYWDGKSFDLI 653
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAG-RDKVVNLWDLRD 105
L H S V ++A+ G T + +G D + LW+ D
Sbjct: 654 LKLRGHHSEVWALAV---GPTFVVSGSHDHSIRLWEQGD 689
Score = 114 (45.2 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 72/305 (23%), Positives = 125/305 (40%)
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-- 288
L +R+ ++ I DL +G + Y A A+ V+++ L S S +V G + V L
Sbjct: 469 LIERIQAHDGAIWDLA-VGHDGTYFATASADHTVKLWSLKS-SFDFV-PGTTRKVTTLKL 525
Query: 289 ----------DTCA--LSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAVGA--V 333
D A +S + DN+V+++ +S + + + GH V + +
Sbjct: 526 EQTRQIDFTDDVLAVKISPDGRFVAASLLDNTVKVYYLDSLKFFLNL-YGHKLPVLSMDI 584
Query: 334 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 393
++ KL LV+ S+D +K+W D D + + AH I + P+
Sbjct: 585 SYDSKL---LVTCSADKNVKIWGLD--FGDCHKS--------IFAHQDSIMEVTFQPDTY 631
Query: 394 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
T S+DR W ++ RGH +W++ P V++ S D +I++W
Sbjct: 632 NFFTCSKDREVRYWDGKSFDLILKLRGHHSEVWALAVGPT--FVVSGSHDHSIRLWE--Q 687
Query: 454 GSCLKTFEGHTSSVLRASF-LTRGAQIVSCGADGLVKLWTVR--TGECIATYDKHEDKIW 510
G L E L + T + + ADG VK V T + I + E +
Sbjct: 688 GDDLVFLEEERERELEEQYESTLVSSYENAEADGEVKDGDVAAVTKQTIESLKDGEKILE 747
Query: 511 ALAVG 515
A+ +G
Sbjct: 748 AITIG 752
Score = 88 (36.0 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 41/203 (20%), Positives = 89/203 (43%)
Query: 3 ALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
A++ G + VL WD+ G +K + + + D+ + G D ++R+W
Sbjct: 38 AIVGGLE-SVLEWDLKTGQLLSKWKD-SDCSAKVTCIANFDE-MYAVGYADGSIRLWK-- 92
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS--CKLTVPTYEMVEA 120
+ + TL+ H S VT+M G+ L S D + +WD+ + +L ++ +
Sbjct: 93 DGELLITLNGHKSAVTTMDFDKMGTRLASGSMDTDIIVWDIVAETGLFRLRGHKDQITKL 152
Query: 121 VCAIPPG--SAFDSFLSS-YNQQTIKKKRRSLEIHFITVGERGIVRMWNAD-SACL--YE 174
+ PP +A ++ + + + + +S + ++VG+ +++W+ C+ +
Sbjct: 153 LFITPPSKNTAEETVVDTDIDSGDMDVDSKSSDSFLLSVGKDSFMKLWDLSIQHCVETHV 212
Query: 175 QKSSDVTISFEMDDSKRGFTAAT 197
++ D+KR TA T
Sbjct: 213 DHQGEIWAMCVSPDAKRCLTAGT 235
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 281 (104.0 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 79/303 (26%), Positives = 137/303 (45%)
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L + G+ + I + F ++Q LA + ++++ + +Y L GH + V+C+
Sbjct: 12 LERHFRGHRDAITSVDFSLNKKQ-LASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQF 70
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
SG L+ +GS+D +V LW + V H V +V FS Q+ LV+ S D
Sbjct: 71 SP--SGH-LVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQS-LVTASDDK 126
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
TIKVW+ K ++ H + +P+ L+ + S D+T +W
Sbjct: 127 TIKVWTVH----------RQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKT 176
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
+ +F H VEF P + A DKT+K+W + L+ ++ HT++V
Sbjct: 177 SRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSL 236
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 530
SF G +++ D +K+ + G + T H+ +A + + FA+GGSD V
Sbjct: 237 SFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQV 296
Query: 531 NLW 533
+W
Sbjct: 297 MVW 299
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D+ V VWDV +++ H V+S+ FHP + L + S+D+T+++ DLL +
Sbjct: 207 GTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGN--YLITASNDSTLKILDLLEGRL 264
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
+ TL H T +A + G S G D+ V +W
Sbjct: 265 LYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 9 DRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
D+ V +W V G + FK H V S+ H +D L + SDD T++VW + +K
Sbjct: 83 DKTVCLWVPSVKGE--STVFKAHTATVRSV--HFSSDGQSLVTASDDKTIKVWTVHRQKF 138
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+ +L +H + V + DG + SA DK V LWD C
Sbjct: 139 LFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSREC 180
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +WD C H F H G + + FHP + + + D TV+VWD+ + +
Sbjct: 167 DKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSG--TCIAAAGTDKTVKVWDVRMNRLLQ 224
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H + V S++ G+ LI+A D + + DL
Sbjct: 225 HYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDL 259
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 29/96 (30%), Positives = 46/96 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + VW V H V F PD L+ S SDD TV++WD +++C+
Sbjct: 125 DKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDG--RLIASASDDKTVKLWDKTSRECIH 182
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+ +H + G+ + +AG DK V +WD+R
Sbjct: 183 SFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVR 218
Score = 118 (46.6 bits), Expect = 0.00064, P = 0.00064
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D + +W + + GHK V + F P L+ SGS D TV +W +
Sbjct: 35 LASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGH--LVASGSRDKTVCLW-VP 91
Query: 63 AKKCVATLDK-HFSRVTSMAITSDGSTLISAGRDKVVNLW 101
+ K +T+ K H + V S+ +SDG +L++A DK + +W
Sbjct: 92 SVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVW 131
>WB|WBGene00017435 [details] [associations]
symbol:F13H8.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:FO080709 RefSeq:NP_495256.1
ProteinModelPortal:Q19433 SMR:Q19433 DIP:DIP-25827N
MINT:MINT-1128581 STRING:Q19433 PaxDb:Q19433 EnsemblMetazoa:F13H8.2
GeneID:174038 KEGG:cel:CELE_F13H8.2 UCSC:F13H8.2 CTD:174038
WormBase:F13H8.2 InParanoid:Q19433 NextBio:882237 Uniprot:Q19433
Length = 929
Score = 228 (85.3 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 70/301 (23%), Positives = 131/301 (43%)
Query: 236 VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS- 294
+G+ E++ L + LA E + V+ S+ S L + D A++
Sbjct: 406 LGHREDVRAL-CVSSSSSLLASGGGNEVI-VWSTHSLRSSLTLTDND----IKDIVAVNF 459
Query: 295 -SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
G I+TG K+ + +++ S V H GA+ + S + F ++ S+D T++
Sbjct: 460 VPGDNYILTGGKNGEIGVFELSSAELVETRKAHTGAIWTIQNSPDNEGF-ITASADKTVR 518
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
WSF +++ + + +++K + V+ + + + A LV + T V+ + L
Sbjct: 519 FWSFVLVTEGSRKRISIKEQKVLELPDEALAASFSADGKFLV-VALLNNTCSVYFVNTLK 577
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
V+ GH + V+ +P ++ +T S DK++K+W + G C K+F H +V F
Sbjct: 578 FFVSLYGHSLPVTCVDIAPSSKLCVTGSVDKSVKVWGLDFGDCHKSFHAHDDAVTSVLFC 637
Query: 474 TRGAQIV-SCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 532
Q+ S G DG +K W + D+H I LA + + D +
Sbjct: 638 PGEEQLFWSAGKDGKIKQWDAVKFIMVQVLDRHTLDIRCLAQFTNGSVMFSASHDKSIRC 697
Query: 533 W 533
W
Sbjct: 698 W 698
Score = 166 (63.5 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 127/568 (22%), Positives = 233/568 (41%)
Query: 7 GADRKVLVWDV---DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 63
G D +++WD+ G F H GHK V+ + F D+ ++ S S D+ ++ W + +
Sbjct: 122 GKDGVIVLWDILAERGMFRLH---GHKESVTQMKFVRG-DRFII-STSKDSLIKFWSIAS 176
Query: 64 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR-------DYSCKLTVPTYE 116
+ C T+ + + SM++ D + L++A + + +++L + K P+ +
Sbjct: 177 QSCFYTVMDSRNEIYSMSLHRDETVLVAATAELELLVFELNWKNGAIFEQEVKSEEPSAK 236
Query: 117 MV----EAVCAIPPGSAFDSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWN---AD 168
E + A + + I++ K R+L++ T +R +V + AD
Sbjct: 237 KATNDDEKEDDVLANMANRYITTKLRGRVIRQSKGRALQL-VATHDDRFLVCVGADKVAD 295
Query: 169 SACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVE-VPEKKM 227
++ + S ++ ++ +KR T+ T + V D +L+ E V K+
Sbjct: 296 VYRVFSETESAKRLTKKLKSAKRKATSDTTTVNEDD---VAKDVTILVTRIGEMVLPHKI 352
Query: 228 ELILSKRLVGYNEEILDLKF--LGEEEQYLAVATNIEQVQVYDLSSMSCSYV----LAGH 281
+ I R V NE L K+ L + V +IE +S+ C V GH
Sbjct: 353 KWIDVVRSVKTNENTLIYKWYALLTDNTVHWVKMSIETTS----NSVECDSVGNLDKLGH 408
Query: 282 SEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAVGAVAFSKKLQ 340
E V L C SS +L G N V +W + S R + + + + AV F
Sbjct: 409 REDVRAL--CVSSSSSLLASGGG--NEVIVWSTHSLRSSLTLTDNDIKDIVAVNFVPG-D 463
Query: 341 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 400
N++++G + I V+ LS AE KA H I ++ +P++ T S
Sbjct: 464 NYILTGGKNGEIGVFE---LSS-AELVETRKA------HTGAIWTIQNSPDNEGFITASA 513
Query: 401 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFS----PVDQVVITASGDKTIKIWSISDGSC 456
D+T W V+ G ++ I E P + + + S D + ++ + +C
Sbjct: 514 DKTVRFWSF-----VLVTEGSRKRISIKEQKVLELPDEALAASFSADGKFLVVALLNNTC 568
Query: 457 -------LKTFE---GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 506
LK F GH+ V V+ D VK+W + G+C ++ H+
Sbjct: 569 SVYFVNTLKFFVSLYGHSLPVTCVDIAPSSKLCVTGSVDKSVKVWGLDFGDCHKSFHAHD 628
Query: 507 DKIWA-LAVGKKTEMFATGGSDALVNLW 533
D + + L + ++F + G D + W
Sbjct: 629 DAVTSVLFCPGEEQLFWSAGKDGKIKQW 656
Score = 158 (60.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 32/97 (32%), Positives = 50/97 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VW +D G C F H V+S+LF P ++ L +S D ++ WD + V
Sbjct: 607 DKSVKVWGLDFGDCHKSFHAHDDAVTSVLFCPG-EEQLFWSAGKDGKIKQWDAVKFIMVQ 665
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
LD+H + +A ++GS + SA DK + W+ D
Sbjct: 666 VLDRHTLDIRCLAQFTNGSVMFSASHDKSIRCWEKTD 702
Score = 134 (52.2 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 37/153 (24%), Positives = 68/153 (44%)
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV-VTFRGHKRGIWSVEFSPVDQVVIT 439
K I+ + N L+ G D + ++ + S + F GHK+ + +EFS + T
Sbjct: 61 KPISCVRQCENKPLLAIGYADGSVKLFNQENEDSEPIMFSGHKKAVNCIEFSSDGLLFAT 120
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
D I +W I + GH SV + F+ I+S D L+K W++ + C
Sbjct: 121 GGKDGVIVLWDILAERGMFRLHGHKESVTQMKFVRGDRFIISTSKDSLIKFWSIASQSCF 180
Query: 500 ATYDKHEDKIWALAVGKKTEMF--ATGGSDALV 530
T ++I+++++ + + AT + LV
Sbjct: 181 YTVMDSRNEIYSMSLHRDETVLVAATAELELLV 213
Score = 131 (51.2 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 30/88 (34%), Positives = 43/88 (48%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFS-GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 84
F GHK V+ I F D LLF+ G D + +WD+LA++ + L H VT M
Sbjct: 99 FSGHKKAVNCIEFSSD---GLLFATGGKDGVIVLWDILAERGMFRLHGHKESVTQMKFVR 155
Query: 85 DGSTLISAGRDKVVNLWDLRDYSCKLTV 112
+IS +D ++ W + SC TV
Sbjct: 156 GDRFIISTSKDSLIKFWSIASQSCFYTV 183
Score = 125 (49.1 bits), Expect = 0.00054, P = 0.00054
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
L G +D ++K+ F+ ++D+E P+ + + H K +N + + + L TG +D
Sbjct: 75 LAIGYADGSVKL--FNQENEDSE-PI------MFSGHKKAVNCIEFSSDGLLFATGGKDG 125
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
+W + + GHK + ++F D+ +I+ S D IK WSI+ SC T
Sbjct: 126 VIVLWDILAERGMFRLHGHKESVTQMKFVRGDRFIISTSKDSLIKFWSIASQSCFYT 182
Score = 109 (43.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 39/152 (25%), Positives = 70/152 (46%)
Query: 206 LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQ 265
+ V+A++ L Y + EK E+I S + + + E + LA+ V+
Sbjct: 34 VAVSANEYLNFYN-MRTAEKVNEIIESTKPISCVRQC-------ENKPLLAIGYADGSVK 85
Query: 266 VYDLSSMSCSYVL-AGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 324
+++ + ++ +GH + V C++ SS +L TG KD + LWD + +
Sbjct: 86 LFNQENEDSEPIMFSGHKKAVNCIE---FSSDGLLFATGGKDGVIVLWDILAERGMFRLH 142
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
GH +V + F + F++S S D IK WS
Sbjct: 143 GHKESVTQMKFVRG-DRFIISTSKDSLIKFWS 173
Score = 77 (32.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 31/122 (25%), Positives = 49/122 (40%)
Query: 333 VAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND 392
+A S KL V+GS D ++KVW D D + + AH + S+ P +
Sbjct: 594 IAPSSKL---CVTGSVDKSVKVWGLD--FGDCHKSFH--------AHDDAVTSVLFCPGE 640
Query: 393 S-LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
L + +D W + V H I + V+ +AS DK+I+ W
Sbjct: 641 EQLFWSAGKDGKIKQWDAVKFIMVQVLDRHTLDIRCLAQFTNGSVMFSASHDKSIRCWEK 700
Query: 452 SD 453
+D
Sbjct: 701 TD 702
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 256 (95.2 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 81/293 (27%), Positives = 138/293 (47%)
Query: 250 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 309
++ +YL A IE+ ++ + + S VL GH + V+ TC +L VTGS DN++
Sbjct: 226 DKSRYLR-ADKIEKN--WNANPIMGSAVLRGHEDHVI---TCMQIHDDVL-VTGSDDNTL 278
Query: 310 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 369
++W + + GH G V S+ ++VSGS+D T+KVWS + D
Sbjct: 279 KVWCIDKGEVMYTLVGHTGGVWTSQISQ-CGRYIVSGSTDRTVKVWS----TVDGSLLHT 333
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
L+ H + +A+A S++ TGS+D T VW + + T GH + V+
Sbjct: 334 LQG------HTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQ 385
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
F V++ D T+KIW+ G C++T GH + V F + + + S D ++
Sbjct: 386 FDGT--TVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIR 443
Query: 490 LW--TVRTG-ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW--HDST 537
+W T G EC+A H + + + + + +D+ V +W H+ T
Sbjct: 444 VWDFTRPEGQECVALLQGHTSLTSGMQL--RGNILVSCNADSHVRVWDIHEGT 494
Score = 248 (92.4 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 69/238 (28%), Positives = 107/238 (44%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV+GS D +V++W + + GH V +A + + LV+GS D T++VW
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI---LVTGSRDTTLRVW---- 363
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
D E +L HG V + + V +G D T +W + T
Sbjct: 364 ---DVESGRHL-----ATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLT 415
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS--DGS-CLKTFEGHTSSVLRASFLTRG 476
GH ++S+ F +V + S D +I++W + +G C+ +GHTS L + RG
Sbjct: 416 GHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS--LTSGMQLRG 473
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA-VGKKTEMFATGGSDALVNLW 533
+VSC AD V++W + G C+ H I +L G+ M AT D V LW
Sbjct: 474 NILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLW 529
Score = 247 (92.0 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 69/250 (27%), Positives = 116/250 (46%)
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
+Y+ + V+V+ S + L GH+ V C+ A++ G IL VTGS+D ++R+W
Sbjct: 309 RYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCM---AMA-GSIL-VTGSRDTTLRVW 363
Query: 313 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 372
D ES + GH AV V F +VSG D T+K+W+ A ++
Sbjct: 364 DVESGRHLATLHGHHAAVRCVQFDGTT---VVSGGYDFTVKIWN-------AHTGRCIRT 413
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL--PD-LVSVVTFRGHKRGIWSVE 429
+ H + SL S+VC+GS D + VW P+ V +GH ++
Sbjct: 414 ---LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQ 470
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
++++ + D +++W I +G+C+ GH S++ + R + + DG VK
Sbjct: 471 LR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVATSSDDGTVK 527
Query: 490 LWTVRTGECI 499
LW + G I
Sbjct: 528 LWDIERGALI 537
Score = 171 (65.3 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 49/195 (25%), Positives = 93/195 (47%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D+ S L GH V C+ + +V+G D +V++W++ + C+
Sbjct: 360 LRVWDVESGRHLATLHGHHAAVRCVQFDGTT-----VVSGGYDFTVKIWNAHTGRCIRTL 414
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
TGH V ++ F + ++ + SGS D +I+VW F +P + A++ H
Sbjct: 415 TGHNNRVYSLLFESE-RSIVCSGSLDTSIRVWDFT-------RPEGQECVALLQGHTSLT 466
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
+ + + N + C D VW + + V GH+ I S+++ + V T+S D
Sbjct: 467 SGMQLRGNILVSCNA--DSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVA-TSSDD 523
Query: 444 KTIKIWSISDGSCLK 458
T+K+W I G+ ++
Sbjct: 524 GTVKLWDIERGALIR 538
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL---A 63
G D V +W+ G C GH V S+LF ++++S++ SGS D ++RVWD
Sbjct: 395 GYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLF--ESERSIVCSGSLDTSIRVWDFTRPEG 452
Query: 64 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
++CVA L H S + M + G+ L+S D V +WD+ + +C
Sbjct: 453 QECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTC 495
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ DR V VW G H +GH V + S+L +GS D T+RVWD+
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG----SILVTGSRDTTLRVWDVE 366
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
+ + +ATL H + V + DG+T++S G D V +W+ C T+
Sbjct: 367 SGRHLATLHGHHAAVR--CVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTL 414
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 32/100 (32%), Positives = 50/100 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+ D + VWDV+ G GH V + F D + + SG D TV++W+
Sbjct: 351 LVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF----DGTTVVSGGYDFTVKIWNAH 406
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
+C+ TL H +RV S+ S+ S + S D + +WD
Sbjct: 407 TGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Score = 103 (41.3 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKG-VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
AD+ W+ + + +GH+ V++ + H D +L +GSDD T++VW + +
Sbjct: 233 ADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD----VLVTGSDDNTLKVWCIDKGEV 288
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
+ TL H V + I+ G ++S D+ V +W D S
Sbjct: 289 MYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS 329
Score = 40 (19.1 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHF 153
AF L N I++ R +E HF
Sbjct: 95 AFTRLLQESNMTNIRQLRAIIEPHF 119
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 256 (95.2 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 81/293 (27%), Positives = 138/293 (47%)
Query: 250 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 309
++ +YL A IE+ ++ + + S VL GH + V+ TC +L VTGS DN++
Sbjct: 226 DKSRYLR-ADKIEKN--WNANPIMGSAVLRGHEDHVI---TCMQIHDDVL-VTGSDDNTL 278
Query: 310 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 369
++W + + GH G V S+ ++VSGS+D T+KVWS + D
Sbjct: 279 KVWCIDKGEVMYTLVGHTGGVWTSQISQ-CGRYIVSGSTDRTVKVWS----TVDGSLLHT 333
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
L+ H + +A+A S++ TGS+D T VW + + T GH + V+
Sbjct: 334 LQG------HTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQ 385
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
F V++ D T+KIW+ G C++T GH + V F + + + S D ++
Sbjct: 386 FDGT--TVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIR 443
Query: 490 LW--TVRTG-ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW--HDST 537
+W T G EC+A H + + + + + +D+ V +W H+ T
Sbjct: 444 VWDFTRPEGQECVALLQGHTSLTSGMQL--RGNILVSCNADSHVRVWDIHEGT 494
Score = 248 (92.4 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 69/238 (28%), Positives = 107/238 (44%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV+GS D +V++W + + GH V +A + + LV+GS D T++VW
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI---LVTGSRDTTLRVW---- 363
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
D E +L HG V + + V +G D T +W + T
Sbjct: 364 ---DVESGRHL-----ATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLT 415
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS--DGS-CLKTFEGHTSSVLRASFLTRG 476
GH ++S+ F +V + S D +I++W + +G C+ +GHTS L + RG
Sbjct: 416 GHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS--LTSGMQLRG 473
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA-VGKKTEMFATGGSDALVNLW 533
+VSC AD V++W + G C+ H I +L G+ M AT D V LW
Sbjct: 474 NILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLW 529
Score = 247 (92.0 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 69/250 (27%), Positives = 116/250 (46%)
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
+Y+ + V+V+ S + L GH+ V C+ A++ G IL VTGS+D ++R+W
Sbjct: 309 RYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCM---AMA-GSIL-VTGSRDTTLRVW 363
Query: 313 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 372
D ES + GH AV V F +VSG D T+K+W+ A ++
Sbjct: 364 DVESGRHLATLHGHHAAVRCVQFDGTT---VVSGGYDFTVKIWN-------AHTGRCIRT 413
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL--PD-LVSVVTFRGHKRGIWSVE 429
+ H + SL S+VC+GS D + VW P+ V +GH ++
Sbjct: 414 ---LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQ 470
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
++++ + D +++W I +G+C+ GH S++ + R + + DG VK
Sbjct: 471 LR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVATSSDDGTVK 527
Query: 490 LWTVRTGECI 499
LW + G I
Sbjct: 528 LWDIERGALI 537
Score = 171 (65.3 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 49/195 (25%), Positives = 93/195 (47%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D+ S L GH V C+ + +V+G D +V++W++ + C+
Sbjct: 360 LRVWDVESGRHLATLHGHHAAVRCVQFDGTT-----VVSGGYDFTVKIWNAHTGRCIRTL 414
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
TGH V ++ F + ++ + SGS D +I+VW F +P + A++ H
Sbjct: 415 TGHNNRVYSLLFESE-RSIVCSGSLDTSIRVWDFT-------RPEGQECVALLQGHTSLT 466
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
+ + + N + C D VW + + V GH+ I S+++ + V T+S D
Sbjct: 467 SGMQLRGNILVSCNA--DSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVA-TSSDD 523
Query: 444 KTIKIWSISDGSCLK 458
T+K+W I G+ ++
Sbjct: 524 GTVKLWDIERGALIR 538
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL---A 63
G D V +W+ G C GH V S+LF ++++S++ SGS D ++RVWD
Sbjct: 395 GYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLF--ESERSIVCSGSLDTSIRVWDFTRPEG 452
Query: 64 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
++CVA L H S + M + G+ L+S D V +WD+ + +C
Sbjct: 453 QECVALLQGHTSLTSGMQLR--GNILVSCNADSHVRVWDIHEGTC 495
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/110 (32%), Positives = 56/110 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ DR V VW G H +GH V + S+L +GS D T+RVWD+
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG----SILVTGSRDTTLRVWDVE 366
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
+ + +ATL H + V + DG+T++S G D V +W+ C T+
Sbjct: 367 SGRHLATLHGHHAAVR--CVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTL 414
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 32/100 (32%), Positives = 50/100 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+ D + VWDV+ G GH V + F D + + SG D TV++W+
Sbjct: 351 LVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF----DGTTVVSGGYDFTVKIWNAH 406
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
+C+ TL H +RV S+ S+ S + S D + +WD
Sbjct: 407 TGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Score = 103 (41.3 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKG-VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
AD+ W+ + + +GH+ V++ + H D +L +GSDD T++VW + +
Sbjct: 233 ADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD----VLVTGSDDNTLKVWCIDKGEV 288
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
+ TL H V + I+ G ++S D+ V +W D S
Sbjct: 289 MYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS 329
Score = 40 (19.1 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHF 153
AF L N I++ R +E HF
Sbjct: 95 AFTRLLQESNMTNIRQLRAIIEPHF 119
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 280 (103.6 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 83/314 (26%), Positives = 145/314 (46%)
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 6 KPNYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 61
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 345
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 62 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 120
Query: 346 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 405
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 121 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 170
Query: 406 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ GH
Sbjct: 171 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 230
Query: 465 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 521
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 231 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 290
Query: 522 ATGG--SDALVNLW 533
A+ +D + LW
Sbjct: 291 ASAALENDKTIKLW 304
Score = 191 (72.3 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ +D K L +WDV G C KGH V F+P ++ L+ SGS D +VR+WD+
Sbjct: 76 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVK 133
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 134 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 183
Score = 188 (71.2 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 7 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 66
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 67 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 126
Query: 530 VNLWHDST 537
V +W T
Sbjct: 127 VRIWDVKT 134
Score = 171 (65.3 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 8 ADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
AD+ + +W DG F GHK +S + + +D +LL S SDD T+++WD+ + KC
Sbjct: 39 ADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKC 95
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIP 125
+ TL H + V + ++S D+ V +WD++ C T+P + + V AV
Sbjct: 96 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 155
Query: 126 PGSAFDSFLSSYN 138
GS S SSY+
Sbjct: 156 DGSLIVS--SSYD 166
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 65/302 (21%), Positives = 123/302 (40%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 17 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 74
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 141
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 75 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 134
Query: 142 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 195
K ++L H V + ++ + D C +S + +DD +
Sbjct: 135 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 193
Query: 196 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 253
P+ + +L T D L L+ K + + K G+ E + F +
Sbjct: 194 VKFSPNGKYILAATLDNTLKLWDY-----SKGKCL--KTYTGHKNEKYCIFANFSVTGGK 246
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
++ + V +++L + L GH+++V+ C + I D +++LW
Sbjct: 247 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWK 305
Query: 314 SE 315
S+
Sbjct: 306 SD 307
Score = 145 (56.1 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 67/307 (21%), Positives = 136/307 (44%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 71
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 186
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 72 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 123
Query: 187 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 234
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 124 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 183
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 293
+ N + +KF +Y+ AT ++++D S C GH C+ ++
Sbjct: 184 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 242
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 351
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 243 TGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 300
Query: 352 IKVWSFD 358
IK+W D
Sbjct: 301 IKLWKSD 307
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 280 (103.6 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 83/314 (26%), Positives = 145/314 (46%)
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 87
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 345
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 88 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 146
Query: 346 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 405
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 147 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 406 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ GH
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 465 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 521
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 522 ATGG--SDALVNLW 533
A+ +D + LW
Sbjct: 317 ASAALENDKTIKLW 330
Score = 191 (72.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ +D K L +WDV G C KGH V F+P ++ L+ SGS D +VR+WD+
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVK 159
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 188 (71.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 530 VNLWHDST 537
V +W T
Sbjct: 153 VRIWDVKT 160
Score = 171 (65.3 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 8 ADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
AD+ + +W DG F GHK +S + + +D +LL S SDD T+++WD+ + KC
Sbjct: 65 ADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIP 125
+ TL H + V + ++S D+ V +WD++ C T+P + + V AV
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 126 PGSAFDSFLSSYN 138
GS S SSY+
Sbjct: 182 DGSLIVS--SSYD 192
Score = 166 (63.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 65/302 (21%), Positives = 123/302 (40%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 43 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 141
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 142 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 195
K ++L H V + ++ + D C +S + +DD +
Sbjct: 161 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 196 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 253
P+ + +L T D L L+ K + + K G+ E + F +
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDY-----SKGKCL--KTYTGHKNEKYCIFANFSVTGGK 272
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
++ + V +++L + L GH+++V+ C + I D +++LW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWK 331
Query: 314 SE 315
S+
Sbjct: 332 SD 333
Score = 145 (56.1 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 67/307 (21%), Positives = 136/307 (44%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 97
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 186
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 98 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 149
Query: 187 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 234
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 293
+ N + +KF +Y+ AT ++++D S C GH C+ ++
Sbjct: 210 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 351
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 269 TGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 326
Query: 352 IKVWSFD 358
IK+W D
Sbjct: 327 IKLWKSD 333
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 280 (103.6 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 83/314 (26%), Positives = 145/314 (46%)
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 87
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 345
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 88 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 146
Query: 346 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 405
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 147 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 406 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ GH
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 465 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 521
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 522 ATGG--SDALVNLW 533
A+ +D + LW
Sbjct: 317 ASAALENDKTIKLW 330
Score = 191 (72.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ +D K L +WDV G C KGH V F+P ++ L+ SGS D +VR+WD+
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVK 159
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 188 (71.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 530 VNLWHDST 537
V +W T
Sbjct: 153 VRIWDVKT 160
Score = 171 (65.3 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 8 ADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
AD+ + +W DG F GHK +S + + +D +LL S SDD T+++WD+ + KC
Sbjct: 65 ADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIP 125
+ TL H + V + ++S D+ V +WD++ C T+P + + V AV
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 126 PGSAFDSFLSSYN 138
GS S SSY+
Sbjct: 182 DGSLIVS--SSYD 192
Score = 166 (63.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 65/302 (21%), Positives = 123/302 (40%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 43 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 141
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 142 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 195
K ++L H V + ++ + D C +S + +DD +
Sbjct: 161 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 196 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 253
P+ + +L T D L L+ K + + K G+ E + F +
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDY-----SKGKCL--KTYTGHKNEKYCIFANFSVTGGK 272
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
++ + V +++L + L GH+++V+ C + I D +++LW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWK 331
Query: 314 SE 315
S+
Sbjct: 332 SD 333
Score = 145 (56.1 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 67/307 (21%), Positives = 136/307 (44%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 97
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 186
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 98 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 149
Query: 187 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 234
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 293
+ N + +KF +Y+ AT ++++D S C GH C+ ++
Sbjct: 210 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 351
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 269 TGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 326
Query: 352 IKVWSFD 358
IK+W D
Sbjct: 327 IKLWKSD 333
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 280 (103.6 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 83/314 (26%), Positives = 145/314 (46%)
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 87
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 345
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 88 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 146
Query: 346 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 405
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 147 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 406 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ GH
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 465 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 521
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 522 ATGG--SDALVNLW 533
A+ +D + LW
Sbjct: 317 ASAALENDKTIKLW 330
Score = 191 (72.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ +D K L +WDV G C KGH V F+P ++ L+ SGS D +VR+WD+
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVK 159
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 188 (71.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 530 VNLWHDST 537
V +W T
Sbjct: 153 VRIWDVKT 160
Score = 171 (65.3 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 8 ADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
AD+ + +W DG F GHK +S + + +D +LL S SDD T+++WD+ + KC
Sbjct: 65 ADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIP 125
+ TL H + V + ++S D+ V +WD++ C T+P + + V AV
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 126 PGSAFDSFLSSYN 138
GS S SSY+
Sbjct: 182 DGSLIVS--SSYD 192
Score = 166 (63.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 65/302 (21%), Positives = 123/302 (40%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 43 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 141
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 142 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 195
K ++L H V + ++ + D C +S + +DD +
Sbjct: 161 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 196 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 253
P+ + +L T D L L+ K + + K G+ E + F +
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDY-----SKGKCL--KTYTGHKNEKYCIFANFSVTGGK 272
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
++ + V +++L + L GH+++V+ C + I D +++LW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWK 331
Query: 314 SE 315
S+
Sbjct: 332 SD 333
Score = 145 (56.1 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 67/307 (21%), Positives = 136/307 (44%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 97
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 186
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 98 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 149
Query: 187 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 234
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 293
+ N + +KF +Y+ AT ++++D S C GH C+ ++
Sbjct: 210 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 351
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 269 TGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 326
Query: 352 IKVWSFD 358
IK+W D
Sbjct: 327 IKLWKSD 333
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 280 (103.6 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 83/314 (26%), Positives = 145/314 (46%)
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 87
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 345
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 88 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 146
Query: 346 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 405
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 147 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 406 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ GH
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 465 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 521
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 522 ATGG--SDALVNLW 533
A+ +D + LW
Sbjct: 317 ASAALENDKTIKLW 330
Score = 191 (72.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ +D K L +WDV G C KGH V F+P ++ L+ SGS D +VR+WD+
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVK 159
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 188 (71.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 530 VNLWHDST 537
V +W T
Sbjct: 153 VRIWDVKT 160
Score = 171 (65.3 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 8 ADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
AD+ + +W DG F GHK +S + + +D +LL S SDD T+++WD+ + KC
Sbjct: 65 ADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIP 125
+ TL H + V + ++S D+ V +WD++ C T+P + + V AV
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 126 PGSAFDSFLSSYN 138
GS S SSY+
Sbjct: 182 DGSLIVS--SSYD 192
Score = 166 (63.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 65/302 (21%), Positives = 123/302 (40%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 43 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 141
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 142 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 195
K ++L H V + ++ + D C +S + +DD +
Sbjct: 161 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 196 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 253
P+ + +L T D L L+ K + + K G+ E + F +
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDY-----SKGKCL--KTYTGHKNEKYCIFANFSVTGGK 272
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
++ + V +++L + L GH+++V+ C + I D +++LW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWK 331
Query: 314 SE 315
S+
Sbjct: 332 SD 333
Score = 145 (56.1 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 67/307 (21%), Positives = 136/307 (44%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 97
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 186
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 98 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 149
Query: 187 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 234
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 293
+ N + +KF +Y+ AT ++++D S C GH C+ ++
Sbjct: 210 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 351
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 269 TGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 326
Query: 352 IKVWSFD 358
IK+W D
Sbjct: 327 IKLWKSD 333
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 280 (103.6 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 83/314 (26%), Positives = 145/314 (46%)
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 87
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 345
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 88 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 146
Query: 346 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 405
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 147 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 406 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ GH
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 465 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 521
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 522 ATGG--SDALVNLW 533
A+ +D + LW
Sbjct: 317 ASAALENDKTIKLW 330
Score = 191 (72.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ +D K L +WDV G C KGH V F+P ++ L+ SGS D +VR+WD+
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVK 159
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 188 (71.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 530 VNLWHDST 537
V +W T
Sbjct: 153 VRIWDVKT 160
Score = 171 (65.3 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 8 ADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
AD+ + +W DG F GHK +S + + +D +LL S SDD T+++WD+ + KC
Sbjct: 65 ADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIP 125
+ TL H + V + ++S D+ V +WD++ C T+P + + V AV
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 126 PGSAFDSFLSSYN 138
GS S SSY+
Sbjct: 182 DGSLIVS--SSYD 192
Score = 166 (63.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 65/302 (21%), Positives = 123/302 (40%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 43 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 141
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 142 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 195
K ++L H V + ++ + D C +S + +DD +
Sbjct: 161 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 196 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 253
P+ + +L T D L L+ K + + K G+ E + F +
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDY-----SKGKCL--KTYTGHKNEKYCIFANFSVTGGK 272
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
++ + V +++L + L GH+++V+ C + I D +++LW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWK 331
Query: 314 SE 315
S+
Sbjct: 332 SD 333
Score = 145 (56.1 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 67/307 (21%), Positives = 136/307 (44%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 97
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 186
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 98 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 149
Query: 187 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 234
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 293
+ N + +KF +Y+ AT ++++D S C GH C+ ++
Sbjct: 210 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 351
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 269 TGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 326
Query: 352 IKVWSFD 358
IK+W D
Sbjct: 327 IKLWKSD 333
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 304 (112.1 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 119/558 (21%), Positives = 225/558 (40%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL----- 61
G D V WD+D C GH+ V ++ + +K L+ +G+ D+ +R WD+
Sbjct: 168 GKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSE-EKRLI-TGASDSELRAWDISYLQE 225
Query: 62 -----------LAKKCVATLDKHFSR--VTSMAITSD--------GSTLISAGRDKVVNL 100
+ + D H + M T + +++ GRD+VVNL
Sbjct: 226 IEDPEEPEPKKIKESSPGIQDSHEAEDGTLEMDETPEDRILTCRKAGSIMREGRDRVVNL 285
Query: 101 WDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG 160
+ T ++E C + + + +KK ++ +++ E
Sbjct: 286 AVDKTGRILACHGTDSVLEVFCILSKEE-----IQKKMDKKMKKAKKKAKLNSCNEEEED 340
Query: 161 I---VRMWNADSACLYEQ-KSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL 216
+ V+M D K+S SF++ + +G A L N + L
Sbjct: 341 LEVNVKMTLQDEIQRVANIKTSAKIKSFDLIHTPQGELKAVFLLQNN----LVELYSLNA 396
Query: 217 YTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSY 276
T P + + + G+ ++ L F + L+ A + +++++ S++ C
Sbjct: 397 STPGPQPVRTNRITIG----GHRSDVRTLSFSSDNIAILSAAA--DSIKIWNRSTLQCIR 450
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
+A E LC G +V G+K ++L+D S + H GA+ +++ S
Sbjct: 451 TMA--CEYALC---SFFVPGDRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLS 505
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH-GKDINSLAVAPNDSLV 395
+ F V+G +D ++K W F+ + D+ L K +++ ++ +PN L+
Sbjct: 506 PDQRGF-VTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLL 564
Query: 396 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
D T ++ + L ++ GHK + ++ S ++ T S D+ +KIW + G
Sbjct: 565 AVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGD 624
Query: 456 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVG 515
C K+ H SV+ F+ + + G D +K W E I T + H +IW LAV
Sbjct: 625 CHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAVS 684
Query: 516 KKTEMFATGGSDALVNLW 533
+ + D + LW
Sbjct: 685 PSGDYVVSSSHDKSLRLW 702
Score = 194 (73.4 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 43/165 (26%), Positives = 79/165 (47%)
Query: 371 KAKAVVAAHG--KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 428
K + ++ G ++ L +P+ + G +D + ++ L VTF GHK I S+
Sbjct: 54 KGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSL 113
Query: 429 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 488
++ + + + S D I +W + + S L +GH ++ +A FL +V+ G D +V
Sbjct: 114 KYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMV 173
Query: 489 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
K W + T C T H ++W L + + + TG SD+ + W
Sbjct: 174 KWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAW 218
Score = 157 (60.3 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 38/153 (24%), Positives = 70/153 (45%)
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 475
+T GH+ + ++ FS + +++A+ D +IKIW+ S C++T L + F+
Sbjct: 409 ITIGGHRSDVRTLSFSSDNIAILSAAAD-SIKIWNRSTLQCIRTMA--CEYALCSFFVPG 465
Query: 476 GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHD 535
Q+V G ++L+ + +G + T D H+ +W+L++ F TGG+D V W
Sbjct: 466 DRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF 525
Query: 536 STXXXXXXXXXXXXXXVLRGQELENAVLDADYT 568
R +L+ VL Y+
Sbjct: 526 ELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYS 558
Score = 140 (54.3 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D ++VWDV + KGHK ++ LF +K+LL + D V+ WDL
Sbjct: 122 LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFL--REKNLLVTSGKDTMVKWWDLD 179
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+ C T+ H + V + + S+ LI+ D + WD+
Sbjct: 180 TQHCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAWDI 220
Score = 131 (51.2 bits), Expect = 7.6e-16, Sum P(2) = 7.6e-16
Identities = 45/143 (31%), Positives = 69/143 (48%)
Query: 237 GYNEEILDLKF--LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
G+ I LK+ LG LA + + V+D+ + S Y L GH + + T AL
Sbjct: 105 GHKAAITSLKYDQLGGR---LASGSKDTDIIVWDVINESGLYRLKGHKDAI----TQALF 157
Query: 295 -SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAV-GAVAFSKKLQNFLVSGSSDHTI 352
K L+VT KD V+ WD +++ C GH V G V S++ + L++G+SD +
Sbjct: 158 LREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKR--LITGASDSEL 215
Query: 353 KVWSFDGLSD--DAEQPMNLKAK 373
+ W L + D E+P K K
Sbjct: 216 RAWDISYLQEIEDPEEPEPKKIK 238
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
ADR V +W +D G C H V + F P + L F+ D ++ WD + +
Sbjct: 611 ADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSH--LFFTAGKDRKIKQWDADKFEHI 668
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
TL+ H + +A++ G ++S+ DK + LW+
Sbjct: 669 QTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 121 (47.7 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 28/104 (26%), Positives = 50/104 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++ + G F GHK ++S+ + D L SGS D + VWD++ + +
Sbjct: 86 DGSIRIFSLLSGEGNVTFNGHKAAITSLKY--DQLGGRLASGSKDTDIIVWDVINESGLY 143
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
L H +T + + L+++G+D +V WDL C T+
Sbjct: 144 RLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTM 187
Score = 98 (39.6 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 25/92 (27%), Positives = 45/92 (48%)
Query: 12 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 71
V +WD+ G +G K V+ + P D L G +D ++R++ LL+ + T +
Sbjct: 47 VFIWDLRKGEKILILQGLKHEVTCLC--PSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFN 104
Query: 72 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H + +TS+ G L S +D + +WD+
Sbjct: 105 GHKAAITSLKYDQLGGRLASGSKDTDIIVWDV 136
Score = 84 (34.6 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 19/81 (23%), Positives = 40/81 (49%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K L +++ ++ L+F+ + + + +++ +D L GH + + CL A
Sbjct: 627 KSLFAHDDSVMYLRFVPKSHLFFTAGKD-RKIKQWDADKFEHIQTLEGHHQEIWCL---A 682
Query: 293 LSSGKILIVTGSKDNSVRLWD 313
+S +V+ S D S+RLW+
Sbjct: 683 VSPSGDYVVSSSHDKSLRLWE 703
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 278 (102.9 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 58/178 (32%), Positives = 91/178 (51%)
Query: 356 SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 415
S + S A N K +A H K ++S+ +PN + + S D+ +W D
Sbjct: 21 SSNNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 80
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 475
T GHK GI V +S ++++AS DKT+KIW +S G CLKT +GH++ V +F +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 476 GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
IVS D V++W V+TG+C+ T H D + A+ + + + D L +W
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Score = 271 (100.5 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 82/314 (26%), Positives = 144/314 (45%)
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 32 KPNYTLKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 87
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 345
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 88 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 146
Query: 346 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 405
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 147 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 406 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ H
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHK 256
Query: 465 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 521
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENII 316
Query: 522 ATGG--SDALVNLW 533
A+ +D + LW
Sbjct: 317 ASAALENDKTIKLW 330
Score = 191 (72.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ +D K L +WDV G C KGH V F+P ++ L+ SGS D +VR+WD+
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVK 159
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 188 (71.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 33 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 530 VNLWHDST 537
V +W T
Sbjct: 153 VRIWDVKT 160
Score = 171 (65.3 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 8 ADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
AD+ + +W DG F GHK +S + + +D +LL S SDD T+++WD+ + KC
Sbjct: 65 ADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIP 125
+ TL H + V + ++S D+ V +WD++ C T+P + + V AV
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 126 PGSAFDSFLSSYN 138
GS S SSY+
Sbjct: 182 DGSLIVS--SSYD 192
Score = 163 (62.4 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 65/301 (21%), Positives = 123/301 (40%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 43 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 141
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 142 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 195
K ++L H V + ++ + D C +S + +DD +
Sbjct: 161 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 196 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEI-LDLKFLGEEEQY 254
P+ + +L T D L L+ + + K L NE+ + F ++
Sbjct: 220 VKFSPNGKYILAATLDNTLKLW---DYSKGKC---LKTYTCHKNEKYCIFANFSVTGGKW 273
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 314
+ + V +++L + L GH+++V+ C + I D +++LW S
Sbjct: 274 IVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKS 332
Query: 315 E 315
+
Sbjct: 333 D 333
Score = 136 (52.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 66/307 (21%), Positives = 135/307 (43%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 97
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 186
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 98 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 149
Query: 187 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 234
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 293
+ N + +KF +Y+ AT ++++D S C H C+ ++
Sbjct: 210 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSV 268
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 351
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 269 TGGK-WIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 326
Query: 352 IKVWSFD 358
IK+W D
Sbjct: 327 IKLWKSD 333
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 303 (111.7 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 123/555 (22%), Positives = 225/555 (40%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL----- 61
G D V WD+D C GH+ V ++ + +K L+ +G+ D+ +R WD+
Sbjct: 168 GKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSE-EKRLI-TGAADSELRAWDIDYLQE 225
Query: 62 ----------LAKKCVATLDKHFSRVTSMAITSDGST--LISAGRDKVVNLWDLRDYSCK 109
K+C D S +++ + S ++S + + + + RD
Sbjct: 226 IDDPEEPEPKKIKECPGIQDTPESEDSTLEADDEKSEDRILSCSKAGSI-MREGRDRVVN 284
Query: 110 LTVPTYEMVEAVCAIPPGSAFDSF--LSSYNQQT-----IKKKRRSLEIHFITVGE--RG 160
L V + A C S + F LS Q +KK R+ ++ E
Sbjct: 285 LAVDKTGRILA-CH-GTDSVLEVFCILSKAEVQKKMDKKLKKARKKARLNSANEEEDPET 342
Query: 161 IVRMWNADSACLYEQ-KSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTT 219
V M D + K+S SF++ S +G A L N + + + L
Sbjct: 343 SVSMTLQDEILRVAKIKTSAKIKSFDLIHSPQGELKAVFLLQNNLVELYSLNASL----P 398
Query: 220 VEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLA 279
P + + + G+ ++ L F + L+ A + +++++ S++ C +
Sbjct: 399 APQPVRTSRITIG----GHRSDVRTLSFSSDNIAVLSAAA--DSIKIWNRSTLQCIRTMP 452
Query: 280 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL 339
E LC G +V G+K +++L+D S + H GA+ +++ S
Sbjct: 453 --CEYALC---SFFVPGDRQVVIGTKTGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQ 507
Query: 340 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH-GKDINSLAVAPNDSLVCTG 398
+ F V+G +D +K W F+ ++D L K +D+ ++ +PN L+
Sbjct: 508 RGF-VTGGADKAVKFWDFELVTDKNSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVS 566
Query: 399 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
D T V+ + L ++ GHK + ++ S ++ T S D+ +KIW + G C +
Sbjct: 567 LLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDISHDGALIATGSADRNVKIWGLDFGDCHR 626
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 518
+ H SV+ F+ + + G D +K W E I T + H +IW LAV
Sbjct: 627 SLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSG 686
Query: 519 EMFATGGSDALVNLW 533
+ + D + LW
Sbjct: 687 DYVVSASHDKSLRLW 701
Score = 186 (70.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/159 (23%), Positives = 76/159 (47%)
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 434
++ + +++ L +P+ + G +D ++ L +TF GHK + S+++ +
Sbjct: 60 ILQGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQLG 119
Query: 435 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
+ + S D + IW + + S L +GH +V +A FL +V+ G D +VK W +
Sbjct: 120 GRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLD 179
Query: 495 TGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
C T H ++W L + + + TG +D+ + W
Sbjct: 180 NQHCFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAW 218
Score = 150 (57.9 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 39/159 (24%), Positives = 71/159 (44%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
P S +T GH+ + ++ FS + V++A+ D +IKIW+ S C++T L
Sbjct: 402 PVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTMP--CEYALC 458
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
+ F+ Q+V G ++L+ + +G + T H+ +W++++ F TGG+D
Sbjct: 459 SFFVPGDRQVVIGTKTGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKA 518
Query: 530 VNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYT 568
V W R +L+ VL Y+
Sbjct: 519 VKFWDFELVTDKNSTQKRLSVKQTRTLQLDEDVLCVSYS 557
Score = 144 (55.7 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 56/218 (25%), Positives = 97/218 (44%)
Query: 235 LVGYNE-EILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
L+G + I+ + GE+ +Y+AV E V ++DL +L G+ + V CL C
Sbjct: 18 LIGSQKGNIVFVTLRGEKGRYVAVPA-CEHVFIWDLRKGEKILILQGNKQEVTCL--CPS 74
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
G L V G +D ++R++ S GH AV ++ + + L L SGS D +
Sbjct: 75 PDGLHLAV-GYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQ-LGGRLASGSKDTDVI 132
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W D +++ + AV A L + + LV +G +D W L +
Sbjct: 133 IW--DVINESGLYRLKGHKDAVTQA-------LFLRERNLLVTSG-KDTMVKWWDLDNQH 182
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
T GH+ +W + ++ +IT + D ++ W I
Sbjct: 183 CFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWDI 220
Score = 141 (54.7 bits), Expect = 3.9e-16, Sum P(2) = 3.9e-16
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D V++WDV + KGHK V+ LF +++LL + D V+ WDL
Sbjct: 122 LASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFL--RERNLLVTSGKDTMVKWWDLD 179
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVP 113
+ C T+ H + V + + S+ LI+ D + WD+ DY ++ P
Sbjct: 180 NQHCFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWDI-DYLQEIDDP 229
Score = 135 (52.6 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 45/143 (31%), Positives = 70/143 (48%)
Query: 237 GYNEEILDLKF--LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
G+ + LK+ LG LA + V ++D+ + S Y L GH + V T AL
Sbjct: 105 GHKAAVTSLKYDQLGGR---LASGSKDTDVIIWDVINESGLYRLKGHKDAV----TQALF 157
Query: 295 -SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAV-GAVAFSKKLQNFLVSGSSDHTI 352
+ L+VT KD V+ WD +++ C GH V G V S++ + L++G++D +
Sbjct: 158 LRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKR--LITGAADSEL 215
Query: 353 KVWSFDGLS--DDAEQPMNLKAK 373
+ W D L DD E+P K K
Sbjct: 216 RAWDIDYLQEIDDPEEPEPKKIK 238
Score = 134 (52.2 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
ADR V +W +D G C H V + F P + L F+ D ++ WD + +
Sbjct: 610 ADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSH--LFFTAGKDHKIKQWDADKFEHI 667
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
TL+ H + +A++ G ++SA DK + LW+
Sbjct: 668 QTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE 702
Score = 124 (48.7 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
F GHK V+S+ + D L SGS D V +WD++ + + L H VT +
Sbjct: 103 FNGHKAAVTSLKY--DQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRE 160
Query: 86 GSTLISAGRDKVVNLWDLRDYSCKLTV 112
+ L+++G+D +V WDL + C T+
Sbjct: 161 RNLLVTSGKDTMVKWWDLDNQHCFKTM 187
Score = 103 (41.3 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 27/92 (29%), Positives = 45/92 (48%)
Query: 12 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 71
V +WD+ G +G+K V+ + P D L G +D +R++ LL+ + T +
Sbjct: 47 VFIWDLRKGEKILILQGNKQEVTCLC--PSPDGLHLAVGYEDGAIRIFSLLSGEGNITFN 104
Query: 72 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H + VTS+ G L S +D V +WD+
Sbjct: 105 GHKAAVTSLKYDQLGGRLASGSKDTDVIIWDV 136
Score = 81 (33.6 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L +++ ++ L+F+ + + + +++ +D L GH + + CL A
Sbjct: 626 RSLFAHDDSVMYLRFVPKSHLFFTAGKD-HKIKQWDADKFEHIQTLEGHHQEIWCL---A 681
Query: 293 LSSGKILIVTGSKDNSVRLWD 313
+S +V+ S D S+RLW+
Sbjct: 682 VSPSGDYVVSASHDKSLRLWE 702
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 250 (93.1 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 67/230 (29%), Positives = 110/230 (47%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
VL GH + V+ TC SG IV+GS DN++++W + + C+ GH G V + S
Sbjct: 989 VLKGHDDHVI---TCLQFSGN-RIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWS---S 1041
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
+ N ++SGS+D T+KVW D + + H + + + + S V
Sbjct: 1042 QMSGNIIISGSTDRTLKVWDMDSGA----------CVHTLQGHTSTVRCMHL--HGSKVV 1089
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
+GS+D T VW + + GH + V++ +++++ + D +KIW C
Sbjct: 1090 SGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPERQEC 1147
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 506
L T +GHT+ V F G +VS D +++W V TG C T H+
Sbjct: 1148 LHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQ 1195
Score = 215 (80.7 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 43/140 (30%), Positives = 74/140 (52%)
Query: 395 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 454
+ +GS D T VW + + T GH G+WS + S ++I+ S D+T+K+W + G
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSG 1065
Query: 455 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 514
+C+ T +GHTS+V R L G+++VS D +++W + G C+ H + +
Sbjct: 1066 ACVHTLQGHTSTV-RCMHL-HGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY 1123
Query: 515 GKKTEMFATGGSDALVNLWH 534
K + +G D +V +WH
Sbjct: 1124 DGK--LIVSGAYDYMVKIWH 1141
Score = 202 (76.2 bits), Expect = 3.8e-23, Sum P(2) = 3.8e-23
Identities = 57/198 (28%), Positives = 90/198 (45%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
+VSGS D T++VW D EQ L V+ H + V + L+ +G+ D
Sbjct: 1088 VVSGSRDATLRVW-------DIEQGSCLH---VLVGHLAAVR--CVQYDGKLIVSGAYDY 1135
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
+W + T +GH ++S++F + V++ S D +I++W + G+C T G
Sbjct: 1136 MVKIWHPERQECLHTLQGHTNRVYSLQFDGLH--VVSGSLDTSIRVWDVETGNCKHTLMG 1193
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY---DKHEDKIWALAVGKKTE 519
H S L + R +VS AD VK+W + TG+C+ T +KH + L +
Sbjct: 1194 HQS--LTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSR-- 1249
Query: 520 MFATGGSDALVNLWHDST 537
T D V LW T
Sbjct: 1250 FVVTSSDDGTVKLWDVKT 1267
Score = 199 (75.1 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 71/238 (29%), Positives = 108/238 (45%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D+ S +C + L GH+ V C+ L K+ V+GS+D ++R+WD E C+ V
Sbjct: 1057 LKVWDMDSGACVHTLQGHTSTVRCMH---LHGSKV--VSGSRDATLRVWDIEQGSCLHVL 1111
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
GH+ AV V + KL +VSG+ D+ +K+W P + + H +
Sbjct: 1112 VGHLAAVRCVQYDGKL---IVSGAYDYMVKIW----------HPERQECLHTLQGHTNRV 1158
Query: 384 NSLAVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 442
SL D L V +GS D + VW + T GH+ +E V A
Sbjct: 1159 YSLQF---DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNADS 1215
Query: 443 D-KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
K I + L H S+V F +R +V+ DG VKLW V+TG+ I
Sbjct: 1216 TVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRF--VVTSSDDGTVKLWDVKTGDFI 1271
Score = 165 (63.1 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 37/110 (33%), Positives = 55/110 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ DR + VWD+D G C H +GH V + H S + SGS DAT+RVWD+
Sbjct: 1048 IISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHG----SKVVSGSRDATLRVWDIE 1103
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
C+ L H + V + DG ++S D +V +W C T+
Sbjct: 1104 QGSCLHVLVGHLAAVR--CVQYDGKLIVSGAYDYMVKIWHPERQECLHTL 1151
Score = 163 (62.4 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 34/99 (34%), Positives = 57/99 (57%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWDV+ G C H GH+ + S + + +++L SG+ D+TV+VWD+ +C+
Sbjct: 1174 DTSIRVWDVETGNCKHTLMGHQSLTSGM----ELRQNILVSGNADSTVKVWDITTGQCLQ 1229
Query: 69 TL---DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
TL +KH S VT + S ++++ D V LWD++
Sbjct: 1230 TLSGPNKHHSAVTCLQFNS--RFVVTSSDDGTVKLWDVK 1266
Score = 158 (60.7 bits), Expect = 3.8e-23, Sum P(2) = 3.8e-23
Identities = 37/106 (34%), Positives = 53/106 (50%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+D L VW G C GH G V S +++ SGS D T++VWD+
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWS----SQMSGNIIISGSTDRTLKVWDMD 1063
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+ CV TL H S V M + GS ++S RD + +WD+ SC
Sbjct: 1064 SGACVHTLQGHTSTVRCMHL--HGSKVVSGSRDATLRVWDIEQGSC 1107
Score = 157 (60.3 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 33/104 (31%), Positives = 54/104 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWD++ G C H GH V + + D L+ SG+ D V++W ++C+
Sbjct: 1094 DATLRVWDIEQGSCLHVLVGHLAAVRCVQY----DGKLIVSGAYDYMVKIWHPERQECLH 1149
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
TL H +RV S+ DG ++S D + +WD+ +CK T+
Sbjct: 1150 TLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTL 1191
Score = 147 (56.8 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 46/171 (26%), Positives = 79/171 (46%)
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
C GK LIV+G+ D V++W E + C+ GH V ++ F +VSGS D
Sbjct: 1120 CVQYDGK-LIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGL---HVVSGSLDT 1175
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
+I+VW D E K + H + + + N ++ +G+ D T VW +
Sbjct: 1176 SIRVW-------DVETG---NCKHTLMGHQSLTSGMELRQN--ILVSGNADSTVKVWDIT 1223
Query: 411 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
+ T G H + ++F+ + V+T+S D T+K+W + G ++
Sbjct: 1224 TGQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKLWDVKTGDFIR 1272
Score = 135 (52.6 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ GA D V +W + C H +GH V S+ F D + SGS D ++RVWD+
Sbjct: 1128 IVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF----DGLHVVSGSLDTSIRVWDVE 1183
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
C TL H S + M + + L+S D V +WD+ C T+
Sbjct: 1184 TGNCKHTLMGHQSLTSGMELRQN--ILVSGNADSTVKVWDITTGQCLQTL 1231
Score = 114 (45.2 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 27 KGHKG-VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
KGH V++ + F + + SGSDD T++VW + KC+ TL H V S ++
Sbjct: 991 KGHDDHVITCLQFSGNR----IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMS-- 1044
Query: 86 GSTLISAGRDKVVNLWDLRDYSCKLTV 112
G+ +IS D+ + +WD+ +C T+
Sbjct: 1045 GNIIISGSTDRTLKVWDMDSGACVHTL 1071
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 231 (86.4 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 89/379 (23%), Positives = 166/379 (43%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 86
+GH + ++ F PD LL SGS+D T+++WD + TL+ H S V S+A + +G
Sbjct: 38 EGHSDWIETVTFSPDG--RLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 87 STLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGSAFDSFLSSYNQQTIKKK 145
L S D + LW+ S K T+ + + VE+V P G ++ + S
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHS 155
Query: 146 RRSLEIHFITVGERGIVRMWNADSAC-LYEQKSSDVTISFEMDDSKRGFTAATVLPSNQG 204
L + F G+ ++ +A+ L++ S+ + + P +
Sbjct: 156 DWVLSVAFSPDGQ--LLASGSAEKTIKLWD--SATCGLKHTLGGHSNWVLPLVFSPDGRL 211
Query: 205 LLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQV 264
L + D + L+ + P L L G++ +I L F Q LA ++ +
Sbjct: 212 LASGSNDATIKLW---DPPSGS----LKHTLEGHSNKIESLAF-SPNGQLLASGSSDATI 263
Query: 265 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 324
+++D ++ S + L GHS++VL + S L+ +GS DN+++LWD + +
Sbjct: 264 KLWDTATGSFRHTLKGHSDMVLSV---VFSPDSQLLESGSGDNTIKLWDPATGI-LKHSM 319
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW--SFDGLSDDAEQPMNLKAKAVVAAHGKD 382
G V ++ FS +L L++ +I+ W + S + ++++ VA G+
Sbjct: 320 RTPGIVRSIEFSIELPQ-LITNLGTFSIQAWHTGYPSRSSGKKTAVSVQRNRWVAIQGQ- 377
Query: 383 INSLAVAPNDSLVCTGSQD 401
L + P + + QD
Sbjct: 378 -KELWIPPEYQPISSAVQD 395
Score = 222 (83.2 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 45/165 (27%), Positives = 78/165 (47%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K + H + S+A +P+ L+ +GS ++T +W T GH + + FSP
Sbjct: 148 KHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSP 207
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+++ + S D TIK+W GS T EGH++ + +F G + S +D +KLW
Sbjct: 208 DGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWD 267
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
TG T H D + ++ +++ +G D + LW +T
Sbjct: 268 TATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPAT 312
Score = 219 (82.2 bits), Expect = 9.8e-23, Sum P(2) = 9.8e-23
Identities = 60/173 (34%), Positives = 86/173 (49%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH V +VAFS Q L SGS++ TIK+W D A + K + H +
Sbjct: 153 GHSDWVLSVAFSPDGQ-LLASGSAEKTIKLW------DSATCGL----KHTLGGHSNWVL 201
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
L +P+ L+ +GS D T +W P T GH I S+ FSP Q++ + S D
Sbjct: 202 PLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDA 261
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLWTVRTG 496
TIK+W + GS T +GH+ VL F + +Q++ G+ D +KLW TG
Sbjct: 262 TIKLWDTATGSFRHTLKGHSDMVLSVVF-SPDSQLLESGSGDNTIKLWDPATG 313
Score = 183 (69.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 64/220 (29%), Positives = 102/220 (46%)
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L + G+++ +L + F + Q LA + + ++++D ++ + L GHS VL L
Sbjct: 147 LKHTIEGHSDWVLSVAF-SPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPL-- 203
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
S L+ +GS D +++LWD S GH + ++AFS Q L SGSSD
Sbjct: 204 -VFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQ-LLASGSSDA 261
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
TIK+W D A K H + S+ +P+ L+ +GS D T +W P
Sbjct: 262 TIKLW------DTATGSFRHTLKG----HSDMVLSVVFSPDSQLLESGSGDNTIKLWD-P 310
Query: 411 DLVSVVTFRGHKRGIW-SVEFSPVDQVVITASGDKTIKIW 449
++ GI S+EFS +IT G +I+ W
Sbjct: 311 -ATGILKHSMRTPGIVRSIEFSIELPQLITNLGTFSIQAW 349
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 44/159 (27%), Positives = 72/159 (45%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 438
H I ++ +P+ L+ +GS D T +W T GH + SV FSP Q++
Sbjct: 40 HSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLA 99
Query: 439 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 498
+ S D TIK+W+ + S T EGH+ V +F G +LW G
Sbjct: 100 SGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG------------QLWNPAIGSL 147
Query: 499 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
T + H D + ++A ++ A+G ++ + LW +T
Sbjct: 148 KHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSAT 186
Score = 178 (67.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 47/161 (29%), Positives = 69/161 (42%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K + H + S+A +PN L+ +GS D T +W T GH + SV FSP
Sbjct: 76 KQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSP 135
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
Q +W+ + GS T EGH+ VL +F G + S A+ +KLW
Sbjct: 136 NGQ------------LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD 183
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T T H + + L + A+G +DA + LW
Sbjct: 184 SATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLW 224
Score = 178 (67.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 74/297 (24%), Positives = 123/297 (41%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPG 127
TL+ H + ++ + DG L S D + LWD K T+ + V++V P G
Sbjct: 36 TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 128 SAF-----DSFLSSYNQQTIKKKR----RSLEIHFITVGERGIVRMWNADSACLYEQKSS 178
D+ + +N + K S + + G ++WN L
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG--QLWNPAIGSLKH---- 149
Query: 179 DVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGY 238
TI D + P Q L +A++ + L+ + L L G+
Sbjct: 150 --TIEGHSD----WVLSVAFSPDGQLLASGSAEKTIKLWDSATCG-------LKHTLGGH 196
Query: 239 NEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI 298
+ +L L F + + LA +N ++++D S S + L GHS + ++ A S
Sbjct: 197 SNWVLPLVF-SPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKI---ESLAFSPNGQ 252
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
L+ +GS D +++LWD+ + GH V +V FS Q L SGS D+TIK+W
Sbjct: 253 LLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQ-LLESGSGDNTIKLW 308
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
T GH I +V FSP +++ + S D TIK+W + G +T EGH+SSV +F G
Sbjct: 36 TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 521
+ S +D +KLW + T + H D++ ++A +++
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLW 140
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 39/126 (30%), Positives = 64/126 (50%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
A++ + +WD H GH V ++F PD LL SGS+DAT+++WD +
Sbjct: 175 AEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDG--RLLASGSNDATIKLWDPPSGSLK 232
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPP 126
TL+ H +++ S+A + +G L S D + LWD S + T+ + +MV +V P
Sbjct: 233 HTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPD 292
Query: 127 GSAFDS 132
+S
Sbjct: 293 SQLLES 298
Score = 141 (54.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 37/120 (30%), Positives = 54/120 (45%)
Query: 14 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 73
+W+ G H +GH V S+ F PD LL SGS + T+++WD TL H
Sbjct: 139 LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQ--LLASGSAEKTIKLWDSATCGLKHTLGGH 196
Query: 74 FSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDS 132
+ V + + DG L S D + LWD S K T+ + +E++ P G S
Sbjct: 197 SNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLAS 256
Score = 120 (47.3 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D + +WD G +GH V S+ F P+ LL SGS D T+++W+
Sbjct: 56 LASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQ--LLASGSSDTTIKLWNSA 113
Query: 63 AKKCVATLDKHFSRVTSMAITSDG 86
+ T++ H RV S+A + +G
Sbjct: 114 SDSLKHTMEGHSDRVESVAFSPNG 137
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 237 (88.5 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 78/266 (29%), Positives = 117/266 (43%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
+ ++D ++ +L GHS C T A SS +VTGS D +VRLW++ +
Sbjct: 756 IMLFDTATGDLQKILKGHSHE--C-STMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTF 812
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
GH G V +VA S + +VSGS + +K+W D + D LK A A
Sbjct: 813 VGHTGTVLSVAISSDGRQ-IVSGSIE-AVKLW--DAATGDL-----LKTLASGFA----- 858
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
S+A +P+ + G +D +W + T H I S+ FSP + ++T S D
Sbjct: 859 GSVAFSPDSRQIAAGFKDGKIFIWDAAGTLQK-TLERHPGAIMSIAFSPDVKQLVTCSTD 917
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
TIK W I+ G + GH+ V G I S AD +KLW TG+ T
Sbjct: 918 STIKRWDITIGGVQEAV-GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLT 976
Query: 504 KHEDKIWALAVGKKTEMFATGGSDAL 529
H D + + + S+A+
Sbjct: 977 GHLDTVEKVVFSLDNRQIVSCSSEAV 1002
Score = 233 (87.1 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 72/246 (29%), Positives = 119/246 (48%)
Query: 292 ALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHT 351
A+SS IV+GS + +V+LWD+ + + T G G+VAFS + + +G D
Sbjct: 823 AISSDGRQIVSGSIE-AVKLWDAATGDLLK--TLASGFAGSVAFSPDSRQ-IAAGFKDGK 878
Query: 352 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD 411
I +W DA + + + H I S+A +P+ + T S D T W +
Sbjct: 879 IFIW-------DAAGTL----QKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDIT- 926
Query: 412 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRAS 471
+ V GH + + ++ SP +V+ + S DKTIK+W + G KT GH +V +
Sbjct: 927 IGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVV 986
Query: 472 FLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 531
F QIVSC ++ VK+W TG+ +++ +D +AV + A+G + +
Sbjct: 987 FSLDNRQIVSCSSEA-VKIWDAATGKVQNSFES-DDVFTIVAVSPDGKHIASGHCNGRIK 1044
Query: 532 LWHDST 537
LW +T
Sbjct: 1045 LWDMAT 1050
Score = 203 (76.5 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 76/296 (25%), Positives = 133/296 (44%)
Query: 243 LDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-----DTCALSSGK 297
L+ F+G L+VA + + Q+ S + A +++ L + A S
Sbjct: 808 LEKTFVGHTGTVLSVAISSDGRQIVSGSIEAVKLWDAATGDLLKTLASGFAGSVAFSPDS 867
Query: 298 ILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 357
I G KD + +WD+ + H GA+ ++AFS ++ LV+ S+D TIK W
Sbjct: 868 RQIAAGFKDGKIFIWDAAGTLQKTLER-HPGAIMSIAFSPDVKQ-LVTCSTDSTIKRWD- 924
Query: 358 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP--DLVSV 415
++ Q +AV H K + ++ ++P+ ++ +GS D+T +W DL
Sbjct: 925 --ITIGGVQ------EAV--GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKT 974
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 475
+T GH + V FS ++ +++ S + +KIW + G +FE + A
Sbjct: 975 LT--GHLDTVEKVVFSLDNRQIVSCSSE-AVKIWDAATGKVQNSFESDDVFTIVA-VSPD 1030
Query: 476 GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 531
G I S +G +KLW + TG + T + K +L TE+F +A+ N
Sbjct: 1031 GKHIASGHCNGRIKLWDMATGSLLKTMAGYRSKFDSLVT---TEVFDIQLQEAIFN 1083
Score = 174 (66.3 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 72/290 (24%), Positives = 132/290 (45%)
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L K L + I+ + F + +Q + +T+ ++ +D++ + GHS+ V T
Sbjct: 888 LQKTLERHPGAIMSIAFSPDVKQLVTCSTD-STIKRWDITIGGVQEAV-GHSKHVT---T 942
Query: 291 CALS-SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
LS GK+ I +GS D +++LWD+ + TGH+ V V FS L N + S
Sbjct: 943 MVLSPDGKV-IASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFS--LDNRQIVSCSS 999
Query: 350 HTIKVW-SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACV 406
+K+W + G ++ + ++ V+ GK I S L + TGS +T
Sbjct: 1000 EAVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAG 1059
Query: 407 WR--LPDLVSVVTFRGH-KRGIWSVE-----FSPVDQVVITASGDKTIKIWSISDGSCLK 458
+R LV+ F + I++ + FSP +++++ S D+ IK+W + G K
Sbjct: 1060 YRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQK 1119
Query: 459 TFEGHTSSVL-----RAS----------FLTRGAQIVSCGADGLVKLWTV 493
H+ S++ R+S F + G I + AD +++W++
Sbjct: 1120 RLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVWSI 1169
Score = 163 (62.4 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 73/322 (22%), Positives = 133/322 (41%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAG-HSEIVLCLD---- 289
L G++E + + F + +Q +A ++ ++++D ++ S L+G H + +
Sbjct: 616 LTGHSEAVWRVAFSPDGKQ-IASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQV 674
Query: 290 -TCALSSGKILIVTGSKDNSVRLWDS------ESRCCVGVGTGH--------MGAVG--A 332
A LI++G D SV LWD+ E G+ + G G A
Sbjct: 675 KAMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKVNYTYLQPPEQGGYGLHA 734
Query: 333 VAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND 392
AFS + G S + + FD + D ++ ++ H + +++A + +
Sbjct: 735 GAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQK--------ILKGHSHECSTMAFSSDS 786
Query: 393 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
+ TGS D T +W TF GH + SV S + +++ S + +K+W +
Sbjct: 787 RQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIE-AVKLWDAA 845
Query: 453 DGSCLKTF-EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWA 511
G LKT G SV +F QI + DG + +W G T ++H I +
Sbjct: 846 TGDLLKTLASGFAGSV---AFSPDSRQIAAGFKDGKIFIWDA-AGTLQKTLERHPGAIMS 901
Query: 512 LAVGKKTEMFATGGSDALVNLW 533
+A + T +D+ + W
Sbjct: 902 IAFSPDVKQLVTCSTDSTIKRW 923
Score = 143 (55.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 34/114 (29%), Positives = 54/114 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D K+ +WD G + H G + SI F PD + L + S D+T++ WD+
Sbjct: 876 DGKIFIWDA-AGTLQKTLERHPGAIMSIAFSPDVKQ--LVTCSTDSTIKRWDITIGGVQE 932
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAV 121
+ H VT+M ++ DG + S DK + LWD + T+ + + VE V
Sbjct: 933 AVG-HSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKV 985
Score = 125 (49.1 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 12 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 71
++++D G KGH S++ F D+ + L +GS D TVR+W+ T
Sbjct: 756 IMLFDTATGDLQKILKGHSHECSTMAFSSDSRQ--LVTGSVDCTVRLWNTTTGDLEKTFV 813
Query: 72 KHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
H V S+AI+SDG ++S G + V LWD
Sbjct: 814 GHTGTVLSVAISSDGRQIVS-GSIEAVKLWD 843
Score = 107 (42.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 441 SGDKT-IKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
S D T I ++ + G K +GH+ +F + Q+V+ D V+LW TG+
Sbjct: 750 SRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLE 809
Query: 500 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
T+ H + ++A+ +G +A V LW +T
Sbjct: 810 KTFVGHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAAT 846
Score = 98 (39.6 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+ D V +W+ G F GH G V S+ +D + SGS +A V++WD
Sbjct: 789 LVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAI--SSDGRQIVSGSIEA-VKLWDAA 845
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDKVVNLWD 102
+ TL F+ S+A + D S I+AG +D + +WD
Sbjct: 846 TGDLLKTLASGFAG--SVAFSPD-SRQIAAGFKDGKIFIWD 883
Score = 85 (35.0 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 27/84 (32%), Positives = 35/84 (41%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD-KHFSR--------VT 78
GH V + F PD + + SGSD +++WD TL H R V
Sbjct: 618 GHSEAVWRVAFSPDGKQ--IASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQVK 675
Query: 79 SMAITSDGSTLISAGRDKVVNLWD 102
+MA D +IS D V LWD
Sbjct: 676 AMAFLPDSKLIISGYYDGSVMLWD 699
Score = 80 (33.2 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 55/227 (24%), Positives = 95/227 (41%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+VT S D++++ WD V GH V + S + SGS+D TIK+W D
Sbjct: 911 LVTCSTDSTIKRWDITIGG-VQEAVGHSKHVTTMVLSPD-GKVIASGSADKTIKLW--DA 966
Query: 360 LSDDAEQPM--NLKA--KAVVAAHGKDI---NSLAVAPNDSLVCTG-------SQDRTAC 405
+ D ++ + +L K V + + I +S AV D+ TG S D
Sbjct: 967 ATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSEAVKIWDA--ATGKVQNSFESDDVFTI 1024
Query: 406 VWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI--SDGSCLKTFEGH 463
V PD + + GH G + ++ T +G ++ K S+ ++ ++ E
Sbjct: 1025 VAVSPDGKHIAS--GHCNGRIKLWDMATGSLLKTMAGYRS-KFDSLVTTEVFDIQLQEAI 1081
Query: 464 TSSVLRASFLTRGAQIV-SCGADGLVKLWTVRTGECIATYDKHEDKI 509
++ + + A+++ S D +KLW TG+ H D I
Sbjct: 1082 FNTQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSI 1128
Score = 67 (28.6 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 38 FHPDTDKSLLFSGSDDAT-VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK 96
F D + F S D+T + ++D L H ++MA +SD L++ D
Sbjct: 737 FSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDC 796
Query: 97 VVNLWD 102
V LW+
Sbjct: 797 TVRLWN 802
Score = 66 (28.3 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 299 LIVTGSKDNSVRLWDS-----ESR--C--------CVGVGTGHMGAVGAVAFSKKLQNFL 343
LI++ S D +++LWD+ + R C +G+ + +VAFS Q+ +
Sbjct: 1097 LILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQH-I 1155
Query: 344 VSGSSDHTIKVWSFD 358
+ S+D TI+VWS +
Sbjct: 1156 AAASADKTIRVWSIE 1170
Score = 60 (26.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 21/102 (20%), Positives = 45/102 (44%)
Query: 330 VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA-AHGKD------ 382
+ + FS + ++S S+D IK+W D + D ++ + + +++ A +
Sbjct: 1086 ITGLVFSPDAK-LILSTSTDRAIKLW--DAATGDLQKRLPCHSDSIITDAFSRSSGYPNW 1142
Query: 383 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRG 424
I S+A + + + S D+T VW + + + G G
Sbjct: 1143 IFSVAFSSDGQHIAAASADKTIRVWSIEKSLKASKYLGRAVG 1184
Score = 59 (25.8 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 34 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC-------VATLDKHFSRVTSMAITSDG 86
S+I+F P+ S + G + V VW A + TL H V +A + DG
Sbjct: 576 SAIIFSPE---SSVVKGENLHKVPVWLGRAPPMEDSWTPMIQTLTGHSEAVWRVAFSPDG 632
Query: 87 STLISAGRDKVVNLWDLRDYSCKLTV 112
+ S ++ LWD S + T+
Sbjct: 633 KQIASGSDSGLIKLWDTTTGSLQKTL 658
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 228 (85.3 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 67/274 (24%), Positives = 121/274 (44%)
Query: 265 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 324
+++ +++ +VL+GH V C+ A +G ++ T S D +V++WD+ +
Sbjct: 269 RIWTVNTGRTEHVLSGHKGSVSCVRWGA-GNGTGVVYTASHDKTVKVWDAVKGTLLHDLK 327
Query: 325 GHMGAVGAVAFSKKLQNFLV-SGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
H V +A S +F+ +G DHT V +++ + + GK +
Sbjct: 328 SHAHWVNHLALST---DFVCRTGFFDHTKTV---PATAEEKTAKAKERYEKAARVGGKIV 381
Query: 384 NSLAVAPNDSLVCTGS--QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 441
L A +D + D T + R+ GH++ + V FSP ++ +A
Sbjct: 382 ERLVSASDDFTMYLFDPLNDGTKPIARMI---------GHQKQVNHVTFSPDGSMIASAG 432
Query: 442 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
D K+W+ DG + T GH + V + SF +V+ D +K+W VRTG+
Sbjct: 433 WDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATD 492
Query: 502 YDKHEDKIWALAVGKKTEMFATGGSDALVNLWHD 535
HED+++ + + +GG D V LW +
Sbjct: 493 LPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLWRN 526
Score = 184 (69.8 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 62/225 (27%), Positives = 104/225 (46%)
Query: 249 GEEEQYLAVATNIEQVQ-VYDLSSMS-CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKD 306
G E+ + T + Q V+ + ++S ++ + GH E +LC SS ++ TGS D
Sbjct: 117 GIEDAFETTLTLAAEPQAVFKVQAVSRLAHRIPGHGEPILCAQFSPASSARL--ATGSGD 174
Query: 307 NSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQ 366
N+ R+WD+E+ GH G V V++S L + S D T+++W D E
Sbjct: 175 NTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTR-LATCSMDKTVRIW-------DPET 226
Query: 367 PMNLKAKAVVAAHGKDINSLAVAP----NDSL--VCTGSQDRTACVWRLPDLVSVVTFRG 420
+ ++ + H K + +A P D + + S+D TA +W + + G
Sbjct: 227 GKQVGSE--LKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSG 284
Query: 421 HKRGIWSVEFSPVDQ--VVITASGDKTIKIWSISDGSCLKTFEGH 463
HK + V + + VV TAS DKT+K+W G+ L + H
Sbjct: 285 HKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSH 329
Score = 178 (67.7 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 73/292 (25%), Positives = 127/292 (43%)
Query: 255 LAVATNIEQVQVYDLSS-MSCSYVLAGHSEIV--LCLDTCAL-SSGKILIVTGSKDNSVR 310
LA + + V+++D + L GH++ V + + L G +V+ SKD + R
Sbjct: 210 LATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTAR 269
Query: 311 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLV-SGSSDHTIKVWSFDGLSDDAEQPMN 369
+W + V +GH G+V V + +V + S D T+KVW DA +
Sbjct: 270 IWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVW-------DAVKGTL 322
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVC-TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 428
L + +H +N LA++ + VC TG D T V P T + +R +
Sbjct: 323 LHD---LKSHAHWVNHLALSTD--FVCRTGFFDHTKTV---PATAEEKTAKAKERYEKAA 374
Query: 429 EFS-PVDQVVITASGDKTIKIWS-ISDGSC-LKTFEGHTSSVLRASFLTRGAQIVSCGAD 485
+ + +++AS D T+ ++ ++DG+ + GH V +F G+ I S G D
Sbjct: 375 RVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWD 434
Query: 486 GLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
KLW R G+ I T H ++ + + + T D + +W+ T
Sbjct: 435 NATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRT 486
Score = 153 (58.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 46/168 (27%), Positives = 71/168 (42%)
Query: 376 VAAHGKDINSLAVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 434
+ HG+ I +P S + TGS D TA +W T +GH + V +SP
Sbjct: 148 IPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDG 207
Query: 435 QVVITASGDKTIKIWSISDGSCLKT-FEGHTSSVLRASF----LTRGA--QIVSCGADGL 487
+ T S DKT++IW G + + +GH V ++ L R ++VS D
Sbjct: 208 TRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFT 267
Query: 488 VKLWTVRTGECIATYDKHEDKIWAL--AVGKKTEMFATGGSDALVNLW 533
++WTV TG H+ + + G T + T D V +W
Sbjct: 268 ARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVW 315
Score = 143 (55.4 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 35/119 (29%), Positives = 53/119 (44%)
Query: 420 GHKRGIWSVEFSPVDQV-VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH I +FSP + T SGD T +IW G+ T +GH VL S+ G +
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTR 209
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ +C D V++W TG+ + + K K W + + G+ LV+ D T
Sbjct: 210 LATCSMDKTVRIWDPETGKQVGSELKGHAK-WVQGIAWEPLHLWRDGTPRLVSASKDFT 267
Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
Identities = 30/95 (31%), Positives = 42/95 (44%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D +W+ G + +GH V F D LL + S D T++VW++ K
Sbjct: 432 GWDNATKLWNARDGKFINTLRGHVAPVYQCSF--SADSRLLVTASKDTTLKVWNVRTGKL 489
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
L H V + + DG + S GRDK V LW
Sbjct: 490 ATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 114 (45.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 33/100 (33%), Positives = 47/100 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D +WD + G H KGH G V + + PD + L + S D TVR+WD K V
Sbjct: 174 DNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTR--LATCSMDKTVRIWDPETGKQVG 231
Query: 69 T-LDKHFSRVTSMA-----ITSDGST-LISAGRDKVVNLW 101
+ L H V +A + DG+ L+SA +D +W
Sbjct: 232 SELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIW 271
Score = 104 (41.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 25/79 (31%), Positives = 35/79 (44%)
Query: 24 HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAIT 83
H GH + F P + L +GS D T R+WD TL H V ++ +
Sbjct: 146 HRIPGHGEPILCAQFSP-ASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWS 204
Query: 84 SDGSTLISAGRDKVVNLWD 102
DG+ L + DK V +WD
Sbjct: 205 PDGTRLATCSMDKTVRIWD 223
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 307 (113.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 123/580 (21%), Positives = 234/580 (40%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + VWD++ C GH V S+ D ++ + +GS D +R + +
Sbjct: 169 DKFLRVWDLETQHCMQIVSGHHSEVWSV--DTDPEERYVVTGSADQELRFYAV------- 219
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV------- 121
K +S S+ S+ + + ++ N W++ ++ T + V V
Sbjct: 220 ---KEYSSNGSLVSDSNANEIKASEEHSTENKWEILKLFGEIQRQTKDRVARVRFNVSGK 276
Query: 122 ---CAIPPGSAFDSFL---SSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSAC-LYE 174
C + G + F + +Q K++ R E VG+ A + L +
Sbjct: 277 LLACQMA-GKTIEIFRVLDEAEAKQKAKRRLRRKEKKSSKVGDENSTANGEASAKIELAD 335
Query: 175 QKSSDVTIS-FEMDDSKRG------FTAATVLPSNQ-GLLCVTADQQLLLYTTVEVPEKK 226
SS + F++ R F+ P G L ++ + L + +++ E
Sbjct: 336 AVSSPTVLDVFKLLQVIRAGRKISSFSFCPTAPKESLGTLALSLNNNSLEFYSLKSSENA 395
Query: 227 MELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVL-AGHSEIV 285
+ + + G+ ++ + E+ L ++T+ +V++++ S+ SC + +G+
Sbjct: 396 KTVTIEHQ--GHRSDVRSVTL--SEDNTLLMSTSHSEVKIWNPSTGSCLRTIDSGYG--- 448
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 345
LC + + K IV G+K + + D S V H G + ++ F V+
Sbjct: 449 LC--SLIVPQNKYGIV-GTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGF-VT 504
Query: 346 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH-GKDINSLAVAPNDSLVCTGSQDRTA 404
S+DH +K W + + L V + D+ ++A++P+ + D T
Sbjct: 505 VSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTV 564
Query: 405 CVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
V+ + L ++ GHK + ++ S ++++T S DK +KIW + G C K+ H
Sbjct: 565 KVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHG 624
Query: 465 SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 524
SV+ F+ + S G D LVK W E + T + H +IW LA+ + + TG
Sbjct: 625 DSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTG 684
Query: 525 GSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLD 564
D + W S L E++NA D
Sbjct: 685 SHDRSMRRWDRSEEPFFLEEEKEKRLEELFESEIDNAADD 724
Score = 186 (70.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 54/202 (26%), Positives = 92/202 (45%)
Query: 257 VATNIEQVQVYDLSSMSCSYVLAGHSEI---VLCLDTCALSSGKILIVTGSKDNSVRLWD 313
+A +E+V ++ + CS L S L + + A SS L+ G D S+R+WD
Sbjct: 34 LAPALEKVGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIA-SSASSLVAVGYADGSIRIWD 92
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 373
+E C H GAV A+ ++K + + L SGS D+ I +W G S L+
Sbjct: 93 TEKGTCEVNFNSHKGAVTALRYNK-VGSMLASGSKDNDIILWDVVGESG----LFRLRG- 146
Query: 374 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 433
H + L + + S+D+ VW L + GH +WSV+ P
Sbjct: 147 -----HRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPE 201
Query: 434 DQVVITASGDKTIKIWSISDGS 455
++ V+T S D+ ++ +++ + S
Sbjct: 202 ERYVVTGSADQELRFYAVKEYS 223
Score = 169 (64.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 36/145 (24%), Positives = 65/145 (44%)
Query: 383 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 442
+ S+A + + SLV G D + +W V F HK + ++ ++ V ++ + S
Sbjct: 68 VTSIASSAS-SLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSK 126
Query: 443 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 502
D I +W + S L GH V FL G ++VS D +++W + T C+
Sbjct: 127 DNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIV 186
Query: 503 DKHEDKIWALAVGKKTEMFATGGSD 527
H ++W++ + TG +D
Sbjct: 187 SGHHSEVWSVDTDPEERYVVTGSAD 211
Score = 167 (63.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD + G C F HKG V+++ ++ S+L SGS D + +WD++ + +
Sbjct: 84 ADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVG--SMLASGSKDNDIILWDVVGESGL 141
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
L H +VT + G L+S+ +DK + +WDL C
Sbjct: 142 FRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHC 182
Score = 40 (19.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 9/44 (20%), Positives = 21/44 (47%)
Query: 600 IEKALHALGKEEIRQLLEYVREWNTKPKLCHVAQFVLFQLFNIH 643
+E+ L AL + + L Y+++W+ P+ + + + H
Sbjct: 811 LEQTLLALPFSDSLKFLCYMKDWSLIPEKVELVSRIATIILQTH 854
Score = 39 (18.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 697 EAREVKAESLVDSNVHQDANDVVITENVAKEQIESEGKTA 736
E +E + E L +S + A+D + E+I EG A
Sbjct: 704 EEKEKRLEELFESEIDNAADD----RHGPMEEIPEEGVAA 739
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 272 (100.8 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 79/303 (26%), Positives = 136/303 (44%)
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L + G+ + + + F +Q LA + + V+ + S +Y GH + V C++
Sbjct: 42 LERHFKGHRDAVTCVDFSFNMKQ-LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNF 100
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
SG +L +GS+D +VR+W + V H V +V F Q+F V+ S D
Sbjct: 101 SP--SGHLL-ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSF-VTASDDK 156
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
TIKVWS K ++ H + +P+ L+ + S D+T +W
Sbjct: 157 TIKVWSTH----------RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 206
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
V ++ H + V+F P V A D T+K+W + L+ ++ H+++V
Sbjct: 207 SRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 266
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 530
SF G +V+ +D +K+ + G + T H+ +A + E FA+GGSD V
Sbjct: 267 SFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 326
Query: 531 NLW 533
+W
Sbjct: 327 MVW 329
Score = 136 (52.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 34/108 (31%), Positives = 55/108 (50%)
Query: 4 LLEGA-DRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
L G+ D+ V +W ++ G + F+ H V S+ F D +S + + SDD T++VW
Sbjct: 107 LASGSRDKTVRIWVPNIKGE--STVFRAHTATVRSVHFCSD-GQSFV-TASDDKTIKVWS 162
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+K + +L +H + V + DG ++SA DK V LWD C
Sbjct: 163 THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 210
Score = 136 (52.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWDV +++ H V+++ FHP + L + S D+T+++ DL+ +
Sbjct: 237 GMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGN--YLVTASSDSTLKILDLMEGRL 294
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW----DLRDYSCKLTV 112
+ TL H T++A + G S G D+ V +W D+ DY L V
Sbjct: 295 LYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVIDYGEVLRV 344
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 34/102 (33%), Positives = 49/102 (48%)
Query: 1 MFALLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 59
M L G+ D ++VW + + F GHK V+ + F P LL SGS D TVR+W
Sbjct: 62 MKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH--LLASGSRDKTVRIW 119
Query: 60 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
K H + V S+ SDG + ++A DK + +W
Sbjct: 120 VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVW 161
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 30/98 (30%), Positives = 47/98 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + VW H V F PD L+ S SDD TV++WD +++CV
Sbjct: 155 DKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDG--RLIVSASDDKTVKLWDKTSRECVH 212
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
+ +H VT + G+ + +AG D V +WD+R +
Sbjct: 213 SYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTH 250
Score = 120 (47.3 bits), Expect = 0.00050, P = 0.00050
Identities = 72/305 (23%), Positives = 119/305 (39%)
Query: 25 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 84
+FKGH+ V+ + F + L SGS D+ + VW + + H VT + +
Sbjct: 45 HFKGHRDAVTCVDF--SFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 102
Query: 85 DGSTLISAGRDKVVNLW--DLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTI 142
G L S RDK V +W +++ S T V +V G SF+++ + +TI
Sbjct: 103 SGHLLASGSRDKTVRIWVPNIKGESTVFRAHT-ATVRSVHFCSDGQ---SFVTASDDKTI 158
Query: 143 KKKRRSLEIHFITVGER-GIVRM--WNADSACLYEQKSSDVTISFEMDDSKR-------- 191
K + ++ + VR ++ D L S D T+ D + R
Sbjct: 159 KVWSTHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKL-WDKTSRECVHSYCE 216
Query: 192 --GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLG 249
GF T + + CV A + TV+V + + +L + ++ + L F
Sbjct: 217 HGGFV--TYVDFHPSGTCVAAAG---MDNTVKVWDVRTHRLLQHYQL-HSAAVNALSF-H 269
Query: 250 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 309
YL A++ +++ DL Y L GH T A S +G D V
Sbjct: 270 PSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPAT---TVAFSRTGEYFASGGSDEQV 326
Query: 310 RLWDS 314
+W S
Sbjct: 327 MVWKS 331
>UNIPROTKB|Q9Y263 [details] [associations]
symbol:PLAA "Phospholipase A-2-activating protein"
species:9606 "Homo sapiens" [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0016005 "phospholipase A2 activator activity"
evidence=IEA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0006644 "phospholipid metabolic process"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50176 PROSITE:PS50294 SMART:SM00320 GO:GO:0007165
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0070062
eggNOG:COG2319 GO:GO:0006954 GO:GO:0006644 EMBL:AL356133
GO:GO:0016005 HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 EMBL:AK001642 EMBL:AK002143 EMBL:AL133608
EMBL:BC032551 EMBL:AF145020 EMBL:AK223544 EMBL:AJ238243
EMBL:AF083395 IPI:IPI00218465 PIR:T43447 RefSeq:NP_001026859.1
UniGene:Hs.27182 PDB:2K89 PDB:2K8A PDB:2K8B PDB:2K8C PDB:3EBB
PDBsum:2K89 PDBsum:2K8A PDBsum:2K8B PDBsum:2K8C PDBsum:3EBB
ProteinModelPortal:Q9Y263 SMR:Q9Y263 IntAct:Q9Y263 STRING:Q9Y263
PhosphoSite:Q9Y263 DMDM:108935868 PaxDb:Q9Y263 PRIDE:Q9Y263
DNASU:9373 Ensembl:ENST00000397292 GeneID:9373 KEGG:hsa:9373
UCSC:uc003zqd.3 CTD:9373 GeneCards:GC09M026903 HGNC:HGNC:9043
HPA:CAB005035 HPA:HPA020994 HPA:HPA020996 MIM:603873
neXtProt:NX_Q9Y263 PharmGKB:PA33370 HOVERGEN:HBG008204
InParanoid:Q9Y263 OMA:VSECCRF OrthoDB:EOG4DJJVW BindingDB:Q9Y263
ChEMBL:CHEMBL6114 ChiTaRS:PLAA EvolutionaryTrace:Q9Y263
GenomeRNAi:9373 NextBio:35110 ArrayExpress:Q9Y263 Bgee:Q9Y263
CleanEx:HS_PLAA Genevestigator:Q9Y263 GermOnline:ENSG00000137055
Uniprot:Q9Y263
Length = 795
Score = 296 (109.3 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 84/270 (31%), Positives = 131/270 (48%)
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVG--TGHM 327
+SCS L GH V L CA G + V S+D + RLW DS +R + +GH
Sbjct: 10 LSCS--LRGHELDVRGLVCCAYPPGAFVSV--SRDRTTRLWAPDSPNRSFTEMHCMSGHS 65
Query: 328 GAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
V V S + + +G +DH I ++S D PM L ++ H +
Sbjct: 66 NFVSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDS-------PMPLY---ILKGHKNTV 115
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S D
Sbjct: 116 CSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KT+K+W G C +TF GH V + L+ + +SC D ++ W + TGEC+ Y
Sbjct: 173 KTVKLWKA--GRCERTFSGHEDCVRGLAILSE-TEFLSCANDASIRRWQI-TGECLEVYY 228
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLW 533
H + I++++V F T D + +W
Sbjct: 229 GHTNYIYSISVFPNCRDFVTTAEDRSLRIW 258
Score = 136 (52.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 313
+A N + ++ L S Y+L GH V C+LSSGK +++GS D + ++W
Sbjct: 85 IATGGNDHNICIFSLDSPMPLYILKGHKNTV-----CSLSSGKFGTLLSGSWDTTAKVWL 139
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
++ C+ GH AV AV + Q +++GS+D T+K+W
Sbjct: 140 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTVKLW 178
Score = 135 (52.6 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 43/151 (28%), Positives = 72/151 (47%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVWDLLAKK 65
G D + ++ +D + KGHK V S+ + K L SGS D T +VW L K
Sbjct: 89 GNDHNICIFSLDSPMPLYILKGHKNTVCSL----SSGKFGTLLSGSWDTTAKVW--LNDK 142
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIP 125
C+ TL H + V ++ I + +++ DK V LW + C+ T +E + V +
Sbjct: 143 CMMTLQGHTAAVWAVKILPEQGLMLTGSADKTVKLW--KAGRCERTFSGHE--DCVRGLA 198
Query: 126 PGSAFDSFLSSYNQQTIKKKR---RSLEIHF 153
S + FLS N +I++ + LE+++
Sbjct: 199 ILSETE-FLSCANDASIRRWQITGECLEVYY 228
Score = 106 (42.4 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 42/155 (27%), Positives = 72/155 (46%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L++TGS D +V+LW + RC +GH V +A + + FL S ++D +I+ W
Sbjct: 165 LMLTGSADKTVKLWKA-GRC-ERTFSGHEDCVRGLAILSETE-FL-SCANDASIRRWQIT 220
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
G + V H I S++V PN T ++DR+ +W+ + T
Sbjct: 221 G-----------ECLEVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGECAQ--TI 267
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
R + IW +V+ AS D I++++ S+
Sbjct: 268 RLPAQSIWCCCVLDNGDIVVGAS-DGIIRVFTESE 301
Score = 88 (36.0 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 34/125 (27%), Positives = 54/125 (43%)
Query: 9 DRKVLVWDVDG---GFCT-HYFKGHKGVVSSILFHPDTD---KSLLFSGSDDATVRVWDL 61
DR +W D F H GH VS + P +D L+ +G +D + ++ L
Sbjct: 40 DRTTRLWAPDSPNRSFTEMHCMSGHSNFVSCVCIIPSSDIYPHGLIATGGNDHNICIFSL 99
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEA 120
+ + L H + V S++ G TL+S D +W L D C +T+ + V A
Sbjct: 100 DSPMPLYILKGHKNTVCSLSSGKFG-TLLSGSWDTTAKVW-LND-KCMMTLQGHTAAVWA 156
Query: 121 VCAIP 125
V +P
Sbjct: 157 VKILP 161
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 289 (106.8 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 92/319 (28%), Positives = 151/319 (47%)
Query: 225 KKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEI 284
+K EL+ S+ +G I ++F + + + QV+V++ ++S + GH++
Sbjct: 160 QKAELMGSQ--IGGERPIAIVRFSNNGNHFASGSWG-GQVKVWNSDNLSEVQLFRGHTDR 216
Query: 285 VLCLDTCAL------SSGKILIVTGSKDNSVRLWD-SESRCCVGVGTGHMGAVGAVAFSK 337
V LD L S ++ + TG+ DN+V LW S+S + + GH+ VG VAF
Sbjct: 217 VSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRL-EGHLARVGRVAFHP 275
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 397
++LVS S D T ++W D + L + H + I S+A P+ SLV +
Sbjct: 276 S-GDYLVSASFDTTWRLW-------DVHTGVELLMQE---GHSEGIFSIACQPDGSLVSS 324
Query: 398 GSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCL 457
G D +W L S++ H R I ++ +SP + T+S D T+KIW + S
Sbjct: 325 GGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLA 384
Query: 458 KTFEGHTSSVLRASFLTRGAQ--IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVG 515
T H+S V ++ G I + G DG VKLW I + HE+K+ ++V
Sbjct: 385 HTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKV--MSVD 442
Query: 516 KKTEMFATGGSDALVNLWH 534
+ F + G D + LW+
Sbjct: 443 GYGDRFISSGYDRTIKLWY 461
Score = 224 (83.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 63/235 (26%), Positives = 103/235 (43%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV K + L +E +G G + V FS +F SGS +KVW+ D
Sbjct: 148 IVLSGKSSIEHLQKAE---LMGSQIGGERPIAIVRFSNNGNHF-ASGSWGGQVKVWNSDN 203
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTF 418
LS+ Q V + A ++ L + TG+ D T C+W+ ++
Sbjct: 204 LSE--VQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRL 261
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH + V F P +++AS D T ++W + G L EGH+ + + G+
Sbjct: 262 EGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSL 321
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ S G D + ++W +R+G+ I D+H +I A+A AT +D V +W
Sbjct: 322 VSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIW 376
Score = 174 (66.3 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 41/115 (35%), Positives = 61/115 (53%)
Query: 14 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 73
+WDV G +GH + SI PD SL+ SG +DA R+WDL + K + LD+H
Sbjct: 291 LWDVHTGVELLMQEGHSEGIFSIACQPDG--SLVSSGGNDAIGRIWDLRSGKSIMVLDEH 348
Query: 74 FSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPG 127
++ +MA + +G L ++ D V +WDLR S T+P + +V V I G
Sbjct: 349 IRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESG 403
Score = 132 (51.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 32/97 (32%), Positives = 44/97 (45%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD V +W +GH V + FHP D L S S D T R+WD+ +
Sbjct: 243 ADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGD--YLVSASFDTTWRLWDVHTGVEL 300
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+ H + S+A DGS + S G D + +WDLR
Sbjct: 301 LMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLR 337
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 293 (108.2 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 83/305 (27%), Positives = 144/305 (47%)
Query: 245 LKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV---LCLDTCALS-SGKILI 300
+KF +YLA N + V+D+ + + L S L + T A S GK L
Sbjct: 319 VKF-SNNGKYLATGCN-QAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYL- 375
Query: 301 VTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 360
VTG++D ++LWD ++ V +GH + ++ FS F+VSGS D T ++W +
Sbjct: 376 VTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHN-GRFIVSGSGDRTARLWDVE-- 432
Query: 361 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG 420
+ + L+ + +G + ++A++PND + GS D+ VW + + V G
Sbjct: 433 --TGQCILKLEIE-----NG--VTAIAISPNDQFIAVGSLDQIIRVWSVSGTL-VERLEG 482
Query: 421 HKRGIWSVEFSPVDQVVITASGDKTIKIWSIS------------DGSCLKTFEGHTSSVL 468
HK ++S+ FSP ++++ S DKTIK+W + +G C T+ GHT VL
Sbjct: 483 HKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVL 542
Query: 469 RASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 528
+ +S D ++ W ++TG+ T H++ + ++ FA+G D
Sbjct: 543 SVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDL 602
Query: 529 LVNLW 533
+W
Sbjct: 603 RARIW 607
Score = 283 (104.7 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 75/253 (29%), Positives = 124/253 (49%)
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
+YL T Q++++DLS+ YV +GH + + LD +G+ IV+GS D + RLW
Sbjct: 373 KYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFS--HNGRF-IVSGSGDRTARLW 429
Query: 313 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 372
D E+ C+ + V A+A S Q F+ GS D I+VWS G E+
Sbjct: 430 DVETGQCI-LKLEIENGVTAIAISPNDQ-FIAVGSLDQIIRVWSVSGTL--VER------ 479
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL------------PDLVSVVTFRG 420
+ H + + S+A +P+ S++ +GS D+T VW L P+ + T+ G
Sbjct: 480 ---LEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTG 536
Query: 421 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 480
H + SV SP + ++ S D++++ W + G T +GH +SV+ F G Q
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFA 596
Query: 481 SCGADGLVKLWTV 493
S D ++W++
Sbjct: 597 SGSGDLRARIWSI 609
Score = 255 (94.8 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 85/282 (30%), Positives = 133/282 (47%)
Query: 181 TISFEMDDSKRGFTAATVL--PSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGY 238
T+ E D R T+ P + L+ T D+Q+ L+ ++ +K+ + S G+
Sbjct: 349 TLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLW---DLSTQKVRYVFS----GH 401
Query: 239 NEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI 298
++I L F +++ + +++D+ + C L EI + A+S
Sbjct: 402 EQDIYSLDF-SHNGRFIVSGSGDRTARLWDVETGQCILKL----EIENGVTAIAISPNDQ 456
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
I GS D +R+W S S V GH +V ++AFS + L+SGS D TIKVW
Sbjct: 457 FIAVGSLDQIIRVW-SVSGTLVERLEGHKESVYSIAFSPD-SSILLSGSLDKTIKVWELQ 514
Query: 359 -----GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
GLS A +P + KA H + S+AV+P+ +GS+DR+ W L
Sbjct: 515 ATRSVGLS--AIKPEGI-CKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQ 571
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
S +T +GHK + SV FSP + + SGD +IWSI S
Sbjct: 572 SYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSIDPAS 613
Score = 166 (63.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 48/144 (33%), Positives = 69/144 (47%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
F + D+ + VW V G +GHK V SI F PD+ S+L SGS D T++VW+L
Sbjct: 457 FIAVGSLDQIIRVWSVSGTLVER-LEGHKESVYSIAFSPDS--SILLSGSLDKTIKVWEL 513
Query: 62 LAKK------------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 109
A + C AT H V S+A++ D +S +D+ + WDL+
Sbjct: 514 QATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSY 573
Query: 110 LTVPTYE-MVEAVCAIPPGSAFDS 132
LT ++ V +VC P G F S
Sbjct: 574 LTCQGHKNSVISVCFSPDGRQFAS 597
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
F + DR +WDV+ G C + GV ++I P+ D+ + GS D +RVW +
Sbjct: 416 FIVSGSGDRTARLWDVETGQCILKLEIENGV-TAIAISPN-DQFIAV-GSLDQIIRVWSV 472
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+ V L+ H V S+A + D S L+S DK + +W+L+
Sbjct: 473 -SGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQ 514
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 270 (100.1 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 58/178 (32%), Positives = 95/178 (53%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW-SFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
GH AV AV FS + +L S S+D IK+W ++DG K + ++ H I
Sbjct: 70 GHTKAVSAVKFSPNGE-WLASSSADKLIKIWGAYDG-----------KFEKTISGHKLGI 117
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
+ +A + + L+ +GS D+T VW L S+ T +GH ++ F+P ++++ S D
Sbjct: 118 SDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 177
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
++++IW + G CLKT H+ V F G+ IVS DGL ++W +G+C+ T
Sbjct: 178 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 235
Score = 261 (96.9 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 52/165 (31%), Positives = 86/165 (52%)
Query: 369 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 428
N K +A H K ++++ +PN + + S D+ +W D T GHK GI V
Sbjct: 61 NYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 120
Query: 429 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 488
+S +++++ S DKT+K+W +S G LKT +GH++ V +F + IVS D V
Sbjct: 121 AWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 180
Query: 489 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
++W VRTG+C+ T H D + A+ + + + D L +W
Sbjct: 181 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 225
Score = 214 (80.4 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 68/266 (25%), Positives = 120/266 (45%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K + G+ I D+ + + + L ++ + ++V++LS+ L GHS V C C
Sbjct: 108 KTISGHKLGISDVAW-SSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFC---CN 163
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ LIV+GS D SVR+WD + C+ H V AV F++ + +VS S D
Sbjct: 164 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRD-GSLIVSSSYDGLC 222
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
++W D S K ++ ++ + +PN + + D T +W
Sbjct: 223 RIW--DTASGQC-------LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 273
Query: 413 VSVVTFRGHKRGIWSV--EFSPVD-QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL- 468
+ T+ GHK + + FS + +++ S D + IW++ ++ +GHT +VL
Sbjct: 274 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLC 333
Query: 469 RASFLTRGAQIVSCGA---DGLVKLW 491
A T I++ A D +KLW
Sbjct: 334 TACHPTEN--IIASAALENDKTIKLW 357
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/110 (34%), Positives = 59/110 (53%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+D K L VW++ G KGH V F+P ++ L+ SGS D +VR+WD+
Sbjct: 129 LVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVR 186
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 187 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 236
Score = 172 (65.6 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
P+ T GH + + +V+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 60 PNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 119
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
++ + +VS D +K+W + TG+ + T H + ++ ++ + +G D
Sbjct: 120 VAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 179
Query: 530 VNLW 533
V +W
Sbjct: 180 VRIW 183
Score = 167 (63.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 45/133 (33%), Positives = 67/133 (50%)
Query: 8 ADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
AD+ + +W DG F GHK +S + + +D LL SGSDD T++VW+L K
Sbjct: 92 ADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDSRLLVSGSDDKTLKVWELSTGKS 148
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIP 125
+ TL H + V + ++S D+ V +WD+R C T+P + + V AV
Sbjct: 149 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 208
Query: 126 PGSAFDSFLSSYN 138
GS S SSY+
Sbjct: 209 DGSLIVS--SSYD 219
Score = 158 (60.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 65/303 (21%), Positives = 121/303 (39%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH VS++ F P+ + L S S D +++W K T+ H ++ +A +SD
Sbjct: 70 GHTKAVSAVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSR 127
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 141
L+S DK + +W+L T+ + C P S +FD + ++ +T
Sbjct: 128 LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 187
Query: 142 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 195
K ++L H V + ++ + D C +S + +DD +
Sbjct: 188 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 246
Query: 196 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 253
P+ + +L T D L L+ K + + K G+ E + F +
Sbjct: 247 VKFSPNGKYILAATLDNTLKLWDY-----SKGKCL--KTYTGHKNEKYCIFANFSVTGGK 299
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
++ + V +++L S L GH++ VLC C + I D +++LW
Sbjct: 300 WIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCT-ACHPTENIIASAALENDKTIKLWK 358
Query: 314 SES 316
S++
Sbjct: 359 SDT 361
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 67/305 (21%), Positives = 129/305 (42%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V+++ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 124
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDD 188
+S + +T+K S T+ N C + +S+ + +S D+
Sbjct: 125 DSRLLVSGSDDKTLKVWELSTGKSLKTLKGHS-----NYVFCCNFNPQSN-LIVSGSFDE 178
Query: 189 SKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKRLV 236
S R + T LP++ + D L++ ++ + + + L +
Sbjct: 179 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 238
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCALSS 295
N + +KF +Y+ AT ++++D S C GH C+ +++
Sbjct: 239 DDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 297
Query: 296 GKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHTIK 353
GK IV+GS+DN V +W+ +S+ V GH V A +N + S + +D TIK
Sbjct: 298 GK-WIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTA-CHPTENIIASAALENDKTIK 355
Query: 354 VWSFD 358
+W D
Sbjct: 356 LWKSD 360
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 291 (107.5 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 85/311 (27%), Positives = 142/311 (45%)
Query: 238 YNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEI---VLCLDTCALS 294
+N + + F + +YLA N Q+YD+ + + SE + C
Sbjct: 280 HNSVVCCVNF-SNDGKYLATGCN-RSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSP 337
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
G L TG++D +V++WD ++ GH + ++ +S F+VSGS D K+
Sbjct: 338 DGNYL-ATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSD-GRFIVSGSGDKKAKI 395
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 414
W + + L + V +G + S+A++P+ LV GS D +W
Sbjct: 396 WDIE----KGKCAFTLGNEEVGPKNG--VTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYF 449
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----CLKTFEGHTSSVLR 469
+ + GH ++SV FSP + + + S DK++K+W +S GS C TF GH VL
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLS-GSRSRSRCRATFNGHKDFVLS 508
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE---MFATGGS 526
+F G+ ++S D V+ W R G H++ + ++A+ K +FATG
Sbjct: 509 VAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSG 568
Query: 527 DALVNLW-HDS 536
D LW +DS
Sbjct: 569 DFRSRLWKYDS 579
Score = 170 (64.9 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 44/130 (33%), Positives = 68/130 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK--- 65
D V +WD G+ ++GH V S+ F PD KSL SGS D ++++WDL +
Sbjct: 436 DNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPD-GKSLA-SGSLDKSLKLWDLSGSRSRS 493
Query: 66 -CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCA 123
C AT + H V S+A + DGS LIS +D+ V WD R+ + + + ++ V +V
Sbjct: 494 RCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVAL 553
Query: 124 IPPGSAFDSF 133
P ++ F
Sbjct: 554 SPKNNSHGVF 563
Score = 158 (60.7 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 45/153 (29%), Positives = 72/153 (47%)
Query: 4 LLEGADRKVLVWDVDGGFCTHYF--KGHKG---VVSSILFHPDTDKSLLFSGSDDATVRV 58
L G +R ++DVD G H F + K + S+ F PD + L +G++D TV+V
Sbjct: 296 LATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGN--YLATGAEDKTVKV 353
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM- 117
WD+ KK T H + S+ +SDG ++S DK +WD+ C T+ E+
Sbjct: 354 WDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVG 413
Query: 118 ----VEAVCAIPPG-----SAFDSFLSSYNQQT 141
V +V P G + D+ + ++ QT
Sbjct: 414 PKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQT 446
Score = 152 (58.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 36/117 (30%), Positives = 53/117 (45%)
Query: 425 IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA 484
I SV FSP + T + DKT+K+W I TF GH + + + G IVS
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 485 DGLVKLWTVRTGECIATYDKHE----DKIWALAVGKKTEMFATGGSDALVNLWHDST 537
D K+W + G+C T E + + ++A+ + A G D +V LW T
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQT 446
Score = 151 (58.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 44/136 (32%), Positives = 64/136 (47%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFK----GHKGVVSSILFHPDTDKSLLFSGSDDATVR 57
F + D+K +WD++ G C G K V+S+ PD L+ +GS D VR
Sbjct: 383 FIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDG--RLVAAGSLDNIVR 440
Query: 58 VWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL---RDYS-CKLTVP 113
+WD + + H V S+A + DG +L S DK + LWDL R S C+ T
Sbjct: 441 LWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFN 500
Query: 114 TY-EMVEAVCAIPPGS 128
+ + V +V P GS
Sbjct: 501 GHKDFVLSVAFSPDGS 516
Score = 71 (30.1 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 31/156 (19%), Positives = 63/156 (40%)
Query: 161 IVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTV 220
IVR+W+A + E+ + + + F+ P + L + D+ L L+
Sbjct: 438 IVRLWDAQTGYFLERYEGHLDSVYSV-----AFS-----PDGKSLASGSLDKSLKLW--- 484
Query: 221 EVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAG 280
++ + G+ + +L + F + +L + VQ +D + + +L G
Sbjct: 485 DLSGSRSRSRCRATFNGHKDFVLSVAF-SPDGSWLISGSKDRSVQFWDPRNGTTHMMLQG 543
Query: 281 HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES 316
H V+ + ++ + TGS D RLW +S
Sbjct: 544 HKNSVISVALSPKNNSHGVFATGSGDFRSRLWKYDS 579
Score = 37 (18.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 213 QLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSS 271
QL T++ +E +K + Y EEI LK E++ A ++ + +S
Sbjct: 43 QLAELNTIQQTLYDLERGQNKMKIHYEEEIRQLKRQLEQQNINASQRDLNSPSTFRSNS 101
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 219 (82.2 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 71/271 (26%), Positives = 113/271 (41%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAF 335
+L+GH V C C + + D + LW+ C GH GAV + +
Sbjct: 61 LLSGHEGEVYC---CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 117
Query: 336 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SL 394
+ + L S S+D T+ VW S+ E+ LK H +NS A L
Sbjct: 118 NTD-GSMLFSASTDKTVAVWD----SETGERVKRLKG------HTSFVNSCYPARRGPQL 166
Query: 395 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 454
VCTGS D T +W + ++ TF+ + + +V F+ +I+ D IK+W +
Sbjct: 167 VCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 455 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH--E 506
T GH SV S + G+ ++S D V++W VR C+ + + H E
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 507 DKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + A G +D V +W D+T
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRFVYVW-DTT 315
Score = 183 (69.5 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 51/140 (36%), Positives = 66/140 (47%)
Query: 7 GADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK 64
G DR +L+W+V G C +Y KGH G V + H +TD S+LFS S D TV VWD
Sbjct: 85 GFDRLILLWNVYGD-CDNYATLKGHSGAVMEL--HYNTDGSMLFSASTDKTVAVWDSETG 141
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWDLRDYSCKLTVPTYEMVEAVCA 123
+ V L H S V S G L+ G D V LWD+R K + T++ V A
Sbjct: 142 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK---KAAIQTFQNTYQVLA 198
Query: 124 IPPGSAFDSFLSSYNQQTIK 143
+ D +S IK
Sbjct: 199 VTFNDTSDQIISGGIDNDIK 218
Score = 183 (69.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 72/304 (23%), Positives = 128/304 (42%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCAL 293
L G+ E+ KF LA A + ++++ +Y L GHS V+ L
Sbjct: 62 LSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-- 118
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
+ G +L + S D +V +WDSE+ V GH V + +++ + +GS D T+K
Sbjct: 119 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPD 411
+W +++ KA + LAV ND+ + +G D VW L
Sbjct: 178 LW-------------DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 224
Query: 412 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS----CLKTFEGHT--- 464
T RGH + + S +++ + D T+++W + + C+K F+G+
Sbjct: 225 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 284
Query: 465 -SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 523
++LR S+ G++I + AD V +W + + H I +A + +
Sbjct: 285 EKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIIS 344
Query: 524 GGSD 527
SD
Sbjct: 345 ASSD 348
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/135 (28%), Positives = 62/135 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VWD + G KGH V+S + L+ +GSDD TV++WD+ K +
Sbjct: 130 DKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQ 188
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
T + +V ++ +IS G D + +WDLR KLT ++V + S
Sbjct: 189 TFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLRQN--KLTYTMRGHADSVTGLSLSS 245
Query: 129 AFDSFLSSYNQQTIK 143
LS+ T++
Sbjct: 246 EGSYLLSNAMDNTVR 260
Score = 151 (58.2 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 39/152 (25%), Positives = 73/152 (48%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
I++G DN +++WD GH +V ++ S + ++L+S + D+T++VW
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GSYLLSNAMDNTVRVWDVRP 266
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+ E+ + + + V K++ + +P+ S + GS DR VW +
Sbjct: 267 FAPK-ERCVKI-FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLP 324
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
GH I V F P + ++I+AS DK + + I
Sbjct: 325 GHAGSINEVAFHPDEPIIISASSDKRLYMGEI 356
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V +WD+ F+ V++ + F+ +D+ + SG D ++VWDL K
Sbjct: 173 DGTVKLWDIRKKAAIQTFQNTYQVLA-VTFNDTSDQ--IISGGIDNDIKVWDLRQNKLTY 229
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 109
T+ H VT ++++S+GS L+S D V +WD+R ++ K
Sbjct: 230 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 270
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 472
++ GH+ ++ +F P + +A D+ I +W++ G C T +GH+ +V+ +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 117
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK-TEMFATGGSDALVN 531
T G+ + S D V +W TGE + H + + ++ ++ TG D V
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 532 LW 533
LW
Sbjct: 178 LW 179
Score = 112 (44.5 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 29/77 (37%), Positives = 38/77 (49%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSD 85
GH+G V FHP+ S L S D + +W++ C ATL H V + +D
Sbjct: 64 GHEGEVYCCKFHPNG--STLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD 120
Query: 86 GSTLISAGRDKVVNLWD 102
GS L SA DK V +WD
Sbjct: 121 GSMLFSASTDKTVAVWD 137
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 220 (82.5 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 72/271 (26%), Positives = 113/271 (41%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAF 335
+L+GH V C C + + D + LW+ C GH GAV + +
Sbjct: 62 LLSGHEGEVYC---CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 336 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SL 394
+ + L S S+D T+ VW S+ E+ LK H +NS A L
Sbjct: 119 NTD-GSMLFSASTDKTVAVWD----SETGERVKRLKG------HTSFVNSCYPARRGPQL 167
Query: 395 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 454
VCTGS D T +W + +V TF+ + + +V F+ +I+ D IK+W +
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 455 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH--E 506
T GH SV S + G+ ++S D V++W VR C+ + + H E
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 507 DKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + A G +D V +W D+T
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVW-DTT 316
Score = 184 (69.8 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 52/140 (37%), Positives = 66/140 (47%)
Query: 7 GADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK 64
G DR +L+W+V G C +Y KGH G V + H +TD S+LFS S D TV VWD
Sbjct: 86 GFDRLILLWNVYGD-CDNYATLKGHSGAVMEL--HYNTDGSMLFSASTDKTVAVWDSETG 142
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWDLRDYSCKLTVPTYEMVEAVCA 123
+ V L H S V S G L+ G D V LWD+R K V T++ V A
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK---KAAVQTFQNTYQVLA 199
Query: 124 IPPGSAFDSFLSSYNQQTIK 143
+ D +S IK
Sbjct: 200 VTFNDTSDQIISGGIDNDIK 219
Score = 184 (69.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 73/304 (24%), Positives = 128/304 (42%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCAL 293
L G+ E+ KF LA A + ++++ +Y L GHS V+ L
Sbjct: 63 LSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-- 119
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
+ G +L + S D +V +WDSE+ V GH V + +++ + +GS D T+K
Sbjct: 120 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPD 411
+W +++ KA V LAV ND+ + +G D VW L
Sbjct: 179 LW-------------DIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 412 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS----CLKTFEGHT--- 464
T RGH + + S +++ + D T+++W + + C+K F+G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285
Query: 465 -SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 523
++LR S+ G++I + AD V +W + + H I +A + +
Sbjct: 286 EKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILS 345
Query: 524 GGSD 527
SD
Sbjct: 346 ASSD 349
Score = 154 (59.3 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 40/135 (29%), Positives = 62/135 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VWD + G KGH V+S + L+ +GSDD TV++WD+ K V
Sbjct: 131 DKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAVQ 189
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
T + +V ++ +IS G D + +WDLR KLT ++V + S
Sbjct: 190 TFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLRQN--KLTYTMRGHADSVTGLSLSS 246
Query: 129 AFDSFLSSYNQQTIK 143
LS+ T++
Sbjct: 247 EGSYLLSNAMDNTVR 261
Score = 149 (57.5 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 38/152 (25%), Positives = 73/152 (48%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
I++G DN +++WD GH +V ++ S + ++L+S + D+T++VW
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GSYLLSNAMDNTVRVWDVRP 267
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+ E+ + + + V K++ + +P+ S + GS DR VW +
Sbjct: 268 FAPK-ERCVKI-FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLP 325
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
GH I V F P + ++++AS DK + + I
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V +WD+ F+ V++ + F+ +D+ + SG D ++VWDL K
Sbjct: 174 DGTVKLWDIRKKAAVQTFQNTYQVLA-VTFNDTSDQ--IISGGIDNDIKVWDLRQNKLTY 230
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 109
T+ H VT ++++S+GS L+S D V +WD+R ++ K
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 271
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 472
++ GH+ ++ +F P + +A D+ I +W++ G C T +GH+ +V+ +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK-TEMFATGGSDALVN 531
T G+ + S D V +W TGE + H + + ++ ++ TG D V
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 532 LW 533
LW
Sbjct: 179 LW 180
Score = 112 (44.5 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 29/77 (37%), Positives = 38/77 (49%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSD 85
GH+G V FHP+ S L S D + +W++ C ATL H V + +D
Sbjct: 65 GHEGEVYCCKFHPNG--STLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD 121
Query: 86 GSTLISAGRDKVVNLWD 102
GS L SA DK V +WD
Sbjct: 122 GSMLFSASTDKTVAVWD 138
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 219 (82.2 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 71/271 (26%), Positives = 113/271 (41%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAF 335
+L+GH V C C + + D + LW+ C GH GAV + +
Sbjct: 62 LLSGHEGEVYC---CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 336 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SL 394
+ + L S S+D T+ VW S+ E+ LK H +NS A L
Sbjct: 119 NTD-GSMLFSASTDKTVAVWD----SETGERVKRLKG------HTSFVNSCYPARRGPQL 167
Query: 395 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 454
VCTGS D T +W + ++ TF+ + + +V F+ +I+ D IK+W +
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 455 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH--E 506
T GH SV S + G+ ++S D V++W VR C+ + + H E
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 507 DKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + A G +D V +W D+T
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVW-DTT 316
Score = 183 (69.5 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 51/140 (36%), Positives = 66/140 (47%)
Query: 7 GADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK 64
G DR +L+W+V G C +Y KGH G V + H +TD S+LFS S D TV VWD
Sbjct: 86 GFDRLILLWNVYGD-CDNYATLKGHSGAVMEL--HYNTDGSMLFSASTDKTVAVWDSETG 142
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWDLRDYSCKLTVPTYEMVEAVCA 123
+ V L H S V S G L+ G D V LWD+R K + T++ V A
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK---KAAIQTFQNTYQVLA 199
Query: 124 IPPGSAFDSFLSSYNQQTIK 143
+ D +S IK
Sbjct: 200 VTFNDTSDQIISGGIDNDIK 219
Score = 183 (69.5 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 72/304 (23%), Positives = 128/304 (42%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCAL 293
L G+ E+ KF LA A + ++++ +Y L GHS V+ L
Sbjct: 63 LSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-- 119
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
+ G +L + S D +V +WDSE+ V GH V + +++ + +GS D T+K
Sbjct: 120 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPD 411
+W +++ KA + LAV ND+ + +G D VW L
Sbjct: 179 LW-------------DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 412 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS----CLKTFEGHT--- 464
T RGH + + S +++ + D T+++W + + C+K F+G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285
Query: 465 -SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 523
++LR S+ G++I + AD V +W + + H I +A + +
Sbjct: 286 EKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILS 345
Query: 524 GGSD 527
SD
Sbjct: 346 ASSD 349
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/135 (28%), Positives = 62/135 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VWD + G KGH V+S + L+ +GSDD TV++WD+ K +
Sbjct: 131 DKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQ 189
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
T + +V ++ +IS G D + +WDLR KLT ++V + S
Sbjct: 190 TFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLRQN--KLTYTMRGHADSVTGLSLSS 246
Query: 129 AFDSFLSSYNQQTIK 143
LS+ T++
Sbjct: 247 EGSYLLSNAMDNTVR 261
Score = 149 (57.5 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 38/152 (25%), Positives = 73/152 (48%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
I++G DN +++WD GH +V ++ S + ++L+S + D+T++VW
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GSYLLSNAMDNTVRVWDVRP 267
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+ E+ + + + V K++ + +P+ S + GS DR VW +
Sbjct: 268 FAPK-ERCVKI-FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLP 325
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
GH I V F P + ++++AS DK + + I
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V +WD+ F+ V++ + F+ +D+ + SG D ++VWDL K
Sbjct: 174 DGTVKLWDIRKKAAIQTFQNTYQVLA-VTFNDTSDQ--IISGGIDNDIKVWDLRQNKLTY 230
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 109
T+ H VT ++++S+GS L+S D V +WD+R ++ K
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 271
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 472
++ GH+ ++ +F P + +A D+ I +W++ G C T +GH+ +V+ +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK-TEMFATGGSDALVN 531
T G+ + S D V +W TGE + H + + ++ ++ TG D V
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 532 LW 533
LW
Sbjct: 179 LW 180
Score = 112 (44.5 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 29/77 (37%), Positives = 38/77 (49%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSD 85
GH+G V FHP+ S L S D + +W++ C ATL H V + +D
Sbjct: 65 GHEGEVYCCKFHPNG--STLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD 121
Query: 86 GSTLISAGRDKVVNLWD 102
GS L SA DK V +WD
Sbjct: 122 GSMLFSASTDKTVAVWD 138
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 219 (82.2 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 71/271 (26%), Positives = 113/271 (41%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAF 335
+L+GH V C C + + D + LW+ C GH GAV + +
Sbjct: 62 LLSGHEGEVYC---CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 336 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SL 394
+ + L S S+D T+ VW S+ E+ LK H +NS A L
Sbjct: 119 NTD-GSMLFSASTDKTVAVWD----SETGERVKRLKG------HTSFVNSCYPARRGPQL 167
Query: 395 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 454
VCTGS D T +W + ++ TF+ + + +V F+ +I+ D IK+W +
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 455 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH--E 506
T GH SV S + G+ ++S D V++W VR C+ + + H E
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 507 DKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + A G +D V +W D+T
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVW-DTT 316
Score = 183 (69.5 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 51/140 (36%), Positives = 66/140 (47%)
Query: 7 GADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK 64
G DR +L+W+V G C +Y KGH G V + H +TD S+LFS S D TV VWD
Sbjct: 86 GFDRLILLWNVYGD-CDNYATLKGHSGAVMEL--HYNTDGSMLFSASTDKTVAVWDSETG 142
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWDLRDYSCKLTVPTYEMVEAVCA 123
+ V L H S V S G L+ G D V LWD+R K + T++ V A
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK---KAAIQTFQNTYQVLA 199
Query: 124 IPPGSAFDSFLSSYNQQTIK 143
+ D +S IK
Sbjct: 200 VTFNDTSDQIISGGIDNDIK 219
Score = 183 (69.5 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 72/304 (23%), Positives = 128/304 (42%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCAL 293
L G+ E+ KF LA A + ++++ +Y L GHS V+ L
Sbjct: 63 LSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-- 119
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
+ G +L + S D +V +WDSE+ V GH V + +++ + +GS D T+K
Sbjct: 120 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPD 411
+W +++ KA + LAV ND+ + +G D VW L
Sbjct: 179 LW-------------DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 412 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS----CLKTFEGHT--- 464
T RGH + + S +++ + D T+++W + + C+K F+G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285
Query: 465 -SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 523
++LR S+ G++I + AD V +W + + H I +A + +
Sbjct: 286 EKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILS 345
Query: 524 GGSD 527
SD
Sbjct: 346 ASSD 349
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/135 (28%), Positives = 62/135 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VWD + G KGH V+S + L+ +GSDD TV++WD+ K +
Sbjct: 131 DKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQ 189
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
T + +V ++ +IS G D + +WDLR KLT ++V + S
Sbjct: 190 TFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLRQN--KLTYTMRGHADSVTGLSLSS 246
Query: 129 AFDSFLSSYNQQTIK 143
LS+ T++
Sbjct: 247 EGSYLLSNAMDNTVR 261
Score = 149 (57.5 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 38/152 (25%), Positives = 73/152 (48%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
I++G DN +++WD GH +V ++ S + ++L+S + D+T++VW
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GSYLLSNAMDNTVRVWDVRP 267
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+ E+ + + + V K++ + +P+ S + GS DR VW +
Sbjct: 268 FAPK-ERCVKI-FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLP 325
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
GH I V F P + ++++AS DK + + I
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V +WD+ F+ V++ + F+ +D+ + SG D ++VWDL K
Sbjct: 174 DGTVKLWDIRKKAAIQTFQNTYQVLA-VTFNDTSDQ--IISGGIDNDIKVWDLRQNKLTY 230
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 109
T+ H VT ++++S+GS L+S D V +WD+R ++ K
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 271
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 472
++ GH+ ++ +F P + +A D+ I +W++ G C T +GH+ +V+ +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK-TEMFATGGSDALVN 531
T G+ + S D V +W TGE + H + + ++ ++ TG D V
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 532 LW 533
LW
Sbjct: 179 LW 180
Score = 112 (44.5 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 29/77 (37%), Positives = 38/77 (49%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSD 85
GH+G V FHP+ S L S D + +W++ C ATL H V + +D
Sbjct: 65 GHEGEVYCCKFHPNG--STLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD 121
Query: 86 GSTLISAGRDKVVNLWD 102
GS L SA DK V +WD
Sbjct: 122 GSMLFSASTDKTVAVWD 138
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 219 (82.2 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 71/271 (26%), Positives = 113/271 (41%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAF 335
+L+GH V C C + + D + LW+ C GH GAV + +
Sbjct: 62 LLSGHEGEVYC---CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 336 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SL 394
+ + L S S+D T+ VW S+ E+ LK H +NS A L
Sbjct: 119 NTD-GSMLFSASTDKTVAVWD----SETGERVKRLKG------HTSFVNSCYPARRGPQL 167
Query: 395 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 454
VCTGS D T +W + ++ TF+ + + +V F+ +I+ D IK+W +
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 455 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH--E 506
T GH SV S + G+ ++S D V++W VR C+ + + H E
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFE 286
Query: 507 DKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + A G +D V +W D+T
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVW-DTT 316
Score = 183 (69.5 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 51/140 (36%), Positives = 66/140 (47%)
Query: 7 GADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK 64
G DR +L+W+V G C +Y KGH G V + H +TD S+LFS S D TV VWD
Sbjct: 86 GFDRLILLWNVYGD-CDNYATLKGHSGAVMEL--HYNTDGSMLFSASTDKTVAVWDSETG 142
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWDLRDYSCKLTVPTYEMVEAVCA 123
+ V L H S V S G L+ G D V LWD+R K + T++ V A
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK---KAAIQTFQNTYQVLA 199
Query: 124 IPPGSAFDSFLSSYNQQTIK 143
+ D +S IK
Sbjct: 200 VTFNDTSDQIISGGIDNDIK 219
Score = 180 (68.4 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 71/304 (23%), Positives = 128/304 (42%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCAL 293
L G+ E+ KF LA A + ++++ +Y L GHS V+ L
Sbjct: 63 LSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-- 119
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
+ G +L + S D +V +WDSE+ V GH V + +++ + +GS D T+K
Sbjct: 120 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPD 411
+W +++ KA + LAV ND+ + +G D VW L
Sbjct: 179 LW-------------DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 412 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS----CLKTFEGHT--- 464
T RGH + + S +++ + D T+++W + + C++ F+G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNF 285
Query: 465 -SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 523
++LR S+ G++I + AD V +W + + H I +A + +
Sbjct: 286 EKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILS 345
Query: 524 GGSD 527
SD
Sbjct: 346 ASSD 349
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/135 (28%), Positives = 62/135 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VWD + G KGH V+S + L+ +GSDD TV++WD+ K +
Sbjct: 131 DKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQ 189
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
T + +V ++ +IS G D + +WDLR KLT ++V + S
Sbjct: 190 TFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLRQN--KLTYTMRGHADSVTGLSLSS 246
Query: 129 AFDSFLSSYNQQTIK 143
LS+ T++
Sbjct: 247 EGSYLLSNAMDNTVR 261
Score = 149 (57.5 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 38/152 (25%), Positives = 73/152 (48%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
I++G DN +++WD GH +V ++ S + ++L+S + D+T++VW
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GSYLLSNAMDNTVRVWDVRP 267
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+ E+ + + + V K++ + +P+ S + GS DR VW +
Sbjct: 268 FAPK-ERCVRI-FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLP 325
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
GH I V F P + ++++AS DK + + I
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V +WD+ F+ V++ + F+ +D+ + SG D ++VWDL K
Sbjct: 174 DGTVKLWDIRKKAAIQTFQNTYQVLA-VTFNDTSDQ--IISGGIDNDIKVWDLRQNKLTY 230
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 109
T+ H VT ++++S+GS L+S D V +WD+R ++ K
Sbjct: 231 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 271
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 472
++ GH+ ++ +F P + +A D+ I +W++ G C T +GH+ +V+ +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK-TEMFATGGSDALVN 531
T G+ + S D V +W TGE + H + + ++ ++ TG D V
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 532 LW 533
LW
Sbjct: 179 LW 180
Score = 112 (44.5 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 29/77 (37%), Positives = 38/77 (49%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSD 85
GH+G V FHP+ S L S D + +W++ C ATL H V + +D
Sbjct: 65 GHEGEVYCCKFHPNG--STLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD 121
Query: 86 GSTLISAGRDKVVNLWD 102
GS L SA DK V +WD
Sbjct: 122 GSMLFSASTDKTVAVWD 138
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 267 (99.0 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 70/254 (27%), Positives = 118/254 (46%)
Query: 280 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL 339
GH + V C+D +L++ + +GS D+++ +W + + TGH AV V FS
Sbjct: 17 GHRDAVTCVDF-SLNTKHL--ASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS- 72
Query: 340 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVV-AAHGKDINSLAVAPNDSLVCTG 398
+ L SGS D T+++W P N+K ++ V AH + S+ + L+ T
Sbjct: 73 GHLLASGSRDKTVRIWV----------P-NVKGESTVFRAHTATVRSVHFCSDGQLLVTA 121
Query: 399 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
S D+T VW + + H + +FSP +++++AS DKT+K+W + C+
Sbjct: 122 SDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVH 181
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 518
++ H V F G I + G D VK+W RT + Y H + AL+
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSG 241
Query: 519 EMFATGGSDALVNL 532
T SD+ + +
Sbjct: 242 NYLITASSDSTLKI 255
Score = 238 (88.8 bits), Expect = 5.5e-19, P = 5.5e-19
Identities = 65/214 (30%), Positives = 99/214 (46%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH AV V FS ++ L SGS D T+ +W +P + + H +
Sbjct: 17 GHRDAVTCVDFSLNTKH-LASGSMDSTLMIWHM--------KPQSRAYR--FTGHKDAVT 65
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT-FRGHKRGIWSVEFSPVDQVVITASGD 443
+ +P+ L+ +GS+D+T +W +P++ T FR H + SV F Q+++TAS D
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDD 124
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KT+K+WS L + H + V A F G IVS D VKLW + EC+ +Y
Sbjct: 125 KTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC 184
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+H + + A G D V +W T
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRT 218
Score = 205 (77.2 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 65/258 (25%), Positives = 107/258 (41%)
Query: 234 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
R G+ + + + F LA + + V+++ + S V H+ V + C
Sbjct: 56 RFTGHKDAVTCVNF-SPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFC-- 112
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
S G++L VT S D +V++W + + + T H+ V FS +VS S D T+K
Sbjct: 113 SDGQLL-VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPD-GRLIVSASDDKTVK 170
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W D S + HG + + P+ + + D T VW
Sbjct: 171 LW--DKTSRECVHSY--------CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHR 220
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
V ++ H + ++ F P +ITAS D T+KI + +G L T GH +F
Sbjct: 221 LVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS 280
Query: 474 TRGAQIVSCGADGLVKLW 491
G S G+D V +W
Sbjct: 281 RTGEYFASGGSDEQVMVW 298
Score = 144 (55.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 36/108 (33%), Positives = 55/108 (50%)
Query: 4 LLEGA-DRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
L G+ D+ V +W +V G + F+ H V S+ H +D LL + SDD TV+VW
Sbjct: 76 LASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSV--HFCSDGQLLVTASDDKTVKVWS 131
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
++ + +L +H + V + DG ++SA DK V LWD C
Sbjct: 132 THRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Score = 136 (52.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D +++W + + F GHK V+ + F P LL SGS D TVR+W
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH--LLASGSRDKTVRIWVPN 91
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
K H + V S+ SDG L++A DK V +W
Sbjct: 92 VKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVW 130
Score = 131 (51.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 39/136 (28%), Positives = 65/136 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VW H V F PD L+ S SDD TV++WD +++CV
Sbjct: 124 DKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG--RLIVSASDDKTVKLWDKTSRECVH 181
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA-VCAIPPG 127
+ +H VT + G+ + +AG D V +WD R + +L V Y++ A V A+
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTH--RL-VQHYQLHSAAVNALSFH 238
Query: 128 SAFDSFLSSYNQQTIK 143
+ + +++ + T+K
Sbjct: 239 PSGNYLITASSDSTLK 254
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWD +++ H V+++ FHP + L + S D+T+++ DL+ +
Sbjct: 206 GMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGN--YLITASSDSTLKILDLMEGRL 263
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
+ TL H T++A + G S G D+ V +W
Sbjct: 264 LYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +WD C H + H G V+ + FHP + + +G D+ TV+VWD + V
Sbjct: 166 DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHP-SGTCIAAAGMDN-TVKVWDTRTHRLVQ 223
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
H + V +++ G+ LI+A D + + DL +
Sbjct: 224 HYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLME 260
Score = 110 (43.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 25 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 84
+FKGH+ V+ + F +T L SGS D+T+ +W + + H VT + +
Sbjct: 14 HFKGHRDAVTCVDFSLNTKH--LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 85 DGSTLISAGRDKVVNLW 101
G L S RDK V +W
Sbjct: 72 SGHLLASGSRDKTVRIW 88
Score = 56 (24.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
YL A++ +++ DL Y L GH T A S +G D V +W
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPAT---TVAFSRTGEYFASGGSDEQVMVWK 299
Query: 314 S 314
S
Sbjct: 300 S 300
Score = 39 (18.8 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 69 TLDKHFS----RVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
+L++HF VT + + + L S D + +W ++ S
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS 52
>RGD|621245 [details] [associations]
symbol:Plaa "phospholipase A2, activating protein" species:10116
"Rattus norvegicus" [GO:0006954 "inflammatory response"
evidence=IEA;ISO] [GO:0016005 "phospholipase A2 activator activity"
evidence=IEA;ISO] [GO:0043085 "positive regulation of catalytic
activity" evidence=ISO] [GO:0070062 "extracellular vesicular
exosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50176
PROSITE:PS50294 SMART:SM00320 RGD:621245 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006954
GO:GO:0016005 GeneTree:ENSGT00550000074944 HOGENOM:HOG000174247
KO:K14018 InterPro:IPR015155 InterPro:IPR013535 Pfam:PF09070
Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396 CTD:9373
HOVERGEN:HBG008204 OMA:VSECCRF OrthoDB:EOG4DJJVW EMBL:AABR03040245
EMBL:U17901 IPI:IPI00562304 PIR:JC4239 RefSeq:NP_446318.3
UniGene:Rn.7441 ProteinModelPortal:P54319 MINT:MINT-4299720
STRING:P54319 PhosphoSite:P54319 PRIDE:P54319
Ensembl:ENSRNOT00000010621 GeneID:116645 KEGG:rno:116645
UCSC:RGD:621245 InParanoid:P54319 NextBio:619383
ArrayExpress:P54319 Genevestigator:P54319
GermOnline:ENSRNOG00000007753 Uniprot:P54319
Length = 795
Score = 290 (107.1 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 84/270 (31%), Positives = 130/270 (48%)
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVG--TGHM 327
+SCS L GH V L C G + V S+D + RLW DS +R + +GH
Sbjct: 10 LSCS--LPGHELDVRGLVCCLYPPGAFVSV--SRDRTTRLWAPDSPNRGFTEMHCMSGHS 65
Query: 328 GAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
V V S + + +G +DH I ++S D PM L ++ H +
Sbjct: 66 NFVSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDS-------PMPLY---ILKGHKDTV 115
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S D
Sbjct: 116 CSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W G C +TF GH V + L+ + +SC D ++ W + TGEC+ Y
Sbjct: 173 KTIKLWKA--GRCERTFSGHEDCVRGLAILSE-TEFLSCANDASIRRWQI-TGECLGVYY 228
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLW 533
H + I++++V F T D + +W
Sbjct: 229 GHTNYIYSISVFPNCRDFVTTAEDRSLRIW 258
Score = 139 (54.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 313
+A N + ++ L S Y+L GH + V C+LSSGK +++GS D + ++W
Sbjct: 85 IATGGNDHNICIFSLDSPMPLYILKGHKDTV-----CSLSSGKFGTLLSGSWDTTAKVWL 139
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
++ C+ GH AV AV + Q +++GS+D TIK+W
Sbjct: 140 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTIKLW 178
Score = 132 (51.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 40/139 (28%), Positives = 66/139 (47%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVWDLLAKK 65
G D + ++ +D + KGHK V S+ + K L SGS D T +VW L K
Sbjct: 89 GNDHNICIFSLDSPMPLYILKGHKDTVCSL----SSGKFGTLLSGSWDTTAKVW--LNDK 142
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIP 125
C+ TL H + V ++ I + +++ DK + LW + C+ T +E + V +
Sbjct: 143 CMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLW--KAGRCERTFSGHE--DCVRGLA 198
Query: 126 PGSAFDSFLSSYNQQTIKK 144
S + FLS N +I++
Sbjct: 199 ILSETE-FLSCANDASIRR 216
Score = 107 (42.7 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L++TGS D +++LW + RC +GH V +A + + FL S ++D +I+ W
Sbjct: 165 LMLTGSADKTIKLWKA-GRC-ERTFSGHEDCVRGLAILSETE-FL-SCANDASIRRWQIT 220
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
G + V H I S++V PN T ++DR+ +W+ + T
Sbjct: 221 G-----------ECLGVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGECAQ--TI 267
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
R + IW +V+ AS D I++++ +D
Sbjct: 268 RLPAQSIWCCCVLDNGDIVVGAS-DGIIRVFTEAD 301
Score = 93 (37.8 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 35/125 (28%), Positives = 54/125 (43%)
Query: 9 DRKVLVWDVDG---GFCT-HYFKGHKGVVSSILFHPDTD---KSLLFSGSDDATVRVWDL 61
DR +W D GF H GH VS + P +D L+ +G +D + ++ L
Sbjct: 40 DRTTRLWAPDSPNRGFTEMHCMSGHSNFVSCVCIIPSSDIYPHGLIATGGNDHNICIFSL 99
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEA 120
+ + L H V S++ G TL+S D +W L D C +T+ + V A
Sbjct: 100 DSPMPLYILKGHKDTVCSLSSGKFG-TLLSGSWDTTAKVW-LND-KCMMTLQGHTAAVWA 156
Query: 121 VCAIP 125
V +P
Sbjct: 157 VKILP 161
Score = 38 (18.4 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 449 WSISDGSCLK 458
WS+SDG +K
Sbjct: 367 WSVSDGRWIK 376
>UNIPROTKB|P54319 [details] [associations]
symbol:Plaa "Phospholipase A-2-activating protein"
species:10116 "Rattus norvegicus" [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0016005 "phospholipase A2 activator
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50176
PROSITE:PS50294 SMART:SM00320 RGD:621245 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006954
GO:GO:0016005 GeneTree:ENSGT00550000074944 HOGENOM:HOG000174247
KO:K14018 InterPro:IPR015155 InterPro:IPR013535 Pfam:PF09070
Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396 CTD:9373
HOVERGEN:HBG008204 OMA:VSECCRF OrthoDB:EOG4DJJVW EMBL:AABR03040245
EMBL:U17901 IPI:IPI00562304 PIR:JC4239 RefSeq:NP_446318.3
UniGene:Rn.7441 ProteinModelPortal:P54319 MINT:MINT-4299720
STRING:P54319 PhosphoSite:P54319 PRIDE:P54319
Ensembl:ENSRNOT00000010621 GeneID:116645 KEGG:rno:116645
UCSC:RGD:621245 InParanoid:P54319 NextBio:619383
ArrayExpress:P54319 Genevestigator:P54319
GermOnline:ENSRNOG00000007753 Uniprot:P54319
Length = 795
Score = 290 (107.1 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 84/270 (31%), Positives = 130/270 (48%)
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVG--TGHM 327
+SCS L GH V L C G + V S+D + RLW DS +R + +GH
Sbjct: 10 LSCS--LPGHELDVRGLVCCLYPPGAFVSV--SRDRTTRLWAPDSPNRGFTEMHCMSGHS 65
Query: 328 GAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
V V S + + +G +DH I ++S D PM L ++ H +
Sbjct: 66 NFVSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDS-------PMPLY---ILKGHKDTV 115
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S D
Sbjct: 116 CSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W G C +TF GH V + L+ + +SC D ++ W + TGEC+ Y
Sbjct: 173 KTIKLWKA--GRCERTFSGHEDCVRGLAILSE-TEFLSCANDASIRRWQI-TGECLGVYY 228
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLW 533
H + I++++V F T D + +W
Sbjct: 229 GHTNYIYSISVFPNCRDFVTTAEDRSLRIW 258
Score = 139 (54.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 313
+A N + ++ L S Y+L GH + V C+LSSGK +++GS D + ++W
Sbjct: 85 IATGGNDHNICIFSLDSPMPLYILKGHKDTV-----CSLSSGKFGTLLSGSWDTTAKVWL 139
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
++ C+ GH AV AV + Q +++GS+D TIK+W
Sbjct: 140 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTIKLW 178
Score = 132 (51.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 40/139 (28%), Positives = 66/139 (47%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVWDLLAKK 65
G D + ++ +D + KGHK V S+ + K L SGS D T +VW L K
Sbjct: 89 GNDHNICIFSLDSPMPLYILKGHKDTVCSL----SSGKFGTLLSGSWDTTAKVW--LNDK 142
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIP 125
C+ TL H + V ++ I + +++ DK + LW + C+ T +E + V +
Sbjct: 143 CMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLW--KAGRCERTFSGHE--DCVRGLA 198
Query: 126 PGSAFDSFLSSYNQQTIKK 144
S + FLS N +I++
Sbjct: 199 ILSETE-FLSCANDASIRR 216
Score = 107 (42.7 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L++TGS D +++LW + RC +GH V +A + + FL S ++D +I+ W
Sbjct: 165 LMLTGSADKTIKLWKA-GRC-ERTFSGHEDCVRGLAILSETE-FL-SCANDASIRRWQIT 220
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
G + V H I S++V PN T ++DR+ +W+ + T
Sbjct: 221 G-----------ECLGVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGECAQ--TI 267
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
R + IW +V+ AS D I++++ +D
Sbjct: 268 RLPAQSIWCCCVLDNGDIVVGAS-DGIIRVFTEAD 301
Score = 93 (37.8 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 35/125 (28%), Positives = 54/125 (43%)
Query: 9 DRKVLVWDVDG---GFCT-HYFKGHKGVVSSILFHPDTD---KSLLFSGSDDATVRVWDL 61
DR +W D GF H GH VS + P +D L+ +G +D + ++ L
Sbjct: 40 DRTTRLWAPDSPNRGFTEMHCMSGHSNFVSCVCIIPSSDIYPHGLIATGGNDHNICIFSL 99
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEA 120
+ + L H V S++ G TL+S D +W L D C +T+ + V A
Sbjct: 100 DSPMPLYILKGHKDTVCSLSSGKFG-TLLSGSWDTTAKVW-LND-KCMMTLQGHTAAVWA 156
Query: 121 VCAIP 125
V +P
Sbjct: 157 VKILP 161
Score = 38 (18.4 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 449 WSISDGSCLK 458
WS+SDG +K
Sbjct: 367 WSVSDGRWIK 376
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 265 (98.3 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 78/311 (25%), Positives = 143/311 (45%)
Query: 232 SKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-----LAGHSEIVL 286
S+ L +N + +KF + + LA A+ + ++ Y +++++ GH +
Sbjct: 17 SQTLTSHNRAVSSVKF-SSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGI- 74
Query: 287 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
A SS IV+ S D +++LWD E+ + GH V F+ + N +VSG
Sbjct: 75 --SDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSG 131
Query: 347 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 406
S D T+++W D LK V+ AH + ++ + SL+ + S D +
Sbjct: 132 SFDETVRIW-------DVTTGKCLK---VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRI 181
Query: 407 WRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS 465
W V T + S V FSP + ++ + D T+++W+IS LKT+ GH +
Sbjct: 182 WDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVN 241
Query: 466 S--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFA 522
+ + ++F +T G +IVS D V +W + + + + + H + + +A + A
Sbjct: 242 AQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIA 301
Query: 523 TGGSDALVNLW 533
+G D V +W
Sbjct: 302 SGSLDKTVRIW 312
Score = 257 (95.5 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 58/215 (26%), Positives = 100/215 (46%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
T H AV +V FS L S S+D TI+ ++ + ++D +P+ H I
Sbjct: 21 TSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQ-----EFTGHENGI 74
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
+ +A + + + + S D+T +W + + T GH + V F+P ++++ S D
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFD 134
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY- 502
+T++IW ++ G CLK H+ V F G+ IVS DGL ++W TG C+ T
Sbjct: 135 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Query: 503 DKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
D + + + G D + LW+ S+
Sbjct: 195 DDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISS 229
Score = 242 (90.2 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 67/291 (23%), Positives = 134/291 (46%)
Query: 205 LLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQV 264
L +AD+ + YT + + E + + G+ I D+ F + +++ A++ + +
Sbjct: 39 LASASADKTIRTYTINTINDPIAEPV--QEFTGHENGISDVAF-SSDARFIVSASDDKTL 95
Query: 265 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 324
+++D+ + S L GH+ C++ S+ +IV+GS D +VR+WD + C+ V
Sbjct: 96 KLWDVETGSLIKTLIGHTNYAFCVNFNPQSN---MIVSGSFDETVRIWDVTTGKCLKVLP 152
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
H V AV F++ + +VS S D ++W G K ++ ++
Sbjct: 153 AHSDPVTAVDFNRD-GSLIVSSSYDGLCRIWD-SGTGHCV--------KTLIDDENPPVS 202
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE--FSPVD-QVVITAS 441
+ +PN + G+ D T +W + + T+ GH + + FS + + +++ S
Sbjct: 203 FVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGS 262
Query: 442 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
D + +W ++ L+ EGHT +V+ + I S D V++WT
Sbjct: 263 EDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWT 313
Score = 234 (87.4 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 48/167 (28%), Positives = 83/167 (49%)
Query: 376 VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL-----PDLVSVVTFRGHKRGIWSVEF 430
+ +H + ++S+ + + L+ + S D+T + + P V F GH+ GI V F
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 431 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 490
S + +++AS DKT+K+W + GS +KT GHT+ +F + IVS D V++
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRI 139
Query: 491 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
W V TG+C+ H D + A+ + + + D L +W T
Sbjct: 140 WDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Score = 167 (63.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ +D K L +WDV+ G GH + F+P ++ ++ SGS D TVR+WD+
Sbjct: 86 IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSN--MIVSGSFDETVRIWDVT 143
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
KC+ L H VT++ DGS ++S+ D + +WD C T+
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Score = 157 (60.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 65/302 (21%), Positives = 132/302 (43%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V+S+ +SDG L SA DK + + + + P E V+ G
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINT----INDPIAEPVQEFTGHENGI 74
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMD 187
+ +F S ++L++ + G + + + A C+ S++ +S D
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFD 134
Query: 188 DSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKRL 235
++ R + T VLP++ + D L++ ++ + + + + +
Sbjct: 135 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Query: 236 VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC-ALS 294
N + ++F +++ V T ++++++SS GH C+ + +++
Sbjct: 195 DDENPPVSFVRF-SPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVT 253
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
+GK IV+GS+DN V +W+ S+ + GH V VA +N + SGS D T+++
Sbjct: 254 NGK-RIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVA-CHPTENLIASGSLDKTVRI 311
Query: 355 WS 356
W+
Sbjct: 312 WT 313
Score = 126 (49.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
F GH+ +S + F +D + S SDD T+++WD+ + TL H + +
Sbjct: 67 FTGHENGISDVAF--SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQ 124
Query: 86 GSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGSAFDSFLSSYN 138
+ ++S D+ V +WD+ C +P + + V AV GS S SSY+
Sbjct: 125 SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVS--SSYD 176
>MGI|MGI:104810 [details] [associations]
symbol:Plaa "phospholipase A2, activating protein"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0006954 "inflammatory response" evidence=IDA]
[GO:0016005 "phospholipase A2 activator activity" evidence=IDA]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50176
PROSITE:PS50294 SMART:SM00320 MGI:MGI:104810 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006954
GO:GO:0016005 EMBL:CH466527 GeneTree:ENSGT00550000074944
HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 EMBL:AL732597 CTD:9373 HOVERGEN:HBG008204
OMA:VSECCRF OrthoDB:EOG4DJJVW ChiTaRS:PLAA EMBL:AK075934
EMBL:BC139355 EMBL:BC139356 EMBL:BC139773 EMBL:M57958
IPI:IPI00226234 PIR:A40963 RefSeq:NP_766283.2 UniGene:Mm.22724
UniGene:Mm.490101 ProteinModelPortal:P27612 SMR:P27612
MINT:MINT-220705 STRING:P27612 PhosphoSite:P27612 PaxDb:P27612
PRIDE:P27612 Ensembl:ENSMUST00000107107 GeneID:18786 KEGG:mmu:18786
InParanoid:A4QPD6 NextBio:295052 Bgee:P27612 CleanEx:MM_PLAA
Genevestigator:P27612 GermOnline:ENSMUSG00000028577 Uniprot:P27612
Length = 794
Score = 289 (106.8 bits), Expect = 7.2e-22, P = 7.2e-22
Identities = 84/270 (31%), Positives = 132/270 (48%)
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVG--TGHM 327
+SCS L GH V L C G + V S+D + RLW DS +R + +GH
Sbjct: 10 LSCS--LPGHELDVRGLVCCLYPPGAFVSV--SRDRTTRLWAPDSPNRGFTEMHCMSGHS 65
Query: 328 GAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
V V S + + +G +DH I ++S D PM L ++ H +
Sbjct: 66 NFVSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDS-------PMPLY---ILKGHKDTV 115
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S D
Sbjct: 116 CSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W G C +TF GH V + L+ + +SC D ++ W + TGEC+ Y
Sbjct: 173 KTIKLWKA--GRCERTFLGHEDCVRGLAILSE-TEFLSCANDASIRRWQI-TGECLEVYF 228
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLW 533
H + I++++V ++ F T D + +W
Sbjct: 229 GHTNYIYSISVFPNSKDFVTTAEDRSLRIW 258
Score = 139 (54.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 313
+A N + ++ L S Y+L GH + V C+LSSGK +++GS D + ++W
Sbjct: 85 IATGGNDHNICIFSLDSPMPLYILKGHKDTV-----CSLSSGKFGTLLSGSWDTTAKVWL 139
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
++ C+ GH AV AV + Q +++GS+D TIK+W
Sbjct: 140 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTIKLW 178
Score = 134 (52.2 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 43/151 (28%), Positives = 72/151 (47%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVWDLLAKK 65
G D + ++ +D + KGHK V S+ + K L SGS D T +VW L K
Sbjct: 89 GNDHNICIFSLDSPMPLYILKGHKDTVCSL----SSGKFGTLLSGSWDTTAKVW--LNDK 142
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIP 125
C+ TL H + V ++ I + +++ DK + LW + C+ T +E + V +
Sbjct: 143 CMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLW--KAGRCERTFLGHE--DCVRGLA 198
Query: 126 PGSAFDSFLSSYNQQTIKKKR---RSLEIHF 153
S + FLS N +I++ + LE++F
Sbjct: 199 ILSETE-FLSCANDASIRRWQITGECLEVYF 228
Score = 107 (42.7 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L++TGS D +++LW + RC GH V +A + + FL S ++D +I+ W
Sbjct: 165 LMLTGSADKTIKLWKA-GRC-ERTFLGHEDCVRGLAILSETE-FL-SCANDASIRRWQIT 220
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
G + V H I S++V PN T ++DR+ +W+ + T
Sbjct: 221 G-----------ECLEVYFGHTNYIYSISVFPNSKDFVTTAEDRSLRIWKHGECAQ--TI 267
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
R + IW +V+ AS D I++++ S+
Sbjct: 268 RLPAQSIWCCCVLENGDIVVGAS-DGIIRVFTESE 301
Score = 93 (37.8 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 35/125 (28%), Positives = 54/125 (43%)
Query: 9 DRKVLVWDVDG---GFCT-HYFKGHKGVVSSILFHPDTD---KSLLFSGSDDATVRVWDL 61
DR +W D GF H GH VS + P +D L+ +G +D + ++ L
Sbjct: 40 DRTTRLWAPDSPNRGFTEMHCMSGHSNFVSCVCIIPSSDIYPHGLIATGGNDHNICIFSL 99
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEA 120
+ + L H V S++ G TL+S D +W L D C +T+ + V A
Sbjct: 100 DSPMPLYILKGHKDTVCSLSSGKFG-TLLSGSWDTTAKVW-LND-KCMMTLQGHTAAVWA 156
Query: 121 VCAIP 125
V +P
Sbjct: 157 VKILP 161
Score = 38 (18.4 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 449 WSISDGSCLK 458
WS+SDG +K
Sbjct: 367 WSVSDGRWIK 376
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 277 (102.6 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 79/303 (26%), Positives = 138/303 (45%)
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L + G+ + I + F +Q LA + + V+ + S +Y AGH + V C++
Sbjct: 11 LERHFKGHRDAITSVDFSLNTKQ-LASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNF 69
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
SG +L +GS+D +VR+W + V H V +V F Q+ LV+ S D
Sbjct: 70 SP--SGHLL-ASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQS-LVTASDDK 125
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
T+KVWS K ++ H + +P+ L+ + S D+T +W
Sbjct: 126 TVKVWSTH----------RQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKT 175
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
V ++ H + V+F P + AS D T+K+W + L+ ++ H+++V
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 235
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 530
SF G +++ +D +K+ + G + T H+ +A + E FA+GGSD V
Sbjct: 236 SFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 531 NLW 533
+W
Sbjct: 296 MVW 298
Score = 142 (55.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 37/108 (34%), Positives = 56/108 (51%)
Query: 4 LLEGA-DRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
L G+ D+ V +W +V G + F+ H V S+ F D +SL+ + SDD TV+VW
Sbjct: 76 LASGSRDKTVRIWIPNVKGE--STVFRAHTATVRSVHFCSD-GQSLV-TASDDKTVKVWS 131
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+K + +L +H + V + DG ++SA DK V LWD C
Sbjct: 132 THRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSREC 179
Score = 137 (53.3 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 35/99 (35%), Positives = 49/99 (49%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D ++VW + + F GHK V+ + F P LL SGS D TVR+W
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGH--LLASGSRDKTVRIWIPN 91
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
K H + V S+ SDG +L++A DK V +W
Sbjct: 92 VKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 31/102 (30%), Positives = 52/102 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V VWDV +++ H V+++ FHP + L + S D+T+++ DL+ + +
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGN--YLLTASSDSTLKILDLMEGRLLY 265
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW----DLRDY 106
TL H T++A + G S G D+ V +W D+ DY
Sbjct: 266 TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVVDY 307
Score = 129 (50.5 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 27/97 (27%), Positives = 49/97 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +WD C H + H G V+ + FHP + + + S D TV+VWD+ + +
Sbjct: 166 DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG--TCIAAASMDNTVKVWDVRTHRLLQ 223
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
H + V +++ G+ L++A D + + DL +
Sbjct: 224 HYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLME 260
Score = 127 (49.8 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 30/98 (30%), Positives = 46/98 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VW H V F PD L+ S SDD TV++WD +++CV
Sbjct: 124 DKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDG--RLIVSASDDKTVKLWDKTSRECVH 181
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
+ +H VT + G+ + +A D V +WD+R +
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTH 219
Score = 110 (43.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 25 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 84
+FKGH+ ++S+ F +T + L SGS D+ + VW + + H VT + +
Sbjct: 14 HFKGHRDAITSVDFSLNTKQ--LASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSP 71
Query: 85 DGSTLISAGRDKVVNLW 101
G L S RDK V +W
Sbjct: 72 SGHLLASGSRDKTVRIW 88
Score = 56 (24.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
YL A++ +++ DL Y L GH T A S +G D V +W
Sbjct: 243 YLLTASSDSTLKILDLMEGRLLYTLHGHQGPAT---TVAFSRTGEYFASGGSDEQVMVWK 299
Query: 314 S 314
S
Sbjct: 300 S 300
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 276 (102.2 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 71/246 (28%), Positives = 115/246 (46%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
VL GH V A SSG +++ S+D S+R WD S + GH V V S
Sbjct: 337 VLRGHCGPVYSTRFLADSSG---LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDIS 393
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
+ SGS D T ++WSFD P+ + A H D++ + PN + +
Sbjct: 394 P-YSLYFASGSHDRTARLWSFD-----RTYPLR-----IYAGHLADVDCVKFHPNSNYLA 442
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
TGS D+T +W SV F GH+ + S+ FSP + + +A D+ +K+W ++ G+
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 516
K GHT ++ +F + I S D V++W +R C A D ++ + G+
Sbjct: 503 FKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQ 562
Query: 517 KTEMFA 522
+ + +
Sbjct: 563 MSNVLS 568
Score = 230 (86.0 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 55/209 (26%), Positives = 89/209 (42%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH G V + F L+S S D +I+ W ++ + H +
Sbjct: 340 GHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNTV----------LYQGHAYPVW 388
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
+ ++P +GS DRTA +W + + GH + V+F P + T S DK
Sbjct: 389 DVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 448
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
T+++WS G+ ++ F GH VL +F G + S G D +KLW + +G
Sbjct: 449 TVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRG 508
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLW 533
H D I +L + + A+ D V +W
Sbjct: 509 HTDNITSLTFSPDSSLIASASMDNSVRVW 537
Score = 188 (71.2 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 41/172 (23%), Positives = 75/172 (43%)
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGH 421
DD + + + K V+ H + S + S + + S+D + W L + V ++GH
Sbjct: 325 DDEDDDVGTEMK-VLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 383
Query: 422 KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVS 481
+W V+ SP + S D+T ++WS L+ + GH + V F + +
Sbjct: 384 AYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLAT 443
Query: 482 CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
D V+LW+ + G + + H + +LA + A+ G D + LW
Sbjct: 444 GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
Score = 160 (61.4 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 34/106 (32%), Positives = 52/106 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +W G F GH+G V S+ F P+ L S +D +++WDL +
Sbjct: 447 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG--KYLASAGEDQRLKLWDLASGTLFK 504
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT 114
L H +TS+ + D S + SA D V +WD+R+ C + PT
Sbjct: 505 ELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHC--SAPT 548
Score = 149 (57.5 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 33/95 (34%), Positives = 47/95 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W D + + GH V + FHP+++ L +GS D TVR+W V
Sbjct: 405 DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN--YLATGSTDKTVRLWSAQQGNSVR 462
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H V S+A + +G L SAG D+ + LWDL
Sbjct: 463 LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDL 497
Score = 112 (44.5 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 232 SKRL-VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
S RL G+ +L L F +YLA A ++++++DL+S + L GH++ + L
Sbjct: 460 SVRLFTGHRGPVLSLAF-SPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSL-- 516
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCC-----------VGVGTGHMGAVGAVAF 335
S LI + S DNSVR+WD + C VGV TG M V +V F
Sbjct: 517 -TFSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQMSNVLSVQF 571
Score = 85 (35.0 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 37/148 (25%), Positives = 57/148 (38%)
Query: 16 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFS 75
D D G +GH G V S F D+ S L S S+D ++R WDL + H
Sbjct: 328 DDDVGTEMKVLRGHCGPVYSTRFLADS--SGLLSCSEDMSIRYWDLGSFTNTVLYQGHAY 385
Query: 76 RVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGSAFDSFL 134
V + I+ S D+ LW D + L + + + C P S + +
Sbjct: 386 PVWDVDISPYSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATG 444
Query: 135 SSYNQQTIKKKRRSLEIHFITVGERGIV 162
S+ + ++ + T G RG V
Sbjct: 445 STDKTVRLWSAQQGNSVRLFT-GHRGPV 471
Score = 54 (24.1 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 11/44 (25%), Positives = 26/44 (59%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 65
C + F + ++++ P++ LL +G D++ +++W L +KK
Sbjct: 260 CFYAFYNTEQLLNTAEISPES--KLLAAGFDNSCIKLWSLRSKK 301
Score = 44 (20.5 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 274 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 317
C Y ++ L+T +S L+ G ++ ++LW S+
Sbjct: 260 CFYAFYNTEQL---LNTAEISPESKLLAAGFDNSCIKLWSLRSK 300
Score = 38 (18.4 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 338 KLQNFLVSGSSDHTIKV 354
+L+NFL S H+ +V
Sbjct: 76 RLRNFLTDSDSQHSHEV 92
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 277 (102.6 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 78/304 (25%), Positives = 138/304 (45%)
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L + G+ + I L F +Q +A + V V+++ S +Y GH + V C+
Sbjct: 10 LERNFKGHRDAITSLDFSPSGKQ-IASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQ- 67
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
S L+ + S+D +VRLW + + H G+V +V FS Q+ L++ S D
Sbjct: 68 --FSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQS-LLTASDDQ 124
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
+IK+WS K + H + +P+ L+ + S DRT +W
Sbjct: 125 SIKLWSVH----------RQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS 174
Query: 411 DLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
+ TF G S V+F P + TAS D T+++W I + L+ ++ H+++V
Sbjct: 175 SRQLIHTFC-EPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNA 233
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
SF G +++ +D +K+ + G + T H+ ++ + + FA+ GSD
Sbjct: 234 LSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQ 293
Query: 530 VNLW 533
V +W
Sbjct: 294 VMVW 297
Score = 204 (76.9 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 46/161 (28%), Positives = 75/161 (46%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 438
H I SL +P+ + +GS D + VW + F GHK + V+FSP ++
Sbjct: 17 HRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLA 76
Query: 439 TASGDKTIKIW--SISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 496
++S DKT+++W S+ S L F HT SV F G +++ D +KLW+V
Sbjct: 77 SSSRDKTVRLWVPSVKGESVL--FRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQ 134
Query: 497 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ I T +H + + ++ + D V LW S+
Sbjct: 135 KIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASS 175
Score = 139 (54.0 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 48/176 (27%), Positives = 71/176 (40%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V+VW++ + F GHK V+ + F P LL S S D TVR+W K
Sbjct: 39 DASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAH--LLASSSRDKTVRLWVPSVKGESV 96
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPG 127
H V S+ ++DG +L++A D+ + LW + T+ + V P G
Sbjct: 97 LFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDG 156
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIH-FITVGERGIVRMWNADSACLYEQKSSDVTI 182
S + R L IH F G ++ S C+ SSD T+
Sbjct: 157 QLMVSVSDDRTVKLWDASSRQL-IHTFCEPGGYSSYVDFHPSSTCI-ATASSDNTV 210
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
+D V VWD+ +++ H V+++ FHP + L + S D+T+++ DLL + +
Sbjct: 206 SDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNH--LLTASSDSTLKILDLLEGRLL 263
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW----DLRDYS 107
TL H + ++ + G SAG D+ V +W D DYS
Sbjct: 264 YTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDYS 307
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 38/120 (31%), Positives = 58/120 (48%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
FKGH+ ++S+ F P + K + SGS DA+V VW++ + H VT + +
Sbjct: 14 FKGHRDAITSLDFSP-SGKQIA-SGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPS 71
Query: 86 GSTLISAGRDKVVNLW--DLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 143
L S+ RDK V LW ++ S T V +VC G S L++ + Q+IK
Sbjct: 72 AHLLASSSRDKTVRLWVPSVKGESVLFRAHTGS-VRSVCFSADGQ---SLLTASDDQSIK 127
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 37/142 (26%), Positives = 63/142 (44%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR V +WD H F G S + FHP + + + + S D TVRVWD+ +
Sbjct: 165 DRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSS--TCIATASSDNTVRVWDIRTHTLLQ 222
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
H + V +++ G+ L++A D + + DL + T+ ++ A C S
Sbjct: 223 HYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQG-SASCVSFSRS 281
Query: 129 AFDSFLSSYNQQTIKKKRRSLE 150
D F S+ + Q + R + +
Sbjct: 282 G-DQFASAGSDQQVMVWRTNFD 302
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 216 (81.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 72/271 (26%), Positives = 113/271 (41%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAF 335
+L+GH V C C + + D + LW+ C GH GAV + +
Sbjct: 88 LLSGHEGEVYC---CKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 144
Query: 336 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SL 394
+ + L S S+D T+ VW S+ E+ LK H +NS A L
Sbjct: 145 NTD-GSMLFSASTDKTVAVWD----SETGERVKRLKG------HTSFVNSCYPARRGPQL 193
Query: 395 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 454
VCTGS D T +W + +V TF+ + + +V F+ +I+ D IK+W +
Sbjct: 194 VCTGSDDGTVKLWDIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 252
Query: 455 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH--E 506
T GH SV S + G+ ++S D V++W VR C+ + + H E
Sbjct: 253 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFE 312
Query: 507 DKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + A G +D V +W D+T
Sbjct: 313 KNLLRCSWSPDGSKIAGGSADRFVYVW-DTT 342
Score = 186 (70.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 65/260 (25%), Positives = 111/260 (42%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
L GHS V+ L + G +L + S D +V +WDSE+ V GH V + ++
Sbjct: 132 LKGHSGAVMELHYN--TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPAR 188
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--V 395
+ + +GS D T+K+W +++ KA V LAV ND+ +
Sbjct: 189 RGPQLVCTGSDDGTVKLW-------------DIRKKAAVQTFQNTYQVLAVTFNDTSDQI 235
Query: 396 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
+G D VW L T RGH + + S +++ + D T++IW + +
Sbjct: 236 ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFA 295
Query: 456 ----CLKTFEGHT----SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHED 507
C+K F+G+ ++LR S+ G++I AD V +W + + H
Sbjct: 296 PKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAG 355
Query: 508 KIWALAVGKKTEMFATGGSD 527
+ LA + + + SD
Sbjct: 356 SVNELAFHPEEPIILSASSD 375
Score = 184 (69.8 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 52/140 (37%), Positives = 66/140 (47%)
Query: 7 GADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK 64
G DR +L+W+V G C +Y KGH G V + H +TD S+LFS S D TV VWD
Sbjct: 112 GFDRLILLWNVYGD-CDNYATLKGHSGAVMEL--HYNTDGSMLFSASTDKTVAVWDSETG 168
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWDLRDYSCKLTVPTYEMVEAVCA 123
+ V L H S V S G L+ G D V LWD+R K V T++ V A
Sbjct: 169 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK---KAAVQTFQNTYQVLA 225
Query: 124 IPPGSAFDSFLSSYNQQTIK 143
+ D +S IK
Sbjct: 226 VTFNDTSDQIISGGIDNDIK 245
Score = 168 (64.2 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 61/260 (23%), Positives = 110/260 (42%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC-AL 293
L G++ +++L + + + +T+ + V V+D + L GH+ V ++C
Sbjct: 132 LKGHSGAVMELHYNTDGSMLFSASTD-KTVAVWDSETGERVKRLKGHTSFV---NSCYPA 187
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
G L+ TGS D +V+LWD + V + AV F+ ++SG D+ IK
Sbjct: 188 RRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVL-AVTFNDTSDQ-IISGGIDNDIK 245
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL---- 409
VW D Q N K + H + L+++ S + + + D T +W +
Sbjct: 246 VW-------DLRQ--N-KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFA 295
Query: 410 PDLVSVVTFRGH----KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS 465
P V F+G+ ++ + +SP + S D+ + +W + L GH
Sbjct: 296 PKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAG 355
Query: 466 SVLRASFLTRGAQIVSCGAD 485
SV +F I+S +D
Sbjct: 356 SVNELAFHPEEPIILSASSD 375
Score = 154 (59.3 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 40/135 (29%), Positives = 62/135 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VWD + G KGH V+S + L+ +GSDD TV++WD+ K V
Sbjct: 157 DKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTGSDDGTVKLWDIRKKAAVQ 215
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
T + +V ++ +IS G D + +WDLR KLT ++V + S
Sbjct: 216 TFQNTY-QVLAVTFNDTSDQIISGGIDNDIKVWDLRQN--KLTYTMRGHADSVTGLSLSS 272
Query: 129 AFDSFLSSYNQQTIK 143
LS+ T++
Sbjct: 273 EGSYLLSNAMDNTVR 287
Score = 143 (55.4 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 35/152 (23%), Positives = 73/152 (48%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
I++G DN +++WD GH +V ++ S + ++L+S + D+T+++W
Sbjct: 235 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GSYLLSNAMDNTVRIWDVRP 293
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+ E+ + + + V K++ + +P+ S + GS DR VW +
Sbjct: 294 FAPK-ERCVKI-FQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLP 351
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
GH + + F P + ++++AS DK + + I
Sbjct: 352 GHAGSVNELAFHPEEPIILSASSDKRLYMGEI 383
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V +WD+ F+ V++ + F+ +D+ + SG D ++VWDL K
Sbjct: 200 DGTVKLWDIRKKAAVQTFQNTYQVLA-VTFNDTSDQ--IISGGIDNDIKVWDLRQNKLTY 256
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 109
T+ H VT ++++S+GS L+S D V +WD+R ++ K
Sbjct: 257 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPK 297
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 472
++ GH+ ++ +F P + +A D+ I +W++ G C T +GH+ +V+ +
Sbjct: 86 IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 144
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK-TEMFATGGSDALVN 531
T G+ + S D V +W TGE + H + + ++ ++ TG D V
Sbjct: 145 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 204
Query: 532 LW 533
LW
Sbjct: 205 LW 206
Score = 104 (41.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 28/77 (36%), Positives = 37/77 (48%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSD 85
GH+G V FHP + L S D + +W++ C ATL H V + +D
Sbjct: 91 GHEGEVYCCKFHPWGNT--LASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD 147
Query: 86 GSTLISAGRDKVVNLWD 102
GS L SA DK V +WD
Sbjct: 148 GSMLFSASTDKTVAVWD 164
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 260 (96.6 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 82/283 (28%), Positives = 139/283 (49%)
Query: 255 LAVATNIEQ-VQVYDLSS--MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 311
L ++ +++ V+V+ S + + L GH V+ +D SG I+ + S D +RL
Sbjct: 34 LVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSP--SGNIM-ASSSLDAHIRL 90
Query: 312 WDSESRCCV-GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
WD ES + + G + A +VAFS Q+ L +GS H KV F G+ + ++ +L
Sbjct: 91 WDLESGKQIRSIDAGPVDA-WSVAFSPDSQH-LATGS--HVGKVNIF-GV-ETGKKEYSL 144
Query: 371 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 430
+ GK I S+A +P+ + +G+ D ++ + + T GH I S+ F
Sbjct: 145 DTR------GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 431 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 490
S Q+++TAS D IKI+ + S T GH S VL +F A VS +D VK+
Sbjct: 199 STDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKV 258
Query: 491 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
W V C+ T+ H+D++W + + + G D ++++
Sbjct: 259 WDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
Score = 182 (69.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 60/242 (24%), Positives = 106/242 (43%)
Query: 294 SSGKILIVTGSKDNSVRLWD-SESRCCVGVGT-GHMGAVGAVAFSKKLQNFLVSGSSDHT 351
+ G L+++GS D+ V++W S+ R + GH V +V S N + S S D
Sbjct: 29 NDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPS-GNIMASSSLDAH 87
Query: 352 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD 411
I++W + +Q ++ A V D S+A +P+ + TGS ++ +
Sbjct: 88 IRLWDLES----GKQIRSIDAGPV------DAWSVAFSPDSQHLATGSHVGKVNIFGVET 137
Query: 412 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRAS 471
+ + I S+ +SP + + + + D I I+ I+ G L T EGH + +
Sbjct: 138 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 197
Query: 472 FLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 531
F T +V+ DG +K++ V+ AT H + +A F + SD V
Sbjct: 198 FSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVK 257
Query: 532 LW 533
+W
Sbjct: 258 VW 259
Score = 152 (58.6 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 45/200 (22%), Positives = 96/200 (48%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 309
+ Q+LA +++ +V ++ + + Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 310 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 369
++D + + GH + ++ FS Q LV+ S D IK++ D + +
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSTDSQ-LLVTASDDGYIKIY-------DVQ---H 221
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
A ++ HG + ++A +P+D+ + S D++ VW + V TF H+ +W V+
Sbjct: 222 ASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVK 281
Query: 430 FSPVDQVVITASGDKTIKIW 449
++ +++ D+ I ++
Sbjct: 282 YNRNGSKIVSVGDDQEIHVY 301
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 34/106 (32%), Positives = 56/106 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D + ++D+ G H +GH + S+ F TD LL + SDD ++++D+
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF--STDSQLLVTASDDGYIKIYDVQ 220
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
ATL H S V ++A + D + +S+ DK V +WD+ +C
Sbjct: 221 HASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTC 266
Score = 137 (53.3 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 39/152 (25%), Positives = 74/152 (48%)
Query: 391 NDS--LVCTGSQDRTACVWRLPD--LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTI 446
ND LV +GS D VW+ D L GH+ G+ SV+ SP ++ ++S D I
Sbjct: 29 NDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHI 88
Query: 447 KIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKH 505
++W + G +++ + +F + +Q ++ G+ G V ++ V TG+ + D
Sbjct: 89 RLWDLESGKQIRSIDAGPVDAWSVAF-SPDSQHLATGSHVGKVNIFGVETGKKEYSLDTR 147
Query: 506 EDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
I ++A + A+G D ++N++ +T
Sbjct: 148 GKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++DV GH V ++ F PD D + S S D +V+VWD+ A+ CV
Sbjct: 211 DGYIKIYDVQHASLAATLSGHGSWVLNVAFSPD-DAHFV-SSSSDKSVKVWDVSARTCVH 268
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
T H +V + +GS ++S G D+ ++++D
Sbjct: 269 TFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 125 (49.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 36/121 (29%), Positives = 55/121 (45%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ I L F + Q L A++ +++YD+ S + L+GH VL A S
Sbjct: 186 LEGHAMPIRSLTF-STDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVL---NVAFS 241
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
V+ S D SV++WD +R CV H V V +++ +VS D I V
Sbjct: 242 PDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSK-IVSVGDDQEIHV 300
Query: 355 W 355
+
Sbjct: 301 Y 301
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 421 HKRGIWSVEF----SPVDQVVITASGDKTIKIWSISDGSCLKTF--EGHTSSVLRASFLT 474
H+ IWSV + + ++VI+ S D +K+W SD + EGH V+
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSP 74
Query: 475 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
G + S D ++LW + +G+ I + D W++A ++ ATG VN++
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIF 133
Score = 87 (35.7 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD++ G S+ F PD+ L +GS V ++ + K
Sbjct: 85 DAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQH--LATGSHVGKVNIFGVETGKKEY 142
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+LD + S+A + DG L S D ++N++D+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 274 (101.5 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 77/303 (25%), Positives = 137/303 (45%)
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L + G+ + + + F +Q LA + + V+ + + +Y AGH + V C++
Sbjct: 11 LERHFKGHRDAVTSVDFSLNTKQ-LASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNF 69
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
SG +L +GS+D +VR+W + V H V +V F Q+F V+ S D
Sbjct: 70 SP--SGHLL-ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF-VTASDDK 125
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
T+KVWS K ++ H + +P+ L+ + S D+T +W
Sbjct: 126 TVKVWSTH----------RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
V ++ H + V+F P + A D T+K+W + L+ ++ H+++V
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 235
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 530
SF G +V+ +D +K+ + G + T H+ +A + E FA+GGSD V
Sbjct: 236 SFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 531 NLW 533
+W
Sbjct: 296 MVW 298
Score = 138 (53.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 36/108 (33%), Positives = 55/108 (50%)
Query: 4 LLEGA-DRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
L G+ D+ V +W +V G + F+ H V S+ F D +S + + SDD TV+VW
Sbjct: 76 LASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSD-GQSFV-TASDDKTVKVWS 131
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+K + +L +H + V + DG ++SA DK V LWD C
Sbjct: 132 THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Score = 137 (53.3 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 34/110 (30%), Positives = 55/110 (50%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWDV +++ H V+++ FHP + L + S D+T+++ DL+ +
Sbjct: 206 GMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGN--YLVTASSDSTLKILDLMEGRL 263
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW----DLRDYSCKLTV 112
+ TL H T++A + G S G D+ V +W D+ DY L V
Sbjct: 264 LYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDYGEVLRV 313
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VW H V F PD L+ S SDD TV++WD +++CV
Sbjct: 124 DKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDG--RLIVSASDDKTVKLWDKTSRECVH 181
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
+ +H VT + G+ + +AG D V +WD+R +
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 219
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D ++VW + + F GHK V+ + F P LL SGS D TVR+W
Sbjct: 34 LASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGH--LLASGSRDKTVRIWVPN 91
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
K H + V S+ SDG + ++A DK V +W
Sbjct: 92 VKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 72/305 (23%), Positives = 122/305 (40%)
Query: 25 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 84
+FKGH+ V+S+ F +T + L SGS D+ + VW + + H VT + +
Sbjct: 14 HFKGHRDAVTSVDFSLNTKQ--LASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSP 71
Query: 85 DGSTLISAGRDKVVNLW--DLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTI 142
G L S RDK V +W +++ S T V +V G SF+++ + +T+
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHT-ATVRSVHFCSDGQ---SFVTASDDKTV 127
Query: 143 KKKRRSLEIHFITVGER-GIVRM--WNADSACLYEQKSSDVTISFEMDDSKR-------- 191
K + ++ + VR ++ D L S D T+ D + R
Sbjct: 128 KVWSTHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKL-WDKTSRECVHSYCE 185
Query: 192 --GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLG 249
GF T + + C+ A + TV+V + + +L + ++ + L F
Sbjct: 186 HGGFV--TYVDFHPSGTCIAAAG---MDNTVKVWDVRTHRLLQHYQL-HSAAVNALSF-H 238
Query: 250 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 309
YL A++ +++ DL Y L GH T A S +G D V
Sbjct: 239 PSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPAT---TVAFSRTGEYFASGGSDEQV 295
Query: 310 RLWDS 314
+W S
Sbjct: 296 MVWKS 300
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 253 (94.1 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 65/250 (26%), Positives = 112/250 (44%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L+ TGS D R+W + +G H G + A+ ++KK NF++S D T +W D
Sbjct: 239 LLATGSYDGFARIWTKDGNLASTLGQ-HKGPIFALKWNKK-GNFILSAGVDKTTIIW--D 294
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPDLVSVV 416
+ +A+Q + + + N+ A D VC QDR P +
Sbjct: 295 AHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDR-------P----IK 343
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
TF+GH + ++++ P ++ + S D T+KIWS+ +C+ + H + + G
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 477 A---------QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 527
+ S D V+LW V G CI T KH++ ++++A A+G D
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFD 463
Query: 528 ALVNLWHDST 537
V++W+ T
Sbjct: 464 KCVHIWNTQT 473
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 50/214 (23%), Positives = 90/214 (42%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLK----AKAVVAAHG 380
GH V A++ + + L SGS D T ++W+ S + L+
Sbjct: 167 GHESEVFICAWNP-VSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSN 225
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLP-DLVSVVTFRGHKRGIWSVEFSPVDQVVIT 439
KD+ SL +L+ TGS D A +W +L S T HK I++++++ +++
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKWNKKGNFILS 283
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
A DKT IW G + F H++ L + + SC D + + + I
Sbjct: 284 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNT-FASCSTDMCIHVCKLGQDRPI 342
Query: 500 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ H +++ A+ + A+ D + +W
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Score = 158 (60.7 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 40/166 (24%), Positives = 78/166 (46%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV----- 433
H ++N++ P +L+ + S D T +W + V + H + I+++++SP
Sbjct: 348 HTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN 407
Query: 434 ----DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
+ ++ +AS D T+++W + G C+ T H V +F G + S D V
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH 467
Query: 490 LWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSDALVNL 532
+W +TG + +Y + I+ + A G K A+ GS +++L
Sbjct: 468 IWNTQTGALVHSY-RGTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD---TDKS----LLFSGSDDATVRVWDL 61
D + +W + C H + H + +I + P T+ +L S S D+TVR+WD+
Sbjct: 370 DMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV 429
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL KH V S+A + DG L S DK V++W+
Sbjct: 430 DRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Score = 130 (50.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 35/138 (25%), Positives = 62/138 (44%)
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CLKTFEG-- 462
V RGH+ ++ ++PV ++ + SGD T +IW++S+ S C++ EG
Sbjct: 163 VVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIR--EGGQ 220
Query: 463 ---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
V + + G + + DG ++WT + G +T +H+ I+AL KK
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGN 279
Query: 520 MFATGGSDALVNLWHDST 537
+ G D +W T
Sbjct: 280 FILSAGVDKTTIIWDAHT 297
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 52/201 (25%), Positives = 86/201 (42%)
Query: 347 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 406
+++HT + DG D E P N KA V+ H ++ A P L+ +GS D TA +
Sbjct: 142 ANNHT-DMMEVDG---DVEIPPN-KA-VVLRGHESEVFICAWNPVSDLLASGSGDSTARI 195
Query: 407 WRLPD--------LVSVVTFR--GH----KRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
W L + LV R G + + S++++ ++ T S D +IW+
Sbjct: 196 WNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-K 254
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
DG+ T H + + +G I+S G D +W TGE + H AL
Sbjct: 255 DGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAP--AL 312
Query: 513 AVG-KKTEMFATGGSDALVNL 532
V + FA+ +D +++
Sbjct: 313 DVDWQSNNTFASCSTDMCIHV 333
Score = 117 (46.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 31/130 (23%), Positives = 61/130 (46%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K G+ E+ +K+ LA ++ ++++ + +C + L H++ + +
Sbjct: 343 KTFQGHTNEVNAIKW-DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 293 LSSG------KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
G +++ + S D++VRLWD + C+ T H V +VAFS +L SG
Sbjct: 402 TGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD-GRYLASG 460
Query: 347 SSDHTIKVWS 356
S D + +W+
Sbjct: 461 SFDKCVHIWN 470
Score = 85 (35.0 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+++ +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 234 NSEGTLLATGSYDGFARIWTKDGN-LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTII 292
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 293 WDAHTGEAKQQFP 305
Score = 73 (30.8 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 25/89 (28%), Positives = 40/89 (44%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD---KHFSR------- 76
+GH+ V ++P +D LL SGS D+T R+W+L + +H R
Sbjct: 166 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 77 ----VTSMAITSDGSTLISAGRDKVVNLW 101
VTS+ S+G+ L + D +W
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIW 252
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 253 (94.1 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 65/250 (26%), Positives = 112/250 (44%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L+ TGS D R+W + +G H G + A+ ++KK NF++S D T +W D
Sbjct: 239 LLATGSYDGFARIWTKDGNLASTLGQ-HKGPIFALKWNKK-GNFILSAGVDKTTIIW--D 294
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPDLVSVV 416
+ +A+Q + + + N+ A D VC QDR P +
Sbjct: 295 AHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDR-------P----IK 343
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
TF+GH + ++++ P ++ + S D T+KIWS+ +C+ + H + + G
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 477 A---------QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 527
+ S D V+LW V G CI T KH++ ++++A A+G D
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFD 463
Query: 528 ALVNLWHDST 537
V++W+ T
Sbjct: 464 KCVHIWNTQT 473
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 50/214 (23%), Positives = 90/214 (42%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLK----AKAVVAAHG 380
GH V A++ + + L SGS D T ++W+ S + L+
Sbjct: 167 GHESEVFICAWNP-VSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSN 225
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLP-DLVSVVTFRGHKRGIWSVEFSPVDQVVIT 439
KD+ SL +L+ TGS D A +W +L S T HK I++++++ +++
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKWNKKGNFILS 283
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
A DKT IW G + F H++ L + + SC D + + + I
Sbjct: 284 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNT-FASCSTDMCIHVCKLGQDRPI 342
Query: 500 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ H +++ A+ + A+ D + +W
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Score = 158 (60.7 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 40/166 (24%), Positives = 78/166 (46%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV----- 433
H ++N++ P +L+ + S D T +W + V + H + I+++++SP
Sbjct: 348 HTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN 407
Query: 434 ----DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
+ ++ +AS D T+++W + G C+ T H V +F G + S D V
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH 467
Query: 490 LWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSDALVNL 532
+W +TG + +Y + I+ + A G K A+ GS +++L
Sbjct: 468 IWNTQTGALVHSY-RGTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD---TDKS----LLFSGSDDATVRVWDL 61
D + +W + C H + H + +I + P T+ +L S S D+TVR+WD+
Sbjct: 370 DMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV 429
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL KH V S+A + DG L S DK V++W+
Sbjct: 430 DRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Score = 130 (50.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 35/138 (25%), Positives = 62/138 (44%)
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CLKTFEG-- 462
V RGH+ ++ ++PV ++ + SGD T +IW++S+ S C++ EG
Sbjct: 163 VVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIR--EGGQ 220
Query: 463 ---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
V + + G + + DG ++WT + G +T +H+ I+AL KK
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGN 279
Query: 520 MFATGGSDALVNLWHDST 537
+ G D +W T
Sbjct: 280 FILSAGVDKTTIIWDAHT 297
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 52/201 (25%), Positives = 86/201 (42%)
Query: 347 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 406
+++HT + DG D E P N KA V+ H ++ A P L+ +GS D TA +
Sbjct: 142 ANNHT-DMMEVDG---DVEIPPN-KA-VVLRGHESEVFICAWNPVSDLLASGSGDSTARI 195
Query: 407 WRLPD--------LVSVVTFR--GH----KRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
W L + LV R G + + S++++ ++ T S D +IW+
Sbjct: 196 WNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-K 254
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
DG+ T H + + +G I+S G D +W TGE + H AL
Sbjct: 255 DGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAP--AL 312
Query: 513 AVG-KKTEMFATGGSDALVNL 532
V + FA+ +D +++
Sbjct: 313 DVDWQSNNTFASCSTDMCIHV 333
Score = 117 (46.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 31/130 (23%), Positives = 61/130 (46%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K G+ E+ +K+ LA ++ ++++ + +C + L H++ + +
Sbjct: 343 KTFQGHTNEVNAIKW-DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 293 LSSG------KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
G +++ + S D++VRLWD + C+ T H V +VAFS +L SG
Sbjct: 402 TGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD-GRYLASG 460
Query: 347 SSDHTIKVWS 356
S D + +W+
Sbjct: 461 SFDKCVHIWN 470
Score = 85 (35.0 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+++ +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 234 NSEGTLLATGSYDGFARIWTKDGN-LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTII 292
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 293 WDAHTGEAKQQFP 305
Score = 73 (30.8 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 25/89 (28%), Positives = 40/89 (44%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD---KHFSR------- 76
+GH+ V ++P +D LL SGS D+T R+W+L + +H R
Sbjct: 166 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 77 ----VTSMAITSDGSTLISAGRDKVVNLW 101
VTS+ S+G+ L + D +W
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIW 252
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 253 (94.1 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 65/250 (26%), Positives = 112/250 (44%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L+ TGS D R+W + +G H G + A+ ++KK NF++S D T +W D
Sbjct: 239 LLATGSYDGFARIWTKDGNLASTLGQ-HKGPIFALKWNKK-GNFILSAGVDKTTIIW--D 294
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPDLVSVV 416
+ +A+Q + + + N+ A D VC QDR P +
Sbjct: 295 AHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDR-------P----IK 343
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
TF+GH + ++++ P ++ + S D T+KIWS+ +C+ + H + + G
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 477 A---------QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 527
+ S D V+LW V G CI T KH++ ++++A A+G D
Sbjct: 404 PGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFD 463
Query: 528 ALVNLWHDST 537
V++W+ T
Sbjct: 464 KCVHIWNTQT 473
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 72/312 (23%), Positives = 132/312 (42%)
Query: 249 GEEEQYLAVATN-IEQVQVY-DLS-SMSCSYVLAGH-SEIVLCLDTCALSSGKILIVTGS 304
GEE +A N + ++V D+ + + VL GH SE+ +C A + L+ +GS
Sbjct: 133 GEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFIC----AWNPVSDLLASGS 188
Query: 305 KDNSVRLWD-SES----------RCCVGVGTGHMGA---VGAVAFSKKLQNFLVSGSSDH 350
D++ R+W+ SE+ R C+ G + + V ++ ++ + L +GS D
Sbjct: 189 GDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSE-GTLLATGSYDG 247
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
++W+ DG NL + + H I +L + + + D+T +W
Sbjct: 248 FARIWTKDG---------NLAS--TLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAH 296
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
+ F H V++ + + S D I + + +KTF+GHT+ V
Sbjct: 297 TGEAKQQFPFHSAPALDVDWQS-NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA---VGKKTE------MF 521
+ G + SC D +K+W+++ C+ H +I+ + G T M
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLML 415
Query: 522 ATGGSDALVNLW 533
A+ D+ V LW
Sbjct: 416 ASASFDSTVRLW 427
Score = 158 (60.7 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 40/166 (24%), Positives = 78/166 (46%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV----- 433
H ++N++ P +L+ + S D T +W + V + H + I+++++SP
Sbjct: 348 HTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN 407
Query: 434 ----DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
+ ++ +AS D T+++W + G C+ T H V +F G + S D V
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH 467
Query: 490 LWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSDALVNL 532
+W +TG + +Y + I+ + A G K A+ GS +++L
Sbjct: 468 IWNTQTGALVHSY-RGTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD---TDKS----LLFSGSDDATVRVWDL 61
D + +W + C H + H + +I + P T+ +L S S D+TVR+WD+
Sbjct: 370 DMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV 429
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL KH V S+A + DG L S DK V++W+
Sbjct: 430 DRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Score = 130 (50.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 35/138 (25%), Positives = 62/138 (44%)
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CLKTFEG-- 462
V RGH+ ++ ++PV ++ + SGD T +IW++S+ S C++ EG
Sbjct: 163 VVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIR--EGGQ 220
Query: 463 ---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
V + + G + + DG ++WT + G +T +H+ I+AL KK
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGN 279
Query: 520 MFATGGSDALVNLWHDST 537
+ G D +W T
Sbjct: 280 FILSAGVDKTTIIWDAHT 297
Score = 117 (46.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 31/130 (23%), Positives = 61/130 (46%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K G+ E+ +K+ LA ++ ++++ + +C + L H++ + +
Sbjct: 343 KTFQGHTNEVNAIKW-DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 293 LSSG------KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
G +++ + S D++VRLWD + C+ T H V +VAFS +L SG
Sbjct: 402 TGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD-GRYLASG 460
Query: 347 SSDHTIKVWS 356
S D + +W+
Sbjct: 461 SFDKCVHIWN 470
Score = 85 (35.0 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+++ +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 234 NSEGTLLATGSYDGFARIWTKDGN-LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTII 292
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 293 WDAHTGEAKQQFP 305
Score = 73 (30.8 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-----------LAKKCVAT--LDKH 73
+GH+ V ++P +D LL SGS D+T R+W+L + + C+ D
Sbjct: 166 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVP 223
Query: 74 FSR-VTSMAITSDGSTLISAGRDKVVNLW 101
++ VTS+ S+G+ L + D +W
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIW 252
Score = 37 (18.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 23/96 (23%), Positives = 31/96 (32%)
Query: 73 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 132
H S V A L S D +W+L + S + PT ++V C G S
Sbjct: 168 HESEVFICAWNPVSDLLASGSGDSTARIWNLSENST--SGPT-QLVLRHCIREGGQDVPS 224
Query: 133 FLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNAD 168
N+ S T G R+W D
Sbjct: 225 -----NKDVTSLDWNSEGTLLATGSYDGFARIWTKD 255
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 255 (94.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 277 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 335
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 255 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 306
Query: 336 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 395
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 307 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 354
Query: 396 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 355 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 412
Query: 456 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 506
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 413 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 461
Score = 203 (76.5 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 56/194 (28%), Positives = 90/194 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 354 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 401
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 402 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 459
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY---DKHEDKIWALAVGKKTE 519
H S L + + +VS AD VK+W ++TG+C+ T +KH+ + L K
Sbjct: 460 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-- 515
Query: 520 MFATGGSDALVNLW 533
T D V LW
Sbjct: 516 FVITSSDDGTVKLW 529
Score = 201 (75.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
LK+ V+ H + + + +V +GS D T VW + T GH G+WS +
Sbjct: 250 LKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 308
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D ++
Sbjct: 309 MR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATLR 364
Query: 490 LWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 537
+W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 365 VWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 410
Score = 176 (67.0 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 350 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 407
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 408 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 465
Query: 511 ALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + +G +D+ V +W T
Sbjct: 466 GMEL--KDNILVSGNADSTVKIWDIKT 490
Score = 172 (65.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
Q R WR +L S +GH I ++F +++ S D T+K+WS G CL+
Sbjct: 238 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR 295
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 518
T GHT V + R I+S D +K+W TGECI T H + + + +K
Sbjct: 296 TLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 353
Query: 519 EMFATGGSDALVNLWHDST 537
+ +G DA + +W T
Sbjct: 354 VV--SGSRDATLRVWDIET 370
Score = 170 (64.9 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 327 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 386
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 378 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 427
Query: 387 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 445
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 428 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 482
Query: 446 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
+KIW I G CL+T +G H S+V F +++ DG VKLW ++TGE I
Sbjct: 483 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFI 537
Score = 160 (61.4 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWDV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+
Sbjct: 440 DTSIRVWDVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQ 495
Query: 69 TL---DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
TL +KH S VT + + +I++ D V LWDL+
Sbjct: 496 TLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 532
Score = 154 (59.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD+
Sbjct: 314 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWDIE 369
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
+C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 370 TGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 417
Score = 153 (58.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 37/110 (33%), Positives = 55/110 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ GA D V VWD + C H +GH V S+ F D + SGS D ++RVWD+
Sbjct: 394 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVE 449
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
C+ TL H S + M + + L+S D V +WD++ C T+
Sbjct: 450 TGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTL 497
Score = 149 (57.5 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWD++ G C H GH V + + D + SG+ D V+VWD + C+
Sbjct: 360 DATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSGAYDFMVKVWDPETETCLH 415
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
TL H +RV S+ DG ++S D + +WD+ +C T+ ++
Sbjct: 416 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 461
Score = 144 (55.7 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 386 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 441
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 442 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 489
Query: 411 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 490 TGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIR 538
Score = 140 (54.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 71/313 (22%), Positives = 135/313 (43%)
Query: 53 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
D R +L + K + D H +T + G+ ++S D + +W C T
Sbjct: 242 DTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 296
Query: 113 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 169
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 297 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 351
Query: 170 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 225
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 352 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 408
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 409 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 463
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 342
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 464 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NF 516
Query: 343 LVSGSSDHTIKVW 355
+++ S D T+K+W
Sbjct: 517 VITSSDDGTVKLW 529
Score = 129 (50.5 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+D L VW G C GH G V S + ++ SGS D T++VW+
Sbjct: 274 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN----IIISGSTDRTLKVWNAE 329
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+C+ TL H S V M + ++S RD + +WD+ C
Sbjct: 330 TGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQC 373
Score = 97 (39.2 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 27 KGHKG-VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
KGH V++ + F + + SGSDD T++VW + KC+ TL H V S + +
Sbjct: 257 KGHDDHVITCLQFCGNR----IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 312
Query: 86 GSTLISAGRDKVVNLWDLRDYSC 108
+IS D+ + +W+ C
Sbjct: 313 --IIISGSTDRTLKVWNAETGEC 333
>CGD|CAL0002491 [details] [associations]
symbol:DIP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0034388 "Pwp2p-containing
subcomplex of 90S preribosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030515 "snoRNA binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0002491 GO:GO:0071216 GO:GO:0036180 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690 GO:GO:0009267
EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0036170 GO:GO:0032040
InterPro:IPR007148 Pfam:PF04003 KO:K14556 RefSeq:XP_717569.1
RefSeq:XP_717643.1 ProteinModelPortal:Q5A756 STRING:Q5A756
GeneID:3640762 GeneID:3640827 KEGG:cal:CaO19.12572
KEGG:cal:CaO19.5106 Uniprot:Q5A756
Length = 981
Score = 231 (86.4 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 75/319 (23%), Positives = 136/319 (42%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC--SYVLAGHSEIVLC----- 287
L+G+ +I + ++ + LA A+N E +++++ S + ++VL G LC
Sbjct: 414 LLGHRFDIRAMDISPQDNKLLATASNGE-LKIWNTRSYNVIRTFVLEGG--YALCCKFLP 470
Query: 288 ---LDTCALSSGKILIVTGSKDNSV-RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQ--- 340
L +G + + + + V R+ + S VG G A +S +
Sbjct: 471 GGTLIVVGFKNGDLELYDLATSSLVDRVEKAHSAITVG-GAAPSNDDSAAIWSLDITPDG 529
Query: 341 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH------GKDINSLAVAPNDSL 394
LV+G +D +K W+F + D N + H +D+ + ++P+
Sbjct: 530 KTLVTGGNDKCVKFWNFK-VEQDIIPGTNTTVSHLKFVHTQTLELNEDVLCVRISPDAKY 588
Query: 395 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 454
+ + V L L +T GH+ + S++ S +++IT+S DK IKIW + G
Sbjct: 589 LAISLLNNNVQVVFLDTLKLFLTLYGHRLPVLSIDISHDSKLIITSSADKNIKIWGLDFG 648
Query: 455 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 514
C K+ H S++ F+ S G DGL+K W ECI H+ ++W +A+
Sbjct: 649 DCHKSIFAHQDSIMNVRFIGDTHNFFSSGKDGLIKYWDGDKFECIQRLPAHQSEVWCMAI 708
Query: 515 GKKTEMFATGGSDALVNLW 533
+ D + LW
Sbjct: 709 SDDGLFMCSTSHDHSIRLW 727
Score = 143 (55.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 30/102 (29%), Positives = 46/102 (45%)
Query: 4 LLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 63
+ AD+ + +W +D G C H+ + ++ F DT FS D ++ WD
Sbjct: 632 ITSSADKNIKIWGLDFGDCHKSIFAHQDSIMNVRFIGDTHN--FFSSGKDGLIKYWDGDK 689
Query: 64 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
+C+ L H S V MAI+ DG + S D + LW D
Sbjct: 690 FECIQRLPAHQSEVWCMAISDDGLFMCSTSHDHSIRLWSATD 731
Score = 143 (55.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 94/462 (20%), Positives = 193/462 (41%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD+ F+GH ++ + F D + + L SGS D+++ +WDL+ + +
Sbjct: 100 DGSIKIWDISSNSVIINFEGHNSSITQLKF--DKNGTRLVSGSSDSSIIMWDLIGEVGMF 157
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
L H +T + + S+ G D V ++ D+ DY ++V +++ + +
Sbjct: 158 KLKGHKGPITGLELLSEQQNTQQDG-DNVDDVDDMDDYL--VSVSKDGLIK-LWELKSQQ 213
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDD 188
++ L+ N+ + ++ IT G + V++W+ D + L + SFE
Sbjct: 214 CIETHLAHSNECWAMGINPTKDM-LITSGNKDQVKVWSLDLS-LEDGLKIGERGSFEKTS 271
Query: 189 SKRG----FTAATVLPSNQGLLCV----TADQQLLLYTTVEVPEKKMELIL-SKRLV--G 237
R F + S+ L+ + AD+ + ++ E K + +KRL G
Sbjct: 272 KSRSNEIAFKSLKSSSSSASLIQLFSIQNADRTMEIFRIRSEDEIKRGITKRTKRLKDKG 331
Query: 238 YNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGK 297
+E+ + L+ L E + + T ++ +C +I++ L ++
Sbjct: 332 LDEQEI-LESLQSSEISMLI-TPFTTMRTMAKIKSACWTNNIKKLDILMSLTNNSIEYHT 389
Query: 298 ILIV-TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
I + T K S L+ S + + + GH + A+ S + N L++ +S+ +K+W+
Sbjct: 390 IPVPETPKKAQSADLY-SVKQHTIDL-LGHRFDIRAMDISPQ-DNKLLATASNGELKIWN 446
Query: 357 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVA--PNDSLVCTGSQDRTACVWRLPDLVS 414
S + + L+ + +L V N L ++ V R+ S
Sbjct: 447 TR--SYNVIRTFVLEGGYALCCKFLPGGTLIVVGFKNGDLELYDLAT-SSLVDRVEKAHS 503
Query: 415 VVTFRG------HKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+T G IWS++ +P + ++T DK +K W+
Sbjct: 504 AITVGGAAPSNDDSAAIWSLDITPDGKTLVTGGNDKCVKFWN 545
Score = 139 (54.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 57/247 (23%), Positives = 107/247 (43%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+I G D S+++WD S + GH ++ + F K LVSGSSD +I +W
Sbjct: 93 IIAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLKFDKNGTR-LVSGSSDSSIIMWDLI 151
Query: 359 G-----LSDDAEQPMN----LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
G + P+ L + G +++ V D + + S+D +W L
Sbjct: 152 GEVGMFKLKGHKGPITGLELLSEQQNTQQDGDNVDD--VDDMDDYLVSVSKDGLIKLWEL 209
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS----DGSCLKTFE-G-- 462
+ T H W++ +P ++IT+ +K+WS+ DG LK E G
Sbjct: 210 KSQQCIETHLAHSNECWAMGINPTKDMLITSGNKDQVKVWSLDLSLEDG--LKIGERGSF 267
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE-CIATYD-KHEDKIWALAVGKKTEM 520
+S R++ + + S + L++L++++ + + + + ED+I + K+T+
Sbjct: 268 EKTSKSRSNEIAFKSLKSSSSSASLIQLFSIQNADRTMEIFRIRSEDEI-KRGITKRTKR 326
Query: 521 FATGGSD 527
G D
Sbjct: 327 LKDKGLD 333
Score = 125 (49.1 bits), Expect = 7.9e-10, Sum P(3) = 7.9e-10
Identities = 80/374 (21%), Positives = 141/374 (37%)
Query: 148 SLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLC 207
S+E H I V E A SA LY K + + D + A + P + LL
Sbjct: 384 SIEYHTIPVPETPK----KAQSADLYSVKQHTIDLLGHRFDIR----AMDISPQDNKLLA 435
Query: 208 VTADQQLLLYTTVE---VPEKKME---LILSKRLVGYNEEILDLKFLGEEEQY-LAVATN 260
++ +L ++ T + +E + K L G ++ K G+ E Y LA ++
Sbjct: 436 TASNGELKIWNTRSYNVIRTFVLEGGYALCCKFLPGGTLIVVGFKN-GDLELYDLATSSL 494
Query: 261 IEQVQ-VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS--ESR 317
+++V+ + ++ + S + LD GK L VTG D V+ W+ E
Sbjct: 495 VDRVEKAHSAITVGGAAPSNDDSAAIWSLDITP--DGKTL-VTGGNDKCVKFWNFKVEQD 551
Query: 318 CCVGVGT--GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM--NLKAK 373
G T H+ V V S D K + L+++ + LK
Sbjct: 552 IIPGTNTTVSHLKFVHTQTLELNEDVLCVRISPD--AKYLAISLLNNNVQVVFLDTLKLF 609
Query: 374 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 433
+ H + S+ ++ + L+ T S D+ +W L + H+ I +V F
Sbjct: 610 LTLYGHRLPVLSIDISHDSKLIITSSADKNIKIWGLDFGDCHKSIFAHQDSIMNVRFIGD 669
Query: 434 DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 493
++ D IK W C++ H S V + G + S D ++LW+
Sbjct: 670 THNFFSSGKDGLIKYWDGDKFECIQRLPAHQSEVWCMAISDDGLFMCSTSHDHSIRLWSA 729
Query: 494 RTGECIATYDKHED 507
+ +K ++
Sbjct: 730 TDDQVFLEEEKEKE 743
Score = 119 (46.9 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+VS DGL+KLW +++ +CI T+ H ++ WA+ + +M T G+ V +W
Sbjct: 195 LVSVSKDGLIKLWELKSQQCIETHLAHSNECWAMGINPTKDMLITSGNKDQVKVW 249
Score = 114 (45.2 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 18/71 (25%), Positives = 40/71 (56%)
Query: 33 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 92
VS + +H +T+ ++ +G D ++++WD+ + + + H S +T + +G+ L+S
Sbjct: 82 VSYLTYHQETN--IIAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLKFDKNGTRLVSG 139
Query: 93 GRDKVVNLWDL 103
D + +WDL
Sbjct: 140 SSDSSIIMWDL 150
Score = 105 (42.0 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 30/116 (25%), Positives = 52/116 (44%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILF-------HPDTDK--------SLL 47
L+ G+ D +++WD+ G KGHKG ++ + D D L
Sbjct: 136 LVSGSSDSSIIMWDLIGEVGMFKLKGHKGPITGLELLSEQQNTQQDGDNVDDVDDMDDYL 195
Query: 48 FSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
S S D +++W+L +++C+ T H + +M I LI++G V +W L
Sbjct: 196 VSVSKDGLIKLWELKSQQCIETHLAHSNECWAMGINPTKDMLITSGNKDQVKVWSL 251
Score = 104 (41.7 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQI 479
GH+ I +++ SP D ++ + + +KIW+ + ++TF L FL G I
Sbjct: 416 GHRFDIRAMDISPQDNKLLATASNGELKIWNTRSYNVIRTFVLEGGYALCCKFLPGGTLI 475
Query: 480 VSCGADGLVKLWTVRTGECIATYDK-H------------EDK--IWALAVGKKTEMFATG 524
V +G ++L+ + T + +K H +D IW+L + + TG
Sbjct: 476 VVGFKNGDLELYDLATSSLVDRVEKAHSAITVGGAAPSNDDSAAIWSLDITPDGKTLVTG 535
Query: 525 GSDALVNLWH 534
G+D V W+
Sbjct: 536 GNDKCVKFWN 545
Score = 101 (40.6 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 43/175 (24%), Positives = 76/175 (43%)
Query: 250 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 309
+E +A ++++D+SS S GH+ + L +V+GS D+S+
Sbjct: 89 QETNIIAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLK---FDKNGTRLVSGSSDSSI 145
Query: 310 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSS--------DHTIKVWSFDGLS 361
+WD + GH G + + + QN G + D+ + V S DGL
Sbjct: 146 IMWDLIGEVGMFKLKGHKGPITGLELLSEQQNTQQDGDNVDDVDDMDDYLVSV-SKDGLI 204
Query: 362 DDAEQPMNLKAKAVVA---AHGKDINSLAVAPN-DSLVCTGSQDRTACVWRLPDL 412
E LK++ + AH + ++ + P D L+ +G++D+ VW L DL
Sbjct: 205 KLWE----LKSQQCIETHLAHSNECWAMGINPTKDMLITSGNKDQVK-VWSL-DL 253
Score = 83 (34.3 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 34/174 (19%), Positives = 60/174 (34%)
Query: 308 SVRLWDSESRCCVGVGTGHMGAV----GAVAFSKKLQNFLVSGSSD---HTIKVWSFDGL 360
S +D E C GV T V S + L SG + IK
Sbjct: 4 SYNRYDQEK--CFGVITSQANIVWLPPSETQSSTSMGRALTSGLEEILIWDIKTGEIMNR 61
Query: 361 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG 420
D P + A V ++ L +++ G D + +W + ++ F G
Sbjct: 62 MSDGLTPGSSNASTTVPP--SPVSYLTYHQETNIIAAGYTDGSIKIWDISSNSVIINFEG 119
Query: 421 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 474
H I ++F +++ S D +I +W + + +GH + L+
Sbjct: 120 HNSSITQLKFDKNGTRLVSGSSDSSIIMWDLIGEVGMFKLKGHKGPITGLELLS 173
Score = 39 (18.8 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 636 LFQLFNIHPPTEIIEIKGISDVLEGLIPYTQR 667
LF + N EI I+ ++ G+ T+R
Sbjct: 295 LFSIQNADRTMEIFRIRSEDEIKRGITKRTKR 326
Score = 38 (18.4 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 570 AIQVAFELRRPHKLFELFASVCRKREAELQIEKALHALGKEEIRQLLEYVREWNTKPKL 628
+I +AF + + + + + R A Q++ AL L +LL+++ W K +
Sbjct: 829 SILLAFNMTASQYVLNVLSKI---RPA--QLDDALLVLPFSYSLKLLQFIEIWTNKENI 882
>UNIPROTKB|Q5A756 [details] [associations]
symbol:DIP2 "Putative uncharacterized protein DIP2"
species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0032040 "small-subunit processome"
evidence=IDA] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0036170 "filamentous growth of a population of unicellular
organisms in response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0002491 GO:GO:0071216
GO:GO:0036180 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690
GO:GO:0009267 EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0036170
GO:GO:0032040 InterPro:IPR007148 Pfam:PF04003 KO:K14556
RefSeq:XP_717569.1 RefSeq:XP_717643.1 ProteinModelPortal:Q5A756
STRING:Q5A756 GeneID:3640762 GeneID:3640827 KEGG:cal:CaO19.12572
KEGG:cal:CaO19.5106 Uniprot:Q5A756
Length = 981
Score = 231 (86.4 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 75/319 (23%), Positives = 136/319 (42%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC--SYVLAGHSEIVLC----- 287
L+G+ +I + ++ + LA A+N E +++++ S + ++VL G LC
Sbjct: 414 LLGHRFDIRAMDISPQDNKLLATASNGE-LKIWNTRSYNVIRTFVLEGG--YALCCKFLP 470
Query: 288 ---LDTCALSSGKILIVTGSKDNSV-RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQ--- 340
L +G + + + + V R+ + S VG G A +S +
Sbjct: 471 GGTLIVVGFKNGDLELYDLATSSLVDRVEKAHSAITVG-GAAPSNDDSAAIWSLDITPDG 529
Query: 341 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH------GKDINSLAVAPNDSL 394
LV+G +D +K W+F + D N + H +D+ + ++P+
Sbjct: 530 KTLVTGGNDKCVKFWNFK-VEQDIIPGTNTTVSHLKFVHTQTLELNEDVLCVRISPDAKY 588
Query: 395 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 454
+ + V L L +T GH+ + S++ S +++IT+S DK IKIW + G
Sbjct: 589 LAISLLNNNVQVVFLDTLKLFLTLYGHRLPVLSIDISHDSKLIITSSADKNIKIWGLDFG 648
Query: 455 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 514
C K+ H S++ F+ S G DGL+K W ECI H+ ++W +A+
Sbjct: 649 DCHKSIFAHQDSIMNVRFIGDTHNFFSSGKDGLIKYWDGDKFECIQRLPAHQSEVWCMAI 708
Query: 515 GKKTEMFATGGSDALVNLW 533
+ D + LW
Sbjct: 709 SDDGLFMCSTSHDHSIRLW 727
Score = 143 (55.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 30/102 (29%), Positives = 46/102 (45%)
Query: 4 LLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 63
+ AD+ + +W +D G C H+ + ++ F DT FS D ++ WD
Sbjct: 632 ITSSADKNIKIWGLDFGDCHKSIFAHQDSIMNVRFIGDTHN--FFSSGKDGLIKYWDGDK 689
Query: 64 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
+C+ L H S V MAI+ DG + S D + LW D
Sbjct: 690 FECIQRLPAHQSEVWCMAISDDGLFMCSTSHDHSIRLWSATD 731
Score = 143 (55.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 94/462 (20%), Positives = 193/462 (41%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD+ F+GH ++ + F D + + L SGS D+++ +WDL+ + +
Sbjct: 100 DGSIKIWDISSNSVIINFEGHNSSITQLKF--DKNGTRLVSGSSDSSIIMWDLIGEVGMF 157
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
L H +T + + S+ G D V ++ D+ DY ++V +++ + +
Sbjct: 158 KLKGHKGPITGLELLSEQQNTQQDG-DNVDDVDDMDDYL--VSVSKDGLIK-LWELKSQQ 213
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDD 188
++ L+ N+ + ++ IT G + V++W+ D + L + SFE
Sbjct: 214 CIETHLAHSNECWAMGINPTKDM-LITSGNKDQVKVWSLDLS-LEDGLKIGERGSFEKTS 271
Query: 189 SKRG----FTAATVLPSNQGLLCV----TADQQLLLYTTVEVPEKKMELIL-SKRLV--G 237
R F + S+ L+ + AD+ + ++ E K + +KRL G
Sbjct: 272 KSRSNEIAFKSLKSSSSSASLIQLFSIQNADRTMEIFRIRSEDEIKRGITKRTKRLKDKG 331
Query: 238 YNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGK 297
+E+ + L+ L E + + T ++ +C +I++ L ++
Sbjct: 332 LDEQEI-LESLQSSEISMLI-TPFTTMRTMAKIKSACWTNNIKKLDILMSLTNNSIEYHT 389
Query: 298 ILIV-TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
I + T K S L+ S + + + GH + A+ S + N L++ +S+ +K+W+
Sbjct: 390 IPVPETPKKAQSADLY-SVKQHTIDL-LGHRFDIRAMDISPQ-DNKLLATASNGELKIWN 446
Query: 357 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVA--PNDSLVCTGSQDRTACVWRLPDLVS 414
S + + L+ + +L V N L ++ V R+ S
Sbjct: 447 TR--SYNVIRTFVLEGGYALCCKFLPGGTLIVVGFKNGDLELYDLAT-SSLVDRVEKAHS 503
Query: 415 VVTFRG------HKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+T G IWS++ +P + ++T DK +K W+
Sbjct: 504 AITVGGAAPSNDDSAAIWSLDITPDGKTLVTGGNDKCVKFWN 545
Score = 139 (54.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 57/247 (23%), Positives = 107/247 (43%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+I G D S+++WD S + GH ++ + F K LVSGSSD +I +W
Sbjct: 93 IIAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLKFDKNGTR-LVSGSSDSSIIMWDLI 151
Query: 359 G-----LSDDAEQPMN----LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
G + P+ L + G +++ V D + + S+D +W L
Sbjct: 152 GEVGMFKLKGHKGPITGLELLSEQQNTQQDGDNVDD--VDDMDDYLVSVSKDGLIKLWEL 209
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS----DGSCLKTFE-G-- 462
+ T H W++ +P ++IT+ +K+WS+ DG LK E G
Sbjct: 210 KSQQCIETHLAHSNECWAMGINPTKDMLITSGNKDQVKVWSLDLSLEDG--LKIGERGSF 267
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE-CIATYD-KHEDKIWALAVGKKTEM 520
+S R++ + + S + L++L++++ + + + + ED+I + K+T+
Sbjct: 268 EKTSKSRSNEIAFKSLKSSSSSASLIQLFSIQNADRTMEIFRIRSEDEI-KRGITKRTKR 326
Query: 521 FATGGSD 527
G D
Sbjct: 327 LKDKGLD 333
Score = 125 (49.1 bits), Expect = 7.9e-10, Sum P(3) = 7.9e-10
Identities = 80/374 (21%), Positives = 141/374 (37%)
Query: 148 SLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLC 207
S+E H I V E A SA LY K + + D + A + P + LL
Sbjct: 384 SIEYHTIPVPETPK----KAQSADLYSVKQHTIDLLGHRFDIR----AMDISPQDNKLLA 435
Query: 208 VTADQQLLLYTTVE---VPEKKME---LILSKRLVGYNEEILDLKFLGEEEQY-LAVATN 260
++ +L ++ T + +E + K L G ++ K G+ E Y LA ++
Sbjct: 436 TASNGELKIWNTRSYNVIRTFVLEGGYALCCKFLPGGTLIVVGFKN-GDLELYDLATSSL 494
Query: 261 IEQVQ-VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS--ESR 317
+++V+ + ++ + S + LD GK L VTG D V+ W+ E
Sbjct: 495 VDRVEKAHSAITVGGAAPSNDDSAAIWSLDITP--DGKTL-VTGGNDKCVKFWNFKVEQD 551
Query: 318 CCVGVGT--GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM--NLKAK 373
G T H+ V V S D K + L+++ + LK
Sbjct: 552 IIPGTNTTVSHLKFVHTQTLELNEDVLCVRISPD--AKYLAISLLNNNVQVVFLDTLKLF 609
Query: 374 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 433
+ H + S+ ++ + L+ T S D+ +W L + H+ I +V F
Sbjct: 610 LTLYGHRLPVLSIDISHDSKLIITSSADKNIKIWGLDFGDCHKSIFAHQDSIMNVRFIGD 669
Query: 434 DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 493
++ D IK W C++ H S V + G + S D ++LW+
Sbjct: 670 THNFFSSGKDGLIKYWDGDKFECIQRLPAHQSEVWCMAISDDGLFMCSTSHDHSIRLWSA 729
Query: 494 RTGECIATYDKHED 507
+ +K ++
Sbjct: 730 TDDQVFLEEEKEKE 743
Score = 119 (46.9 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+VS DGL+KLW +++ +CI T+ H ++ WA+ + +M T G+ V +W
Sbjct: 195 LVSVSKDGLIKLWELKSQQCIETHLAHSNECWAMGINPTKDMLITSGNKDQVKVW 249
Score = 114 (45.2 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 18/71 (25%), Positives = 40/71 (56%)
Query: 33 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 92
VS + +H +T+ ++ +G D ++++WD+ + + + H S +T + +G+ L+S
Sbjct: 82 VSYLTYHQETN--IIAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLKFDKNGTRLVSG 139
Query: 93 GRDKVVNLWDL 103
D + +WDL
Sbjct: 140 SSDSSIIMWDL 150
Score = 105 (42.0 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 30/116 (25%), Positives = 52/116 (44%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILF-------HPDTDK--------SLL 47
L+ G+ D +++WD+ G KGHKG ++ + D D L
Sbjct: 136 LVSGSSDSSIIMWDLIGEVGMFKLKGHKGPITGLELLSEQQNTQQDGDNVDDVDDMDDYL 195
Query: 48 FSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
S S D +++W+L +++C+ T H + +M I LI++G V +W L
Sbjct: 196 VSVSKDGLIKLWELKSQQCIETHLAHSNECWAMGINPTKDMLITSGNKDQVKVWSL 251
Score = 104 (41.7 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQI 479
GH+ I +++ SP D ++ + + +KIW+ + ++TF L FL G I
Sbjct: 416 GHRFDIRAMDISPQDNKLLATASNGELKIWNTRSYNVIRTFVLEGGYALCCKFLPGGTLI 475
Query: 480 VSCGADGLVKLWTVRTGECIATYDK-H------------EDK--IWALAVGKKTEMFATG 524
V +G ++L+ + T + +K H +D IW+L + + TG
Sbjct: 476 VVGFKNGDLELYDLATSSLVDRVEKAHSAITVGGAAPSNDDSAAIWSLDITPDGKTLVTG 535
Query: 525 GSDALVNLWH 534
G+D V W+
Sbjct: 536 GNDKCVKFWN 545
Score = 101 (40.6 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 43/175 (24%), Positives = 76/175 (43%)
Query: 250 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 309
+E +A ++++D+SS S GH+ + L +V+GS D+S+
Sbjct: 89 QETNIIAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLK---FDKNGTRLVSGSSDSSI 145
Query: 310 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSS--------DHTIKVWSFDGLS 361
+WD + GH G + + + QN G + D+ + V S DGL
Sbjct: 146 IMWDLIGEVGMFKLKGHKGPITGLELLSEQQNTQQDGDNVDDVDDMDDYLVSV-SKDGLI 204
Query: 362 DDAEQPMNLKAKAVVA---AHGKDINSLAVAPN-DSLVCTGSQDRTACVWRLPDL 412
E LK++ + AH + ++ + P D L+ +G++D+ VW L DL
Sbjct: 205 KLWE----LKSQQCIETHLAHSNECWAMGINPTKDMLITSGNKDQVK-VWSL-DL 253
Score = 83 (34.3 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 34/174 (19%), Positives = 60/174 (34%)
Query: 308 SVRLWDSESRCCVGVGTGHMGAV----GAVAFSKKLQNFLVSGSSD---HTIKVWSFDGL 360
S +D E C GV T V S + L SG + IK
Sbjct: 4 SYNRYDQEK--CFGVITSQANIVWLPPSETQSSTSMGRALTSGLEEILIWDIKTGEIMNR 61
Query: 361 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG 420
D P + A V ++ L +++ G D + +W + ++ F G
Sbjct: 62 MSDGLTPGSSNASTTVPP--SPVSYLTYHQETNIIAAGYTDGSIKIWDISSNSVIINFEG 119
Query: 421 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 474
H I ++F +++ S D +I +W + + +GH + L+
Sbjct: 120 HNSSITQLKFDKNGTRLVSGSSDSSIIMWDLIGEVGMFKLKGHKGPITGLELLS 173
Score = 39 (18.8 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 636 LFQLFNIHPPTEIIEIKGISDVLEGLIPYTQR 667
LF + N EI I+ ++ G+ T+R
Sbjct: 295 LFSIQNADRTMEIFRIRSEDEIKRGITKRTKR 326
Score = 38 (18.4 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 570 AIQVAFELRRPHKLFELFASVCRKREAELQIEKALHALGKEEIRQLLEYVREWNTKPKL 628
+I +AF + + + + + R A Q++ AL L +LL+++ W K +
Sbjct: 829 SILLAFNMTASQYVLNVLSKI---RPA--QLDDALLVLPFSYSLKLLQFIEIWTNKENI 882
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 255 (94.8 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 277 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 335
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 295 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 346
Query: 336 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 395
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 347 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 394
Query: 396 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 395 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 452
Query: 456 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 506
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 453 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 501
Score = 203 (76.5 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 56/194 (28%), Positives = 90/194 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 394 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 441
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 442 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 499
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY---DKHEDKIWALAVGKKTE 519
H S L + + +VS AD VK+W ++TG+C+ T +KH+ + L K
Sbjct: 500 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-- 555
Query: 520 MFATGGSDALVNLW 533
T D V LW
Sbjct: 556 FVITSSDDGTVKLW 569
Score = 201 (75.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
LK+ V+ H + + + +V +GS D T VW + T GH G+WS +
Sbjct: 290 LKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 348
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D ++
Sbjct: 349 MR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATLR 404
Query: 490 LWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 537
+W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 405 VWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 450
Score = 176 (67.0 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 390 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 447
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 448 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 505
Query: 511 ALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + +G +D+ V +W T
Sbjct: 506 GMEL--KDNILVSGNADSTVKIWDIKT 530
Score = 172 (65.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
Q R WR +L S +GH I ++F +++ S D T+K+WS G CL+
Sbjct: 278 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR 335
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 518
T GHT V + R I+S D +K+W TGECI T H + + + +K
Sbjct: 336 TLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 393
Query: 519 EMFATGGSDALVNLWHDST 537
+ +G DA + +W T
Sbjct: 394 VV--SGSRDATLRVWDIET 410
Score = 170 (64.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 327 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 386
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 418 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 467
Query: 387 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 445
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 468 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 522
Query: 446 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
+KIW I G CL+T +G H S+V F +++ DG VKLW ++TGE I
Sbjct: 523 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFI 577
Score = 160 (61.4 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWDV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+
Sbjct: 480 DTSIRVWDVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQ 535
Query: 69 TL---DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
TL +KH S VT + + +I++ D V LWDL+
Sbjct: 536 TLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 572
Score = 154 (59.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD+
Sbjct: 354 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWDIE 409
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
+C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 410 TGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 457
Score = 153 (58.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 37/110 (33%), Positives = 55/110 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ GA D V VWD + C H +GH V S+ F D + SGS D ++RVWD+
Sbjct: 434 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVE 489
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
C+ TL H S + M + + L+S D V +WD++ C T+
Sbjct: 490 TGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTL 537
Score = 149 (57.5 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWD++ G C H GH V + + D + SG+ D V+VWD + C+
Sbjct: 400 DATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSGAYDFMVKVWDPETETCLH 455
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
TL H +RV S+ DG ++S D + +WD+ +C T+ ++
Sbjct: 456 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 501
Score = 144 (55.7 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 426 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 481
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 482 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 529
Query: 411 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 530 TGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIR 578
Score = 140 (54.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 71/313 (22%), Positives = 135/313 (43%)
Query: 53 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
D R +L + K + D H +T + G+ ++S D + +W C T
Sbjct: 282 DTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 336
Query: 113 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 169
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 337 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 391
Query: 170 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 225
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 392 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 448
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 449 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 503
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 342
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 504 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NF 556
Query: 343 LVSGSSDHTIKVW 355
+++ S D T+K+W
Sbjct: 557 VITSSDDGTVKLW 569
Score = 129 (50.5 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+D L VW G C GH G V S + ++ SGS D T++VW+
Sbjct: 314 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN----IIISGSTDRTLKVWNAE 369
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+C+ TL H S V M + ++S RD + +WD+ C
Sbjct: 370 TGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQC 413
Score = 97 (39.2 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 27 KGHKG-VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
KGH V++ + F + + SGSDD T++VW + KC+ TL H V S + +
Sbjct: 297 KGHDDHVITCLQFCGNR----IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 352
Query: 86 GSTLISAGRDKVVNLWDLRDYSC 108
+IS D+ + +W+ C
Sbjct: 353 --IIISGSTDRTLKVWNAETGEC 373
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 252 (93.8 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 67/253 (26%), Positives = 113/253 (44%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L+ TGS D R+W + +G H G + A+ ++KK NF++S D T +W D
Sbjct: 239 LLATGSYDGFARIWTKDGNLASTLGQ-HKGPIFALKWNKK-GNFILSAGVDKTTIIW--D 294
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPDLVSVV 416
+ +A+Q + + + N+ A D VC QDR P +
Sbjct: 295 AHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDR-------P----IK 343
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
TF+GH + ++++ P ++ + S D T+KIWS+ SC+ + H + + G
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTG 403
Query: 477 ------------AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 524
A + S D V+LW V G CI T KH++ ++++A A+G
Sbjct: 404 PGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASG 463
Query: 525 GSDALVNLWHDST 537
D V++W+ T
Sbjct: 464 SFDKCVHIWNTQT 476
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 50/214 (23%), Positives = 90/214 (42%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLK----AKAVVAAHG 380
GH V A++ + + L SGS D T ++W+ S + L+
Sbjct: 167 GHESEVFICAWNP-VSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSN 225
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLP-DLVSVVTFRGHKRGIWSVEFSPVDQVVIT 439
KD+ SL +L+ TGS D A +W +L S T HK I++++++ +++
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKWNKKGNFILS 283
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
A DKT IW G + F H++ L + + SC D + + + I
Sbjct: 284 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNT-FASCSTDMCIHVCKLGQDRPI 342
Query: 500 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ H +++ A+ + A+ D + +W
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 64/282 (22%), Positives = 122/282 (43%)
Query: 249 GEEEQYLAVATN-IEQVQVY-DLS-SMSCSYVLAGH-SEIVLCLDTCALSSGKILIVTGS 304
GEE +A N + ++V D+ + + VL GH SE+ +C A + L+ +GS
Sbjct: 133 GEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFIC----AWNPVSDLLASGS 188
Query: 305 KDNSVRLWD-SES----------RCCVGVGTGHMGA---VGAVAFSKKLQNFLVSGSSDH 350
D++ R+W+ SE+ R C+ G + + V ++ ++ + L +GS D
Sbjct: 189 GDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSE-GTLLATGSYDG 247
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
++W+ DG NL + + H I +L + + + D+T +W
Sbjct: 248 FARIWTKDG---------NLAS--TLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAH 296
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
+ F H V++ + + S D I + + +KTF+GHT+ V
Sbjct: 297 TGEAKQQFPFHSAPALDVDWQS-NNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
+ G + SC D +K+W+++ C+ H +I+ +
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTI 397
Score = 149 (57.5 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 40/169 (23%), Positives = 78/169 (46%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD---- 434
H ++N++ P +L+ + S D T +W + V + H + I+++++SP
Sbjct: 348 HTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTN 407
Query: 435 ----QVVI----TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADG 486
+++ +AS D T+++W + G C+ T H V +F G + S D
Sbjct: 408 NPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDK 467
Query: 487 LVKLWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSDALVNL 532
V +W +TG + +Y + I+ + A G K A+ GS +++L
Sbjct: 468 CVHIWNTQTGALVHSY-RGTGGIFEVCWNAAGDKVGASASDGSVCVLDL 515
Score = 130 (50.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 35/138 (25%), Positives = 62/138 (44%)
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CLKTFEG-- 462
V RGH+ ++ ++PV ++ + SGD T +IW++S+ S C++ EG
Sbjct: 163 VVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIR--EGGQ 220
Query: 463 ---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
V + + G + + DG ++WT + G +T +H+ I+AL KK
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGN 279
Query: 520 MFATGGSDALVNLWHDST 537
+ G D +W T
Sbjct: 280 FILSAGVDKTTIIWDAHT 297
Score = 129 (50.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 31/104 (29%), Positives = 52/104 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHP------DTDKSLLFSGSD----DATVRV 58
D + +W + C H + H + +I + P + + +L+ + D D+TVR+
Sbjct: 370 DMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRL 429
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
WD+ C+ TL KH V S+A + DG L S DK V++W+
Sbjct: 430 WDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 473
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 52/201 (25%), Positives = 86/201 (42%)
Query: 347 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 406
+++HT + DG D E P N KA V+ H ++ A P L+ +GS D TA +
Sbjct: 142 ANNHT-DMMEVDG---DVEIPPN-KA-VVLRGHESEVFICAWNPVSDLLASGSGDSTARI 195
Query: 407 WRLPD--------LVSVVTFR--GH----KRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
W L + LV R G + + S++++ ++ T S D +IW+
Sbjct: 196 WNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-K 254
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
DG+ T H + + +G I+S G D +W TGE + H AL
Sbjct: 255 DGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAP--AL 312
Query: 513 AVG-KKTEMFATGGSDALVNL 532
V + FA+ +D +++
Sbjct: 313 DVDWQSNNTFASCSTDMCIHV 333
Score = 85 (35.0 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+++ +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 234 NSEGTLLATGSYDGFARIWTKDGN-LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTII 292
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 293 WDAHTGEAKQQFP 305
Score = 73 (30.8 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 25/89 (28%), Positives = 40/89 (44%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD---KHFSR------- 76
+GH+ V ++P +D LL SGS D+T R+W+L + +H R
Sbjct: 166 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 77 ----VTSMAITSDGSTLISAGRDKVVNLW 101
VTS+ S+G+ L + D +W
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIW 252
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 255 (94.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 277 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 335
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 297 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 348
Query: 336 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 395
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 349 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 396
Query: 396 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 397 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 454
Query: 456 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 506
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 455 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 503
Score = 202 (76.2 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 56/194 (28%), Positives = 89/194 (45%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 396 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 443
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 444 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 501
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD---KHEDKIWALAVGKKTE 519
H S L + + +VS AD VK+W ++TG+C+ T KH+ + L K
Sbjct: 502 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN-- 557
Query: 520 MFATGGSDALVNLW 533
T D V LW
Sbjct: 558 FVITSSDDGTVKLW 571
Score = 198 (74.8 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 47/169 (27%), Positives = 82/169 (48%)
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
L++ V+ H + + + +V +GS D T VW + T GH G+WS +
Sbjct: 292 LRSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 350
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D ++
Sbjct: 351 MR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATLR 406
Query: 490 LWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 537
+W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 407 VWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 452
Score = 176 (67.0 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 392 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 449
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 450 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 507
Query: 511 ALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + +G +D+ V +W T
Sbjct: 508 GMEL--KDNILVSGNADSTVKIWDIKT 532
Score = 170 (64.9 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 327 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 386
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 420 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 469
Query: 387 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 445
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 470 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 524
Query: 446 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
+KIW I G CL+T +G H S+V F +++ DG VKLW ++TGE I
Sbjct: 525 VKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFI 579
Score = 159 (61.0 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 34/99 (34%), Positives = 55/99 (55%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWDV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+
Sbjct: 482 DTSIRVWDVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQ 537
Query: 69 TLD---KHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
TL KH S VT + + +I++ D V LWDL+
Sbjct: 538 TLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 574
Score = 154 (59.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD+
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWDIE 411
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
+C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 412 TGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 459
Score = 154 (59.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 39/122 (31%), Positives = 58/122 (47%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ GA D V VWD + C H +GH V S+ F D + SGS D ++RVWD+
Sbjct: 436 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVE 491
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV--PTYEMVEA 120
C+ TL H S + M + + L+S D V +WD++ C T+ P+
Sbjct: 492 TGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAV 549
Query: 121 VC 122
C
Sbjct: 550 TC 551
Score = 149 (57.5 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWD++ G C H GH V + + D + SG+ D V+VWD + C+
Sbjct: 402 DATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSGAYDFMVKVWDPETETCLH 457
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
TL H +RV S+ DG ++S D + +WD+ +C T+ ++
Sbjct: 458 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 503
Score = 144 (55.7 bits), Expect = 8.7e-15, Sum P(2) = 8.7e-15
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 428 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 483
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 484 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 531
Query: 411 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 532 TGQCLQTLQGPSKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIR 580
Score = 140 (54.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 71/313 (22%), Positives = 135/313 (43%)
Query: 53 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
D R +L + K + D H +T + G+ ++S D + +W C T
Sbjct: 284 DTNWRRGELRSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 338
Query: 113 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 169
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 339 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 393
Query: 170 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 225
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 394 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 450
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 451 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 505
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 342
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 506 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK---NF 558
Query: 343 LVSGSSDHTIKVW 355
+++ S D T+K+W
Sbjct: 559 VITSSDDGTVKLW 571
Score = 129 (50.5 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+D L VW G C GH G V S + ++ SGS D T++VW+
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN----IIISGSTDRTLKVWNAE 371
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+C+ TL H S V M + ++S RD + +WD+ C
Sbjct: 372 TGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQC 415
Score = 97 (39.2 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 27 KGHKG-VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
KGH V++ + F + + SGSDD T++VW + KC+ TL H V S + +
Sbjct: 299 KGHDDHVITCLQFCGNR----IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 354
Query: 86 GSTLISAGRDKVVNLWDLRDYSC 108
+IS D+ + +W+ C
Sbjct: 355 --IIISGSTDRTLKVWNAETGEC 375
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 258 (95.9 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 72/274 (26%), Positives = 137/274 (50%)
Query: 264 VQVYDL---SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCV 320
V+V+DL +++ + L GH+ L + + A+SS I + S D+++ LWD+ S
Sbjct: 64 VKVWDLQEDNTLKLRHKLKGHA---LGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKK 120
Query: 321 GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG 380
+ + + V FS +++SG +D I ++S + + AEQ ++ A +G
Sbjct: 121 HLLSFGPVDLWTVQFSP-CNKYVISGLNDGKISMYSVE--TGKAEQTLD-------AQNG 170
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 440
K S+A +P+ + +G+ D ++ + V T GH + S+ FSP Q+++TA
Sbjct: 171 KYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTA 230
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 500
S D +K++ ++ + T GH S VL +F G S +D VK+W +C+
Sbjct: 231 SDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLH 290
Query: 501 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 534
T+ +H D++W + + A+ D +N+++
Sbjct: 291 TFAEHTDQVWGVRYSPGNDKVASASEDKSLNIYY 324
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 58/244 (23%), Positives = 107/244 (43%)
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVG---TGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
K +VTG D+ V++WD + + + GH V +VA S Q + S S D T+
Sbjct: 52 KDFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQT-IASSSLDSTMC 110
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W D S D K +++ D+ ++ +P + V +G D ++ +
Sbjct: 111 LW--DARSGDK--------KHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGK 160
Query: 414 SVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 472
+ T + S+ +SP + + + + D I I+ ++ G ++T EGH V F
Sbjct: 161 AEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCF 220
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 532
+++ DG +KL+ V + + T H + +A + + FA+ SD V +
Sbjct: 221 SPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKI 280
Query: 533 WHDS 536
W S
Sbjct: 281 WDTS 284
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/106 (31%), Positives = 52/106 (49%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
+ GA D + ++DV G +GH V S+ F P++ LL + SDD ++++D+
Sbjct: 185 IASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQ--LLLTASDDGHMKLYDVT 242
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
V TL H S V +A + DG S+ D V +WD + C
Sbjct: 243 HSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKC 288
Score = 138 (53.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 65/283 (22%), Positives = 123/283 (43%)
Query: 44 KSLLFSGSDDATVRVWDLLAKKCVATLDK---HFSRVTSMAITSDGSTLISAGRDKVVNL 100
K L +G D V+VWDL + K H V S+A++SDG T+ S+ D + L
Sbjct: 52 KDFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCL 111
Query: 101 WDLRDYSCKLTVPTYEMVEA-VCAIPPGSAF------DSFLSSYNQQTIKKKRRSLEIHF 153
WD R K + ++ V+ P + + D +S Y+ +T K ++L+
Sbjct: 112 WDARSGDKKHLL-SFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVET-GKAEQTLDAQN 169
Query: 154 ITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA-ATVLPSNQGLLCVTADQ 212
G+ + ++ D + + F++ K T +P LC + +
Sbjct: 170 ---GKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRS--LCFSPNS 224
Query: 213 QLLLYTTVEVPEKKMELILSK---RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDL 269
QLLL + + K ++ S L G+ +L + F E+ ++ A +++ V+++D
Sbjct: 225 QLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAF-SEDGKHFASSSSDNSVKIWDT 283
Query: 270 SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
S C + A H++ V + S G + + S+D S+ ++
Sbjct: 284 SERKCLHTFAEHTDQVWGV---RYSPGNDKVASASEDKSLNIY 323
Score = 132 (51.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 42/158 (26%), Positives = 76/158 (48%)
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
+Y+A + ++D+++ L GH+ V L C S L++T S D ++L+
Sbjct: 183 KYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSL--C-FSPNSQLLLTASDDGHMKLY 239
Query: 313 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 372
D VG +GH V VAFS+ ++F S SSD+++K+W D +E+ K
Sbjct: 240 DVTHSDVVGTLSGHASWVLCVAFSEDGKHF-ASSSSDNSVKIW------DTSER----KC 288
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
A H + + +P + V + S+D++ ++ P
Sbjct: 289 LHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIYYCP 326
Score = 70 (29.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 2 FALLEGADRKVLVWDV--DGGF-CTHYFKGHK-GVVSSILFHPDTDKSLLFSGSDDATVR 57
F + G D V VWD+ D H KGH GVVS + +D + S S D+T+
Sbjct: 54 FLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAV---SSDGQTIASSSLDSTMC 110
Query: 58 VWD 60
+WD
Sbjct: 111 LWD 113
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 268 (99.4 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 69/246 (28%), Positives = 114/246 (46%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
+L GH V A SSG +++ S+D S+R WD S + GH V + S
Sbjct: 337 ILRGHCGPVYSTRFLADSSG---LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS 393
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
+ SGS D T ++WSFD P+ + A H D++ + PN + +
Sbjct: 394 P-YSLYFASGSHDRTARLWSFD-----RTYPLR-----IYAGHLADVDCVKFHPNSNYLA 442
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
TGS D+T +W SV F GH+ + S+ FSP + + +A D+ +K+W ++ G+
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 516
K GHT ++ +F I S D V++W +R C A D ++ + G+
Sbjct: 503 YKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQ 562
Query: 517 KTEMFA 522
+ + +
Sbjct: 563 MSNVLS 568
Score = 237 (88.5 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 61/236 (25%), Positives = 115/236 (48%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K L G+ + +FL + L+ + ++ ++ +DL S + + + GH+ V LD
Sbjct: 336 KILRGHCGPVYSTRFLADSSGLLSCSEDMS-IRYWDLGSFTNTVLYQGHAYPVWDLD--- 391
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+S + +GS D + RLW + + + GH+ V V F N+L +GS+D T+
Sbjct: 392 ISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPN-SNYLATGSTDKTV 450
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
++WS A+Q +++ + H + SLA +PN + + +D+ +W L
Sbjct: 451 RLWS-------AQQGNSVR---LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 468
RGH I S+ FSP ++ +AS D ++++W I + C +G +S ++
Sbjct: 501 TLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELV 556
Score = 230 (86.0 bits), Expect = 7.5e-17, Sum P(2) = 7.5e-17
Identities = 56/209 (26%), Positives = 89/209 (42%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH G V + F L+S S D +I+ W ++ + H +
Sbjct: 340 GHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNTV----------LYQGHAYPVW 388
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
L ++P +GS DRTA +W + + GH + V+F P + T S DK
Sbjct: 389 DLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 448
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
T+++WS G+ ++ F GH VL +F G + S G D +KLW + +G
Sbjct: 449 TVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 508
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLW 533
H D I +L + + A+ D V +W
Sbjct: 509 HTDNITSLTFSPDSGLIASASMDNSVRVW 537
Score = 181 (68.8 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 39/172 (22%), Positives = 74/172 (43%)
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGH 421
DD + + K ++ H + S + S + + S+D + W L + V ++GH
Sbjct: 325 DDEDDNAGTEMK-ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 383
Query: 422 KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVS 481
+W ++ SP + S D+T ++WS L+ + GH + V F + +
Sbjct: 384 AYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLAT 443
Query: 482 CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
D V+LW+ + G + + H + +LA + A+ G D + LW
Sbjct: 444 GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
Score = 153 (58.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 31/100 (31%), Positives = 48/100 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +W G F GH+G V S+ F P+ L S +D +++WDL +
Sbjct: 447 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG--KYLASAGEDQRLKLWDLASGTLYK 504
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
L H +TS+ + D + SA D V +WD+R+ C
Sbjct: 505 ELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYC 544
Score = 149 (57.5 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 33/95 (34%), Positives = 47/95 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W D + + GH V + FHP+++ L +GS D TVR+W V
Sbjct: 405 DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN--YLATGSTDKTVRLWSAQQGNSVR 462
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H V S+A + +G L SAG D+ + LWDL
Sbjct: 463 LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDL 497
Score = 117 (46.2 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 41/116 (35%), Positives = 60/116 (51%)
Query: 232 SKRL-VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
S RL G+ +L L F +YLA A ++++++DL+S + L GH++ + L T
Sbjct: 460 SVRLFTGHRGPVLSLAF-SPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSL-T 517
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCC-----------VGVGTGHMGAVGAVAF 335
+ SG LI + S DNSVR+WD + C VGV TG M V +V F
Sbjct: 518 FSPDSG--LIASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQF 571
Score = 84 (34.6 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 36/148 (24%), Positives = 57/148 (38%)
Query: 16 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFS 75
D + G +GH G V S F D+ S L S S+D ++R WDL + H
Sbjct: 328 DDNAGTEMKILRGHCGPVYSTRFLADS--SGLLSCSEDMSIRYWDLGSFTNTVLYQGHAY 385
Query: 76 RVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGSAFDSFL 134
V + I+ S D+ LW D + L + + + C P S + +
Sbjct: 386 PVWDLDISPYSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATG 444
Query: 135 SSYNQQTIKKKRRSLEIHFITVGERGIV 162
S+ + ++ + T G RG V
Sbjct: 445 STDKTVRLWSAQQGNSVRLFT-GHRGPV 471
Score = 58 (25.5 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 65
C + F + ++++ PD+ LL +G D++ +++W L +KK
Sbjct: 260 CFYAFYNTEQLLNTAEISPDS--KLLAAGFDNSCIKLWSLRSKK 301
Score = 45 (20.9 bits), Expect = 9.6e-20, Sum P(2) = 9.6e-20
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 76 RVTSMAITSDGSTLISAGRDK-VVNLWDLRDYSCK 109
++ + A S S L++AG D + LW LR K
Sbjct: 269 QLLNTAEISPDSKLLAAGFDNSCIKLWSLRSKKLK 303
Score = 45 (20.9 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 274 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 317
C Y ++ L+T +S L+ G ++ ++LW S+
Sbjct: 260 CFYAFYNTEQL---LNTAEISPDSKLLAAGFDNSCIKLWSLRSK 300
Score = 38 (18.4 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 338 KLQNFLVSGSSDHTIKV 354
+L+NFL S H+ +V
Sbjct: 76 RLRNFLTDSDSQHSHEV 92
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 287 (106.1 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 70/240 (29%), Positives = 127/240 (52%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV+G +DN++++WD + C + +GH G+V + + ++ ++SGSSD T++VW
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRV---IISGSSDATVRVW---- 287
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV--VT 417
D E +K + H + + L A + ++ T S+DR+ VW D+VS +T
Sbjct: 288 ---DVETGECIKT---LIHHCEAVLHLRFA--NGIMVTCSKDRSIAVW---DMVSPRDIT 336
Query: 418 FR----GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
R GH+ + V+F D+ +++ASGD+TIK+WS+ ++T GH + A
Sbjct: 337 IRRVLVGHRAAVNVVDFD--DRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGI--ACLQ 392
Query: 474 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
RG +VS +D ++LW + +G C+ + HE+ + + +K +G D + +W
Sbjct: 393 YRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--IVSGAYDGKIKVW 450
Score = 251 (93.4 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 63/196 (32%), Positives = 102/196 (52%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+I++GS D +VR+WD E+ C+ H AV + F+ + +V+ S D +I VW
Sbjct: 274 VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGI---MVTCSKDRSIAVW--- 327
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D P ++ + V+ H +N V +D + + S DRT VW + L V T
Sbjct: 328 ----DMVSPRDITIRRVLVGHRAAVN--VVDFDDRYIVSASGDRTIKVWSMDTLEFVRTL 381
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH+RGI +++ ++V++ S D TI++W I G CL+ EGH V F + +
Sbjct: 382 AGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEK--R 437
Query: 479 IVSCGADGLVKLWTVR 494
IVS DG +K+W ++
Sbjct: 438 IVSGAYDGKIKVWDLQ 453
Score = 227 (85.0 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 81/307 (26%), Positives = 141/307 (45%)
Query: 201 SNQGLLCVTADQQLLLY----TTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLA 256
+++G+ C+ D ++ T+++ ++K + S+ L G+ +L L++ + + +
Sbjct: 221 NSKGVYCLQYDDDKIVSGLRDNTIKIWDRK-DYSCSRILSGHTGSVLCLQY---DNRVII 276
Query: 257 VATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES 316
++ V+V+D+ + C L H E VL L ++G ++VT SKD S+ +WD S
Sbjct: 277 SGSSDATVRVWDVETGECIKTLIHHCEAVLHL---RFANG--IMVTCSKDRSIAVWDMVS 331
Query: 317 RCCVGVG---TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 373
+ + GH AV V F + ++VS S D TIKVWS D L+
Sbjct: 332 PRDITIRRVLVGHRAAVNVVDFDDR---YIVSASGDRTIKVWSMD----------TLEFV 378
Query: 374 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 433
+A H + I L LV +GS D T +W + V + GH+ + + F
Sbjct: 379 RTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFD-- 434
Query: 434 DQVVITASGDKTIKIW---------SISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA 484
++ +++ + D IK+W ++S CL + HT V R F QIVS
Sbjct: 435 EKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQF--DDFQIVSSSH 492
Query: 485 DGLVKLW 491
D + +W
Sbjct: 493 DDTILIW 499
Score = 146 (56.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 55/214 (25%), Positives = 95/214 (44%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C+ GH G V + + D ++ SGS DATVRVWD+ +C+
Sbjct: 241 DNTIKIWDRKDYSCSRILSGHTGSVLCLQY----DNRVIISGSSDATVRVWDVETGECIK 296
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL---RDYSCKLTVPTYEMVEAVCAIP 125
TL H V + + +++ +D+ + +WD+ RD + + + + AV +
Sbjct: 297 TLIHHCEAVLHLRFAN--GIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRA--AVNVVD 352
Query: 126 PGSAFDSFLSSYNQQTIKK-KRRSLEIHFITVGER-GIVRMWNADSACLYEQKSSDVTIS 183
+ +S+ +TIK +LE G R GI + L SSD TI
Sbjct: 353 FDDRY--IVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR--LVVSGSSDNTI- 407
Query: 184 FEMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D G VL ++ L+ C+ D++ ++
Sbjct: 408 -RLWDIHSG-VCLRVLEGHEELVRCIRFDEKRIV 439
Score = 136 (52.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 69/294 (23%), Positives = 131/294 (44%)
Query: 85 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 138
D ++S RD + +WD +DYSC + + +C I GS+ D+ + ++
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTG-SVLCLQYDNRVIISGSS-DATVRVWD 288
Query: 139 QQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATV 198
+T + ++L IH ++ + A+ + K + + ++M S R T V
Sbjct: 289 VET-GECIKTL-IHHC----EAVLHLRFANGIMVTCSKDRSIAV-WDMV-SPRDITIRRV 340
Query: 199 LPSNQGLL-CVTADQQLLLYTTVEVPEK--KMELI-LSKRLVGYNEEILDLKFLGEEEQY 254
L ++ + V D + ++ + + K M+ + + L G+ I L++ G
Sbjct: 341 LVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR---- 396
Query: 255 LAVATNIEQ-VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
L V+ + + ++++D+ S C VL GH E+V C+ +I V+G+ D +++WD
Sbjct: 397 LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCI---RFDEKRI--VSGAYDGKIKVWD 451
Query: 314 SE---------SRCCVGVGTGHMGAVGAVAFSKKLQNF-LVSGSSDHTIKVWSF 357
+ S C+ H G V F + +F +VS S D TI +W F
Sbjct: 452 LQAALDPRALSSEICLCSLVQHTGRV----FRLQFDDFQIVSSSHDDTILIWDF 501
Score = 135 (52.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 66/287 (22%), Positives = 126/287 (43%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
D DK + SG D T+++WD C L H V + + D +IS D V +
Sbjct: 231 DDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISGSSDATVRV 286
Query: 101 WDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTI--KKKRRSLEIHFITVGE 158
WD+ C T+ + EAV + + S + R + I + VG
Sbjct: 287 WDVETGECIKTLIHH--CEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGH 344
Query: 159 RGIVRMWNADSACLYEQKSSDVTIS-FEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLY 217
R V + + D + S D TI + MD + F T+ +G+ C+ +L++
Sbjct: 345 RAAVNVVDFDDRYIVSA-SGDRTIKVWSMDTLE--FVR-TLAGHRRGIACLQYRGRLVVS 400
Query: 218 TTVEVPEKKMEL---ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC 274
+ + + ++ + + L G+ E + ++F +E++ ++ A + +++V+DL +
Sbjct: 401 GSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYD-GKIKVWDLQAALD 457
Query: 275 SYVLAGHSEIVLCLDTCALSSGKIL--------IVTGSKDNSVRLWD 313
L+ SEI LC + +G++ IV+ S D+++ +WD
Sbjct: 458 PRALS--SEICLC--SLVQHTGRVFRLQFDDFQIVSSSHDDTILIWD 500
Score = 134 (52.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 64/282 (22%), Positives = 128/282 (45%)
Query: 190 KRGFTAATVLPSNQG-LLCVTADQQLLLY----TTVEVPEKKM-ELILSKRLVGYNEEIL 243
++ ++ + +L + G +LC+ D ++++ TV V + + E I K L+ + E +L
Sbjct: 249 RKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECI--KTLIHHCEAVL 306
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSS---MSCSYVLAGHSEIVLCLDTCALSSGKILI 300
L+F + + + V+D+ S ++ VL GH V +D I
Sbjct: 307 HLRFANG---IMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF-----DDRYI 358
Query: 301 VTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 360
V+ S D ++++W ++ V GH + + + +L +VSGSSD+TI++W
Sbjct: 359 VSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRL---VVSGSSDNTIRLW----- 410
Query: 361 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL-----PDLVS- 414
D + L+ V+ H + + + ++ + +G+ D VW L P +S
Sbjct: 411 --DIHSGVCLR---VLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWDLQAALDPRALSS 463
Query: 415 ---VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
+ + H ++ ++F D ++++S D TI IW D
Sbjct: 464 EICLCSLVQHTGRVFRLQFD--DFQIVSSSHDDTILIWDFLD 503
Score = 128 (50.1 bits), Expect = 0.00017, P = 0.00017
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA---- 63
+D + +WD+ G C +GH+ +V I F D+ + SG+ D ++VWDL A
Sbjct: 403 SDNTIRLWDIHSGVCLRVLEGHEELVRCIRF----DEKRIVSGAYDGKIKVWDLQAALDP 458
Query: 64 -----KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
+ C+ +L +H RV + D ++S+ D + +WD D
Sbjct: 459 RALSSEICLCSLVQHTGRVFRLQF--DDFQIVSSSHDDTILIWDFLD 503
Score = 40 (19.1 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 25 YFKGHKGVVSSIL 37
Y +GH+G++ +L
Sbjct: 33 YLQGHEGLIEEVL 45
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 287 (106.1 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 70/240 (29%), Positives = 127/240 (52%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV+G +DN++++WD + C + +GH G+V + + ++ ++SGSSD T++VW
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRV---IISGSSDATVRVW---- 287
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV--VT 417
D E +K + H + + L A + ++ T S+DR+ VW D+VS +T
Sbjct: 288 ---DVETGECIKT---LIHHCEAVLHLRFA--NGIMVTCSKDRSIAVW---DMVSPRDIT 336
Query: 418 FR----GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
R GH+ + V+F D+ +++ASGD+TIK+WS+ ++T GH + A
Sbjct: 337 IRRVLVGHRAAVNVVDFD--DRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGI--ACLQ 392
Query: 474 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
RG +VS +D ++LW + +G C+ + HE+ + + +K +G D + +W
Sbjct: 393 YRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--IVSGAYDGKIKVW 450
Score = 251 (93.4 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 63/196 (32%), Positives = 102/196 (52%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+I++GS D +VR+WD E+ C+ H AV + F+ + +V+ S D +I VW
Sbjct: 274 VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGI---MVTCSKDRSIAVW--- 327
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D P ++ + V+ H +N V +D + + S DRT VW + L V T
Sbjct: 328 ----DMVSPRDITIRRVLVGHRAAVN--VVDFDDRYIVSASGDRTIKVWSMDTLEFVRTL 381
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH+RGI +++ ++V++ S D TI++W I G CL+ EGH V F + +
Sbjct: 382 AGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEK--R 437
Query: 479 IVSCGADGLVKLWTVR 494
IVS DG +K+W ++
Sbjct: 438 IVSGAYDGKIKVWDLQ 453
Score = 227 (85.0 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 81/307 (26%), Positives = 141/307 (45%)
Query: 201 SNQGLLCVTADQQLLLY----TTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLA 256
+++G+ C+ D ++ T+++ ++K + S+ L G+ +L L++ + + +
Sbjct: 221 NSKGVYCLQYDDDKIVSGLRDNTIKIWDRK-DYSCSRILSGHTGSVLCLQY---DNRVII 276
Query: 257 VATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES 316
++ V+V+D+ + C L H E VL L ++G ++VT SKD S+ +WD S
Sbjct: 277 SGSSDATVRVWDVETGECIKTLIHHCEAVLHL---RFANG--IMVTCSKDRSIAVWDMVS 331
Query: 317 RCCVGVG---TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 373
+ + GH AV V F + ++VS S D TIKVWS D L+
Sbjct: 332 PRDITIRRVLVGHRAAVNVVDFDDR---YIVSASGDRTIKVWSMD----------TLEFV 378
Query: 374 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 433
+A H + I L LV +GS D T +W + V + GH+ + + F
Sbjct: 379 RTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFD-- 434
Query: 434 DQVVITASGDKTIKIW---------SISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA 484
++ +++ + D IK+W ++S CL + HT V R F QIVS
Sbjct: 435 EKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQF--DDFQIVSSSH 492
Query: 485 DGLVKLW 491
D + +W
Sbjct: 493 DDTILIW 499
Score = 146 (56.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 55/214 (25%), Positives = 95/214 (44%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C+ GH G V + + D ++ SGS DATVRVWD+ +C+
Sbjct: 241 DNTIKIWDRKDYSCSRILSGHTGSVLCLQY----DNRVIISGSSDATVRVWDVETGECIK 296
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL---RDYSCKLTVPTYEMVEAVCAIP 125
TL H V + + +++ +D+ + +WD+ RD + + + + AV +
Sbjct: 297 TLIHHCEAVLHLRFAN--GIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRA--AVNVVD 352
Query: 126 PGSAFDSFLSSYNQQTIKK-KRRSLEIHFITVGER-GIVRMWNADSACLYEQKSSDVTIS 183
+ +S+ +TIK +LE G R GI + L SSD TI
Sbjct: 353 FDDRY--IVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR--LVVSGSSDNTI- 407
Query: 184 FEMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D G VL ++ L+ C+ D++ ++
Sbjct: 408 -RLWDIHSG-VCLRVLEGHEELVRCIRFDEKRIV 439
Score = 136 (52.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 69/294 (23%), Positives = 131/294 (44%)
Query: 85 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 138
D ++S RD + +WD +DYSC + + +C I GS+ D+ + ++
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTG-SVLCLQYDNRVIISGSS-DATVRVWD 288
Query: 139 QQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATV 198
+T + ++L IH ++ + A+ + K + + ++M S R T V
Sbjct: 289 VET-GECIKTL-IHHC----EAVLHLRFANGIMVTCSKDRSIAV-WDMV-SPRDITIRRV 340
Query: 199 LPSNQGLL-CVTADQQLLLYTTVEVPEK--KMELI-LSKRLVGYNEEILDLKFLGEEEQY 254
L ++ + V D + ++ + + K M+ + + L G+ I L++ G
Sbjct: 341 LVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR---- 396
Query: 255 LAVATNIEQ-VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
L V+ + + ++++D+ S C VL GH E+V C+ +I V+G+ D +++WD
Sbjct: 397 LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCI---RFDEKRI--VSGAYDGKIKVWD 451
Query: 314 SE---------SRCCVGVGTGHMGAVGAVAFSKKLQNF-LVSGSSDHTIKVWSF 357
+ S C+ H G V F + +F +VS S D TI +W F
Sbjct: 452 LQAALDPRALSSEICLCSLVQHTGRV----FRLQFDDFQIVSSSHDDTILIWDF 501
Score = 135 (52.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 66/287 (22%), Positives = 126/287 (43%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
D DK + SG D T+++WD C L H V + + D +IS D V +
Sbjct: 231 DDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISGSSDATVRV 286
Query: 101 WDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTI--KKKRRSLEIHFITVGE 158
WD+ C T+ + EAV + + S + R + I + VG
Sbjct: 287 WDVETGECIKTLIHH--CEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGH 344
Query: 159 RGIVRMWNADSACLYEQKSSDVTIS-FEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLY 217
R V + + D + S D TI + MD + F T+ +G+ C+ +L++
Sbjct: 345 RAAVNVVDFDDRYIVSA-SGDRTIKVWSMDTLE--FVR-TLAGHRRGIACLQYRGRLVVS 400
Query: 218 TTVEVPEKKMEL---ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC 274
+ + + ++ + + L G+ E + ++F +E++ ++ A + +++V+DL +
Sbjct: 401 GSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYD-GKIKVWDLQAALD 457
Query: 275 SYVLAGHSEIVLCLDTCALSSGKIL--------IVTGSKDNSVRLWD 313
L+ SEI LC + +G++ IV+ S D+++ +WD
Sbjct: 458 PRALS--SEICLC--SLVQHTGRVFRLQFDDFQIVSSSHDDTILIWD 500
Score = 134 (52.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 64/282 (22%), Positives = 128/282 (45%)
Query: 190 KRGFTAATVLPSNQG-LLCVTADQQLLLY----TTVEVPEKKM-ELILSKRLVGYNEEIL 243
++ ++ + +L + G +LC+ D ++++ TV V + + E I K L+ + E +L
Sbjct: 249 RKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECI--KTLIHHCEAVL 306
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSS---MSCSYVLAGHSEIVLCLDTCALSSGKILI 300
L+F + + + V+D+ S ++ VL GH V +D I
Sbjct: 307 HLRFANG---IMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF-----DDRYI 358
Query: 301 VTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 360
V+ S D ++++W ++ V GH + + + +L +VSGSSD+TI++W
Sbjct: 359 VSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRL---VVSGSSDNTIRLW----- 410
Query: 361 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL-----PDLVS- 414
D + L+ V+ H + + + ++ + +G+ D VW L P +S
Sbjct: 411 --DIHSGVCLR---VLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWDLQAALDPRALSS 463
Query: 415 ---VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
+ + H ++ ++F D ++++S D TI IW D
Sbjct: 464 EICLCSLVQHTGRVFRLQFD--DFQIVSSSHDDTILIWDFLD 503
Score = 128 (50.1 bits), Expect = 0.00017, P = 0.00017
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA---- 63
+D + +WD+ G C +GH+ +V I F D+ + SG+ D ++VWDL A
Sbjct: 403 SDNTIRLWDIHSGVCLRVLEGHEELVRCIRF----DEKRIVSGAYDGKIKVWDLQAALDP 458
Query: 64 -----KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
+ C+ +L +H RV + D ++S+ D + +WD D
Sbjct: 459 RALSSEICLCSLVQHTGRVFRLQF--DDFQIVSSSHDDTILIWDFLD 503
Score = 40 (19.1 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 25 YFKGHKGVVSSIL 37
Y +GH+G++ +L
Sbjct: 33 YLQGHEGLIEEVL 45
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 274 (101.5 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 54/197 (27%), Positives = 99/197 (50%)
Query: 343 LVSGSSDHTIKVWSFDG------LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
+ +G D IK+WS DG L D +P K + H + ++ +P++ +
Sbjct: 476 VAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLI--GHSGPVYGVSFSPDNKYLL 533
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
+ S+D+T +W L ++V+++GH + +W V+FSP+ +TAS D+T ++W+
Sbjct: 534 SCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYP 593
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 516
L+ F GH + V F + + +D ++W V TG C+ + H + + LAV
Sbjct: 594 LRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSP 653
Query: 517 KTEMFATGGSDALVNLW 533
A+GG D ++ +W
Sbjct: 654 DGRWLASGGEDGIICVW 670
Score = 218 (81.8 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 63/218 (28%), Positives = 103/218 (47%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
L GHS V + + S +++ S+D +VRLW ++ + GH V V FS
Sbjct: 513 LIGHSGPVYGV---SFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSP 569
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 397
L ++ V+ S D T ++W+ D + P+ + A H D++ + PN + V T
Sbjct: 570 -LGHYFVTASHDQTARLWATDHI-----YPLR-----IFAGHINDVDCVEFHPNSNYVFT 618
Query: 398 GSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCL 457
GS D+T +W + V F GH + + SP + + + D I +W I G L
Sbjct: 619 GSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRL 678
Query: 458 KTFEGHT-SSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
K+ GH +S+ +F G +VS AD V++W V+
Sbjct: 679 KSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVK 716
Score = 159 (61.0 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ +W D + F GH V + FHP+++ +F+GS D T R+WD+ CV
Sbjct: 580 DQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSN--YVFTGSSDKTCRMWDVHTGNCVR 637
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H + V +A++ DG L S G D ++ +WD+
Sbjct: 638 VFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDI 672
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
+D+ +WDV G C F GH V+ + PD L SG +D + VWD+ + + +
Sbjct: 621 SDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDG--RWLASGGEDGIICVWDIGSGRRL 678
Query: 68 ATLDKHF-SRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
++ H + + S+A + DG+ L+S D V +WD++
Sbjct: 679 KSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVK 716
Score = 129 (50.5 bits), Expect = 0.00017, P = 0.00017
Identities = 38/140 (27%), Positives = 56/140 (40%)
Query: 409 LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF-------- 460
LP V + TF + +EF+ +V D IK+WS+ DG LK+
Sbjct: 449 LPS-VCMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSL-DGKPLKSVLKRDRHKP 506
Query: 461 -E------GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 513
E GH+ V SF ++SC D V+LW++ T + +Y H +W +
Sbjct: 507 QENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVK 566
Query: 514 VGKKTEMFATGGSDALVNLW 533
F T D LW
Sbjct: 567 FSPLGHYFVTASHDQTARLW 586
Score = 112 (44.5 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 31/112 (27%), Positives = 60/112 (53%)
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
Y+ ++ + +++D+ + +C V GH+ V CL A+S + +G +D + +WD
Sbjct: 615 YVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCL---AVSPDGRWLASGGEDGIICVWD 671
Query: 314 SESRCCVGVGTGHMGA-VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDA 364
S + GH A + ++AFS+ LVSG +D++++VW ++DA
Sbjct: 672 IGSGRRLKSMRGHARASLYSLAFSRD-GTVLVSGCADNSVRVWDVKKNTNDA 722
Score = 101 (40.6 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH G V + F PD +K LL S S+D TVR+W L + + H V + + G
Sbjct: 515 GHSGPVYGVSFSPD-NKYLL-SCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGH 572
Query: 88 TLISAGRDKVVNLW 101
++A D+ LW
Sbjct: 573 YFVTASHDQTARLW 586
Score = 80 (33.2 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK--KCVATLDKHFSR--- 76
C + F ++ I F+ D+ +L+ +G D+ +++W L K K V D+H +
Sbjct: 453 CMYTFHNTNNNMTCIEFNDDS--TLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENT 510
Query: 77 ---------VTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
V ++ + D L+S DK V LW L Y+
Sbjct: 511 RKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYT 550
Score = 57 (25.1 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDKVVNLWDL 103
L C+ T + +T + D STL++AG +D + LW L
Sbjct: 449 LPSVCMYTFHNTNNNMTCIEFNDD-STLVAAGFQDSYIKLWSL 490
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 251 (93.4 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 65/250 (26%), Positives = 112/250 (44%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L+ TGS D R+W + +G H G + A+ ++KK NF++S D T +W D
Sbjct: 239 LLATGSYDGFARIWTKDGNLASTLGQ-HKGPIFALKWNKK-GNFILSAGVDKTTIIW--D 294
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPDLVSVV 416
+ +A+Q + + + N+ A D VC QDR P +
Sbjct: 295 AHTGEAKQLFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDR-------P----IK 343
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
TF+GH + ++++ P ++ + S D T+KIWS+ +C+ + H + + G
Sbjct: 344 TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTG 403
Query: 477 A---------QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 527
+ S D V+LW V G CI T KH++ ++++A A+G D
Sbjct: 404 PGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFD 463
Query: 528 ALVNLWHDST 537
V++W+ T
Sbjct: 464 KCVHIWNTQT 473
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 50/214 (23%), Positives = 90/214 (42%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLK----AKAVVAAHG 380
GH V A++ + + L SGS D T ++W+ S + L+
Sbjct: 167 GHESEVFICAWNP-VSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSN 225
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLP-DLVSVVTFRGHKRGIWSVEFSPVDQVVIT 439
KD+ SL +L+ TGS D A +W +L S T HK I++++++ +++
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKWNKKGNFILS 283
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
A DKT IW G + F H++ L + + SC D + + + I
Sbjct: 284 AGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNT-FASCSTDMCIHVCKLGQDRPI 342
Query: 500 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ H +++ A+ + A+ D + +W
Sbjct: 343 KTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
Score = 159 (61.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 55/245 (22%), Positives = 106/245 (43%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
I++ D + +WD+ + + H + A+ + N S S+D I V
Sbjct: 281 ILSAGVDKTTIIWDAHTGEAKQLFPFH--SAPALDVDWQSNNTFASCSTDMCIHVCK--- 335
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
L D +P+ H ++N++ P +L+ + S D T +W + V +
Sbjct: 336 LGQD--RPIK-----TFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQ 388
Query: 420 GHKRGIWSVEFSPV---------DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
H + I+++++SP + ++ +AS D T+++W + G C+ T H V
Sbjct: 389 AHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSV 448
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSD 527
+F G + S D V +W +TG + +Y + I+ + A G K A+ GS
Sbjct: 449 AFSPDGRYLASGSFDKCVHIWNTQTGALVHSY-RGTGGIFEVCWNAAGDKVGASASDGSV 507
Query: 528 ALVNL 532
+++L
Sbjct: 508 CVLDL 512
Score = 134 (52.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD---TDKS----LLFSGSDDATVRVWDL 61
D + +W + C H + H + +I + P T +L S S D+TVR+WD+
Sbjct: 370 DMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDV 429
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL KH V S+A + DG L S DK V++W+
Sbjct: 430 DRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Score = 130 (50.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 35/138 (25%), Positives = 62/138 (44%)
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CLKTFEG-- 462
V RGH+ ++ ++PV ++ + SGD T +IW++S+ S C++ EG
Sbjct: 163 VVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIR--EGGQ 220
Query: 463 ---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
V + + G + + DG ++WT + G +T +H+ I+AL KK
Sbjct: 221 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGN 279
Query: 520 MFATGGSDALVNLWHDST 537
+ G D +W T
Sbjct: 280 FILSAGVDKTTIIWDAHT 297
Score = 122 (48.0 bits), Expect = 0.00052, P = 0.00052
Identities = 52/201 (25%), Positives = 86/201 (42%)
Query: 347 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 406
+++HT + DG D E P N KA V+ H ++ A P L+ +GS D TA +
Sbjct: 142 ANNHT-DMMEVDG---DVEIPPN-KA-VVLRGHESEVFICAWNPVSDLLASGSGDSTARI 195
Query: 407 WRLPD--------LVSVVTFR--GH----KRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
W L + LV R G + + S++++ ++ T S D +IW+
Sbjct: 196 WNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-K 254
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
DG+ T H + + +G I+S G D +W TGE + H AL
Sbjct: 255 DGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAP--AL 312
Query: 513 AVG-KKTEMFATGGSDALVNL 532
V + FA+ +D +++
Sbjct: 313 DVDWQSNNTFASCSTDMCIHV 333
Score = 117 (46.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 31/130 (23%), Positives = 61/130 (46%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K G+ E+ +K+ LA ++ ++++ + +C + L H++ + +
Sbjct: 343 KTFQGHTNEVNAIKW-DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 293 LSSG------KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
G +++ + S D++VRLWD + C+ T H V +VAFS +L SG
Sbjct: 402 TGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPD-GRYLASG 460
Query: 347 SSDHTIKVWS 356
S D + +W+
Sbjct: 461 SFDKCVHIWN 470
Score = 85 (35.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+++ +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 234 NSEGTLLATGSYDGFARIWTKDGN-LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTII 292
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 293 WDAHTGEAKQLFP 305
Score = 73 (30.8 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 25/89 (28%), Positives = 40/89 (44%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD---KHFSR------- 76
+GH+ V ++P +D LL SGS D+T R+W+L + +H R
Sbjct: 166 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVP 223
Query: 77 ----VTSMAITSDGSTLISAGRDKVVNLW 101
VTS+ S+G+ L + D +W
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIW 252
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 255 (94.8 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 277 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 335
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 297 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 348
Query: 336 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 395
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 349 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 396
Query: 396 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 397 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 454
Query: 456 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 506
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 455 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 503
Score = 202 (76.2 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 56/194 (28%), Positives = 89/194 (45%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 396 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 443
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 444 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 501
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD---KHEDKIWALAVGKKTE 519
H S L + + +VS AD VK+W ++TG+C+ T KH+ + L K
Sbjct: 502 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN-- 557
Query: 520 MFATGGSDALVNLW 533
T D V LW
Sbjct: 558 FVITSSDDGTVKLW 571
Score = 201 (75.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
LK+ V+ H + + + +V +GS D T VW + T GH G+WS +
Sbjct: 292 LKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 350
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D ++
Sbjct: 351 MR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATLR 406
Query: 490 LWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 537
+W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 407 VWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 452
Score = 176 (67.0 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 392 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 449
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 450 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 507
Query: 511 ALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + +G +D+ V +W T
Sbjct: 508 GMEL--KDNILVSGNADSTVKIWDIKT 532
Score = 172 (65.6 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
Q R WR +L S +GH I ++F +++ S D T+K+WS G CL+
Sbjct: 280 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR 337
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 518
T GHT V + R I+S D +K+W TGECI T H + + + +K
Sbjct: 338 TLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 395
Query: 519 EMFATGGSDALVNLWHDST 537
+ +G DA + +W T
Sbjct: 396 VV--SGSRDATLRVWDIET 412
Score = 170 (64.9 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 327 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 386
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 420 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 469
Query: 387 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 445
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 470 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 524
Query: 446 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
+KIW I G CL+T +G H S+V F +++ DG VKLW ++TGE I
Sbjct: 525 VKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFI 579
Score = 159 (61.0 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 34/99 (34%), Positives = 55/99 (55%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWDV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+
Sbjct: 482 DTSIRVWDVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQ 537
Query: 69 TLD---KHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
TL KH S VT + + +I++ D V LWDL+
Sbjct: 538 TLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 574
Score = 154 (59.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD+
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWDIE 411
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
+C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 412 TGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 459
Score = 154 (59.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 39/122 (31%), Positives = 58/122 (47%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ GA D V VWD + C H +GH V S+ F D + SGS D ++RVWD+
Sbjct: 436 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVE 491
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV--PTYEMVEA 120
C+ TL H S + M + + L+S D V +WD++ C T+ P+
Sbjct: 492 TGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAV 549
Query: 121 VC 122
C
Sbjct: 550 TC 551
Score = 149 (57.5 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWD++ G C H GH V + + D + SG+ D V+VWD + C+
Sbjct: 402 DATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSGAYDFMVKVWDPETETCLH 457
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
TL H +RV S+ DG ++S D + +WD+ +C T+ ++
Sbjct: 458 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 503
Score = 144 (55.7 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 428 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 483
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 484 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 531
Query: 411 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 532 TGQCLQTLQGPSKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIR 580
Score = 140 (54.3 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 71/313 (22%), Positives = 135/313 (43%)
Query: 53 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
D R +L + K + D H +T + G+ ++S D + +W C T
Sbjct: 284 DTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 338
Query: 113 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 169
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 339 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 393
Query: 170 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 225
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 394 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 450
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 451 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 505
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 342
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 506 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK---NF 558
Query: 343 LVSGSSDHTIKVW 355
+++ S D T+K+W
Sbjct: 559 VITSSDDGTVKLW 571
Score = 129 (50.5 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+D L VW G C GH G V S + ++ SGS D T++VW+
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN----IIISGSTDRTLKVWNAE 371
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+C+ TL H S V M + ++S RD + +WD+ C
Sbjct: 372 TGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQC 415
Score = 97 (39.2 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 27 KGHKG-VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
KGH V++ + F + + SGSDD T++VW + KC+ TL H V S + +
Sbjct: 299 KGHDDHVITCLQFCGNR----IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 354
Query: 86 GSTLISAGRDKVVNLWDLRDYSC 108
+IS D+ + +W+ C
Sbjct: 355 --IIISGSTDRTLKVWNAETGEC 375
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 257 (95.5 bits), Expect = 5.0e-21, P = 5.0e-21
Identities = 82/283 (28%), Positives = 137/283 (48%)
Query: 255 LAVATNIEQ-VQVYDLSS--MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 311
L ++ +++ V+V+ S + L GH V+ +D SG I+ + S D +RL
Sbjct: 34 LVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSP--SGNIM-ASSSLDAHIRL 90
Query: 312 WDSESRCCV-GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
WD ES + + G + A +VAFS Q+ L +GS H KV F G+ + ++ +L
Sbjct: 91 WDLESGKQIRAIDAGPVDA-WSVAFSPDSQH-LATGS--HVGKVNIF-GV-ETGKKEYSL 144
Query: 371 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 430
+ GK I S+A +P+ + +G+ D ++ + + T GH I S+ F
Sbjct: 145 DTR------GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 431 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 490
SP Q+++TAS D IKI+ + S T GH S VL +F VS +D VK+
Sbjct: 199 SPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKV 258
Query: 491 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
W V C+ T+ H+D++W + K + D ++++
Sbjct: 259 WDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVY 301
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D + ++D+ G H +GH + S+ F PD+ LL + SDD ++++++
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYEVQ 220
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
ATL H S V ++A + D + +S+ DK V +WD+ +C
Sbjct: 221 HASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTC 266
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 40/152 (26%), Positives = 74/152 (48%)
Query: 391 NDS--LVCTGSQDRTACVWRLPD--LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTI 446
ND LV +GS D VW+ D L T GH+ G+ SV+ SP ++ ++S D I
Sbjct: 29 NDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHI 88
Query: 447 KIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKH 505
++W + G ++ + +F + +Q ++ G+ G V ++ V TG+ + D
Sbjct: 89 RLWDLESGKQIRAIDAGPVDAWSVAF-SPDSQHLATGSHVGKVNIFGVETGKKEYSLDTR 147
Query: 506 EDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
I ++A + A+G D ++N++ +T
Sbjct: 148 GKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 69/287 (24%), Positives = 120/287 (41%)
Query: 83 TSDGSTLISAGR-DKVVNLWDLRDYSCKL--TVPTYEM-VEAVCAIPPGSAFDSFLSSYN 138
++DGS L+ +G D +V +W D +L T+ +++ V +V P G+ S SS +
Sbjct: 28 SNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMAS--SSLD 85
Query: 139 QQT-IKKKRRSLEIHFITVGERGIVRMWNA----DSACLYEQKSSDVTISFEMDDSKRGF 193
+ +I I G V W+ DS L F ++ K+ +
Sbjct: 86 AHIRLWDLESGKQIRAIDAGP---VDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEY 142
Query: 194 TAATVLPSNQGLLCV--TADQQLLLYTTVEVPEKKMELILSK---RLVGYNEEILDLKFL 248
+ T + +L + + D + L ++ ++ K L G+ I L F
Sbjct: 143 SLDT---RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF- 198
Query: 249 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
+ Q L A++ +++Y++ S + L+GH VL A S V+ S D S
Sbjct: 199 SPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVL---NVAFSPDDTHFVSSSSDKS 255
Query: 309 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
V++WD +R CV H V V ++K +VS + D I V+
Sbjct: 256 VKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSK-IVSVADDQEIHVY 301
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 421 HKRGIWSVEF----SPVDQVVITASGDKTIKIWSISDG--SCLKTFEGHTSSVLRASFLT 474
H+ IWSV + + ++VI+ S D +K+W SD T EGH V+
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSP 74
Query: 475 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
G + S D ++LW + +G+ I D W++A ++ ATG VN++
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIF 133
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +++V GH V ++ F PD D + S S D +V+VWD+ A+ CV
Sbjct: 211 DGYIKIYEVQHASLAATLSGHGSWVLNVAFSPD-DTHFV-SSSSDKSVKVWDVSARTCVH 268
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
T H +V + +GS ++S D+ ++++D
Sbjct: 269 TFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 270 (100.1 bits), Expect = 5.3e-21, Sum P(2) = 5.3e-21
Identities = 70/246 (28%), Positives = 114/246 (46%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
+L GH V A SSG +++ S+D S+R WD S + GH V V S
Sbjct: 337 ILRGHCGPVYSTRFLADSSG---LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDIS 393
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
+ SGS D T ++WSFD P+ + A H D++ + PN + +
Sbjct: 394 P-FSLYFASGSHDRTARLWSFD-----RTYPLR-----IYAGHLADVDCVKFHPNSNYLA 442
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
TGS D+T +W SV F GH+ + S+ FSP + + +A D+ +K+W ++ G+
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 516
K GHT S+ +F I S D V++W +R+ C D ++ + G+
Sbjct: 503 FKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQ 562
Query: 517 KTEMFA 522
+ + +
Sbjct: 563 MSNVLS 568
Score = 234 (87.4 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 57/209 (27%), Positives = 90/209 (43%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH G V + F L+S S D +I+ W ++ + H +
Sbjct: 340 GHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNTV----------LYQGHAYPVW 388
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
+ ++P +GS DRTA +W + + GH + V+F P + T S DK
Sbjct: 389 DVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 448
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
T+++WS G+ ++ F GH VL SF G + S G D +KLW + +G
Sbjct: 449 TVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRG 508
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLW 533
H D I +LA + + A+ D V +W
Sbjct: 509 HTDSITSLAFSPDSGLIASASMDNSVRVW 537
Score = 179 (68.1 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 39/177 (22%), Positives = 76/177 (42%)
Query: 358 DGLSDDAEQPMNLKAKA-VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV 416
D L ++ + N + ++ H + S + S + + S+D + W L + V
Sbjct: 319 DTLEEEENEEDNTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV 378
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
++GH +W V+ SP + S D+T ++WS L+ + GH + V F
Sbjct: 379 LYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS 438
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ + D V+LW+ + G + + H + +L+ + A+ G D + LW
Sbjct: 439 NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLW 495
Score = 155 (59.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 32/100 (32%), Positives = 48/100 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +W G F GH+G V S+ F P+ L S +D +++WDL +
Sbjct: 447 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNG--KYLASAGEDQRLKLWDLASGTLFK 504
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
L H +TS+A + D + SA D V +WD+R C
Sbjct: 505 ELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCC 544
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 32/95 (33%), Positives = 47/95 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W D + + GH V + FHP+++ L +GS D TVR+W V
Sbjct: 405 DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN--YLATGSTDKTVRLWSAQQGNSVR 462
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H V S++ + +G L SAG D+ + LWDL
Sbjct: 463 LFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDL 497
Score = 133 (51.9 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 38/113 (33%), Positives = 59/113 (52%)
Query: 232 SKRL-VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
S RL G+ +L L F +YLA A ++++++DL+S + L GH++ + L
Sbjct: 460 SVRLFTGHRGPVLSLSF-SPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSL-- 516
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFL 343
A S LI + S DNSVR+WD S CC G G + V ++ ++ N L
Sbjct: 517 -AFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGV-YTGQMSNVL 567
Score = 82 (33.9 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 34/137 (24%), Positives = 54/137 (39%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 86
+GH G V S F D+ S L S S+D ++R WDL + H V + I+
Sbjct: 339 RGHCGPVYSTRFLADS--SGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFS 396
Query: 87 STLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGSAFDSFLSSYNQQTIKKK 145
S D+ LW D + L + + + C P S + + S+ +
Sbjct: 397 LYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 146 RRSLEIHFITVGERGIV 162
++ + T G RG V
Sbjct: 456 QQGNSVRLFT-GHRGPV 471
Score = 55 (24.4 bits), Expect = 5.3e-21, Sum P(2) = 5.3e-21
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 42 TDKSLLFSGSDDATVRVWDLLAKK 65
+D LL +G D++ +++W L +KK
Sbjct: 278 SDSKLLAAGFDNSCIKLWSLRSKK 301
Score = 50 (22.7 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 274 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 317
C Y ++ L+T +SS L+ G ++ ++LW S+
Sbjct: 260 CFYAFYNTEQL---LNTAEISSDSKLLAAGFDNSCIKLWSLRSK 300
Score = 48 (22.0 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 82 ITSDGSTLISAGRDK-VVNLWDLRDYSCK 109
I+SD S L++AG D + LW LR K
Sbjct: 276 ISSD-SKLLAAGFDNSCIKLWSLRSKKLK 303
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 265 (98.3 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 52/163 (31%), Positives = 86/163 (52%)
Query: 371 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 430
K + + H K I+++ +P + T S D+T +W + DL T GHK G+ +
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAW 129
Query: 431 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 490
S + ++TAS DKT+KI+ + KT +GHT+ V +F + + +VS D V++
Sbjct: 130 SADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRI 189
Query: 491 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
W VRTG C+ T H D + A++ + + +G D LV +W
Sbjct: 190 WDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW 232
Score = 264 (98.0 bits), Expect = 8.8e-21, P = 8.8e-21
Identities = 57/210 (27%), Positives = 100/210 (47%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH ++ AV FS FL + S+D T+K+W+ +SD L + + H +N
Sbjct: 77 GHTKSISAVKFSP-CGKFLGTSSADKTVKIWN---MSD-------LSCERTLTGHKLGVN 125
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
A + + + T S D+T ++ +P + T +GH ++ F+P +V++ S D+
Sbjct: 126 DFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDE 185
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY-D 503
+++IW + G C+KT H+ V SF G+ I S DGLV++W G+C+ T D
Sbjct: 186 SVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVD 245
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ + + + D + LW
Sbjct: 246 DENPPVAFVKFSPNGKYILSSNLDNTLKLW 275
Score = 232 (86.7 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 63/270 (23%), Positives = 128/270 (47%)
Query: 228 ELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLC 287
+L + L G+ + D + + + + A++ + +++Y++ ++ + L GH+ V C
Sbjct: 110 DLSCERTLTGHKLGVNDFAWSADSKS-IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFC 168
Query: 288 LDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS 347
C + L+V+GS D SVR+WD + CV H V AV+F++ + + SGS
Sbjct: 169 ---CNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRD-GSLITSGS 224
Query: 348 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D +++W D A K +V + + +PN + + + D T +W
Sbjct: 225 YDGLVRIW------DTANGQC---VKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLW 275
Query: 408 RLPDLVSVVTFRGHKRGIWSV--EFSPVD-QVVITASGDKTIKIWSISDGSCLKTFEGHT 464
++ ++GH+ + + FS + +I+ S D I +W++ +++ EGHT
Sbjct: 276 DFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHT 335
Query: 465 SSVLRASFLTRGAQIVSCGA---DGLVKLW 491
+V+ AS +++ GA D +++W
Sbjct: 336 QAVI-ASDCHPMQNMIASGALEPDNTIRIW 364
Score = 220 (82.5 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 62/246 (25%), Positives = 106/246 (43%)
Query: 296 GKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
GK L T S D +V++W+ C TGH V A+S ++ +V+ S D T+K++
Sbjct: 91 GKFL-GTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKS-IVTASDDKTLKIY 148
Query: 356 SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 415
E P +K + H + P SLV +GS D + +W + + V
Sbjct: 149 ---------EVP-TVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCV 198
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF-EGHTSSVLRASFLT 474
T H + +V F+ ++ + S D ++IW ++G C+KT + V F
Sbjct: 199 KTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSP 258
Query: 475 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT---EMFATGGSDALVN 531
G I+S D +KLW G+ + Y HE+ + + + +G D +
Sbjct: 259 NGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIY 318
Query: 532 LWHDST 537
+W+ T
Sbjct: 319 VWNLQT 324
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 44/143 (30%), Positives = 67/143 (46%)
Query: 3 ALLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
+++ +D K L +++V KGH V F+P + SL+ SGS D +VR+WD+
Sbjct: 135 SIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQS--SLVVSGSFDESVRIWDV 192
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC-KLTVPTYEMVEA 120
CV TL H V++++ DGS + S D +V +WD + C K V A
Sbjct: 193 RTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVA 252
Query: 121 VCAIPPGSAFDSFLSSYNQQTIK 143
P + LSS T+K
Sbjct: 253 FVKFSPNGKY--ILSSNLDNTLK 273
Score = 145 (56.1 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD+ V +W++ C GHK V+ + D+ KS++ + SDD T++++++ K
Sbjct: 99 ADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADS-KSIV-TASDDKTLKIYEVPTVKMA 156
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPP 126
TL H + V S ++S D+ V +WD+R C T+P + + V AV
Sbjct: 157 KTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRD 216
Query: 127 GSAFDSFLSSYN 138
GS S SY+
Sbjct: 217 GSLITS--GSYD 226
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 64/310 (20%), Positives = 145/310 (46%)
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI 124
K ++T++ H ++++ + G L ++ DK V +W++ D SC+ T+ +++ V
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKL--GVNDF 127
Query: 125 PPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF 184
+ S +++ + +T+K E+ + + + + N C + +SS + +S
Sbjct: 128 AWSADSKSIVTASDDKTLK----IYEVPTVKMAKT-LKGHTNYVFCCNFNPQSS-LVVSG 181
Query: 185 EMDDSKRGFTAAT-----VLPSNQG-LLCVTADQQLLLYTT------VEVPEKKMELILS 232
D+S R + T LP++ + V+ ++ L T+ V + + +
Sbjct: 182 SFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVK 241
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQ-VQVYDLSSMSCSYVLAGHSEIVLCL-DT 290
+ N + +KF +Y+ +++N++ ++++D GH C+
Sbjct: 242 TLVDDENPPVAFVKF-SPNGKYI-LSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFAN 299
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--S 348
+++ GK I++GS+D + +W+ +++ V GH AV A + +QN + SG+
Sbjct: 300 FSVTGGK-WIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIA-SDCHPMQNMIASGALEP 357
Query: 349 DHTIKVWSFD 358
D+TI++W D
Sbjct: 358 DNTIRIWRSD 367
Score = 128 (50.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 61/305 (20%), Positives = 128/305 (41%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 86
+GH +S++ F P K L + S D TV++W++ C TL H V A ++D
Sbjct: 76 EGHTKSISAVKFSP-CGK-FLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADS 133
Query: 87 STLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSA------FDSFLSSYNQQ 140
++++A DK + ++++ T+ + C P S+ FD + ++ +
Sbjct: 134 KSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVR 193
Query: 141 T---IKK-KRRSLEIHFITVGERG-IVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 195
T +K S + ++ G ++ + D ++ + +DD
Sbjct: 194 TGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAF 253
Query: 196 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGY--NEEILDLKFLGEEEQ 253
P+ + +L D L L+ K L K+ G+ N+ + F +
Sbjct: 254 VKFSPNGKYILSSNLDNTLKLWDF----GKGKTL---KQYQGHENNKYCIFANFSVTGGK 306
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGS--KDNSVRL 311
++ + ++ V++L + L GH++ V+ D + + +I +G+ DN++R+
Sbjct: 307 WIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQN---MIASGALEPDNTIRI 363
Query: 312 WDSES 316
W S+S
Sbjct: 364 WRSDS 368
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 255 (94.8 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 277 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 335
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 375 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 426
Query: 336 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 395
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 427 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 474
Query: 396 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 475 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 532
Query: 456 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 506
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 533 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 581
Score = 203 (76.5 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 56/194 (28%), Positives = 90/194 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 474 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 521
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 522 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 579
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY---DKHEDKIWALAVGKKTE 519
H S L + + +VS AD VK+W ++TG+C+ T +KH+ + L K
Sbjct: 580 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-- 635
Query: 520 MFATGGSDALVNLW 533
T D V LW
Sbjct: 636 FVITSSDDGTVKLW 649
Score = 201 (75.8 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
LK+ V+ H + + + +V +GS D T VW + T GH G+WS +
Sbjct: 370 LKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 428
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D ++
Sbjct: 429 MR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATLR 484
Query: 490 LWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 537
+W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 485 VWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 530
Score = 176 (67.0 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 470 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 527
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 528 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 585
Query: 511 ALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + +G +D+ V +W T
Sbjct: 586 GMEL--KDNILVSGNADSTVKIWDIKT 610
Score = 172 (65.6 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
Q R WR +L S +GH I ++F +++ S D T+K+WS G CL+
Sbjct: 358 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR 415
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 518
T GHT V + R I+S D +K+W TGECI T H + + + +K
Sbjct: 416 TLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 473
Query: 519 EMFATGGSDALVNLWHDST 537
+ +G DA + +W T
Sbjct: 474 VV--SGSRDATLRVWDIET 490
Score = 170 (64.9 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 327 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 386
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 498 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 547
Query: 387 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 445
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 548 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 602
Query: 446 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
+KIW I G CL+T +G H S+V F +++ DG VKLW ++TGE I
Sbjct: 603 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFI 657
Score = 160 (61.4 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWDV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+
Sbjct: 560 DTSIRVWDVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQ 615
Query: 69 TL---DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
TL +KH S VT + + +I++ D V LWDL+
Sbjct: 616 TLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 652
Score = 154 (59.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD+
Sbjct: 434 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWDIE 489
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
+C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 490 TGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 537
Score = 153 (58.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 37/110 (33%), Positives = 55/110 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ GA D V VWD + C H +GH V S+ F D + SGS D ++RVWD+
Sbjct: 514 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVE 569
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
C+ TL H S + M + + L+S D V +WD++ C T+
Sbjct: 570 TGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTL 617
Score = 149 (57.5 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWD++ G C H GH V + + D + SG+ D V+VWD + C+
Sbjct: 480 DATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSGAYDFMVKVWDPETETCLH 535
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
TL H +RV S+ DG ++S D + +WD+ +C T+ ++
Sbjct: 536 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 581
Score = 144 (55.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 506 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 561
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 562 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 609
Query: 411 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 610 TGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIR 658
Score = 140 (54.3 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 71/313 (22%), Positives = 135/313 (43%)
Query: 53 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
D R +L + K + D H +T + G+ ++S D + +W C T
Sbjct: 362 DTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 416
Query: 113 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 169
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 417 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 471
Query: 170 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 225
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 472 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 528
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 529 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 583
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 342
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 584 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NF 636
Query: 343 LVSGSSDHTIKVW 355
+++ S D T+K+W
Sbjct: 637 VITSSDDGTVKLW 649
Score = 129 (50.5 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+D L VW G C GH G V S + ++ SGS D T++VW+
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN----IIISGSTDRTLKVWNAE 449
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+C+ TL H S V M + ++S RD + +WD+ C
Sbjct: 450 TGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQC 493
Score = 97 (39.2 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 27 KGHKG-VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
KGH V++ + F + + SGSDD T++VW + KC+ TL H V S + +
Sbjct: 377 KGHDDHVITCLQFCGNR----IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 432
Query: 86 GSTLISAGRDKVVNLWDLRDYSC 108
+IS D+ + +W+ C
Sbjct: 433 --IIISGSTDRTLKVWNAETGEC 453
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 255 (94.8 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 277 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 335
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 380 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 431
Query: 336 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 395
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 432 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 479
Query: 396 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 480 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 537
Query: 456 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 506
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 538 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 586
Score = 203 (76.5 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 56/194 (28%), Positives = 90/194 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 479 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 526
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 527 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 584
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY---DKHEDKIWALAVGKKTE 519
H S L + + +VS AD VK+W ++TG+C+ T +KH+ + L K
Sbjct: 585 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-- 640
Query: 520 MFATGGSDALVNLW 533
T D V LW
Sbjct: 641 FVITSSDDGTVKLW 654
Score = 201 (75.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
LK+ V+ H + + + +V +GS D T VW + T GH G+WS +
Sbjct: 375 LKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 433
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D ++
Sbjct: 434 MR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATLR 489
Query: 490 LWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 537
+W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 490 VWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 535
Score = 176 (67.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 475 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 532
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 533 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 590
Query: 511 ALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + +G +D+ V +W T
Sbjct: 591 GMEL--KDNILVSGNADSTVKIWDIKT 615
Score = 172 (65.6 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
Q R WR +L S +GH I ++F +++ S D T+K+WS G CL+
Sbjct: 363 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR 420
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 518
T GHT V + R I+S D +K+W TGECI T H + + + +K
Sbjct: 421 TLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 478
Query: 519 EMFATGGSDALVNLWHDST 537
+ +G DA + +W T
Sbjct: 479 VV--SGSRDATLRVWDIET 495
Score = 170 (64.9 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 327 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 386
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 503 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 552
Query: 387 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 445
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 553 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 607
Query: 446 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
+KIW I G CL+T +G H S+V F +++ DG VKLW ++TGE I
Sbjct: 608 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFI 662
Score = 160 (61.4 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWDV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+
Sbjct: 565 DTSIRVWDVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQ 620
Query: 69 TL---DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
TL +KH S VT + + +I++ D V LWDL+
Sbjct: 621 TLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 657
Score = 154 (59.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD+
Sbjct: 439 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWDIE 494
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
+C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 495 TGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 542
Score = 153 (58.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 37/110 (33%), Positives = 55/110 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ GA D V VWD + C H +GH V S+ F D + SGS D ++RVWD+
Sbjct: 519 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVE 574
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
C+ TL H S + M + + L+S D V +WD++ C T+
Sbjct: 575 TGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTL 622
Score = 149 (57.5 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWD++ G C H GH V + + D + SG+ D V+VWD + C+
Sbjct: 485 DATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSGAYDFMVKVWDPETETCLH 540
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
TL H +RV S+ DG ++S D + +WD+ +C T+ ++
Sbjct: 541 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 586
Score = 144 (55.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 511 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 566
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 567 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 614
Query: 411 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 615 TGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIR 663
Score = 140 (54.3 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 71/313 (22%), Positives = 135/313 (43%)
Query: 53 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
D R +L + K + D H +T + G+ ++S D + +W C T
Sbjct: 367 DTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 421
Query: 113 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 169
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 422 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 476
Query: 170 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 225
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 477 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 533
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 534 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 588
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 342
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 589 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NF 641
Query: 343 LVSGSSDHTIKVW 355
+++ S D T+K+W
Sbjct: 642 VITSSDDGTVKLW 654
Score = 129 (50.5 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+D L VW G C GH G V S + ++ SGS D T++VW+
Sbjct: 399 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN----IIISGSTDRTLKVWNAE 454
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+C+ TL H S V M + ++S RD + +WD+ C
Sbjct: 455 TGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQC 498
Score = 97 (39.2 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 27 KGHKG-VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
KGH V++ + F + + SGSDD T++VW + KC+ TL H V S + +
Sbjct: 382 KGHDDHVITCLQFCGNR----IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 437
Query: 86 GSTLISAGRDKVVNLWDLRDYSC 108
+IS D+ + +W+ C
Sbjct: 438 --IIISGSTDRTLKVWNAETGEC 458
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 256 (95.2 bits), Expect = 6.4e-21, P = 6.4e-21
Identities = 66/221 (29%), Positives = 102/221 (46%)
Query: 320 VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH 379
VG GH G V ++A S + + ++S S D T+ VW DA P KA + H
Sbjct: 14 VGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLT--PTDATSPG--KAHRSLKGH 69
Query: 380 GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVIT 439
+ + ++ + +GS D T +W + VS F+GH + + SV FS ++ +I+
Sbjct: 70 SHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIIS 129
Query: 440 ASGDKTIKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 496
S D TIK+W+ G C T EG H V F IVS D VK+W +++
Sbjct: 130 GSRDATIKVWNTL-GECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSF 188
Query: 497 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+C T H + + + + A+GG D LW S+
Sbjct: 189 KCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSS 229
Score = 209 (78.6 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 53/180 (29%), Positives = 87/180 (48%)
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAP-NDSLVCTGSQDRTACVWRL-P-DLVSVV---- 416
A Q L+ ++V H + S+AV+P N + + S+D+T VW+L P D S
Sbjct: 6 APQVTYLEVGSLVG-HNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHR 64
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
+ +GH + V S Q ++ S D T+++W I+ G + F+GHT V+ +F +
Sbjct: 65 SLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDN 124
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYD---KHEDKIWALAVGKKTEMFATGGSDALVNLW 533
QI+S D +K+W GEC T + H+D + + T +G D V +W
Sbjct: 125 RQIISGSRDATIKVWNT-LGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIW 183
Score = 186 (70.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 63/265 (23%), Positives = 111/265 (41%)
Query: 278 LAGHSEIVLCLDTCALS-SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
L GH+ V + A+S I++ S+D +V +W G H G F
Sbjct: 17 LVGHNGFVTSI---AVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFV 73
Query: 337 KKLQ-----NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPN 391
+ + F +SGS D+T+++W D + ++ + + H +D+ S+A + +
Sbjct: 74 QDVVISHDGQFALSGSWDNTLRLW-------DITKGVSTR---LFKGHTQDVMSVAFSSD 123
Query: 392 DSLVCTGSQDRTACVWRLPDLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKI 448
+ + +GS+D T VW T G H+ + + FSP +++ S D +KI
Sbjct: 124 NRQIISGSRDATIKVWNTLGECKF-TLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKI 182
Query: 449 WSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDK 508
W I C T HT V + G+ S G D LW + +G+ + + +
Sbjct: 183 WDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEAR-NT 241
Query: 509 IWALAVGKKTEMFATGGSDALVNLW 533
I ALA + D ++ +W
Sbjct: 242 INALAFSPNKYWLSAATDDKII-IW 265
Score = 181 (68.8 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 43/131 (32%), Positives = 66/131 (50%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
FAL D + +WD+ G T FKGH V S+ F +D + SGS DAT++VW+
Sbjct: 84 FALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAF--SSDNRQIISGSRDATIKVWNT 141
Query: 62 LAKKCVATLD---KHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-M 117
L + C TL+ H V+ + + + T++S D V +WD++ + C T+ +
Sbjct: 142 LGE-CKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGY 200
Query: 118 VEAVCAIPPGS 128
V V P GS
Sbjct: 201 VNTVTISPDGS 211
Score = 147 (56.8 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 37/104 (35%), Positives = 55/104 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKG---HKGVVSSILFHPDTDKSLLFSGSDDATVRVW 59
++ G+ D + VW+ G C +G H+ VS I F P+T + SGS D V++W
Sbjct: 127 IISGSRDATIKVWNTLGE-CKFTLEGPEAHQDWVSCIRFSPNTPT--IVSGSWDNKVKIW 183
Query: 60 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
D+ + KC TL H V ++ I+ DGS S G+D LW+L
Sbjct: 184 DIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWEL 227
Score = 129 (50.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 231 LSKRLV-GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAG---HSEIVL 286
+S RL G+ ++++ + F + Q ++ + + ++V++ C + L G H + V
Sbjct: 103 VSTRLFKGHTQDVMSVAFSSDNRQIISGSRDAT-IKVWNTLG-ECKFTLEGPEAHQDWVS 160
Query: 287 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
C+ S IV+GS DN V++WD +S C T H G V V S + SG
Sbjct: 161 CI---RFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPD-GSLCASG 216
Query: 347 SSDHTIKVWSFDGLSDDAEQPM-NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 405
D +W LS +P+ L+A+ IN+LA +PN + + D+
Sbjct: 217 GKDTFACLWE---LSSG--KPLYKLEAR-------NTINALAFSPNKYWLSAATDDKII- 263
Query: 406 VWRL 409
+W L
Sbjct: 264 IWDL 267
Score = 127 (49.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 30/101 (29%), Positives = 53/101 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ D KV +WD+ C H H G V+++ PD SL SG D +W+L
Sbjct: 171 IVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDG--SLCASGGKDTFACLWELS 228
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+ K + L+ + + ++A + + L +A DK++ +WDL
Sbjct: 229 SGKPLYKLEAR-NTINALAFSPNKYWLSAATDDKII-IWDL 267
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 34/110 (30%), Positives = 50/110 (45%)
Query: 9 DRKVLVWDV---DG---GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
D+ V+VW + D G KGH V ++ D +L SGS D T+R+WD+
Sbjct: 43 DKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFAL--SGSWDNTLRLWDIT 100
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
H V S+A +SD +IS RD + +W+ CK T+
Sbjct: 101 KGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLG-ECKFTL 149
Score = 103 (41.3 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 27/82 (32%), Positives = 38/82 (46%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK------KCVATLDKHFSRVTSMA 81
GH G V+SI P+ +++ S S D TV VW L K +L H V +
Sbjct: 19 GHNGFVTSIAVSPENPDTII-SSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVV 77
Query: 82 ITSDGSTLISAGRDKVVNLWDL 103
I+ DG +S D + LWD+
Sbjct: 78 ISHDGQFALSGSWDNTLRLWDI 99
Score = 70 (29.7 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 67 VATLDKHFSRVTSMAITSDG-STLISAGRDKVVNLWDL 103
V +L H VTS+A++ + T+IS+ RDK V +W L
Sbjct: 14 VGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQL 51
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 277 (102.6 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 88/332 (26%), Positives = 150/332 (45%)
Query: 224 EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSE 283
++ +++ L LV ++ + ++F + +YLA N Q++D++ VL S
Sbjct: 255 QRVLDVELVHHLV-HDSVVCCVRF-SRDGKYLATGCN-RSAQIFDVTLGQNVAVLQDESV 311
Query: 284 I----VLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL 339
+ C GK L TG++D +R+WD +R + +GH + ++ F+
Sbjct: 312 DKSGDLYIRSVCFSPDGKYL-ATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGN- 369
Query: 340 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD-INSLAVAPNDSLVCTG 398
++ SGS D T+++W D AE K V +D + ++A++P+ V G
Sbjct: 370 GRYIASGSGDKTVRLW------DIAE------GKLVYTLSIEDGVTTVAMSPDGLYVAAG 417
Query: 399 SQDRTACVWRLPDLVSVVTFR---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS--- 452
S D+T VW V GHK ++SV F+P + +++ S DKTIK+W ++
Sbjct: 418 SLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPR 477
Query: 453 --------DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
G C +TFEGH VL G ++S D V+ W TG
Sbjct: 478 QQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQG 537
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLWHDS 536
H++ + ++A +FATG D +W S
Sbjct: 538 HKNSVISVAPSPTGNLFATGSGDMRARIWRYS 569
Score = 202 (76.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 60/222 (27%), Positives = 101/222 (45%)
Query: 330 VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVA 389
+ +V FS +L +G+ D I+VW D A + + K + + H +DI SL A
Sbjct: 319 IRSVCFSPD-GKYLATGAEDKQIRVW------DIATRTI----KHIFSGHEQDIYSLDFA 367
Query: 390 PNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW 449
N + +GS D+T +W + + V T + G+ +V SP V S DKT+++W
Sbjct: 368 GNGRYIASGSGDKTVRLWDIAEGKLVYTL-SIEDGVTTVAMSPDGLYVAAGSLDKTVRVW 426
Query: 450 SISDGSCLKTFE---GHTSSVLRASFLTRGAQIVSCGADGLVKLWTV-----------RT 495
+ G ++ E GH SV +F G ++VS D +KLW + +
Sbjct: 427 DTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKG 486
Query: 496 GECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
G+C T++ H+D + ++ + +G D V W T
Sbjct: 487 GKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPIT 528
Score = 146 (56.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 36/100 (36%), Positives = 54/100 (54%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D+++ VWD+ H F GH+ + S+ F + + SGS D TVR+WD+
Sbjct: 331 LATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNG--RYIASGSGDKTVRLWDIA 388
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
K V TL VT++A++ DG + + DK V +WD
Sbjct: 389 EGKLVYTLSIE-DGVTTVAMSPDGLYVAAGSLDKTVRVWD 427
Score = 139 (54.0 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 42/137 (30%), Positives = 68/137 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFK---GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-LAK 64
D+ V VWD G+ + GHK V S+ F P+ K L+ SGS D T+++W+L L +
Sbjct: 420 DKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPN-GKELV-SGSLDKTIKLWELNLPR 477
Query: 65 ----------KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT 114
KC T + H V S+ +T DG ++S +D+ V WD + ++ +
Sbjct: 478 QQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQG 537
Query: 115 YE-MVEAVCAIPPGSAF 130
++ V +V P G+ F
Sbjct: 538 HKNSVISVAPSPTGNLF 554
Score = 124 (48.7 bits), Expect = 0.00037, P = 0.00037
Identities = 33/98 (33%), Positives = 47/98 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +WD+ G + GV +++ PD + +GS D TVRVWD V
Sbjct: 379 DKTVRLWDIAEGKLVYTLSIEDGV-TTVAMSPDG--LYVAAGSLDKTVRVWDTTTGYLVE 435
Query: 69 TL---DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
L D H V S+A +G L+S DK + LW+L
Sbjct: 436 RLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWEL 473
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 277 (102.6 bits), Expect = 8.1e-21, P = 8.1e-21
Identities = 84/300 (28%), Positives = 135/300 (45%)
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVL----AGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
+Y+A N Q++D+++ VL A + + C GK L TG++D
Sbjct: 312 KYVATGCN-RSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGKYL-ATGAEDKQ 369
Query: 309 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 368
+R+WD +R GH + ++ F++ + + SGS D T+++W D E
Sbjct: 370 IRVWDITTRTIRIQFAGHEQDIYSLDFARDGRT-IASGSGDRTVRLW-------DIE--- 418
Query: 369 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG---HKRGI 425
N A V + ++A++P+ V GS D++ VW L V G HK +
Sbjct: 419 NGTALTVFTIED-GVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSV 477
Query: 426 WSVEFSPVDQVVITASGDKTIKIWSISD------------GSCLKTFEGHTSSVLRASFL 473
+SV FSP + ++T S DKTIK+W ++ G C+KTFEGH VL +
Sbjct: 478 YSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALT 537
Query: 474 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
++S D V+ W RTG H++ + ++A FATG D +W
Sbjct: 538 PDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
Score = 236 (88.1 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 71/252 (28%), Positives = 122/252 (48%)
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
+YLA +Q++V+D+++ + AGH + + LD G+ I +GS D +VRLW
Sbjct: 359 KYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFAR--DGRT-IASGSGDRTVRLW 415
Query: 313 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 372
D E+ + V T G V VA S + ++ +GS D +++VW D Q ++
Sbjct: 416 DIENGTALTVFTIEDG-VTTVAISPDTK-YVAAGSLDKSVRVW-------DLTQGCPVER 466
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL--P--DLVS--------VVTFRG 420
H + S+A +PN + TGS D+T +W L P ++ + V TF G
Sbjct: 467 LEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEG 526
Query: 421 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 480
H+ + SV +P +Q V++ S D+ ++ W GS +GH +SV+ + G
Sbjct: 527 HRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFA 586
Query: 481 SCGADGLVKLWT 492
+ D ++W+
Sbjct: 587 TGSGDMRARIWS 598
Score = 222 (83.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 72/279 (25%), Positives = 127/279 (45%)
Query: 281 HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES--RCCV-----GVGTGHMGAVGAV 333
H +V C+ A GK + TG + S +++D + + CV TG + + +V
Sbjct: 298 HESVVCCVRFSA--DGKY-VATGC-NRSAQIFDVNTGEKVCVLQDDNADTTGDL-YIRSV 352
Query: 334 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 393
FS +L +G+ D I+VW D + + ++ A H +DI SL A +
Sbjct: 353 CFSPD-GKYLATGAEDKQIRVW------DITTRTIRIQ----FAGHEQDIYSLDFARDGR 401
Query: 394 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
+ +GS DRT +W + + ++ F + G+ +V SP + V S DK++++W ++
Sbjct: 402 TIASGSGDRTVRLWDIENGTALTVFT-IEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQ 460
Query: 454 GSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT------------GEC 498
G ++ EG H SV +F G +V+ D +KLW + T G C
Sbjct: 461 GCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRC 520
Query: 499 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ T++ H D + ++A+ + +G D V W T
Sbjct: 521 VKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRT 559
Score = 140 (54.3 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKG---HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 65
D+ V VWD+ G +G HK V S+ F P+ + L+ +GS D T+++W+L +
Sbjct: 450 DKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPN-GRDLV-TGSLDKTIKLWELATPR 507
Query: 66 ------------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVP 113
CV T + H V S+A+T D ++S +D+ V WD R S +L +
Sbjct: 508 GNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQ 567
Query: 114 TYE-MVEAVCAIPPGSAF 130
++ V +V P G F
Sbjct: 568 GHKNSVISVAPSPTGGFF 585
Score = 125 (49.1 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 30/98 (30%), Positives = 47/98 (47%)
Query: 33 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 92
+ S+ F PD L +G++D +RVWD+ + H + S+ DG T+ S
Sbjct: 349 IRSVCFSPDG--KYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASG 406
Query: 93 GRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAF 130
D+ V LWD+ + + LTV T E AI P + +
Sbjct: 407 SGDRTVRLWDIENGTA-LTVFTIEDGVTTVAISPDTKY 443
Score = 123 (48.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D+++ VWD+ F GH+ + S+ F D + SGS D TVR+WD+
Sbjct: 361 LATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFA--RDGRTIASGSGDRTVRLWDI- 417
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
T+ VT++AI+ D + + DK V +WDL
Sbjct: 418 ENGTALTVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVWDL 458
Score = 102 (41.0 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 274 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAV 333
C GH + VL + AL+ +++GSKD V+ WD + + GH +V +V
Sbjct: 520 CVKTFEGHRDFVLSV---ALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISV 576
Query: 334 AFSKKLQNFLVSGSSDHTIKVWSF 357
A S F +GS D ++WS+
Sbjct: 577 APSPT-GGFFATGSGDMRARIWSY 599
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 255 (94.8 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 277 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 335
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 428 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 479
Query: 336 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 395
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 480 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 527
Query: 396 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 528 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 585
Query: 456 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 506
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 586 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 634
Score = 202 (76.2 bits), Expect = 8.9e-21, Sum P(2) = 8.9e-21
Identities = 56/194 (28%), Positives = 89/194 (45%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 527 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 574
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 575 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 632
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD---KHEDKIWALAVGKKTE 519
H S L + + +VS AD VK+W ++TG+C+ T KH+ + L K
Sbjct: 633 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN-- 688
Query: 520 MFATGGSDALVNLW 533
T D V LW
Sbjct: 689 FVITSSDDGTVKLW 702
Score = 202 (76.2 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 48/170 (28%), Positives = 83/170 (48%)
Query: 369 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 428
+LK+ V+ H + + + +V +GS D T VW + T GH G+WS
Sbjct: 422 DLKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 480
Query: 429 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 488
+ D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D +
Sbjct: 481 QMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATL 536
Query: 489 KLWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 537
++W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 537 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 583
Score = 176 (67.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 523 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 580
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 581 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 638
Query: 511 ALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + +G +D+ V +W T
Sbjct: 639 GMEL--KDNILVSGNADSTVKIWDIKT 663
Score = 176 (67.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 44/139 (31%), Positives = 65/139 (46%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
Q R WR DL S +GH I ++F +++ S D T+K+WS G CL+
Sbjct: 411 QHRIDTNWRRGDLKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR 468
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 518
T GHT V + R I+S D +K+W TGECI T H + + + +K
Sbjct: 469 TLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 526
Query: 519 EMFATGGSDALVNLWHDST 537
+ +G DA + +W T
Sbjct: 527 VV--SGSRDATLRVWDIET 543
Score = 173 (66.0 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 56/177 (31%), Positives = 82/177 (46%)
Query: 327 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 386
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 551 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 600
Query: 387 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 445
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 601 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 655
Query: 446 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
+KIW I G CL+T +G H S+V F +++ DG VKLW +RTGE I
Sbjct: 656 VKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLRTGEFI 710
Score = 162 (62.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 35/99 (35%), Positives = 55/99 (55%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWDV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+
Sbjct: 613 DTSIRVWDVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQ 668
Query: 69 TLD---KHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
TL KH S VT + + +I++ D V LWDLR
Sbjct: 669 TLQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLR 705
Score = 154 (59.3 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD+
Sbjct: 487 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWDIE 542
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
+C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 543 TGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 590
Score = 154 (59.3 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 43/142 (30%), Positives = 68/142 (47%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ GA D V VWD + C H +GH V S+ F D + SGS D ++RVWD+
Sbjct: 567 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF----DGIHVVSGSLDTSIRVWDVE 622
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVP-TYEMVEAV 121
C+ TL H S + M + + L+S D V +WD++ C T+ ++ AV
Sbjct: 623 TGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAV 680
Query: 122 CAIPPGSAFDSFLSSYNQQTIK 143
+ F ++S + T+K
Sbjct: 681 TCLQFNKNF--VITSSDDGTVK 700
Score = 149 (57.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + VWD++ G C H GH V + + D + SG+ D V+VWD + C+
Sbjct: 533 DATLRVWDIETGQCLHVLMGHVAAVRCVQY----DGRRVVSGAYDFMVKVWDPETETCLH 588
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
TL H +RV S+ DG ++S D + +WD+ +C T+ ++
Sbjct: 589 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 634
Score = 144 (55.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 72/313 (23%), Positives = 135/313 (43%)
Query: 53 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
D R DL + K + D H +T + G+ ++S D + +W C T
Sbjct: 415 DTNWRRGDLKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 469
Query: 113 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 169
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 470 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 524
Query: 170 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 225
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 525 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 581
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 582 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 636
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 342
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 637 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNK---NF 689
Query: 343 LVSGSSDHTIKVW 355
+++ S D T+K+W
Sbjct: 690 VITSSDDGTVKLW 702
Score = 143 (55.4 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 559 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 614
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 615 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 662
Query: 411 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 663 TGQCLQTLQGPHKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLRTGEFIR 711
Score = 129 (50.5 bits), Expect = 8.9e-21, Sum P(2) = 8.9e-21
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+D L VW G C GH G V S + ++ SGS D T++VW+
Sbjct: 447 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN----IIISGSTDRTLKVWNAE 502
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+C+ TL H S V M + ++S RD + +WD+ C
Sbjct: 503 TGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQC 546
Score = 97 (39.2 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 27 KGHKG-VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
KGH V++ + F + + SGSDD T++VW + KC+ TL H V S + +
Sbjct: 430 KGHDDHVITCLQFCGNR----IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 485
Query: 86 GSTLISAGRDKVVNLWDLRDYSC 108
+IS D+ + +W+ C
Sbjct: 486 --IIISGSTDRTLKVWNAETGEC 506
>UNIPROTKB|E2RI74 [details] [associations]
symbol:PLAA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016005 "phospholipase A2 activator activity"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0006954 GO:GO:0016005
GeneTree:ENSGT00550000074944 InterPro:IPR015155 InterPro:IPR013535
Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396
OMA:VSECCRF EMBL:AAEX03007920 Ensembl:ENSCAFT00000002660
Uniprot:E2RI74
Length = 800
Score = 279 (103.3 bits), Expect = 9.0e-21, P = 9.0e-21
Identities = 85/272 (31%), Positives = 131/272 (48%)
Query: 272 MSCSYVLAGHSEIVLCLDTCAL-SSGKILIVTGSKDNSVRLWDSESRCCVGVG-----TG 325
+SCS L GH V L C+L G + V S+D + RLW +SR G +G
Sbjct: 10 LSCS--LPGHELDVRGL-VCSLYPPGAFVSV--SRDRTTRLWVPDSRPNRGFTEMHCMSG 64
Query: 326 HMGAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGK 381
H V V S + + +G +DH I ++S E P L ++ H
Sbjct: 65 HSNFVSCVCIIPSSDMYPHGLIATGGNDHNICIFSL-------ESPAPLY---ILKGHKN 114
Query: 382 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 441
+ SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S
Sbjct: 115 TVCSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGS 171
Query: 442 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
DKTIK+W G C +TF GH V + L+ A+ +SC D ++ W + TGEC+
Sbjct: 172 ADKTIKLWKA--GRCERTFSGHEDCVRGLAILSE-AEFLSCANDASIRRWQI-TGECLEV 227
Query: 502 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
Y H + I++++V F T D + +W
Sbjct: 228 YYGHTNYIYSISVFPNCRDFVTTAEDRSLRIW 259
Score = 139 (54.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 313
+A N + ++ L S + Y+L GH V C+LSSGK +++GS D + ++W
Sbjct: 86 IATGGNDHNICIFSLESPAPLYILKGHKNTV-----CSLSSGKFGTLLSGSWDTTAKVWL 140
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
++ C+ GH AV AV + Q +++GS+D TIK+W
Sbjct: 141 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTIKLW 179
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 41/151 (27%), Positives = 72/151 (47%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVWDLLAKK 65
G D + ++ ++ + KGHK V S+ + K L SGS D T +VW L K
Sbjct: 90 GNDHNICIFSLESPAPLYILKGHKNTVCSL----SSGKFGTLLSGSWDTTAKVW--LNDK 143
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIP 125
C+ TL H + V ++ I + +++ DK + LW + C+ T +E + V +
Sbjct: 144 CMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLW--KAGRCERTFSGHE--DCVRGLA 199
Query: 126 PGSAFDSFLSSYNQQTIKKKR---RSLEIHF 153
S + FLS N +I++ + LE+++
Sbjct: 200 ILSEAE-FLSCANDASIRRWQITGECLEVYY 229
Score = 105 (42.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L++TGS D +++LW + RC +GH V +A + + FL S ++D +I+ W
Sbjct: 166 LMLTGSADKTIKLWKA-GRC-ERTFSGHEDCVRGLAILSEAE-FL-SCANDASIRRWQIT 221
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
G + V H I S++V PN T ++DR+ +W+ + T
Sbjct: 222 G-----------ECLEVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGECAQ--TI 268
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
R + IW +V+ AS D I++++ S+
Sbjct: 269 RLPAQSIWCCCVLDNGDIVVGAS-DGIIRVFTESE 302
Score = 92 (37.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 35/126 (27%), Positives = 55/126 (43%)
Query: 9 DRKVLVWDVDG----GFCT-HYFKGHKGVVSSILFHPDTDK---SLLFSGSDDATVRVWD 60
DR +W D GF H GH VS + P +D L+ +G +D + ++
Sbjct: 40 DRTTRLWVPDSRPNRGFTEMHCMSGHSNFVSCVCIIPSSDMYPHGLIATGGNDHNICIFS 99
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VE 119
L + + L H + V S++ G TL+S D +W L D C +T+ + V
Sbjct: 100 LESPAPLYILKGHKNTVCSLSSGKFG-TLLSGSWDTTAKVW-LND-KCMMTLQGHTAAVW 156
Query: 120 AVCAIP 125
AV +P
Sbjct: 157 AVKILP 162
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 265 (98.3 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 53/165 (32%), Positives = 86/165 (52%)
Query: 369 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 428
N K + H K I+S +P + T S D+T +W + ++ T GHK G+ +
Sbjct: 76 NYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135
Query: 429 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 488
+S + V++AS DKT+KI+ I KT +GH + V +F + + +VS D V
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 489 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
++W V+TG CI T H D + A++ + + A+G D LV +W
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Score = 249 (92.7 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 73/305 (23%), Positives = 145/305 (47%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ + I KF +YL ++ + V+++++ M C L GH L ++ A S
Sbjct: 83 LEGHTKSISSAKF-SPCGKYLGTSSADKTVKIWNMDHMICERTLTGHK---LGVNDIAWS 138
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
S +V+ S D ++++++ + GH V F+ + + +VSGS D ++++
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ-SSLVVSGSFDESVRI 197
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 414
W D + M +K + AH +++++ + SL+ +GS D +W +
Sbjct: 198 W-------DVKTGMCIKT---LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC 247
Query: 415 VVTFRGHKRG-IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS--VLRAS 471
+ T + + V+FSP + ++ ++ D T+K+W S G LK + GH +S + A+
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFAN 307
Query: 472 F-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGG--SDA 528
F +T G I+S D + +W ++T E + + H + A + A+G D
Sbjct: 308 FSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDN 367
Query: 529 LVNLW 533
+++W
Sbjct: 368 KIHIW 372
Score = 221 (82.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 74/332 (22%), Positives = 149/332 (44%)
Query: 166 NADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEK 225
N ++A S++ + ++ + ++A P + L +AD+ TV++
Sbjct: 63 NPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADK------TVKIWNM 116
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
+I + L G+ + D+ + + + + A++ + ++++++ + + L GH+ V
Sbjct: 117 D-HMICERTLTGHKLGVNDIAW-SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYV 174
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 345
C C + L+V+GS D SVR+WD ++ C+ H V AV+F++ + + S
Sbjct: 175 FC---CNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRD-GSLIAS 230
Query: 346 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 405
GS D +++W D A K +V + + +PN + + D T
Sbjct: 231 GSYDGLVRIW------DTANGQC---IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLK 281
Query: 406 VWRLPDLVSVVTFRGHKRGIWSV--EFSPVD-QVVITASGDKTIKIWSISDGSCLKTFEG 462
+W ++ + GH+ + + FS + +I+ S D I IW++ ++ EG
Sbjct: 282 LWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEG 341
Query: 463 HTSSVLRASFLTRGAQIVSCGA---DGLVKLW 491
HT VL AS I++ GA D + +W
Sbjct: 342 HTQPVL-ASDCHPVQNIIASGALEPDNKIHIW 372
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 42/142 (29%), Positives = 67/142 (47%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ +D K L ++++ T KGH V F+P + SL+ SGS D +VR+WD+
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS--SLVVSGSFDESVRIWDVK 201
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC-KLTVPTYEMVEAV 121
C+ TL H V++++ DGS + S D +V +WD + C K V A
Sbjct: 202 TGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAF 261
Query: 122 CAIPPGSAFDSFLSSYNQQTIK 143
P + L+S T+K
Sbjct: 262 VKFSPNGKY--ILASNLDSTLK 281
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
T GH + I S +FSP + + T+S DKT+KIW++ C +T GH V ++ +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 536
+VS D +K++ + T T H + ++ ++ + +G D V +W
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 537 T 537
T
Sbjct: 202 T 202
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD+ V +W++D C GHK V+ I + +D + S SDD T+++++++ +
Sbjct: 107 ADKTVKIWNMDHMICERTLTGHKLGVNDIAW--SSDSRCVVSASDDKTLKIFEIVTSRMT 164
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPP 126
TL H + V S ++S D+ V +WD++ C T+P + + V AV
Sbjct: 165 KTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRD 224
Query: 127 GSAFDSFLSSYN 138
GS S SY+
Sbjct: 225 GSLIAS--GSYD 234
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 68/310 (21%), Positives = 134/310 (43%)
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI 124
K + TL+ H ++S + G L ++ DK V +W++ C+ T+ +++ V I
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKL--GVNDI 135
Query: 125 PPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF 184
S +S+ + +T+K EI +T ++ N C S + +S
Sbjct: 136 AWSSDSRCVVSASDDKTLK----IFEI--VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSG 189
Query: 185 EMDDSKRGFTAAT-----VLPSNQGLLCVTA---DQQLLL---YT-TVEVPEKKMELILS 232
D+S R + T LP++ + + D L+ Y V + + +
Sbjct: 190 SFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIK 249
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQ-VQVYDLSSMSCSYVLAGHSEIVLCL-DT 290
+ N + +KF +Y+ +A+N++ ++++D S GH C+
Sbjct: 250 TLVDDENPPVAFVKF-SPNGKYI-LASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFAN 307
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--S 348
+++ GK I++GS+D + +W+ ++R V GH V A + +QN + SG+
Sbjct: 308 FSVTGGK-WIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA-SDCHPVQNIIASGALEP 365
Query: 349 DHTIKVWSFD 358
D+ I +W D
Sbjct: 366 DNKIHIWRSD 375
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 265 (98.3 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 53/165 (32%), Positives = 86/165 (52%)
Query: 369 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 428
N K + H K I+S +P + T S D+T +W + ++ T GHK G+ +
Sbjct: 76 NYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135
Query: 429 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 488
+S + V++AS DKT+KI+ I KT +GH + V +F + + +VS D V
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 489 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
++W V+TG CI T H D + A++ + + A+G D LV +W
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Score = 249 (92.7 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 73/305 (23%), Positives = 145/305 (47%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ + I KF +YL ++ + V+++++ M C L GH L ++ A S
Sbjct: 83 LEGHTKSISSAKF-SPCGKYLGTSSADKTVKIWNMDHMICERTLTGHK---LGVNDIAWS 138
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
S +V+ S D ++++++ + GH V F+ + + +VSGS D ++++
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ-SSLVVSGSFDESVRI 197
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 414
W D + M +K + AH +++++ + SL+ +GS D +W +
Sbjct: 198 W-------DVKTGMCIKT---LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC 247
Query: 415 VVTFRGHKRG-IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS--VLRAS 471
+ T + + V+FSP + ++ ++ D T+K+W S G LK + GH +S + A+
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFAN 307
Query: 472 F-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGG--SDA 528
F +T G I+S D + +W ++T E + + H + A + A+G D
Sbjct: 308 FSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDN 367
Query: 529 LVNLW 533
+++W
Sbjct: 368 KIHIW 372
Score = 221 (82.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 74/332 (22%), Positives = 149/332 (44%)
Query: 166 NADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEK 225
N ++A S++ + ++ + ++A P + L +AD+ TV++
Sbjct: 63 NPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADK------TVKIWNM 116
Query: 226 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 285
+I + L G+ + D+ + + + + A++ + ++++++ + + L GH+ V
Sbjct: 117 D-HMICERTLTGHKLGVNDIAW-SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYV 174
Query: 286 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 345
C C + L+V+GS D SVR+WD ++ C+ H V AV+F++ + + S
Sbjct: 175 FC---CNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRD-GSLIAS 230
Query: 346 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 405
GS D +++W D A K +V + + +PN + + D T
Sbjct: 231 GSYDGLVRIW------DTANGQC---IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLK 281
Query: 406 VWRLPDLVSVVTFRGHKRGIWSV--EFSPVD-QVVITASGDKTIKIWSISDGSCLKTFEG 462
+W ++ + GH+ + + FS + +I+ S D I IW++ ++ EG
Sbjct: 282 LWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEG 341
Query: 463 HTSSVLRASFLTRGAQIVSCGA---DGLVKLW 491
HT VL AS I++ GA D + +W
Sbjct: 342 HTQPVL-ASDCHPVQNIIASGALEPDNKIHIW 372
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 42/142 (29%), Positives = 67/142 (47%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ +D K L ++++ T KGH V F+P + SL+ SGS D +VR+WD+
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS--SLVVSGSFDESVRIWDVK 201
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC-KLTVPTYEMVEAV 121
C+ TL H V++++ DGS + S D +V +WD + C K V A
Sbjct: 202 TGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAF 261
Query: 122 CAIPPGSAFDSFLSSYNQQTIK 143
P + L+S T+K
Sbjct: 262 VKFSPNGKY--ILASNLDSTLK 281
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
T GH + I S +FSP + + T+S DKT+KIW++ C +T GH V ++ +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 536
+VS D +K++ + T T H + ++ ++ + +G D V +W
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 537 T 537
T
Sbjct: 202 T 202
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/132 (28%), Positives = 65/132 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD+ V +W++D C GHK V+ I + +D + S SDD T+++++++ +
Sbjct: 107 ADKTVKIWNMDHMICERTLTGHKLGVNDIAW--SSDSRCVVSASDDKTLKIFEIVTSRMT 164
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPP 126
TL H + V S ++S D+ V +WD++ C T+P + + V AV
Sbjct: 165 KTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRD 224
Query: 127 GSAFDSFLSSYN 138
GS S SY+
Sbjct: 225 GSLIAS--GSYD 234
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 68/310 (21%), Positives = 134/310 (43%)
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI 124
K + TL+ H ++S + G L ++ DK V +W++ C+ T+ +++ V I
Sbjct: 78 KLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKL--GVNDI 135
Query: 125 PPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF 184
S +S+ + +T+K EI +T ++ N C S + +S
Sbjct: 136 AWSSDSRCVVSASDDKTLK----IFEI--VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSG 189
Query: 185 EMDDSKRGFTAAT-----VLPSNQGLLCVTA---DQQLLL---YT-TVEVPEKKMELILS 232
D+S R + T LP++ + + D L+ Y V + + +
Sbjct: 190 SFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIK 249
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQ-VQVYDLSSMSCSYVLAGHSEIVLCL-DT 290
+ N + +KF +Y+ +A+N++ ++++D S GH C+
Sbjct: 250 TLVDDENPPVAFVKF-SPNGKYI-LASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFAN 307
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--S 348
+++ GK I++GS+D + +W+ ++R V GH V A + +QN + SG+
Sbjct: 308 FSVTGGK-WIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA-SDCHPVQNIIASGALEP 365
Query: 349 DHTIKVWSFD 358
D+ I +W D
Sbjct: 366 DNKIHIWRSD 375
>UNIPROTKB|A7Z055 [details] [associations]
symbol:PLAA "PLAA protein" species:9913 "Bos taurus"
[GO:0016005 "phospholipase A2 activator activity" evidence=IEA]
[GO:0006954 "inflammatory response" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0006954
GO:GO:0016005 GeneTree:ENSGT00550000074944 HOGENOM:HOG000174247
KO:K14018 InterPro:IPR015155 InterPro:IPR013535 Pfam:PF09070
Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396 CTD:9373
HOVERGEN:HBG008204 OMA:VSECCRF OrthoDB:EOG4DJJVW EMBL:DAAA02022139
EMBL:BC153253 IPI:IPI00692551 RefSeq:NP_001098805.1
UniGene:Bt.28480 STRING:A7Z055 Ensembl:ENSBTAT00000017298
GeneID:506073 KEGG:bta:506073 InParanoid:A7Z055 NextBio:20867436
Uniprot:A7Z055
Length = 796
Score = 278 (102.9 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 83/270 (30%), Positives = 131/270 (48%)
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVG--TGHM 327
+SCS L+GH V L C G + V S+D + RLW +S +R + +GH
Sbjct: 10 LSCS--LSGHELDVRGLVCCLYPPGAFVSV--SRDRTTRLWVPNSPNRGFTEMHCMSGHS 65
Query: 328 GAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
V V S + + +G +DH I V+S E P L V+ H +
Sbjct: 66 NFVSCVCIIPSSDVYPHGLIATGGNDHNICVFSL-------ESPAPLY---VLKGHKNTV 115
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S D
Sbjct: 116 CSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W G C +TF GH V + L+ + +SC D ++ W + TGEC+ +
Sbjct: 173 KTIKLWKA--GRCERTFSGHEDCVRGLAILSE-TEFLSCANDASIRRWQI-TGECLEVFY 228
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLW 533
H + I++++V + F T D + +W
Sbjct: 229 GHTNYIYSISVFPNCKDFVTTAEDRSLRIW 258
Score = 141 (54.7 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 36/102 (35%), Positives = 56/102 (54%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 313
+A N + V+ L S + YVL GH V C+LSSGK +++GS D + ++W
Sbjct: 85 IATGGNDHNICVFSLESPAPLYVLKGHKNTV-----CSLSSGKFGTLLSGSWDTTAKVWL 139
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
++ C+ GH AV AV + Q +++GS+D TIK+W
Sbjct: 140 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTIKLW 178
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 40/139 (28%), Positives = 66/139 (47%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVWDLLAKK 65
G D + V+ ++ + KGHK V S+ + K L SGS D T +VW L K
Sbjct: 89 GNDHNICVFSLESPAPLYVLKGHKNTVCSL----SSGKFGTLLSGSWDTTAKVW--LNDK 142
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIP 125
C+ TL H + V ++ I + +++ DK + LW + C+ T +E + V +
Sbjct: 143 CMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLW--KAGRCERTFSGHE--DCVRGLA 198
Query: 126 PGSAFDSFLSSYNQQTIKK 144
S + FLS N +I++
Sbjct: 199 ILSETE-FLSCANDASIRR 216
Score = 106 (42.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L++TGS D +++LW + RC +GH V +A + + FL S ++D +I+ W
Sbjct: 165 LMLTGSADKTIKLWKA-GRC-ERTFSGHEDCVRGLAILSETE-FL-SCANDASIRRWQIT 220
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
G + V H I S++V PN T ++DR+ +W+ + T
Sbjct: 221 G-----------ECLEVFYGHTNYIYSISVFPNCKDFVTTAEDRSLRIWKHGECAQ--TI 267
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
R + IW +V+ AS D I++++ S+
Sbjct: 268 RLPAQSIWCCCVLDNGDIVVGAS-DGIIRVFTESE 301
Score = 92 (37.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 9 DRKVLVW---DVDGGFCT-HYFKGHKGVVSSILFHPDTD---KSLLFSGSDDATVRVWDL 61
DR +W + GF H GH VS + P +D L+ +G +D + V+ L
Sbjct: 40 DRTTRLWVPNSPNRGFTEMHCMSGHSNFVSCVCIIPSSDVYPHGLIATGGNDHNICVFSL 99
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEA 120
+ + L H + V S++ G TL+S D +W L D C +T+ + V A
Sbjct: 100 ESPAPLYVLKGHKNTVCSLSSGKFG-TLLSGSWDTTAKVW-LND-KCMMTLQGHTAAVWA 156
Query: 121 VCAIP 125
V +P
Sbjct: 157 VKILP 161
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 264 (98.0 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 68/246 (27%), Positives = 114/246 (46%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
+L GH V A SSG +++ S+D S+R WD S + GH V + S
Sbjct: 355 ILRGHCGPVYSTRFLADSSG---LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS 411
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
+ SGS D T ++WSFD P+ + A H D++ + PN + +
Sbjct: 412 P-YSLYFASGSHDRTARLWSFD-----RTYPLR-----IYAGHLADVDCVKFHPNSNYLA 460
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
TGS D+T +W SV F GH+ + S+ FSP + + +A D+ +K+W ++ G+
Sbjct: 461 TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 520
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 516
K GHT ++ +F + I S D V++W +R C D ++ + G+
Sbjct: 521 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQ 580
Query: 517 KTEMFA 522
+ + +
Sbjct: 581 MSNVLS 586
Score = 235 (87.8 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 60/236 (25%), Positives = 114/236 (48%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K L G+ + +FL + L+ + ++ ++ +DL S + + + GH+ V LD
Sbjct: 354 KILRGHCGPVYSTRFLADSSGLLSCSEDMS-IRYWDLGSFTNTVLYQGHAYPVWDLD--- 409
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+S + +GS D + RLW + + + GH+ V V F N+L +GS+D T+
Sbjct: 410 ISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPN-SNYLATGSTDKTV 468
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
++WS A+Q +++ + H + SLA +PN + + +D+ +W L
Sbjct: 469 RLWS-------AQQGNSVR---LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 518
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 468
RGH I S+ FSP ++ +AS D ++++W I + C +G + ++
Sbjct: 519 TLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELV 574
Score = 232 (86.7 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 56/209 (26%), Positives = 89/209 (42%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH G V + F L+S S D +I+ W ++ + H +
Sbjct: 358 GHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNTV----------LYQGHAYPVW 406
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
L ++P +GS DRTA +W + + GH + V+F P + T S DK
Sbjct: 407 DLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 466
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
T+++WS G+ ++ F GH VL +F G + S G D +KLW + +G
Sbjct: 467 TVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 526
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLW 533
H D I +L + + A+ D V +W
Sbjct: 527 HTDNITSLTFSPDSSLIASASMDNSVRVW 555
Score = 181 (68.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 39/172 (22%), Positives = 74/172 (43%)
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGH 421
DD + + K ++ H + S + S + + S+D + W L + V ++GH
Sbjct: 343 DDEDDNAGTEMK-ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 401
Query: 422 KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVS 481
+W ++ SP + S D+T ++WS L+ + GH + V F + +
Sbjct: 402 AYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLAT 461
Query: 482 CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
D V+LW+ + G + + H + +LA + A+ G D + LW
Sbjct: 462 GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 513
Score = 157 (60.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +W G F GH+G V S+ F P+ L S +D +++WDL +
Sbjct: 465 DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG--KYLASAGEDQRLKLWDLASGTLYK 522
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
L H +TS+ + D S + SA D V +WD+R+ C
Sbjct: 523 ELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYC 562
Score = 149 (57.5 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 33/95 (34%), Positives = 47/95 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W D + + GH V + FHP+++ L +GS D TVR+W V
Sbjct: 423 DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN--YLATGSTDKTVRLWSAQQGNSVR 480
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H V S+A + +G L SAG D+ + LWDL
Sbjct: 481 LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDL 515
Score = 116 (45.9 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 35/113 (30%), Positives = 57/113 (50%)
Query: 232 SKRL-VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
S RL G+ +L L F +YLA A ++++++DL+S + L GH++ + L
Sbjct: 478 SVRLFTGHRGPVLSLAF-SPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSL-- 534
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFL 343
S LI + S DNSVR+WD + C G G + V ++ ++ N L
Sbjct: 535 -TFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGV-YTGQMSNVL 585
Score = 84 (34.6 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 36/148 (24%), Positives = 57/148 (38%)
Query: 16 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFS 75
D + G +GH G V S F D+ S L S S+D ++R WDL + H
Sbjct: 346 DDNAGTEMKILRGHCGPVYSTRFLADS--SGLLSCSEDMSIRYWDLGSFTNTVLYQGHAY 403
Query: 76 RVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGSAFDSFL 134
V + I+ S D+ LW D + L + + + C P S + +
Sbjct: 404 PVWDLDISPYSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATG 462
Query: 135 SSYNQQTIKKKRRSLEIHFITVGERGIV 162
S+ + ++ + T G RG V
Sbjct: 463 STDKTVRLWSAQQGNSVRLFT-GHRGPV 489
Score = 58 (25.5 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 65
C + F + ++++ PD+ LL +G D++ +++W L +KK
Sbjct: 278 CFYAFYNTEQLLNTAEISPDS--KLLAAGFDNSCIKLWSLRSKK 319
Score = 45 (20.9 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 76 RVTSMAITSDGSTLISAGRDK-VVNLWDLRDYSCK 109
++ + A S S L++AG D + LW LR K
Sbjct: 287 QLLNTAEISPDSKLLAAGFDNSCIKLWSLRSKKLK 321
Score = 45 (20.9 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 274 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 317
C Y ++ L+T +S L+ G ++ ++LW S+
Sbjct: 278 CFYAFYNTEQL---LNTAEISPDSKLLAAGFDNSCIKLWSLRSK 318
Score = 38 (18.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 338 KLQNFLVSGSSDHTIKV 354
+L+NFL S H+ +V
Sbjct: 94 RLRNFLTDSDSQHSHEV 110
>UNIPROTKB|F1SP81 [details] [associations]
symbol:PLAA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016005 "phospholipase A2 activator activity"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0006954 GO:GO:0016005
GeneTree:ENSGT00550000074944 InterPro:IPR015155 InterPro:IPR013535
Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396
OMA:VSECCRF EMBL:CU313306 EMBL:CU915318 Ensembl:ENSSSCT00000005651
Uniprot:F1SP81
Length = 804
Score = 276 (102.2 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 84/272 (30%), Positives = 131/272 (48%)
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVG--TGHM 327
+SCS L GH V L C G + V S+D + RLW DS +R + +GH
Sbjct: 14 LSCS--LPGHELDVRGLVCCLYPPGAFVSV--SRDRTTRLWVPDSPNRGFTEMHCMSGHS 69
Query: 328 GAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
V V S + + +G +DH I ++S E P L V+ H +
Sbjct: 70 NFVSCVCIIPSSDMYPHGLIATGGNDHNICIFSL-------ESPAPLY---VLKGHKNTV 119
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S D
Sbjct: 120 CSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGSAD 176
Query: 444 KTIKIWSISDGSCLKTFE--GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
KTIK+W G C +TF GH V + L+ + +SC D ++ W + TGEC+
Sbjct: 177 KTIKLWKA--GRCERTFSDIGHEDCVRGLAILSE-TEFLSCANDASIRKWQI-TGECLEV 232
Query: 502 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ H + I++++V + F T G D + +W
Sbjct: 233 FYGHTNYIYSISVFPNCKDFVTTGEDRSLRIW 264
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/102 (34%), Positives = 56/102 (54%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 313
+A N + ++ L S + YVL GH V C+LSSGK +++GS D + ++W
Sbjct: 89 IATGGNDHNICIFSLESPAPLYVLKGHKNTV-----CSLSSGKFGTLLSGSWDTTAKVWL 143
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
++ C+ GH AV AV + Q +++GS+D TIK+W
Sbjct: 144 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTIKLW 182
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 237 (88.5 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 67/227 (29%), Positives = 109/227 (48%)
Query: 308 SVRLWDSES-RCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQ 366
SVRLWD E+ + + G + A +AFS Q +L +G+ H KV F S E
Sbjct: 69 SVRLWDLENGKQIKSIDAGPVDA-WTLAFSPDSQ-YLATGT--HVGKVNIFGVESGKKEY 124
Query: 367 PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIW 426
++ + GK I S+A +P+ + +G+ D ++ + + T GH I
Sbjct: 125 SLDTR--------GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIR 176
Query: 427 SVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADG 486
S+ FSP Q+++TAS D IKI+ + + T GH S VL +F VS +D
Sbjct: 177 SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK 236
Query: 487 LVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
VK+W V T C+ T+ H+D++W + + G D ++++
Sbjct: 237 SVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 283
Score = 157 (60.3 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 49/200 (24%), Positives = 93/200 (46%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 309
+ QYLA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 99 DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 154
Query: 310 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 369
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 155 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 205
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
L ++ H + ++A P+D+ + S D++ VW + V TF H+ +W V+
Sbjct: 206 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVK 263
Query: 430 FSPVDQVVITASGDKTIKIW 449
++ +++ D+ I I+
Sbjct: 264 YNGNGSKIVSVGDDQEIHIY 283
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D + ++D+ G H +GH + S+ F PD+ LL + SDD ++++D+
Sbjct: 145 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQ 202
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
TL H S V ++A D + +S+ DK V +WD+ +C
Sbjct: 203 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 248
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 49/217 (22%), Positives = 87/217 (40%)
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAA------HGKDINS----- 385
K+ +V+GS D +KVW + D + + VV+ +GK I S
Sbjct: 29 KENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVRLWDLENGKQIKSIDAGP 88
Query: 386 -----LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 440
LA +P+ + TG+ ++ + + + I S+ +SP + + +
Sbjct: 89 VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 148
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 500
+ D I I+ I+ G L T EGH + +F +V+ DG +K++ V+
Sbjct: 149 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 208
Query: 501 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
T H + +A F + SD V +W T
Sbjct: 209 TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 245
Score = 126 (49.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++DV GH V ++ F PD D + S S D +V+VWD+ + CV
Sbjct: 193 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD-DTHFV-SSSSDKSVKVWDVGTRTCVH 250
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
T H +V + +GS ++S G D+ ++++D
Sbjct: 251 TFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 111 (44.1 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ I L F + Q L A++ +++YD+ + + L+GH+ VL + C
Sbjct: 168 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 226
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
+ V+ S D SV++WD +R CV H V V ++ +VS D I +
Sbjct: 227 TH---FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHI 282
Query: 355 W 355
+
Sbjct: 283 Y 283
Score = 77 (32.2 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 22/92 (23%), Positives = 43/92 (46%)
Query: 12 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 71
V +WD++ G ++ F PD+ L +G+ V ++ + + K +LD
Sbjct: 70 VRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQ--YLATGTHVGKVNIFGVESGKKEYSLD 127
Query: 72 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+ S+A + DG L S D ++N++D+
Sbjct: 128 TRGKFILSIAYSPDGKYLASGAIDGIINIFDI 159
Score = 50 (22.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 22/108 (20%), Positives = 48/108 (44%)
Query: 55 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT 114
+VR+WDL K + ++D ++A + D L + VN++ + + ++ T
Sbjct: 69 SVRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT 128
Query: 115 Y-EMVEAVCAIPPGS-----AFDSFLSSYNQQTIKKKRRSLEIHFITV 156
+ + ++ P G A D ++ ++ T K +LE H + +
Sbjct: 129 RGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHTLEGHAMPI 175
Score = 39 (18.8 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 85 DGSTLISAGRDKVVNLWDLRD 105
+ T+++ D +V +W RD
Sbjct: 31 NSETVVTGSLDDLVKVWKWRD 51
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 263 (97.6 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 66/240 (27%), Positives = 105/240 (43%)
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
SG + S D S+ R + GH G V + FS +F++S S+D TI++
Sbjct: 389 SGALQAENDSSDQSI---GPNGRRSYTLLLGHSGPVYSATFSPP-GDFVLSSSADTTIRL 444
Query: 355 WSFDGLSDDAEQPMNLKAKAVV-AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
WS L A V H + +P + S DRTA +W + +
Sbjct: 445 WS-----------TKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQ 493
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
+ GH + V++ P + T S DKT+++W + G C++ F GH S VL +
Sbjct: 494 PLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMS 553
Query: 474 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
G + S DG + +W + T CI H +W+L+ + + A+G +D V LW
Sbjct: 554 PDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 613
Score = 241 (89.9 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 65/220 (29%), Positives = 103/220 (46%)
Query: 275 SY-VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAV 333
SY +L GHS V + S +++ S D ++RLW ++ + GH V
Sbjct: 410 SYTLLLGHSGPVY---SATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDA 466
Query: 334 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 393
FS ++ S S D T ++WS D + QP+ ++A H D++ + PN +
Sbjct: 467 QFSP-FGHYFASCSHDRTARIWSMDRI-----QPLR-----IMAGHLSDVDCVQWHPNCN 515
Query: 394 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
+ TGS D+T +W + V F GH+ + S+ SP + + + D TI +W +S
Sbjct: 516 YIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST 575
Query: 454 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 493
C+ GH S V S+ G+ + S AD VKLW V
Sbjct: 576 ARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 230 (86.0 bits), Expect = 9.8e-17, Sum P(2) = 9.8e-17
Identities = 57/210 (27%), Positives = 95/210 (45%)
Query: 343 LVSGS-SDHTIKVWSFDGL-----------SDDAEQ---PMNLKAKAVVAAHGKDINSLA 387
LV+G SD +IKVW + +D ++Q P ++ ++ H + S
Sbjct: 366 LVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLLLGHSGPVYSAT 425
Query: 388 VAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIK 447
+P V + S D T +W ++V ++GH +W +FSP + S D+T +
Sbjct: 426 FSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTAR 485
Query: 448 IWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHED 507
IWS+ L+ GH S V + I + +D V+LW V+TGEC+ + H
Sbjct: 486 IWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRS 545
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ +LA+ A+G D + +W ST
Sbjct: 546 MVLSLAMSPDGRYMASGDEDGTIMMWDLST 575
Score = 189 (71.6 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 40/104 (38%), Positives = 57/104 (54%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
+D+ V +WDV G C F GH+ +V S+ PD + SG +D T+ +WDL +C+
Sbjct: 522 SDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDG--RYMASGDEDGTIMMWDLSTARCI 579
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLT 111
L H S V S++ + +GS L S D V LWD+ S KLT
Sbjct: 580 TPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS-STKLT 622
Score = 171 (65.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 43/180 (23%), Positives = 85/180 (47%)
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 363
S D + R+W + + + GH+ V V + N++ +GSSD T+++W D
Sbjct: 479 SHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNC-NYIATGSSDKTVRLW-------D 530
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKR 423
+ ++ + H + SLA++P+ + +G +D T +W L + GH
Sbjct: 531 VQTGECVR---IFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNS 587
Query: 424 GIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE--GHTSSVLRA--SFLTRGAQI 479
+WS+ +S ++ + S D T+K+W ++ + L E S+ LR+ +F T+ +
Sbjct: 588 CVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPV 647
Score = 159 (61.0 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 56/213 (26%), Positives = 95/213 (44%)
Query: 195 AATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQY 254
+AT P +L +AD + L++T + L+ K G+N + D +F Y
Sbjct: 423 SATFSPPGDFVLSSSADTTIRLWST----KLNANLVCYK---GHNYPVWDAQF-SPFGHY 474
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 314
A ++ +++ + + ++AGH V C+ + I TGS D +VRLWD
Sbjct: 475 FASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCN---YIATGSSDKTVRLWDV 531
Query: 315 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 374
++ CV + GH V ++A S ++ SG D TI +W LS +
Sbjct: 532 QTGECVRIFIGHRSMVLSLAMSPD-GRYMASGDEDGTIMMWD---LS-------TARCIT 580
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
+ H + SL+ + SL+ +GS D T +W
Sbjct: 581 PLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 613
Score = 151 (58.2 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W +D GH V + +HP+ + + +GS D TVR+WD+ +CV
Sbjct: 481 DRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCN--YIATGSSDKTVRLWDVQTGECVR 538
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
H S V S+A++ DG + S D + +WDL C
Sbjct: 539 IFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARC 578
Score = 96 (38.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 31/127 (24%), Positives = 51/127 (40%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
F L AD + +W +KGH V F P S S D T R+W +
Sbjct: 432 FVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH--YFASCSHDRTARIWSM 489
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC-KLTVPTYEMVEA 120
+ + + H S V + + + + + DK V LWD++ C ++ + MV +
Sbjct: 490 DRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLS 549
Query: 121 VCAIPPG 127
+ P G
Sbjct: 550 LAMSPDG 556
Score = 95 (38.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 236 VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSS 295
+G+ +L L + + +Y+A + ++DLS+ C L GH+ C+ + + S
Sbjct: 541 IGHRSMVLSLA-MSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNS---CVWSLSYSG 596
Query: 296 GKILIVTGSKDNSVRLWDSES 316
L+ +GS D +V+LWD S
Sbjct: 597 EGSLLASGSADCTVKLWDVTS 617
Score = 79 (32.9 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 20/76 (26%), Positives = 28/76 (36%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH G V S F P D + S S D T+R+W + H V + G
Sbjct: 416 GHSGPVYSATFSPPGD--FVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 88 TLISAGRDKVVNLWDL 103
S D+ +W +
Sbjct: 474 YFASCSHDRTARIWSM 489
Score = 59 (25.8 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 29 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
H G+ S + H D SL+ G D++++VWD+
Sbjct: 352 HNGLNCSSISH---DGSLVAGGFSDSSIKVWDM 381
Score = 43 (20.2 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 81 AITSDGSTLISAGRDKVVNLWDL 103
+I+ DGS + D + +WD+
Sbjct: 359 SISHDGSLVAGGFSDSSIKVWDM 381
Score = 43 (20.2 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 73 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
H V S + G ++S+ D + LW +
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWSTK 448
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 251 (93.4 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 77/286 (26%), Positives = 133/286 (46%)
Query: 249 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
G E ++ +V ++ + + L GH V+ +D S + + S D
Sbjct: 31 GSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGS---IAASSSLDAH 87
Query: 309 VRLWDSES-RCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 367
+RLWD E+ + + G + A ++AFS Q FL +GS H KV F G+ + ++
Sbjct: 88 IRLWDLETGKQIKSIDAGPVDA-WSLAFSPDSQ-FLATGS--HVGKVNIF-GV-ETGKKE 141
Query: 368 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWS 427
+L + GK I S+A +P+ + +G+ D ++ + + T GH I S
Sbjct: 142 YSLDTR------GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRS 195
Query: 428 VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGL 487
+ FSP Q+++TAS D IKI+ + + T GH S VL +F VS +D
Sbjct: 196 LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKS 255
Query: 488 VKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
VK+W T C+ T+ H+D++W + + G D ++++
Sbjct: 256 VKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 164 (62.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 58/245 (23%), Positives = 101/245 (41%)
Query: 295 SGKILIVTGSKDNSVRLW--DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+G +++GS D+ V++W + E GH V +V S + S S D I
Sbjct: 30 NGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHT-GSIAASSSLDAHI 88
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
++W D E +K+ + A D SLA +P+ + TGS ++ +
Sbjct: 89 RLW-------DLETGKQIKS---IDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETG 138
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 472
+ + I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 139 KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 532
+V+ DG +K++ V+ T H + +A F + SD V +
Sbjct: 199 SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKV 258
Query: 533 WHDST 537
W T
Sbjct: 259 WDAGT 263
Score = 155 (59.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 64/266 (24%), Positives = 113/266 (42%)
Query: 238 YNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEI---VLCLD----- 289
+N+E LDL++ E Q V+ +I SS +++ E + +D
Sbjct: 49 WNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVD 108
Query: 290 --TCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGT-GHMGAVGAVAFSKKLQNFLVS 345
+ A S + TGS V ++ E+ + + T G + ++A+S +L S
Sbjct: 109 AWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKF--ILSIAYSPD-GKYLAS 165
Query: 346 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 405
G+ D I + FD + K + H I SL +P+ L+ T S D
Sbjct: 166 GAIDGIINI--FDIATG--------KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK 215
Query: 406 VWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS 465
++ + T GH + +V F P D +++S DK++K+W +C+ TF H
Sbjct: 216 IYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQD 275
Query: 466 SVLRASFLTRGAQIVSCGADGLVKLW 491
V + G++IVS G D + ++
Sbjct: 276 QVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 144 (55.7 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D + ++D+ G H +GH + S+ F PD+ LL + SDD ++++D+
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQ 220
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
TL H S V ++A D + +S+ DK V +WD +C
Sbjct: 221 HANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTC 266
Score = 134 (52.2 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 35/121 (28%), Positives = 55/121 (45%)
Query: 419 RGHKRGIWSVEFSPV----DQVVITASGDKTIKIWSISDGSC-LK-TFEGHTSSVLRASF 472
+ H IWSV + + VI+ S D +K+W +D L+ T EGH V+
Sbjct: 13 QAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDI 72
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 532
G+ S D ++LW + TG+ I + D W+LA ++ ATG VN+
Sbjct: 73 SHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNI 132
Query: 533 W 533
+
Sbjct: 133 F 133
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++DV GH V ++ F PD D + S S D +V+VWD + CV
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPD-DTHFV-SSSSDKSVKVWDAGTRTCVH 268
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
T H +V + GS ++S G D+ ++++D
Sbjct: 269 TFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 113 (44.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ I L F + Q L A++ +++YD+ + + L+GH VL + C
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDD 244
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
+ V+ S D SV++WD+ +R CV H V V ++ +VS D I +
Sbjct: 245 TH---FVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSK-IVSVGDDQEIHI 300
Query: 355 W 355
+
Sbjct: 301 Y 301
Score = 84 (34.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD++ G S+ F PD+ L +GS V ++ + K
Sbjct: 85 DAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQ--FLATGSHVGKVNIFGVETGKKEY 142
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+LD + S+A + DG L S D ++N++D+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Score = 83 (34.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 37/153 (24%), Positives = 68/153 (44%)
Query: 11 KVLVWDVDGGFCTHYFKGHK-GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVAT 69
KV W+ + +GH+ GVVS + H S+ S S DA +R+WDL K + +
Sbjct: 45 KVWKWNDEKLDLQWTLEGHQLGVVSVDISHTG---SIAASSSLDAHIRLWDLETGKQIKS 101
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGS 128
+D S+A + D L + VN++ + + ++ T + + ++ P G
Sbjct: 102 IDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGK 161
Query: 129 -----AFDSFLSSYNQQTIKKKRRSLEIHFITV 156
A D ++ ++ T K +LE H + +
Sbjct: 162 YLASGAIDGIINIFDIAT-GKLLHTLEGHAMPI 193
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 251 (93.4 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 77/286 (26%), Positives = 133/286 (46%)
Query: 249 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
G E ++ +V ++ + + L GH V+ +D S + + S D
Sbjct: 31 GSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGS---IAASSSLDAH 87
Query: 309 VRLWDSES-RCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 367
+RLWD E+ + + G + A ++AFS Q FL +GS H KV F G+ + ++
Sbjct: 88 IRLWDLETGKQIKSIDAGPVDA-WSLAFSPDSQ-FLATGS--HVGKVNIF-GV-ETGKKE 141
Query: 368 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWS 427
+L + GK I S+A +P+ + +G+ D ++ + + T GH I S
Sbjct: 142 YSLDTR------GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRS 195
Query: 428 VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGL 487
+ FSP Q+++TAS D IKI+ + + T GH S VL +F VS +D
Sbjct: 196 LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKS 255
Query: 488 VKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
VK+W T C+ T+ H+D++W + + G D ++++
Sbjct: 256 VKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 163 (62.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 58/244 (23%), Positives = 100/244 (40%)
Query: 296 GKILIVTGSKDNSVRLW--DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
G +++GS D+ V++W + E GH V +V S + S S D I+
Sbjct: 31 GSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHT-GSIAASSSLDAHIR 89
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W D E +K+ + A D SLA +P+ + TGS ++ +
Sbjct: 90 LW-------DLETGKQIKS---IDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGK 139
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
+ + I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 140 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 474 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+V+ DG +K++ V+ T H + +A F + SD V +W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 534 HDST 537
T
Sbjct: 260 DAGT 263
Score = 144 (55.7 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D + ++D+ G H +GH + S+ F PD+ LL + SDD ++++D+
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQ 220
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
TL H S V ++A D + +S+ DK V +WD +C
Sbjct: 221 HANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTC 266
Score = 135 (52.6 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 419 RGHKRGIWSVEF--SPVD--QVVITASGDKTIKIWSISDGSC-LK-TFEGHTSSVLRASF 472
+ H IWSV + + D + VI+ S D +K+W +D L+ T EGH V+
Sbjct: 13 QAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDI 72
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 532
G+ S D ++LW + TG+ I + D W+LA ++ ATG VN+
Sbjct: 73 SHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNI 132
Query: 533 W 533
+
Sbjct: 133 F 133
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++DV GH V ++ F PD D + S S D +V+VWD + CV
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPD-DTHFV-SSSSDKSVKVWDAGTRTCVH 268
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
T H +V + GS ++S G D+ ++++D
Sbjct: 269 TFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYD 302
Score = 116 (45.9 bits), Expect = 0.00096, P = 0.00096
Identities = 61/285 (21%), Positives = 120/285 (42%)
Query: 85 DGS-TLISAGRDKVVNLWDLRDYSCKL--TVPTYEM------VEAVCAIPPGSAFDSFLS 135
DGS T+IS D +V +W D L T+ +++ + +I S+ D+ +
Sbjct: 30 DGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIR 89
Query: 136 SYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 195
++ +T K+ +S++ + ++ DS L F ++ K+ ++
Sbjct: 90 LWDLET-GKQIKSIDAGPVDAWSLA----FSPDSQFLATGSHVGKVNIFGVETGKKEYSL 144
Query: 196 ATVLPSNQGLLCV--TADQQLLLYTTVEVPEKKMELILSK---RLVGYNEEILDLKFLGE 250
T + +L + + D + L ++ ++ K L G+ I L F
Sbjct: 145 DT---RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF-SP 200
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 310
+ Q L A++ +++YD+ + + L+GH VL + C + V+ S D SV+
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTH---FVSSSSDKSVK 257
Query: 311 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
+WD+ +R CV H V V ++ +VS D I ++
Sbjct: 258 VWDAGTRTCVHTFFDHQDQVWGVKYNGSGSK-IVSVGDDQEIHIY 301
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 215 (80.7 bits), Expect = 8.9e-15, P = 8.9e-15
Identities = 70/272 (25%), Positives = 113/272 (41%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT--GHMGAVGAVA 334
+L+GH V C C + + D + +W+ C T GH GAV +
Sbjct: 51 LLSGHEGEVYC---CKFHPNGATLASSGYDRLILMWNVYGDC-ENYATLKGHSGAVMELH 106
Query: 335 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-S 393
++ + L S S+D T+ VW S+ E+ LK H +NS A
Sbjct: 107 YNTD-GSLLFSASTDKTVCVWD----SETGERVKRLKG------HTSFVNSCFPARRGPQ 155
Query: 394 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
L CTGS D T +W + SV TF+ + + SV F+ +I+ D IK+W +
Sbjct: 156 LACTGSDDGTVKLWDIRKKASVHTFQNTYQ-VLSVTFNDTSDQIISGGIDNDIKVWDLRQ 214
Query: 454 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH-- 505
+ + +GH SV S G+ ++S D V++W +R C+ + + H
Sbjct: 215 NKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNF 274
Query: 506 EDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
E + + A G +D V +W +T
Sbjct: 275 EKNLLRCSWSADGSKIAAGSADRFVYIWDTTT 306
Score = 179 (68.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 63/260 (24%), Positives = 113/260 (43%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
L GHS V+ L + G +L + S D +V +WDSE+ V GH V + ++
Sbjct: 95 LKGHSGAVMELHYN--TDGSLLF-SASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPAR 151
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--V 395
+ +GS D T+K+W +++ KA V L+V ND+ +
Sbjct: 152 RGPQLACTGSDDGTVKLW-------------DIRKKASVHTFQNTYQVLSVTFNDTSDQI 198
Query: 396 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
+G D VW L + + +GH + + S +++ S D ++++W I +
Sbjct: 199 ISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFA 258
Query: 456 ----CLKTFEGHT----SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHED 507
C+K F+G+ ++LR S+ G++I + AD V +W T + H
Sbjct: 259 PKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAG 318
Query: 508 KIWALAVGKKTEMFATGGSD 527
+ +A + + +G SD
Sbjct: 319 SVNEVAFHPEEPIVLSGSSD 338
Score = 177 (67.4 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 52/140 (37%), Positives = 66/140 (47%)
Query: 7 GADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK 64
G DR +L+W+V G C +Y KGH G V + H +TD SLLFS S D TV VWD
Sbjct: 75 GYDRLILMWNVYGD-CENYATLKGHSGAVMEL--HYNTDGSLLFSASTDKTVCVWDSETG 131
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWDLRDYSCKLTVPTYEMVEAVCA 123
+ V L H S V S G L G D V LWD+R K +V T++ V +
Sbjct: 132 ERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRK---KASVHTFQNTYQVLS 188
Query: 124 IPPGSAFDSFLSSYNQQTIK 143
+ D +S IK
Sbjct: 189 VTFNDTSDQIISGGIDNDIK 208
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 32/101 (31%), Positives = 56/101 (55%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V +WD+ H F+ V+S + F+ +D+ + SG D ++VWDL K +
Sbjct: 163 DGTVKLWDIRKKASVHTFQNTYQVLS-VTFNDTSDQ--IISGGIDNDIKVWDLRQNKLIY 219
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 109
++ H VT +++++DGS L+S D V +WD+R ++ K
Sbjct: 220 SMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPK 260
Score = 138 (53.6 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 37/152 (24%), Positives = 71/152 (46%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
I++G DN +++WD + GH +V ++ S ++L+S S D++++VW
Sbjct: 198 IISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSAD-GSYLLSNSMDNSVRVWDIRP 256
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+ E+ + + + V K++ + + + S + GS DR +W V
Sbjct: 257 FAPK-ERCVKI-FQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLP 314
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
GH + V F P + +V++ S DK + I I
Sbjct: 315 GHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEI 346
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 472
++ GH+ ++ +F P + ++ D+ I +W++ G C T +GH+ +V+ +
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVY-GDCENYATLKGHSGAVMELHY 107
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFA-TGGSDALVN 531
T G+ + S D V +W TGE + H + + ++ A TG D V
Sbjct: 108 NTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVK 167
Query: 532 LW 533
LW
Sbjct: 168 LW 169
Score = 108 (43.1 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSD 85
GH+G V FHP+ + L S D + +W++ C ATL H V + +D
Sbjct: 54 GHEGEVYCCKFHPNG--ATLASSGYDRLILMWNVYGD-CENYATLKGHSGAVMELHYNTD 110
Query: 86 GSTLISAGRDKVVNLWD 102
GS L SA DK V +WD
Sbjct: 111 GSLLFSASTDKTVCVWD 127
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 242 (90.2 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 64/250 (25%), Positives = 116/250 (46%)
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
+S L+ TGS D R+W + +G H G + A+ ++KK N+++S D T
Sbjct: 247 NSDGTLLATGSYDGFARIWTEDGNLASTLGQ-HKGPIFALKWNKK-GNYILSAGVDKTTI 304
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W D + +A+Q + A D++ N++ + S D V RL
Sbjct: 305 IW--DAHTGEAKQQFPFHS-----APALDVDW----QNNTTFASCSTDMCIHVCRLGCDR 353
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
V TF+GH + ++++ P ++ + S D T+KIWS+ +C+ + H+ + +
Sbjct: 354 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWS 413
Query: 474 TRGA---------QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 524
G + S D V+LW V G CI T KH++ ++++A + A+G
Sbjct: 414 PTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASG 473
Query: 525 GSDALVNLWH 534
D V++W+
Sbjct: 474 SFDKCVHIWN 483
Score = 168 (64.2 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 50/214 (23%), Positives = 93/214 (43%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH----G 380
GH V A++ + + L SGS D T ++W+ + S+ + L+ H
Sbjct: 180 GHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSN 238
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLP-DLVSVVTFRGHKRGIWSVEFSPVDQVVIT 439
KD+ SL + +L+ TGS D A +W +L S T HK I++++++ +++
Sbjct: 239 KDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLAS--TLGQHKGPIFALKWNKKGNYILS 296
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
A DKT IW G + F H++ L + SC D + + + +
Sbjct: 297 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDMCIHVCRLGCDRPV 355
Query: 500 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ H +++ A+ + A+ D + +W
Sbjct: 356 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 389
Score = 153 (58.9 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 39/166 (23%), Positives = 77/166 (46%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ--- 435
H ++N++ P+ L+ + S D T +W + V + H + I+++++SP
Sbjct: 361 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATS 420
Query: 436 ------VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
++ +AS D T+++W + G C+ T H V +F G + S D V
Sbjct: 421 NPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVH 480
Query: 490 LWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSDALVNL 532
+W ++G + +Y + I+ + A G K A+ GS +++L
Sbjct: 481 IWNTQSGSLVHSY-RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 525
Score = 140 (54.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 33/106 (31%), Positives = 51/106 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD-------TDKSLLFSGSDDATVRVWDL 61
D + +W + C H + H + +I + P +L S S D+TVR+WD+
Sbjct: 383 DMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDV 442
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
C+ TL KH V S+A + DG L S DK V++W+ + S
Sbjct: 443 ERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGS 488
Score = 123 (48.4 bits), Expect = 0.00042, P = 0.00042
Identities = 33/134 (24%), Positives = 60/134 (44%)
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CLKTFEGH---- 463
RGH+ ++ ++PV ++ + SGD T +IW++++ S C++ GH
Sbjct: 179 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE-GGHDVPS 237
Query: 464 TSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 523
V + + G + + DG ++WT G +T +H+ I+AL KK +
Sbjct: 238 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILS 296
Query: 524 GGSDALVNLWHDST 537
G D +W T
Sbjct: 297 AGVDKTTIIWDAHT 310
Score = 123 (48.4 bits), Expect = 0.00042, P = 0.00042
Identities = 52/200 (26%), Positives = 86/200 (43%)
Query: 348 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
++H+ K DG D E P + KA V+ H ++ A P L+ +GS D TA +W
Sbjct: 156 NNHS-KPMEIDG---DVEIPPS-KA-TVLRGHESEVFICAWNPVSDLLASGSGDSTARIW 209
Query: 408 RLPD--------LVSVVTFR--GH----KRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
L + LV R GH + + S++++ ++ T S D +IW+ D
Sbjct: 210 NLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-ED 268
Query: 454 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 513
G+ T H + + +G I+S G D +W TGE + H AL
Sbjct: 269 GNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAP--ALD 326
Query: 514 VG-KKTEMFATGGSDALVNL 532
V + FA+ +D +++
Sbjct: 327 VDWQNNTTFASCSTDMCIHV 346
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 48/158 (30%), Positives = 71/158 (44%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV-------T 78
F+GH V++I + P LL S SDD T+++W + CV L H + T
Sbjct: 358 FQGHTNEVNAIKWDPSG--MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 415
Query: 79 SMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGS-----AF 130
A ++ S ++ SA D V LWD+ C T+ + E V +V P G +F
Sbjct: 416 GPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSF 475
Query: 131 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRM-WNA 167
D + +N Q+ SL +H G GI + WNA
Sbjct: 476 DKCVHIWNTQS-----GSL-VHSYR-GTGGIFEVCWNA 506
Score = 88 (36.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
++D +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 247 NSDGTLLATGSYDGFARIWTEDGN-LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTII 305
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 306 WDAHTGEAKQQFP 318
Score = 76 (31.8 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-----------LAKKCVAT--LDKH 73
+GH+ V ++P +D LL SGS D+T R+W+L + + C+ D
Sbjct: 179 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 236
Query: 74 FSR-VTSMAITSDGSTLISAGRDKVVNLW 101
++ VTS+ SDG+ L + D +W
Sbjct: 237 SNKDVTSLDWNSDGTLLATGSYDGFARIW 265
Score = 37 (18.1 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 73 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
H S V A L S D +W+L + S
Sbjct: 181 HESEVFICAWNPVSDLLASGSGDSTARIWNLNENS 215
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 242 (90.2 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 64/250 (25%), Positives = 116/250 (46%)
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
+S L+ TGS D R+W + +G H G + A+ ++KK N+++S D T
Sbjct: 247 NSDGTLLATGSYDGFARIWTEDGNLASTLGQ-HKGPIFALKWNKK-GNYILSAGVDKTTI 304
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W D + +A+Q + A D++ N++ + S D V RL
Sbjct: 305 IW--DAHTGEAKQQFPFHS-----APALDVDW----QNNTTFASCSTDMCIHVCRLGCDR 353
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
V TF+GH + ++++ P ++ + S D T+KIWS+ +C+ + H+ + +
Sbjct: 354 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWS 413
Query: 474 TRGA---------QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 524
G + S D V+LW V G CI T KH++ ++++A + A+G
Sbjct: 414 PTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASG 473
Query: 525 GSDALVNLWH 534
D V++W+
Sbjct: 474 SFDKCVHIWN 483
Score = 168 (64.2 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 50/214 (23%), Positives = 93/214 (43%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH----G 380
GH V A++ + + L SGS D T ++W+ + S+ + L+ H
Sbjct: 180 GHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSN 238
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLP-DLVSVVTFRGHKRGIWSVEFSPVDQVVIT 439
KD+ SL + +L+ TGS D A +W +L S T HK I++++++ +++
Sbjct: 239 KDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLAS--TLGQHKGPIFALKWNKKGNYILS 296
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
A DKT IW G + F H++ L + SC D + + + +
Sbjct: 297 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDMCIHVCRLGCDRPV 355
Query: 500 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ H +++ A+ + A+ D + +W
Sbjct: 356 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 389
Score = 153 (58.9 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 39/166 (23%), Positives = 77/166 (46%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ--- 435
H ++N++ P+ L+ + S D T +W + V + H + I+++++SP
Sbjct: 361 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATS 420
Query: 436 ------VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
++ +AS D T+++W + G C+ T H V +F G + S D V
Sbjct: 421 NPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVH 480
Query: 490 LWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSDALVNL 532
+W ++G + +Y + I+ + A G K A+ GS +++L
Sbjct: 481 IWNTQSGSLVHSY-RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 525
Score = 140 (54.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 33/106 (31%), Positives = 51/106 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD-------TDKSLLFSGSDDATVRVWDL 61
D + +W + C H + H + +I + P +L S S D+TVR+WD+
Sbjct: 383 DMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDV 442
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
C+ TL KH V S+A + DG L S DK V++W+ + S
Sbjct: 443 ERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGS 488
Score = 123 (48.4 bits), Expect = 0.00042, P = 0.00042
Identities = 33/134 (24%), Positives = 60/134 (44%)
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CLKTFEGH---- 463
RGH+ ++ ++PV ++ + SGD T +IW++++ S C++ GH
Sbjct: 179 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE-GGHDVPS 237
Query: 464 TSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 523
V + + G + + DG ++WT G +T +H+ I+AL KK +
Sbjct: 238 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILS 296
Query: 524 GGSDALVNLWHDST 537
G D +W T
Sbjct: 297 AGVDKTTIIWDAHT 310
Score = 123 (48.4 bits), Expect = 0.00042, P = 0.00042
Identities = 52/200 (26%), Positives = 86/200 (43%)
Query: 348 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
++H+ K DG D E P + KA V+ H ++ A P L+ +GS D TA +W
Sbjct: 156 NNHS-KPMEIDG---DVEIPPS-KA-TVLRGHESEVFICAWNPVSDLLASGSGDSTARIW 209
Query: 408 RLPD--------LVSVVTFR--GH----KRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
L + LV R GH + + S++++ ++ T S D +IW+ D
Sbjct: 210 NLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-ED 268
Query: 454 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 513
G+ T H + + +G I+S G D +W TGE + H AL
Sbjct: 269 GNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAP--ALD 326
Query: 514 VG-KKTEMFATGGSDALVNL 532
V + FA+ +D +++
Sbjct: 327 VDWQNNTTFASCSTDMCIHV 346
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 48/158 (30%), Positives = 71/158 (44%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV-------T 78
F+GH V++I + P LL S SDD T+++W + CV L H + T
Sbjct: 358 FQGHTNEVNAIKWDPSG--MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 415
Query: 79 SMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGS-----AF 130
A ++ S ++ SA D V LWD+ C T+ + E V +V P G +F
Sbjct: 416 GPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSF 475
Query: 131 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRM-WNA 167
D + +N Q+ SL +H G GI + WNA
Sbjct: 476 DKCVHIWNTQS-----GSL-VHSYR-GTGGIFEVCWNA 506
Score = 88 (36.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
++D +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 247 NSDGTLLATGSYDGFARIWTEDGN-LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTII 305
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 306 WDAHTGEAKQQFP 318
Score = 76 (31.8 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-----------LAKKCVAT--LDKH 73
+GH+ V ++P +D LL SGS D+T R+W+L + + C+ D
Sbjct: 179 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 236
Query: 74 FSR-VTSMAITSDGSTLISAGRDKVVNLW 101
++ VTS+ SDG+ L + D +W
Sbjct: 237 SNKDVTSLDWNSDGTLLATGSYDGFARIW 265
Score = 37 (18.1 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 73 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
H S V A L S D +W+L + S
Sbjct: 181 HESEVFICAWNPVSDLLASGSGDSTARIWNLNENS 215
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 264 (98.0 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 68/246 (27%), Positives = 114/246 (46%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
VL GH V A SSG +++ S+D S+R WD S + GH V + S
Sbjct: 333 VLRGHCGPVYSTRFLADSSG---LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS 389
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
F S S D T ++WSFD P+ + A H D++ + PN + +
Sbjct: 390 PHSLYF-ASASHDRTARLWSFD-----RTYPLR-----IYAGHLADVDCVKFHPNSNYLA 438
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
TGS D+T +W SV F GH+ + S+ FSP + + +A D+ +K+W ++ G+
Sbjct: 439 TGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 498
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 516
K GHT ++ +F + + S D V++W +R+ C D ++ + G+
Sbjct: 499 YKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQ 558
Query: 517 KTEMFA 522
+ + +
Sbjct: 559 MSNVLS 564
Score = 233 (87.1 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 60/236 (25%), Positives = 112/236 (47%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K L G+ + +FL + L+ + ++ ++ +DL S + + + GH+ V LD
Sbjct: 332 KVLRGHCGPVYSTRFLADSSGLLSCSEDMS-IRYWDLGSFTNTVLYQGHAYPVWDLD--- 387
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+S + + S D + RLW + + + GH+ V V F N+L +GS+D T+
Sbjct: 388 ISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPN-SNYLATGSTDKTV 446
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
++WS +Q +++ + H + SLA +PN + + +D+ +W L
Sbjct: 447 RLWS-------TQQGNSVR---LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 496
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 468
RGH I S+ FSP +V +AS D ++++W I C +G +S ++
Sbjct: 497 TLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELV 552
Score = 228 (85.3 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 55/209 (26%), Positives = 89/209 (42%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH G V + F L+S S D +I+ W ++ + H +
Sbjct: 336 GHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNTV----------LYQGHAYPVW 384
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
L ++P+ + S DRTA +W + + GH + V+F P + T S DK
Sbjct: 385 DLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 444
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
T+++WS G+ ++ F GH VL +F G + S G D +KLW + +G
Sbjct: 445 TVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 504
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLW 533
H D I +L + + A+ D V +W
Sbjct: 505 HTDNITSLTFSPDSSLVASASMDNSVRVW 533
Score = 187 (70.9 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 41/172 (23%), Positives = 76/172 (44%)
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGH 421
DD + + + K V+ H + S + S + + S+D + W L + V ++GH
Sbjct: 321 DDEDDNLGTEMK-VLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 379
Query: 422 KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVS 481
+W ++ SP +AS D+T ++WS L+ + GH + V F + +
Sbjct: 380 AYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLAT 439
Query: 482 CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
D V+LW+ + G + + H + +LA + A+ G D + LW
Sbjct: 440 GSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 491
Score = 156 (60.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 32/100 (32%), Positives = 48/100 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +W G F GH+G V S+ F P+ L S +D +++WDL +
Sbjct: 443 DKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNG--KYLASAGEDQRLKLWDLASGTLYK 500
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
L H +TS+ + D S + SA D V +WD+R C
Sbjct: 501 ELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHC 540
Score = 149 (57.5 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 33/95 (34%), Positives = 47/95 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W D + + GH V + FHP+++ L +GS D TVR+W V
Sbjct: 401 DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN--YLATGSTDKTVRLWSTQQGNSVR 458
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H V S+A + +G L SAG D+ + LWDL
Sbjct: 459 LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDL 493
Score = 114 (45.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 232 SKRL-VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
S RL G+ +L L F +YLA A ++++++DL+S + L GH++ + L
Sbjct: 456 SVRLFTGHRGPVLSLAF-SPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSL-- 512
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCC-----------VGVGTGHMGAVGAVAF 335
S L+ + S DNSVR+WD S C VGV TG M V +V F
Sbjct: 513 -TFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQF 567
Score = 89 (36.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 35/137 (25%), Positives = 55/137 (40%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 86
+GH G V S F D+ S L S S+D ++R WDL + H V + I+
Sbjct: 335 RGHCGPVYSTRFLADS--SGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHS 392
Query: 87 STLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGSAFDSFLSSYNQQTIKKK 145
SA D+ LW D + L + + + C P S + + S+ +
Sbjct: 393 LYFASASHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWST 451
Query: 146 RRSLEIHFITVGERGIV 162
++ + T G RG V
Sbjct: 452 QQGNSVRLFT-GHRGPV 467
Score = 54 (24.1 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKK 65
D LL +G D++ +++W L +KK
Sbjct: 275 DSKLLAAGFDNSCIKLWSLRSKK 297
Score = 46 (21.3 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 76 RVTSMAITSDGSTLISAGRDK-VVNLWDLRDYSCK 109
++ + A S S L++AG D + LW LR K
Sbjct: 265 QLLNTAEVSPDSKLLAAGFDNSCIKLWSLRSKKLK 299
Score = 45 (20.9 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 271 SMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 317
S++ Y A ++ L L+T +S L+ G ++ ++LW S+
Sbjct: 251 SLTTIYFYAFYNTEQL-LNTAEVSPDSKLLAAGFDNSCIKLWSLRSK 296
Score = 38 (18.4 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 338 KLQNFLVSGSSDHTIKV 354
+L+NFL S H+ +V
Sbjct: 75 RLRNFLTDSDSQHSHEV 91
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 265 (98.3 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 75/303 (24%), Positives = 136/303 (44%)
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L + G+ + + + F +Q LA + + V+ + S +Y GH + V C++
Sbjct: 11 LERHFKGHRDAVTCVDFSINTKQ-LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNF 69
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
SG +L +GS+D +VR+W + V H V +V F Q+F V+ S D
Sbjct: 70 SP--SGHLL-ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF-VTASDDK 125
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
T+KVW+ K ++ H + +P+ L+ + S D+T +W
Sbjct: 126 TVKVWATH----------RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 175
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
V ++ H + V+F P + A D T+K+W + L+ ++ H+++V
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGL 235
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 530
SF G +++ +D +K+ + G + T H+ +A + E FA+GGSD V
Sbjct: 236 SFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 531 NLW 533
+W
Sbjct: 296 MVW 298
Score = 169 (64.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 38/159 (23%), Positives = 65/159 (40%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 438
H + + + N + +GS D VW + F GHK + V FSP ++
Sbjct: 18 HRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 439 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 498
+ S DKT++IW + F HT++V F + G V+ D VK+W +
Sbjct: 78 SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKF 137
Query: 499 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + +H + + + + D V LW S+
Sbjct: 138 LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSS 176
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/108 (33%), Positives = 55/108 (50%)
Query: 4 LLEGA-DRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
L G+ D+ V +W +V G + F+ H V S+ F D +S + + SDD TV+VW
Sbjct: 76 LASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSD-GQSFV-TASDDKTVKVWA 131
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+K + +L +H + V + DG ++SA DK V LWD C
Sbjct: 132 THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSREC 179
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWDV +++ H V+ + FHP + L + S D+T+++ DL+ +
Sbjct: 206 GMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGN--YLITASSDSTLKILDLMEGRL 263
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW----DLRDYSCKLTVP 113
+ TL H T++A + G S G D+ V +W D+ D+ VP
Sbjct: 264 LYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVTKVP 314
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D ++VW + + F GHK V+ + F P LL SGS D TVR+W
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH--LLASGSRDKTVRIWVPN 91
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
K H + V S+ SDG + ++A DK V +W
Sbjct: 92 VKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Score = 130 (50.8 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VW H V F PD L+ S SDD TV++WD +++CV
Sbjct: 124 DKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG--RLIVSASDDKTVKLWDKSSRECVH 181
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
+ +H VT + G+ + +AG D V +WD+R +
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 219
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 72/305 (23%), Positives = 121/305 (39%)
Query: 25 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 84
+FKGH+ V+ + F +T + L SGS D+ + VW + + H VT + +
Sbjct: 14 HFKGHRDAVTCVDFSINTKQ--LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 85 DGSTLISAGRDKVVNLW--DLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTI 142
G L S RDK V +W +++ S T V +V G SF+++ + +T+
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHT-ATVRSVHFCSDGQ---SFVTASDDKTV 127
Query: 143 KKKRRSLEIHFITVGER-GIVRM--WNADSACLYEQKSSDVTISFEMDDSKR-------- 191
K + ++ + VR ++ D L S D T+ D S R
Sbjct: 128 KVWATHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKL-WDKSSRECVHSYCE 185
Query: 192 --GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLG 249
GF T + + C+ A + TV+V + + +L + ++ + L F
Sbjct: 186 HGGFV--TYVDFHPSGTCIAAAG---MDNTVKVWDVRTHRLLQHYQL-HSAAVNGLSF-H 238
Query: 250 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 309
YL A++ +++ DL Y L GH T A S +G D V
Sbjct: 239 PSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPAT---TVAFSRTGEYFASGGSDEQV 295
Query: 310 RLWDS 314
+W S
Sbjct: 296 MVWKS 300
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 269 (99.8 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 61/221 (27%), Positives = 116/221 (52%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 272
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
A + +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 273 ----AGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 321
Query: 420 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 322 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 377
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 517
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 378 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 418
Score = 252 (93.8 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 256 VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 309
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 310 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 363
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 364 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 419
Query: 479 IVSCGADGLVKLWTVRT--------GE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 420 IVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 478
Query: 530 VNLW 533
+ +W
Sbjct: 479 L-IW 481
Score = 173 (66.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 74/284 (26%), Positives = 122/284 (42%)
Query: 134 LSSYNQQTIKKKRRS-LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 186
+S TIK +S LE I G G V D + SSD T+ EM
Sbjct: 218 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNAGEM 276
Query: 187 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 245
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 277 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 333
Query: 246 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 303
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 334 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 383
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 363
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 384 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLMAALDP 440
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
L + +V G+ + L ++ + + S D T +W
Sbjct: 441 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 481
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 270
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 271 VNAGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W+ ST
Sbjct: 329 AVNVVDFDDKYIVSASG--DRTIKVWNTST 356
Score = 132 (51.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 310
++Q + ++++D S++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 267
Query: 311 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 268 VWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 317
Query: 371 KAKAVVAAHGKDIN 384
+ V+ H +N
Sbjct: 318 TLRRVLVGHRAAVN 331
Score = 131 (51.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 54/213 (25%), Positives = 98/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ A + +
Sbjct: 223 DNTIKIWDKSTLECKRILTGHTGSVLCLQY----DERVIITGSSDSTVRVWDVNAGEMLN 278
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + + +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 279 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPT-DITLRRV-LVGHRAAVNVVD 334
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 335 FDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 389
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 390 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 421
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL+A
Sbjct: 385 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLMAALDP 440
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD-LRD 105
C+ TL +H RV + D ++S+ D + +WD L D
Sbjct: 441 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 486
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 249 (92.7 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 82/308 (26%), Positives = 145/308 (47%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K L G+ I +KF + LA A+ + + ++ ++ S + GHS + L A
Sbjct: 37 KTLEGHTAAISCVKF-SNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDL---A 92
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRC-CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHT 351
SS + S D ++R+WD+ S C+ V GH V V F+ N +VSGS D T
Sbjct: 93 WSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPP-SNLIVSGSFDET 151
Query: 352 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD 411
I++W + K ++ AH I+S+ + SL+ + S D + +W +
Sbjct: 152 IRIW----------EVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Query: 412 LVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV--L 468
+ T K S +FSP + ++ A+ D T+K+ + + G LK + GHT+ V +
Sbjct: 202 GTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCI 261
Query: 469 RASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK-KTEMFATGGS 526
++F +T G IVS D V LW ++ + + H D + +++ + E+ ++G
Sbjct: 262 TSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNH 321
Query: 527 -DALVNLW 533
D + +W
Sbjct: 322 LDKTIRIW 329
Score = 228 (85.3 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 66/216 (30%), Positives = 101/216 (46%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH A+ V FS N L S S D T+ +WS S L + H I+
Sbjct: 41 GHTAAISCVKFSND-GNLLASASVDKTMILWSATNYS--------LIHR--YEGHSSGIS 89
Query: 385 SLAVAPNDSLVCTGSQDRTACVW--RLP-DLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 441
LA + + C+ S D T +W R P + + V+ RGH ++ V F+P ++++ S
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVL--RGHTNFVFCVNFNPPSNLIVSGS 147
Query: 442 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
D+TI+IW + G C++ + H+ + F G+ IVS DG K+W + G C+ T
Sbjct: 148 FDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKT 207
Query: 502 YDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+DK A++ K F+ G LV DST
Sbjct: 208 LI--DDKSPAVSFAK----FSPNGKFILVATL-DST 236
Score = 168 (64.2 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 32/105 (30%), Positives = 56/105 (53%)
Query: 9 DRKVLVWDVDGGF-CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
D + +WD + C +GH V + F+P ++ L+ SGS D T+R+W++ KCV
Sbjct: 106 DCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN--LIVSGSFDETIRIWEVKTGKCV 163
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
+ H ++S+ DGS ++SA D +WD ++ +C T+
Sbjct: 164 RMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTL 208
Score = 153 (58.9 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 67/306 (21%), Positives = 122/306 (39%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 86
+GH +S + F D +LL S S D T+ +W + + H S ++ +A +SD
Sbjct: 40 EGHTAAISCVKF--SNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 87 STLISAGRDKVVNLWDLRD-YSC-KLTVPTYEMVEAVCAIPPGS-----AFDSFLSSYNQ 139
SA D + +WD R Y C K+ V V PP + +FD + +
Sbjct: 98 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Query: 140 QTIKK----KRRSLEIHFITVGERG-IVRMWNADSACLYEQKSSDVTISFEMDDSKRGFT 194
+T K K S+ I + G ++ + D +C + +DD +
Sbjct: 158 KTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVS 217
Query: 195 AATVLPSNQGLLCVTADQQLLL--YTTVEVPEKKMELILSKRLVGYNEEILDLK--FLGE 250
A P+ + +L T D L L Y T + K G+ ++ + F
Sbjct: 218 FAKFSPNGKFILVATLDSTLKLSNYATGK---------FLKVYTGHTNKVFCITSAFSVT 268
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 310
+Y+ + V ++DL + + L GH++ V+ + +C +I D ++R
Sbjct: 269 NGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISV-SCHPVQNEISSSGNHLDKTIR 327
Query: 311 LWDSES 316
+W ++
Sbjct: 328 IWKQDA 333
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/122 (24%), Positives = 59/122 (48%)
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
T GH I V+FS ++ +AS DKT+ +WS ++ S + +EGH+S + ++ +
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 477 AQIVSCGADGLVKLWTVRTG-ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHD 535
S D +++W R+ EC+ H + ++ + + + +G D + +W
Sbjct: 98 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Query: 536 ST 537
T
Sbjct: 158 KT 159
Score = 129 (50.5 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 24/110 (21%), Positives = 53/110 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK-KCV 67
D+ +++W H ++GH +S + + D+ + S SDD T+R+WD + +C+
Sbjct: 64 DKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTC--SASDDCTLRIWDARSPYECL 121
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM 117
L H + V + + ++S D+ + +W+++ C + + M
Sbjct: 122 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSM 171
Score = 124 (48.7 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 34/109 (31%), Positives = 62/109 (56%)
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC-ALSSGKILIVTGSKDNSVRL 311
+++ VAT +++ + ++ V GH+ V C+ + ++++GK IV+GS+DN V L
Sbjct: 226 KFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKY-IVSGSEDNCVYL 284
Query: 312 WDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSS--DHTIKVWSFD 358
WD ++R + GH AV +V+ +QN + S + D TI++W D
Sbjct: 285 WDLQARNILQRLEGHTDAVISVS-CHPVQNEISSSGNHLDKTIRIWKQD 332
Score = 74 (31.1 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
TL+ H + ++ + ++DG+ L SA DK + LW +YS
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYS 76
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 240 (89.5 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 64/250 (25%), Positives = 116/250 (46%)
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
+S L+ TGS D R+W + +G H G + A+ ++KK N+++S D T
Sbjct: 243 NSDGTLLATGSYDGFARIWTEDGNLASTLGQ-HKGPIFALKWNKK-GNYILSAGVDKTTI 300
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W D + +A+Q + A D++ N++ + S D V RL
Sbjct: 301 IW--DAHTGEAKQQFPFHS-----APALDVDW----QNNTTFASCSTDMCIHVCRLGCDR 349
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
V TF+GH + ++++ P ++ + S D T+KIWS+ +C+ + H+ + +
Sbjct: 350 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWS 409
Query: 474 TRGA---------QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 524
G + S D V+LW V G CI T KH++ ++++A + A+G
Sbjct: 410 PTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASG 469
Query: 525 GSDALVNLWH 534
D V++W+
Sbjct: 470 SFDKCVHIWN 479
Score = 169 (64.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 50/214 (23%), Positives = 93/214 (43%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH----G 380
GH V A++ + + L SGS D T ++W+ + S+ + L+ H
Sbjct: 176 GHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPSN 234
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLP-DLVSVVTFRGHKRGIWSVEFSPVDQVVIT 439
KD+ SL + +L+ TGS D A +W +L S T HK I++++++ +++
Sbjct: 235 KDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLAS--TLGQHKGPIFALKWNKKGNYILS 292
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
A DKT IW G + F H++ L + SC D + + + +
Sbjct: 293 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDMCIHVCRLGCDRPV 351
Query: 500 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ H +++ A+ + A+ D + +W
Sbjct: 352 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 385
Score = 152 (58.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 39/166 (23%), Positives = 77/166 (46%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ--- 435
H ++N++ P+ L+ + S D T +W + V + H + I+++++SP
Sbjct: 357 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTS 416
Query: 436 ------VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
++ +AS D T+++W + G C+ T H V +F G + S D V
Sbjct: 417 NPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVH 476
Query: 490 LWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSDALVNL 532
+W ++G + +Y + I+ + A G K A+ GS +++L
Sbjct: 477 IWNTQSGTLVHSY-RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 521
Score = 138 (53.6 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD-------TDKSLLFSGSDDATVRVWDL 61
D + +W + C H + H + +I + P +L S S D+TVR+WD+
Sbjct: 379 DMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDV 438
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL KH V S+A + DG L S DK V++W+
Sbjct: 439 DRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN 479
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 53/200 (26%), Positives = 86/200 (43%)
Query: 348 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
++H+ K DG D E P N KA V+ H ++ A P L+ +GS D TA +W
Sbjct: 152 NNHS-KPMEIDG---DVEIPPN-KA-TVLRGHESEVFICAWNPVSDLLASGSGDSTARIW 205
Query: 408 RLPD--------LVSVVTFR--GH----KRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
L + LV R GH + + S++++ ++ T S D +IW+ D
Sbjct: 206 NLNENSNSGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-ED 264
Query: 454 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 513
G+ T H + + +G I+S G D +W TGE + H AL
Sbjct: 265 GNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAP--ALD 322
Query: 514 VG-KKTEMFATGGSDALVNL 532
V + FA+ +D +++
Sbjct: 323 VDWQNNTTFASCSTDMCIHV 342
Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
Identities = 35/143 (24%), Positives = 65/143 (45%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CLK 458
P+ +V+ RGH+ ++ ++PV ++ + SGD T +IW++++ S C++
Sbjct: 168 PNKATVL--RGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIR 225
Query: 459 TFEGH----TSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 514
GH V + + G + + DG ++WT G +T +H+ I+AL
Sbjct: 226 E-GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKW 283
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
KK + G D +W T
Sbjct: 284 NKKGNYILSAGVDKTTIIWDAHT 306
Score = 88 (36.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
++D +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 243 NSDGTLLATGSYDGFARIWTEDGN-LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTII 301
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 302 WDAHTGEAKQQFP 314
Score = 76 (31.8 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-----------LAKKCVAT--LDKH 73
+GH+ V ++P +D LL SGS D+T R+W+L + + C+ D
Sbjct: 175 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVP 232
Query: 74 FSR-VTSMAITSDGSTLISAGRDKVVNLW 101
++ VTS+ SDG+ L + D +W
Sbjct: 233 SNKDVTSLDWNSDGTLLATGSYDGFARIW 261
Score = 37 (18.1 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 73 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
H S V A L S D +W+L + S
Sbjct: 177 HESEVFICAWNPVSDLLASGSGDSTARIWNLNENS 211
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 240 (89.5 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 63/250 (25%), Positives = 116/250 (46%)
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
+S L+ TGS D R+W + +G H G + A+ ++KK N+++S D T
Sbjct: 248 NSDGTLLATGSYDGFARIWTEDGNLASTLGQ-HKGPIFALKWNKK-GNYILSAGVDKTTI 305
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W D + +A+Q + A D++ N++ + S D V RL
Sbjct: 306 IW--DAHTGEAKQQFPFHS-----APALDVDW----QNNTTFASCSTDMCIHVCRLGCDR 354
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
V TF+GH + ++++ P ++ + S D T+KIWS+ +C+ + H+ + +
Sbjct: 355 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWS 414
Query: 474 TRGA---------QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 524
G + S D V+LW V G C+ T KH++ ++++A + A+G
Sbjct: 415 PTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASG 474
Query: 525 GSDALVNLWH 534
D V++W+
Sbjct: 475 SFDKCVHIWN 484
Score = 168 (64.2 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 50/214 (23%), Positives = 93/214 (43%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH----G 380
GH V A++ + + L SGS D T ++W+ + S+ + L+ H
Sbjct: 181 GHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSN 239
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLP-DLVSVVTFRGHKRGIWSVEFSPVDQVVIT 439
KD+ SL + +L+ TGS D A +W +L S T HK I++++++ +++
Sbjct: 240 KDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLAS--TLGQHKGPIFALKWNKKGNYILS 297
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
A DKT IW G + F H++ L + SC D + + + +
Sbjct: 298 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDMCIHVCRLGCDRPV 356
Query: 500 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ H +++ A+ + A+ D + +W
Sbjct: 357 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 390
Score = 155 (59.6 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 40/166 (24%), Positives = 77/166 (46%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ--- 435
H ++N++ P+ L+ + S D T +W + V + H + I+++++SP
Sbjct: 362 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATS 421
Query: 436 ------VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
++ +AS D T+++W + G CL T H V +F G + S D V
Sbjct: 422 NPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVH 481
Query: 490 LWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSDALVNL 532
+W ++G + +Y + I+ + A G K A+ GS +++L
Sbjct: 482 IWNTQSGSLVHSY-RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 526
Score = 139 (54.0 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHP------DTDKSLLF-SGSDDATVRVWDL 61
D + +W + C H + H + +I + P + + S++ S S D+TVR+WD+
Sbjct: 384 DMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDV 443
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
C+ TL KH V S+A + DG L S DK V++W+ + S
Sbjct: 444 ERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGS 489
Score = 123 (48.4 bits), Expect = 0.00042, P = 0.00042
Identities = 33/134 (24%), Positives = 60/134 (44%)
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CLKTFEGH---- 463
RGH+ ++ ++PV ++ + SGD T +IW++++ S C++ GH
Sbjct: 180 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE-GGHDVPS 238
Query: 464 TSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 523
V + + G + + DG ++WT G +T +H+ I+AL KK +
Sbjct: 239 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILS 297
Query: 524 GGSDALVNLWHDST 537
G D +W T
Sbjct: 298 AGVDKTTIIWDAHT 311
Score = 123 (48.4 bits), Expect = 0.00042, P = 0.00042
Identities = 52/200 (26%), Positives = 86/200 (43%)
Query: 348 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
++H+ K DG D E P + KA V+ H ++ A P L+ +GS D TA +W
Sbjct: 157 NNHS-KPMEIDG---DVEIPPS-KA-TVLRGHESEVFICAWNPVSDLLASGSGDSTARIW 210
Query: 408 RLPD--------LVSVVTFR--GH----KRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
L + LV R GH + + S++++ ++ T S D +IW+ D
Sbjct: 211 NLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-ED 269
Query: 454 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 513
G+ T H + + +G I+S G D +W TGE + H AL
Sbjct: 270 GNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAP--ALD 327
Query: 514 VG-KKTEMFATGGSDALVNL 532
V + FA+ +D +++
Sbjct: 328 VDWQNNTTFASCSTDMCIHV 347
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00054
Identities = 48/158 (30%), Positives = 72/158 (45%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV-------T 78
F+GH V++I + P LL S SDD T+++W + CV L H + T
Sbjct: 359 FQGHTNEVNAIKWDPSG--MLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPT 416
Query: 79 SMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGS-----AF 130
A ++ S+++ SA D V LWD+ C T+ + E V +V P G +F
Sbjct: 417 GPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSF 476
Query: 131 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRM-WNA 167
D + +N Q+ SL +H G GI + WNA
Sbjct: 477 DKCVHIWNTQS-----GSL-VHSYR-GTGGIFEVCWNA 507
Score = 88 (36.0 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
++D +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 248 NSDGTLLATGSYDGFARIWTEDGN-LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTII 306
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 307 WDAHTGEAKQQFP 319
Score = 76 (31.8 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-----------LAKKCVAT--LDKH 73
+GH+ V ++P +D LL SGS D+T R+W+L + + C+ D
Sbjct: 180 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 237
Query: 74 FSR-VTSMAITSDGSTLISAGRDKVVNLW 101
++ VTS+ SDG+ L + D +W
Sbjct: 238 SNKDVTSLDWNSDGTLLATGSYDGFARIW 266
Score = 37 (18.1 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 73 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
H S V A L S D +W+L + S
Sbjct: 182 HESEVFICAWNPVSDLLASGSGDSTARIWNLNENS 216
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 260 (96.6 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 67/235 (28%), Positives = 101/235 (42%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
LI S D R+ D ++ + GH G V V+FS +N+L+S S D TI++WS
Sbjct: 471 LIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPD-RNYLLSSSEDGTIRLWSLQ 529
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+ H + +P +G DR A +W + F
Sbjct: 530 TFT----------CLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIF 579
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH + F P V T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 580 AGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKF 639
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ S DG V LW + G IA H I+AL + E+ A+G D V LW
Sbjct: 640 LASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLW 694
Score = 255 (94.8 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 73/242 (30%), Positives = 118/242 (48%)
Query: 265 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG- 323
++ D + S S +L GHS V + + S + +++ S+D ++RLW ++ C+ VG
Sbjct: 482 RIMDEKTSSESKILHGHSGPVYGV---SFSPDRNYLLSSSEDGTIRLWSLQTFTCL-VGY 537
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
GH V FS + VSG D ++W+ D QP+ + A H D+
Sbjct: 538 KGHNYPVWDTQFSP-FGYYFVSGGHDRVARLWATDHY-----QPLR-----IFAGHLADV 586
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
PN + V TGS DRT +W + + V F GHK I S+ FSP + + + S D
Sbjct: 587 TCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTD 646
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLWTV-RTGECIAT 501
+ +W I G + +GHT ++ F +R +I++ G+ D V+LW V R + + T
Sbjct: 647 GRVLLWDIGHGLMIAELKGHTGTIYALKF-SRDGEIIASGSIDNTVRLWDVMRAIDDVET 705
Query: 502 YD 503
D
Sbjct: 706 DD 707
Score = 208 (78.3 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 53/220 (24%), Positives = 102/220 (46%)
Query: 232 SKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC 291
SK L G++ + + F + YL ++ ++++ L + +C GH+ V DT
Sbjct: 492 SKILHGHSGPVYGVSF-SPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVW--DT- 547
Query: 292 ALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHT 351
S V+G D RLW ++ + + GH+ V F N++ +GSSD T
Sbjct: 548 QFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPN-SNYVATGSSDRT 606
Query: 352 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD 411
+++W +N + H I+SLA +PN + +GS D +W +
Sbjct: 607 VRLWDV----------LNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGH 656
Query: 412 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
+ + +GH I++++FS +++ + S D T+++W +
Sbjct: 657 GLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 168 (64.2 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 35/96 (36%), Positives = 49/96 (51%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
+DR V +WDV G C F GHKG + S+ F P+ L SGS D V +WD+ +
Sbjct: 603 SDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNG--KFLASGSTDGRVLLWDIGHGLMI 660
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
A L H + ++ + DG + S D V LWD+
Sbjct: 661 AELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 147 (56.8 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G DR +W D F GH V+ FHP+++ + +GS D TVR+WD+L C
Sbjct: 560 GHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN--YVATGSSDRTVRLWDVLNGNC 617
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
V H + S+A + +G L S D V LWD+
Sbjct: 618 VRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDI 654
Score = 134 (52.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSVRLW 312
Y+A ++ V+++D+ + +C + GH + L A S +GK L +GS D V LW
Sbjct: 597 YVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSL---AFSPNGKFL-ASGSTDGRVLLW 652
Query: 313 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAE 365
D + GH G + A+ FS+ + + SGS D+T+++W DD E
Sbjct: 653 DIGHGLMIAELKGHTGTIYALKFSRDGE-IIASGSIDNTVRLWDVMRAIDDVE 704
Score = 122 (48.0 bits), Expect = 0.00088, P = 0.00088
Identities = 36/143 (25%), Positives = 59/143 (41%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+ SL+ G D T VW VT + ++ + + + +D+ S D +I
Sbjct: 437 DSSLIAGGFADSTVRVWS-------VTPKKLRKVKSAADLNLIDK----ESDDVLERIMD 485
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
S K GH+ V SF ++S DG ++LW+++T C+ Y H +W
Sbjct: 486 EKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVW 545
Query: 511 ALAVGKKTEMFATGGSDALVNLW 533
F +GG D + LW
Sbjct: 546 DTQFSPFGYYFVSGGHDRVARLW 568
Score = 121 (47.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 30/104 (28%), Positives = 44/104 (42%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH G V + F PD ++ L S S+D T+R+W L C+ H V + G
Sbjct: 497 GHSGPVYGVSFSPD--RNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGY 554
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGSAF 130
+S G D+V LW Y L + + + C P S +
Sbjct: 555 YFVSGGHDRVARLWATDHYQ-PLRIFAGHLADVTCTRFHPNSNY 597
Score = 81 (33.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 18/66 (27%), Positives = 31/66 (46%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
D +L+ SDD R+ D L H V ++ + D + L+S+ D + LW
Sbjct: 468 DLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWS 527
Query: 103 LRDYSC 108
L+ ++C
Sbjct: 528 LQTFTC 533
Score = 61 (26.5 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKK 65
D SL+ G D+TVRVW + KK
Sbjct: 437 DSSLIAGGFADSTVRVWSVTPKK 459
Score = 54 (24.1 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 41 DTDK--SLLFSGSDDATVRVW-DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDK 96
D+DK +++ +R+ + L C T + +T++ T D S+LI+ G D
Sbjct: 390 DSDKLDKIMYMKESTKRIRLGPETLPSICFYTFLNAYQGLTAVDFTDD-SSLIAGGFADS 448
Query: 97 VVNLWDL 103
V +W +
Sbjct: 449 TVRVWSV 455
Score = 38 (18.4 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 299 LIVTGSKDNSVRLW 312
LI G D++VR+W
Sbjct: 440 LIAGGFADSTVRVW 453
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 272 (100.8 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 81/308 (26%), Positives = 142/308 (46%)
Query: 243 LDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD---TCALSSG--- 296
LDLK ++ + A ++ +Q+ L S+ C Y ++ + CLD C +++
Sbjct: 429 LDLKLEIQKVKESRDAIKLDNLQLA-LPSV-CMYTFQNTNKDMSCLDFSDDCRIAAAGFQ 486
Query: 297 ----KILIVTGSKDNSVRLW------DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
KI + GS N+ + D + C VG H G V + +FS +L+SG
Sbjct: 487 DSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVG--HSGTVYSTSFSPD-NKYLLSG 543
Query: 347 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 406
S D T+++WS D + A H + ++ +P T S D+TA +
Sbjct: 544 SEDKTVRLWSMDTHT----------ALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARL 593
Query: 407 WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 466
W + + F GH + V F P V T S DKT ++W +S G ++ F GHT+
Sbjct: 594 WSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAP 653
Query: 467 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKH-EDKIWALAVGKKTEMFATGG 525
V+ + G + + DG++ +W + TG+ + H ++ I++L+ K+ + +GG
Sbjct: 654 VISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGG 713
Query: 526 SDALVNLW 533
+D V +W
Sbjct: 714 ADHTVRVW 721
Score = 272 (100.8 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 56/200 (28%), Positives = 100/200 (50%)
Query: 345 SGSSDHTIKVWSFDGLS-DDAEQPMNLKAK------AVVAAHGKDINSLAVAPNDSLVCT 397
+G D IK+WS DG S ++ +N K + H + S + +P++ + +
Sbjct: 483 AGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLS 542
Query: 398 GSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCL 457
GS+D+T +W + ++V+++GH +W V FSP+ TAS D+T ++WS L
Sbjct: 543 GSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPL 602
Query: 458 KTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 517
+ F GH + V SF G + + +D ++W V TG+ + + H + ++AV
Sbjct: 603 RIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPD 662
Query: 518 TEMFATGGSDALVNLWHDST 537
+TG D ++N+W T
Sbjct: 663 GRWLSTGSEDGIINVWDIGT 682
Score = 250 (93.1 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 68/223 (30%), Positives = 107/223 (47%)
Query: 273 SCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGA 332
+C L GHS V T K L+ +GS+D +VRLW ++ + GH V
Sbjct: 517 TCK-TLVGHSGTVY--STSFSPDNKYLL-SGSEDKTVRLWSMDTHTALVSYKGHNHPVWD 572
Query: 333 VAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND 392
V+FS L ++ + S D T ++WS D + P+ + A H D++ ++ PN
Sbjct: 573 VSFSP-LGHYFATASHDQTARLWSCDHI-----YPLR-----IFAGHLNDVDCVSFHPNG 621
Query: 393 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
V TGS D+T +W + SV F GH + S+ P + + T S D I +W I
Sbjct: 622 CYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIG 681
Query: 453 DGSCLKTFEGH-TSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
G LK GH +++ S+ G ++S GAD V++W ++
Sbjct: 682 TGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLK 724
Score = 186 (70.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 54/220 (24%), Positives = 100/220 (45%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K LVG++ + F + +YL + + V+++ + + + GH+ V +
Sbjct: 519 KTLVGHSGTVYSTSF-SPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSP 577
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
L T S D + RLW + + + GH+ V V+F ++ +GSSD T
Sbjct: 578 LGH---YFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPN-GCYVFTGSSDKTC 633
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
++W D + D+ + + H + S+AV P+ + TGS+D VW +
Sbjct: 634 RMW--DVSTGDSVR--------LFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTG 683
Query: 413 VSVVTFRGH-KRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
+ RGH K I+S+ +S V+I+ D T+++W +
Sbjct: 684 KRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDL 723
Score = 145 (56.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 30/95 (31%), Positives = 47/95 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ +W D + F GH V + FHP+ +F+GS D T R+WD+ V
Sbjct: 588 DQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNG--CYVFTGSSDKTCRMWDVSTGDSVR 645
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H + V S+A+ DG L + D ++N+WD+
Sbjct: 646 LFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDI 680
Score = 145 (56.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
+D+ +WDV G F GH V SI PD L +GS+D + VWD+ K +
Sbjct: 629 SDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDG--RWLSTGSEDGIINVWDIGTGKRL 686
Query: 68 ATLDKHFSR-VTSMAITSDGSTLISAGRDKVVNLWDLR 104
+ H + S++ + +G+ LIS G D V +WDL+
Sbjct: 687 KQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLK 724
Score = 39 (18.8 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
C + F+ +S + F D + +G D+ +++W L
Sbjct: 458 CMYTFQNTNKDMSCLDFSDDC--RIAAAGFQDSYIKIWSL 495
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 269 (99.8 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 61/221 (27%), Positives = 116/221 (52%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 371
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
A + +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 372 ----AGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 420 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 421 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 476
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 517
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 517
Score = 252 (93.8 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 355 VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 408
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 409 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 463 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 518
Query: 479 IVSCGADGLVKLWTVRT--------GE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 519 IVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 577
Query: 530 VNLW 533
+ +W
Sbjct: 578 L-IW 580
Score = 173 (66.0 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 74/284 (26%), Positives = 122/284 (42%)
Query: 134 LSSYNQQTIKKKRRS-LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 186
+S TIK +S LE I G G V D + SSD T+ EM
Sbjct: 317 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNAGEM 375
Query: 187 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 245
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 376 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 432
Query: 246 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 303
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 433 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 482
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 363
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLMAALDP 539
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
L + +V G+ + L ++ + + S D T +W
Sbjct: 540 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 580
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 369
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W+ ST
Sbjct: 428 AVNVVDFDDKYIVSASG--DRTIKVWNTST 455
Score = 132 (51.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 310
++Q + ++++D S++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 366
Query: 311 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 367 VWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 416
Query: 371 KAKAVVAAHGKDIN 384
+ V+ H +N
Sbjct: 417 TLRRVLVGHRAAVN 430
Score = 131 (51.2 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 54/213 (25%), Positives = 98/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ A + +
Sbjct: 322 DNTIKIWDKSTLECKRILTGHTGSVLCLQY----DERVIITGSSDSTVRVWDVNAGEMLN 377
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + + +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 378 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPT-DITLRRV-LVGHRAAVNVVD 433
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 434 FDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 488
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 489 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 520
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL+A
Sbjct: 484 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLMAALDP 539
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD-LRD 105
C+ TL +H RV + D ++S+ D + +WD L D
Sbjct: 540 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 585
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 269 (99.8 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 61/221 (27%), Positives = 116/221 (52%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 371
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
A + +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 372 ----AGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 420 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 421 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 476
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 517
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 517
Score = 252 (93.8 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 355 VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 408
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 409 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 463 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 518
Query: 479 IVSCGADGLVKLWTVRT--------GE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 519 IVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 577
Query: 530 VNLW 533
+ +W
Sbjct: 578 L-IW 580
Score = 173 (66.0 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 74/284 (26%), Positives = 122/284 (42%)
Query: 134 LSSYNQQTIKKKRRS-LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 186
+S TIK +S LE I G G V D + SSD T+ EM
Sbjct: 317 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNAGEM 375
Query: 187 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 245
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 376 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 432
Query: 246 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 303
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 433 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 482
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 363
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLMAALDP 539
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
L + +V G+ + L ++ + + S D T +W
Sbjct: 540 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 580
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 369
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W+ ST
Sbjct: 428 AVNVVDFDDKYIVSASG--DRTIKVWNTST 455
Score = 132 (51.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 310
++Q + ++++D S++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 366
Query: 311 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 367 VWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 416
Query: 371 KAKAVVAAHGKDIN 384
+ V+ H +N
Sbjct: 417 TLRRVLVGHRAAVN 430
Score = 131 (51.2 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 54/213 (25%), Positives = 98/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ A + +
Sbjct: 322 DNTIKIWDKSTLECKRILTGHTGSVLCLQY----DERVIITGSSDSTVRVWDVNAGEMLN 377
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + + +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 378 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPT-DITLRRV-LVGHRAAVNVVD 433
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 434 FDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 488
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 489 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 520
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL+A
Sbjct: 484 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLMAALDP 539
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD-LRD 105
C+ TL +H RV + D ++S+ D + +WD L D
Sbjct: 540 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 585
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 269 (99.8 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 61/221 (27%), Positives = 116/221 (52%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 371
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
A + +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 372 ----AGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 420 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 421 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 476
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 517
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 517
Score = 251 (93.4 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 355 VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 408
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 409 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 463 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 518
Query: 479 IVSCGADGLVKLWTV--------RTGE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 519 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 577
Query: 530 VNLW 533
+ +W
Sbjct: 578 L-IW 580
Score = 174 (66.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 73/284 (25%), Positives = 122/284 (42%)
Query: 134 LSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 186
+S TIK + +LE I G G V D + SSD T+ EM
Sbjct: 317 VSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNAGEM 375
Query: 187 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 245
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 376 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 432
Query: 246 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 303
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 433 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 482
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 363
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDP 539
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
L + +V G+ + L ++ + + S D T +W
Sbjct: 540 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 580
Score = 136 (52.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 369
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W+ ST
Sbjct: 428 AVNVVDFDDKYIVSASG--DRTIKVWNTST 455
Score = 133 (51.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 56/227 (24%), Positives = 104/227 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD + C GH G V + + D+ ++ +GS D+TVRVWD+ A + +
Sbjct: 322 DNTIKIWDKNTLECKRILTGHTGSVLCLQY----DERVIITGSSDSTVRVWDVNAGEMLN 377
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + + +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 378 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPT-DITLRRV-LVGHRAAVNVVD 433
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 434 FDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 488
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLLYTTVEVPEKKMELI 230
+ D + G VL ++ L+ C+ D + ++ + K +L+
Sbjct: 489 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 534
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 34/134 (25%), Positives = 65/134 (48%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 310
++Q + ++++D +++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 366
Query: 311 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 367 VWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 416
Query: 371 KAKAVVAAHGKDIN 384
+ V+ H +N
Sbjct: 417 TLRRVLVGHRAAVN 430
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL+A
Sbjct: 484 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDP 539
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD-LRD 105
C+ TL +H RV + D ++S+ D + +WD L D
Sbjct: 540 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 585
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 253 (94.1 bits), Expect = 6.6e-20, Sum P(2) = 6.6e-20
Identities = 77/257 (29%), Positives = 123/257 (47%)
Query: 265 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG- 323
++ D + S +L GHS V + S + +++ S+D +VRLW ++ C+ VG
Sbjct: 286 RIMDEKTASELKILYGHSGPVY---GASFSPDRNYLLSSSEDGTVRLWSLQTFTCL-VGY 341
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
GH V FS + VSG D ++W+ D QP+ + A H D+
Sbjct: 342 KGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHY-----QPLR-----IFAGHLADV 390
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
N PN + V TGS DRT +W + + V F GHK I S+ FSP + + T + D
Sbjct: 391 NCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATD 450
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW-TVRTGECIAT 501
+ +W I G + +GHT +V F +R +I++ G+ D V+LW V+ E + T
Sbjct: 451 GRVLLWDIGHGLMVGELKGHTDTVCSLRF-SRDGEILASGSMDNTVRLWDAVKAFEDLET 509
Query: 502 YDKHEDKIWALAVGKKT 518
D ++ + + K T
Sbjct: 510 -DNSQELLLGTYMTKST 525
Score = 249 (92.7 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 61/235 (25%), Positives = 100/235 (42%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
LI S D R+ D ++ + + GH G V +FS +N+L+S S D T+++WS
Sbjct: 275 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQ 333
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+ H + +P +G DR A +W + F
Sbjct: 334 TFT----------CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 383
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH + F P V T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 384 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 443
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ + DG V LW + G + H D + +L + E+ A+G D V LW
Sbjct: 444 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 498
Score = 206 (77.6 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 73/317 (23%), Positives = 139/317 (43%)
Query: 173 YEQKSSDVTISFEMDDSKRGFTAATV-----LPSNQGLLCVTADQQLLLYTTVEVPEKKM 227
Y+Q + V ++ + GF +TV P + AD L+ + +V E+ M
Sbjct: 229 YQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIM 288
Query: 228 -ELILS--KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEI 284
E S K L G++ + F + YL ++ V+++ L + +C GH+
Sbjct: 289 DEKTASELKILYGHSGPVYGASF-SPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYP 347
Query: 285 VLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLV 344
V DT S V+G D RLW ++ + + GH+ V F N++
Sbjct: 348 VW--DT-QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN-SNYVA 403
Query: 345 SGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTA 404
+GS+D T+++W +N + H I+SL +PN + TG+ D
Sbjct: 404 TGSADRTVRLWDV----------LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRV 453
Query: 405 CVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW-SISDGSCLKTFEGH 463
+W + + V +GH + S+ FS +++ + S D T+++W ++ L+T +
Sbjct: 454 LLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLET--DN 511
Query: 464 TSSVLRASFLTRGAQIV 480
+ +L +++T+ +V
Sbjct: 512 SQELLLGTYMTKSTPVV 528
Score = 169 (64.5 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 37/95 (38%), Positives = 47/95 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
ADR V +WDV G C F GHKG + S+ F P+ L +G+ D V +WD+ V
Sbjct: 407 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWDIGHGLMV 464
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H V S+ + DG L S D V LWD
Sbjct: 465 GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 149 (57.5 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 38/153 (24%), Positives = 65/153 (42%)
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 440
K + S+ A + SL+ S D + + GH ++ FSP ++++
Sbjct: 262 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 321
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 500
S D T+++WS+ +CL ++GH V F G VS G D + +LW + +
Sbjct: 322 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 381
Query: 501 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ H + + ATG +D V LW
Sbjct: 382 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLW 414
Score = 148 (57.2 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 43/156 (27%), Positives = 68/156 (43%)
Query: 378 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 437
A+ + + ++ V + SL+ G D T VW V+ R K+ + + S +D+
Sbjct: 228 AYQQGLTAVDVTDDSSLIAGGFADSTVRVWS----VTPKKLRSVKQ---AADLSLIDK-- 278
Query: 438 ITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE 497
S D +I S LK GH+ V ASF ++S DG V+LW+++T
Sbjct: 279 --ESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 336
Query: 498 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
C+ Y H +W F +GG D + LW
Sbjct: 337 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 372
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G DR +W D F GH V+ FHP+++ + +GS D TVR+WD+L C
Sbjct: 364 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNC 421
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
V H + S+ + +G L + D V LWD+
Sbjct: 422 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 458
Score = 61 (26.5 bits), Expect = 6.6e-20, Sum P(2) = 6.6e-20
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKK 65
D SL+ G D+TVRVW + KK
Sbjct: 241 DSSLIAGGFADSTVRVWSVTPKK 263
Score = 57 (25.1 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 41 DTDKSLLFSGSDDATVRVW---DLLAKKCVAT-LDKHFSRVTSMAITSDGSTLISAG-RD 95
D+DK + T RV D L C T L+ + +T++ +T D S+LI+ G D
Sbjct: 193 DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQQGLTAVDVTDD-SSLIAGGFAD 251
Query: 96 KVVNLWDL 103
V +W +
Sbjct: 252 STVRVWSV 259
Score = 40 (19.1 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 274 CSYV-LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
C Y L + + + +D SS LI G D++VR+W
Sbjct: 221 CFYTFLNAYQQGLTAVDVTDDSS---LIAGGFADSTVRVW 257
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 258 (95.9 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 69/270 (25%), Positives = 123/270 (45%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
+ V+ + S +Y GH + V C++ SG +L +GS+D +VR+W + V
Sbjct: 5 LMVWHMKPQSRAYRFTGHKDAVTCVNFSP--SGHLL-ASGSRDKTVRIWVPNVKGESTVF 61
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
H V +V F Q+F V+ S D T+KVW+ K ++ H +
Sbjct: 62 RAHTATVRSVHFCSDGQSF-VTASDDKTVKVWATH----------RQKFLFSLSQHINWV 110
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
+P+ L+ + S D+T +W V ++ H + V+F P + A D
Sbjct: 111 RCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMD 170
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
T+K+W + L+ ++ H+++V SF G +++ +D +K+ + G + T
Sbjct: 171 NTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLH 230
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLW 533
H+ +A + E FA+GGSD V +W
Sbjct: 231 GHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 232 (86.7 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 62/228 (27%), Positives = 100/228 (43%)
Query: 306 DNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAE 365
D+ + +W + + TGH AV V FS + L SGS D T+++W
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS-GHLLASGSRDKTVRIWV--------- 51
Query: 366 QPMNLKAKAVV-AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRG 424
P N+K ++ V AH + S+ + T S D+T VW + + H
Sbjct: 52 -P-NVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINW 109
Query: 425 IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA 484
+ +FSP +++++AS DKT+K+W S C+ ++ H V F G I + G
Sbjct: 110 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 169
Query: 485 DGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 532
D VK+W VRT + Y H + L+ T SD+ + +
Sbjct: 170 DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 217
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 34/137 (24%), Positives = 56/137 (40%)
Query: 401 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 460
D VW + F GHK + V FSP ++ + S DKT++IW + F
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 461 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 520
HT++V F + G V+ D VK+W + + + +H + + +
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRL 121
Query: 521 FATGGSDALVNLWHDST 537
+ D V LW S+
Sbjct: 122 IVSASDDKTVKLWDKSS 138
Score = 136 (52.9 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 36/108 (33%), Positives = 55/108 (50%)
Query: 4 LLEGA-DRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
L G+ D+ V +W +V G + F+ H V S+ F D +S + + SDD TV+VW
Sbjct: 38 LASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSD-GQSFV-TASDDKTVKVWA 93
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+K + +L +H + V + DG ++SA DK V LWD C
Sbjct: 94 THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSREC 141
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWDV +++ H V+ + FHP + L + S D+T+++ DL+ +
Sbjct: 168 GMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGN--YLITASSDSTLKILDLMEGRL 225
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW----DLRDYSCKLTVP 113
+ TL H T++A + G S G D+ V +W D+ D+ VP
Sbjct: 226 LYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVTKVP 276
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 32/93 (34%), Positives = 45/93 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D ++VW + + F GHK V+ + F P LL SGS D TVR+W K
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH--LLASGSRDKTVRIWVPNVKGEST 59
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
H + V S+ SDG + ++A DK V +W
Sbjct: 60 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 92
Score = 130 (50.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VW H V F PD L+ S SDD TV++WD +++CV
Sbjct: 86 DKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG--RLIVSASDDKTVKLWDKSSRECVH 143
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
+ +H VT + G+ + +AG D V +WD+R +
Sbjct: 144 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 181
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 246 (91.7 bits), Expect = 7.6e-20, P = 7.6e-20
Identities = 73/263 (27%), Positives = 123/263 (46%)
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV 330
+ + L GH V+ +D +S + + S D +RLWD E+ + + G + A
Sbjct: 54 LDLQWSLEGHQLGVVSVD---ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDA- 109
Query: 331 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 390
+AFS Q +L +G+ H KV F S E ++ + GK I S+A +P
Sbjct: 110 WTLAFSPDSQ-YLATGT--HVGKVNIFGVESGKKEYSLDTR--------GKFILSIAYSP 158
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+ + +G+ D ++ + + T GH I S+ FSP Q+++TAS D IKI+
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
+ + T GH S VL +F VS +D VK+W V T C+ T+ H+D++W
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Query: 511 ALAVGKKTEMFATGGSDALVNLW 533
+ + G D ++++
Sbjct: 279 GVKYNGNGSKIVSVGDDQEIHIY 301
Score = 161 (61.7 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 58/240 (24%), Positives = 98/240 (40%)
Query: 300 IVTGSKDNSVRLWD--SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 357
+VTGS D+ V++W E GH V +V S L S S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLW-- 91
Query: 358 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 417
D E +K+ + A D +LA +P+ + TG+ ++ + +
Sbjct: 92 -----DLENGKQIKS---IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 143
Query: 418 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 477
+ I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 478 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+V+ DG +K++ V+ T H + +A F + SD V +W T
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 49/200 (24%), Positives = 93/200 (46%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 309
+ QYLA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 310 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 369
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 223
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
L ++ H + ++A P+D+ + S D++ VW + V TF H+ +W V+
Sbjct: 224 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVK 281
Query: 430 FSPVDQVVITASGDKTIKIW 449
++ +++ D+ I I+
Sbjct: 282 YNGNGSKIVSVGDDQEIHIY 301
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D + ++D+ G H +GH + S+ F PD+ LL + SDD ++++D+
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQ 220
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
TL H S V ++A D + +S+ DK V +WD+ +C
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 47/212 (22%), Positives = 94/212 (44%)
Query: 326 HMGAVGAVAF-SKKLQNF--LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 382
H A+ +VA+ S K +N +V+GS D +KVW + D + + VV+ D
Sbjct: 15 HDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSV---D 71
Query: 383 IN-SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 441
I+ +L +A + SL D +W L + + + W++ FSP Q + T +
Sbjct: 72 ISHTLPIAASSSL------DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGT 125
Query: 442 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
+ I+ + G + + +L ++ G + S DG++ ++ + TG+ + T
Sbjct: 126 HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 502 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ H I +L +++ T D + ++
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Score = 126 (49.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++DV GH V ++ F PD D + S S D +V+VWD+ + CV
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD-DTHFV-SSSSDKSVKVWDVGTRTCVH 268
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
T H +V + +GS ++S G D+ ++++D
Sbjct: 269 TFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 111 (44.1 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ I L F + Q L A++ +++YD+ + + L+GH+ VL + C
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
+ V+ S D SV++WD +R CV H V V ++ +VS D I +
Sbjct: 245 TH---FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHI 300
Query: 355 W 355
+
Sbjct: 301 Y 301
Score = 80 (33.2 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD++ G ++ F PD+ L +G+ V ++ + + K
Sbjct: 85 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQ--YLATGTHVGKVNIFGVESGKKEY 142
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+LD + S+A + DG L S D ++N++D+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 246 (91.7 bits), Expect = 7.6e-20, P = 7.6e-20
Identities = 73/263 (27%), Positives = 123/263 (46%)
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV 330
+ + L GH V+ +D +S + + S D +RLWD E+ + + G + A
Sbjct: 54 LDLQWSLEGHQLGVVSVD---ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDA- 109
Query: 331 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 390
+AFS Q +L +G+ H KV F S E ++ + GK I S+A +P
Sbjct: 110 WTLAFSPDSQ-YLATGT--HVGKVNIFGVESGKKEYSLDTR--------GKFILSIAYSP 158
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+ + +G+ D ++ + + T GH I S+ FSP Q+++TAS D IKI+
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
+ + T GH S VL +F VS +D VK+W V T C+ T+ H+D++W
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Query: 511 ALAVGKKTEMFATGGSDALVNLW 533
+ + G D ++++
Sbjct: 279 GVKYNGNGSKIVSVGDDQEIHIY 301
Score = 163 (62.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 58/240 (24%), Positives = 100/240 (41%)
Query: 300 IVTGSKDNSVRLWD-SESRCCVGVGT-GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 357
+VTGS D+ V++W + R + GH V +V S L S S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLW-- 91
Query: 358 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 417
D E +K+ + A D +LA +P+ + TG+ ++ + +
Sbjct: 92 -----DLENGKQIKS---IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 143
Query: 418 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 477
+ I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 478 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+V+ DG +K++ V+ T H + +A F + SD V +W T
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 49/200 (24%), Positives = 93/200 (46%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 309
+ QYLA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 310 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 369
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 223
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
L ++ H + ++A P+D+ + S D++ VW + V TF H+ +W V+
Sbjct: 224 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVK 281
Query: 430 FSPVDQVVITASGDKTIKIW 449
++ +++ D+ I I+
Sbjct: 282 YNGNGSKIVSVGDDQEIHIY 301
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D + ++D+ G H +GH + S+ F PD+ LL + SDD ++++D+
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQ 220
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
TL H S V ++A D + +S+ DK V +WD+ +C
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Score = 143 (55.4 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 46/212 (21%), Positives = 94/212 (44%)
Query: 326 HMGAVGAVAF-SKKLQNF--LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 382
H A+ +VA+ + K +N +V+GS D +KVW + D + + VV+ D
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSV---D 71
Query: 383 IN-SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 441
I+ +L +A + SL D +W L + + + W++ FSP Q + T +
Sbjct: 72 ISHTLPIAASSSL------DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGT 125
Query: 442 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
+ I+ + G + + +L ++ G + S DG++ ++ + TG+ + T
Sbjct: 126 HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 502 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ H I +L +++ T D + ++
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Score = 126 (49.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++DV GH V ++ F PD D + S S D +V+VWD+ + CV
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD-DTHFV-SSSSDKSVKVWDVGTRTCVH 268
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
T H +V + +GS ++S G D+ ++++D
Sbjct: 269 TFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 111 (44.1 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ I L F + Q L A++ +++YD+ + + L+GH+ VL + C
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
+ V+ S D SV++WD +R CV H V V ++ +VS D I +
Sbjct: 245 TH---FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHI 300
Query: 355 W 355
+
Sbjct: 301 Y 301
Score = 80 (33.2 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD++ G ++ F PD+ L +G+ V ++ + + K
Sbjct: 85 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQ--YLATGTHVGKVNIFGVESGKKEY 142
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+LD + S+A + DG L S D ++N++D+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 261 (96.9 bits), Expect = 9.5e-20, P = 9.5e-20
Identities = 69/254 (27%), Positives = 117/254 (46%)
Query: 280 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL 339
GH + V C+D +L++ + +GS D+++ +W + + TGH AV V FS
Sbjct: 17 GHRDAVTCVDF-SLNTKHL--ASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS- 72
Query: 340 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVV-AAHGKDINSLAVAPNDSLVCTG 398
+ L SGS D T+++W P N+K ++ V AH + S+ + + T
Sbjct: 73 GHLLASGSRDKTVRIWV----------P-NVKGESTVFRAHTATVRSVHFCSDGQSLVTA 121
Query: 399 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
S D+T VW + + H + +FSP +++++AS DKT+K+W + C+
Sbjct: 122 SDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIH 181
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 518
++ H V F G I + G D VK+W RT + Y H + AL+
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSG 241
Query: 519 EMFATGGSDALVNL 532
T SD+ + +
Sbjct: 242 NYLITASSDSTLKI 255
Score = 235 (87.8 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 66/214 (30%), Positives = 98/214 (45%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH AV V FS ++ L SGS D T+ +W +P + + H +
Sbjct: 17 GHRDAVTCVDFSLNTKH-LASGSMDSTLMIWHM--------KPQSRAYR--FTGHKDAVT 65
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT-FRGHKRGIWSVEFSPVDQVVITASGD 443
+ +P+ L+ +GS+D+T +W +P++ T FR H + SV F Q ++TAS D
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDD 124
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KT+K+WS L + H + V A F G IVS D VKLW + ECI +Y
Sbjct: 125 KTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYC 184
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+H + + A G D V +W T
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDART 218
Score = 197 (74.4 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 64/258 (24%), Positives = 106/258 (41%)
Query: 234 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
R G+ + + + F LA + + V+++ + S V H+ V + C
Sbjct: 56 RFTGHKDAVTCVNF-SPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFC-- 112
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
S G+ L VT S D +V++W + + + T H+ V FS +VS S D T+K
Sbjct: 113 SDGQSL-VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPD-GRLIVSASDDKTVK 170
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W D S + HG + + P+ + + D T VW
Sbjct: 171 LW--DKTSRECIHSY--------CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHR 220
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
+ ++ H + ++ F P +ITAS D T+KI + +G L T GH +F
Sbjct: 221 LLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS 280
Query: 474 TRGAQIVSCGADGLVKLW 491
G S G+D V +W
Sbjct: 281 RTGEYFASGGSDEQVMVW 298
Score = 138 (53.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 34/99 (34%), Positives = 49/99 (49%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D +++W + + F GHK V+ + F P LL SGS D TVR+W
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH--LLASGSRDKTVRIWVPN 91
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
K H + V S+ SDG +L++A DK V +W
Sbjct: 92 VKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Score = 138 (53.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 36/108 (33%), Positives = 56/108 (51%)
Query: 4 LLEGA-DRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
L G+ D+ V +W +V G + F+ H V S+ F D +SL+ + SDD TV+VW
Sbjct: 76 LASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSD-GQSLV-TASDDKTVKVWS 131
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
++ + +L +H + V + DG ++SA DK V LWD C
Sbjct: 132 THRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 31/104 (29%), Positives = 52/104 (50%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWD +++ H V+++ FHP + L + S D+T+++ DL+ +
Sbjct: 206 GMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGN--YLITASSDSTLKILDLMEGRL 263
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW----DLRDY 106
+ TL H T++A + G S G D+ V +W D+ DY
Sbjct: 264 LYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDY 307
Score = 129 (50.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 30/98 (30%), Positives = 46/98 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VW H V F PD L+ S SDD TV++WD +++C+
Sbjct: 124 DKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG--RLIVSASDDKTVKLWDKTSRECIH 181
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
+ +H VT + G+ + +AG D V +WD R +
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTH 219
Score = 110 (43.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 25 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 84
+FKGH+ V+ + F +T L SGS D+T+ +W + + H VT + +
Sbjct: 14 HFKGHRDAVTCVDFSLNTKH--LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 85 DGSTLISAGRDKVVNLW 101
G L S RDK V +W
Sbjct: 72 SGHLLASGSRDKTVRIW 88
Score = 56 (24.8 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
YL A++ +++ DL Y L GH T A S +G D V +W
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPAT---TVAFSRTGEYFASGGSDEQVMVWK 299
Query: 314 S 314
S
Sbjct: 300 S 300
Score = 39 (18.8 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 69 TLDKHFS----RVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
+L++HF VT + + + L S D + +W ++ S
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS 52
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 245 (91.3 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 74/263 (28%), Positives = 123/263 (46%)
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV 330
+ + L GH V+ +D +S + + S D +RLWD E+ + + G + A
Sbjct: 54 LELQWSLEGHQLGVVSVD---ISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDA- 109
Query: 331 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 390
+AFS Q +L +G+ H KV F S E ++ + GK I S+A +P
Sbjct: 110 WTLAFSPDSQ-YLATGT--HMGKVNIFGVESGKKEYSLDTR--------GKFILSIAYSP 158
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+ + +G+ D ++ + + T GH I S+ FSP Q+++TAS D IKI+
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
+ + T GH S VL +F VS +D VK+W V T CI T+ H+D++W
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVW 278
Query: 511 ALAVGKKTEMFATGGSDALVNLW 533
+ + G D ++++
Sbjct: 279 GVKYNGNGSKIVSVGDDQEIHVY 301
Score = 162 (62.1 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 58/240 (24%), Positives = 100/240 (41%)
Query: 300 IVTGSKDNSVRLWD-SESRCCVGVGT-GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 357
+VTGS D+ V++W + R + GH V +V S L S S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLW-- 91
Query: 358 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 417
D E +K+ + A D +LA +P+ + TG+ ++ + +
Sbjct: 92 -----DLENGKQMKS---IDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYS 143
Query: 418 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 477
+ I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 478 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+V+ DG +K++ V+ T H + +A F + SD V +W T
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 153 (58.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 47/200 (23%), Positives = 93/200 (46%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 309
+ QYLA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 310 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 369
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 223
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
L ++ H + ++A P+D+ + S D++ VW + + TF H+ +W V+
Sbjct: 224 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVK 281
Query: 430 FSPVDQVVITASGDKTIKIW 449
++ +++ D+ I ++
Sbjct: 282 YNGNGSKIVSVGDDQEIHVY 301
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D + ++D+ G H +GH + S+ F PD+ LL + SDD ++++D+
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQ 220
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
TL H S V ++A D + +S+ DK V +WD+ +C
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Score = 126 (49.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 37/150 (24%), Positives = 71/150 (47%)
Query: 391 NDSLVCTGSQDRTACVWRLPD--LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKI 448
N V TGS D VW+ D L + GH+ G+ SV+ S + ++S D I++
Sbjct: 31 NIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 90
Query: 449 WSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKHED 507
W + +G +K+ + +F + +Q ++ G G V ++ V +G+ + D
Sbjct: 91 WDLENGKQMKSIDAGPVDAWTLAF-SPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGK 149
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
I ++A + A+G D ++N++ +T
Sbjct: 150 FILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++DV GH V ++ F PD D + S S D +V+VWD+ + C+
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD-DTHFV-SSSSDKSVKVWDVGTRTCIH 268
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
T H +V + +GS ++S G D+ ++++D
Sbjct: 269 TFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 111 (44.1 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ I L F + Q L A++ +++YD+ + + L+GH+ VL + C
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
+ V+ S D SV++WD +R C+ H V V ++ +VS D I V
Sbjct: 245 TH---FVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHV 300
Query: 355 W 355
+
Sbjct: 301 Y 301
Score = 80 (33.2 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD++ G ++ F PD+ L +G+ V ++ + + K
Sbjct: 85 DAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQ--YLATGTHMGKVNIFGVESGKKEY 142
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+LD + S+A + DG L S D ++N++D+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 265 (98.3 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 272
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+ +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 273 ----TGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 321
Query: 420 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 322 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 377
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 517
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 378 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 418
Score = 251 (93.4 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 256 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 309
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 310 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 363
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 364 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 419
Query: 479 IVSCGADGLVKLWTV--------RTGE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 420 IVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 478
Query: 530 VNLW 533
+ +W
Sbjct: 479 L-IW 481
Score = 173 (66.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 74/284 (26%), Positives = 122/284 (42%)
Query: 134 LSSYNQQTIKKKRRS-LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 186
+S TIK +S LE I G G V D + SSD T+ EM
Sbjct: 218 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNTGEM 276
Query: 187 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 245
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 277 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 333
Query: 246 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 303
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 334 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 383
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 363
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 384 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLIAALDP 440
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
L + +V G+ + L ++ + + S D T +W
Sbjct: 441 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 481
Score = 138 (53.6 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 270
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 271 VNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W+ ST
Sbjct: 329 AVNVVDFDDKYIVSASG--DRTIKVWNTST 356
Score = 132 (51.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 310
++Q + ++++D S++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 267
Query: 311 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 268 VWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 317
Query: 371 KAKAVVAAHGKDIN 384
+ V+ H +N
Sbjct: 318 TLRRVLVGHRAAVN 331
Score = 130 (50.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 33/116 (28%), Positives = 56/116 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL+A
Sbjct: 385 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLIAALDP 440
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD-LRDYSCKLTVP 113
C+ TL +H RV + D ++S+ D + +WD L D + + P
Sbjct: 441 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP 494
Score = 129 (50.5 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 56/227 (24%), Positives = 102/227 (44%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 223 DNTIKIWDKSTLECKRILTGHTGSVLCLQY----DERVIITGSSDSTVRVWDVNTGEMLN 278
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + + +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 279 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPT-DITLRRV-LVGHRAAVNVVD 334
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 335 FDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 389
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLLYTTVEVPEKKMELI 230
+ D + G VL ++ L+ C+ D + ++ + K +LI
Sbjct: 390 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLI 435
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 265 (98.3 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 69/233 (29%), Positives = 120/233 (51%)
Query: 281 HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQ 340
+S+ V CL GKI V+G +DN++++WD CV GH G+V + + K+
Sbjct: 209 NSKGVYCLQ---YDDGKI--VSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKV- 262
Query: 341 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 400
++SGSSD T++VW + + +N + H + + L N+ ++ T S+
Sbjct: 263 --IISGSSDSTVRVWDVN-----TGEMVN-----TLIHHCEAVLHLRF--NNGMMVTCSK 308
Query: 401 DRTACVWRLPDLVSVVTFR----GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
DR+ VW + S +T R GH+ + V+F ++ +++ASGD+TIK+WS S
Sbjct: 309 DRSIAVWDMTS-PSEITLRRVLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWSTSTCEF 365
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI 509
++T GH + A R +VS +D ++LW + G C+ + HE+ +
Sbjct: 366 VRTLNGHKRGI--ACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELV 416
Score = 246 (91.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 71/252 (28%), Positives = 122/252 (48%)
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
C K+ I++GS D++VR+WD + V H AV + F+ + +V+ S D
Sbjct: 255 CLQYDDKV-IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGM---MVTCSKDR 310
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
+I VW D P + + V+ H +N V ++ + + S DRT VW
Sbjct: 311 SIAVW-------DMTSPSEITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKVWSTS 361
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
V T GHKRGI +++ D++V++ S D +I++W I G+CL+ EGH V
Sbjct: 362 TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCI 419
Query: 471 SFLTRGAQIVSCGADGLVKLWTV------RTGE---CIATYDKHEDKIWALAVGKKTEMF 521
F T+ +IVS DG +K+W + R C+ T +H +++ L + ++
Sbjct: 420 RFDTK--RIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQFDE-FQIV 476
Query: 522 ATGGSDALVNLW 533
++ D ++ +W
Sbjct: 477 SSSHDDTIL-IW 487
Score = 175 (66.7 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 75/284 (26%), Positives = 120/284 (42%)
Query: 134 LSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 186
+S TIK R L+ +G G V D + SSD T+ EM
Sbjct: 224 VSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISG-SSDSTVRVWDVNTGEM 282
Query: 187 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 245
++ A + L N G++ + + + + P E+ L + LVG+ + +
Sbjct: 283 VNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMTSPS---EITLRRVLVGHRAAVNVV 339
Query: 246 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 303
F +E+Y+ A+ ++V+ S+ +C +V L GH + CL L+V+G
Sbjct: 340 DF---DEKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVVSG 389
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 363
S DNS+RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 390 SSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKR---IVSGAYDGKIKVWDLVAALDP 446
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
L +V G+ + L ++ + + S D T +W
Sbjct: 447 RAASNTLCLNTLVEHTGR-VFRLQF--DEFQIVSSSHDDTILIW 487
Score = 148 (57.2 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 36/117 (30%), Positives = 59/117 (50%)
Query: 421 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 480
+ +G++ +++ D +++ D TIKIW +D C+KT GHT SVL + + I+
Sbjct: 209 NSKGVYCLQYD--DGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDK--VII 264
Query: 481 SCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
S +D V++W V TGE + T H + + L M T D + +W D T
Sbjct: 265 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVW-DMT 318
Score = 130 (50.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 31/109 (28%), Positives = 56/109 (51%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F DT + + SG+ D ++VWDL+A
Sbjct: 391 SDNSIRLWDIECGACLRVLEGHEELVRCIRF--DTKR--IVSGAYDGKIKVWDLVAALDP 446
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
C+ TL +H RV + D ++S+ D + +WD +++
Sbjct: 447 RAASNTLCLNTLVEHTGRVFRLQF--DEFQIVSSSHDDTILIWDFLNFT 493
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 56/227 (24%), Positives = 102/227 (44%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D ++ SGS D+TVRVWD+ + V
Sbjct: 229 DNTIKIWDRTDLQCVKTLMGHTGSVLCLQY----DDKVIISGSSDSTVRVWDVNTGEMVN 284
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + + +++ +D+ + +WD+ S ++T+ +V A+
Sbjct: 285 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMTSPS-EITLRRV-LVGHRAAVNVVD 340
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
+ ++ S+ +TIK S F+ T+ +RGI + D L SSD +I
Sbjct: 341 FDEKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNSI-- 395
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLLYTTVEVPEKKMELI 230
+ D + G VL ++ L+ C+ D + ++ + K +L+
Sbjct: 396 RLWDIECG-ACLRVLEGHEELVRCIRFDTKRIVSGAYDGKIKVWDLV 441
Score = 121 (47.7 bits), Expect = 0.00066, P = 0.00066
Identities = 67/288 (23%), Positives = 126/288 (43%)
Query: 197 TVLPSNQGLLCVTADQQLLLY----TTVEVPEKKM-ELILSKRLVGYNEEILDLKFLGEE 251
T++ +LC+ D ++++ +TV V + E++ L+ + E +L L+F
Sbjct: 245 TLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMV--NTLIHHCEAVLHLRF---N 299
Query: 252 EQYLAVATNIEQVQVYDLSSMS---CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
+ + + V+D++S S VL GH V +D + IV+ S D +
Sbjct: 300 NGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDF-----DEKYIVSASGDRT 354
Query: 309 VRLWDSESRC-CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 367
+++W S S C V GH + + + +L +VSGSSD++I++W D E
Sbjct: 355 IKVW-STSTCEFVRTLNGHKRGIACLQYRDRL---VVSGSSDNSIRLW-------DIECG 403
Query: 368 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL-----PDLVS----VVTF 418
L+ V+ H + + + + + +G+ D VW L P S + T
Sbjct: 404 ACLR---VLEGHEELVRCIRF--DTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTL 458
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 466
H ++ ++F ++++S D TI IW + + + G T S
Sbjct: 459 VEHTGRVFRLQFDEFQ--IVSSSHDDTILIWDFLNFTPNENKTGRTPS 504
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 269 (99.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 63/210 (30%), Positives = 95/210 (45%)
Query: 326 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA--AHGKDI 383
H AV + +K LV+G DH + +W+ K A+++ H I
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIG------------KPNAILSLYGHSSGI 62
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
+S+ ++ LV G+ T +W L + V T GH+ SV F P + + S D
Sbjct: 63 DSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLD 122
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
+KIW I C+ T++GHT V F G IVS G D +VK+W + G+ + +
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFK 182
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLW 533
HE KI +L + ATG +D V W
Sbjct: 183 SHEGKIQSLDFHPHEFLLATGSADKTVKFW 212
Score = 217 (81.4 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 57/221 (25%), Positives = 97/221 (43%)
Query: 281 HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQ 340
HS V CL SS ++L VTG +D+ V LW + GH + +V F +
Sbjct: 15 HSAAVNCLKIGRKSS-RVL-VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-E 71
Query: 341 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 400
+ +G++ TIK+W D E+ K + H + S+ P +GS
Sbjct: 72 GLVAAGAASGTIKLW-------DLEEA---KVVRTLTGHRSNCVSVNFHPFGEFFASGSL 121
Query: 401 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 460
D +W + + T++GH RG+ + F+P + +++ D +K+W ++ G L F
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEF 181
Query: 461 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
+ H + F + + AD VK W + T E I +
Sbjct: 182 KSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGS 222
Score = 198 (74.8 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 60/269 (22%), Positives = 113/269 (42%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ V ++ + LK + + L +V ++ + + L GHS + D+
Sbjct: 10 QEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGI---DSVT 66
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ + L+ G+ +++LWD E V TGH +V F F SGS D +
Sbjct: 67 FDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHP-FGEFFASGSLDTNL 125
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVV---AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
K+W +++ K + H + +N L P+ + +G +D VW L
Sbjct: 126 KIW-------------DIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL 172
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
+ F+ H+ I S++F P + ++ T S DKT+K W + + + T+ V
Sbjct: 173 TAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRC 232
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGEC 498
+F G ++ CG +K+++ C
Sbjct: 233 LTFNPDGKSVL-CGLQESLKIFSWEPIRC 260
Score = 155 (59.6 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 31/96 (32%), Positives = 47/96 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
A + +WD++ GH+ S+ FHP + SGS D +++WD+ K C+
Sbjct: 79 ASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGE--FFASGSLDTNLKIWDIRKKGCI 136
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
T H V + T DG ++S G D VV +WDL
Sbjct: 137 HTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL 172
Score = 147 (56.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 31/98 (31%), Positives = 46/98 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD+ C H +KGH V+ + F PD + SG +D V+VWDL A K +
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG--RWIVSGGEDNVVKVWDLTAGKLLH 179
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
H ++ S+ L + DK V WDL +
Sbjct: 180 EFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETF 217
Score = 137 (53.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWD+ G H FK H+G + S+ FHP + LL +GS D TV+ WDL +
Sbjct: 162 GEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPH--EFLLATGSADKTVKFWDLETFEL 219
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+ + + V + DG +++ G + + ++ C
Sbjct: 220 IGSGGTETTGVRCLTFNPDGKSVL-CGLQESLKIFSWEPIRC 260
Score = 131 (51.2 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 32/110 (29%), Positives = 49/110 (44%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D KV +W + GH + S+ F D + L+ +G+ T+++WDL K
Sbjct: 36 GEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF--DASEGLVAAGAASGTIKLWDLEEAKV 93
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
V TL H S S+ G S D + +WD+R C + TY+
Sbjct: 94 VRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGC---IHTYK 140
Score = 44 (20.5 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 154 ITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAAT 197
++ GE +V++W+ + L+E KS + I +D F AT
Sbjct: 159 VSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQ-SLDFHPHEFLLAT 202
Score = 38 (18.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 26/103 (25%), Positives = 40/103 (38%)
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS + L D+ S+ +G G + +K L VS +SD K G S
Sbjct: 319 SGSGRDQAGLNDNSSKVILGKLPGSQKVDPLLKETKSLGKLSVSQNSDPLPKDTKSTGRS 378
Query: 362 D--DAEQPMNLKAKAV---VAAHGKDINSLAVAPNDSLVCTGS 399
+ P+ + K + A H D V + +L TGS
Sbjct: 379 SVSQSSDPLVKEPKPLGRFSATHSSD----TVKESRTLSSTGS 417
>TAIR|locus:2170061 [details] [associations]
symbol:AT5G50120 "AT5G50120" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0009733 "response to auxin stimulus" evidence=RCA]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB026650
HOGENOM:HOG000236376 IPI:IPI00531222 RefSeq:NP_199823.1
UniGene:At.9028 ProteinModelPortal:Q9FG99 SMR:Q9FG99 STRING:Q9FG99
EnsemblPlants:AT5G50120.1 GeneID:835077 KEGG:ath:AT5G50120
TAIR:At5g50120 InParanoid:Q9FG99 OMA:RTLKIWR PhylomeDB:Q9FG99
ProtClustDB:CLSN2916602 Genevestigator:Q9FG99 Uniprot:Q9FG99
Length = 388
Score = 232 (86.7 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 68/217 (31%), Positives = 108/217 (49%)
Query: 292 ALSSGKILIVTGSKDNSVRLW-DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
ALS L+ + S D ++++W ++ +C H A+ AVA S+ + +GSSD
Sbjct: 172 ALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSEN--GDIYTGSSDQ 229
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVA-PNDSLVCTGSQDRTACVWRL 409
IKVW + ++ ++ A+++ H IN+LA++ N SL+ +G D + VW
Sbjct: 230 RIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWER 289
Query: 410 PD---LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS--DGSCLKTFEGHT 464
D +V V RGH + + + V ++ + S DKT+++W S D SCL EGH
Sbjct: 290 DDGGDIVVVGMLRGHTESVLCL--AVVSDILCSGSADKTVRLWKCSAKDYSCLAMLEGHL 347
Query: 465 SSV--LRASFL-TRGAQ-----IVSCGADGLVKLWTV 493
V L +F +R A I S G D VK+W V
Sbjct: 348 GPVKCLTGAFRDSRKADEASYHIYSGGLDSQVKVWQV 384
Score = 171 (65.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 74/266 (27%), Positives = 110/266 (41%)
Query: 295 SGKILIVTGSKDNSVRLWDS-------ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS 347
+GK L TGS D VRLW++ E+ V TG G GAV L + L +
Sbjct: 47 AGKRLY-TGSNDGVVRLWNANTLETLAEASSNGDVITGERGGGGAVKSLVILADKLFTAH 105
Query: 348 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTA-CV 406
DH I+VW ++D E+ + GK LA P S DR A C+
Sbjct: 106 QDHKIRVWK---INDVVEEDVG----------GKKYMHLATMPTIS-------DRFAKCL 145
Query: 407 WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG--------DKTIKIWSISDGSCLK 458
+P + V R HK+ W V + ++ G D+T+KIW +D CL+
Sbjct: 146 --MPK--NQVEIRRHKKASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLE 201
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE----------CIATYDKHEDK 508
+F + A L+ I + +D +K+W E +A +H
Sbjct: 202 SFTNAHDDAINAVALSENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSG 261
Query: 509 IWALAV-GKKTEMFATGGSDALVNLW 533
I ALA+ G + +GGSD + +W
Sbjct: 262 INALALSGTNGSLLHSGGSDGSILVW 287
Score = 126 (49.4 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 46/176 (26%), Positives = 79/176 (44%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF-RGHKRGIWSVEFS 431
KA H ++ LA++ + +L+ + S DRT +WR D + +F H I +V S
Sbjct: 158 KASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALS 217
Query: 432 PVDQVVITASGDKTIKIW--SISDGSCLKT--------FEGHTSSVLRASFL-TRGAQIV 480
+ T S D+ IK+W +I++ + K H S + + T G+ +
Sbjct: 218 ENGDIY-TGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLH 276
Query: 481 SCGADGLVKLWTVRTGECIATYDK---HEDKIWALAVGKKTEMFATGGSDALVNLW 533
S G+DG + +W G I H + + LAV +++ +G +D V LW
Sbjct: 277 SGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAV--VSDILCSGSADKTVRLW 330
Score = 89 (36.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 31/114 (27%), Positives = 55/114 (48%)
Query: 247 FLGEEEQYLAV-ATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGS 304
+ G +Q + V NI + V S +L+ H+ + L ALS + L+ +G
Sbjct: 223 YTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINAL---ALSGTNGSLLHSGG 279
Query: 305 KDNSVRLWDSESR---CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
D S+ +W+ + VG+ GH +V +A + + L SGS+D T+++W
Sbjct: 280 SDGSILVWERDDGGDIVVVGMLRGHTESVLCLAV---VSDILCSGSADKTVRLW 330
Score = 77 (32.2 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 18/74 (24%), Positives = 38/74 (51%)
Query: 29 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDGS 87
H VS + D +LL+S S D T+++W KC+ + + H + ++A++ +G
Sbjct: 164 HVDAVSGLAL--SRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD 221
Query: 88 TLISAGRDKVVNLW 101
+ + D+ + +W
Sbjct: 222 -IYTGSSDQRIKVW 234
Score = 61 (26.5 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 48 FSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
FS D T L +C+ATL H + S ++T G L + D VV LW+
Sbjct: 13 FSQEDHLTSSSQPL--HQCIATLVCHTASYIS-SLTLAGKRLYTGSNDGVVRLWN 64
Score = 47 (21.6 bits), Expect = 1.2e-19, Sum P(3) = 1.2e-19
Identities = 17/67 (25%), Positives = 34/67 (50%)
Query: 160 GIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYT 218
G+VR+WNA++ L E S+ I+ E G + V+ +++ L D ++ ++
Sbjct: 58 GVVRLWNANTLETLAEASSNGDVITGERGGG--GAVKSLVILADK-LFTAHQDHKIRVWK 114
Query: 219 TVEVPEK 225
+V E+
Sbjct: 115 INDVVEE 121
Score = 45 (20.9 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL--LAKKCVATLDKHFSRVTSMAITS 84
+G G V S++ D LF+ D +RVW + + ++ V K + + +M S
Sbjct: 85 RGGGGAVKSLVILADK----LFTAHQDHKIRVWKINDVVEEDVG--GKKYMHLATMPTIS 138
Query: 85 D 85
D
Sbjct: 139 D 139
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 263 (97.6 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 76/304 (25%), Positives = 135/304 (44%)
Query: 230 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 289
+L + G+ I L L + LA A+ + +++ + +Y GH ++V +
Sbjct: 9 VLERYFKGHKAAITSLD-LSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQ 67
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
S L+ + S+D +VRLW + R H V +V FS Q FL + S D
Sbjct: 68 ---FSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ-FLATASED 123
Query: 350 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
+IKVWS + + H + +P+ L+ + S+D+T +W
Sbjct: 124 KSIKVWSM----------YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
+ V F V+F+P + +A D+T+K+W + L+ ++ H+ V
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNC 233
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
SF G +++ +DG +K+ + G I T H ++ ++ K E+FA+GG+D
Sbjct: 234 ISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQ 293
Query: 530 VNLW 533
V LW
Sbjct: 294 VLLW 297
Score = 206 (77.6 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 71/264 (26%), Positives = 113/264 (42%)
Query: 234 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
R VG+ + + ++F LA A+ V+++ H+ V +D A
Sbjct: 55 RYVGHKDVVTSVQF-SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA- 112
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
G+ L T S+D S+++W + + H V FS +VS S D TIK
Sbjct: 113 -DGQFL-ATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIK 169
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W +Q +N + +V A+ D N P+ + + + D+T VW +
Sbjct: 170 IWDTTN-----KQCVNNFSDSVGFANFVDFN-----PSGTCIASAGSDQTVKVWDVRVNK 219
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
+ ++ H G+ + F P +ITAS D T+KI + +G + T +GHT V SF
Sbjct: 220 LLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279
Query: 474 TRGAQIVSCGADGLVKLWTVRTGE 497
G S GAD V LW E
Sbjct: 280 KGGELFASGGADTQVLLWRTNFDE 303
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G+D+ V VWDV +++ H G V+ I FHP + L + S D T+++ DLL +
Sbjct: 205 GSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGN--YLITASSDGTLKILDLLEGRL 262
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW--DLRDYSCK 109
+ TL H V +++ + G S G D V LW + + CK
Sbjct: 263 IYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCK 307
Score = 132 (51.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 30/102 (29%), Positives = 49/102 (48%)
Query: 9 DRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
DR V +W D G F FK H V S+ F D L + S+D +++VW + ++
Sbjct: 81 DRTVRLWIPDKRGKFSE--FKAHTAPVRSVDF--SADGQFLATASEDKSIKVWSMYRQRF 136
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+ +L +H V + DG ++S DK + +WD + C
Sbjct: 137 LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 40/138 (28%), Positives = 63/138 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D +++W+ + + GHK VV+S+ F P + LL S S D TVR+W + +
Sbjct: 39 DTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN--LLASASRDRTVRLWIPDKRGKFS 96
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV-CA--IP 125
H + V S+ ++DG L +A DK + +W + Y + Y V CA P
Sbjct: 97 EFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM--YRQRFLYSLYRHTHWVRCAKFSP 154
Query: 126 PGSAFDSFLSSYNQQTIK 143
G +S +TIK
Sbjct: 155 DGRLI---VSCSEDKTIK 169
Score = 119 (46.9 bits), Expect = 0.00098, P = 0.00098
Identities = 28/103 (27%), Positives = 44/103 (42%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
F D+ + VW + + H V F PD L+ S S+D T+++WD
Sbjct: 116 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSCSEDKTIKIWDT 173
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+CV + G+ + SAG D+ V +WD+R
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 216
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 265 (98.3 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 275 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 330
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+ +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 331 ----TGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 379
Query: 420 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 380 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 435
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 517
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 436 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 476
Score = 251 (93.4 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 314 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 367
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 368 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 421
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 422 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 477
Query: 479 IVSCGADGLVKLWTV--------RTGE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 478 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 536
Query: 530 VNLW 533
+ +W
Sbjct: 537 L-IW 539
Score = 174 (66.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 73/284 (25%), Positives = 122/284 (42%)
Query: 134 LSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 186
+S TIK + +LE I G G V D + SSD T+ EM
Sbjct: 276 VSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNTGEM 334
Query: 187 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 245
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 335 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 391
Query: 246 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 303
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 392 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 441
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 363
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 442 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDP 498
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
L + +V G+ + L ++ + + S D T +W
Sbjct: 499 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 539
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 271 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 328
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 329 VNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 386
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W+ ST
Sbjct: 387 AVNVVDFDDKYIVSASG--DRTIKVWNTST 414
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 33/116 (28%), Positives = 56/116 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL+A
Sbjct: 443 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDP 498
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD-LRDYSCKLTVP 113
C+ TL +H RV + D ++S+ D + +WD L D + + P
Sbjct: 499 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP 552
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 34/134 (25%), Positives = 65/134 (48%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 310
++Q + ++++D +++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 271 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 325
Query: 311 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 326 VWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 375
Query: 371 KAKAVVAAHGKDIN 384
+ V+ H +N
Sbjct: 376 TLRRVLVGHRAAVN 389
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD + C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 281 DNTIKIWDKNTLECKRILTGHTGSVLCLQY----DERVIITGSSDSTVRVWDVNTGEMLN 336
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + + +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 337 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPT-DITLRRV-LVGHRAAVNVVD 392
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 393 FDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 447
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLLYTTVEVPEKKMELI 230
+ D + G VL ++ L+ C+ D + ++ + K +L+
Sbjct: 448 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 493
Score = 120 (47.3 bits), Expect = 0.00098, P = 0.00098
Identities = 68/304 (22%), Positives = 133/304 (43%)
Query: 85 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 138
D ++S RD + +WD CK + T +C I GS+ DS + ++
Sbjct: 271 DDQKIVSGLRDNTIKIWDKNTLECK-RILTGHTGSVLCLQYDERVIITGSS-DSTVRVWD 328
Query: 139 QQTIKKKRRSLEIHFITV----GERGIVRMWNAD-SACLYEQKS-SDVTISFEMDDSKRG 192
T + +L H V G++ + D S +++ S +D+T+ + +
Sbjct: 329 VNT-GEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR-- 385
Query: 193 FTAATVLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEE 251
A V+ ++ ++ + D+ + ++ T E + + L G+ I L++
Sbjct: 386 -AAVNVVDFDDKYIVSASGDRTIKVWNT-----STCEFV--RTLNGHKRGIACLQY---R 434
Query: 252 EQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 311
++ + ++ ++++D+ +C VL GH E+V C+ + +I V+G+ D +++
Sbjct: 435 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RFDNKRI--VSGAYDGKIKV 489
Query: 312 WDS----ESRC-----CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSD 362
WD + R C+ H G V + F + Q +VS S D TI +W F L+D
Sbjct: 490 WDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQ--IVSSSHDDTILIWDF--LND 544
Query: 363 DAEQ 366
A Q
Sbjct: 545 PAAQ 548
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 265 (98.3 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 280 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 335
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+ +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 336 ----TGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 384
Query: 420 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 385 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 440
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 517
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 441 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 481
Score = 251 (93.4 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 319 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 372
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 373 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 426
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 427 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 482
Query: 479 IVSCGADGLVKLWTV--------RTGE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 483 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 541
Query: 530 VNLW 533
+ +W
Sbjct: 542 L-IW 544
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 74/284 (26%), Positives = 122/284 (42%)
Query: 134 LSSYNQQTIKKKRRS-LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 186
+S TIK +S LE I G G V D + SSD T+ EM
Sbjct: 281 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNTGEM 339
Query: 187 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 245
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 340 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 396
Query: 246 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 303
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 397 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 446
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 363
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 447 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDP 503
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
L + +V G+ + L ++ + + S D T +W
Sbjct: 504 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 544
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 276 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 333
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 334 VNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 391
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W+ ST
Sbjct: 392 AVNVVDFDDKYIVSASG--DRTIKVWNTST 419
Score = 132 (51.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 310
++Q + ++++D S++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 276 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 330
Query: 311 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 331 VWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 380
Query: 371 KAKAVVAAHGKDIN 384
+ V+ H +N
Sbjct: 381 TLRRVLVGHRAAVN 394
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 33/116 (28%), Positives = 56/116 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL+A
Sbjct: 448 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDP 503
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD-LRDYSCKLTVP 113
C+ TL +H RV + D ++S+ D + +WD L D + + P
Sbjct: 504 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP 557
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 55/227 (24%), Positives = 102/227 (44%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 286 DNTIKIWDKSTLECKRILTGHTGSVLCLQY----DERVIITGSSDSTVRVWDVNTGEMLN 341
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + + +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 342 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPT-DITLRRV-LVGHRAAVNVVD 397
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 398 FDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 452
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLLYTTVEVPEKKMELI 230
+ D + G VL ++ L+ C+ D + ++ + K +L+
Sbjct: 453 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 498
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 243 (90.6 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 74/263 (28%), Positives = 123/263 (46%)
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV 330
+ + L GH V+ +D +S + + S D +RLWD E+ + + G + A
Sbjct: 54 LELQWSLEGHQLGVVSVD---ISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDA- 109
Query: 331 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 390
+AFS Q+ L +G+ H KV F S E ++ + GK I S+A +P
Sbjct: 110 WTLAFSPDSQH-LATGT--HMGKVNIFGVESGKKEYSLDTR--------GKFILSIAYSP 158
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+ + +G+ D ++ + + T GH I S+ FSP Q+++TAS D IKI+
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
+ + T GH S VL +F VS +D VK+W V T CI T+ H+D++W
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVW 278
Query: 511 ALAVGKKTEMFATGGSDALVNLW 533
+ + G D ++++
Sbjct: 279 GVKYNGNGSKIVSVGDDQEIHVY 301
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 58/240 (24%), Positives = 100/240 (41%)
Query: 300 IVTGSKDNSVRLWD-SESRCCVGVGT-GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 357
+VTGS D+ V++W + R + GH V +V S L S S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLW-- 91
Query: 358 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 417
D E +K+ + A D +LA +P+ + TG+ ++ + +
Sbjct: 92 -----DLENGKQMKS---IDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYS 143
Query: 418 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 477
+ I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 478 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+V+ DG +K++ V+ T H + +A F + SD V +W T
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 46/200 (23%), Positives = 93/200 (46%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 309
+ Q+LA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 310 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 369
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 223
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
L ++ H + ++A P+D+ + S D++ VW + + TF H+ +W V+
Sbjct: 224 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVK 281
Query: 430 FSPVDQVVITASGDKTIKIW 449
++ +++ D+ I ++
Sbjct: 282 YNGNGSKIVSVGDDQEIHVY 301
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D + ++D+ G H +GH + S+ F PD+ LL + SDD ++++D+
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQ 220
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
TL H S V ++A D + +S+ DK V +WD+ +C
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++DV GH V ++ F PD D + S S D +V+VWD+ + C+
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD-DTHFV-SSSSDKSVKVWDVGTRTCIH 268
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
T H +V + +GS ++S G D+ ++++D
Sbjct: 269 TFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 37/150 (24%), Positives = 71/150 (47%)
Query: 391 NDSLVCTGSQDRTACVWRLPD--LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKI 448
N V TGS D VW+ D L + GH+ G+ SV+ S + ++S D I++
Sbjct: 31 NIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 90
Query: 449 WSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKHED 507
W + +G +K+ + +F + +Q ++ G G V ++ V +G+ + D
Sbjct: 91 WDLENGKQMKSIDAGPVDAWTLAF-SPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGK 149
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
I ++A + A+G D ++N++ +T
Sbjct: 150 FILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Score = 111 (44.1 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ I L F + Q L A++ +++YD+ + + L+GH+ VL + C
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
+ V+ S D SV++WD +R C+ H V V ++ +VS D I V
Sbjct: 245 TH---FVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHV 300
Query: 355 W 355
+
Sbjct: 301 Y 301
Score = 80 (33.2 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD++ G ++ F PD+ L +G+ V ++ + + K
Sbjct: 85 DAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQH--LATGTHMGKVNIFGVESGKKEY 142
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+LD + S+A + DG L S D ++N++D+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 243 (90.6 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 72/273 (26%), Positives = 127/273 (46%)
Query: 264 VQVYDLSS--MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCV 320
V+V+ S + + L GH V+ ++ +S + + S D +RLWD E+ +
Sbjct: 44 VKVWKWSDEKLELQWTLEGHQLGVVSVN---ISQNGAIAASSSLDAHIRLWDLETGKQIK 100
Query: 321 GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG 380
+ G + A VAFS ++ +GS H KV F S E ++ + G
Sbjct: 101 SMDAGPVDA-WTVAFSPD-SKYIATGS--HLGKVNIFGVESGKKEHSLDTR--------G 148
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 440
K I S+A +P+ + +G+ D ++ + + T GH I S+ FSP Q+++TA
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA 208
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 500
S D IKI+ + + T GH S VL +F VS +D +K+W + C+
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVN 268
Query: 501 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ H+D++W++ + G D ++++
Sbjct: 269 TFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Score = 166 (63.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 60/246 (24%), Positives = 107/246 (43%)
Query: 296 GKILIVTGSKDNSVRLWD-SESRCCVG-VGTGHMGAVGAVAFSKKLQNFLVSGSS--DHT 351
G IVTGS D+ V++W S+ + + GH V +V S QN ++ SS D
Sbjct: 31 GSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNIS---QNGAIAASSSLDAH 87
Query: 352 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD 411
I++W D E +K+ + A D ++A +P+ + TGS ++ +
Sbjct: 88 IRLW-------DLETGKQIKS---MDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVES 137
Query: 412 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRAS 471
+ + I S+ +SP + + + + D I I+ I+ G L T EGH + +
Sbjct: 138 GKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 197
Query: 472 FLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 531
F +V+ DG +K++ V+ T H + ++A F + SD +
Sbjct: 198 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIK 257
Query: 532 LWHDST 537
+W S+
Sbjct: 258 VWDTSS 263
Score = 156 (60.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 40/127 (31%), Positives = 64/127 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D + ++D+ G H +GH + S+ F PD+ LL + SDD ++++D+
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQ 220
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAV 121
TL H S V S+A + D + +S+ DK + +WD SC T ++ V +V
Sbjct: 221 HANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSV 280
Query: 122 CAIPPGS 128
P GS
Sbjct: 281 KYNPTGS 287
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 30/94 (31%), Positives = 49/94 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++DV GH V S+ F PD D + S S D +++VWD ++ CV
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPD-DTHFV-SSSSDKSIKVWDTSSRSCVN 268
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
T H +V S+ GS ++SAG D+ ++++D
Sbjct: 269 TFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 136 (52.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 35/119 (29%), Positives = 56/119 (47%)
Query: 421 HKRGIWSVEF--SPVD--QVVITASGDKTIKIWSISDGSC-LK-TFEGHTSSVLRASFLT 474
H+ IW+ + S D + ++T S D +K+W SD L+ T EGH V+ +
Sbjct: 15 HEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQ 74
Query: 475 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
GA S D ++LW + TG+ I + D W +A ++ ATG VN++
Sbjct: 75 NGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIF 133
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 265 (98.3 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 371
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+ +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 372 ----TGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 420 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 421 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 476
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 517
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 517
Score = 251 (93.4 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 355 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 408
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 409 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 463 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 518
Query: 479 IVSCGADGLVKLWTV--------RTGE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 519 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 577
Query: 530 VNLW 533
+ +W
Sbjct: 578 L-IW 580
Score = 173 (66.0 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 74/284 (26%), Positives = 122/284 (42%)
Query: 134 LSSYNQQTIKKKRRS-LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 186
+S TIK +S LE I G G V D + SSD T+ EM
Sbjct: 317 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNTGEM 375
Query: 187 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 245
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 376 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 432
Query: 246 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 303
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 433 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 482
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 363
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDP 539
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
L + +V G+ + L ++ + + S D T +W
Sbjct: 540 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 580
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 369
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 370 VNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W+ ST
Sbjct: 428 AVNVVDFDDKYIVSASG--DRTIKVWNTST 455
Score = 132 (51.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 310
++Q + ++++D S++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 366
Query: 311 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 367 VWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 416
Query: 371 KAKAVVAAHGKDIN 384
+ V+ H +N
Sbjct: 417 TLRRVLVGHRAAVN 430
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 33/116 (28%), Positives = 56/116 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL+A
Sbjct: 484 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDP 539
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD-LRDYSCKLTVP 113
C+ TL +H RV + D ++S+ D + +WD L D + + P
Sbjct: 540 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP 593
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 55/227 (24%), Positives = 102/227 (44%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 322 DNTIKIWDKSTLECKRILTGHTGSVLCLQY----DERVIITGSSDSTVRVWDVNTGEMLN 377
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + + +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 378 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPT-DITLRRV-LVGHRAAVNVVD 433
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 434 FDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 488
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLLYTTVEVPEKKMELI 230
+ D + G VL ++ L+ C+ D + ++ + K +L+
Sbjct: 489 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 534
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 265 (98.3 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 371
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+ +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 372 ----TGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 420 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 421 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 476
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 517
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 517
Score = 251 (93.4 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 355 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 408
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 409 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 463 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 518
Query: 479 IVSCGADGLVKLWTV--------RTGE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 519 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 577
Query: 530 VNLW 533
+ +W
Sbjct: 578 L-IW 580
Score = 174 (66.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 73/284 (25%), Positives = 122/284 (42%)
Query: 134 LSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 186
+S TIK + +LE I G G V D + SSD T+ EM
Sbjct: 317 VSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNTGEM 375
Query: 187 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 245
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 376 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 432
Query: 246 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 303
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 433 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 482
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 363
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDP 539
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
L + +V G+ + L ++ + + S D T +W
Sbjct: 540 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 580
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 369
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 370 VNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W+ ST
Sbjct: 428 AVNVVDFDDKYIVSASG--DRTIKVWNTST 455
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 33/116 (28%), Positives = 56/116 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL+A
Sbjct: 484 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDP 539
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD-LRDYSCKLTVP 113
C+ TL +H RV + D ++S+ D + +WD L D + + P
Sbjct: 540 RAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP 593
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 34/134 (25%), Positives = 65/134 (48%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 310
++Q + ++++D +++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 366
Query: 311 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 367 VWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 416
Query: 371 KAKAVVAAHGKDIN 384
+ V+ H +N
Sbjct: 417 TLRRVLVGHRAAVN 430
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD + C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 322 DNTIKIWDKNTLECKRILTGHTGSVLCLQY----DERVIITGSSDSTVRVWDVNTGEMLN 377
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + + +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 378 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPT-DITLRRV-LVGHRAAVNVVD 433
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 434 FDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 488
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLLYTTVEVPEKKMELI 230
+ D + G VL ++ L+ C+ D + ++ + K +L+
Sbjct: 489 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 534
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 262 (97.3 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 76/304 (25%), Positives = 136/304 (44%)
Query: 230 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 289
+L + G+ I + F +Q LA A+ + +++ + ++ GH ++V +
Sbjct: 9 VLERYFKGHKAAITSVDFSPSGKQ-LATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQ 67
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
L + L+ + S+D +VRLW + R H V +V FS Q FL + S D
Sbjct: 68 FSPLGN---LLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ-FLATASED 123
Query: 350 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
+IKVW+ + + H + +P+ L+ + S+D+T +W
Sbjct: 124 KSIKVWNM----------YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
+ V F V+F+P + +A D T+KIW I L+ ++ H+ V
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNC 233
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
SF G I++ +DG +K+ + G I T H ++ ++ K E+F++GG+D
Sbjct: 234 VSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQ 293
Query: 530 VNLW 533
V LW
Sbjct: 294 VLLW 297
Score = 143 (55.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 32/105 (30%), Positives = 53/105 (50%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G+D V +WD+ +++ H G V+ + FHP + + + S D T+++ DLL +
Sbjct: 205 GSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGN--YIITASSDGTLKILDLLEGRL 262
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR-DY-SCK 109
+ TL H V +++ + G S G D V LW DY +CK
Sbjct: 263 IYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTNFDYLNCK 307
Score = 134 (52.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/100 (28%), Positives = 49/100 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR V +W D + FK H V S+ F D L + S+D +++VW++ ++ +
Sbjct: 81 DRTVRLWIPDKRGKSSEFKAHTAPVRSVDF--SADGQFLATASEDKSIKVWNMYRQRFLY 138
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+L +H V + DG ++S DK + +WD + C
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Score = 131 (51.2 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 418 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 477
F+GHK I SV+FSP + + TAS D + +W+ + + GH V F G
Sbjct: 14 FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGN 73
Query: 478 QIVSCGADGLVKLWTV-RTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 534
+ S D V+LW + G+ + + H + ++ + AT D + +W+
Sbjct: 74 LLASASRDRTVRLWIPDKRGKS-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWN 130
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 326 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
H G + V + KL+ + +S + + SFD
Sbjct: 336 HEGKIETVEINPKLEVIDLQTASPPVVDILSFD 368
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 257 (95.5 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 72/235 (30%), Positives = 114/235 (48%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L+ TG DNS+R++D +S+ V T G G V +L SGSSDH+IKVW
Sbjct: 472 LLFTGCSDNSIRVYDYKSQNMECVQT-LKGHEGPVESICYNDQYLFSGSSDHSIKVW--- 527
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D ++ L+ + H K ++++ + ND + +GS D+T VW L L T
Sbjct: 528 ----DLKK---LRCIFTLEGHDKPVHTVLL--NDKYLFSGSSDKTIKVWDLKTLECKYTL 578
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
H R + ++ S Q + + S DKTIK+W + C T +GHT V L G
Sbjct: 579 ESHARAVKTLCIS--GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICIL--GTN 634
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ S D +++W +++ EC AT H+ + + + K +F T D + +W
Sbjct: 635 LYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKL-LF-TASDDNTIKIW 687
Score = 196 (74.1 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 49/194 (25%), Positives = 90/194 (46%)
Query: 341 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 400
N L +G SD++I+V+ + + N++ + H + S+ ND + +GS
Sbjct: 471 NLLFTGCSDNSIRVYDY--------KSQNMECVQTLKGHEGPVESICY--NDQYLFSGSS 520
Query: 401 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 460
D + VW L L + T GH + + +V + D+ + + S DKTIK+W + C T
Sbjct: 521 DHSIKVWDLKKLRCIFTLEGHDKPVHTVLLN--DKYLFSGSSDKTIKVWDLKTLECKYTL 578
Query: 461 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 520
E H +V + G + S D +K+W ++T C T H + + + T +
Sbjct: 579 ESHARAV--KTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICI-LGTNL 635
Query: 521 FATGGSDALVNLWH 534
++ G D + +W+
Sbjct: 636 YS-GSYDKTIRVWN 648
Score = 192 (72.6 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 59/183 (32%), Positives = 91/183 (49%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D + VWD+ C +GH V ++L + DK LFSGS D T++VWDL
Sbjct: 515 LFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLN---DK-YLFSGSSDKTIKVWDLK 570
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAV 121
+C TL+ H V ++ I+ G L S DK + +WDL+ + C T+ + + V +
Sbjct: 571 TLECKYTLESHARAVKTLCIS--GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTI 628
Query: 122 CAIPPGSAFDSFLSSYNQQTIKK-KRRSLEIHFITVG-ERGIVRMWNADSACLYEQKSSD 179
C + G+ + + SY++ TI+ +SLE G +R + M D L S D
Sbjct: 629 CIL--GT--NLYSGSYDK-TIRVWNLKSLECSATLRGHDRWVEHMVICDK--LLFTASDD 681
Query: 180 VTI 182
TI
Sbjct: 682 NTI 684
Score = 190 (71.9 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 49/192 (25%), Positives = 83/192 (43%)
Query: 342 FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQD 401
+L SGSSD TIKVW L+ K + +H + + +L ++ + +GS D
Sbjct: 554 YLFSGSSDKTIKVWDLK----------TLECKYTLESHARAVKTLCIS--GQYLFSGSND 601
Query: 402 RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE 461
+T VW L T +GH + W + + + S DKTI++W++ C T
Sbjct: 602 KTIKVWDLKTFRCNYTLKGHTK--WVTTICILGTNLYSGSYDKTIRVWNLKSLECSATLR 659
Query: 462 GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 521
GH V + + + D +K+W + T C T + H + LAV + +
Sbjct: 660 GHDRWVEHMVICDK--LLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCV 717
Query: 522 ATGGSDALVNLW 533
+ D + +W
Sbjct: 718 ISCSHDQSIRVW 729
Score = 172 (65.6 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 44/139 (31%), Positives = 70/139 (50%)
Query: 8 ADRKVLVWDVDGGF--CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 65
+D + V+D C KGH+G V SI ++ D+ LFSGS D +++VWDL +
Sbjct: 478 SDNSIRVYDYKSQNMECVQTLKGHEGPVESICYN---DQ-YLFSGSSDHSIKVWDLKKLR 533
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAI 124
C+ TL+ H V ++ + L S DK + +WDL+ CK T+ ++ V+ +C
Sbjct: 534 CIFTLEGHDKPVHTVLLND--KYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCI- 590
Query: 125 PPGSAFDSFLSSYNQQTIK 143
+ S N +TIK
Sbjct: 591 ----SGQYLFSGSNDKTIK 605
Score = 156 (60.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 67/280 (23%), Positives = 125/280 (44%)
Query: 45 SLLFSGSDDATVRVWDLLAK--KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
+LLF+G D ++RV+D ++ +CV TL H V S I + L S D + +WD
Sbjct: 471 NLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVES--ICYNDQYLFSGSSDHSIKVWD 528
Query: 103 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLEIHFITVGERG 160
L+ C T+ ++ + D +L S + +TIK ++LE +
Sbjct: 529 LKKLRCIFTLEGHDKPVHTVLLN-----DKYLFSGSSDKTIKVWDLKTLECKYTLESHAR 583
Query: 161 IVRMWNADSACLYEQKSSDVTI------SFEMDDSKRGFT--AATVLPSNQGLLCVTADQ 212
V+ L+ S+D TI +F + + +G T T+ L + D+
Sbjct: 584 AVKTLCISGQYLFSG-SNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDK 642
Query: 213 QLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSM 272
+ ++ K +E S L G++ + + ++ L A++ ++++DL ++
Sbjct: 643 TIRVWNL-----KSLEC--SATLRGHDRWVEHMVIC---DKLLFTASDDNTIKIWDLETL 692
Query: 273 SCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
C+ L GH+ V CL A+ K +++ S D S+R+W
Sbjct: 693 RCNTTLEGHNATVQCL---AVWEDKKCVISCSHDQSIRVW 729
Score = 148 (57.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/99 (32%), Positives = 54/99 (54%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D+ + VW++ C+ +GH V ++ DK LLF+ SDD T+++WDL
Sbjct: 635 LYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVI---CDK-LLFTASDDNTIKIWDLE 690
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
+C TL+ H + V +A+ D +IS D+ + +W
Sbjct: 691 TLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 147 (56.8 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
QYL +N + ++V+DL + C+Y L GH++ V + C L + + +GS D ++R+W
Sbjct: 593 QYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTI--CILGTN---LYSGSYDKTIRVW 647
Query: 313 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 360
+ +S C GH V + KL L + S D+TIK+W + L
Sbjct: 648 NLKSLECSATLRGHDRWVEHMVICDKL---LFTASDDNTIKIWDLETL 692
Score = 129 (50.5 bits), Expect = 0.00015, P = 0.00015
Identities = 73/303 (24%), Positives = 135/303 (44%)
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS--CKLTVPTYE-MVEAV 121
K + T+ + VTS D + L + D + ++D + + C T+ +E VE++
Sbjct: 452 KLIETIKGY--HVTSHLCICD-NLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESI 508
Query: 122 CAIPPGSAFDSFL-SSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSD 179
C D +L S + +IK + L F G V + L+ SSD
Sbjct: 509 CYN------DQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFSG-SSD 561
Query: 180 VTIS-FEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYT---TVEVPEKKMELILSKRL 235
TI +++ + +T + + + LC++ Q L + T++V + K + L
Sbjct: 562 KTIKVWDLKTLECKYTLESHARAVK-TLCISG-QYLFSGSNDKTIKVWDLKT-FRCNYTL 618
Query: 236 VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSS 295
G+ + + + LG L + + ++V++L S+ CS L GH V + C
Sbjct: 619 KGHTKWVTTICILGTN---LYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVIC---- 671
Query: 296 GKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
K+L T S DN++++WD E+ C GH V +A + + ++S S D +I+VW
Sbjct: 672 DKLLF-TASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWED-KKCVISCSHDQSIRVW 729
Query: 356 SFD 358
++
Sbjct: 730 GWN 732
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 267 (99.0 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 61/210 (29%), Positives = 96/210 (45%)
Query: 326 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA--AHGKDI 383
H AV + +K LV+G DH + +W+ K A+++ H I
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIG------------KPNAILSLYGHSSGI 62
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
+S+ ++ LV G+ T +W L + V T GH+ SV+F P + + S D
Sbjct: 63 DSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
+KIW I C+ T++GHT V F G +VS G D +VK+W + G+ + +
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK 182
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLW 533
HE +I +L + ATG +D V W
Sbjct: 183 SHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Score = 213 (80.0 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 58/221 (26%), Positives = 97/221 (43%)
Query: 281 HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQ 340
HS V CL SS ++L VTG +D+ V LW + GH + +V F +
Sbjct: 15 HSAAVNCLKIGRKSS-RVL-VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-E 71
Query: 341 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 400
+ +G++ TIK+W D E+ K + H + S+ P +GS
Sbjct: 72 VLVAAGAASGTIKLW-------DLEEA---KIVRTLTGHRSNCISVDFHPFGEFFASGSL 121
Query: 401 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 460
D +W + + T++GH RG+ + F+P + V++ D +K+W ++ G L F
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEF 181
Query: 461 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
+ H + F + + AD VK W + T E I +
Sbjct: 182 KSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
Score = 206 (77.6 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 61/269 (22%), Positives = 114/269 (42%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ V ++ + LK + + L +V ++ + + L GHS + D+
Sbjct: 10 QEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGI---DSVT 66
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ ++L+ G+ +++LWD E V TGH +V F F SGS D +
Sbjct: 67 FDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNL 125
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVV---AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
K+W +++ K + H + +N L P+ V +G +D VW L
Sbjct: 126 KIW-------------DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
+ F+ H+ I S++F P + ++ T S D+T+K W + + + T+ V
Sbjct: 173 TAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRC 232
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGEC 498
SF G ++ CG +K+++ C
Sbjct: 233 LSFNPDGKTVL-CGLQESLKIFSWEPIRC 260
Score = 152 (58.6 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 30/96 (31%), Positives = 47/96 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
A + +WD++ GH+ S+ FHP + SGS D +++WD+ K C+
Sbjct: 79 ASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE--FFASGSLDTNLKIWDIRKKGCI 136
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
T H V + T DG ++S G D +V +WDL
Sbjct: 137 HTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
Score = 143 (55.4 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 30/98 (30%), Positives = 46/98 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD+ C H +KGH V+ + F PD + SG +D V+VWDL A K +
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG--RWVVSGGEDNIVKVWDLTAGKLLT 179
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
H ++ S+ L + D+ V WDL +
Sbjct: 180 EFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETF 217
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWD+ G FK H+G + S+ FHP + LL +GS D TV+ WDL +
Sbjct: 162 GEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPH--EFLLATGSADRTVKFWDLETFEL 219
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+ + + V ++ DG T++ G + + ++ C
Sbjct: 220 IGSGGPETAGVRCLSFNPDGKTVL-CGLQESLKIFSWEPIRC 260
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 242 (90.2 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 72/263 (27%), Positives = 123/263 (46%)
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV 330
+ + L GH V+ +D +S + + S D +RLWD ++ + + G + A
Sbjct: 54 LDLQWSLEGHQLGVVSVD---ISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDA- 109
Query: 331 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 390
+AFS Q +L +G+ H KV F S E ++ + GK I S+A +P
Sbjct: 110 WTLAFSPDSQ-YLATGT--HVGKVNIFGVESGKKEYSLDTR--------GKFILSIAYSP 158
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+ + +G+ D ++ + + T GH I S+ FSP Q+++TAS D IKI+
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
+ + T GH S VL +F VS +D VK+W V T C+ T+ H+D++W
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Query: 511 ALAVGKKTEMFATGGSDALVNLW 533
+ + G D ++++
Sbjct: 279 GVKYNGNGSKIVSVGDDQEIHVY 301
Score = 165 (63.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 58/240 (24%), Positives = 101/240 (42%)
Query: 300 IVTGSKDNSVRLWD-SESRCCVGVGT-GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 357
+VTGS D+ V++W + R + GH V +V S L S S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLWDL 93
Query: 358 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 417
D + +Q ++ A V D +LA +P+ + TG+ ++ + +
Sbjct: 94 D----NGKQIKSIDAGPV------DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 143
Query: 418 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 477
+ I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 478 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+V+ DG +K++ V+ T H + +A F + SD V +W T
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 156 (60.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 48/200 (24%), Positives = 93/200 (46%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 309
+ QYLA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 310 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 369
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 223
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
L ++ H + ++A P+D+ + S D++ VW + V TF H+ +W V+
Sbjct: 224 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVK 281
Query: 430 FSPVDQVVITASGDKTIKIW 449
++ +++ D+ I ++
Sbjct: 282 YNGNGSKIVSVGDDQEIHVY 301
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D + ++D+ G H +GH + S+ F PD+ LL + SDD ++++D+
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQ 220
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
TL H S V ++A D + +S+ DK V +WD+ +C
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Score = 143 (55.4 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 41/211 (19%), Positives = 94/211 (44%)
Query: 326 HMGAVGAVAF-SKKLQNF--LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 382
H A+ +VA+ + K +N +V+GS D +KVW + ++ ++L+ + H
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKW------CDERLDLQWS--LEGHQLG 66
Query: 383 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 442
+ S+ ++ + + S D +W L + + + W++ FSP Q + T +
Sbjct: 67 VVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTH 126
Query: 443 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 502
+ I+ + G + + +L ++ G + S DG++ ++ + TG+ + T
Sbjct: 127 VGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL 186
Query: 503 DKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ H I +L +++ T D + ++
Sbjct: 187 EGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Score = 125 (49.1 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + ++DV GH V ++ F PD D + S S D +V+VWD+ + CV
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD-DTHFV-SSSSDKSVKVWDVGTRTCVH 268
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
T H +V + +GS ++S G D+ ++++D
Sbjct: 269 TFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 112 (44.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 34/121 (28%), Positives = 56/121 (46%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ I L F + Q L A++ +++YD+ + + L+GH+ VL + C
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
+ V+ S D SV++WD +R CV H V V ++ +VS D I V
Sbjct: 245 TH---FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHV 300
Query: 355 W 355
+
Sbjct: 301 Y 301
Score = 84 (34.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD+D G ++ F PD+ L +G+ V ++ + + K
Sbjct: 85 DAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQ--YLATGTHVGKVNIFGVESGKKEY 142
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+LD + S+A + DG L S D ++N++D+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 255 (94.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 62/235 (26%), Positives = 101/235 (42%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
LI S D R+ D ++ + + GH G V +FS +N+L+S S D T+++WS
Sbjct: 495 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPD-RNYLLSCSEDGTVRLWSLQ 553
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+ H + +P +G DR A +W + F
Sbjct: 554 TFT----------CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 603
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH + F P + T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 604 AGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRF 663
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ + DG V LW + G + H D I+AL + E+ A+G D V LW
Sbjct: 664 LATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLW 718
Score = 240 (89.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 72/242 (29%), Positives = 116/242 (47%)
Query: 265 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG- 323
++ D + S +L GHS V + S + +++ S+D +VRLW ++ C+ VG
Sbjct: 506 RIMDEKTASELKILYGHSGPVY---GTSFSPDRNYLLSCSEDGTVRLWSLQTFTCL-VGY 561
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
GH V FS + VSG D ++W+ D QP+ + A H D+
Sbjct: 562 KGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHY-----QPLR-----IFAGHLADV 610
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
PN + + TGS DRT +W + + V F GHK I S+ FSP + + T + D
Sbjct: 611 TCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATD 670
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW-TVRTGECIAT 501
+ +W I G + +GHT ++ F +R +I++ G+ D V+LW V+ E + T
Sbjct: 671 GRVLLWDIGHGLMVGELKGHTDTIYALRF-SRDGEILASGSMDNTVRLWDAVKAFEDLET 729
Query: 502 YD 503
D
Sbjct: 730 DD 731
Score = 226 (84.6 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 54/201 (26%), Positives = 94/201 (46%)
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDA-EQPMNLKAKA---VVAAHGKDINSLAVAPND 392
KKL++ V ++D ++ D SDD E+ M+ K + ++ H + + +P+
Sbjct: 482 KKLRS--VKAAADLSL----IDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDR 535
Query: 393 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
+ + + S+D T +W L +V ++GH +W +FSP ++ D+ ++W+
Sbjct: 536 NYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD 595
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
L+ F GH + V F I + AD V+LW V G C+ + H+ I +L
Sbjct: 596 HYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 655
Query: 513 AVGKKTEMFATGGSDALVNLW 533
A ATG +D V LW
Sbjct: 656 AFSPNGRFLATGATDGRVLLW 676
Score = 200 (75.5 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 63/256 (24%), Positives = 113/256 (44%)
Query: 197 TVLPSNQGLLCVTADQQLLLYTTVEVPEKKM-ELILS--KRLVGYNEEILDLKFLGEEEQ 253
+V P + AD L+ + +V E+ M E S K L G++ + F +
Sbjct: 478 SVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSF-SPDRN 536
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
YL + V+++ L + +C GH+ V DT S V+G D RLW
Sbjct: 537 YLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVW--DT-QFSPYGYYFVSGGHDRVARLWA 593
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 373
++ + + GH+ V F N++ +GS+D T+++W +N
Sbjct: 594 TDHYQPLRIFAGHLADVTCTRFHPN-SNYIATGSADRTVRLWDV----------LNGNCV 642
Query: 374 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 433
+ H I+SLA +PN + TG+ D +W + + V +GH I+++ FS
Sbjct: 643 RIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRD 702
Query: 434 DQVVITASGDKTIKIW 449
+++ + S D T+++W
Sbjct: 703 GEILASGSMDNTVRLW 718
Score = 165 (63.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 44/146 (30%), Positives = 62/146 (42%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
ADR V +WDV G C F GHKG + S+ F P+ L +G+ D V +WD+ V
Sbjct: 627 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNG--RFLATGATDGRVLLWDIGHGLMV 684
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
L H + ++ + DG L S D V LWD L + +P
Sbjct: 685 GELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPEN 744
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHF 153
S D L +Y + K + +HF
Sbjct: 745 SQ-DLLLGTY----MTKSTPVVHLHF 765
Score = 144 (55.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 40/151 (26%), Positives = 64/151 (42%)
Query: 383 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 442
+ ++ + + S++ G D T VW V+ R K + + S +D+ S
Sbjct: 453 LTAVDITDDSSMIVGGFADSTVRVWS----VTPKKLRSVKA---AADLSLIDK----ESD 501
Query: 443 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 502
D +I S LK GH+ V SF ++SC DG V+LW+++T C+ Y
Sbjct: 502 DVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGY 561
Query: 503 DKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
H +W F +GG D + LW
Sbjct: 562 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 592
Score = 142 (55.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 33/97 (34%), Positives = 48/97 (49%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G DR +W D F GH V+ FHP+++ + +GS D TVR+WD+L C
Sbjct: 584 GHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN--YIATGSADRTVRLWDVLNGNC 641
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
V H + S+A + +G L + D V LWD+
Sbjct: 642 VRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI 678
Score = 128 (50.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 34/114 (29%), Positives = 56/114 (49%)
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
Y+A + V+++D+ + +C + GH + L A S + TG+ D V LWD
Sbjct: 621 YIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL---AFSPNGRFLATGATDGRVLLWD 677
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW----SFDGLSDD 363
VG GH + A+ FS+ + L SGS D+T+++W +F+ L D
Sbjct: 678 IGHGLMVGELKGHTDTIYALRFSRDGE-ILASGSMDNTVRLWDAVKAFEDLETD 730
Score = 115 (45.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 31/104 (29%), Positives = 43/104 (41%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH G V F PD ++ L S S+D TVR+W L C+ H V + G
Sbjct: 521 GHSGPVYGTSFSPD--RNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 578
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGSAF 130
+S G D+V LW Y L + + + C P S +
Sbjct: 579 YFVSGGHDRVARLWATDHYQ-PLRIFAGHLADVTCTRFHPNSNY 621
Score = 82 (33.9 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 20/66 (30%), Positives = 30/66 (45%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
D SL+ SDD R+ D + L H V + + D + L+S D V LW
Sbjct: 492 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWS 551
Query: 103 LRDYSC 108
L+ ++C
Sbjct: 552 LQTFTC 557
Score = 60 (26.2 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKK 65
D S++ G D+TVRVW + KK
Sbjct: 461 DSSMIVGGFADSTVRVWSVTPKK 483
Score = 57 (25.1 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 41 DTDKSLLFSGSDDATVRVW---DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKV 97
D+DK +A RV + L C T + +T++ IT D S ++ D
Sbjct: 414 DSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADST 473
Query: 98 VNLWDL 103
V +W +
Sbjct: 474 VRVWSV 479
Score = 41 (19.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 274 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
C Y + + +D SS +IV G D++VR+W
Sbjct: 442 CFYTFLNAYQGLTAVDITDDSS---MIVGGFADSTVRVW 477
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 264 (98.0 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 72/257 (28%), Positives = 111/257 (43%)
Query: 291 CA-LSSGKILIVTGSKDNSVRLW----DSES---RCCVGVGTG------HMGAVGAVAFS 336
CA S +I G +++ +RLW D +S V G H G V FS
Sbjct: 329 CAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFS 388
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
+L+S S D + ++WS D + A H + +A P
Sbjct: 389 PD-NKYLLSCSEDASARLWSVDTKT----------ALVAYKGHTGPVWDVAFGPFGHYFA 437
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
T S D+TA +W + + F GH + V F P V+T S DKT ++W + G
Sbjct: 438 TASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHS 497
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 516
++ F GHT V + G + S ++GL+ LW + TG I T H I++L+ +
Sbjct: 498 VRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSR 557
Query: 517 KTEMFATGGSDALVNLW 533
++ + +GGSD V W
Sbjct: 558 ESTVLVSGGSDCTVRAW 574
Score = 245 (91.3 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 58/194 (29%), Positives = 94/194 (48%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+++ S+D S RLW +++ + GH G V VAF ++ + S D T ++WS D
Sbjct: 394 LLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGP-FGHYFATASHDQTAQLWSCDH 452
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+ P+ V A H D++ + PN + V TGS D+T +W + SV F
Sbjct: 453 I-----YPLR-----VFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFN 502
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQI 479
GH + + +V +P + +A + I +W I G +KT GH ++ SF +
Sbjct: 503 GHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVL 562
Query: 480 VSCGADGLVKLWTV 493
VS G+D V+ W V
Sbjct: 563 VSGGSDCTVRAWDV 576
Score = 224 (83.9 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 49/200 (24%), Positives = 94/200 (47%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK----AV-VAAHGKDINSLAVAPNDSLVCT 397
+ G + I++WS +D P + + +V + +H + +P++ + +
Sbjct: 339 IACGFQESYIRLWSIK--ADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLS 396
Query: 398 GSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCL 457
S+D +A +W + ++V ++GH +W V F P TAS D+T ++WS L
Sbjct: 397 CSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPL 456
Query: 458 KTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 517
+ F GH S V +F A +++ +D +LW V G + ++ H + A+A+
Sbjct: 457 RVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPD 516
Query: 518 TEMFATGGSDALVNLWHDST 537
A+ S+ L++LW T
Sbjct: 517 GHTMASADSEGLIHLWDIGT 536
Score = 156 (60.0 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ +W D + F GH V + FHP++ + + +GS D T R+WD+ V
Sbjct: 442 DQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNS--AYVLTGSSDKTCRLWDVHRGHSVR 499
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+ H VT++AI DG T+ SA + +++LWD+
Sbjct: 500 VFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDI 534
Score = 145 (56.1 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 65/253 (25%), Positives = 104/253 (41%)
Query: 158 ERGIVRMWN--ADSACLYEQKS-SDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQL 214
+ +R+W+ AD L + S D S + T P N+ LL + D
Sbjct: 344 QESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASA 403
Query: 215 LLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC 274
L++ + K L+ K G+ + D+ F G Y A A++ + Q++ +
Sbjct: 404 RLWSV----DTKTALVAYK---GHTGPVWDVAF-GPFGHYFATASHDQTAQLWSCDHIYP 455
Query: 275 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 334
V AGH V C+ T +S +L TGS D + RLWD V V GH V AVA
Sbjct: 456 LRVFAGHLSDVDCV-TFHPNSAYVL--TGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVA 512
Query: 335 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL 394
+ + + S S+ I +W D +K + H +I SL+ + ++
Sbjct: 513 IAPD-GHTMASADSEGLIHLW-------DIGTGRRIKT---MRGHRGNIYSLSFSRESTV 561
Query: 395 VCTGSQDRTACVW 407
+ +G D T W
Sbjct: 562 LVSGGSDCTVRAW 574
Score = 134 (52.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 32/140 (22%), Positives = 59/140 (42%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
+ L +D+ +WDV G F GH V+++ PD + S + + +WD+
Sbjct: 477 YVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHT--MASADSEGLIHLWDI 534
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV 121
+ + T+ H + S++ + + + L+S G D V WD+ + P +
Sbjct: 535 GTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV--FKTNYNNPVSSSLTG- 591
Query: 122 CAIPPGSAFDSFLSSYNQQT 141
+ P SA S + N T
Sbjct: 592 SVVTPFSAKTSTFNEVNWST 611
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 37/138 (26%), Positives = 56/138 (40%)
Query: 409 LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI-SDGSCL------KTFE 461
LP V + TF + EFSP ++ + I++WSI +D L + +
Sbjct: 312 LPS-VCMYTFHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSD 370
Query: 462 G------HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVG 515
G H+ V +F ++SC D +LW+V T + Y H +W +A G
Sbjct: 371 GSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFG 430
Query: 516 KKTEMFATGGSDALVNLW 533
FAT D LW
Sbjct: 431 PFGHYFATASHDQTAQLW 448
Score = 125 (49.1 bits), Expect = 0.00034, P = 0.00034
Identities = 35/165 (21%), Positives = 67/165 (40%)
Query: 382 DINSLAVAPNDSLVCTGSQDRTACVWR-------LPDLVSV------VTFRGHKRGIWSV 428
++N +P+ +++ G Q+ +W LP SV V H ++
Sbjct: 326 NMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGT 385
Query: 429 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 488
FSP ++ +++ S D + ++WS+ + L ++GHT V +F G + D
Sbjct: 386 TFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTA 445
Query: 489 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+LW+ + + H + + + TG SD LW
Sbjct: 446 QLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLW 490
Score = 52 (23.4 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 314
+A A + + ++D+ + + GH + L + S ++V+G D +VR WD
Sbjct: 520 MASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSL---SFSRESTVLVSGGSDCTVRAWDV 576
Query: 315 -ESRCCVGVGTGHMGAVGAVAFSKKLQNF 342
++ V + G+V FS K F
Sbjct: 577 FKTNYNNPVSSSLTGSV-VTPFSAKTSTF 604
Score = 50 (22.7 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
C + F ++ F PD+ +++ G ++ +R+W + A K K + TS+
Sbjct: 316 CMYTFHHTNNNMNCAEFSPDS--TMIACGFQESYIRLWSIKADK------KSLPKSTSVE 367
Query: 82 ITSDGST-LIS 91
SDGS L+S
Sbjct: 368 -DSDGSVRLLS 377
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 241 (89.9 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 73/255 (28%), Positives = 122/255 (47%)
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV 330
+ + L GH V+ +D +S + + S D +RLWD E+ + + G + A
Sbjct: 54 LDLQWSLEGHQLGVVSVD---ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDA- 109
Query: 331 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 390
+AFS Q +L +G+ H KV F S E ++ + GK I S+A +P
Sbjct: 110 WTLAFSPDSQ-YLATGT--HVGKVNIFGVESGKKEYSLDTR--------GKFILSIAYSP 158
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+ + +G+ D ++ + + T GH I S+ FSP Q+++TAS D IKI+
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
+ + T GH S VL +F VS +D VK+W V T C+ T+ H+D++W
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Query: 511 ALAV-GKKTEMFATG 524
+ G +++ + G
Sbjct: 279 GVKYNGNGSKIVSVG 293
Score = 163 (62.4 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 58/240 (24%), Positives = 100/240 (41%)
Query: 300 IVTGSKDNSVRLWD-SESRCCVGVGT-GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 357
+VTGS D+ V++W + R + GH V +V S L S S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLW-- 91
Query: 358 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 417
D E +K+ + A D +LA +P+ + TG+ ++ + +
Sbjct: 92 -----DLENGKQIKS---IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 143
Query: 418 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 477
+ I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 478 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+V+ DG +K++ V+ T H + +A F + SD V +W T
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 147 (56.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L GA D + ++D+ G H +GH + S+ F PD+ LL + SDD ++++D+
Sbjct: 163 LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQ 220
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
TL H S V ++A D + +S+ DK V +WD+ +C
Sbjct: 221 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 266
Score = 146 (56.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 48/194 (24%), Positives = 90/194 (46%)
Query: 251 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 309
+ QYLA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 310 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 369
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 223
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
L ++ H + ++A P+D+ + S D++ VW + V TF H+ +W V+
Sbjct: 224 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVK 281
Query: 430 FSPVDQVVITASGD 443
++ +++ GD
Sbjct: 282 YNGNGSKIVSV-GD 294
Score = 143 (55.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 46/212 (21%), Positives = 94/212 (44%)
Query: 326 HMGAVGAVAF-SKKLQNF--LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 382
H A+ +VA+ + K +N +V+GS D +KVW + D + + VV+ D
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSV---D 71
Query: 383 IN-SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 441
I+ +L +A + SL D +W L + + + W++ FSP Q + T +
Sbjct: 72 ISHTLPIAASSSL------DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGT 125
Query: 442 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
+ I+ + G + + +L ++ G + S DG++ ++ + TG+ + T
Sbjct: 126 HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 502 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ H I +L +++ T D + ++
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Score = 106 (42.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 29/102 (28%), Positives = 49/102 (48%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ I L F + Q L A++ +++YD+ + + L+GH+ VL + C
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
+ V+ S D SV++WD +R CV H V V ++
Sbjct: 245 TH---FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYN 283
Score = 80 (33.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 22/95 (23%), Positives = 44/95 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD++ G ++ F PD+ L +G+ V ++ + + K
Sbjct: 85 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQ--YLATGTHVGKVNIFGVESGKKEY 142
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+LD + S+A + DG L S D ++N++D+
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 252 (93.8 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 65/227 (28%), Positives = 106/227 (46%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
+L GH V + SSG +++ S+D S+R WD S + GH V + S
Sbjct: 337 ILRGHCGPVYSTRFLSDSSG---LLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDIS 393
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
+ S S D T ++WSFD P+ + A H D++ + PN + +
Sbjct: 394 P-CSLYFASASHDRTARLWSFD-----RTYPLR-----IYAGHLLDVDCVKFHPNSNYLA 442
Query: 397 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 456
TGS D+T +W SV F GH+ + ++ FSP + + +A D+ +K+W ++ G+
Sbjct: 443 TGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 457 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
K GHT ++ +F + I S D V++W +R C A D
Sbjct: 503 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPAD 549
Score = 224 (83.9 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 55/209 (26%), Positives = 88/209 (42%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH G V + F L+S S D +I+ W ++ + H +
Sbjct: 340 GHCGPVYSTRFLSDSSG-LLSCSEDMSIRYWDLRSFTNTV----------LYQGHAYPVW 388
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
L ++P + S DRTA +W + + GH + V+F P + T S DK
Sbjct: 389 DLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDK 448
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
T+++WS G+ ++ F GH VL +F G + S G D +KLW + +G
Sbjct: 449 TVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 508
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLW 533
H D I +L + + A+ D V +W
Sbjct: 509 HTDNITSLTFSPDSSLIASASMDNSVRVW 537
Score = 220 (82.5 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 58/236 (24%), Positives = 113/236 (47%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K L G+ + +FL + L+ + ++ ++ +DL S + + + GH+ V LD
Sbjct: 336 KILRGHCGPVYSTRFLSDSSGLLSCSEDMS-IRYWDLRSFTNTVLYQGHAYPVWDLD--- 391
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+S + + S D + RLW + + + GH+ V V F N+L +GS+D T+
Sbjct: 392 ISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPN-SNYLATGSTDKTV 450
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
++WS +Q +++ + H + +LA +PN + + +D+ +W L
Sbjct: 451 RLWS-------TQQGNSVR---LFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 468
RGH I S+ FSP ++ +AS D ++++W I + C +G +S ++
Sbjct: 501 TLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPADGSSSELV 556
Score = 181 (68.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 41/177 (23%), Positives = 77/177 (43%)
Query: 358 DGLSDDAEQPMNLKAKA-VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV 416
D L ++ E+ + + ++ H + S + S + + S+D + W L + V
Sbjct: 319 DILDEEEEEDDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTV 378
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
++GH +W ++ SP +AS D+T ++WS L+ + GH V F
Sbjct: 379 LYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNS 438
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ + D V+LW+ + G + + H + ALA + A+ G D + LW
Sbjct: 439 NYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLW 495
Score = 154 (59.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +W G F GH+G V ++ F P+ L S +D +++WDL +
Sbjct: 447 DKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG--KYLASAGEDQRLKLWDLASGTLYK 504
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
L H +TS+ + D S + SA D V +WD+R+ C
Sbjct: 505 ELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYC 544
Score = 142 (55.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 32/95 (33%), Positives = 47/95 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W D + + GH V + FHP+++ L +GS D TVR+W V
Sbjct: 405 DRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSN--YLATGSTDKTVRLWSTQQGNSVR 462
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H V ++A + +G L SAG D+ + LWDL
Sbjct: 463 LFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDL 497
Score = 57 (25.1 bits), Expect = 2.7e-19, Sum P(2) = 2.7e-19
Identities = 15/64 (23%), Positives = 34/64 (53%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
C + F + ++++ P++ LL +G D++ V++W L +KK + + H V+ +
Sbjct: 260 CFYAFYNTEQLLNTAEISPNS--KLLAAGFDNSCVKLWSLRSKKLKS--EPHLVDVSRIR 315
Query: 82 ITSD 85
+ D
Sbjct: 316 LACD 319
Score = 47 (21.6 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 274 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 317
C Y ++ L+T +S L+ G ++ V+LW S+
Sbjct: 260 CFYAFYNTEQL---LNTAEISPNSKLLAAGFDNSCVKLWSLRSK 300
Score = 38 (18.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 338 KLQNFLVSGSSDHTIKV 354
+L+NFL S H+ +V
Sbjct: 76 RLRNFLTDSDSQHSHEV 92
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 263 (97.6 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 66/235 (28%), Positives = 110/235 (46%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
++ +GS D ++RLW+ + V + GH V + F Q L+SGS D TI++W++
Sbjct: 285 ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFD---QCKLISGSMDKTIRIWNYR 341
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
++ + HG + L + + +L+ +GS D T +W +T
Sbjct: 342 ------------TSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSG-GKRITL 388
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
RGH + SV +V++ S D TIKIWS+ +CL TF H V S ++
Sbjct: 389 RGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPV--QSLALADSR 446
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ SC DG +K W + +C+ T H + +W +A +G D +V +W
Sbjct: 447 LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLR--LISGAHDGVVKVW 499
Score = 192 (72.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 48/162 (29%), Positives = 78/162 (48%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
+ V++ H + L + N ++ +GS D T +W L V GH G+ ++F
Sbjct: 266 QVVLSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF-- 321
Query: 433 VDQV-VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
DQ +I+ S DKTI+IW+ C+ GHT SVL +F +VS AD VKLW
Sbjct: 322 -DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLW 378
Query: 492 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
G+ I T H + ++ + + + +G D+ + +W
Sbjct: 379 HFSGGKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIW 419
Score = 184 (69.8 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 51/205 (24%), Positives = 92/205 (44%)
Query: 312 WDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLK 371
W RC V +GH V + ++N L SGS D TI++W+ +
Sbjct: 259 W-RHGRCRQVVLSGHSDGVMCLQL---VRNILASGSYDATIRLWNL----------ATFQ 304
Query: 372 AKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW--RLPDLVSVVTFRGHKRGIWSVE 429
A++ H + L + + +GS D+T +W R + +S++ GH + +
Sbjct: 305 QVALLEGHSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSECISIL--HGHTDSVLCLT 360
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
F ++++ S D T+K+W S G + T GHT V + ++S D +K
Sbjct: 361 FDST--LLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIK 417
Query: 490 LWTVRTGECIATYDKHEDKIWALAV 514
+W++ T C+ T+ H + +LA+
Sbjct: 418 IWSLETNTCLHTFSAHIGPVQSLAL 442
Score = 176 (67.0 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
+ + H +NS+ + + LV +GS D T +W L + TF H + S+ +
Sbjct: 385 RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALA- 443
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
D + + S D TIK W I C+ T GH V + +++S DG+VK+W
Sbjct: 444 -DSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIA--ADHLRLISGAHDGVVKVW- 499
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
EC+ T H + + ++A+G E+ +G D + LW
Sbjct: 500 -EACECVHTLKNHSEPVTSVALGD-CEV-VSGSEDGKIYLW 537
Score = 168 (64.2 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 39/135 (28%), Positives = 64/135 (47%)
Query: 402 RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE 461
R C WR VV GH G+ ++ V ++ + S D TI++W+++ + E
Sbjct: 254 RVECNWRHGRCRQVV-LSGHSDGVMCLQL--VRNILASGSYDATIRLWNLATFQQVALLE 310
Query: 462 GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 521
GH+S V F +++S D +++W RT ECI+ H D + L + +
Sbjct: 311 GHSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFD--STLL 366
Query: 522 ATGGSDALVNLWHDS 536
+G +D V LWH S
Sbjct: 367 VSGSADCTVKLWHFS 381
Score = 155 (59.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 40/122 (32%), Positives = 59/122 (48%)
Query: 4 LLEG-ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G AD V +W GG +GH G V+S+ D+ L+ SGSDD+T+++W L
Sbjct: 366 LVSGSADCTVKLWHFSGGKRIT-LRGHTGPVNSVRII--RDRGLVLSGSDDSTIKIWSLE 422
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC 122
C+ T H V S+A+ S L S D + WD+ C T+ + +E V
Sbjct: 423 TNTCLHTFSAHIGPVQSLALAD--SRLFSCSLDGTIKQWDIEKKKCVHTL--FGHIEGVW 478
Query: 123 AI 124
I
Sbjct: 479 EI 480
Score = 139 (54.0 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 80/283 (28%), Positives = 128/283 (45%)
Query: 44 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+++L SGS DAT+R+W+L + VA L+ H S VT + D LIS DK + +W+
Sbjct: 283 RNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF--DQCKLISGSMDKTIRIWNY 340
Query: 104 RDYSCKLTVPTYEMVEAVCAIPPGSAFDSFL--SSYNQQTIKK------KRRSLEIHFIT 155
R C +++ + ++V + FDS L S T+K KR +L H
Sbjct: 341 RTSEC-ISI-LHGHTDSVLCL----TFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGP 394
Query: 156 VGERGIVRMWNADSACLYEQKSSDVTI---SFEMDDSKRGFTAATVLPSNQGLLCVTADQ 212
V I+R D L S D TI S E + F+A + P Q L AD
Sbjct: 395 VNSVRIIR----DRG-LVLSGSDDSTIKIWSLETNTCLHTFSAH-IGPV-QSL--ALADS 445
Query: 213 QLLLYTTVEVPEKKMELILSK---RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDL 269
+L +++ K+ ++ K L G+ E + ++ + L + V+V++
Sbjct: 446 RLFS-CSLDGTIKQWDIEKKKCVHTLFGHIEGVWEI---AADHLRLISGAHDGVVKVWE- 500
Query: 270 SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
+ C + L HSE V + AL G +V+GS+D + LW
Sbjct: 501 -ACECVHTLKNHSEPVTSV---AL--GDCEVVSGSEDGKIYLW 537
Score = 117 (46.2 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D + +W++ +GH V+ + F D+ L SGS D T+R+W+
Sbjct: 286 LASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF----DQCKLISGSMDKTIRIWNYR 341
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
+C++ L H V + +T D + L+S D V LW
Sbjct: 342 TSECISILHGHTDSV--LCLTFDSTLLVSGSADCTVKLW 378
Score = 116 (45.9 bits), Expect = 6.8e-17, Sum P(2) = 6.8e-17
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
VL+GHS+ V+CL + ++ +GS D ++RLW+ + V + GH V + F
Sbjct: 268 VLSGHSDGVMCLQLV-----RNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFD 322
Query: 337 KKLQNFLVSGSSDHTIKVWSF 357
Q L+SGS D TI++W++
Sbjct: 323 ---QCKLISGSMDKTIRIWNY 340
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 260 (96.6 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 81/307 (26%), Positives = 134/307 (43%)
Query: 230 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 289
IL + G+ I F +Q +A A+ + ++ L + +Y GH ++V L
Sbjct: 9 ILERYFKGHKAAITSADFSPNCKQ-IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQ 67
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
S L+ + S+D +VRLW + + H V +V FS Q FLV+ S D
Sbjct: 68 ---FSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQ-FLVTASED 123
Query: 350 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
+IKVWS + + H + +P+ L+ + S+D+T +W
Sbjct: 124 KSIKVWSM----------YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
V F V+FSP + +A D ++IW I L+ ++ H+ V
Sbjct: 174 TSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNC 233
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
SF G +V+ +DG VK+ + G I T H ++ ++ K E+F +GG+DA
Sbjct: 234 LSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQ 293
Query: 530 VNLWHDS 536
V +W S
Sbjct: 294 VLVWRTS 300
Score = 137 (53.3 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 42/138 (30%), Positives = 65/138 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D +++W + + + GHK VV+S+ F P + LL S S D TVR+W L K +
Sbjct: 39 DTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN--LLASASRDKTVRLWVLDRKGKSS 96
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV-CA--IP 125
H + V S+ ++DG L++A DK + +W + Y + Y V CA P
Sbjct: 97 EFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM--YRQRFLYSLYRHTHWVRCAKFSP 154
Query: 126 PGSAFDSFLSSYNQQTIK 143
G +S +TIK
Sbjct: 155 DGRLI---VSCSEDKTIK 169
Score = 133 (51.9 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 27/100 (27%), Positives = 48/100 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +W +D + FK H V S+ F D L + S+D +++VW + ++ +
Sbjct: 81 DKTVRLWVLDRKGKSSEFKAHTAPVRSVDF--SADGQFLVTASEDKSIKVWSMYRQRFLY 138
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+L +H V + DG ++S DK + +WD C
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQC 178
Score = 133 (51.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G+D V +WD+ +++ H V+ + FHP + L + S D TV++ DL+ +
Sbjct: 205 GSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNS--LVTASSDGTVKILDLVEGRL 262
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
+ TL H V +++ + DG S G D V +W
Sbjct: 263 IYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 126 (49.4 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 28/103 (27%), Positives = 47/103 (45%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
F + D+ + VW + + H V F PD L+ S S+D T+++WD
Sbjct: 116 FLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSCSEDKTIKIWDT 173
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+K+CV + + +G+ + SAG D V +WD+R
Sbjct: 174 TSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIR 216
Score = 114 (45.2 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 28/79 (35%), Positives = 39/79 (49%)
Query: 25 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 84
YFKGHK ++S F P+ + + + S D + +W L H VTS+ +
Sbjct: 13 YFKGHKAAITSADFSPNCKQ--IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSP 70
Query: 85 DGSTLISAGRDKVVNLWDL 103
G+ L SA RDK V LW L
Sbjct: 71 QGNLLASASRDKTVRLWVL 89
Score = 90 (36.7 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 41/132 (31%), Positives = 59/132 (44%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 314
+A A + V+++D+ HS V CL SG L VT S D +V++ D
Sbjct: 201 IASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHP--SGNSL-VTASSDGTVKILDL 257
Query: 315 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW--SFDGLSDDAEQPMNLKA 372
+ GH G V V+FSK + F SG +D + VW SF+ + NLK
Sbjct: 258 VEGRLIYTLQGHTGPVFTVSFSKDGELF-TSGGADAQVLVWRTSFNQVHYRDPSKRNLKR 316
Query: 373 KAVVAA-HGKDI 383
+ A+ H DI
Sbjct: 317 LHLEASPHLLDI 328
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 260 (96.6 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 75/304 (24%), Positives = 134/304 (44%)
Query: 230 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 289
+L + G+ I + F +Q LA + + ++ L + ++ GH +++ +
Sbjct: 9 VLERYFKGHKAAITSVDFSPNGKQ-LATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQ 67
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
L + L+ + S+D ++RLW + R H V +V FS Q FL S S D
Sbjct: 68 FSPLGN---LLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ-FLASASED 123
Query: 350 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
+IKVW+ + + H + +P+ L+ + S+D+T +W
Sbjct: 124 KSIKVWNM----------YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
+ V F V F+P + +A D T+KIW I L+ ++ H+ V
Sbjct: 174 TNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNC 233
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
SF G +++ +DG +K+ + G I T H ++ ++ K E+F +GG+DA
Sbjct: 234 VSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQ 293
Query: 530 VNLW 533
V LW
Sbjct: 294 VLLW 297
Score = 208 (78.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 72/264 (27%), Positives = 113/264 (42%)
Query: 234 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
R VG+ + I ++F LA A+ ++++ S H+ V +D A
Sbjct: 55 RYVGHKDVITSVQF-SPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSA- 112
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
G+ L + S+D S+++W+ + + H V FS +VS S D TIK
Sbjct: 113 -DGQFL-ASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIK 169
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W +Q +N + V A N +A PN + + + D T +W +
Sbjct: 170 IWDTTN-----KQCVNNFSDFVGFA-----NFVAFNPNGTCIASAGSDHTVKIWDIRVNK 219
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
+ ++ H G+ V F P +ITAS D T+KI + +G + T +GHT V SF
Sbjct: 220 LLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279
Query: 474 TRGAQIVSCGADGLVKLWTVRTGE 497
G S GAD V LW E
Sbjct: 280 KGGELFTSGGADAQVLLWRTNFDE 303
Score = 176 (67.0 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 43/174 (24%), Positives = 73/174 (41%)
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKR 423
A P + + H I S+ +PN + TGS D +W L + GHK
Sbjct: 2 ASSPEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKD 61
Query: 424 GIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCG 483
I SV+FSP+ ++ +AS D+TI++W F+ HT+ V F G + S
Sbjct: 62 VITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASAS 121
Query: 484 ADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
D +K+W + + + +H + + + D + +W D+T
Sbjct: 122 EDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW-DTT 174
Score = 139 (54.0 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 29/95 (30%), Positives = 48/95 (50%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G+D V +WD+ +++ H G V+ + FHP + L + S D T+++ DLL +
Sbjct: 205 GSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGN--YLITASSDGTLKILDLLEGRL 262
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
+ TL H V +++ + G S G D V LW
Sbjct: 263 IYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/100 (28%), Positives = 49/100 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR + +W D + FK H V S+ F D L S S+D +++VW++ ++ +
Sbjct: 81 DRTIRLWIPDKRGKSSEFKAHTAPVRSVDF--SADGQFLASASEDKSIKVWNMYRQRFLY 138
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+L +H V + DG ++S DK + +WD + C
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 28/96 (29%), Positives = 45/96 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + VW++ + H V F PD L+ S S+D T+++WD K+CV
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+A +G+ + SAG D V +WD+R
Sbjct: 181 NFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIR 216
Score = 119 (46.9 bits), Expect = 0.00098, P = 0.00098
Identities = 41/140 (29%), Positives = 64/140 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW--DLLAKKC 66
D +++W + + GHK V++S+ F P + LL S S D T+R+W D K
Sbjct: 39 DTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGN--LLASASRDRTIRLWIPDKRGKS- 95
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV-CA-- 123
+ H + V S+ ++DG L SA DK + +W++ Y + Y V CA
Sbjct: 96 -SEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNM--YRQRFLYSLYRHTHWVRCAKF 152
Query: 124 IPPGSAFDSFLSSYNQQTIK 143
P G +S +TIK
Sbjct: 153 SPDGRLI---VSCSEDKTIK 169
Score = 119 (46.9 bits), Expect = 0.00098, P = 0.00098
Identities = 35/157 (22%), Positives = 67/157 (42%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + +WD C + F G + + F+P+ + + S D TV++WD+ K +
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNG--TCIASAGSDHTVKIWDIRVNKLLQ 222
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPG 127
H V ++ G+ LI+A D + + DL + T+ + V V G
Sbjct: 223 HYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGG 282
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRM 164
F S + Q + + E+++ V +R + R+
Sbjct: 283 ELFTS--GGADAQVLLWRTNFDELNYKDVSKRNLKRL 317
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 240 (89.5 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 64/215 (29%), Positives = 109/215 (50%)
Query: 325 GHMGAVGAVAF--SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 382
GH V +V+ KL+ +VS S D + VW+ + +DD + AK + H +
Sbjct: 19 GHSDWVTSVSTPTDPKLKT-IVSASRDKKLIVWNIN--TDDDSGEIGT-AKKSLTGHSQA 74
Query: 383 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 442
IN ++++ + +GS D + +W L ++ +F GH ++SV FSP ++ +++AS
Sbjct: 75 INDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASR 134
Query: 443 DKTIKIWSISDGSCLKTF--EGHTSSV--LRASFLTRGAQIVSCGADGLVKLWTVRTGEC 498
DKTIK+W+ C T + HT + +R S A IVSCG D LVK+W ++ +
Sbjct: 135 DKTIKLWNTL-AQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDL 193
Query: 499 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ H + + + + A+GG D + LW
Sbjct: 194 NKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 62/264 (23%), Positives = 114/264 (43%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
L GHS+ + + ++SS + ++GS D+SVRLWD + GH V +V+FS
Sbjct: 68 LTGHSQAI---NDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSP 124
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL--AVAPNDSLV 395
+ +VS S D TIK+W+ L+ K H I + + +PN +++
Sbjct: 125 DNRQ-IVSASRDKTIKLWNT--LAQ-------CKYTITDQQHTDWITCVRFSPSPNQAII 174
Query: 396 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
+ D+ VW L + GH + +V SP + + D K+W + +G
Sbjct: 175 VSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK 234
Query: 456 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT-YDKHEDKI---W- 510
L + E T S + + + + D +++W + + I+ Y + KI W
Sbjct: 235 HLYSLE--TGSTINSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWC 292
Query: 511 -ALAVGKKTEMFATGGSDALVNLW 533
+L ++ G +D + ++
Sbjct: 293 TSLTWSANGQLLYCGSTDGNIYVY 316
Score = 144 (55.7 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 1 MFALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
+FAL D V +WD+ G F GH V S+ F PD + + S S D T+++W+
Sbjct: 85 LFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQ--IVSASRDKTIKLWN 142
Query: 61 LLAK-KCVATLDKHFSRVTSMAITS--DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE- 116
LA+ K T +H +T + + + + ++S G DK+V +W+L++ + +
Sbjct: 143 TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTG 202
Query: 117 MVEAVCAIPPGS 128
++ V P GS
Sbjct: 203 VLNTVTISPDGS 214
Score = 136 (52.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 33/123 (26%), Positives = 60/123 (48%)
Query: 9 DRKVLVWDVD-----G--GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
D+K++VW+++ G G GH ++ + +D SGS D +VR+WDL
Sbjct: 44 DKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSI--SSDGLFALSGSWDHSVRLWDL 101
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV 121
+ + + H S V S++ + D ++SA RDK + LW+ CK T+ + + +
Sbjct: 102 SLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLA-QCKYTITDQQHTDWI 160
Query: 122 CAI 124
+
Sbjct: 161 TCV 163
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 42/177 (23%), Positives = 83/177 (46%)
Query: 9 DRKVLVWDVDGGFCTHYF--KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
D+ + +W+ C + + H ++ + F P +++++ S D V+VW+L K C
Sbjct: 135 DKTIKLWNTLAQ-CKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNL--KNC 191
Query: 67 VAT--LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI 124
L+ H + ++ I+ DGS S G+D V LWD+++ ++ T + ++C
Sbjct: 192 DLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFS 251
Query: 125 PPG----SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIV----RMWNADSACLY 173
P +A D F+ +N ++ K EI+ + + G+ W+A+ LY
Sbjct: 252 PCDYWLCAATDRFIRIWN---LESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLY 305
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 30/125 (24%), Positives = 59/125 (47%)
Query: 420 GHKRGIWSVEFSPVD---QVVITASGDKTIKIWSISD-------GSCLKTFEGHTSSVLR 469
GH + SV +P D + +++AS DK + +W+I+ G+ K+ GH+ ++
Sbjct: 19 GHSDWVTSVS-TPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAIND 77
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
S + G +S D V+LW + GE I ++ H +++++ + D
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 530 VNLWH 534
+ LW+
Sbjct: 138 IKLWN 142
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 240 (89.5 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 64/215 (29%), Positives = 109/215 (50%)
Query: 325 GHMGAVGAVAF--SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 382
GH V +V+ KL+ +VS S D + VW+ + +DD + AK + H +
Sbjct: 19 GHSDWVTSVSTPTDPKLKT-IVSASRDKKLIVWNIN--TDDDSGEIGT-AKKSLTGHSQA 74
Query: 383 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 442
IN ++++ + +GS D + +W L ++ +F GH ++SV FSP ++ +++AS
Sbjct: 75 INDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASR 134
Query: 443 DKTIKIWSISDGSCLKTF--EGHTSSV--LRASFLTRGAQIVSCGADGLVKLWTVRTGEC 498
DKTIK+W+ C T + HT + +R S A IVSCG D LVK+W ++ +
Sbjct: 135 DKTIKLWNTL-AQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDL 193
Query: 499 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ H + + + + A+GG D + LW
Sbjct: 194 NKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 62/264 (23%), Positives = 114/264 (43%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
L GHS+ + + ++SS + ++GS D+SVRLWD + GH V +V+FS
Sbjct: 68 LTGHSQAI---NDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSP 124
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL--AVAPNDSLV 395
+ +VS S D TIK+W+ L+ K H I + + +PN +++
Sbjct: 125 DNRQ-IVSASRDKTIKLWNT--LAQ-------CKYTITDQQHTDWITCVRFSPSPNQAII 174
Query: 396 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
+ D+ VW L + GH + +V SP + + D K+W + +G
Sbjct: 175 VSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK 234
Query: 456 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT-YDKHEDKI---W- 510
L + E T S + + + + D +++W + + I+ Y + KI W
Sbjct: 235 HLYSLE--TGSTINSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWC 292
Query: 511 -ALAVGKKTEMFATGGSDALVNLW 533
+L ++ G +D + ++
Sbjct: 293 TSLTWSANGQLLYCGSTDGNIYVY 316
Score = 144 (55.7 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 1 MFALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
+FAL D V +WD+ G F GH V S+ F PD + + S S D T+++W+
Sbjct: 85 LFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQ--IVSASRDKTIKLWN 142
Query: 61 LLAK-KCVATLDKHFSRVTSMAITS--DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE- 116
LA+ K T +H +T + + + + ++S G DK+V +W+L++ + +
Sbjct: 143 TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTG 202
Query: 117 MVEAVCAIPPGS 128
++ V P GS
Sbjct: 203 VLNTVTISPDGS 214
Score = 136 (52.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 33/123 (26%), Positives = 60/123 (48%)
Query: 9 DRKVLVWDVD-----G--GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
D+K++VW+++ G G GH ++ + +D SGS D +VR+WDL
Sbjct: 44 DKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSI--SSDGLFALSGSWDHSVRLWDL 101
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV 121
+ + + H S V S++ + D ++SA RDK + LW+ CK T+ + + +
Sbjct: 102 SLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLA-QCKYTITDQQHTDWI 160
Query: 122 CAI 124
+
Sbjct: 161 TCV 163
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 42/177 (23%), Positives = 83/177 (46%)
Query: 9 DRKVLVWDVDGGFCTHYF--KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
D+ + +W+ C + + H ++ + F P +++++ S D V+VW+L K C
Sbjct: 135 DKTIKLWNTLAQ-CKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNL--KNC 191
Query: 67 VAT--LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI 124
L+ H + ++ I+ DGS S G+D V LWD+++ ++ T + ++C
Sbjct: 192 DLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFS 251
Query: 125 PPG----SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIV----RMWNADSACLY 173
P +A D F+ +N ++ K EI+ + + G+ W+A+ LY
Sbjct: 252 PCDYWLCAATDRFIRIWN---LESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLY 305
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 30/125 (24%), Positives = 59/125 (47%)
Query: 420 GHKRGIWSVEFSPVD---QVVITASGDKTIKIWSISD-------GSCLKTFEGHTSSVLR 469
GH + SV +P D + +++AS DK + +W+I+ G+ K+ GH+ ++
Sbjct: 19 GHSDWVTSVS-TPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAIND 77
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
S + G +S D V+LW + GE I ++ H +++++ + D
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 530 VNLWH 534
+ LW+
Sbjct: 138 IKLWN 142
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 191 (72.3 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 45/130 (34%), Positives = 59/130 (45%)
Query: 399 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
S D T +W + T GH + SV P +++AS DKTIK+W + G C+K
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI----WALAV 514
TF GH V G I SC D V++W V T EC A +HE + WA
Sbjct: 61 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 120
Query: 515 GKKTEMFATG 524
+ ATG
Sbjct: 121 SYSSISEATG 130
Score = 160 (61.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 500
S D TIK+W C++T GH +V + + G IVS D +K+W V+TG C+
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 501 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ H + + + + + A+ +D V +W
Sbjct: 61 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 93
Score = 159 (61.0 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 36/125 (28%), Positives = 57/125 (45%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 2 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCV 59
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H V + DG+ + S D+ V +W + CK + +E V + P
Sbjct: 60 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 119
Query: 128 SAFDS 132
S++ S
Sbjct: 120 SSYSS 124
Score = 140 (54.3 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 30/117 (25%), Positives = 58/117 (49%)
Query: 347 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 406
S+D TIK+W F G + + M+ H +++S+A+ PN + + S+D+T +
Sbjct: 1 SADMTIKLWDFQGF--ECIRTMH--------GHDHNVSSVAIMPNGDHIVSASRDKTIKM 50
Query: 407 WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGH 463
W + V TF GH+ + V + ++ + S D+T+++W ++ C H
Sbjct: 51 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH 107
Score = 134 (52.2 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 51 SDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKL 110
S D T+++WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 111 TVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 143
T + E V + P S N QT++
Sbjct: 61 TFTGHR--EWVRMVRPNQDGTLIASCSNDQTVR 91
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH V +LFH + + S +DD T+RVWD K+C+ TL+ H VTS+
Sbjct: 134 GHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP 191
Query: 88 TLISAGRDKVVNLWDLR 104
+++ D+ V +W+ R
Sbjct: 192 YVVTGSVDQTVKVWECR 208
Score = 109 (43.4 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 36/148 (24%), Positives = 61/148 (41%)
Query: 388 VAPND--SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 445
V PN +L+ + S D+T VW + R H+ + + ++P
Sbjct: 72 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYS-------- 123
Query: 446 IKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKH 505
SIS+ + + GH + V F + G I+SC D +++W + C+ T + H
Sbjct: 124 ----SISEATGSEV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 177
Query: 506 EDKIWALAVGKKTEMFATGGSDALVNLW 533
E + +L K TG D V +W
Sbjct: 178 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 205
Score = 106 (42.4 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQI 479
GH + V F + +++ + DKT+++W + C+KT H V F +
Sbjct: 134 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 193
Query: 480 VSCGADGLVKLWTVR 494
V+ D VK+W R
Sbjct: 194 VTGSVDQTVKVWECR 208
Score = 105 (42.0 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 24/92 (26%), Positives = 46/92 (50%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++++D C + GH V + A+ IV+ S+D ++++W+ ++ CV
Sbjct: 6 IKLWDFQGFECIRTMHGHDHNV---SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 62
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
TGH V V ++ + S S+D T++VW
Sbjct: 63 TGHREWVRMVRPNQD-GTLIASCSNDQTVRVW 93
Score = 96 (38.9 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
S GK I++ + D ++R+WD +++ C+ H V ++ F K ++V+GS D T+K
Sbjct: 146 SGGKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP-YVVTGSVDQTVK 203
Query: 354 VW 355
VW
Sbjct: 204 VW 205
Score = 93 (37.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 30/129 (23%), Positives = 56/129 (43%)
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 363
S D +++LWD + C+ GH V +VA + +VS S D TIK+W +
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GDHIVSASRDKTIKMW-------E 52
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKR 423
+ +K H + + + + +L+ + S D+T VW + R H+
Sbjct: 53 VQTGYCVKT---FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 109
Query: 424 GIWSVEFSP 432
+ + ++P
Sbjct: 110 VVECISWAP 118
Score = 82 (33.9 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 438
H + + + + + D+T VW + + T H+ + S++F V+
Sbjct: 135 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 194
Query: 439 TASGDKTIKIW 449
T S D+T+K+W
Sbjct: 195 TGSVDQTVKVW 205
Score = 72 (30.4 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 25/87 (28%), Positives = 35/87 (40%)
Query: 321 GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG 380
G GH V V F F++S + D T++VW + N + + AH
Sbjct: 130 GSEVGHDNWVRGVLFHSG-GKFILSCADDKTLRVWDYK----------NKRCMKTLNAHE 178
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVW 407
+ SL V TGS D+T VW
Sbjct: 179 HFVTSLDFHKTAPYVVTGSVDQTVKVW 205
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 17/100 (17%), Positives = 45/100 (45%)
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 296
G++ + + + + ++ A+ + ++++++ + C GH E V + +
Sbjct: 22 GHDHNVSSVAIMPNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP---NQD 77
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
LI + S D +VR+W ++ C H V ++++
Sbjct: 78 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 117
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 215 (80.7 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 54/202 (26%), Positives = 97/202 (48%)
Query: 340 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA-----KAVVAAH---GKDINSLAVAPN 391
Q ++VSGS DHT++VW +D P N + K H G + ++
Sbjct: 457 QPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPYFVHTLIGHTDSVRTISGY 516
Query: 392 DSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
++ +GS D + +WR+ + RGH I+SV + P + I+ S DK+I++W +
Sbjct: 517 GDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDL 576
Query: 452 SDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWA 511
S G+C EGH + V + +++S AD +++W + TG+ + + I +
Sbjct: 577 STGTCKYVLEGHDAFVTLLNVFQN--RLISGSADSTIRIWDLNTGKPLMVLPSNSGYISS 634
Query: 512 LAVGKKTEMFATGGSDALVNLW 533
V + ++ + G+D V LW
Sbjct: 635 F-VSDEHKIIS--GNDGSVKLW 653
Score = 198 (74.8 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 80/309 (25%), Positives = 135/309 (43%)
Query: 230 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 289
+L RL G+ E + +K E L + + V+V+++ C+++ GH I+ CL+
Sbjct: 382 VLEARLEGHKEGVWAVKI---HENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLE 438
Query: 290 TCALSS----G-KIL------IVTGSKDNSVRLW---------------DSESRCCVGVG 323
S G +I+ IV+GS+D+++R+W +S R
Sbjct: 439 ILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPY 498
Query: 324 TGH--MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGK 381
H +G +V + LVSGS D +I++W E +L+ H
Sbjct: 499 FVHTLIGHTDSVRTISGYGDILVSGSYDSSIRIWRVS----TGECLYHLRG------HSL 548
Query: 382 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 441
I S+ P ++ +GS D++ VW L GH + + +I+ S
Sbjct: 549 RIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNV--FQNRLISGS 606
Query: 442 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
D TI+IW ++ G L ++ + +SF++ +I+S G DG VKLW VRTG+ +
Sbjct: 607 ADSTIRIWDLNTGKPLMVLPSNSGYI--SSFVSDEHKIIS-GNDGSVKLWDVRTGKLLRF 663
Query: 502 YDKHEDKIW 510
KIW
Sbjct: 664 LLTDLTKIW 672
Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 34/112 (30%), Positives = 60/112 (53%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+ D + +W V G C ++ +GH + S+L+ P+ +++ SGS D ++RVWDL
Sbjct: 520 LVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPE--RNICISGSMDKSIRVWDLS 577
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT 114
C L+ H + VT + + + LIS D + +WDL + +P+
Sbjct: 578 TGTCKYVLEGHDAFVTLLNVFQN--RLISGSADSTIRIWDLNTGKPLMVLPS 627
Score = 124 (48.7 bits), Expect = 0.00048, P = 0.00048
Identities = 54/209 (25%), Positives = 91/209 (43%)
Query: 15 WDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHF 74
W+ + F H GH V +I + D +L SGS D+++R+W + +C+ L H
Sbjct: 493 WEKNPYF-VHTLIGHTDSVRTISGYGD----ILVSGSYDSSIRIWRVSTGECLYHLRGHS 547
Query: 75 SRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI-----PPGSA 129
R+ S+ + + IS DK + +WDL +CK + ++ + + GSA
Sbjct: 548 LRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNRLISGSA 607
Query: 130 FDSFLSSYNQQTIKK----KRRSLEI-------HFITVGERGIVRMWNADSACLYEQKSS 178
DS + ++ T K S I H I G G V++W+ + L +
Sbjct: 608 -DSTIRIWDLNTGKPLMVLPSNSGYISSFVSDEHKIISGNDGSVKLWDVRTGKLLRFLLT 666
Query: 179 DVTISFEMD-DSKRGFTAATVLPSNQGLL 206
D+T + +D D+ R A V +Q L
Sbjct: 667 DLTKIWHVDFDAMR--CVAAVQRDDQAYL 693
Score = 102 (41.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 33/129 (25%), Positives = 56/129 (43%)
Query: 410 PDLVSVVT-FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 468
PD +V+ R H +W + + D + +I W + + T GHT SV
Sbjct: 455 PDQPYIVSGSRDHTLRVWKLPKN-TDPPYLP-DNTNSIDRWE-KNPYFVHTLIGHTDSVR 511
Query: 469 RASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 528
S G +VS D +++W V TGEC+ H +I+++ + + +G D
Sbjct: 512 TISGY--GDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDK 569
Query: 529 LVNLWHDST 537
+ +W ST
Sbjct: 570 SIRVWDLST 578
Score = 98 (39.6 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVV--------SSILFHP----DTDKSLLFSG 50
L+ G+ D+ V VW+++ CTH F+GH ++ S ++ H + D+ + SG
Sbjct: 404 LVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSG 463
Query: 51 SDDATVRVWDL 61
S D T+RVW L
Sbjct: 464 SRDHTLRVWKL 474
Score = 85 (35.0 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 86
+GHK V ++ H +T L SGS D TVRVW++ KC H S + + I
Sbjct: 388 EGHKEGVWAVKIHENT----LVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVP- 442
Query: 87 STLISAG 93
S LI G
Sbjct: 443 SRLIRHG 449
Score = 78 (32.5 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 32 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLIS 91
+++S+L H D + + SGS T+++ + + A L+ H V ++ I + TL+S
Sbjct: 353 MITSLLLHKD--RIITTSGS--GTIQIHNAITGVLEARLEGHKEGVWAVKIHEN--TLVS 406
Query: 92 AGRDKVVNLWDLRDYSC 108
DK V +W++ C
Sbjct: 407 GSIDKTVRVWNIEKAKC 423
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 230 (86.0 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 62/250 (24%), Positives = 113/250 (45%)
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
+S L+ TGS D R+W +G H G + A+ ++KK N+++S D T
Sbjct: 240 NSDGTLLATGSYDGFARIWTENGNLASTLGQ-HKGPIFALKWNKK-GNYILSAGVDKTTI 297
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W D + +A+Q + A D++ N++ + S D V RL
Sbjct: 298 IW--DAHTGEAKQQFPFHS-----APALDVDW----QNNTTFASCSTDMCIHVCRLGCDR 346
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
V TF+GH + ++++ P ++ + S D T+KIWS+ +C+ + H + +
Sbjct: 347 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWS 406
Query: 474 TRGA---------QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 524
G + S D V+LW + G C T KH++ ++++A + A+G
Sbjct: 407 PTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASG 466
Query: 525 GSDALVNLWH 534
D V++W+
Sbjct: 467 SFDKCVHIWN 476
Score = 168 (64.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 44/171 (25%), Positives = 76/171 (44%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH V A+ + L S S D T+K+WS D + K +
Sbjct: 353 GHTNEVNAIKWDPSGM-LLASCSDDMTLKIWSMK--QDACVHNLQAHRKEIYTIKWSPTG 409
Query: 385 SLAVAPNDSLV-CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
PN S++ + S D T +W + V T R H+ ++SV FSP + + + S D
Sbjct: 410 PTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFD 469
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
K + IW+ GS + +++G T + + +G ++ + +DG V + +R
Sbjct: 470 KCVHIWNTQSGSLVHSYQG-TGGIFEVCWNAQGDKVGASASDGSVCVLDLR 519
Score = 163 (62.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 64/273 (23%), Positives = 115/273 (42%)
Query: 277 VLAGH-SEIVLCLDTCALSSGKILIVTGSKDNSVRLW---DSESRCCVGVGTGHMGAVGA 332
VL GH SE+ +C A + L+ +GS D++ R+W ++ SR + H G
Sbjct: 170 VLRGHESEVFIC----AWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGG 225
Query: 333 --VAFSKKLQNFLVSGSSDHTI-KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVA 389
V +K + + + +SD T+ S+DG + + NL + + H I +L
Sbjct: 226 HDVPSNKDVTS--LDWNSDGTLLATGSYDGFARIWTENGNLAS--TLGQHKGPIFALKWN 281
Query: 390 PNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW 449
+ + + D+T +W + F H V++ + + S D I +
Sbjct: 282 KKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQN-NTTFASCSTDMCIHVC 340
Query: 450 SISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI 509
+ +KTF+GHT+ V + G + SC D +K+W+++ C+ H +I
Sbjct: 341 RLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEI 400
Query: 510 WALA---VGKKTE------MFATGGSDALVNLW 533
+ + G T M A+ D+ V LW
Sbjct: 401 YTIKWSPTGPTTSNPNSSIMLASASFDSTVRLW 433
Score = 156 (60.0 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 39/166 (23%), Positives = 75/166 (45%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ--- 435
H ++N++ P+ L+ + S D T +W + V + H++ I+++++SP
Sbjct: 354 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTS 413
Query: 436 ------VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
++ +AS D T+++W + G C T H V +F G + S D V
Sbjct: 414 NPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVH 473
Query: 490 LWTVRTGECIATYDKHE---DKIWALAVGKKTEMFATGGSDALVNL 532
+W ++G + +Y + W A G K A+ GS +++L
Sbjct: 474 IWNTQSGSLVHSYQGTGGIFEVCWN-AQGDKVGASASDGSVCVLDL 518
Score = 141 (54.7 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHP------DTDKSLLF-SGSDDATVRVWDL 61
D + +W + C H + H+ + +I + P + + S++ S S D+TVR+WD+
Sbjct: 376 DMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDM 435
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
C TL KH V S+A + DG L S DK V++W+ + S
Sbjct: 436 EQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGS 481
Score = 129 (50.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 56/213 (26%), Positives = 93/213 (43%)
Query: 338 KLQNFLVSGS---SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL 394
K Q +V+G+ ++H+ K DG D E P N KA V+ H ++ A P L
Sbjct: 136 KNQEAIVNGAHAINNHS-KPMEIDG---DVEIPPN-KA-TVLRGHESEVFICAWNPVSDL 189
Query: 395 VCTGSQDRTACVWRLPD--------LVSVVTFR--GH----KRGIWSVEFSPVDQVVITA 440
+ +GS D TA +W L + LV R GH + + S++++ ++ T
Sbjct: 190 LASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATG 249
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 500
S D +IW+ +G+ T H + + +G I+S G D +W TGE
Sbjct: 250 SYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQ 308
Query: 501 TYDKHEDKIWALAVG-KKTEMFATGGSDALVNL 532
+ H AL V + FA+ +D +++
Sbjct: 309 QFPFHSAP--ALDVDWQNNTTFASCSTDMCIHV 339
Score = 125 (49.1 bits), Expect = 0.00025, P = 0.00025
Identities = 48/158 (30%), Positives = 70/158 (44%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
F+GH V++I + P LL S SDD T+++W + CV L H + ++ +
Sbjct: 351 FQGHTNEVNAIKWDPSG--MLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPT 408
Query: 86 GST---------LISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGS-----AF 130
G T L SA D V LWD+ C T+ + E V +V P G +F
Sbjct: 409 GPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSF 468
Query: 131 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRM-WNA 167
D + +N Q+ SL +H G GI + WNA
Sbjct: 469 DKCVHIWNTQS-----GSL-VHSYQ-GTGGIFEVCWNA 499
Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
Identities = 36/143 (25%), Positives = 66/143 (46%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD-GS----------CLK 458
P+ +V+ RGH+ ++ ++PV ++ + SGD T +IW++++ GS C++
Sbjct: 165 PNKATVL--RGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIR 222
Query: 459 TFEGH----TSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 514
GH V + + G + + DG ++WT G +T +H+ I+AL
Sbjct: 223 E-GGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWT-ENGNLASTLGQHKGPIFALKW 280
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
KK + G D +W T
Sbjct: 281 NKKGNYILSAGVDKTTIIWDAHT 303
Score = 116 (45.9 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 32/130 (24%), Positives = 60/130 (46%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD--- 289
K G+ E+ +K+ LA ++ ++++ + +C + L H + + +
Sbjct: 349 KTFQGHTNEVNAIKW-DPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSP 407
Query: 290 ---TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
T + + I++ + S D++VRLWD E C H V +VAFS +L SG
Sbjct: 408 TGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPD-GKYLASG 466
Query: 347 SSDHTIKVWS 356
S D + +W+
Sbjct: 467 SFDKCVHIWN 476
Score = 89 (36.4 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
++D +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 240 NSDGTLLATGSYDGFARIWTENGN-LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTII 298
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 299 WDAHTGEAKQQFP 311
Score = 77 (32.2 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 27/89 (30%), Positives = 41/89 (46%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD---KHFSR------- 76
+GH+ V ++P +D LL SGS D+T R+W+L A+ +H R
Sbjct: 172 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVP 229
Query: 77 ----VTSMAITSDGSTLISAGRDKVVNLW 101
VTS+ SDG+ L + D +W
Sbjct: 230 SNKDVTSLDWNSDGTLLATGSYDGFARIW 258
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 261 (96.9 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 85/333 (25%), Positives = 146/333 (43%)
Query: 219 TVEVPEKKMELILSK-RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV 277
T VP K+ + + + + I ++F + ++LA N V+++ + +
Sbjct: 278 TSNVPNKEPPISVQLLHTLEHTSVICYVRF-SADGKFLATGCN-RAAMVFNVETGKLITL 335
Query: 278 LAGHS---EIVLCLDTCALS-SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAV 333
L S E L + + A S GK L TG +D +R+WD + + TGH + ++
Sbjct: 336 LQEESSKREGDLYVRSVAFSPDGKYL-ATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSL 394
Query: 334 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD-INSLAVAPND 392
FSK + LVSGS D T+ +W + EQ + L H D + ++ +P+
Sbjct: 395 DFSKDGKT-LVSGSGDRTVCLWDVEA----GEQKLIL--------HTDDGVTTVMFSPDG 441
Query: 393 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
+ GS D+ +W + V GH+ ++SV FSP + +++ S D TIK+W +
Sbjct: 442 QFIAAGSLDKVIRIWTSSGTL-VEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQ 500
Query: 453 ------------DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 500
G C +TF GH +L + G I+S D ++ W+ +
Sbjct: 501 CVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQL 560
Query: 501 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T H + + ++AV FATG D +W
Sbjct: 561 TLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 593
Score = 232 (86.7 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 79/259 (30%), Positives = 123/259 (47%)
Query: 200 PSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVAT 259
P + L DQQ+ ++ ++ +K++ +L+ G+ +EI L F ++ + L +
Sbjct: 356 PDGKYLATGVEDQQIRIW---DIAQKRVYRLLT----GHEQEIYSLDF-SKDGKTLVSGS 407
Query: 260 NIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC 319
V ++D+ + +L H++ + T S I GS D +R+W S S
Sbjct: 408 GDRTVCLWDVEAGEQKLIL--HTDDGVT--TVMFSPDGQFIAAGSLDKVIRIWTS-SGTL 462
Query: 320 VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLK----AKAV 375
V GH +V +VAFS +LVSGS D+TIK+W +S+ A P K K
Sbjct: 463 VEQLHGHEESVYSVAFSPD-GKYLVSGSLDNTIKLWELQCVSNVA--PSMYKEGGICKQT 519
Query: 376 VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV-SVVTFRGHKRGIWSVEFSPVD 434
H I S+ V+P+ + +GS+DRT W PD S +T +GH + SV SP
Sbjct: 520 FTGHKDFILSVTVSPDGKWIISGSKDRTIQFWS-PDSPHSQLTLQGHNNSVISVAVSPNG 578
Query: 435 QVVITASGDKTIKIWSISD 453
T SGD +IWS D
Sbjct: 579 HCFATGSGDLRARIWSYED 597
Score = 231 (86.4 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 73/255 (28%), Positives = 117/255 (45%)
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
+YLA +Q++++D++ +L GH + + LD GK L V+GS D +V LW
Sbjct: 359 KYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFS--KDGKTL-VSGSGDRTVCLW 415
Query: 313 D---SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 369
D E + + G V V FS Q F+ +GS D I++W+ G EQ
Sbjct: 416 DVEAGEQKLILHTDDG----VTTVMFSPDGQ-FIAAGSLDKVIRIWTSSGTL--VEQ--- 465
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV------------T 417
+ H + + S+A +P+ + +GS D T +W L + +V T
Sbjct: 466 ------LHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQT 519
Query: 418 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 477
F GHK I SV SP + +I+ S D+TI+ WS T +GH +SV+ + G
Sbjct: 520 FTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGH 579
Query: 478 QIVSCGADGLVKLWT 492
+ D ++W+
Sbjct: 580 CFATGSGDLRARIWS 594
Score = 148 (57.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 53/193 (27%), Positives = 88/193 (45%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
++L+ + ++ + + Q++A + + ++++ SS + L GH E V + A
Sbjct: 422 QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSV---A 477
Query: 293 LS-SGKILIVTGSKDNSVRLWD------------SESRCCVGVGTGHMGAVGAVAFSKKL 339
S GK L V+GS DN+++LW+ E C TGH + +V S
Sbjct: 478 FSPDGKYL-VSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPD- 535
Query: 340 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGS 399
+++SGS D TI+ WS D + L+ H + S+AV+PN TGS
Sbjct: 536 GKWIISGSKDRTIQFWS----PDSPHSQLTLQG------HNNSVISVAVSPNGHCFATGS 585
Query: 400 QDRTACVWRLPDL 412
D A +W DL
Sbjct: 586 GDLRARIWSYEDL 598
Score = 143 (55.4 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 39/130 (30%), Positives = 60/130 (46%)
Query: 4 LLEGADRKVLVWDVDGG----FCTHYFKGHKG--VVSSILFHPDTDKSLLFSGSDDATVR 57
L G +R +V++V+ G +G V S+ F PD L +G +D +R
Sbjct: 314 LATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDG--KYLATGVEDQQIR 371
Query: 58 VWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM 117
+WD+ K+ L H + S+ + DG TL+S D+ V LWD+ KL + T +
Sbjct: 372 IWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDG 431
Query: 118 VEAVCAIPPG 127
V V P G
Sbjct: 432 VTTVMFSPDG 441
Score = 133 (51.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 45/190 (23%), Positives = 79/190 (41%)
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD- 411
K W+ + E P++++ + H I + + + + TG +R A V+ +
Sbjct: 273 KDWTVTSNVPNKEPPISVQLLHTLE-HTSVICYVRFSADGKFLATGC-NRAAMVFNVETG 330
Query: 412 -LVSVVTFRGHKR-G---IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 466
L++++ KR G + SV FSP + + T D+ I+IW I+ + GH
Sbjct: 331 KLITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQE 390
Query: 467 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 526
+ F G +VS D V LW V GE +D + + + A G
Sbjct: 391 IYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHT-DDGVTTVMFSPDGQFIAAGSL 449
Query: 527 DALVNLWHDS 536
D ++ +W S
Sbjct: 450 DKVIRIWTSS 459
Score = 130 (50.8 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 33/102 (32%), Positives = 52/102 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+ DR V +WDV+ G GV ++++F PD + +GS D +R+W
Sbjct: 403 LVSGSGDRTVCLWDVEAGEQKLILHTDDGV-TTVMFSPDGQ--FIAAGSLDKVIRIWTS- 458
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+ V L H V S+A + DG L+S D + LW+L+
Sbjct: 459 SGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQ 500
Score = 123 (48.4 bits), Expect = 0.00050, P = 0.00050
Identities = 36/135 (26%), Positives = 59/135 (43%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL------- 61
D+ + +W G GH+ V S+ F PD L SGS D T+++W+L
Sbjct: 450 DKVIRIW-TSSGTLVEQLHGHEESVYSVAFSPDG--KYLVSGSLDNTIKLWELQCVSNVA 506
Query: 62 --LAKK---CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
+ K+ C T H + S+ ++ DG +IS +D+ + W +LT+ +
Sbjct: 507 PSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHN 566
Query: 117 -MVEAVCAIPPGSAF 130
V +V P G F
Sbjct: 567 NSVISVAVSPNGHCF 581
Score = 121 (47.7 bits), Expect = 0.00082, P = 0.00082
Identities = 26/88 (29%), Positives = 40/88 (45%)
Query: 18 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 77
+GG C F GHK + S+ PD + SGS D T++ W + TL H + V
Sbjct: 512 EGGICKQTFTGHKDFILSVTVSPDG--KWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSV 569
Query: 78 TSMAITSDGSTLISAGRDKVVNLWDLRD 105
S+A++ +G + D +W D
Sbjct: 570 ISVAVSPNGHCFATGSGDLRARIWSYED 597
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 257 (95.5 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 76/304 (25%), Positives = 134/304 (44%)
Query: 230 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 289
+L + G+ I L L + LA A+ + +++ + +Y GH ++V +
Sbjct: 9 VLERYFKGHKAAITSLD-LSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQ 67
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
S L+ + S+D +VRLW + R H V +V FS Q FL + S D
Sbjct: 68 ---FSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ-FLATASED 123
Query: 350 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
+IKVWS + + H + +P+ L+ + S+D+T +W
Sbjct: 124 KSIKVWSM----------YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
+ V F V+F+P + +A D+T+K+W + L+ ++ H+ V
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNC 233
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
SF +V+ +DG +K+ + G I T H ++ ++ K E+FA+GG+D
Sbjct: 234 ISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQ 293
Query: 530 VNLW 533
V LW
Sbjct: 294 VLLW 297
Score = 212 (79.7 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 71/264 (26%), Positives = 114/264 (43%)
Query: 234 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
R VG+ + + ++F LA A+ V+++ H+ V +D A
Sbjct: 55 RYVGHKDVVTSVQF-SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA- 112
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
G+ L T S+D S+++W + + H V FS +VS S D TIK
Sbjct: 113 -DGQFL-ATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIK 169
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W +Q +N + +V A+ D N P+ + + + D+T VW +
Sbjct: 170 IWDTTN-----KQCVNNFSDSVGFANFVDFN-----PSGTCIASAGSDQTVKVWDVRVNK 219
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
+ ++ H G+ + F P D ++TAS D T+KI + +G + T +GHT V SF
Sbjct: 220 LLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279
Query: 474 TRGAQIVSCGADGLVKLWTVRTGE 497
G S GAD V LW E
Sbjct: 280 KGGELFASGGADTQVLLWRTNFDE 303
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G+D+ V VWDV +++ H G V+ I FHP +D L+ + S D T+++ DLL +
Sbjct: 205 GSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHP-SDNYLV-TASSDGTLKILDLLEGRL 262
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW--DLRDYSCK 109
+ TL H V +++ + G S G D V LW + + CK
Sbjct: 263 IYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCK 307
Score = 132 (51.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 30/102 (29%), Positives = 49/102 (48%)
Query: 9 DRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
DR V +W D G F FK H V S+ F D L + S+D +++VW + ++
Sbjct: 81 DRTVRLWIPDKRGKFSE--FKAHTAPVRSVDF--SADGQFLATASEDKSIKVWSMYRQRF 136
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+ +L +H V + DG ++S DK + +WD + C
Sbjct: 137 LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 40/138 (28%), Positives = 63/138 (45%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D +++W+ + + GHK VV+S+ F P + LL S S D TVR+W + +
Sbjct: 39 DTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN--LLASASRDRTVRLWIPDKRGKFS 96
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV-CA--IP 125
H + V S+ ++DG L +A DK + +W + Y + Y V CA P
Sbjct: 97 EFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM--YRQRFLYSLYRHTHWVRCAKFSP 154
Query: 126 PGSAFDSFLSSYNQQTIK 143
G +S +TIK
Sbjct: 155 DGRLI---VSCSEDKTIK 169
Score = 119 (46.9 bits), Expect = 0.00090, P = 0.00090
Identities = 28/103 (27%), Positives = 44/103 (42%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
F D+ + VW + + H V F PD L+ S S+D T+++WD
Sbjct: 116 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSCSEDKTIKIWDT 173
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+CV + G+ + SAG D+ V +WD+R
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 216
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 260 (96.6 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 76/287 (26%), Positives = 131/287 (45%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ +L + + + + LA A++ V+++D + S + L GHS++V + S
Sbjct: 292 LEGHEAAVLSVSY-SHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSV---IFS 347
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
L+ + S D++V++WD+ + GH V +V FS Q L S S D T+K+
Sbjct: 348 HDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ-LLASASDDSTVKI 405
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 414
W G + + H + S+ + + L+ + S D T +W
Sbjct: 406 WD-TGTGS---------LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 455
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 474
T GH+ + SV FS +++ +AS D+T++IW GS T EGH+S V SF
Sbjct: 456 QHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSH 515
Query: 475 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 521
+ S D V++W + T+D + I A+ K T ++
Sbjct: 516 DSRLLASASNDQTVRIWDIEARSLQHTFDL-DATIEAMRFDKATSLW 561
Score = 252 (93.8 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 68/260 (26%), Positives = 112/260 (43%)
Query: 274 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAV 333
C L GH VL + + S L+ + S D +V++WD+E+ GH V +V
Sbjct: 288 CLQALEGHEAAVLSV---SYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSV 344
Query: 334 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 393
FS + L++ +SD T+K+W G + + H + S+ + +
Sbjct: 345 IFSHDSR--LLASASDSTVKIWD-TGTGS---------LQHTLEGHRDWVRSVIFSHDSQ 392
Query: 394 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
L+ + S D T +W T GH+ + SV FS Q++ +AS D T+KIW
Sbjct: 393 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 452
Query: 454 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 513
GS T EGH V F + S D V++W G T + H + +++
Sbjct: 453 GSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVS 512
Query: 514 VGKKTEMFATGGSDALVNLW 533
+ + A+ +D V +W
Sbjct: 513 FSHDSRLLASASNDQTVRIW 532
Score = 194 (73.4 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 50/140 (35%), Positives = 69/140 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V +WD G H +GH+ V S++F D+ LL S SDD TVR+WD
Sbjct: 442 DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS--RLLASASDDRTVRIWDTEKGSHKH 499
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL+ H S VTS++ + D L SA D+ V +WD+ S + T +EA+
Sbjct: 500 TLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTFDLDATIEAM------- 552
Query: 129 AFDSFLSSYNQQTIKKKRRS 148
FD S + Q T+K RS
Sbjct: 553 RFDKATSLWIQVTVKASIRS 572
Score = 188 (71.2 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 438
H + S++ + + L+ + S DRT +W T GH + SV FS +++
Sbjct: 295 HEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLA 354
Query: 439 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV-SCGADGLVKLWTVRTGE 497
+AS D T+KIW GS T EGH V R+ + +Q++ S D VK+W TG
Sbjct: 355 SAS-DSTVKIWDTGTGSLQHTLEGHRDWV-RSVIFSHDSQLLASASDDSTVKIWDTGTGS 412
Query: 498 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
T + H D + ++ +++ A+ D+ V +W T
Sbjct: 413 LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 452
Score = 173 (66.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 43/135 (31%), Positives = 64/135 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V +WD G H +GH+ V S++F D+ LL S SDD+TV++WD
Sbjct: 400 DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ--LLASASDDSTVKIWDTGTGSLQH 457
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL+ H V S+ + D L SA D+ V +WD S K T+ + + + S
Sbjct: 458 TLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDS 517
Query: 129 AFDSFLSSYNQQTIK 143
S+ N QT++
Sbjct: 518 RL--LASASNDQTVR 530
Score = 166 (63.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 36/99 (36%), Positives = 50/99 (50%)
Query: 4 LLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 63
L +D V +WD G H +GH+ V S++F D+ LL S SDD+TV++WD
Sbjct: 353 LASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ--LLASASDDSTVKIWDTGT 410
Query: 64 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
TL+ H V S+ + D L SA D V +WD
Sbjct: 411 GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 449
Score = 159 (61.0 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 58/192 (30%), Positives = 92/192 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR V +WD + G H +GH +V S++F D S L + + D+TV++WD
Sbjct: 317 DRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHD---SRLLASASDSTVKIWDTGTGSLQH 373
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPG 127
TL+ H V S+ + D L SA D V +WD S + T+ + + V +V
Sbjct: 374 TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIF---- 429
Query: 128 SAFDSFL--SSYNQQTIK---KKRRSLEIHFITVGERGIVR--MWNADSACLYEQKSSDV 180
+ DS L S+ + T+K SL+ H + G R VR +++ DS L S D
Sbjct: 430 -SHDSQLLASASDDSTVKIWDTGTGSLQ-HTLE-GHRDWVRSVIFSHDSRLL-ASASDDR 485
Query: 181 TISFEMDDSKRG 192
T+ + D+++G
Sbjct: 486 TV--RIWDTEKG 495
Score = 142 (55.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 68/272 (25%), Positives = 120/272 (44%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
C +GH+ V S+ + D+ LL S SDD TV++WD TL+ H V S+
Sbjct: 288 CLQALEGHEAAVLSVSYSHDS--RLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVI 345
Query: 82 ITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGSAFDSFL--SSYN 138
+ D S L+++ D V +WD S + T+ + + V +V + DS L S+ +
Sbjct: 346 FSHD-SRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIF-----SHDSQLLASASD 399
Query: 139 QQTIK---KKRRSLEIHFITVGERGIVR--MWNADSACLYEQKSSDVTI--------SFE 185
T+K SL+ H + G R VR +++ DS L S D T+ S +
Sbjct: 400 DSTVKIWDTGTGSLQ-HTLE-GHRDWVRSVIFSHDSQLL-ASASDDSTVKIWDTGTGSLQ 456
Query: 186 MD-DSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILD 244
+ R + + + + LL +D + + E K L G++ +
Sbjct: 457 HTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHK------HTLEGHSSLVTS 510
Query: 245 LKFLGEEEQYLAVATNIEQVQVYDLSSMSCSY 276
+ F + + LA A+N + V+++D+ + S +
Sbjct: 511 VSF-SHDSRLLASASNDQTVRIWDIEARSLQH 541
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 262 (97.3 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 82/307 (26%), Positives = 140/307 (45%)
Query: 227 MELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVL 286
M L ++L+ + E + + F E +A N QV +++ ++ + ++ +
Sbjct: 2 MRLDFQRKLLSHTERVKAVDFHPTEPWVIASHYN-GQVGIWNYNTQT---LVRSFDINDV 57
Query: 287 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
+ CA + K V GS D VR+++ + V H + A+ Q FL++
Sbjct: 58 PIRACAFIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPT-QPFLLTS 116
Query: 347 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGS-QDRTAC 405
S D TIK +++D M+ K H + + SLA+ P D+ S D T
Sbjct: 117 SDDMTIKCFNWD---------MSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVK 167
Query: 406 VWRLPDLVSVVTFRGHKRGIWSVEFSPV-DQ-VVITASGDKTIKIWSISDGSCLKTFEGH 463
VW V+ T + H RG+ V + P D+ +ITA D IK+W +C++ EGH
Sbjct: 168 VWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGH 227
Query: 464 TSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 523
T++V A F ++ I+S DG VK+W + I +Y+ D+ W +A K +
Sbjct: 228 TNNVSFAFFHSKFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNGLVTV 287
Query: 524 GGSDALV 530
G + L+
Sbjct: 288 GFDNGLI 294
Score = 210 (79.0 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 68/307 (22%), Positives = 124/307 (40%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
L H+E V +D + ++ + V +W+ ++ V + + A AF
Sbjct: 10 LLSHTERVKAVD---FHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIA 66
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 397
+ +N+ V GS D ++V++++ E+ +A H I +L V P + T
Sbjct: 67 R-KNWFVCGSDDFQVRVYNYN----TGEKVTQFEA------HPDYIRALVVHPTQPFLLT 115
Query: 398 GSQDRTA-CV-WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG-DKTIKIWSISDG 454
S D T C W + V TF GH R + S+ +P D +S D T+K+WS
Sbjct: 116 SSDDMTIKCFNWDM-SWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSS 174
Query: 455 SCLKTFEGHTSSVLRASFLTRGAQ--IVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
T + H V ++ G + +++ G D L+K+W +T C+ + H + +
Sbjct: 175 VANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFA 234
Query: 513 AVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAIQ 572
K + +G D V +WH + Q +N ++ + +
Sbjct: 235 FFHSKFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNGLVTVGFDNGL- 293
Query: 573 VAFELRR 579
+ F L R
Sbjct: 294 ITFSLGR 300
Score = 134 (52.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 29/99 (29%), Positives = 42/99 (42%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V VW + H V+ + ++P DK L + DD ++VWD K CV
Sbjct: 163 DGTVKVWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVR 222
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
L+ H + V+ S +IS D V +W YS
Sbjct: 223 ILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWHTLSYS 261
Score = 123 (48.4 bits), Expect = 0.00073, P = 0.00073
Identities = 46/155 (29%), Positives = 72/155 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV--WDLLAKKC 66
D +V V++ + G F+ H + +++ HP T LL S SDD T++ WD+ + KC
Sbjct: 77 DFQVRVYNYNTGEKVTQFEAHPDYIRALVVHP-TQPFLLTS-SDDMTIKCFNWDM-SWKC 133
Query: 67 VATLDKHFSRVTSMAIT-SDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAI 124
V T + H V S+AI D +T S+ D V +W T+ ++ V V
Sbjct: 134 VQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQAHDRGVNYVNYY 193
Query: 125 PPG-------SAFDSFLSSYNQQTIKKKRRSLEIH 152
P G + D+ + ++ QT K R LE H
Sbjct: 194 PAGDKPYLITAGDDNLIKVWDYQT-KACVRILEGH 227
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 258 (95.9 bits), Expect = 6.4e-19, P = 6.4e-19
Identities = 72/244 (29%), Positives = 120/244 (49%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+IVTGS D++VR+WD + + H AV + FS L +V+ S D +I VW
Sbjct: 265 VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL---MVTCSKDRSIAVW--- 318
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 319 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 372
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 373 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 428
Query: 479 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 429 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 487
Query: 530 VNLW 533
+ +W
Sbjct: 488 L-IW 490
Score = 184 (69.8 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 72/286 (25%), Positives = 125/286 (43%)
Query: 131 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 189
+ +S +IK + SLE + G G V D + SSD T+ + D
Sbjct: 224 EKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 280
Query: 190 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 243
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 281 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN 340
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 301
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 341 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 390
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 391 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 447
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D L + +V G+ + L ++ + + S D T +W
Sbjct: 448 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW 490
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
++SG D++IK+W D S L+ V+ H + L + ++ ++ TGS D
Sbjct: 226 IISGLRDNSIKIW--DKTS--------LECLKVLTGHTGSV--LCLQYDERVIVTGSSDS 273
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS---DGSCLKT 459
T VW + + T H + + FS + +++T S D++I +W ++ D + +
Sbjct: 274 TVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASPTDITLRRV 331
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 332 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 387
Query: 520 MFATGGSDALVNLW 533
+ +G SD + LW
Sbjct: 388 LVVSGSSDNTIRLW 401
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 222 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 279
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F + G +V+C D + +W + + I H
Sbjct: 280 VNTGEVLNTLIHHNEAVLHLRF-SNGL-MVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 337
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W ST
Sbjct: 338 AVNVVDFDDKYIVSASG--DRTIKVWSTST 365
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 232 DNSIKIWDKTSLECLKVLTGHTGSVLCLQY----DERVIVTGSSDSTVRVWDVNTGEVLN 287
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + S+G +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 288 TLIHHNEAVLHLRF-SNG-LMVTCSKDRSIAVWDMASPT-DITLRRV-LVGHRAAVNVVD 343
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 344 FDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 398
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 399 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 430
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL A
Sbjct: 394 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDP 449
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL +H RV + D +IS+ D + +WD
Sbjct: 450 RAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 491
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 257 (95.5 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 72/244 (29%), Positives = 119/244 (48%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+IVTGS D++VR+WD S + H AV + F L +V+ S D +I VW
Sbjct: 277 VIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNGL---MVTCSKDRSIAVW--- 330
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 331 ----DMASPTDISLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 384
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 385 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 440
Query: 479 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 441 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 499
Query: 530 VNLW 533
+ +W
Sbjct: 500 L-IW 502
Score = 184 (69.8 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 77/303 (25%), Positives = 133/303 (43%)
Query: 131 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 189
+ +S +IK +++LE I G G V D + SSD T+ + D
Sbjct: 236 EKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 292
Query: 190 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 243
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 293 NSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVN 352
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 301
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 353 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 402
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 403 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 459
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGH 421
D L + +V G+ + L ++ + + S D T +W D ++V T G
Sbjct: 460 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW---DFLNVST-NGQ 512
Query: 422 KRG 424
G
Sbjct: 513 TEG 515
Score = 160 (61.4 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 48/194 (24%), Positives = 90/194 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
++SG D++IK+W D + L+ ++ H + L + ++ ++ TGS D
Sbjct: 238 IISGLRDNSIKIW-------DKQ---TLECLKILTGHTGSV--LCLQYDERVIVTGSSDS 285
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS---DGSCLKT 459
T VW + + T H + + F + +++T S D++I +W ++ D S +
Sbjct: 286 TVRVWDVNSGEVLNTLIHHNEAVLHLRFC--NGLMVTCSKDRSIAVWDMASPTDISLRRV 343
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 344 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 399
Query: 520 MFATGGSDALVNLW 533
+ +G SD + LW
Sbjct: 400 LVVSGSSDNTIRLW 413
Score = 135 (52.6 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 234 DDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 291
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F G +V+C D + +W + + I+ H
Sbjct: 292 VNSGEVLNTLIHHNEAVLHLRFCN-GL-MVTCSKDRSIAVWDMASPTDISLRRVLVGHRA 349
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W ST
Sbjct: 350 AVNVVDFDDKYIVSASG--DRTIKVWSTST 377
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 32/109 (29%), Positives = 52/109 (47%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL A
Sbjct: 406 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDP 461
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
C+ TL +H RV + D +IS+ D + +WD + S
Sbjct: 462 RAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNVS 508
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00054
Identities = 66/293 (22%), Positives = 131/293 (44%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + + +
Sbjct: 244 DNSIKIWDKQTLECLKILTGHTGSVLCLQY----DERVIVTGSSDSTVRVWDVNSGEVLN 299
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR---DYSCKLTVPTYEMVEAVCAIP 125
TL H V + + +++ +D+ + +WD+ D S + + + AV +
Sbjct: 300 TLIHHNEAVLHLRFCN--GLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRA--AVNVVD 355
Query: 126 PGSAFDSFLSSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTI 182
+ +S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 356 FDDKY--IVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI 410
Query: 183 SFEMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL---YT-TVEV--------PEKKMEL 229
+ D + G VL ++ L+ C+ D + ++ Y ++V P
Sbjct: 411 --RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPAST 467
Query: 230 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHS 282
+ + LV ++ + L+F +E Q ++ +++ + + ++D ++S + G S
Sbjct: 468 LCLRTLVEHSGRVFRLQF--DEFQIIS-SSHDDTILIWDFLNVSTNGQTEGRS 517
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 236 (88.1 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 64/217 (29%), Positives = 107/217 (49%)
Query: 321 GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG 380
G GH G V ++A S + N L+SGS D T+ +W+ L+ D EQ +++ H
Sbjct: 9 GTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWN---LTRD-EQAYGYPKRSL-EGHS 63
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 440
++ ++ + + + S D++ +W L + TF GH + SV FS ++ +++
Sbjct: 64 HIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSG 123
Query: 441 SGDKTIKIWSISDGSCLKTF--EGHTS--SVLRASFLTRGAQIVSCGADGLVKLWTVRTG 496
S D+TIK+W+ G C T +GHT S +R S + IVS G D LVK+W + +
Sbjct: 124 SRDRTIKLWNTL-GDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASC 182
Query: 497 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ H I + + + A+GG D + LW
Sbjct: 183 RLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLW 219
Score = 196 (74.1 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 68/246 (27%), Positives = 116/246 (47%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRCCVGVGT----GHMGAVGA 332
L GH+ V L T +L + +L+ +GS+D ++ +W+ + G GH V
Sbjct: 11 LEGHNGWVTSLAT-SLENPNMLL-SGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSD 68
Query: 333 VAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND 392
S + +S S D ++++W LS + H D+ S++ + ++
Sbjct: 69 CVISSD-GAYALSASWDKSLRLWE---LSSG-------QTTRTFVGHTNDVLSVSFSADN 117
Query: 393 SLVCTGSQDRTACVWR-LPDLVSVVTFRGHKRGIWSVEFSPVDQ--VVITASGDKTIKIW 449
+ +GS+DRT +W L D +T +GH + V FSP Q V+++A DK +K+W
Sbjct: 118 RQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVW 177
Query: 450 SISDGSC-LKTFE-GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE- 506
++ SC L+T GHT + + G+ S G DG+ LW + + + Y H
Sbjct: 178 ELA--SCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHL--YSLHAG 233
Query: 507 DKIWAL 512
D+I AL
Sbjct: 234 DEIHAL 239
Score = 193 (73.0 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 54/181 (29%), Positives = 83/181 (45%)
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVA-PNDSLVCTGSQDRTACVWRLPDLVSVVTF---- 418
AEQ L + + H + SLA + N +++ +GS+D+T +W L +
Sbjct: 2 AEQ---LVLRGTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRS 58
Query: 419 -RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 477
GH + S ++AS DK++++W +S G +TF GHT+ VL SF
Sbjct: 59 LEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNR 118
Query: 478 QIVSCGADGLVKLWTVRTGECIATY-DKHEDKIWALAV----GKKTEMFATGGSDALVNL 532
QIVS D +KLW G+C T DK + W V + + + G D LV +
Sbjct: 119 QIVSGSRDRTIKLWNT-LGDCKYTITDKGHTE-WVSCVRFSPNPQNPVIVSAGWDKLVKV 176
Query: 533 W 533
W
Sbjct: 177 W 177
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 61/262 (23%), Positives = 120/262 (45%)
Query: 196 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYL 255
AT L + LL + D+ L+++ +++ + L G++ + D + + Y
Sbjct: 22 ATSLENPNMLLSGSRDKTLIIWNLTR--DEQAYGYPKRSLEGHSHIVSDC-VISSDGAYA 78
Query: 256 AVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE 315
A+ + +++++LSS + GH+ VL + + S+ IV+GS+D +++LW++
Sbjct: 79 LSASWDKSLRLWELSSGQTTRTFVGHTNDVLSV---SFSADNRQIVSGSRDRTIKLWNTL 135
Query: 316 SRCCVGV-GTGHMGAVGAVAFSKKLQN-FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 373
C + GH V V FS QN +VS D +KVW L+
Sbjct: 136 GDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASC--------RLQTD 187
Query: 374 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 433
+ H IN++ ++P+ SL +G +D +W L + + + I ++ FSP
Sbjct: 188 HI--GHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDE-IHALVFSP- 243
Query: 434 DQVVITASGDKTIKIWSISDGS 455
++ + A+ +I I+ + S
Sbjct: 244 NRYWLCAATSSSITIFDLEKKS 265
Score = 145 (56.1 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 45/182 (24%), Positives = 84/182 (46%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYF--KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
++ G+ DR + +W+ G C + KGH VS + F P+ ++ S D V+VW+
Sbjct: 120 IVSGSRDRTIKLWNTLGD-CKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWE 178
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 120
L + + H + ++ I+ DGS S G+D V LWDL + ++ + + A
Sbjct: 179 LASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDEIHA 238
Query: 121 VCAIPPG----SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-----IVRMWNADSAC 171
+ P +A S ++ ++ + K K L+ +I G++ + W+AD
Sbjct: 239 LVFSPNRYWLCAATSSSITIFDLEK-KSKVDELKPEYIEKGKKSREPECVSLAWSADGQT 297
Query: 172 LY 173
L+
Sbjct: 298 LF 299
Score = 143 (55.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 37/113 (32%), Positives = 61/113 (53%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
+AL D+ + +W++ G T F GH V S+ F D + + SGS D T+++W+
Sbjct: 77 YALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQ--IVSGSRDRTIKLWNT 134
Query: 62 LAKKCVATL-DK-HFSRVTSMAITSD--GSTLISAGRDKVVNLWDLRDYSCKL 110
L C T+ DK H V+ + + + ++SAG DK+V +W+L SC+L
Sbjct: 135 LGD-CKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELA--SCRL 184
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 56/246 (22%), Positives = 108/246 (43%)
Query: 4 LLEGA-DRKVLVWDVDG-----GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVR 57
LL G+ D+ +++W++ G+ +GH +VS + +D + S S D ++R
Sbjct: 31 LLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVI--SSDGAYALSASWDKSLR 88
Query: 58 VWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD-LRDYSCKLTVPTYE 116
+W+L + + T H + V S++ ++D ++S RD+ + LW+ L D CK T+
Sbjct: 89 LWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGD--CKYTITDKG 146
Query: 117 MVEAVCAI--PPGSAFDSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNAD---SA 170
E V + P +S+ + +K + S + +G G + S
Sbjct: 147 HTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSL 206
Query: 171 CLYEQKSSDVTISFEMDDSKRGFTA-------ATVLPSNQGLLCVTADQQLLLYTTVEVP 223
C K VT+ +++++SK ++ A V N+ LC + ++ +E
Sbjct: 207 CASGGKDG-VTMLWDLNESKHLYSLHAGDEIHALVFSPNRYWLCAATSSSITIFD-LEKK 264
Query: 224 EKKMEL 229
K EL
Sbjct: 265 SKVDEL 270
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 30/124 (24%), Positives = 60/124 (48%)
Query: 417 TFRGHKRGIWSVEFSPVD-QVVITASGDKTIKIWSIS-D----GSCLKTFEGHTSSVLRA 470
T GH + S+ S + ++++ S DKT+ IW+++ D G ++ EGH+ V
Sbjct: 10 TLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDC 69
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 530
+ GA +S D ++LW + +G+ T+ H + + +++ +G D +
Sbjct: 70 VISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTI 129
Query: 531 NLWH 534
LW+
Sbjct: 130 KLWN 133
Score = 51 (23.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 26/95 (27%), Positives = 38/95 (40%)
Query: 232 SKRLVGYN--EEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC------SYVLAGH-S 282
SK L + +EI L F +L AT+ + ++DL S Y+ G S
Sbjct: 224 SKHLYSLHAGDEIHALVF-SPNRYWLCAATS-SSITIFDLEKKSKVDELKPEYIEKGKKS 281
Query: 283 EIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 317
C+ + G+ L G DN +R W SR
Sbjct: 282 REPECVSLAWSADGQTLFA-GYTDNKIRAWGVMSR 315
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 252 (93.8 bits), Expect = 7.8e-18, P = 7.8e-18
Identities = 88/311 (28%), Positives = 143/311 (45%)
Query: 197 TVLPSNQGLLCV-TADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYL 255
T L + QGL V D L+ ++ + K+L ++ DL + +E +
Sbjct: 463 TFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQASDLSLIDKESDDV 521
Query: 256 AVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE 315
+E++ D + S +L GHS V + S + +++ S+D +VRLW +
Sbjct: 522 -----LERIM--DEKTASELKILYGHSGPVY---GASFSPDRNYLLSSSEDGTVRLWSLQ 571
Query: 316 SRCCVGVG-TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 374
+ C+ VG GH V FS + VSG D ++W+ D QP+
Sbjct: 572 TFTCL-VGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHY-----QPLR----- 619
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 434
+ A H D+N PN + V TGS DRT +W + + V F GHK I S+ FSP
Sbjct: 620 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 679
Query: 435 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW-T 492
+ + T + D + +W I G + +GHT +V F +R +I++ G+ D V+LW
Sbjct: 680 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF-SRDGEILASGSMDNTVRLWDA 738
Query: 493 VRTGECIATYD 503
++ E + T D
Sbjct: 739 IKAFEDLETDD 749
Score = 249 (92.7 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 61/235 (25%), Positives = 100/235 (42%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
LI S D R+ D ++ + + GH G V +FS +N+L+S S D T+++WS
Sbjct: 513 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQ 571
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+ H + +P +G DR A +W + F
Sbjct: 572 TFT----------CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 621
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH + F P V T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 622 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 681
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ + DG V LW + G + H D + +L + E+ A+G D V LW
Sbjct: 682 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 736
Score = 223 (83.6 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 53/201 (26%), Positives = 93/201 (46%)
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDA-EQPMNLKAKA---VVAAHGKDINSLAVAPND 392
KKL++ V +SD ++ D SDD E+ M+ K + ++ H + + +P+
Sbjct: 500 KKLRS--VKQASDLSL----IDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDR 553
Query: 393 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
+ + + S+D T +W L +V ++GH +W +FSP ++ D+ ++W+
Sbjct: 554 NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD 613
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
L+ F GH + V F + + AD V+LW V G C+ + H+ I +L
Sbjct: 614 HYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 673
Query: 513 AVGKKTEMFATGGSDALVNLW 533
ATG +D V LW
Sbjct: 674 TFSPNGRFLATGATDGRVLLW 694
Score = 169 (64.5 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 37/95 (38%), Positives = 47/95 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
ADR V +WDV G C F GHKG + S+ F P+ L +G+ D V +WD+ V
Sbjct: 645 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWDIGHGLMV 702
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H V S+ + DG L S D V LWD
Sbjct: 703 GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 137 (53.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G DR +W D F GH V+ FHP+++ + +GS D TVR+WD+L C
Sbjct: 602 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNC 659
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
V H + S+ + +G L + D V LWD+
Sbjct: 660 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 696
Score = 61 (26.5 bits), Expect = 9.2e-19, Sum P(2) = 9.2e-19
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKK 65
D SL+ G D+TVRVW + KK
Sbjct: 479 DSSLIAGGFADSTVRVWSVTPKK 501
Score = 60 (26.2 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 41 DTDKSLLFSGSDDATVRVW---DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDK 96
D+DK + T RV D L C T + +T++ +T D S+LI+ G D
Sbjct: 432 DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDD-SSLIAGGFADS 490
Query: 97 VVNLWDL 103
V +W +
Sbjct: 491 TVRVWSV 497
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 255 (94.8 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 89/311 (28%), Positives = 143/311 (45%)
Query: 197 TVLPSNQGLLCV-TADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYL 255
T L + QGL V D L+ ++ + K+L ++ DL + +E +
Sbjct: 465 TFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQAADLSLIDKESDDV 523
Query: 256 AVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE 315
+E++ D + S +L GHS V + S + +++ S+D +VRLW +
Sbjct: 524 -----LERIM--DEKTASELKILYGHSGPVY---GASFSPDRNYLLSSSEDGTVRLWSLQ 573
Query: 316 SRCCVGVG-TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 374
+ C+ VG GH V FS + VSG D ++W+ D QP+
Sbjct: 574 TFTCL-VGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHY-----QPLR----- 621
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 434
+ A H D+N PN + V TGS DRT +W + + V F GHK I S+ FSP
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681
Query: 435 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW-T 492
+ + T + D + +W I G + +GHT +V F +R +I++ G+ D V+LW
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF-SRDGEILASGSMDNTVRLWDA 740
Query: 493 VRTGECIATYD 503
V+ E + T D
Sbjct: 741 VKAFEDVETDD 751
Score = 249 (92.7 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 61/235 (25%), Positives = 100/235 (42%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
LI S D R+ D ++ + + GH G V +FS +N+L+S S D T+++WS
Sbjct: 515 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQ 573
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+ H + +P +G DR A +W + F
Sbjct: 574 TFT----------CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 623
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH + F P V T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 683
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ + DG V LW + G + H D + +L + E+ A+G D V LW
Sbjct: 684 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
Score = 169 (64.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 37/95 (38%), Positives = 47/95 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
ADR V +WDV G C F GHKG + S+ F P+ L +G+ D V +WD+ V
Sbjct: 647 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWDIGHGLMV 704
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H V S+ + DG L S D V LWD
Sbjct: 705 GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 149 (57.5 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 38/153 (24%), Positives = 65/153 (42%)
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 440
K + S+ A + SL+ S D + + GH ++ FSP ++++
Sbjct: 502 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 561
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 500
S D T+++WS+ +CL ++GH V F G VS G D + +LW + +
Sbjct: 562 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 621
Query: 501 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ H + + ATG +D V LW
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLW 654
Score = 137 (53.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G DR +W D F GH V+ FHP+++ + +GS D TVR+WD+L C
Sbjct: 604 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNC 661
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
V H + S+ + +G L + D V LWD+
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Score = 61 (26.5 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKK 65
D SL+ G D+TVRVW + KK
Sbjct: 481 DSSLIAGGFADSTVRVWSVTPKK 503
Score = 60 (26.2 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 41 DTDKSLLFSGSDDATVRVW---DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDK 96
D+DK + T RV D L C T + +T++ +T D S+LI+ G D
Sbjct: 434 DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDD-SSLIAGGFADS 492
Query: 97 VVNLWDL 103
V +W +
Sbjct: 493 TVRVWSV 499
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 252 (93.8 bits), Expect = 7.9e-18, P = 7.9e-18
Identities = 88/311 (28%), Positives = 143/311 (45%)
Query: 197 TVLPSNQGLLCV-TADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYL 255
T L + QGL V D L+ ++ + K+L ++ DL + +E +
Sbjct: 465 TFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQASDLSLIDKESDDV 523
Query: 256 AVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE 315
+E++ D + S +L GHS V + S + +++ S+D +VRLW +
Sbjct: 524 -----LERIM--DEKTASELKILYGHSGPVY---GASFSPDRNYLLSSSEDGTVRLWSLQ 573
Query: 316 SRCCVGVG-TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 374
+ C+ VG GH V FS + VSG D ++W+ D QP+
Sbjct: 574 TFTCL-VGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHY-----QPLR----- 621
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 434
+ A H D+N PN + V TGS DRT +W + + V F GHK I S+ FSP
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681
Query: 435 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW-T 492
+ + T + D + +W I G + +GHT +V F +R +I++ G+ D V+LW
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF-SRDGEILASGSMDNTVRLWDA 740
Query: 493 VRTGECIATYD 503
++ E + T D
Sbjct: 741 IKAFEDLETDD 751
Score = 249 (92.7 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 61/235 (25%), Positives = 100/235 (42%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
LI S D R+ D ++ + + GH G V +FS +N+L+S S D T+++WS
Sbjct: 515 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQ 573
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+ H + +P +G DR A +W + F
Sbjct: 574 TFT----------CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 623
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH + F P V T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 683
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ + DG V LW + G + H D + +L + E+ A+G D V LW
Sbjct: 684 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
Score = 223 (83.6 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 53/201 (26%), Positives = 93/201 (46%)
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDA-EQPMNLKAKA---VVAAHGKDINSLAVAPND 392
KKL++ V +SD ++ D SDD E+ M+ K + ++ H + + +P+
Sbjct: 502 KKLRS--VKQASDLSL----IDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDR 555
Query: 393 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
+ + + S+D T +W L +V ++GH +W +FSP ++ D+ ++W+
Sbjct: 556 NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD 615
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
L+ F GH + V F + + AD V+LW V G C+ + H+ I +L
Sbjct: 616 HYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 675
Query: 513 AVGKKTEMFATGGSDALVNLW 533
ATG +D V LW
Sbjct: 676 TFSPNGRFLATGATDGRVLLW 696
Score = 169 (64.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 37/95 (38%), Positives = 47/95 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
ADR V +WDV G C F GHKG + S+ F P+ L +G+ D V +WD+ V
Sbjct: 647 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWDIGHGLMV 704
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H V S+ + DG L S D V LWD
Sbjct: 705 GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 137 (53.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G DR +W D F GH V+ FHP+++ + +GS D TVR+WD+L C
Sbjct: 604 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNC 661
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
V H + S+ + +G L + D V LWD+
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Score = 61 (26.5 bits), Expect = 9.3e-19, Sum P(2) = 9.3e-19
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKK 65
D SL+ G D+TVRVW + KK
Sbjct: 481 DSSLIAGGFADSTVRVWSVTPKK 503
Score = 60 (26.2 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 41 DTDKSLLFSGSDDATVRVW---DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDK 96
D+DK + T RV D L C T + +T++ +T D S+LI+ G D
Sbjct: 434 DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDD-SSLIAGGFADS 492
Query: 97 VVNLWDL 103
V +W +
Sbjct: 493 TVRVWSV 499
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 254 (94.5 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 89/311 (28%), Positives = 143/311 (45%)
Query: 197 TVLPSNQGLLCV-TADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYL 255
T L + QGL V D L+ ++ + K+L ++ DL + +E +
Sbjct: 466 TFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQAADLSLIDKESDDV 524
Query: 256 AVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE 315
+E++ D + S +L GHS V + S + +++ S+D +VRLW +
Sbjct: 525 -----LERIM--DEKTASELKILYGHSGPVY---GASFSPDRNYLLSSSEDGTVRLWSLQ 574
Query: 316 SRCCVGVG-TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 374
+ C+ VG GH V FS + VSG D ++W+ D QP+
Sbjct: 575 TFTCL-VGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHY-----QPLR----- 622
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 434
+ A H D+N PN + V TGS DRT +W + + V F GHK I S+ FSP
Sbjct: 623 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 682
Query: 435 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW-T 492
+ + T + D + +W I G + +GHT +V F +R +I++ G+ D V+LW
Sbjct: 683 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF-SRDGEILASGSMDNTVRLWDA 741
Query: 493 VRTGECIATYD 503
V+ E + T D
Sbjct: 742 VKAFEDLETDD 752
Score = 249 (92.7 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 61/235 (25%), Positives = 100/235 (42%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
LI S D R+ D ++ + + GH G V +FS +N+L+S S D T+++WS
Sbjct: 516 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQ 574
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+ H + +P +G DR A +W + F
Sbjct: 575 TFT----------CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 624
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH + F P V T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 625 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 684
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ + DG V LW + G + H D + +L + E+ A+G D V LW
Sbjct: 685 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
Score = 169 (64.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 37/95 (38%), Positives = 47/95 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
ADR V +WDV G C F GHKG + S+ F P+ L +G+ D V +WD+ V
Sbjct: 648 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWDIGHGLMV 705
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H V S+ + DG L S D V LWD
Sbjct: 706 GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 149 (57.5 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 38/153 (24%), Positives = 65/153 (42%)
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 440
K + S+ A + SL+ S D + + GH ++ FSP ++++
Sbjct: 503 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 562
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 500
S D T+++WS+ +CL ++GH V F G VS G D + +LW + +
Sbjct: 563 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 622
Query: 501 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ H + + ATG +D V LW
Sbjct: 623 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLW 655
Score = 137 (53.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G DR +W D F GH V+ FHP+++ + +GS D TVR+WD+L C
Sbjct: 605 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVATGSADRTVRLWDVLNGNC 662
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
V H + S+ + +G L + D V LWD+
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Score = 61 (26.5 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKK 65
D SL+ G D+TVRVW + KK
Sbjct: 482 DSSLIAGGFADSTVRVWSVTPKK 504
Score = 60 (26.2 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 41 DTDKSLLFSGSDDATVRVW---DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDK 96
D+DK + T RV D L C T + +T++ +T D S+LI+ G D
Sbjct: 435 DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDD-SSLIAGGFADS 493
Query: 97 VVNLWDL 103
V +W +
Sbjct: 494 TVRVWSV 500
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 230 (86.0 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 63/252 (25%), Positives = 113/252 (44%)
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
S G +L + GS D R+W +G H G + A+ ++KK N+++S D T
Sbjct: 245 SDGTLLAM-GSYDGFARIWTENGNLASTLGQ-HKGPIFALKWNKK-GNYILSAGVDKTTI 301
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPD 411
+W D + +A+Q + + ++ + A D VC R C D
Sbjct: 302 IW--DAHTGEAKQQFPFHSAPALDVDWQNNTTFASCGTDMCIHVC-----RLGC-----D 349
Query: 412 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRAS 471
L V TF+GH + ++++ P ++ + S D T+KIWS+ +C+ + H+ +
Sbjct: 350 L-PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIK 408
Query: 472 FLTRGA---------QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFA 522
+ G + S D V+LW V G C T KH++ ++++A + A
Sbjct: 409 WSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLA 468
Query: 523 TGGSDALVNLWH 534
+G D V++W+
Sbjct: 469 SGSFDKCVHIWN 480
Score = 152 (58.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 39/166 (23%), Positives = 74/166 (44%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ--- 435
H ++N++ P+ L+ + S D T +W + V + H + I+++++SP
Sbjct: 358 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATS 417
Query: 436 ------VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
++ +AS D T+++W + G C T H V +F G + S D V
Sbjct: 418 NPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCVH 477
Query: 490 LWTVRTGECIATYDKHE---DKIWALAVGKKTEMFATGGSDALVNL 532
+W ++G + +Y + W A G K A+ GS +++L
Sbjct: 478 IWNTQSGSLVHSYQGTGGIFEVCWN-ARGDKVGASASDGSVCVLDL 522
Score = 148 (57.2 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 63/274 (22%), Positives = 114/274 (41%)
Query: 277 VLAGH-SEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVG---VGTGHMGAVG- 331
VL GH SE+ +C A + L+ +GS D++ R+W+ G + H G
Sbjct: 174 VLRGHESEVFIC----AWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGW 229
Query: 332 -AVAFSKKLQNFLVSGSSDHTI-KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVA 389
V +K + + + +SD T+ + S+DG + + NL + + H I +L
Sbjct: 230 HDVPSNKDVTS--LDWNSDGTLLAMGSYDGFARIWTENGNLAS--TLGQHKGPIFALKWN 285
Query: 390 PNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG-DKTIKI 448
+ + + D+T +W + F H V++ + + G D I +
Sbjct: 286 KKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ--NNTTFASCGTDMCIHV 343
Query: 449 WSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDK 508
+ +KTF+GHT+ V + G + SC D +K+W+++ C+ H +
Sbjct: 344 CRLGCDLPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKE 403
Query: 509 IWALA---VGKKTE------MFATGGSDALVNLW 533
I+ + G T M A+ D+ V LW
Sbjct: 404 IYTIKWSPTGPATSNPNSSIMLASASFDSTVRLW 437
Score = 138 (53.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHP------DTDKSLLF-SGSDDATVRVWDL 61
D + +W + C H + H + +I + P + + S++ S S D+TVR+WD+
Sbjct: 380 DMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDV 439
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
C TL KH V S+A + DG L S DK V++W+ + S
Sbjct: 440 EQGVCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCVHIWNTQSGS 485
Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
Identities = 47/158 (29%), Positives = 72/158 (45%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV-------T 78
F+GH V++I + P LL S SDD T+++W + CV L H + T
Sbjct: 355 FQGHTNEVNAIKWDPSG--MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 412
Query: 79 SMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGS-----AF 130
A ++ S+++ SA D V LWD+ C T+ + E V ++ P G +F
Sbjct: 413 GPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLASGSF 472
Query: 131 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRM-WNA 167
D + +N Q+ SL +H G GI + WNA
Sbjct: 473 DKCVHIWNTQS-----GSL-VHSYQ-GTGGIFEVCWNA 503
Score = 120 (47.3 bits), Expect = 0.00088, P = 0.00088
Identities = 36/144 (25%), Positives = 65/144 (45%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CLK 458
P+ +V+ RGH+ ++ ++PV ++ + SGD T +IW++++ S C++
Sbjct: 169 PNKATVL--RGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 226
Query: 459 TFEG-H----TSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 513
EG H V + + G + DG ++WT G +T +H+ I+AL
Sbjct: 227 --EGWHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWT-ENGNLASTLGQHKGPIFALK 283
Query: 514 VGKKTEMFATGGSDALVNLWHDST 537
KK + G D +W T
Sbjct: 284 WNKKGNYILSAGVDKTTIIWDAHT 307
Score = 87 (35.7 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
++D +LL GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 244 NSDGTLLAMGSYDGFARIWTENGN-LASTLGQHKGPIFALKWNKKGNYILSAGVDKTTII 302
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 303 WDAHTGEAKQQFP 315
Score = 74 (31.1 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 26/89 (29%), Positives = 42/89 (47%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-----------LAKKCVAT--LDKH 73
+GH+ V ++P +D LL SGS D+T R+W+L + + C+ D
Sbjct: 176 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGWHDVP 233
Query: 74 FSR-VTSMAITSDGSTLISAGRDKVVNLW 101
++ VTS+ SDG+ L D +W
Sbjct: 234 SNKDVTSLDWNSDGTLLAMGSYDGFARIW 262
Score = 37 (18.1 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 73 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
H S V A L S D +W+L + S
Sbjct: 178 HESEVFICAWNPVSDLLASGSGDSTARIWNLNENS 212
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 252 (93.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 68/259 (26%), Positives = 117/259 (45%)
Query: 275 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 334
+Y GH ++V + S L+ + S+D +VRLW + R H V +V
Sbjct: 11 AYRYVGHKDVVTSVQ---FSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVD 67
Query: 335 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL 394
FS Q FL + S D +IKVWS + + H + +P+ L
Sbjct: 68 FSADGQ-FLATASEDKSIKVWSM----------YRQRFLYSLYRHTHWVRCAKFSPDGRL 116
Query: 395 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 454
+ + S+D+T +W + V F V+F+P + +A D+T+K+W +
Sbjct: 117 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 176
Query: 455 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 514
L+ ++ H+ V SF G +++ +DG +K+ + G I T H ++ ++
Sbjct: 177 KLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 236
Query: 515 GKKTEMFATGGSDALVNLW 533
K E+FA+GG+D V LW
Sbjct: 237 SKGGELFASGGADTQVLLW 255
Score = 206 (77.6 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 71/264 (26%), Positives = 113/264 (42%)
Query: 234 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
R VG+ + + ++F LA A+ V+++ H+ V +D A
Sbjct: 13 RYVGHKDVVTSVQF-SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA- 70
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
G+ L T S+D S+++W + + H V FS +VS S D TIK
Sbjct: 71 -DGQFL-ATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIK 127
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W +Q +N + +V A+ D N P+ + + + D+T VW +
Sbjct: 128 IWDTTN-----KQCVNNFSDSVGFANFVDFN-----PSGTCIASAGSDQTVKVWDVRVNK 177
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
+ ++ H G+ + F P +ITAS D T+KI + +G + T +GHT V SF
Sbjct: 178 LLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 237
Query: 474 TRGAQIVSCGADGLVKLWTVRTGE 497
G S GAD V LW E
Sbjct: 238 KGGELFASGGADTQVLLWRTNFDE 261
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G+D+ V VWDV +++ H G V+ I FHP + L + S D T+++ DLL +
Sbjct: 163 GSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGN--YLITASSDGTLKILDLLEGRL 220
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW--DLRDYSCK 109
+ TL H V +++ + G S G D V LW + + CK
Sbjct: 221 IYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHCK 265
Score = 132 (51.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 30/102 (29%), Positives = 49/102 (48%)
Query: 9 DRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
DR V +W D G F FK H V S+ F D L + S+D +++VW + ++
Sbjct: 39 DRTVRLWIPDKRGKFSE--FKAHTAPVRSVDF--SADGQFLATASEDKSIKVWSMYRQRF 94
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+ +L +H V + DG ++S DK + +WD + C
Sbjct: 95 LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 136
Score = 131 (51.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 28/132 (21%), Positives = 56/132 (42%)
Query: 406 VWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS 465
+W + GHK + SV+FSP ++ +AS D+T+++W F+ HT+
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 466 SVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGG 525
V F G + + D +K+W++ + + +H + + +
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 121
Query: 526 SDALVNLWHDST 537
D + +W D+T
Sbjct: 122 EDKTIKIW-DTT 132
Score = 120 (47.3 bits), Expect = 0.00066, P = 0.00066
Identities = 39/134 (29%), Positives = 61/134 (45%)
Query: 13 LVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK 72
++W+ + + GHK VV+S+ F P + LL S S D TVR+W + +
Sbjct: 1 MLWNFKPHARAYRYVGHKDVVTSVQFSPHGN--LLASASRDRTVRLWIPDKRGKFSEFKA 58
Query: 73 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV-CA--IPPGSA 129
H + V S+ ++DG L +A DK + +W + Y + Y V CA P G
Sbjct: 59 HTAPVRSVDFSADGQFLATASEDKSIKVWSM--YRQRFLYSLYRHTHWVRCAKFSPDGRL 116
Query: 130 FDSFLSSYNQQTIK 143
+S +TIK
Sbjct: 117 I---VSCSEDKTIK 127
Score = 119 (46.9 bits), Expect = 0.00085, P = 0.00085
Identities = 28/103 (27%), Positives = 44/103 (42%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
F D+ + VW + + H V F PD L+ S S+D T+++WD
Sbjct: 74 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSCSEDKTIKIWDT 131
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+CV + G+ + SAG D+ V +WD+R
Sbjct: 132 TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 174
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 254 (94.5 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 84/340 (24%), Positives = 145/340 (42%)
Query: 220 VEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCS---- 275
VE+P K + L G+ E+ + LA + ++++LS S S
Sbjct: 155 VEIPSNKAVV-----LRGHESEVFICAW-NPVSDLLASGSGDSTARIWNLSENSTSGPTQ 208
Query: 276 YVLA-----GHSEIVLCLDTCAL--SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMG 328
VL G ++ D +L +S L+ TGS D R+W + +G H G
Sbjct: 209 LVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQ-HKG 267
Query: 329 AVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAV 388
+ A+ ++KK NF++S D T +W D + +A+Q + + + N+ A
Sbjct: 268 PIFALKWNKK-GNFILSAGVDKTTIIW--DAHTGEAKQQFPFHSAPALDVDWQSNNTFAS 324
Query: 389 APNDSL--VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTI 446
D VC QDR P + TF+GH + ++++ P ++ + S D T+
Sbjct: 325 CSTDMCIHVCKLGQDR-------P----IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTL 373
Query: 447 KIWSISDGSCLKTFEGHTSSVLRASFLTRGA---------QIVSCGADGLVKLWTVRTGE 497
KIWS+ +C+ + H + + G + S D V+LW V G
Sbjct: 374 KIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGI 433
Query: 498 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
CI T KH++ ++++A A+G D V++W+ T
Sbjct: 434 CIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT 473
Score = 158 (60.7 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 40/166 (24%), Positives = 78/166 (46%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV----- 433
H ++N++ P +L+ + S D T +W + V + H + I+++++SP
Sbjct: 348 HTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN 407
Query: 434 ----DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
+ ++ +AS D T+++W + G C+ T H V +F G + S D V
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH 467
Query: 490 LWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSDALVNL 532
+W +TG + +Y + I+ + A G K A+ GS +++L
Sbjct: 468 IWNTQTGALVHSY-RGTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD---TDKS----LLFSGSDDATVRVWDL 61
D + +W + C H + H + +I + P T+ +L S S D+TVR+WD+
Sbjct: 370 DMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV 429
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL KH V S+A + DG L S DK V++W+
Sbjct: 430 DRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Score = 123 (48.4 bits), Expect = 0.00040, P = 0.00040
Identities = 52/201 (25%), Positives = 86/201 (42%)
Query: 347 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 406
+++HT + DG D E P N KA V+ H ++ A P L+ +GS D TA +
Sbjct: 142 ANNHT-DMMEVDG---DVEIPSN-KA-VVLRGHESEVFICAWNPVSDLLASGSGDSTARI 195
Query: 407 WRLPD--------LVSVVTFR--GH----KRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
W L + LV R G + + S++++ ++ T S D +IW+
Sbjct: 196 WNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-K 254
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
DG+ T H + + +G I+S G D +W TGE + H AL
Sbjct: 255 DGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAP--AL 312
Query: 513 AVG-KKTEMFATGGSDALVNL 532
V + FA+ +D +++
Sbjct: 313 DVDWQSNNTFASCSTDMCIHV 333
Score = 85 (35.0 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+++ +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 234 NSEGTLLATGSYDGFARIWTKDGN-LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTII 292
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 293 WDAHTGEAKQQFP 305
Score = 73 (30.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-----------LAKKCVAT--LDKH 73
+GH+ V ++P +D LL SGS D+T R+W+L + + C+ D
Sbjct: 166 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVP 223
Query: 74 FSR-VTSMAITSDGSTLISAGRDKVVNLW 101
++ VTS+ S+G+ L + D +W
Sbjct: 224 SNKDVTSLDWNSEGTLLATGSYDGFARIW 252
Score = 39 (18.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 26/109 (23%), Positives = 37/109 (33%)
Query: 60 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVE 119
++ + K V L H S V A L S D +W+L + S + PT ++V
Sbjct: 156 EIPSNKAVV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENST--SGPT-QLVL 211
Query: 120 AVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNAD 168
C G S N+ S T G R+W D
Sbjct: 212 RHCIREGGQDVPS-----NKDVTSLDWNSEGTLLATGSYDGFARIWTKD 255
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 253 (94.1 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 89/311 (28%), Positives = 143/311 (45%)
Query: 197 TVLPSNQGLLCV-TADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYL 255
T L + QGL V D L+ ++ + K+L ++ DL + +E +
Sbjct: 466 TFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQASDLSLIDKESDDV 524
Query: 256 AVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE 315
+E++ D + S +L GHS V + S + +++ S+D +VRLW +
Sbjct: 525 -----LERIM--DEKTASELKILYGHSGPVY---GASFSPDRNYLLSSSEDGTVRLWSLQ 574
Query: 316 SRCCVGVG-TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 374
+ C+ VG GH V FS + VSG D ++W+ D QP+
Sbjct: 575 TFTCL-VGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHY-----QPLR----- 622
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 434
+ A H D+N PN + V TGS DRT +W + + V F GHK I S+ FSP
Sbjct: 623 IFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 682
Query: 435 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW-T 492
+ + T + D + +W I G + +GHT +V F +R +I++ G+ D V+LW
Sbjct: 683 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF-SRDGEILASGSMDNTVRLWDA 741
Query: 493 VRTGECIATYD 503
V+ E + T D
Sbjct: 742 VKAFEDLETDD 752
Score = 246 (91.7 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 60/235 (25%), Positives = 100/235 (42%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
LI S D R+ D ++ + + GH G V +FS +N+L+S S D T+++WS
Sbjct: 516 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQ 574
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+ H + +P +G DR A +W + F
Sbjct: 575 TFT----------CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 624
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH + + P V T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 625 AGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 684
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ + DG V LW + G + H D + +L + E+ A+G D V LW
Sbjct: 685 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
Score = 220 (82.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 52/201 (25%), Positives = 93/201 (46%)
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDA-EQPMNLKAKA---VVAAHGKDINSLAVAPND 392
KKL++ V +SD ++ D SDD E+ M+ K + ++ H + + +P+
Sbjct: 503 KKLRS--VKQASDLSL----IDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDR 556
Query: 393 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
+ + + S+D T +W L +V ++GH +W +FSP ++ D+ ++W+
Sbjct: 557 NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD 616
Query: 453 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
L+ F GH + V + + + AD V+LW V G C+ + H+ I +L
Sbjct: 617 HYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 676
Query: 513 AVGKKTEMFATGGSDALVNLW 533
ATG +D V LW
Sbjct: 677 TFSPNGRFLATGATDGRVLLW 697
Score = 169 (64.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 37/95 (38%), Positives = 47/95 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
ADR V +WDV G C F GHKG + S+ F P+ L +G+ D V +WD+ V
Sbjct: 648 ADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWDIGHGLMV 705
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H V S+ + DG L S D V LWD
Sbjct: 706 GELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 134 (52.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 31/97 (31%), Positives = 47/97 (48%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G DR +W D F GH V+ +HP+++ + +GS D TVR+WD+L C
Sbjct: 605 GHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSN--YVATGSADRTVRLWDVLNGNC 662
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
V H + S+ + +G L + D V LWD+
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Score = 61 (26.5 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKK 65
D SL+ G D+TVRVW + KK
Sbjct: 482 DSSLIAGGFADSTVRVWSVTPKK 504
Score = 60 (26.2 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 41 DTDKSLLFSGSDDATVRVW---DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDK 96
D+DK + T RV D L C T + +T++ +T D S+LI+ G D
Sbjct: 435 DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDD-SSLIAGGFADS 493
Query: 97 VVNLWDL 103
V +W +
Sbjct: 494 TVRVWSV 500
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 200 (75.5 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 60/245 (24%), Positives = 113/245 (46%)
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
TC G+ LI +GS+D +V++W ++ TGH + +A + +D
Sbjct: 241 TCLRWGGEGLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALN-----------TD 289
Query: 350 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
+ ++ F+ S +P ++ VA + +L +A + LV +GS D T +W
Sbjct: 290 YALRTSCFEP-SKRCIKPDTVEECQKVAQTRYEA-ALEIAGGERLV-SGSDDFTLFMWNP 346
Query: 410 PDLV-SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 468
+ S+ GH + + V FSP + + +AS DK++K+W G L + GH V
Sbjct: 347 KETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVY 406
Query: 469 RASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 528
+ ++ +VS AD +K++ ++T H D+++ + + +GG D
Sbjct: 407 QVAWSADSRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDK 466
Query: 529 LVNLW 533
++ LW
Sbjct: 467 VLKLW 471
Score = 168 (64.2 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 56/240 (23%), Positives = 106/240 (44%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L+ + KD ++ +WD+ V +GH +V + + + + SGS D T+K+W
Sbjct: 209 LLASCGKDGNIFIWDTVQGTVVRCLSGHTASVTCLRWGG--EGLIYSGSQDRTVKMWR-- 264
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+DD N+ H IN+LA+ + +L + + C+ PD V
Sbjct: 265 --ADDGVMCRNM------TGHAHWINTLALNTDYALRTSCFEPSKRCI--KPDTVEECQK 314
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-CLKTFEGHTSSVLRASFLTRGA 477
R ++E + +++V + S D T+ +W+ + + GH V + F
Sbjct: 315 VAQTRYEAALEIAGGERLV-SGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTR 373
Query: 478 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
I S D VKLW RTG+ +A+ H ++ +A + + +G +D+ + ++ T
Sbjct: 374 YIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFELKT 433
Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 37/169 (21%), Positives = 73/169 (43%)
Query: 371 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 430
+ A + HG+ + S +P+ + +GS D+T +W + + + T + HK + + +
Sbjct: 96 RCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAW 155
Query: 431 SPVDQVVITASGDKTIKIWSISDGSCL-KTFEGHTSSVLRASFLTRGAQ-----IVSCGA 484
SP + +A + I IW+ G + KT + H + ++ + SCG
Sbjct: 156 SPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGK 215
Query: 485 DGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
DG + +W G + H + L G + +++ G D V +W
Sbjct: 216 DGNIFIWDTVQGTVVRCLSGHTASVTCLRWGGEGLIYS-GSQDRTVKMW 263
Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 49/205 (23%), Positives = 87/205 (42%)
Query: 316 SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAV 375
+RC + GH V + FS + L SGS D T+++W + E P++
Sbjct: 95 TRCSASI-PGHGEPVISAQFSPDGRG-LASGSGDQTMRIWDIE-----LELPLH-----T 142
Query: 376 VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV-VTFRGHKRGIWSVEFSPVD 434
+H + +A +P+ + + + ++ C+W + T + HK+ I S+ + P+
Sbjct: 143 CKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMH 202
Query: 435 Q-----VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
+ ++ + D I IW G+ ++ GHT+SV + G I S D VK
Sbjct: 203 KDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTASVTCLRWGGEGL-IYSGSQDRTVK 261
Query: 490 LWTVRTGECIATYDKHEDKIWALAV 514
+W G H I LA+
Sbjct: 262 MWRADDGVMCRNMTGHAHWINTLAL 286
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 30/93 (32%), Positives = 49/93 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +W G +GH G V + + D LL SGS D+T++V++L K
Sbjct: 381 DKSVKLWCGRTGKYLASLRGHVGPVYQVAW--SADSRLLVSGSADSTLKVFELKTKSLYY 438
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
L H V ++ + +G+ ++S G+DKV+ LW
Sbjct: 439 DLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
Score = 115 (45.5 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
+ GH ++V + S I + S D SV+LW + + GH+G V VA+S
Sbjct: 356 MTGHMQLV---NQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSA 412
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 397
LVSGS+D T+KV+ S + P HG ++ ++ +P + V +
Sbjct: 413 D-SRLLVSGSADSTLKVFELKTKSLYYDLP----------GHGDEVFTVDWSPEGTKVVS 461
Query: 398 GSQDRTACVWR 408
G +D+ +WR
Sbjct: 462 GGKDKVLKLWR 472
Score = 101 (40.6 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
C+ GH V S F PD + L SGS D T+R+WD+ + + T H S V +A
Sbjct: 97 CSASIPGHGEPVISAQFSPD-GRGLA-SGSGDQTMRIWDIELELPLHTCKSHKSWVLCIA 154
Query: 82 ITSDGSTLISAGRDKVVNLWDLR 104
+ D + + SA ++ + +W+ +
Sbjct: 155 WSPDATKIASACKNGEICIWNAK 177
Score = 98 (39.6 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D+ + +WD++ H K HK V I + PD K + S + + +W+
Sbjct: 120 LASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATK--IASACKNGEICIWNAK 177
Query: 63 AKKCVA-TLDKHFSRVTSMA---ITSDGST--LISAGRDKVVNLWD 102
+ + TL +H +TS+A + D + L S G+D + +WD
Sbjct: 178 TGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWD 223
Score = 89 (36.4 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 25/99 (25%), Positives = 43/99 (43%)
Query: 11 KVLVWDVDGGF-CTHYFKGHKGVVSSILFHP---DTDKSLLFSGSDDATVRVWDLLAKKC 66
++ +W+ G K HK ++S+ + P D LL S D + +WD +
Sbjct: 170 EICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTV 229
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
V L H + VT + +G + S +D+ V +W D
Sbjct: 230 VRCLSGHTASVTCLRWGGEG-LIYSGSQDRTVKMWRADD 267
Score = 84 (34.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D + +WD G GH V+ + + + L++SGS D TV++W
Sbjct: 214 GKDGNIFIWDTVQGTVVRCLSGHTASVTCLRWGGE---GLIYSGSQDRTVKMWRADDGVM 270
Query: 67 VATLDKHFSRVTSMAITSD 85
+ H + ++A+ +D
Sbjct: 271 CRNMTGHAHWINTLALNTD 289
Score = 68 (29.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
++V++L + S Y L GH + V +D S +V+G KD ++LW
Sbjct: 426 LKVFELKTKSLYYDLPGHGDEVFTVDW---SPEGTKVVSGGKDKVLKLW 471
Score = 64 (27.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+C A++ H V S + DG L S D+ + +WD+
Sbjct: 96 RCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDI 134
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 248 (92.4 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 77/250 (30%), Positives = 118/250 (47%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
V++ D S + L GH+ V CA + L+++ S+D+++RLW + CV
Sbjct: 432 VRMLDDRSGEVTRSLMGHTGPVY---RCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTY 488
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
GH+ V V F+ F VS S D T ++W+ D N +A V H D+
Sbjct: 489 RGHVYPVWDVRFAPHGYYF-VSCSYDKTARLWATDS---------N-QALRVFVGHLSDV 537
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
+ + PN + V TGS DRT +W SV GHK + S+ FS + + + S D
Sbjct: 538 DCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVD 597
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR--TGECIA- 500
I IW +S+GS + T HTS+V +F G + + G D + LW T + I+
Sbjct: 598 HNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTEDYISN 657
Query: 501 --TYDKHEDK 508
T H+D+
Sbjct: 658 HITVSHHQDE 667
Score = 222 (83.2 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 59/230 (25%), Positives = 96/230 (41%)
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 363
S D +VR+ D S GH G V AF+ ++ N L+S S D TI++WS
Sbjct: 427 SADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEM-NLLLSCSEDSTIRLWSL------ 479
Query: 364 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKR 423
+ H + + AP+ + S D+TA +W ++ F GH
Sbjct: 480 ----LTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLS 535
Query: 424 GIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCG 483
+ V+F P V T S D+T+++W G ++ GH SV +F G + S
Sbjct: 536 DVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGS 595
Query: 484 ADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
D + +W + G + T +H + + + + A G D + LW
Sbjct: 596 VDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLW 645
Score = 175 (66.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 42/148 (28%), Positives = 64/148 (43%)
Query: 392 DSLVCTGSQDRTACVWRLPDLVSVVT--FRGHKRGIWSVEFSPVDQVVITASGDKTIKIW 449
DSL + V L D VT GH ++ F+P ++++ S D TI++W
Sbjct: 418 DSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLW 477
Query: 450 SISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI 509
S+ SC+ T+ GH V F G VSC D +LW + + + + H +
Sbjct: 478 SLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDV 537
Query: 510 WALAVGKKTEMFATGGSDALVNLWHDST 537
+ + ATG SD V LW + T
Sbjct: 538 DCVQFHPNSNYVATGSSDRTVRLWDNMT 565
Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 43/114 (37%), Positives = 58/114 (50%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
+DR V +WD G GHKG VSS+ F L SGS D + +WDL V
Sbjct: 554 SDRTVRLWDNMTGQSVRLMTGHKGSVSSLAF--SACGRYLASGSVDHNIIIWDLSNGSLV 611
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR----DY-SCKLTVPTYE 116
TL +H S VT++ + DG+ L +AG D + LWD DY S +TV ++
Sbjct: 612 TTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTEDYISNHITVSHHQ 665
Score = 159 (61.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 52/194 (26%), Positives = 90/194 (46%)
Query: 166 NADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEK 225
+ADS +++S+D+ + +DD T + + + C A + LL + E
Sbjct: 416 DADSLRELDKESADINVRM-LDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTI 474
Query: 226 KMELILSKRLV----GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGH 281
++ +L+ V G+ + D++F Y + + +++ S V GH
Sbjct: 475 RLWSLLTWSCVVTYRGHVYPVWDVRF-APHGYYFVSCSYDKTARLWATDSNQALRVFVGH 533
Query: 282 SEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN 341
V C+ S+ + TGS D +VRLWD+ + V + TGH G+V ++AFS
Sbjct: 534 LSDVDCVQFHPNSN---YVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSA-CGR 589
Query: 342 FLVSGSSDHTIKVW 355
+L SGS DH I +W
Sbjct: 590 YLASGSVDHNIIIW 603
Score = 151 (58.2 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 57/205 (27%), Positives = 80/205 (39%)
Query: 6 EGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 65
E AD V + D G T GH G V F P+ + LL S S+D+T+R+W LL
Sbjct: 426 ESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMN--LLLSCSEDSTIRLWSLLTWS 483
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-I 124
CV T H V + G +S DK LW D + L V + + C
Sbjct: 484 CVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLW-ATDSNQALRVFVGHLSDVDCVQF 542
Query: 125 PPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF 184
P S + + SS + + +T G +G V A SAC S V +
Sbjct: 543 HPNSNYVATGSSDRTVRLWDNMTGQSVRLMT-GHKGSVSSL-AFSACGRYLASGSVDHNI 600
Query: 185 EMDDSKRGFTAATVLPSNQGLLCVT 209
+ D G T+L + +T
Sbjct: 601 IIWDLSNGSLVTTLLRHTSTVTTIT 625
Score = 57 (25.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 239 NEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA-LSSGK 297
++++L LK L E + LA++ + L S VL H + TCA +S
Sbjct: 342 SDKLLKLKALREASKRLALSKD-------QLPSAVFYTVLNSHQGV-----TCAEISDDS 389
Query: 298 ILIVTGSKDNSVRLW 312
++ G D+SVR+W
Sbjct: 390 TMLACGFGDSSVRIW 404
Score = 56 (24.8 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 3 ALLEGADRKVLVWDV--DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
AL E + R L D F T H+GV + + D ++L G D++VR+W
Sbjct: 350 ALREASKRLALSKDQLPSAVFYT-VLNSHQGVTCAEI---SDDSTMLACGFGDSSVRIWS 405
Query: 61 LLAKK 65
L K
Sbjct: 406 LTPAK 410
Score = 53 (23.7 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 41 DTDKSLLFSGSDDATVRVW---DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDK 96
D+DK L +A+ R+ D L T+ VT I SD ST+++ G D
Sbjct: 341 DSDKLLKLKALREASKRLALSKDQLPSAVFYTVLNSHQGVTCAEI-SDDSTMLACGFGDS 399
Query: 97 VVNLWDL 103
V +W L
Sbjct: 400 SVRIWSL 406
Score = 37 (18.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 18/66 (27%), Positives = 27/66 (40%)
Query: 295 SGKILIVTGSKDNSVRLWDSE----SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
S K+L + ++ S RL S+ S V H G V S L G D
Sbjct: 342 SDKLLKLKALREASKRLALSKDQLPSAVFYTVLNSHQG-VTCAEISDD-STMLACGFGDS 399
Query: 351 TIKVWS 356
++++WS
Sbjct: 400 SVRIWS 405
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 183 (69.5 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 43/126 (34%), Positives = 57/126 (45%)
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
T +W + T GH + SV P +++AS DKTIK+W + G C+KTF G
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI----WALAVGKKT 518
H V G I SC D V++W V T EC A +HE + WA +
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 121
Query: 519 EMFATG 524
ATG
Sbjct: 122 ISEATG 127
Score = 151 (58.2 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 12 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 71
+ +WD G C GH VSS+ P+ D + S S D T+++W++ CV T
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCVKTFT 60
Query: 72 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFD 131
H V + DG+ + S D+ V +W + CK + +E V + P S++
Sbjct: 61 GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYS 120
Query: 132 S 132
S
Sbjct: 121 S 121
Score = 151 (58.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 26/89 (29%), Positives = 45/89 (50%)
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
TIK+W C++T GH +V + + G IVS D +K+W V+TG C+ T+
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLW 533
H + + + + + A+ +D V +W
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVW 90
Score = 131 (51.2 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 28/113 (24%), Positives = 55/113 (48%)
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
TIK+W F G + + M+ H +++S+A+ PN + + S+D+T +W +
Sbjct: 2 TIKLWDFQGF--ECIRTMH--------GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 51
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGH 463
V TF GH+ + V + ++ + S D+T+++W ++ C H
Sbjct: 52 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH 104
Score = 129 (50.5 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + +W+V G+C F GH+ V + P+ D +L+ S S+D TVRVW + K+C A
Sbjct: 42 DKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKA 99
Query: 69 TLDKH 73
L +H
Sbjct: 100 ELREH 104
Score = 127 (49.8 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 55 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT 114
T+++WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C T
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 115 YEMVEAVCAIPPGSAFDSFLSSYNQQTIK 143
+ E V + P S N QT++
Sbjct: 62 HR--EWVRMVRPNQDGTLIASCSNDQTVR 88
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH V +LFH + + S +DD T+RVWD K+C+ TL+ H VTS+
Sbjct: 131 GHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP 188
Query: 88 TLISAGRDKVVNLWDLR 104
+++ D+ V +W+ R
Sbjct: 189 YVVTGSVDQTVKVWECR 205
Score = 109 (43.4 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 36/148 (24%), Positives = 61/148 (41%)
Query: 388 VAPND--SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 445
V PN +L+ + S D+T VW + R H+ + + ++P
Sbjct: 69 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYS-------- 120
Query: 446 IKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKH 505
SIS+ + + GH + V F + G I+SC D +++W + C+ T + H
Sbjct: 121 ----SISEATGSEV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 174
Query: 506 EDKIWALAVGKKTEMFATGGSDALVNLW 533
E + +L K TG D V +W
Sbjct: 175 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 202
Score = 106 (42.4 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQI 479
GH + V F + +++ + DKT+++W + C+KT H V F +
Sbjct: 131 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 190
Query: 480 VSCGADGLVKLWTVR 494
V+ D VK+W R
Sbjct: 191 VTGSVDQTVKVWECR 205
Score = 105 (42.0 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 24/92 (26%), Positives = 46/92 (50%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++++D C + GH V + A+ IV+ S+D ++++W+ ++ CV
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNV---SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 59
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
TGH V V ++ + S S+D T++VW
Sbjct: 60 TGHREWVRMVRPNQD-GTLIASCSNDQTVRVW 90
Score = 96 (38.9 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
S GK I++ + D ++R+WD +++ C+ H V ++ F K ++V+GS D T+K
Sbjct: 143 SGGKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP-YVVTGSVDQTVK 200
Query: 354 VW 355
VW
Sbjct: 201 VW 202
Score = 86 (35.3 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 28/125 (22%), Positives = 54/125 (43%)
Query: 308 SVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 367
+++LWD + C+ GH V +VA + +VS S D TIK+W + +
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GDHIVSASRDKTIKMW-------EVQTG 53
Query: 368 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWS 427
+K H + + + + +L+ + S D+T VW + R H+ +
Sbjct: 54 YCVKT---FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 110
Query: 428 VEFSP 432
+ ++P
Sbjct: 111 ISWAP 115
Score = 82 (33.9 bits), Expect = 9.9e-16, Sum P(2) = 9.9e-16
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 438
H + + + + + D+T VW + + T H+ + S++F V+
Sbjct: 132 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 191
Query: 439 TASGDKTIKIW 449
T S D+T+K+W
Sbjct: 192 TGSVDQTVKVW 202
Score = 72 (30.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 25/87 (28%), Positives = 35/87 (40%)
Query: 321 GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG 380
G GH V V F F++S + D T++VW + N + + AH
Sbjct: 127 GSEVGHDNWVRGVLFHSG-GKFILSCADDKTLRVWDYK----------NKRCMKTLNAHE 175
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVW 407
+ SL V TGS D+T VW
Sbjct: 176 HFVTSLDFHKTAPYVVTGSVDQTVKVW 202
Score = 55 (24.4 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 17/100 (17%), Positives = 45/100 (45%)
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 296
G++ + + + + ++ A+ + ++++++ + C GH E V + +
Sbjct: 19 GHDHNVSSVAIMPNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP---NQD 74
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
LI + S D +VR+W ++ C H V ++++
Sbjct: 75 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 114
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 251 (93.4 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 71/303 (23%), Positives = 139/303 (45%)
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L + G+ + I F +Q LA + + + +++L+ + ++ GH++++ ++
Sbjct: 10 LERHFKGHKDVISCADFNPNNKQ-LATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNF 68
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
SG L+ + S+D +VRLW + V H +V +V FS+ Q LV+ S D
Sbjct: 69 AP--SGS-LVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQR-LVTASDDK 124
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
++KVW E+ L + + H + +P+ L+ + DRT +W
Sbjct: 125 SVKVWG-------VERKKFLYS---LNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTS 174
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
+ F + V+F+ + ++ D TIKIW I ++ ++ H + V
Sbjct: 175 SHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCF 234
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 530
SF G ++S +D +K+ + G I T H+ + + + ++FA+GG+D+ V
Sbjct: 235 SFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQV 294
Query: 531 NLW 533
+W
Sbjct: 295 LMW 297
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 46/158 (29%), Positives = 77/158 (48%)
Query: 381 KDINSLA-VAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVIT 439
KD+ S A PN+ + TGS D++ +W L F GH I V F+P +V +
Sbjct: 18 KDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVAS 77
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
+S D+T+++W+ S F+ HT+SV F G ++V+ D VK+W V + +
Sbjct: 78 SSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFL 137
Query: 500 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ ++H + + + A+ G D V LW S+
Sbjct: 138 YSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSS 175
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
GAD + +WD+ ++K H V+ FHP + L SGS D+T+++ DLL +
Sbjct: 205 GADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGN--YLISGSSDSTIKILDLLEGRL 262
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 126
+ TL H V ++ + DG S G D V +W S + + V PP
Sbjct: 263 IYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTNFDSLNYRELLSKHSKRVTPDPP 322
Query: 127 GSAFDSFLSSYNQ 139
D + S+++
Sbjct: 323 PHLMDIYPRSHHR 335
Score = 141 (54.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 9 DRKVLVWDVD-GGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
D+ V +W G T FK H V S+ F D + L + SDD +V+VW + KK +
Sbjct: 81 DQTVRLWTPSIKGEST-VFKAHTASVRSVHFSRDGQR--LVTASDDKSVKVWGVERKKFL 137
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+L++H + V + DG + S G D+ V LWD + C
Sbjct: 138 YSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQC 178
Score = 134 (52.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V VW V+ + H V F PD L+ S DD TVR+WD + +C+
Sbjct: 123 DKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDG--RLIASCGDDRTVRLWDTSSHQCIN 180
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+ T + S G+ + S+G D + +WD+R
Sbjct: 181 IFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIR 216
Score = 125 (49.1 bits), Expect = 0.00023, P = 0.00023
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ +++W++ F GH V++ + F P SL+ S S D TVR+W K
Sbjct: 39 DKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSG--SLVASSSRDQTVRLWTPSIKGEST 96
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
H + V S+ + DG L++A DK V +W
Sbjct: 97 VFKAHTASVRSVHFSRDGQRLVTASDDKSVKVW 129
Score = 120 (47.3 bits), Expect = 0.00080, P = 0.00080
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 25 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 84
+FKGHK V+S F+P+ + L +GS D ++ +W+L K H +T +
Sbjct: 13 HFKGHKDVISCADFNPNNKQ--LATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAP 70
Query: 85 DGSTLISAGRDKVVNLW 101
GS + S+ RD+ V LW
Sbjct: 71 SGSLVASSSRDQTVRLW 87
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 251 (93.4 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 71/244 (29%), Positives = 119/244 (48%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+IVTGS D++VR+WD + + H AV + FS L +V+ S D +I VW
Sbjct: 243 VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL---MVTCSKDRSIAVWDMA 299
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+D + + V+ H +N V +D + + S DRT VW V T
Sbjct: 300 SATD-------ITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 350
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 351 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 406
Query: 479 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 407 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 465
Query: 530 VNLW 533
+ +W
Sbjct: 466 L-IW 468
Score = 188 (71.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 73/286 (25%), Positives = 125/286 (43%)
Query: 131 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 189
D +S +IK + SLE + G G V D + SSD T+ + D
Sbjct: 202 DKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 258
Query: 190 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 243
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 259 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 318
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 301
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 319 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 368
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 369 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 425
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D L + +V G+ + L ++ + + S D T +W
Sbjct: 426 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW 468
Score = 164 (62.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 50/194 (25%), Positives = 92/194 (47%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
++SG D++IK+W D + +L+ V+ H + L + ++ ++ TGS D
Sbjct: 204 IISGLRDNSIKIW------DKS----SLECLKVLTGHTGSV--LCLQYDERVIVTGSSDS 251
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW---SISDGSCLKT 459
T VW + + T H + + FS + +++T S D++I +W S +D + +
Sbjct: 252 TVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRV 309
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 310 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 365
Query: 520 MFATGGSDALVNLW 533
+ +G SD + LW
Sbjct: 366 LVVSGSSDNTIRLW 379
Score = 139 (54.0 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 200 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 257
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F + G +V+C D + +W + + I H
Sbjct: 258 VNTGEVLNTLIHHNEAVLHLRF-SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 315
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W ST
Sbjct: 316 AVNVVDFDDKYIVSASG--DRTIKVWSTST 343
Score = 131 (51.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 210 DNSIKIWDKSSLECLKVLTGHTGSVLCLQY----DERVIVTGSSDSTVRVWDVNTGEVLN 265
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + S+G +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 266 TLIHHNEAVLHLRF-SNG-LMVTCSKDRSIAVWDMAS-ATDITLRRV-LVGHRAAVNVVD 321
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 322 FDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 376
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 377 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 408
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00029
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL A
Sbjct: 372 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDP 427
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL +H RV + D +IS+ D + +WD
Sbjct: 428 RAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 469
Score = 120 (47.3 bits), Expect = 0.00080, P = 0.00080
Identities = 66/306 (21%), Positives = 131/306 (42%)
Query: 85 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 138
D +IS RD + +WD C L V T +C I GS+ DS + ++
Sbjct: 200 DDDKIISGLRDNSIKIWDKSSLEC-LKVLTGHTGSVLCLQYDERVIVTGSS-DSTVRVWD 257
Query: 139 QQT-------IKKKRRSLEIHFITVGERGIVRMWNAD-SACLYEQKSS-DVTISFEMDDS 189
T I L + F G++ + D S +++ S+ D+T+ +
Sbjct: 258 VNTGEVLNTLIHHNEAVLHLRF----SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 313
Query: 190 KRGFTAATVLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFL 248
+ A V+ ++ ++ + D+ + +++T E + + L G+ I L++
Sbjct: 314 R---AAVNVVDFDDKYIVSASGDRTIKVWST-----STCEFV--RTLNGHKRGIACLQY- 362
Query: 249 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
++ + ++ ++++D+ +C VL GH E+V C+ + +I V+G+ D
Sbjct: 363 --RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RFDNKRI--VSGAYDGK 415
Query: 309 VRLWDSE---------SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+++WD + S C+ H G V + F + Q ++S S D TI +W F
Sbjct: 416 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQ--IISSSHDDTILIWDFLN 472
Query: 360 LSDDAE 365
+ A+
Sbjct: 473 VPPSAQ 478
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 251 (93.4 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 71/244 (29%), Positives = 119/244 (48%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+IVTGS D++VR+WD + + H AV + FS L +V+ S D +I VW
Sbjct: 260 VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL---MVTCSKDRSIAVWDMA 316
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+D + + V+ H +N V +D + + S DRT VW V T
Sbjct: 317 SATD-------ITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 367
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 368 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 423
Query: 479 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 424 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 482
Query: 530 VNLW 533
+ +W
Sbjct: 483 L-IW 485
Score = 184 (69.8 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 72/286 (25%), Positives = 125/286 (43%)
Query: 131 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 189
+ +S +IK + SLE + G G V D + SSD T+ + D
Sbjct: 219 EKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 275
Query: 190 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 243
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 276 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 335
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 301
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 336 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 385
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 386 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 442
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D L + +V G+ + L ++ + + S D T +W
Sbjct: 443 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW 485
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 51/194 (26%), Positives = 91/194 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
++SG D++IK+W D S L+ V+ H + L + ++ ++ TGS D
Sbjct: 221 IISGLRDNSIKIW--DKTS--------LECLKVLTGHTGSV--LCLQYDERVIVTGSSDS 268
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW---SISDGSCLKT 459
T VW + + T H + + FS + +++T S D++I +W S +D + +
Sbjct: 269 TVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRV 326
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 327 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 382
Query: 520 MFATGGSDALVNLW 533
+ +G SD + LW
Sbjct: 383 LVVSGSSDNTIRLW 396
Score = 139 (54.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 274
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F + G +V+C D + +W + + I H
Sbjct: 275 VNTGEVLNTLIHHNEAVLHLRF-SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 332
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W ST
Sbjct: 333 AVNVVDFDDKYIVSASG--DRTIKVWSTST 360
Score = 130 (50.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 227 DNSIKIWDKTSLECLKVLTGHTGSVLCLQY----DERVIVTGSSDSTVRVWDVNTGEVLN 282
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + S+G +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 283 TLIHHNEAVLHLRF-SNG-LMVTCSKDRSIAVWDMAS-ATDITLRRV-LVGHRAAVNVVD 338
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 339 FDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 393
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 394 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 425
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL A
Sbjct: 389 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDP 444
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL +H RV + D +IS+ D + +WD
Sbjct: 445 RAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 486
Score = 120 (47.3 bits), Expect = 0.00084, P = 0.00084
Identities = 66/306 (21%), Positives = 131/306 (42%)
Query: 85 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 138
D +IS RD + +WD C L V T +C I GS+ DS + ++
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLEC-LKVLTGHTGSVLCLQYDERVIVTGSS-DSTVRVWD 274
Query: 139 QQT-------IKKKRRSLEIHFITVGERGIVRMWNAD-SACLYEQKSS-DVTISFEMDDS 189
T I L + F G++ + D S +++ S+ D+T+ +
Sbjct: 275 VNTGEVLNTLIHHNEAVLHLRF----SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 330
Query: 190 KRGFTAATVLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFL 248
+ A V+ ++ ++ + D+ + +++T E + + L G+ I L++
Sbjct: 331 R---AAVNVVDFDDKYIVSASGDRTIKVWST-----STCEFV--RTLNGHKRGIACLQY- 379
Query: 249 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
++ + ++ ++++D+ +C VL GH E+V C+ + +I V+G+ D
Sbjct: 380 --RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RFDNKRI--VSGAYDGK 432
Query: 309 VRLWDSE---------SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+++WD + S C+ H G V + F + Q ++S S D TI +W F
Sbjct: 433 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQ--IISSSHDDTILIWDFLN 489
Query: 360 LSDDAE 365
+ A+
Sbjct: 490 VPPSAQ 495
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 251 (93.4 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 71/244 (29%), Positives = 119/244 (48%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+IVTGS D++VR+WD + + H AV + FS L +V+ S D +I VW
Sbjct: 260 VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL---MVTCSKDRSIAVWDMA 316
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+D + + V+ H +N V +D + + S DRT VW V T
Sbjct: 317 SATD-------ITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 367
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 368 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 423
Query: 479 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 424 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 482
Query: 530 VNLW 533
+ +W
Sbjct: 483 L-IW 485
Score = 184 (69.8 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 72/286 (25%), Positives = 125/286 (43%)
Query: 131 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 189
+ +S +IK + SLE + G G V D + SSD T+ + D
Sbjct: 219 EKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 275
Query: 190 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 243
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 276 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 335
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 301
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 336 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 385
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 386 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 442
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D L + +V G+ + L ++ + + S D T +W
Sbjct: 443 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW 485
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 51/194 (26%), Positives = 91/194 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
++SG D++IK+W D S L+ V+ H + L + ++ ++ TGS D
Sbjct: 221 IISGLRDNSIKIW--DKTS--------LECLKVLTGHTGSV--LCLQYDERVIVTGSSDS 268
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW---SISDGSCLKT 459
T VW + + T H + + FS + +++T S D++I +W S +D + +
Sbjct: 269 TVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRV 326
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 327 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 382
Query: 520 MFATGGSDALVNLW 533
+ +G SD + LW
Sbjct: 383 LVVSGSSDNTIRLW 396
Score = 139 (54.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 274
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F + G +V+C D + +W + + I H
Sbjct: 275 VNTGEVLNTLIHHNEAVLHLRF-SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 332
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W ST
Sbjct: 333 AVNVVDFDDKYIVSASG--DRTIKVWSTST 360
Score = 130 (50.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 227 DNSIKIWDKTSLECLKVLTGHTGSVLCLQY----DERVIVTGSSDSTVRVWDVNTGEVLN 282
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + S+G +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 283 TLIHHNEAVLHLRF-SNG-LMVTCSKDRSIAVWDMAS-ATDITLRRV-LVGHRAAVNVVD 338
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 339 FDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 393
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 394 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 425
Score = 124 (48.7 bits), Expect = 0.00031, P = 0.00031
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL A
Sbjct: 389 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDP 444
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL +H RV + D +IS+ D + +WD
Sbjct: 445 RAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 486
Score = 120 (47.3 bits), Expect = 0.00084, P = 0.00084
Identities = 66/306 (21%), Positives = 131/306 (42%)
Query: 85 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 138
D +IS RD + +WD C L V T +C I GS+ DS + ++
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLEC-LKVLTGHTGSVLCLQYDERVIVTGSS-DSTVRVWD 274
Query: 139 QQT-------IKKKRRSLEIHFITVGERGIVRMWNAD-SACLYEQKSS-DVTISFEMDDS 189
T I L + F G++ + D S +++ S+ D+T+ +
Sbjct: 275 VNTGEVLNTLIHHNEAVLHLRF----SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 330
Query: 190 KRGFTAATVLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFL 248
+ A V+ ++ ++ + D+ + +++T E + + L G+ I L++
Sbjct: 331 R---AAVNVVDFDDKYIVSASGDRTIKVWST-----STCEFV--RTLNGHKRGIACLQY- 379
Query: 249 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
++ + ++ ++++D+ +C VL GH E+V C+ + +I V+G+ D
Sbjct: 380 --RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RFDNKRI--VSGAYDGK 432
Query: 309 VRLWDSE---------SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+++WD + S C+ H G V + F + Q ++S S D TI +W F
Sbjct: 433 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQ--IISSSHDDTILIWDFLN 489
Query: 360 LSDDAE 365
+ A+
Sbjct: 490 VPPSAQ 495
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 258 (95.9 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 66/232 (28%), Positives = 104/232 (44%)
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS +S +L + GH G V +FS Q +L+S S D T ++WS + +S
Sbjct: 654 SGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQ-YLLSCSEDTTARLWSMETMS 712
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGH 421
NL H + ++ +P T S DRTA +W + + F GH
Sbjct: 713 -------NL---VCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGH 762
Query: 422 KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVS 481
+V F P + T S DK+ ++W I G C++ F GH + + +F G + +
Sbjct: 763 LSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLAT 822
Query: 482 CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
G D V LW + TG+ + D H +++L + A+G SD V LW
Sbjct: 823 AGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLW 874
Score = 249 (92.7 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 63/215 (29%), Positives = 106/215 (49%)
Query: 280 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL 339
GHS V C+ S +++ S+D + RLW E+ + GH V V+FS
Sbjct: 677 GHSGPVY---GCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSP-F 732
Query: 340 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGS 399
+ + S D T ++W+ + +S P+ + H D N++ PN + + TGS
Sbjct: 733 GFYFATASHDRTARLWTTNHIS-----PLR-----IFTGHLSDCNTVRFHPNINYLATGS 782
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
D++A +W + V F GH+ I++V FSP +++ TA D ++ +W +S G +K
Sbjct: 783 NDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKK 842
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
+GHT V F G+ + S +D V+LW V+
Sbjct: 843 MDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVK 877
Score = 228 (85.3 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 46/159 (28%), Positives = 78/159 (49%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 438
H + + +P+ + + S+D TA +W + + ++V ++GH +W V FSP
Sbjct: 678 HSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFA 737
Query: 439 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 498
TAS D+T ++W+ + S L+ F GH S F + + D +LW ++TG+C
Sbjct: 738 TASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKC 797
Query: 499 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + H I+ +A + AT G D V LW ST
Sbjct: 798 VRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLST 836
Score = 165 (63.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 33/96 (34%), Positives = 50/96 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ +W++ G C F GH+ + ++ F PD LL + +D +V +WDL K V
Sbjct: 784 DKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDG--RLLATAGEDTSVILWDLSTGKKVK 841
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+D H V S+ + DGS L S D V LWD++
Sbjct: 842 KMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVK 877
Score = 145 (56.1 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W + F GH +++ FHP+ + L +GS+D + R+W++ KCV
Sbjct: 742 DRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNIN--YLATGSNDKSARLWEIQTGKCVR 799
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H + + ++A + DG L +AG D V LWDL
Sbjct: 800 IFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDL 834
Score = 140 (54.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 33/121 (27%), Positives = 49/121 (40%)
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 476
TF GH ++ FSP Q +++ S D T ++WS+ S L ++GH V SF G
Sbjct: 674 TFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFG 733
Query: 477 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 536
+ D +LWT + + H + ATG +D LW
Sbjct: 734 FYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQ 793
Query: 537 T 537
T
Sbjct: 794 T 794
Score = 122 (48.0 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 32/102 (31%), Positives = 51/102 (50%)
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
YLA +N + +++++ + C + GH + T A S L+ T +D SV LWD
Sbjct: 777 YLATGSNDKSARLWEIQTGKCVRIFMGHRAPIY---TVAFSPDGRLLATAGEDTSVILWD 833
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
+ V GH V ++ FS + L SGSSD T+++W
Sbjct: 834 LSTGKKVKKMDGHTKCVYSLDFSCD-GSILASGSSDCTVRLW 874
Score = 106 (42.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 34/161 (21%), Positives = 72/161 (44%)
Query: 371 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 430
K + H I ++A +P+ L+ T +D + +W L V GH + ++S++F
Sbjct: 796 KCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDF 855
Query: 431 SPVDQVVITASGDKTIKIWSISDG--SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 488
S ++ + S D T+++W + S L T SS++ +R + +
Sbjct: 856 SCDGSILASGSSDCTVRLWDVKKAFNSSLST---QPSSLINDE--SRKRKTLKS------ 904
Query: 489 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
KL++ E + TY + ++ + ++ + A+G + L
Sbjct: 905 KLFS---DELLETYPTKQTPVYNVCFSRRNLLLASGAFNTL 942
Score = 89 (36.4 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 22/76 (28%), Positives = 32/76 (42%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
F GH G V F PD+ L S S+D T R+W + + H V ++ +
Sbjct: 675 FLGHSGPVYGCSFSPDSQ--YLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPF 732
Query: 86 GSTLISAGRDKVVNLW 101
G +A D+ LW
Sbjct: 733 GFYFATASHDRTARLW 748
Score = 67 (28.6 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 22/101 (21%), Positives = 38/101 (37%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS-GSDDATVRVWDLLAKKCV 67
D +W ++ +KGH V + F P F+ S D T R+W +
Sbjct: 700 DTTARLWSMETMSNLVCYKGHNFPVWDVSFSPF---GFYFATASHDRTARLWTTNHISPL 756
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
H S ++ + + L + DK LW+++ C
Sbjct: 757 RIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKC 797
Score = 48 (22.0 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 288 LDTCALSSGKILIVTGSKDNSVRLWD 313
L+T +S L+ G D+SV++W+
Sbjct: 561 LNTTDISKDAQLVAGGFSDSSVKIWN 586
Score = 46 (21.3 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKK 65
D L+ G D++V++W+L K
Sbjct: 569 DAQLVAGGFSDSSVKIWNLKEMK 591
Score = 44 (20.5 bits), Expect = 9.9e-18, Sum P(2) = 9.9e-18
Identities = 8/40 (20%), Positives = 18/40 (45%)
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
C T+ + + + I+ D + D V +W+L++
Sbjct: 550 CFYTIFNTYQGLNTTDISKDAQLVAGGFSDSSVKIWNLKE 589
Score = 44 (20.5 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 316 SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQ 366
S C + + G + SK Q + G SD ++K+W+ + + Q
Sbjct: 548 SICFYTIFNTYQG-LNTTDISKDAQ-LVAGGFSDSSVKIWNLKEMKEQRLQ 596
Score = 42 (19.8 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 383 INSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
+N+ ++ + LV G D + +W L ++
Sbjct: 561 LNTTDISKDAQLVAGGFSDSSVKIWNLKEM 590
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 241 (89.9 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 64/226 (28%), Positives = 104/226 (46%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
L GHS V +SG +++ S+D++VR WD +S + GH V V S
Sbjct: 350 LRGHSGPVYRTAFLTDASG---LLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSP 406
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 397
+ + S D T ++WSF P+ L A H D++ + PN + + T
Sbjct: 407 -CSLYFSTASHDRTARLWSFA-----RTYPLRL-----YAGHLSDVDCVKFHPNSNYIAT 455
Query: 398 GSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCL 457
GS D+T +W SV F GH+ + ++ FSP + + +A D+ +K+W ++ G
Sbjct: 456 GSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLF 515
Query: 458 KTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
K GHT ++ SF + + S D V++W +R A D
Sbjct: 516 KDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAPTD 561
Score = 236 (88.1 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 57/209 (27%), Positives = 90/209 (43%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH G V AF L+S S D T++ W ++ + H +
Sbjct: 352 GHSGPVYRTAFLTDASG-LLSCSEDSTVRYWDLKSFTNTV----------LYRGHAYPVW 400
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
+ V+P T S DRTA +W + + GH + V+F P + T S DK
Sbjct: 401 DVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDK 460
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
T+++WS G+ ++ F GH VL +F G + S G D +KLW + +G
Sbjct: 461 TVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRG 520
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLW 533
H D I +L+ + + + A+ D V +W
Sbjct: 521 HTDTISSLSFSQDSSLVASASMDNTVRVW 549
Score = 200 (75.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 65/260 (25%), Positives = 117/260 (45%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K L G++ + FL + L+ + + V+ +DL S + + + GH+ V +D
Sbjct: 348 KTLRGHSGPVYRTAFLTDASGLLSCSED-STVRYWDLKSFTNTVLYRGHAYPVWDVDVSP 406
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
S + T S D + RLW + + GH+ V V F N++ +GS+D T+
Sbjct: 407 CS---LYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPN-SNYIATGSTDKTV 462
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
++WS Q +++ + H + +LA +PN + + +D+ +W L
Sbjct: 463 RLWS-------TRQGASVR---LFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASG 512
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD--GS-----C----LKTFE 461
RGH I S+ FS +V +AS D T+++W I + GS C + +
Sbjct: 513 GLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSSELIGQYT 572
Query: 462 GHTSSVLRASFLTRGAQIVS 481
G TS++L F+ +V+
Sbjct: 573 GSTSNILNVQFMACNLLLVT 592
Score = 145 (56.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 29/97 (29%), Positives = 49/97 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +W G F GH+G V ++ F P+ L S +D +++WDL +
Sbjct: 459 DKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNG--KYLASAGEDQRLKLWDLASGGLFK 516
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
L H ++S++ + D S + SA D V +WD+R+
Sbjct: 517 DLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRN 553
Score = 135 (52.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/95 (31%), Positives = 46/95 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR +W + + GH V + FHP+++ + +GS D TVR+W V
Sbjct: 417 DRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSN--YIATGSTDKTVRLWSTRQGASVR 474
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H V ++A + +G L SAG D+ + LWDL
Sbjct: 475 LFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDL 509
Score = 128 (50.1 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 452 SDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWA 511
+ GS +KT GH+ V R +FLT + ++SC D V+ W +++ Y H +W
Sbjct: 342 ASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWD 401
Query: 512 LAVGKKTEMFATGGSDALVNLW 533
+ V + F+T D LW
Sbjct: 402 VDVSPCSLYFSTASHDRTARLW 423
Score = 59 (25.8 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
D LL +G D++ V++W L A+K A H + V+ + + D
Sbjct: 291 DSRLLAAGFDNSAVKLWSLRARKLKA--GPHKADVSKIRLACD 331
Score = 53 (23.7 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 274 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 317
C Y H+E +L +T +S+ L+ G +++V+LW +R
Sbjct: 272 CFYAFQ-HTEQLL--NTAEVSADSRLLAAGFDNSAVKLWSLRAR 312
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 251 (93.4 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 71/244 (29%), Positives = 119/244 (48%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+IVTGS D++VR+WD + + H AV + FS L +V+ S D +I VW
Sbjct: 277 VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL---MVTCSKDRSIAVWDMA 333
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+D + + V+ H +N V +D + + S DRT VW V T
Sbjct: 334 SATD-------ITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 384
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 385 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 440
Query: 479 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 441 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 499
Query: 530 VNLW 533
+ +W
Sbjct: 500 L-IW 502
Score = 188 (71.2 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 73/286 (25%), Positives = 125/286 (43%)
Query: 131 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 189
D +S +IK + SLE + G G V D + SSD T+ + D
Sbjct: 236 DKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 292
Query: 190 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 243
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 293 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 352
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 301
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 353 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 402
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 403 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 459
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D L + +V G+ + L ++ + + S D T +W
Sbjct: 460 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW 502
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 50/194 (25%), Positives = 92/194 (47%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
++SG D++IK+W D + +L+ V+ H + L + ++ ++ TGS D
Sbjct: 238 IISGLRDNSIKIW------DKS----SLECLKVLTGHTGSV--LCLQYDERVIVTGSSDS 285
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW---SISDGSCLKT 459
T VW + + T H + + FS + +++T S D++I +W S +D + +
Sbjct: 286 TVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRV 343
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 344 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 399
Query: 520 MFATGGSDALVNLW 533
+ +G SD + LW
Sbjct: 400 LVVSGSSDNTIRLW 413
Score = 139 (54.0 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 234 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 291
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F + G +V+C D + +W + + I H
Sbjct: 292 VNTGEVLNTLIHHNEAVLHLRF-SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 349
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W ST
Sbjct: 350 AVNVVDFDDKYIVSASG--DRTIKVWSTST 377
Score = 131 (51.2 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 244 DNSIKIWDKSSLECLKVLTGHTGSVLCLQY----DERVIVTGSSDSTVRVWDVNTGEVLN 299
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + S+G +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 300 TLIHHNEAVLHLRF-SNG-LMVTCSKDRSIAVWDMAS-ATDITLRRV-LVGHRAAVNVVD 355
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 356 FDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 410
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 411 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 442
Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL A
Sbjct: 406 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDP 461
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL +H RV + D +IS+ D + +WD
Sbjct: 462 RAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 503
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 66/306 (21%), Positives = 131/306 (42%)
Query: 85 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 138
D +IS RD + +WD C L V T +C I GS+ DS + ++
Sbjct: 234 DDDKIISGLRDNSIKIWDKSSLEC-LKVLTGHTGSVLCLQYDERVIVTGSS-DSTVRVWD 291
Query: 139 QQT-------IKKKRRSLEIHFITVGERGIVRMWNAD-SACLYEQKSS-DVTISFEMDDS 189
T I L + F G++ + D S +++ S+ D+T+ +
Sbjct: 292 VNTGEVLNTLIHHNEAVLHLRF----SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 347
Query: 190 KRGFTAATVLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFL 248
+ A V+ ++ ++ + D+ + +++T E + + L G+ I L++
Sbjct: 348 R---AAVNVVDFDDKYIVSASGDRTIKVWST-----STCEFV--RTLNGHKRGIACLQY- 396
Query: 249 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
++ + ++ ++++D+ +C VL GH E+V C+ + +I V+G+ D
Sbjct: 397 --RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RFDNKRI--VSGAYDGK 449
Query: 309 VRLWDSE---------SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+++WD + S C+ H G V + F + Q ++S S D TI +W F
Sbjct: 450 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQ--IISSSHDDTILIWDFLN 506
Query: 360 LSDDAE 365
+ A+
Sbjct: 507 VPPSAQ 512
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 251 (93.4 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 71/244 (29%), Positives = 119/244 (48%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+IVTGS D++VR+WD + + H AV + FS L +V+ S D +I VW
Sbjct: 279 VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL---MVTCSKDRSIAVWDMA 335
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+D + + V+ H +N V +D + + S DRT VW V T
Sbjct: 336 SATD-------ITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 386
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 387 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 442
Query: 479 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 443 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 501
Query: 530 VNLW 533
+ +W
Sbjct: 502 L-IW 504
Score = 184 (69.8 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 72/286 (25%), Positives = 125/286 (43%)
Query: 131 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 189
+ +S +IK + SLE + G G V D + SSD T+ + D
Sbjct: 238 EKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 294
Query: 190 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 243
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 295 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 354
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 301
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 355 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 404
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 405 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 461
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D L + +V G+ + L ++ + + S D T +W
Sbjct: 462 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW 504
Score = 164 (62.8 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 51/194 (26%), Positives = 91/194 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
++SG D++IK+W D S L+ V+ H + L + ++ ++ TGS D
Sbjct: 240 IISGLRDNSIKIW--DKTS--------LECLKVLTGHTGSV--LCLQYDERVIVTGSSDS 287
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW---SISDGSCLKT 459
T VW + + T H + + FS + +++T S D++I +W S +D + +
Sbjct: 288 TVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRV 345
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 346 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 401
Query: 520 MFATGGSDALVNLW 533
+ +G SD + LW
Sbjct: 402 LVVSGSSDNTIRLW 415
Score = 139 (54.0 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 236 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 293
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F + G +V+C D + +W + + I H
Sbjct: 294 VNTGEVLNTLIHHNEAVLHLRF-SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 351
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W ST
Sbjct: 352 AVNVVDFDDKYIVSASG--DRTIKVWSTST 379
Score = 130 (50.8 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 246 DNSIKIWDKTSLECLKVLTGHTGSVLCLQY----DERVIVTGSSDSTVRVWDVNTGEVLN 301
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + S+G +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 302 TLIHHNEAVLHLRF-SNG-LMVTCSKDRSIAVWDMAS-ATDITLRRV-LVGHRAAVNVVD 357
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 358 FDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 412
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 413 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 444
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL A
Sbjct: 408 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDP 463
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL +H RV + D +IS+ D + +WD
Sbjct: 464 RAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 505
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 66/306 (21%), Positives = 131/306 (42%)
Query: 85 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 138
D +IS RD + +WD C L V T +C I GS+ DS + ++
Sbjct: 236 DDEKIISGLRDNSIKIWDKTSLEC-LKVLTGHTGSVLCLQYDERVIVTGSS-DSTVRVWD 293
Query: 139 QQT-------IKKKRRSLEIHFITVGERGIVRMWNAD-SACLYEQKSS-DVTISFEMDDS 189
T I L + F G++ + D S +++ S+ D+T+ +
Sbjct: 294 VNTGEVLNTLIHHNEAVLHLRF----SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 349
Query: 190 KRGFTAATVLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFL 248
+ A V+ ++ ++ + D+ + +++T E + + L G+ I L++
Sbjct: 350 R---AAVNVVDFDDKYIVSASGDRTIKVWST-----STCEFV--RTLNGHKRGIACLQY- 398
Query: 249 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
++ + ++ ++++D+ +C VL GH E+V C+ + +I V+G+ D
Sbjct: 399 --RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RFDNKRI--VSGAYDGK 451
Query: 309 VRLWDSE---------SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+++WD + S C+ H G V + F + Q ++S S D TI +W F
Sbjct: 452 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQ--IISSSHDDTILIWDFLN 508
Query: 360 LSDDAE 365
+ A+
Sbjct: 509 VPPSAQ 514
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 251 (93.4 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 71/244 (29%), Positives = 119/244 (48%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+IVTGS D++VR+WD + + H AV + FS L +V+ S D +I VW
Sbjct: 280 VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL---MVTCSKDRSIAVWDMA 336
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+D + + V+ H +N V +D + + S DRT VW V T
Sbjct: 337 SATD-------ITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 387
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 388 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 443
Query: 479 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 444 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 502
Query: 530 VNLW 533
+ +W
Sbjct: 503 L-IW 505
Score = 184 (69.8 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 72/286 (25%), Positives = 125/286 (43%)
Query: 131 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 189
+ +S +IK + SLE + G G V D + SSD T+ + D
Sbjct: 239 EKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 295
Query: 190 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 243
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 296 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 355
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 301
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 356 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 405
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 406 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 462
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D L + +V G+ + L ++ + + S D T +W
Sbjct: 463 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW 505
Score = 164 (62.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 51/194 (26%), Positives = 91/194 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
++SG D++IK+W D S L+ V+ H + L + ++ ++ TGS D
Sbjct: 241 IISGLRDNSIKIW--DKTS--------LECLKVLTGHTGSV--LCLQYDERVIVTGSSDS 288
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW---SISDGSCLKT 459
T VW + + T H + + FS + +++T S D++I +W S +D + +
Sbjct: 289 TVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRV 346
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 347 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 402
Query: 520 MFATGGSDALVNLW 533
+ +G SD + LW
Sbjct: 403 LVVSGSSDNTIRLW 416
Score = 139 (54.0 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 237 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 294
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F + G +V+C D + +W + + I H
Sbjct: 295 VNTGEVLNTLIHHNEAVLHLRF-SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 352
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W ST
Sbjct: 353 AVNVVDFDDKYIVSASG--DRTIKVWSTST 380
Score = 130 (50.8 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 247 DNSIKIWDKTSLECLKVLTGHTGSVLCLQY----DERVIVTGSSDSTVRVWDVNTGEVLN 302
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + S+G +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 303 TLIHHNEAVLHLRF-SNG-LMVTCSKDRSIAVWDMAS-ATDITLRRV-LVGHRAAVNVVD 358
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 359 FDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 413
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 414 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 445
Score = 124 (48.7 bits), Expect = 0.00033, P = 0.00033
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL A
Sbjct: 409 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDP 464
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL +H RV + D +IS+ D + +WD
Sbjct: 465 RAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 506
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 66/306 (21%), Positives = 131/306 (42%)
Query: 85 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 138
D +IS RD + +WD C L V T +C I GS+ DS + ++
Sbjct: 237 DDEKIISGLRDNSIKIWDKTSLEC-LKVLTGHTGSVLCLQYDERVIVTGSS-DSTVRVWD 294
Query: 139 QQT-------IKKKRRSLEIHFITVGERGIVRMWNAD-SACLYEQKSS-DVTISFEMDDS 189
T I L + F G++ + D S +++ S+ D+T+ +
Sbjct: 295 VNTGEVLNTLIHHNEAVLHLRF----SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 350
Query: 190 KRGFTAATVLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFL 248
+ A V+ ++ ++ + D+ + +++T E + + L G+ I L++
Sbjct: 351 R---AAVNVVDFDDKYIVSASGDRTIKVWST-----STCEFV--RTLNGHKRGIACLQY- 399
Query: 249 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
++ + ++ ++++D+ +C VL GH E+V C+ + +I V+G+ D
Sbjct: 400 --RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RFDNKRI--VSGAYDGK 452
Query: 309 VRLWDSE---------SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+++WD + S C+ H G V + F + Q ++S S D TI +W F
Sbjct: 453 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQ--IISSSHDDTILIWDFLN 509
Query: 360 LSDDAE 365
+ A+
Sbjct: 510 VPPSAQ 515
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 251 (93.4 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 71/244 (29%), Positives = 119/244 (48%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+IVTGS D++VR+WD + + H AV + FS L +V+ S D +I VW
Sbjct: 292 VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL---MVTCSKDRSIAVWDMA 348
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+D + + V+ H +N V +D + + S DRT VW V T
Sbjct: 349 SATD-------ITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 399
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 400 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 455
Query: 479 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 456 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 514
Query: 530 VNLW 533
+ +W
Sbjct: 515 L-IW 517
Score = 188 (71.2 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 73/286 (25%), Positives = 125/286 (43%)
Query: 131 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 189
D +S +IK + SLE + G G V D + SSD T+ + D
Sbjct: 251 DKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 307
Query: 190 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 243
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 308 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 367
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 301
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 368 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 417
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 418 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 474
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D L + +V G+ + L ++ + + S D T +W
Sbjct: 475 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW 517
Score = 164 (62.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 50/194 (25%), Positives = 92/194 (47%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
++SG D++IK+W D + +L+ V+ H + L + ++ ++ TGS D
Sbjct: 253 IISGLRDNSIKIW------DKS----SLECLKVLTGHTGSV--LCLQYDERVIVTGSSDS 300
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW---SISDGSCLKT 459
T VW + + T H + + FS + +++T S D++I +W S +D + +
Sbjct: 301 TVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRV 358
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 359 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 414
Query: 520 MFATGGSDALVNLW 533
+ +G SD + LW
Sbjct: 415 LVVSGSSDNTIRLW 428
Score = 139 (54.0 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 249 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 306
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F + G +V+C D + +W + + I H
Sbjct: 307 VNTGEVLNTLIHHNEAVLHLRF-SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W ST
Sbjct: 365 AVNVVDFDDKYIVSASG--DRTIKVWSTST 392
Score = 131 (51.2 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 259 DNSIKIWDKSSLECLKVLTGHTGSVLCLQY----DERVIVTGSSDSTVRVWDVNTGEVLN 314
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + S+G +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 315 TLIHHNEAVLHLRF-SNG-LMVTCSKDRSIAVWDMAS-ATDITLRRV-LVGHRAAVNVVD 370
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 371 FDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 425
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 426 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 457
Score = 124 (48.7 bits), Expect = 0.00034, P = 0.00034
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL A
Sbjct: 421 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDP 476
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL +H RV + D +IS+ D + +WD
Sbjct: 477 RAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 518
Score = 120 (47.3 bits), Expect = 0.00092, P = 0.00092
Identities = 66/306 (21%), Positives = 131/306 (42%)
Query: 85 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 138
D +IS RD + +WD C L V T +C I GS+ DS + ++
Sbjct: 249 DDDKIISGLRDNSIKIWDKSSLEC-LKVLTGHTGSVLCLQYDERVIVTGSS-DSTVRVWD 306
Query: 139 QQT-------IKKKRRSLEIHFITVGERGIVRMWNAD-SACLYEQKSS-DVTISFEMDDS 189
T I L + F G++ + D S +++ S+ D+T+ +
Sbjct: 307 VNTGEVLNTLIHHNEAVLHLRF----SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 362
Query: 190 KRGFTAATVLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFL 248
+ A V+ ++ ++ + D+ + +++T E + + L G+ I L++
Sbjct: 363 R---AAVNVVDFDDKYIVSASGDRTIKVWST-----STCEFV--RTLNGHKRGIACLQY- 411
Query: 249 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
++ + ++ ++++D+ +C VL GH E+V C+ + +I V+G+ D
Sbjct: 412 --RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RFDNKRI--VSGAYDGK 464
Query: 309 VRLWDSE---------SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+++WD + S C+ H G V + F + Q ++S S D TI +W F
Sbjct: 465 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQ--IISSSHDDTILIWDFLN 521
Query: 360 LSDDAE 365
+ A+
Sbjct: 522 VPPSAQ 527
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 251 (93.4 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 71/244 (29%), Positives = 119/244 (48%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+IVTGS D++VR+WD + + H AV + FS L +V+ S D +I VW
Sbjct: 292 VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL---MVTCSKDRSIAVWDMA 348
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+D + + V+ H +N V +D + + S DRT VW V T
Sbjct: 349 SATD-------ITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 399
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 400 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 455
Query: 479 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 456 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 514
Query: 530 VNLW 533
+ +W
Sbjct: 515 L-IW 517
Score = 184 (69.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 72/286 (25%), Positives = 125/286 (43%)
Query: 131 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 189
+ +S +IK + SLE + G G V D + SSD T+ + D
Sbjct: 251 EKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 307
Query: 190 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 243
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 308 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 367
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 301
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 368 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 417
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 418 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 474
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D L + +V G+ + L ++ + + S D T +W
Sbjct: 475 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW 517
Score = 164 (62.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 51/194 (26%), Positives = 91/194 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
++SG D++IK+W D S L+ V+ H + L + ++ ++ TGS D
Sbjct: 253 IISGLRDNSIKIW--DKTS--------LECLKVLTGHTGSV--LCLQYDERVIVTGSSDS 300
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW---SISDGSCLKT 459
T VW + + T H + + FS + +++T S D++I +W S +D + +
Sbjct: 301 TVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRV 358
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 359 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 414
Query: 520 MFATGGSDALVNLW 533
+ +G SD + LW
Sbjct: 415 LVVSGSSDNTIRLW 428
Score = 139 (54.0 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 306
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F + G +V+C D + +W + + I H
Sbjct: 307 VNTGEVLNTLIHHNEAVLHLRF-SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W ST
Sbjct: 365 AVNVVDFDDKYIVSASG--DRTIKVWSTST 392
Score = 130 (50.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 259 DNSIKIWDKTSLECLKVLTGHTGSVLCLQY----DERVIVTGSSDSTVRVWDVNTGEVLN 314
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + S+G +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 315 TLIHHNEAVLHLRF-SNG-LMVTCSKDRSIAVWDMAS-ATDITLRRV-LVGHRAAVNVVD 370
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 371 FDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 425
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 426 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 457
Score = 124 (48.7 bits), Expect = 0.00034, P = 0.00034
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL A
Sbjct: 421 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDP 476
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL +H RV + D +IS+ D + +WD
Sbjct: 477 RAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 518
Score = 120 (47.3 bits), Expect = 0.00092, P = 0.00092
Identities = 66/306 (21%), Positives = 131/306 (42%)
Query: 85 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 138
D +IS RD + +WD C L V T +C I GS+ DS + ++
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLEC-LKVLTGHTGSVLCLQYDERVIVTGSS-DSTVRVWD 306
Query: 139 QQT-------IKKKRRSLEIHFITVGERGIVRMWNAD-SACLYEQKSS-DVTISFEMDDS 189
T I L + F G++ + D S +++ S+ D+T+ +
Sbjct: 307 VNTGEVLNTLIHHNEAVLHLRF----SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 362
Query: 190 KRGFTAATVLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFL 248
+ A V+ ++ ++ + D+ + +++T E + + L G+ I L++
Sbjct: 363 R---AAVNVVDFDDKYIVSASGDRTIKVWST-----STCEFV--RTLNGHKRGIACLQY- 411
Query: 249 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
++ + ++ ++++D+ +C VL GH E+V C+ + +I V+G+ D
Sbjct: 412 --RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RFDNKRI--VSGAYDGK 464
Query: 309 VRLWDSE---------SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+++WD + S C+ H G V + F + Q ++S S D TI +W F
Sbjct: 465 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQ--IISSSHDDTILIWDFLN 521
Query: 360 LSDDAE 365
+ A+
Sbjct: 522 VPPSAQ 527
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 251 (93.4 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 71/244 (29%), Positives = 119/244 (48%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+IVTGS D++VR+WD + + H AV + FS L +V+ S D +I VW
Sbjct: 292 VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL---MVTCSKDRSIAVWDMA 348
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+D + + V+ H +N V +D + + S DRT VW V T
Sbjct: 349 SATD-------ITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 399
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 400 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 455
Query: 479 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 456 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 514
Query: 530 VNLW 533
+ +W
Sbjct: 515 L-IW 517
Score = 184 (69.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 72/286 (25%), Positives = 125/286 (43%)
Query: 131 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 189
+ +S +IK + SLE + G G V D + SSD T+ + D
Sbjct: 251 EKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 307
Query: 190 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 243
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 308 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN 367
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 301
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 368 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 417
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 418 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 474
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D L + +V G+ + L ++ + + S D T +W
Sbjct: 475 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW 517
Score = 164 (62.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 51/194 (26%), Positives = 91/194 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
++SG D++IK+W D S L+ V+ H + L + ++ ++ TGS D
Sbjct: 253 IISGLRDNSIKIW--DKTS--------LECLKVLTGHTGSV--LCLQYDERVIVTGSSDS 300
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW---SISDGSCLKT 459
T VW + + T H + + FS + +++T S D++I +W S +D + +
Sbjct: 301 TVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRV 358
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 359 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 414
Query: 520 MFATGGSDALVNLW 533
+ +G SD + LW
Sbjct: 415 LVVSGSSDNTIRLW 428
Score = 139 (54.0 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 306
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
++ G L T H +VL F + G +V+C D + +W + + I H
Sbjct: 307 VNTGEVLNTLIHHNEAVLHLRF-SNGL-MVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W ST
Sbjct: 365 AVNVVDFDDKYIVSASG--DRTIKVWSTST 392
Score = 130 (50.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 55/213 (25%), Positives = 99/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + +
Sbjct: 259 DNSIKIWDKTSLECLKVLTGHTGSVLCLQY----DERVIVTGSSDSTVRVWDVNTGEVLN 314
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + S+G +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 315 TLIHHNEAVLHLRF-SNG-LMVTCSKDRSIAVWDMAS-ATDITLRRV-LVGHRAAVNVVD 370
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 371 FDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 425
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 426 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 457
Score = 124 (48.7 bits), Expect = 0.00034, P = 0.00034
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL A
Sbjct: 421 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDP 476
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL +H RV + D +IS+ D + +WD
Sbjct: 477 RAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 518
Score = 120 (47.3 bits), Expect = 0.00092, P = 0.00092
Identities = 66/306 (21%), Positives = 131/306 (42%)
Query: 85 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 138
D +IS RD + +WD C L V T +C I GS+ DS + ++
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLEC-LKVLTGHTGSVLCLQYDERVIVTGSS-DSTVRVWD 306
Query: 139 QQT-------IKKKRRSLEIHFITVGERGIVRMWNAD-SACLYEQKSS-DVTISFEMDDS 189
T I L + F G++ + D S +++ S+ D+T+ +
Sbjct: 307 VNTGEVLNTLIHHNEAVLHLRF----SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGH 362
Query: 190 KRGFTAATVLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFL 248
+ A V+ ++ ++ + D+ + +++T E + + L G+ I L++
Sbjct: 363 R---AAVNVVDFDDKYIVSASGDRTIKVWST-----STCEFV--RTLNGHKRGIACLQY- 411
Query: 249 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 308
++ + ++ ++++D+ +C VL GH E+V C+ + +I V+G+ D
Sbjct: 412 --RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RFDNKRI--VSGAYDGK 464
Query: 309 VRLWDSE---------SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+++WD + S C+ H G V + F + Q ++S S D TI +W F
Sbjct: 465 IKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQ--IISSSHDDTILIWDFLN 521
Query: 360 LSDDAE 365
+ A+
Sbjct: 522 VPPSAQ 527
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 224 (83.9 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 63/250 (25%), Positives = 113/250 (45%)
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
S G +L + GS D R+W +G H G + A+ ++KK N+++S D T
Sbjct: 245 SDGTLLAM-GSYDGFARIWTENGNLASTLGQ-HKGPIFALKWNKK-GNYVLSAGVDKTTI 301
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W D + +A+Q + + + N++ A C S D V RL
Sbjct: 302 IW--DAHTGEAKQQFPFHSAPALDVDWQ--NNMTFAS-----C--STDMCIHVCRLGCDH 350
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
V TF+GH + ++++ P ++ + S D T+KIWS+ +C+ + H+ + +
Sbjct: 351 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWS 410
Query: 474 TRGA---------QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 524
G + S D V+LW V G C T KH++ ++++A + A+G
Sbjct: 411 PTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASG 470
Query: 525 GSDALVNLWH 534
D V++W+
Sbjct: 471 SFDKYVHIWN 480
Score = 162 (62.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 50/214 (23%), Positives = 92/214 (42%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH----G 380
GH V A++ + + L SGS D T ++W+ + S+ + L+ H
Sbjct: 177 GHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSN 235
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVW-RLPDLVSVVTFRGHKRGIWSVEFSPVDQVVIT 439
KD+ SL + +L+ GS D A +W +L S T HK I++++++ V++
Sbjct: 236 KDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLAS--TLGQHKGPIFALKWNKKGNYVLS 293
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
A DKT IW G + F H++ L + SC D + + + +
Sbjct: 294 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNMTFASCSTDMCIHVCRLGCDHPV 352
Query: 500 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ H +++ A+ + A+ D + +W
Sbjct: 353 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 386
Score = 152 (58.6 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 39/166 (23%), Positives = 74/166 (44%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ--- 435
H ++N++ P+ L+ + S D T +W + V + H + I+++++SP
Sbjct: 358 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATS 417
Query: 436 ------VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
++ +AS D T+++W + G C T H V +F G + S D V
Sbjct: 418 NPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVH 477
Query: 490 LWTVRTGECIATYDKHE---DKIWALAVGKKTEMFATGGSDALVNL 532
+W ++G + +Y + W A G K A+ GS +++L
Sbjct: 478 IWNTQSGSLVHSYQGTGGIFEVCWN-ARGDKVGASASDGSVCVLDL 522
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHP------DTDKSLLF-SGSDDATVRVWDL 61
D + +W + C H + H + +I + P + + S++ S S D+TVR+WD+
Sbjct: 380 DMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDV 439
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
C TL KH V S+A + DG L S DK V++W+ + S
Sbjct: 440 EQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGS 485
Score = 130 (50.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 50/165 (30%), Positives = 75/165 (45%)
Query: 22 CTH---YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV- 77
C H F+GH V++I + P LL S SDD T+++W + CV L H +
Sbjct: 348 CDHPVKTFQGHTNEVNAIKWDPSG--MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIY 405
Query: 78 ------TSMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGS 128
T A ++ S+++ SA D V LWD+ C T+ + E V +V P G
Sbjct: 406 TIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGK 465
Query: 129 -----AFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRM-WNA 167
+FD ++ +N Q+ SL +H G GI + WNA
Sbjct: 466 YLASGSFDKYVHIWNTQS-----GSL-VHSYQ-GTGGIFEVCWNA 503
Score = 122 (48.0 bits), Expect = 0.00053, P = 0.00053
Identities = 35/143 (24%), Positives = 64/143 (44%)
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CLK 458
P+ +V+ RGH+ ++ ++PV ++ + SGD T +IW++++ S C++
Sbjct: 169 PNKATVL--RGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIR 226
Query: 459 TFEGH----TSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 514
GH V + + G + DG ++WT G +T +H+ I+AL
Sbjct: 227 E-GGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKW 284
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
KK + G D +W T
Sbjct: 285 NKKGNYVLSAGVDKTTIIWDAHT 307
Score = 120 (47.3 bits), Expect = 0.00087, P = 0.00087
Identities = 51/200 (25%), Positives = 86/200 (43%)
Query: 348 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
++H+ K DG D E P N KA V+ H ++ A P L+ +GS D TA +W
Sbjct: 153 NNHS-KPMEIDG---DVEIPPN-KA-TVLRGHESEVFICAWNPVSDLLASGSGDSTARIW 206
Query: 408 RLPD--------LVSVVTFR--GH----KRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
L + LV R GH + + S++++ ++ S D +IW+ +
Sbjct: 207 NLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWT-EN 265
Query: 454 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 513
G+ T H + + +G ++S G D +W TGE + H AL
Sbjct: 266 GNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAP--ALD 323
Query: 514 VGKKTEM-FATGGSDALVNL 532
V + M FA+ +D +++
Sbjct: 324 VDWQNNMTFASCSTDMCIHV 343
Score = 86 (35.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 21/73 (28%), Positives = 34/73 (46%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
++D +LL GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 244 NSDGTLLAMGSYDGFARIWTENGN-LASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTII 302
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 303 WDAHTGEAKQQFP 315
Score = 74 (31.1 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 26/89 (29%), Positives = 42/89 (47%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-----------LAKKCVAT--LDKH 73
+GH+ V ++P +D LL SGS D+T R+W+L + + C+ D
Sbjct: 176 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVP 233
Query: 74 FSR-VTSMAITSDGSTLISAGRDKVVNLW 101
++ VTS+ SDG+ L D +W
Sbjct: 234 SNKDVTSLDWNSDGTLLAMGSYDGFARIW 262
Score = 37 (18.1 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 73 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
H S V A L S D +W+L + S
Sbjct: 178 HESEVFICAWNPVSDLLASGSGDSTARIWNLNENS 212
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 249 (92.7 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 78/304 (25%), Positives = 132/304 (43%)
Query: 230 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 289
IL + G+ I F +Q +A A+ + ++ L + +Y GH ++V L
Sbjct: 9 ILERSFKGHKAAITSADFSPNCKQ-IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQ 67
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
S L+ + S+D +VRLW + + H V +V FS Q LV+ S D
Sbjct: 68 ---FSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQ-LLVTASED 123
Query: 350 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
+IKVWS + + H + +P+ L+ + S+D+T +W
Sbjct: 124 KSIKVWSM----------FRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
+ V F V+F+P + +A D +KIW I L+ ++ H+ V
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNC 233
Query: 470 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
SF G +V+ +DG VK+ + G I T H ++ ++ K E+ +GG+DA
Sbjct: 234 LSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQ 293
Query: 530 VNLW 533
V +W
Sbjct: 294 VLIW 297
Score = 142 (55.0 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
DR V +W +D + FK H V S+ F D LL + S+D +++VW + ++ +
Sbjct: 81 DRTVRLWVLDRKGKSSEFKAHTAPVRSVDF--SADGQLLVTASEDKSIKVWSMFRQRFLY 138
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+L +H V + DG ++S DK + +WD + C
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Score = 142 (55.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 33/126 (26%), Positives = 58/126 (46%)
Query: 409 LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 468
L D + +F+GHK I S +FSP + + TAS D + +WS+ + + GH V
Sbjct: 5 LEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVT 64
Query: 469 RASFLTRGAQIVSCGADGLVKLWTV-RTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 527
F +G + S D V+LW + R G+ + + H + ++ ++ T D
Sbjct: 65 SLQFSPQGNLLASASRDRTVRLWVLDRKGKS-SEFKAHTAPVRSVDFSADGQLLVTASED 123
Query: 528 ALVNLW 533
+ +W
Sbjct: 124 KSIKVW 129
Score = 137 (53.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 31/95 (32%), Positives = 51/95 (53%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D +++W + + + GHK VV+S+ F P + LL S S D TVR+W L K +
Sbjct: 39 DTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN--LLASASRDRTVRLWVLDRKGKSS 96
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H + V S+ ++DG L++A DK + +W +
Sbjct: 97 EFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSM 131
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 30/95 (31%), Positives = 50/95 (52%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G+D V +WD+ +++ H V+ + FHP SL+ + S D TV++ DL+ +
Sbjct: 205 GSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHP-LGNSLV-TASSDGTVKMLDLIEGRL 262
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
+ TL H V +++ + DG L S G D V +W
Sbjct: 263 IYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 119 (46.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + VW + + H V F PD L+ S S+D T+++WD K+CV
Sbjct: 123 DKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSCSEDKTIKIWDTTNKQCVN 180
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+ +G+ + SAG D V +WD+R
Sbjct: 181 NFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIR 216
Score = 104 (41.7 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 26/78 (33%), Positives = 38/78 (48%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
FKGHK ++S F P+ + + + S D + +W L H VTS+ +
Sbjct: 14 FKGHKAAITSADFSPNCKQ--IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 86 GSTLISAGRDKVVNLWDL 103
G+ L SA RD+ V LW L
Sbjct: 72 GNLLASASRDRTVRLWVL 89
Score = 92 (37.4 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 314
+A A + V+++D+ HS V CL L + +VT S D +V++ D
Sbjct: 201 IASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNS---LVTASSDGTVKMLDL 257
Query: 315 -ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM-NLK 371
E R + GH G V V+FSK + L SG +D + +W + + + P NLK
Sbjct: 258 IEGRLIYTL-QGHTGPVFTVSFSKDGE-LLTSGGADAQVLIWRTNFIHLHCKDPKRNLK 314
Score = 73 (30.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 40/204 (19%), Positives = 85/204 (41%)
Query: 209 TADQQLLLYTTVEVPEKKMELILSKR----LVGYNEEILDLKFLGEEEQYLAVATNIEQV 264
+AD QLL+ T E K+ + +R L + + KF + + + + + +
Sbjct: 111 SADGQLLV-TASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKF-SPDGRLIVSCSEDKTI 168
Query: 265 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 324
+++D ++ C + S+ V + + I + D++V++WD +
Sbjct: 169 KIWDTTNKQC---VNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQ 225
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
H V ++F L N LV+ SSD T+K+ D + + + H +
Sbjct: 226 VHSCGVNCLSFHP-LGNSLVTASSDGTVKM--LDLIEG--------RLIYTLQGHTGPVF 274
Query: 385 SLAVAPNDSLVCTGSQDRTACVWR 408
+++ + + L+ +G D +WR
Sbjct: 275 TVSFSKDGELLTSGGADAQVLIWR 298
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 240 (89.5 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 40 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 88
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 89 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 148
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 149 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 208
Query: 504 KHEDKI----WALAVGKKTEMFATG 524
+HE + WA + ATG
Sbjct: 209 EHEHVVECISWAPESSYSSISEATG 233
Score = 228 (85.3 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 67 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 123
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 374
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 124 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 182
Query: 375 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 431
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 183 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 240
Query: 432 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 241 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 300
Query: 492 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ C+ T + HE + +L K TG D V +W
Sbjct: 301 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 218 (81.8 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 79 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 134
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 135 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 193
Query: 353 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 402
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 194 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 253
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 254 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 313
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
H V F +V+ D VK+W R
Sbjct: 314 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 210 (79.0 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 36 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 95
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 96 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 156 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 196
Score = 202 (76.2 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 22 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 80
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 81 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 140
Query: 520 MFATGGSDALVNLWHDST 537
+ D + +W T
Sbjct: 141 HIVSASRDKTIKMWEVQT 158
Score = 184 (69.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 1 MFALLEGA--DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 58
+F+++ A D + VWD + G KGH V I F D LL S S D T+++
Sbjct: 54 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF--DHSGKLLASCSADMTIKL 111
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C T +
Sbjct: 112 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-- 169
Query: 119 EAVCAIPPGSAFDSFLSSYNQQTIK 143
E V + P S N QT++
Sbjct: 170 EWVRMVRPNQDGTLIASCSNDQTVR 194
Score = 180 (68.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 105 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCV 162
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H V + DG+ + S D+ V +W + CK + +E V + P
Sbjct: 163 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 222
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 172
S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 223 SSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 266
Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
LL G+ D+ + +WDV G C GH V +LFH + + S +DD T+RVWD
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYK 303
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 304 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 163 (62.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH+ V+ ++FHP S++ S S+DAT++VWD TL H V ++ G
Sbjct: 41 GHRSPVTRVIFHPVF--SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK--K 144
L S D + LWD + + C T+ ++ V +V +P G D +S+ +TIK +
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG---DHIVSASRDKTIKMWE 155
Query: 145 KRRSLEIHFITVGERGIVRMW--NADSACLYEQKSSDVTI 182
+ + T G R VRM N D L S+D T+
Sbjct: 156 VQTGYCVKTFT-GHREWVRMVRPNQDGT-LIASCSNDQTV 193
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 47 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 305
Query: 107 SCKLTVPTYE 116
C T+ +E
Sbjct: 306 RCMKTLNAHE 315
Score = 51 (23.0 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H S VT + S ++SA D + +WD
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 71
Score = 37 (18.1 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
GK +G D + +W ST
Sbjct: 240 GKPGPFLLSGSRDKTIKMWDVST 262
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 250 (93.1 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 71/244 (29%), Positives = 118/244 (48%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+IVTGS D++VR+WD S + H AV + F L +V+ S D +I VW
Sbjct: 277 VIVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFCNGL---MVTCSKDRSIAVWDMA 333
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+D + + V+ H +N V +D + + S DRT VW V T
Sbjct: 334 SATD-------ISLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 384
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 385 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 440
Query: 479 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 441 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 499
Query: 530 VNLW 533
+ +W
Sbjct: 500 L-IW 502
Score = 186 (70.5 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 73/286 (25%), Positives = 126/286 (44%)
Query: 131 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 189
D +S +IK ++SLE + G G V D + SSD T+ + D
Sbjct: 236 DKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 292
Query: 190 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 243
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 293 SSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVN 352
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 301
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 353 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 402
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 403 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 459
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D L + +V G+ + L ++ + + S D T +W
Sbjct: 460 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW 502
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
++SG D++IK+W D + +L+ V+ H + L + ++ ++ TGS D
Sbjct: 238 IISGLRDNSIKIW-------DKQ---SLECLKVLTGHTGSV--LCLQYDERVIVTGSSDS 285
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW---SISDGSCLKT 459
T VW + + T H + + F + +++T S D++I +W S +D S +
Sbjct: 286 TVRVWDVSSGEVLNTLIHHNEAVLHLRFC--NGLMVTCSKDRSIAVWDMASATDISLRRV 343
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 344 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 399
Query: 520 MFATGGSDALVNLW 533
+ +G SD + LW
Sbjct: 400 LVVSGSSDNTIRLW 413
Score = 142 (55.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 35/150 (23%), Positives = 68/150 (45%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 234 DDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 291
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 507
+S G L T H +VL F G +V+C D + +W + + I+ H
Sbjct: 292 VSSGEVLNTLIHHNEAVLHLRFCN-GL-MVTCSKDRSIAVWDMASATDISLRRVLVGHRA 349
Query: 508 KIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W ST
Sbjct: 350 AVNVVDFDDKYIVSASG--DRTIKVWSTST 377
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 32/109 (29%), Positives = 52/109 (47%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL A
Sbjct: 406 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDP 461
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
C+ TL +H RV + D +IS+ D + +WD + S
Sbjct: 462 RAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNVS 508
Score = 125 (49.1 bits), Expect = 0.00025, P = 0.00025
Identities = 52/213 (24%), Positives = 98/213 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD C GH G V + + D+ ++ +GS D+TVRVWD+ + + +
Sbjct: 244 DNSIKIWDKQSLECLKVLTGHTGSVLCLQY----DERVIVTGSSDSTVRVWDVSSGEVLN 299
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
TL H V + + +++ +D+ + +WD+ + +++ +V A+
Sbjct: 300 TLIHHNEAVLHLRFCN--GLMVTCSKDRSIAVWDMAS-ATDISLRRV-LVGHRAAVNVVD 355
Query: 129 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 184
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 356 FDDKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 410
Query: 185 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLL 216
+ D + G VL ++ L+ C+ D + ++
Sbjct: 411 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIV 442
>UNIPROTKB|F1NGY5 [details] [associations]
symbol:PLAA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0016005 "phospholipase A2 activator activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0006954 GO:GO:0016005
GeneTree:ENSGT00550000074944 InterPro:IPR015155 InterPro:IPR013535
Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396
OMA:VSECCRF EMBL:AADN02062576 IPI:IPI00577520
ProteinModelPortal:F1NGY5 Ensembl:ENSGALT00000002747 Uniprot:F1NGY5
Length = 805
Score = 253 (94.1 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 79/270 (29%), Positives = 128/270 (47%)
Query: 272 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVGT--GHM 327
+ CS L GH + V + G + V S+D + RLW D +R + GH
Sbjct: 21 LRCS--LLGHEQDVRGITRGLFPEGGFVSV--SRDRTARLWTPDGLNRGFTEMHCMRGHS 76
Query: 328 GAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
V V L + + +G +DH I V++ D + P+ V+ H +
Sbjct: 77 NFVSCVCIIPPSDLYPRGLIATGGNDHNICVFTVDNTA-----PLY-----VLKGHTNTV 126
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
SL+ +L+ +GS D T VW L D ++T +GH IW+V+ P +++T S D
Sbjct: 127 CSLSSGKFGTLL-SGSWDTTCKVW-LNDRC-MMTLQGHTAAIWAVKILPEQGLMLTGSAD 183
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W G C +T+ GH V + L+ + +SC D V+ W + +GEC+ Y
Sbjct: 184 KTIKLWKA--GRCERTYAGHEDCVRGLAILSE-MEFLSCSNDASVRRWHI-SGECLHVYY 239
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLW 533
H + I++++V + F T G D + +W
Sbjct: 240 GHTNYIYSVSVFPHCKDFITTGEDRSLRIW 269
Score = 166 (63.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 39/169 (23%), Positives = 76/169 (44%)
Query: 368 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWS 427
+N + + H I ++ + P L+ TGS D+T +W+ T+ GH+ +
Sbjct: 150 LNDRCMMTLQGHTAAIWAVKILPEQGLMLTGSADKTIKLWKAGRCER--TYAGHEDCVRG 207
Query: 428 VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGL 487
+ + ++ S D +++ W IS G CL + GHT+ + S ++ G D
Sbjct: 208 LAILS-EMEFLSCSNDASVRRWHIS-GECLHVYYGHTNYIYSVSVFPHCKDFITTGEDRS 265
Query: 488 VKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 536
+++W + GEC+ T +W V ++ G SD ++ ++ S
Sbjct: 266 LRIW--KQGECVQTIRLPAQSVWCCCVLDNDDI-VVGASDGIIRVFTKS 311
Score = 137 (53.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 34/102 (33%), Positives = 59/102 (57%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 313
+A N + V+ + + + YVL GH+ V C+LSSGK +++GS D + ++W
Sbjct: 96 IATGGNDHNICVFTVDNTAPLYVLKGHTNTV-----CSLSSGKFGTLLSGSWDTTCKVWL 150
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
++ RC + + GH A+ AV + Q +++GS+D TIK+W
Sbjct: 151 ND-RCMMTL-QGHTAAIWAVKILPE-QGLMLTGSADKTIKLW 189
Score = 125 (49.1 bits), Expect = 0.00045, P = 0.00045
Identities = 41/157 (26%), Positives = 70/157 (44%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVWDLLAKK 65
G D + V+ VD + KGH V S+ + K L SGS D T +VW L +
Sbjct: 100 GNDHNICVFTVDNTAPLYVLKGHTNTVCSL----SSGKFGTLLSGSWDTTCKVW--LNDR 153
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIP 125
C+ TL H + + ++ I + +++ DK + LW + C+ T +E + V +
Sbjct: 154 CMMTLQGHTAAIWAVKILPEQGLMLTGSADKTIKLW--KAGRCERTYAGHE--DCVRGLA 209
Query: 126 PGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIV 162
S + FLS N ++++ S E + G +
Sbjct: 210 ILSEME-FLSCSNDASVRRWHISGECLHVYYGHTNYI 245
Score = 114 (45.2 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 46/191 (24%), Positives = 85/191 (44%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L++TGS D +++LW + RC GH V +A +++ FL S S+D +++ W
Sbjct: 176 LMLTGSADKTIKLWKA-GRC-ERTYAGHEDCVRGLAILSEME-FL-SCSNDASVRRWHIS 231
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
G + V H I S++V P+ T +DR+ +W+ + V T
Sbjct: 232 G-----------ECLHVYYGHTNYIYSVSVFPHCKDFITTGEDRSLRIWKQGECVQ--TI 278
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIW--SISDGSCLKTFEGHTSSVLRASFLTRG 476
R + +W D +V+ AS D I+++ S+ + + + + + +AS +
Sbjct: 279 RLPAQSVWCCCVLDNDDIVVGAS-DGIIRVFTKSLERTASAEEIQAFENELSQASIDPKT 337
Query: 477 AQIVSCGADGL 487
+ AD L
Sbjct: 338 GDLGDINADDL 348
Score = 98 (39.6 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 35/125 (28%), Positives = 57/125 (45%)
Query: 9 DRKVLVWDVDG---GFCT-HYFKGHKGVVSSILFHPDTD---KSLLFSGSDDATVRVWDL 61
DR +W DG GF H +GH VS + P +D + L+ +G +D + V+ +
Sbjct: 51 DRTARLWTPDGLNRGFTEMHCMRGHSNFVSCVCIIPPSDLYPRGLIATGGNDHNICVFTV 110
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEA 120
+ L H + V S++ G TL+S D +W L D C +T+ + + A
Sbjct: 111 DNTAPLYVLKGHTNTVCSLSSGKFG-TLLSGSWDTTCKVW-LND-RCMMTLQGHTAAIWA 167
Query: 121 VCAIP 125
V +P
Sbjct: 168 VKILP 172
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 253 (94.1 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 75/248 (30%), Positives = 114/248 (45%)
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
C GK LI TG + LW+ + + H A+ A+ ++ Q +L+S
Sbjct: 140 CWSPEGKRLI-TGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQ-WLLSADQGG 197
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD--INSLAVAPNDSLVCTGSQDRTACVWR 408
+K W QP N+ + +AH KD I LA AP D T S D TA VW
Sbjct: 198 YVKYW----------QP-NMNNAHMFSAH-KDEAIRGLAFAPTDVKFATASDDGTARVWD 245
Query: 409 LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD--KTIKIWSISDGSCLKTFEGHTSS 466
RGH + +++ P ++ T S D + +KIW GSCL T + H SS
Sbjct: 246 FARYTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSS 305
Query: 467 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE-MFATGG 525
V+ F G +++ G D LVK++ +R + + TY H+ ++ +LA E +F +GG
Sbjct: 306 VMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGG 365
Query: 526 SDALVNLW 533
D + W
Sbjct: 366 GDGSIVYW 373
Score = 170 (64.9 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 56/262 (21%), Positives = 106/262 (40%)
Query: 277 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 336
+L H + L +S + +++ + V+ W A+ +AF+
Sbjct: 170 ILQAHDSAIRALKW---ASNEQWLLSADQGGYVKYWQPNMNNAHMFSAHKDEAIRGLAFA 226
Query: 337 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 396
F + S D T +VW F +++ V+ HG ++ + P L+
Sbjct: 227 PTDVKF-ATASDDGTARVWDFARYTEER----------VLRGHGAEVRCIDWHPTKGLIA 275
Query: 397 TGSQD--RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 454
TGS+D + +W + T + HK + +VEF+ ++T D +K++ I
Sbjct: 276 TGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMM 335
Query: 455 SCLKTFEGHTSSVLRASF--LTRGAQIVSCGADGLVKLWTVRTGECIATYDK-HEDKIWA 511
++T+ H V+ ++ + G VS G DG + W V + I + H+ IW+
Sbjct: 336 KEMRTYRAHKKEVISLAWHPIHEGL-FVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWS 394
Query: 512 LAVGKKTEMFATGGSDALVNLW 533
+ + ATG +D W
Sbjct: 395 MKWHPLGHILATGSNDNNTKFW 416
Score = 143 (55.4 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDAT--VRVWDLLAKKC 66
D VWD +GH V I +HP K L+ +GS D V++WD + C
Sbjct: 238 DGTARVWDFARYTEERVLRGHGAEVRCIDWHPT--KGLIATGSRDTQQPVKIWDPKSGSC 295
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+ATL +H S V ++ +G+ L++ GRD +V ++D+R
Sbjct: 296 LATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIR 333
Score = 134 (52.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 54/271 (19%), Positives = 113/271 (41%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L ++ I LK+ EQ+L A V+ + +M+ +++ + H + + A +
Sbjct: 171 LQAHDSAIRALKW-ASNEQWLLSADQGGYVKYWQ-PNMNNAHMFSAHKDEAI--RGLAFA 226
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD--HTI 352
+ T S D + R+WD V GH V + + + + +GS D +
Sbjct: 227 PTDVKFATASDDGTARVWDFARYTEERVLRGHGAEVRCIDWHPT-KGLIATGSRDTQQPV 285
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
K+W P + A + H + ++ N + + TG +D ++ + +
Sbjct: 286 KIWD----------PKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMM 335
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQ-VVITASGDKTIKIWSISDGSCLKTFE-GHTSSVLRA 470
+ T+R HK+ + S+ + P+ + + ++ GD +I W + + E H ++
Sbjct: 336 KEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSM 395
Query: 471 SFLTRGAQIVSCGA-DGLVKLWTV-RTGECI 499
+ G I++ G+ D K W R G+ +
Sbjct: 396 KWHPLG-HILATGSNDNNTKFWARNRPGDTV 425
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 228 (85.3 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 60/245 (24%), Positives = 111/245 (45%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L+ TGS D R+W + +G H G + A+ +++K N+++S D T +W D
Sbjct: 302 LLATGSYDGFARIWTEDGNLASTLGQ-HKGPIFALKWNRK-GNYILSAGVDKTTIIW--D 357
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+ +A+Q + A D++ N++ + S D V RL V TF
Sbjct: 358 AHTGEAKQQFPFHS-----APALDVDW----QNNTTFASCSTDMCIHVCRLGCDRPVKTF 408
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA- 477
+GH + ++++ P ++ + S D T+KIWS+ C+ + H + + G
Sbjct: 409 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPA 468
Query: 478 --------QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
+ S D V+LW + G C T KH++ ++++A + A+G D
Sbjct: 469 TSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKC 528
Query: 530 VNLWH 534
V++W+
Sbjct: 529 VHIWN 533
Score = 172 (65.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 51/214 (23%), Positives = 93/214 (43%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH----G 380
GH V A++ + + L SGS D T ++W+ + S+ + L+ H
Sbjct: 230 GHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSN 288
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLP-DLVSVVTFRGHKRGIWSVEFSPVDQVVIT 439
KD+ SL N +L+ TGS D A +W +L S T HK I++++++ +++
Sbjct: 289 KDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLAS--TLGQHKGPIFALKWNRKGNYILS 346
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
A DKT IW G + F H++ L + SC D + + + +
Sbjct: 347 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTDMCIHVCRLGCDRPV 405
Query: 500 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ H +++ A+ + A+ D + +W
Sbjct: 406 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 439
Score = 155 (59.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 40/166 (24%), Positives = 77/166 (46%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ--- 435
H ++N++ P+ L+ + S D T +W + V + + H + I+++++SP
Sbjct: 411 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATS 470
Query: 436 ------VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
++ +AS D T+++W I G C T H V +F G + S D V
Sbjct: 471 NPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVH 530
Query: 490 LWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSDALVNL 532
+W ++G + +Y + I+ + A G K A+ GS +++L
Sbjct: 531 IWNTQSGNLVHSY-RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 575
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD-------TDKSLLFSGSDDATVRVWDL 61
D + +W + C H + H + +I + P +L S S D+TVR+WD+
Sbjct: 433 DMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDI 492
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C TL KH V S+A + DG L S DK V++W+
Sbjct: 493 ERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN 533
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 35/144 (24%), Positives = 64/144 (44%)
Query: 409 LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CL 457
+P + V RGH+ ++ ++PV ++ + SGD T +IW++++ S C+
Sbjct: 220 IPSSKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 278
Query: 458 KTFEGH----TSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 513
+ GH V + T G + + DG ++WT G +T +H+ I+AL
Sbjct: 279 RE-GGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALK 336
Query: 514 VGKKTEMFATGGSDALVNLWHDST 537
+K + G D +W T
Sbjct: 337 WNRKGNYILSAGVDKTTIIWDAHT 360
Score = 116 (45.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 34/130 (26%), Positives = 61/130 (46%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC- 291
K G+ E+ +K+ LA ++ ++++ + C + L H++ + +
Sbjct: 406 KTFQGHTNEVNAIKW-DPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSP 464
Query: 292 ---ALSS--GKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
A S+ I++ + S D++VRLWD E C T H V +VAFS +L SG
Sbjct: 465 TGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPD-GKYLASG 523
Query: 347 SSDHTIKVWS 356
S D + +W+
Sbjct: 524 SFDKCVHIWN 533
Score = 86 (35.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+T+ +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 297 NTNGTLLATGSYDGFARIWTEDGN-LASTLGQHKGPIFALKWNRKGNYILSAGVDKTTII 355
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 356 WDAHTGEAKQQFP 368
Score = 70 (29.7 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
+GH+ V ++P +D LL SGS D+T R+W+L
Sbjct: 229 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNL 261
Score = 37 (18.1 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 73 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
H S V A L S D +W+L + S
Sbjct: 231 HESEVFICAWNPVSDLLASGSGDSTARIWNLNENS 265
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 249 (92.7 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 72/245 (29%), Positives = 120/245 (48%)
Query: 299 LIVTGSKDNSV-RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 357
+IVTGS D++V R+WD + + H AV + FS L +V+ S D +I VW
Sbjct: 272 VIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL---MVTCSKDRSIAVW-- 326
Query: 358 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 417
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 327 -----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRT 379
Query: 418 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 477
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F +
Sbjct: 380 LNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK-- 435
Query: 478 QIVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDA 528
+IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D
Sbjct: 436 RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDT 494
Query: 529 LVNLW 533
++ +W
Sbjct: 495 IL-IW 498
Score = 190 (71.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 73/286 (25%), Positives = 126/286 (44%)
Query: 131 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 189
+ +S +IK + SLE + G G V D + SSD T+S + D
Sbjct: 231 EKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTG-SSDSTVS-RVWDV 288
Query: 190 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 243
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 289 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN 348
Query: 244 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 301
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 349 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 398
Query: 302 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 361
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 399 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 455
Query: 362 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D L + +V G+ + L ++ + + S D T +W
Sbjct: 456 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW 498
Score = 133 (51.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 421 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 480
+ +G++ +++ D+ +I+ D +IKIW + CLK GHT SVL + R IV
Sbjct: 219 NSKGVYCLQYD--DEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIV 274
Query: 481 SCGADGLV-KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ +D V ++W V TGE + T H + + L + T D + +W
Sbjct: 275 TGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVTCSKDRSIAVW 326
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 34/151 (22%), Positives = 68/151 (45%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTI-KIW 449
+D + +G +D + +W L + GH + +++ ++V++T S D T+ ++W
Sbjct: 229 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVSRVW 286
Query: 450 SISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHE 506
++ G L T H +VL F + G +V+C D + +W + + I H
Sbjct: 287 DVNTGEVLNTLIHHNEAVLHLRF-SNGL-MVTCSKDRSIAVWDMASPTDITLRRVLVGHR 344
Query: 507 DKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ + K + A+G D + +W ST
Sbjct: 345 AAVNVVDFDDKYIVSASG--DRTIKVWSTST 373
Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK-- 65
+D + +WD++ G C +GH+ +V I F D + SG+ D ++VWDL A
Sbjct: 402 SDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDP 457
Query: 66 -------CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL +H RV + D +IS+ D + +WD
Sbjct: 458 RAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 499
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 265 (98.3 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 57/208 (27%), Positives = 96/208 (46%)
Query: 326 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 385
H G V ++ KK L++G D+ + +WS + PM+L H ++S
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTS----PMSL------CGHTSPVDS 63
Query: 386 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 445
+A + LV G+ +W L + V F GH+ +VEF P + + + S D
Sbjct: 64 VAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTN 123
Query: 446 IKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKH 505
+++W C++T++GHT + F G +VS G D +VK+W + G+ + + H
Sbjct: 124 LRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCH 183
Query: 506 EDKIWALAVGKKTEMFATGGSDALVNLW 533
E I +L + ATG +D V W
Sbjct: 184 EGPIRSLDFHPLEFLLATGSADRTVKFW 211
Score = 227 (85.0 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 61/230 (26%), Positives = 108/230 (46%)
Query: 263 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 322
+V ++ + + L GH+ V D+ A +S ++L++ G+ ++LWD E V
Sbjct: 39 KVNLWSIGKTTSPMSLCGHTSPV---DSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRA 95
Query: 323 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 382
TGH AV F FL SGSSD ++VW D + ++ H +
Sbjct: 96 FTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW-------DTRKKGCIQT---YKGHTRG 144
Query: 383 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 442
I+++ +P+ V +G D VW L + F+ H+ I S++F P++ ++ T S
Sbjct: 145 ISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSA 204
Query: 443 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
D+T+K W + + T + V +F G Q + CG D +K+++
Sbjct: 205 DRTVKFWDLETFELIGTTRPEATGVRAIAFHPDG-QTLFCGLDDGLKVYS 253
Score = 175 (66.7 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 36/101 (35%), Positives = 55/101 (54%)
Query: 4 LLEGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
+L GA V+ +WD++ F GH+ S++ FHP + L SGS D +RVWD
Sbjct: 73 VLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE--FLASGSSDTNLRVWDTR 130
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
K C+ T H ++++ + DG ++S G D VV +WDL
Sbjct: 131 KKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL 171
Score = 148 (57.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 36/103 (34%), Positives = 52/103 (50%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWD+ G H FK H+G + S+ FHP + LL +GS D TV+ WDL +
Sbjct: 161 GLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPL--EFLLATGSADRTVKFWDLETFEL 218
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 109
+ T + V ++A DG TL G D + ++ C+
Sbjct: 219 IGTTRPEATGVRAIAFHPDGQTLF-CGLDDGLKVYSWEPVICR 260
Score = 135 (52.6 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 43/156 (27%), Positives = 66/156 (42%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
+D + VWD C +KGH +S+I F PD + SG D V+VWDL A K +
Sbjct: 120 SDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDG--RWVVSGGLDNVVKVWDLTAGKLL 177
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC-KLTVPTYEMVEAVCAIPP 126
H + S+ L + D+ V WDL + T P V A+ P
Sbjct: 178 HEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPD 237
Query: 127 GSAF----DSFLSSYNQQTIKKKRRSLEIHFITVGE 158
G D L Y+ + + R +++ + T+G+
Sbjct: 238 GQTLFCGLDDGLKVYSWEPVIC-RDGVDMGWSTLGD 272
Score = 109 (43.4 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 33/122 (27%), Positives = 54/122 (44%)
Query: 20 GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTS 79
G+ F H G V+ + T + LL +G DD V +W + +L H S V S
Sbjct: 5 GYKLQEFVAHSGNVNCLSIGKKTSR-LLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDS 63
Query: 80 MAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQ 139
+A S+ +++ V+ LWDL + K+ V + + C+ F FL+S +
Sbjct: 64 VAFNSEEVLVLAGASSGVIKLWDLEE--SKM-VRAFTGHRSNCSAVEFHPFGEFLASGSS 120
Query: 140 QT 141
T
Sbjct: 121 DT 122
Score = 108 (43.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 27/106 (25%), Positives = 50/106 (47%)
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
++LA ++ ++V+D C GH+ + T S +V+G DN V++W
Sbjct: 113 EFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGI---STIEFSPDGRWVVSGGLDNVVKVW 169
Query: 313 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
D + + H G + ++ F L+ L +GS+D T+K W +
Sbjct: 170 DLTAGKLLHEFKCHEGPIRSLDFHP-LEFLLATGSADRTVKFWDLE 214
Score = 39 (18.8 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 692 IEPDTEAREVKAESLVDS 709
+ PD E RE+K VDS
Sbjct: 336 VSPDYETREIK-NIYVDS 352
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 197 (74.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 57/209 (27%), Positives = 92/209 (44%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH+ V A+ N LVSG D ++VW+ E L+ H +
Sbjct: 290 GHVMGVWAMV---PWDNILVSGGCDREVRVWNMA----TGESIYLLRG------HTSTVR 336
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
L ++ ++ + +GS+D T +W L GH+ + + +V++ S D
Sbjct: 337 CLKMSDKNTAI-SGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVH--GDIVVSGSYDT 393
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
T ++WSIS+G L+ GH S + +F G +I + D V++W TG+C A
Sbjct: 394 TARVWSISEGRFLRALSGHFSQIYAIAF--DGRRIATGSLDTSVRIWDPNTGQCHAILQG 451
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLW 533
H + L + T TGGSD V +W
Sbjct: 452 HTSLVGQLQMSGDT--LVTGGSDGSVRVW 478
Score = 187 (70.9 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 55/215 (25%), Positives = 98/215 (45%)
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
+Y+ + + ++ VYD + + L GH + A+ ++V+G D VR+W
Sbjct: 264 KYIVASLDNAKIHVYDTNGEN-QKTLEGH-----VMGVWAMVPWDNILVSGGCDREVRVW 317
Query: 313 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 372
+ + + + GH V + S K N +SGS D T+++W
Sbjct: 318 NMATGESIYLLRGHTSTVRCLKMSDK--NTAISGSRDTTLRIWDL----------RTGTC 365
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
++V+ H + LAV + +V +GS D TA VW + + + GH I+++ F
Sbjct: 366 RSVLVGHQASVRCLAV--HGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFD- 422
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV 467
+ + T S D +++IW + G C +GHTS V
Sbjct: 423 -GRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLV 456
Score = 182 (69.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 44/152 (28%), Positives = 74/152 (48%)
Query: 387 AVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTI 446
A+ P D+++ +G DR VW + S+ RGH + ++ S + I+ S D T+
Sbjct: 297 AMVPWDNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKN-TAISGSRDTTL 355
Query: 447 KIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 506
+IW + G+C GH +SV R G +VS D ++W++ G + H
Sbjct: 356 RIWDLRTGTCRSVLVGHQASV-RC-LAVHGDIVVSGSYDTTARVWSISEGRFLRALSGHF 413
Query: 507 DKIWALAV-GKKTEMFATGGSDALVNLWHDST 537
+I+A+A G++ ATG D V +W +T
Sbjct: 414 SQIYAIAFDGRR---IATGSLDTSVRIWDPNT 442
Score = 163 (62.4 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 48/195 (24%), Positives = 91/195 (46%)
Query: 341 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 400
+ +VSGS D T +VWS + L+A ++ H I A+A + + TGS
Sbjct: 384 DIVVSGSYDTTARVWSIS-------EGRFLRA---LSGHFSQI--YAIAFDGRRIATGSL 431
Query: 401 DRTACVWRLPDLVSV-VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
D + +W P+ +GH + ++ S ++T D ++++WS++ + +
Sbjct: 432 DTSVRIWD-PNTGQCHAILQGHTSLVGQLQMS--GDTLVTGGSDGSVRVWSLTRMAPIHR 488
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK-KT 518
H +SV F +IVS G+DG VK+W +RTG+ + D +W + + K
Sbjct: 489 LAAHDNSVTSLQFDNN--RIVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKA 546
Query: 519 EMFATGGSDALVNLW 533
+ ++ ++ +W
Sbjct: 547 VIMSSRSGRTVMEVW 561
Score = 157 (60.3 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 58/220 (26%), Positives = 99/220 (45%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQV-QVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
LVG+ + L G+ + V+ + + +V+ +S L+GH + + A
Sbjct: 369 LVGHQASVRCLAVHGD----IVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAI---AF 421
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
+I TGS D SVR+WD + C + GH VG + S + LV+G SD +++
Sbjct: 422 DGRRI--ATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMSG---DTLVTGGSDGSVR 476
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
VWS ++ P++ +AAH + SL N+ +V GS R VW L
Sbjct: 477 VWSLTRMA-----PIHR-----LAAHDNSVTSLQF-DNNRIVSGGSDGRVK-VWCLRTGQ 524
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTI-KIWSIS 452
+ +W V F V++++ +T+ ++WS S
Sbjct: 525 LLRELSTPSDTVWRVTFEEEKAVIMSSRSGRTVMEVWSFS 564
Score = 139 (54.0 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G DR+V VW++ G + +GH V + +DK+ SGS D T+R+WDL C
Sbjct: 309 GCDREVRVWNMATGESIYLLRGHTSTVRCLKM---SDKNTAISGSRDTTLRIWDLRTGTC 365
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
+ L H + V +A+ G ++S D +W + +
Sbjct: 366 RSVLVGHQASVRCLAV--HGDIVVSGSYDTTARVWSISE 402
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/106 (30%), Positives = 48/106 (45%)
Query: 3 ALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
A+ D + +WD+ G C GH+ V + H D ++ SGS D T RVW +
Sbjct: 346 AISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVHGD----IVVSGSYDTTARVWSIS 401
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+ + L HFS++ AI DG + + D V +WD C
Sbjct: 402 EGRFLRALSGHFSQI--YAIAFDGRRIATGSLDTSVRIWDPNTGQC 445
Score = 133 (51.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 32/96 (33%), Positives = 46/96 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V +WD + G C +GH +V + DT L +G D +VRVW L +
Sbjct: 432 DTSVRIWDPNTGQCHAILQGHTSLVGQLQMSGDT----LVTGGSDGSVRVWSLTRMAPIH 487
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
L H + VTS+ D + ++S G D V +W LR
Sbjct: 488 RLAAHDNSVTSLQF--DNNRIVSGGSDGRVKVWCLR 521
Score = 115 (45.5 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 35/108 (32%), Positives = 56/108 (51%)
Query: 3 ALLEGADRKVLVWDVDGGFCTHYFKGH-KGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
A L+ A K+ V+D +G +GH GV + + + ++L SG D VRVW++
Sbjct: 268 ASLDNA--KIHVYDTNGEN-QKTLEGHVMGVWAMVPWD-----NILVSGGCDREVRVWNM 319
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 109
+ + L H S V + + SD +T IS RD + +WDLR +C+
Sbjct: 320 ATGESIYLLRGHTSTVRCLKM-SDKNTAISGSRDTTLRIWDLRTGTCR 366
Score = 40 (19.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 13/54 (24%), Positives = 22/54 (40%)
Query: 126 PGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSD 179
P S +++S + QT K++ R L + + I W+ C S D
Sbjct: 199 PRSLSGDWIASSSIQTRKRRVRPLSYKYHFKQKYMIESAWSKGGRCTQRHISPD 252
>RGD|1594165 [details] [associations]
symbol:Gnb1l "guanine nucleotide binding protein (G protein),
beta polypeptide 1-like" species:10116 "Rattus norvegicus"
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0035176 "social behavior"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1594165 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:54584 OMA:HEEPVMD
GeneTree:ENSGT00390000018606 IPI:IPI00959938 RefSeq:XP_001057185.3
RefSeq:XP_002724806.2 ProteinModelPortal:D4A2F0
Ensembl:ENSRNOT00000002596 GeneID:680266 KEGG:rno:680266
ArrayExpress:D4A2F0 Uniprot:D4A2F0
Length = 326
Score = 163 (62.4 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 72/271 (26%), Positives = 122/271 (45%)
Query: 191 RGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGE 250
+G T LP Q LL D +L L+ E M+ + VG+ + + ++ G+
Sbjct: 68 QGVTWLKTLPQGQQLLSQGRDPRLCLWDLAEGRNTVMDSVQLDS-VGFCKSSILVR--GQ 124
Query: 251 EEQYLAV-ATNIEQVQVYDLSSMSCSYVLAGHSE----IVLCLDTCALSSG-KILIVTGS 304
LAV ++VQ+ ++ S + L ++ + +CL +S + L++ G
Sbjct: 125 LCWMLAVPGKGSDEVQILEMPSKTSVCTLKPEADAKPGMPMCLGLWQTNSSLRPLLLAGY 184
Query: 305 KDNSVRLWD-SESRCCVGVGTGHMGAVGAVAF-SKKLQNFLVSGSSDHTIKVWSFDGLSD 362
+D SV LWD SE + C + T H V + F S+K + VSGS+ + VWS D
Sbjct: 185 EDGSVTLWDVSERKVCSQI-TCHEEPVMGLDFDSQKAKG--VSGSAGKVLAVWSLDD--- 238
Query: 363 DAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV--WRLPDLVSVVTFRG 420
+Q + +K + G I + + P+ L T D V WR ++V+ F
Sbjct: 239 --QQSLQVKKTHELINPG--IAEVTLRPDHRLFATAGWDHRIRVFHWRTIKPLAVLAF-- 292
Query: 421 HKRGIWSVEFSPVDQVVITASGDKTIKIWSI 451
H + V F+ D ++ S D+ I +WS+
Sbjct: 293 HSAPVHCVAFA-ADGLLAAGSKDQRISVWSL 322
Score = 127 (49.8 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 27 KGHKGVVSSILFHPD---TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSR-VTSMAI 82
+G + V+++ F P + LLFSGS + V +W L ++ VATL+ H + VT +
Sbjct: 16 RGTQSAVNTLHFCPAPGAAENPLLFSGSQNGLVHIWSLQTRRIVATLNGHGGQGVTWLKT 75
Query: 83 TSDGSTLISAGRDKVVNLWDLRD 105
G L+S GRD + LWDL +
Sbjct: 76 LPQGQQLLSQGRDPRLCLWDLAE 98
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 242 (90.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 46/177 (25%), Positives = 91/177 (51%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH +V V+ S + ++ + SSD TIK+WS + + + + H + I+
Sbjct: 52 GHEKSVTCVSVSPN-KRWIATSSSDGTIKIWS----------ALTFRLECTLFGHYRGIS 100
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 444
+ A + + S D+T +W SV +GH + S++F+P+ ++++ S D+
Sbjct: 101 QVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDE 160
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
T++IW++ DG+CL+ H+ ++ S G + DG+ ++W V +G+C+ T
Sbjct: 161 TVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKT 217
Score = 217 (81.4 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 44/155 (28%), Positives = 75/155 (48%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 438
H K + ++V+PN + T S D T +W T GH RGI V+++ + +
Sbjct: 53 HEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLA 112
Query: 439 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 498
+AS DKTI+IW ++ +GHT+ V F G +VS D V++W ++ G C
Sbjct: 113 SASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTC 172
Query: 499 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ H + I ++++ + AT D + +W
Sbjct: 173 LRMLPAHSEPIISVSISADGTLCATASYDGMARIW 207
Score = 167 (63.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 36/104 (34%), Positives = 56/104 (53%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ + +WD + KGH VSSI F+P +LL SGS D TVR+W+L C+
Sbjct: 117 DKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLG--TLLVSGSWDETVRIWNLQDGTCLR 174
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
L H + S++I++DG+ +A D + +WD+ C T+
Sbjct: 175 MLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTL 218
Score = 167 (63.8 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 47/233 (20%), Positives = 109/233 (46%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L G+ + + + + ++++A +++ ++++ + L GH + +
Sbjct: 50 LFGHEKSVTCVS-VSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGI---SQVKWA 105
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
+G + + S D ++R+WD E RC V GH V ++ F+ L LVSGS D T+++
Sbjct: 106 TGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNP-LGTLLVSGSWDETVRI 164
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 414
W+ L D ++ AH + I S++++ + +L T S D A +W +
Sbjct: 165 WN---LQDGT-------CLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQC 214
Query: 415 VVTF-RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 466
+ T + +++F+ + ++ ++ + I++W ++ F+ H ++
Sbjct: 215 LKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNT 267
Score = 133 (51.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC-VATLDKHFSRVTSM 80
CT + GH +S + + T L S SDD T+R+WD K+C V L H + V+S+
Sbjct: 90 CTLF--GHYRGISQVKWA--TGSKYLASASDDKTIRIWDF-EKRCSVRCLKGHTNYVSSI 144
Query: 81 AITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY 115
G+ L+S D+ V +W+L+D +C +P +
Sbjct: 145 DFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAH 179
Score = 44 (20.5 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 434 DQVVITASGDKTIKIWS-----ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 488
D ++ S D TI+I I D S + + TS +L + L G I++ G D V
Sbjct: 305 DAYLLIPSEDGTIQITDPSTKIIIDDSIRHSDDPETS-LLNVTSL--GPFIITSGTDPYV 361
Query: 489 KLW 491
++W
Sbjct: 362 RVW 364
Score = 42 (19.8 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 9/54 (16%), Positives = 25/54 (46%)
Query: 304 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS-KKLQNFLVSGSSDHTIKVWS 356
S+D ++++ D ++ + H + L F+++ +D ++VW+
Sbjct: 312 SEDGTIQITDPSTKIIIDDSIRHSDDPETSLLNVTSLGPFIITSGTDPYVRVWA 365
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 211 (79.3 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 65/275 (23%), Positives = 118/275 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
+ ++DL + L+GHS+ V T K+ +TGS D ++R+W+ + C+
Sbjct: 324 IGIWDLFTGKLIRRLSGHSDGV---KTLYFDDRKL--ITGSLDKTIRVWNYITGECISTY 378
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
GH +V +V Q +VSGS+D T+KVW + + + H + +
Sbjct: 379 RGHSDSVLSV---DSYQKVIVSGSADKTVKVWHVES-----------RTCYTLRGHTEWV 424
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV---EFSPVDQVVI-- 438
N + + P + S D T +W + + FRGH + + V+ +
Sbjct: 425 NCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKIIPLTIKDVENLATDN 484
Query: 439 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 498
T+ G +++DG+ + + + ++SCG D +KLW V+TG+C
Sbjct: 485 TSDGSSPQDDPTMTDGADESDTPSNEQETVLDENIPYPTHLLSCGLDNTIKLWDVKTGKC 544
Query: 499 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
I T H + +W +A +G D + +W
Sbjct: 545 IRTQFGHVEGVWDIAADNFR--IISGSHDGSIKVW 577
Score = 192 (72.6 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 67/260 (25%), Positives = 120/260 (46%)
Query: 245 LKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGS 304
+K L +++ L + + ++V++ + C GHS+ VL +D S K+ IV+GS
Sbjct: 345 VKTLYFDDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVD----SYQKV-IVSGS 399
Query: 305 KDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDA 364
D +V++W ESR C + GH V V K + S S D TI++W S
Sbjct: 400 ADKTVKVWHVESRTCYTL-RGHTEWVNCVKLHPKSFSCF-SCSDDTTIRMWDIRTNSCLK 457
Query: 365 EQPMNL-KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKR 423
++ + + ++ KD+ +LA N S + D T + D +++
Sbjct: 458 VFRGHVGQVQKIIPLTIKDVENLAT-DNTSDGSSPQDDPT-----MTDGADESDTPSNEQ 511
Query: 424 GIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCG 483
E P +++ D TIK+W + G C++T GH V +I+S
Sbjct: 512 ETVLDENIPYPTHLLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVW--DIAADNFRIISGS 569
Query: 484 ADGLVKLWTVRTGECIATYD 503
DG +K+W +++G+C+ T++
Sbjct: 570 HDGSIKVWDLQSGKCMHTFN 589
Score = 192 (72.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 50/176 (28%), Positives = 82/176 (46%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L+ TGS D+++ +WD + + +GH V + F + L++GS D TI+VW++
Sbjct: 314 LLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDDRK---LITGSLDKTIRVWNY- 369
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+ + + G + L+V ++ +GS D+T VW + + T
Sbjct: 370 -----------ITGECISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVWHVESR-TCYTL 417
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 474
RGH + V+ P + S D TI++W I SCLK F GH V + LT
Sbjct: 418 RGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKIIPLT 473
Score = 186 (70.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 62/233 (26%), Positives = 109/233 (46%)
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQ-VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSS 295
G+++ +L + + Q + V+ + ++ V+V+ + S +C Y L GH+E V C+ L
Sbjct: 380 GHSDSVLSV----DSYQKVIVSGSADKTVKVWHVESRTC-YTLRGHTEWVNCVK---LHP 431
Query: 296 GKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA--FSKKLQNFLVSGSSDHTIK 353
+ S D ++R+WD + C+ V GH+G V + K ++N +SD +
Sbjct: 432 KSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKIIPLTIKDVENLATDNTSDGSSP 491
Query: 354 V---WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
DG +D+++ P N + + V+ D N P L C D T +W +
Sbjct: 492 QDDPTMTDG-ADESDTPSN-EQETVL-----DEN--IPYPTHLLSC--GLDNTIKLWDVK 540
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQV-VITASGDKTIKIWSISDGSCLKTFEG 462
+ T GH G+W + D +I+ S D +IK+W + G C+ TF G
Sbjct: 541 TGKCIRTQFGHVEGVWDIA---ADNFRIISGSHDGSIKVWDLQSGKCMHTFNG 590
Score = 181 (68.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 36/117 (30%), Positives = 64/117 (54%)
Query: 418 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 477
F+GH G+ +++F+ +++ T S D TI IW + G ++ GH+ V F R
Sbjct: 298 FKGHMDGVLTLQFNY--RLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDDR-- 353
Query: 478 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 534
++++ D +++W TGECI+TY H D + L+V ++ +G +D V +WH
Sbjct: 354 KLITGSLDKTIRVWNYITGECISTYRGHSDSV--LSVDSYQKVIVSGSADKTVKVWH 408
Score = 179 (68.1 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 45/143 (31%), Positives = 70/143 (48%)
Query: 391 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 450
N L+ TGS D T +W L + GH G+ ++ F D+ +IT S DKTI++W+
Sbjct: 311 NYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFD--DRKLITGSLDKTIRVWN 368
Query: 451 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 510
G C+ T+ GH+ SVL + IVS AD VK+W V + C T H + +
Sbjct: 369 YITGECISTYRGHSDSVLSVDSYQK--VIVSGSADKTVKVWHVESRTCY-TLRGHTEWVN 425
Query: 511 ALAVGKKTEMFATGGSDALVNLW 533
+ + K+ + D + +W
Sbjct: 426 CVKLHPKSFSCFSCSDDTTIRMW 448
Score = 140 (54.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 32/106 (30%), Positives = 54/106 (50%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+ D+ + VW+ G C ++GH V S+ D+ + ++ SGS D TV+VW +
Sbjct: 355 LITGSLDKTIRVWNYITGECISTYRGHSDSVLSV----DSYQKVIVSGSADKTVKVWHVE 410
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
++ C TL H V + + + S D + +WD+R SC
Sbjct: 411 SRTCY-TLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSC 455
Score = 134 (52.2 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 40/141 (28%), Positives = 64/141 (45%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D + +WD+ G GH V ++ F D+ L+ +GS D T+RVW+ +
Sbjct: 315 LFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFD---DRKLI-TGSLDKTIRVWNYI 370
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC 122
+C++T H V S + S ++S DK V +W + +C E V V
Sbjct: 371 TGECISTYRGHSDSVLS--VDSYQKVIVSGSADKTVKVWHVESRTCYTLRGHTEWVNCVK 428
Query: 123 AIPPGSAFDSFLSSYNQQTIK 143
P +F F S + TI+
Sbjct: 429 LHP--KSFSCFSCS-DDTTIR 446
Score = 114 (45.2 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 20 GFCT-HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVT 78
G C FKGH V ++ F+ LLF+GS D+T+ +WDL K + L H V
Sbjct: 291 GHCRIQEFKGHMDGVLTLQFN----YRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVK 346
Query: 79 SMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY 115
++ D LI+ DK + +W+ C + TY
Sbjct: 347 TLYF--DDRKLITGSLDKTIRVWNYITGEC---ISTY 378
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/80 (26%), Positives = 37/80 (46%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
L+S D+TIK+W D + ++ + H + + +A A N ++ +GS D
Sbjct: 525 LLSCGLDNTIKLW-------DVKTGKCIRTQF---GHVEGVWDIA-ADNFRII-SGSHDG 572
Query: 403 TACVWRLPDLVSVVTFRGHK 422
+ VW L + TF G +
Sbjct: 573 SIKVWDLQSGKCMHTFNGRR 592
Score = 43 (20.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 10/48 (20%), Positives = 22/48 (45%)
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQ 175
A +S S Q+T+ + H ++ G +++W+ + C+ Q
Sbjct: 501 ADESDTPSNEQETVLDENIPYPTHLLSCGLDNTIKLWDVKTGKCIRTQ 548
Score = 39 (18.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 289 DTCALSSGKILIVTGSKDN 307
DT + K L++TGS D+
Sbjct: 32 DTAMMPPLKRLLITGSSDD 50
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 249 (92.7 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 86/341 (25%), Positives = 150/341 (43%)
Query: 212 QQLLLYTTVEVPEKKM--ELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDL 269
Q L T+ ++ E++ + LS+ G+ E+I+ + + +A + V V++
Sbjct: 18 QSKLGNTSSKITEQQTTHDPALSRSFRGH-EDIITCADFDPKMRQVASCSKDSIVYVWNF 76
Query: 270 SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS--ESRCCVGVGTGHM 327
+ GH V C+ G+ + G +D +RLW + +S+C + H
Sbjct: 77 KPQQRPFKFVGHKGAVYCVKYSP--DGETIASCG-QDRQIRLWQNTVQSKC--SIIKAHC 131
Query: 328 GAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLA 387
GA+ +++FS +L+S S D T+K+W L D K A H + S
Sbjct: 132 GAIRSMSFSAD-GGYLLSSSDDKTLKLWR---LQDK-------KFMCSFAGHKNWVRSGV 180
Query: 388 VAPNDSLVCTGSQDRTACVWRL--PDLVS-------------VVTFRGHKRGIWSVEFSP 432
++P+ LV +GS D+T +W L +VS + ++ H + V F P
Sbjct: 181 ISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHP 240
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+I++S D IKI I ++ + H + V S G + S G+D +K+W
Sbjct: 241 DGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWD 300
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+R G I T ++ I + + + FATGGS L +W
Sbjct: 301 LRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVW 341
Score = 142 (55.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 48/182 (26%), Positives = 80/182 (43%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
+ H VS +LFHPD + L S S D +++ D+ + K + + H ++V S++I
Sbjct: 226 YSDHMDTVSQVLFHPDG--TCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPT 283
Query: 86 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLS--SYNQQTIK 143
G L SAG D + +WDLR T+ Y + + + + D F + S N +
Sbjct: 284 GYFLASAGSDSKIKIWDLRQGRQIYTL--YSNDKDITTVQFNQSGDYFATGGSQNLCMVW 341
Query: 144 KKRRSLEIHFITVGERGIVRMWNAD--SACLYEQKSSDVTISFEMDDSKRGFTAATVLPS 201
K I I +R VR + + S LY Q + + SK+ +++P
Sbjct: 342 KTNFDQNIQNIEQVQRSTVRQNDVEYSSGGLYAQTLFKTNKTASLSPSKK---TISIIPP 398
Query: 202 NQ 203
Q
Sbjct: 399 QQ 400
Score = 134 (52.2 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW-DLLAKKCV 67
D V VW+ F GHKG V + + PD + + S D +R+W + + KC
Sbjct: 68 DSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGET--IASCGQDRQIRLWQNTVQSKC- 124
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
+ + H + SM+ ++DG L+S+ DK + LW L+D
Sbjct: 125 SIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQD 162
Score = 132 (51.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 34/98 (34%), Positives = 49/98 (50%)
Query: 7 GADRKVLVW-DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 65
G DR++ +W + C+ K H G + S+ F D L S SDD T+++W L KK
Sbjct: 108 GQDRQIRLWQNTVQSKCS-IIKAHCGAIRSMSF--SADGGYLLSSSDDKTLKLWRLQDKK 164
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+ + H + V S I+ D + S DK V LWDL
Sbjct: 165 FMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDL 202
Score = 121 (47.7 bits), Expect = 0.00089, P = 0.00089
Identities = 56/179 (31%), Positives = 84/179 (46%)
Query: 4 LLEGADRKVL-VWDV-DGGF-CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
LL +D K L +W + D F C+ F GHK V S + PD L+ SGSDD TV +WD
Sbjct: 146 LLSSSDDKTLKLWRLQDKKFMCS--FAGHKNWVRSGVISPDM--RLVASGSDDKTVMLWD 201
Query: 61 LLAKKCVA---TLDK------------HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
L +K V+ TLD H V+ + DG+ LIS+ D + + D+R
Sbjct: 202 LNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIR- 260
Query: 106 YSCKLTVPTYEMVEAVC---AIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGI 161
S KL + Y +A +I P F + S ++ I R+ +I+ + ++ I
Sbjct: 261 -SNKL-IQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDI 317
Score = 107 (42.7 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 53/233 (22%), Positives = 89/233 (38%)
Query: 254 YLAVATNIEQVQVYDLSSMS--CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 311
YL +++ + ++++ L CS+ AGH V + +S L+ +GS D +V L
Sbjct: 145 YLLSSSDDKTLKLWRLQDKKFMCSF--AGHKNWVR---SGVISPDMRLVASGSDDKTVML 199
Query: 312 WDSESRCCVG-VGT--------------GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
WD + V T HM V V F L+S S DH IK+
Sbjct: 200 WDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPD-GTCLISSSFDHKIKIT- 257
Query: 357 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV 416
D S+ Q N AH +NS+++ P + + D +W L +
Sbjct: 258 -DIRSNKLIQHYN--------AHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIY 308
Query: 417 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 469
T + + I +V+F+ T +W + ++ E S +R
Sbjct: 309 TLYSNDKDITTVQFNQSGDYFATGGSQNLCMVWKTNFDQNIQNIEQVQRSTVR 361
Score = 94 (38.1 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
F+GH+ +++ F P + + S S D+ V VW+ ++ H V + + D
Sbjct: 43 FRGHEDIITCADFDPKMRQ--VASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPD 100
Query: 86 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS----FLSSYNQQT 141
G T+ S G+D+ + LW K ++ ++A C +F + LSS + +T
Sbjct: 101 GETIASCGQDRQIRLWQ-NTVQSKCSI-----IKAHCGAIRSMSFSADGGYLLSSSDDKT 154
Query: 142 IK 143
+K
Sbjct: 155 LK 156
Score = 38 (18.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 6/30 (20%), Positives = 17/30 (56%)
Query: 132 SFLSSYNQQTIKKKRRSLEIHFITVGERGI 161
SF+S +Q T+ K++++ + + + +
Sbjct: 570 SFVSQNHQNTLDPKQQTMNFGYSNIQDHSL 599
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 225 (84.3 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 60/245 (24%), Positives = 109/245 (44%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L+ TGS D R+W + +G H G + A+ +++K N+++S D T +W D
Sbjct: 294 LLATGSYDGFARIWTEDGNLASTLGQ-HKGPIFALKWNRK-GNYILSAGVDKTTIIW--D 349
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
+ +A+Q + + + N++ A C S D V RL V TF
Sbjct: 350 AHTGEAKQQFPFHSAPALDVDWQ--NNMTFAS-----C--STDMCIHVCRLGCDRPVKTF 400
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA- 477
+GH + ++++ P ++ + S D T+KIWS+ C+ + H + + G
Sbjct: 401 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPA 460
Query: 478 --------QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 529
+ S D V+LW + G C T KH++ ++++A A+G D
Sbjct: 461 TSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKC 520
Query: 530 VNLWH 534
V++W+
Sbjct: 521 VHIWN 525
Score = 171 (65.3 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 51/214 (23%), Positives = 93/214 (43%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH----G 380
GH V A++ + + L SGS D T ++W+ + S+ + L+ H
Sbjct: 222 GHESEVFICAWNP-VSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSN 280
Query: 381 KDINSLAVAPNDSLVCTGSQDRTACVWRLP-DLVSVVTFRGHKRGIWSVEFSPVDQVVIT 439
KD+ SL N +L+ TGS D A +W +L S T HK I++++++ +++
Sbjct: 281 KDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLAS--TLGQHKGPIFALKWNRKGNYILS 338
Query: 440 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 499
A DKT IW G + F H++ L + SC D + + + +
Sbjct: 339 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNMTFASCSTDMCIHVCRLGCDRPV 397
Query: 500 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ H +++ A+ + A+ D + +W
Sbjct: 398 KTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 431
Score = 155 (59.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 40/166 (24%), Positives = 77/166 (46%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ--- 435
H ++N++ P+ L+ + S D T +W + V + + H + I+++++SP
Sbjct: 403 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATS 462
Query: 436 ------VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
++ +AS D T+++W I G C T H V +F G + S D V
Sbjct: 463 NPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH 522
Query: 490 LWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSDALVNL 532
+W ++G + +Y + I+ + A G K A+ GS +++L
Sbjct: 523 IWNTQSGNLVHSY-RGTGGIFEVCWNARGDKVGASASDGSVCVLDL 567
Score = 135 (52.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD-------TDKSLLFSGSDDATVRVWDL 61
D + +W + C H + H + +I + P +L S S D+TVR+WD+
Sbjct: 425 DMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDI 484
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C TL KH V S+A + DG L S DK V++W+
Sbjct: 485 ERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 525
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 35/144 (24%), Positives = 64/144 (44%)
Query: 409 LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CL 457
+P + V RGH+ ++ ++PV ++ + SGD T +IW++++ S C+
Sbjct: 212 IPSSKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCI 270
Query: 458 KTFEGH----TSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 513
+ GH V + T G + + DG ++WT G +T +H+ I+AL
Sbjct: 271 RE-GGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALK 328
Query: 514 VGKKTEMFATGGSDALVNLWHDST 537
+K + G D +W T
Sbjct: 329 WNRKGNYILSAGVDKTTIIWDAHT 352
Score = 122 (48.0 bits), Expect = 0.00060, P = 0.00060
Identities = 46/185 (24%), Positives = 77/185 (41%)
Query: 363 DAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD--------LVS 414
D E + V+ H ++ A P L+ +GS D TA +W L + LV
Sbjct: 207 DGEVDIPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVL 266
Query: 415 VVTFR--GH----KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 468
R GH + + S++++ ++ T S D +IW+ DG+ T H +
Sbjct: 267 RHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIF 325
Query: 469 RASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM-FATGGSD 527
+ +G I+S G D +W TGE + H AL V + M FA+ +D
Sbjct: 326 ALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAP--ALDVDWQNNMTFASCSTD 383
Query: 528 ALVNL 532
+++
Sbjct: 384 MCIHV 388
Score = 116 (45.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 34/130 (26%), Positives = 61/130 (46%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC- 291
K G+ E+ +K+ LA ++ ++++ + C + L H++ + +
Sbjct: 398 KTFQGHTNEVNAIKW-DPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSP 456
Query: 292 ---ALSS--GKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
A S+ I++ + S D++VRLWD E C T H V +VAFS +L SG
Sbjct: 457 TGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPD-GRYLASG 515
Query: 347 SSDHTIKVWS 356
S D + +W+
Sbjct: 516 SFDKCVHIWN 525
Score = 86 (35.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+T+ +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 289 NTNGTLLATGSYDGFARIWTEDGN-LASTLGQHKGPIFALKWNRKGNYILSAGVDKTTII 347
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 348 WDAHTGEAKQQFP 360
Score = 70 (29.7 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
+GH+ V ++P +D LL SGS D+T R+W+L
Sbjct: 221 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNL 253
Score = 39 (18.8 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 13/48 (27%), Positives = 18/48 (37%)
Query: 60 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
D+ + K L H S V A L S D +W+L + S
Sbjct: 211 DIPSSKATV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENS 257
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 250 (93.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 81/294 (27%), Positives = 134/294 (45%)
Query: 216 LYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATN-IEQVQVYDLSSMSC 274
L+ E+P M LS + N + L + G+ ++A+ ++ + Q+ V++ S S
Sbjct: 277 LFGIYELPSFTMLYQLS--ITQSNIDTLTVNSTGD---WIAIGSSKLGQLLVWEWQSES- 330
Query: 275 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 334
YVL S L T SS I+TG+ D +++WD S C+ T H AV +
Sbjct: 331 -YVLKQQSHYD-ALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLC 388
Query: 335 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL 394
FSK+ N L S S D +++ W D + N + A + +AV P+ +
Sbjct: 389 FSKR-GNVLFSSSLDGSVRAW-------DLIRYRNFRT--FTAPSRVQFSCIAVDPSGEI 438
Query: 395 VCTGSQDRTAC-VWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 453
VC GSQD +W + + T GH+ + S+ F+ ++ + S DKT++IW I
Sbjct: 439 VCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFS 498
Query: 454 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHED 507
S + S VL +F G ++ DG + W V+ G+ + D +D
Sbjct: 499 RSGIVEPLPIPSDVLSLAFHPDGKEVCVASLDGQLTFWNVQEGKQTSLIDGRKD 552
Score = 149 (57.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 41/159 (25%), Positives = 69/159 (43%)
Query: 382 DINSLAVAPNDSLVCTGSQDR-TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 440
+I++L V + GS VW V+ + H + ++++S Q +IT
Sbjct: 298 NIDTLTVNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITG 357
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 500
+ D IK+W ++ G C+ TF HTS+V F RG + S DG V+ W +
Sbjct: 358 ADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFR 417
Query: 501 TYDKHED-KIWALAVGKKTEMFATGGSDAL-VNLWHDST 537
T+ + +AV E+ G D+ + +W T
Sbjct: 418 TFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQT 456
Score = 148 (57.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 36/158 (22%), Positives = 72/158 (45%)
Query: 378 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 437
+H +++L + + + TG+ D VW + +VTF H + + FS V+
Sbjct: 337 SHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVL 396
Query: 438 ITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGL-VKLWTVRT 495
++S D +++ W + +TF + + +IV G+ D + +W+V+T
Sbjct: 397 FSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQT 456
Query: 496 GECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
G+ + T HE + +L+ + A+G D V +W
Sbjct: 457 GQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIW 494
Score = 140 (54.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 58/273 (21%), Positives = 110/273 (40%)
Query: 280 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-----RCCVGVGTGHMGAVGAVA 334
GH + ++ + A S + I T SKD + RL + C + TGH V +
Sbjct: 144 GHFDDIVSISWSADS--RFFIST-SKDLTARLHSVDPIEGFHPCAL---TGHKNTVVSGF 197
Query: 335 FSKKLQNFLVSGSSDHTIKVWSFDGL-------SDDAEQPMN------LKAKAVVAAHGK 381
FSK Q + + S D + VW + L ++AE+ +K + + K
Sbjct: 198 FSKDQQT-IYTVSKDGALFVWKYSPLFQAGEVIDEEAEENKTRTHIWLIKERHYFNQNSK 256
Query: 382 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV-DQVVITA 440
+ A P +L+ G ++ LP + + I ++ + D + I +
Sbjct: 257 -LRCAAFHPTSNLLVVGFSSGLFGIYELPSFTMLYQLSITQSNIDTLTVNSTGDWIAIGS 315
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 500
S + +W S + + H ++ + + G +I++ DG +K+W + +G CI
Sbjct: 316 SKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIV 375
Query: 501 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T+ +H + L K+ + + D V W
Sbjct: 376 TFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAW 408
Score = 135 (52.6 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 11 KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 70
++LVW+ + H +S++ + D + + +G+DD ++VWD+ + C+ T
Sbjct: 320 QLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQR--IITGADDGKIKVWDMNSGFCIVTF 377
Query: 71 DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC-AIPP 126
+H S V+ + + G+ L S+ D V WDL Y T V+ C A+ P
Sbjct: 378 TQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDP 434
Score = 132 (51.5 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 11 KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 70
++ +W V G GH+G VSS+ F+ + SLL SGS D TVR+WD+ ++ +
Sbjct: 448 EIFMWSVQTGQLLETLAGHEGPVSSLSFN--SSGSLLASGSWDKTVRIWDIFSRSGIVEP 505
Query: 71 DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 105
S V S+A DG + A D + W++++
Sbjct: 506 LPIPSDVLSLAFHPDGKEVCVASLDGQLTFWNVQE 540
Score = 128 (50.1 bits), Expect = 0.00023, P = 0.00023
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 LLEGADR-KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ GAD K+ VWD++ GFC F H VS + F ++LFS S D +VR WDL+
Sbjct: 354 IITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCF--SKRGNVLFSSSLDGSVRAWDLI 411
Query: 63 AKKCVATLDKHFSRVTSMAITSDGS-TLISAG-RDKV-VNLWDLR 104
+ T SRV I D S ++ AG +D + +W ++
Sbjct: 412 RYRNFRTFTAP-SRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQ 455
Score = 49 (22.3 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 23/86 (26%), Positives = 38/86 (44%)
Query: 24 HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW---DLLAKKCVA--TLDK----HF 74
HYF K V +I F P+ F+ S ++VW + L ++ A L + HF
Sbjct: 91 HYFN-FKSPVGAIEFSPN---GKFFAVSLGKLIQVWRTPNSLEEREFAPFVLHREYTGHF 146
Query: 75 SRVTSMAITSDGSTLISAGRDKVVNL 100
+ S++ ++D IS +D L
Sbjct: 147 DDIVSISWSADSRFFISTSKDLTARL 172
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 246 (91.7 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 97/406 (23%), Positives = 167/406 (41%)
Query: 144 KKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSD-VTISFEMDDS---KRGFTAATVL 199
++RR L+ +GE I + D +Q+ D T E DS R + A L
Sbjct: 157 ERRRRLKELLAGLGENAINKRQYEDEERKQQQREQDQATWYHEGPDSLRIARLWLADYSL 216
Query: 200 PSNQGLLCVTADQQLLLYTT------VEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQ 253
P + L V A + L + + VE+ +K L VG + F E+
Sbjct: 217 PRAKDRL-VRAREALEVPSAARAGRMVEMQKKLQSLAPLCSQVGDTRPVSSAAF-SEDSS 274
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV--LCL--DTCALSSGKILIVTGSKDNSV 309
L ++ +++ + L GH+ V + L A + + +G D +V
Sbjct: 275 LLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAV 334
Query: 310 RLWDSESRCCVGVGTGHMG-AVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 368
+LW + + TGHM V VAF FL + D + ++W D EQ
Sbjct: 335 KLWGFNNEESIADITGHMPHRVSKVAFHPS-GRFLATACYDSSWRLW-------DLEQKT 386
Query: 369 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 428
+ + H K ++ L+ + S++ TG D VW L ++ GH ++ V
Sbjct: 387 EVLHQE---GHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGV 443
Query: 429 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR-GAQIVSCGADGL 487
+FSP + T S D T KIW + + T HT+ + + G+ +V+C D
Sbjct: 444 DFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDST 503
Query: 488 VKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
K+W+ +T + + T H++K+ ++ + ++ AT D LW
Sbjct: 504 TKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLW 549
Score = 197 (74.4 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 61/200 (30%), Positives = 92/200 (46%)
Query: 253 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 312
++LA A +++DL + GH++ V CL S G +L VTG D R+W
Sbjct: 366 RFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYH--SDGSVL-VTGGLDAFGRVW 422
Query: 313 DSESRCCVGVGTGHMGAVGAVAFSKKLQNF-LVSGSSDHTIKVWSFDGLSDDAEQPMNLK 371
D + C+ GH+GAV V FS F + +GS D+T K+W QP+
Sbjct: 423 DLRTGRCIMFLEGHLGAVFGVDFSPN--GFHIATGSQDNTCKIWDLR-----RRQPVY-- 473
Query: 372 AKAVVAAHGKDINSLAVAPN-DSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 430
+ AH I+ + S + T S D T +W + T +GH + SV+
Sbjct: 474 ---TIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDI 530
Query: 431 SPVDQVVITASGDKTIKIWS 450
+P Q + T S D+T K+WS
Sbjct: 531 APNSQYIATTSFDRTFKLWS 550
Score = 187 (70.9 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 57/258 (22%), Positives = 102/258 (39%)
Query: 288 LDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL----QNF- 342
+ + A S L++T S +LW GH VG VA + +N
Sbjct: 264 VSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVV 323
Query: 343 -LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD-INSLAVAPNDSLVCTGSQ 400
+ SG D +K+W F+ N ++ A + H ++ +A P+ + T
Sbjct: 324 AMASGGHDGAVKLWGFN----------NEESIADITGHMPHRVSKVAFHPSGRFLATACY 373
Query: 401 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 460
D + +W L V+ GH + + + + V++T D ++W + G C+
Sbjct: 374 DSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFL 433
Query: 461 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 520
EGH +V F G I + D K+W +R + + T H + I + ++
Sbjct: 434 EGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGS 493
Query: 521 F-ATGGSDALVNLWHDST 537
F T D+ +W + T
Sbjct: 494 FLVTCSYDSTTKIWSNKT 511
Score = 178 (67.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 60/199 (30%), Positives = 83/199 (41%)
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
SG+ L T D+S RLWD E + V GH V +++ + LV+G D +V
Sbjct: 364 SGRFL-ATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSD-GSVLVTGGLDAFGRV 421
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 414
W M L+ + A G D + PN + TGSQD T +W L
Sbjct: 422 WDLR----TGRCIMFLEGH-LGAVFGVDFS-----PNGFHIATGSQDNTCKIWDLRRRQP 471
Query: 415 VVTFRGHKRGIWSVEFSP-VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
V T H I V++ ++T S D T KIWS LKT +GH + V+
Sbjct: 472 VYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIA 531
Query: 474 TRGAQIVSCGADGLVKLWT 492
I + D KLW+
Sbjct: 532 PNSQYIATTSFDRTFKLWS 550
Score = 135 (52.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 14 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 73
+WD++ + +GH V + +H +D S+L +G DA RVWDL +C+ L+ H
Sbjct: 379 LWDLEQKTEVLHQEGHAKPVHCLSYH--SDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGH 436
Query: 74 FSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY 115
V + + +G + + +D +WDLR T+P +
Sbjct: 437 LGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAH 478
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 32/125 (25%), Positives = 58/125 (46%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D VWD+ G C + +GH G V + F P+ + +GS D T ++WDL ++
Sbjct: 414 GLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFH--IATGSQDNTCKIWDLRRRQP 471
Query: 67 VATLDKHFSRVTSMAITSD-GSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIP 125
V T+ H + ++ + + GS L++ D +W + + T+ ++ I
Sbjct: 472 VYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIA 531
Query: 126 PGSAF 130
P S +
Sbjct: 532 PNSQY 536
Score = 118 (46.6 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 33/103 (32%), Positives = 46/103 (44%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGV-VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 65
G D V +W + GH VS + FHP L + D++ R+WDL K
Sbjct: 329 GHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSG--RFLATACYDSSWRLWDLEQKT 386
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 108
V + H V ++ SDGS L++ G D +WDLR C
Sbjct: 387 EVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRC 429
Score = 88 (36.0 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 25/96 (26%), Positives = 40/96 (41%)
Query: 14 VWDVDGGFCTHYFKGHKGVVSSILFHP----DTDKSL-LFSGSDDATVRVWDLLAKKCVA 68
+W V +GH V + P D + + + SG D V++W ++ +A
Sbjct: 287 LWSVPDCELKQTLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIA 346
Query: 69 TLDKHFS-RVTSMAITSDGSTLISAGRDKVVNLWDL 103
+ H RV+ +A G L +A D LWDL
Sbjct: 347 DITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDL 382
Score = 81 (33.6 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 24/105 (22%), Positives = 49/105 (46%)
Query: 254 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 313
++A + +++DL Y + H+ ++ + G L VT S D++ ++W
Sbjct: 451 HIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKY-QQECGSFL-VTCSYDSTTKIWS 508
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
+++ + GH V +V + Q ++ + S D T K+WS D
Sbjct: 509 NKTWQPLKTLQGHDNKVISVDIAPNSQ-YIATTSFDRTFKLWSPD 552
Score = 61 (26.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 23/76 (30%), Positives = 34/76 (44%)
Query: 33 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA----ITSDGST 88
VSS F D+ SLL + S ++W + + TL H S V +A + +D
Sbjct: 264 VSSAAFSEDS--SLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKADEEN 321
Query: 89 LI---SAGRDKVVNLW 101
++ S G D V LW
Sbjct: 322 VVAMASGGHDGAVKLW 337
Score = 58 (25.5 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 77 VTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFD 131
V+S A + D S L+++ + LW + D K T+ + A+ PG D
Sbjct: 264 VSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKAD 318
Score = 57 (25.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 18/75 (24%), Positives = 31/75 (41%)
Query: 242 ILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIV 301
I D+K+ E +L + +++ + L GH V+ +D S I
Sbjct: 482 ISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQ---YIA 538
Query: 302 TGSKDNSVRLWDSES 316
T S D + +LW +S
Sbjct: 539 TTSFDRTFKLWSPDS 553
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 217 (81.4 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 99/368 (26%), Positives = 167/368 (45%)
Query: 197 TVLPSNQG--LLCVTADQQ-LLLYTTVEVPEKKMELILSKRLVGY--NEEILDLKF-LGE 250
T++ +++G ++C+ D + L + + +P+K L L++ + + NEE+L F + +
Sbjct: 2 TMMDTDEGKTVMCLLTDPEGTHLGSAMYIPQKAGPLQLTQLVNRFLDNEEMLPYSFYVSD 61
Query: 251 EEQYLAVATNIEQ----VQ-----VYDLSSM-------SCSYVLAGHSEIVLCLDTCALS 294
EE + V T +E+ V+ VY ++ CS +AGH+E VLC+
Sbjct: 62 EELLVPVGTYLEKNKVSVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSP-- 119
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
GK L +GS D +VRLWD + + GH V VA+S ++ LVSGS I
Sbjct: 120 DGKQL-ASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKH-LVSGSKSGEICC 177
Query: 355 WSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
W+ + E P+ K + + ++ L+ +P V T S+D A +W +
Sbjct: 178 WN--PKKGELEGSPLTGHKKWITGISWEPVH-LS-SPCRRFV-TSSKDGDARIWDITLKK 232
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
S++ GH + V++ D ++ T S D TIK+W + G ++ +GH + +
Sbjct: 233 SIICLSGHTLAVTCVKWGG-DGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALS 291
Query: 474 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT-----EMFATGGSDA 528
T ++ GA TG Y +E+K AL KT E +G D
Sbjct: 292 TE--YVLRTGAFD-------HTGR---QYPPNEEKQKALERYNKTKGDSPERLVSGSDDF 339
Query: 529 LVNLWHDS 536
+ LW S
Sbjct: 340 TMFLWEPS 347
Score = 177 (67.4 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 48/189 (25%), Positives = 91/189 (48%)
Query: 347 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 406
S+++ ++ +FD + P N + + + + K +P + LV +GS D T +
Sbjct: 291 STEYVLRTGAFDHTG--RQYPPNEEKQKALERYNKTKGD---SP-ERLV-SGSDDFTMFL 343
Query: 407 WRLPDLVSVVTFR--GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
W P + R GH++ + V FSP + + +AS DK++++W+ G + F GH
Sbjct: 344 WE-PSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHV 402
Query: 465 SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 524
V + S+ ++S D +K+W +RT + H D+++A+ E +G
Sbjct: 403 GPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSG 462
Query: 525 GSDALVNLW 533
G D ++ LW
Sbjct: 463 GKDRVLKLW 471
Score = 160 (61.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 33/94 (35%), Positives = 54/94 (57%)
Query: 9 DRKVLVWD-VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
D+ V +W+ + G F T F+GH G V + + D LL SGS D+T+++W++ KK
Sbjct: 381 DKSVRLWNGITGQFVT-VFRGHVGPVYQVSW--SADSRLLLSGSKDSTLKIWEIRTKKLK 437
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
L H V ++ + DG ++S G+D+V+ LW
Sbjct: 438 QDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 126 (49.4 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 39/131 (29%), Positives = 61/131 (46%)
Query: 278 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 337
L GH ++V GK I + S D SVRLW+ + V V GH+G V V++S
Sbjct: 356 LTGHQQLVN--HVYFSPDGK-WIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA 412
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 397
L+SGS D T+K+W K K + H ++ ++ +P+ V +
Sbjct: 413 D-SRLLLSGSKDSTLKIWEI----------RTKKLKQDLPGHADEVFAVDWSPDGEKVVS 461
Query: 398 GSQDRTACVWR 408
G +DR +W+
Sbjct: 462 GGKDRVLKLWK 472
Score = 121 (47.7 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 48/196 (24%), Positives = 83/196 (42%)
Query: 343 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 402
+ +GS D TIK+W + + LK HG INSLA++ + ++ TG+ D
Sbjct: 255 IYTGSQDCTIKMWE----TTQGKLIRELKG------HGHWINSLALS-TEYVLRTGAFDH 303
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS-DGSCLKTFE 461
T + + R +K + SP + +++ S D T+ +W S K
Sbjct: 304 TGRQYPPNEEKQKALERYNK----TKGDSP--ERLVSGSDDFTMFLWEPSVSKQPKKRLT 357
Query: 462 GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 521
GH V F G I S D V+LW TG+ + + H ++ ++ + +
Sbjct: 358 GHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLL 417
Query: 522 ATGGSDALVNLWHDST 537
+G D+ + +W T
Sbjct: 418 LSGSKDSTLKIWEIRT 433
Score = 117 (46.2 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
C+ GH V + F PD + L SGS D TVR+WDL + + T H + V ++A
Sbjct: 101 CSQTIAGHAEAVLCVSFSPDGKQ--LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVA 158
Query: 82 ITSDGSTLISAGRDKVVNLWD 102
+ DG L+S + + W+
Sbjct: 159 WSPDGKHLVSGSKSGEICCWN 179
Score = 86 (35.3 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 28 GHKGVVSSILFHP---DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 84
GHK ++ I + P + + S D R+WD+ KK + L H VT +
Sbjct: 192 GHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGG 251
Query: 85 DGSTLISAGRDKVVNLWD 102
DG + + +D + +W+
Sbjct: 252 DG-IIYTGSQDCTIKMWE 268
Score = 80 (33.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 17/77 (22%), Positives = 37/77 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D +WD+ GH V+ + + D ++++GS D T+++W+ K +
Sbjct: 220 DGDARIWDITLKKSIICLSGHTLAVTCVKWGGD---GIIYTGSQDCTIKMWETTQGKLIR 276
Query: 69 TLDKHFSRVTSMAITSD 85
L H + S+A++++
Sbjct: 277 ELKGHGHWINSLALSTE 293
Score = 70 (29.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
+C T+ H V ++ + DG L S D V LWDL
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL 138
Score = 68 (29.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L G+ D V +WD+ KGHK V ++ + PD K L+ SGS + W+
Sbjct: 124 LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD-GKHLV-SGSKSGEICCWNPK 181
Query: 63 AKKCVAT-LDKHFSRVTSMA-----ITSDGSTLISAGRDKVVNLWDL 103
+ + L H +T ++ ++S +++ +D +WD+
Sbjct: 182 KGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDI 228
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 220 (82.5 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 63/224 (28%), Positives = 103/224 (45%)
Query: 314 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 373
SE+ G GH G V +A + K + ++S S D T+ VW L+ D + K
Sbjct: 2 SETLQLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWK---LTRDEDTNYGYPQK 58
Query: 374 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 433
+ H I+ + ++ + + +GS D+T +W L + F GH + + SV FS
Sbjct: 59 RLYG-HSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSAD 117
Query: 434 DQVVITASGDKTIKIWSISDGSCLKTFE--GHTSSVLRASFLTRGAQ--IVSCGADGLVK 489
++ +++ S DKTIK+W+ C T + GHT V F + IVSCG D VK
Sbjct: 118 NRQIVSGSRDKTIKLWNTL-AECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVK 176
Query: 490 LWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+W + + + H + + V + +GG D+ LW
Sbjct: 177 VWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLW 220
Score = 212 (79.7 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 69/231 (29%), Positives = 114/231 (49%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
KRL G++ I D+ L + Y + + ++++DL++ + GH++ VL + A
Sbjct: 58 KRLYGHSHFISDV-VLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSV---A 113
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGT-GHMGAVGAVAFSKKLQN-FLVSGSSDH 350
S+ IV+GS+D +++LW++ + C + GH V V FS N +VS D
Sbjct: 114 FSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDR 173
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
T+KVW+ N K K H +N++ V+P+ SL +G +D A +W L
Sbjct: 174 TVKVWNL----------ANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLN 223
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE 461
D ++ T H I ++ FSP + A G +IKIW ++ C KT E
Sbjct: 224 DGKNLYTLE-HNDIINALCFSPNRYWLCVAYGP-SIKIWDLA---CKKTVE 269
Score = 175 (66.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 55/222 (24%), Positives = 99/222 (44%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGT------GHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
I++ S+D ++ +W G GH + V S N+ +SGS D T++
Sbjct: 31 IISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSD-GNYALSGSWDQTLR 89
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR-LPDL 412
+W D A K H KD+ S+A + ++ + +GS+D+T +W L +
Sbjct: 90 LW------DLAAG----KTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAEC 139
Query: 413 VSVVTFRGHKRGIWSVEFSP--VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
+ GH + V FSP + ++++ D+T+K+W++++ GH +
Sbjct: 140 KFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTV 199
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 512
+ G+ S G D LW + G+ + T + H D I AL
Sbjct: 200 TVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINAL 240
Score = 174 (66.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 50/178 (28%), Positives = 77/178 (43%)
Query: 370 LKAKAVVAAHGKDINSLAVAPND-SLVCTGSQDRTACVWRLP-DLVSVVTFR-----GHK 422
L+ + + H + +A P D + + S+D+T VW+L D + + GH
Sbjct: 5 LQLRGTLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHS 64
Query: 423 RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSC 482
I V S ++ S D+T+++W ++ G + FEGHT VL +F QIVS
Sbjct: 65 HFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSG 124
Query: 483 GADGLVKLWTVRTGECIATY--DKHEDKIWALAV----GKKTEMFATGGSDALVNLWH 534
D +KLW EC T D H D W V + + G D V +W+
Sbjct: 125 SRDKTIKLWNT-LAECKFTIQEDGHTD--WVSCVRFSPNHSNPIIVSCGWDRTVKVWN 179
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 35/110 (31%), Positives = 56/110 (50%)
Query: 9 DRKVLVW------DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
D+ ++VW D + G+ GH +S ++ D + +L SGS D T+R+WDL
Sbjct: 37 DKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYAL--SGSWDQTLRLWDLA 94
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
A K + H V S+A ++D ++S RDK + LW+ CK T+
Sbjct: 95 AGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLA-ECKFTI 143
Score = 144 (55.7 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 37/113 (32%), Positives = 62/113 (54%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
+AL D+ + +WD+ G T F+GH V S+ F D + + SGS D T+++W+
Sbjct: 78 YALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQ--IVSGSRDKTIKLWNT 135
Query: 62 LAKKCVATL--DKHFSRVTSMAITSDGST--LISAGRDKVVNLWDLRDYSCKL 110
LA+ C T+ D H V+ + + + S ++S G D+ V +W+L + CKL
Sbjct: 136 LAE-CKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLAN--CKL 185
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/125 (27%), Positives = 59/125 (47%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFK--GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 60
++ G+ D+ + +W+ C + GH VS + F P+ ++ S D TV+VW+
Sbjct: 121 IVSGSRDKTIKLWNTLAE-CKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWN 179
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 120
L K H + ++ ++ DGS S G+D LWDL D T+ +++ A
Sbjct: 180 LANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINA 239
Query: 121 VCAIP 125
+C P
Sbjct: 240 LCFSP 244
Score = 120 (47.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 51/232 (21%), Positives = 102/232 (43%)
Query: 232 SKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLA--GHSEIVLCLD 289
++R G+ +++L + F + Q ++ + + + +++++ + C + + GH++ V C+
Sbjct: 99 TRRFEGHTKDVLSVAFSADNRQIVSGSRD-KTIKLWNTLA-ECKFTIQEDGHTDWVSCVR 156
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
S I++ G D +V++W+ + GH G + V S + SG D
Sbjct: 157 FSPNHSNPIIVSCGW-DRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPD-GSLCTSGGKD 214
Query: 350 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT--GSQDRT---A 404
+W + D + L+ H IN+L +PN +C G + A
Sbjct: 215 SKALLWDLN----DGKNLYTLE-------HNDIINALCFSPNRYWLCVAYGPSIKIWDLA 263
Query: 405 C---VWRL-PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 452
C V L P++VS T + + S+ +S Q + D TI++W +S
Sbjct: 264 CKKTVEELRPEVVSP-TSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQVS 314
Score = 64 (27.6 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 69 TLDKHFSRVTSMAIT-SDGSTLISAGRDKVVNLWDL-RD 105
TL H VT +A D T+ISA RDK + +W L RD
Sbjct: 10 TLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRD 48
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 158 (60.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 43/161 (26%), Positives = 73/161 (45%)
Query: 307 NSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQ 366
++++LWD + H+G V +V F Q VSG D+TIKVWS +
Sbjct: 33 STIQLWDYRMGTLIDRFEDHVGPVRSVDFHPT-QPLFVSGGDDYTIKVWSLN-------- 83
Query: 367 PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIW 426
K + H I ++ + + + S D+T +W + + GH +
Sbjct: 84 --TRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVM 141
Query: 427 SVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV 467
S +F P + ++++AS D+T+++W IS K TSSV
Sbjct: 142 SAQFHPSEDLIVSASLDQTVRVWDIS--GLRKKHSAPTSSV 180
Score = 157 (60.3 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
+AL+ + +WD G F+ H G V S+ FHP + L SG DD T++VW L
Sbjct: 25 WALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFHPT--QPLFVSGGDDYTIKVWSL 82
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
+KC+ TL+ H + ++ D +IS D+ + +W+
Sbjct: 83 NTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWN 123
Score = 149 (57.5 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 44/185 (23%), Positives = 78/185 (42%)
Query: 340 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGS 399
++ +VS S D T++VW GL P + V A + + D G+
Sbjct: 149 EDLIVSASLDQTVRVWDISGLRKKHSAPTSS-----VRAFEDQLQRQQLPQQDIF---GN 200
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--L 457
+ +V V GH +G+ F P ++++A D+ +K+W +SD +
Sbjct: 201 ---------INAVVKYV-LEGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEV 250
Query: 458 KTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 517
T GHT +VL A F I+S D +++W + + + + D+ W +A
Sbjct: 251 DTCRGHTGNVLSAIFHPHQDLILSVSDDKTIRVWDLNKRVPVKQFRREHDRFWLIASHPT 310
Query: 518 TEMFA 522
+FA
Sbjct: 311 ISLFA 315
Score = 147 (56.8 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 31/127 (24%), Positives = 56/127 (44%)
Query: 407 WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 466
+R+ L+ F H + SV+F P + ++ D TIK+WS++ C+ T GH
Sbjct: 40 YRMGTLID--RFEDHVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDY 97
Query: 467 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 526
+ SF I+SC D +++W + + IA H + + ++ +
Sbjct: 98 IRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASL 157
Query: 527 DALVNLW 533
D V +W
Sbjct: 158 DQTVRVW 164
Score = 139 (54.0 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 36/124 (29%), Positives = 58/124 (46%)
Query: 368 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHKRGI 425
+N K V+ H K +N + P L+ + DR +WR+ D + V T RGH +
Sbjct: 201 INAVVKYVLEGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNV 260
Query: 426 WSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG-HTSSVLRASFLTRGAQIVSCGA 484
S F P ++++ S DKTI++W ++ +K F H L AS T +C
Sbjct: 261 LSAIFHPHQDLILSVSDDKTIRVWDLNKRVPVKQFRREHDRFWLIASHPTISL-FAACHD 319
Query: 485 DGLV 488
G++
Sbjct: 320 SGIM 323
Score = 136 (52.9 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 31/108 (28%), Positives = 49/108 (45%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D + VW ++ C GH + + FH D + S SDD T+R+W+ ++
Sbjct: 72 GDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLP--WIISCSDDQTIRIWNWQNRQE 129
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT 114
+A L H V S ++SA D+ V +WD+ K + PT
Sbjct: 130 IACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDISGLRKKHSAPT 177
Score = 134 (52.2 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 39/151 (25%), Positives = 61/151 (40%)
Query: 346 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAA---HGKDINSLAVAPNDSLVCTGSQDR 402
G + H + W+ L Q + + ++ H + S+ P L +G D
Sbjct: 16 GVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQPLFVSGGDDY 75
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
T VW L + T GH I V F +I+ S D+TI+IW+ + + G
Sbjct: 76 TIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTG 135
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTV 493
H V+ A F IVS D V++W +
Sbjct: 136 HNHYVMSAQFHPSEDLIVSASLDQTVRVWDI 166
Score = 129 (50.5 bits), Expect = 0.00028, P = 0.00028
Identities = 30/114 (26%), Positives = 56/114 (49%)
Query: 299 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
L V+G D ++++W +R C+ GH+ + V+F L +++S S D TI++W++
Sbjct: 67 LFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLP-WIISCSDDQTIRIWNWQ 125
Query: 359 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
N + A + H + S P++ L+ + S D+T VW + L
Sbjct: 126 ----------NRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDISGL 169
Score = 116 (45.9 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 27/104 (25%), Positives = 52/104 (50%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+ L++ C + L GH + + + + I++ S D ++R+W+ ++R +
Sbjct: 77 IKVWSLNTRKCIFTLNGHLDYIRGV---SFHHDLPWIISCSDDQTIRIWNWQNRQEIACL 133
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 367
TGH V + F ++ +VS S D T++VW GL P
Sbjct: 134 TGHNHYVMSAQFHPS-EDLIVSASLDQTVRVWDISGLRKKHSAP 176
Score = 107 (42.7 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 48/203 (23%), Positives = 78/203 (38%)
Query: 399 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
S D+T +W + + GH + S +F P + ++++AS D+T+++W IS K
Sbjct: 114 SDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDIS--GLRK 171
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 518
TSSV + Q+ G + V+ + H+ + +
Sbjct: 172 KHSAPTSSVRAFEDQLQRQQLPQQDIFGNINA-VVKY-----VLEGHDKGVNYASFHPTL 225
Query: 519 EMFATGGSDALVNLWHDS-TXXXXXXXXXXXXXXVLRG-----QELENAVLDA------D 566
+ + G D +V LW S T VL Q+L +V D D
Sbjct: 226 PLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQDLILSVSDDKTIRVWD 285
Query: 567 YTKAIQVAFELRRPHKLFELFAS 589
K + V + RR H F L AS
Sbjct: 286 LNKRVPVK-QFRREHDRFWLIAS 307
Score = 88 (36.0 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 261 IEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRCC 319
+ Q ++ + YVL GH + V + + LIV+ D V+LW S+++
Sbjct: 192 LPQQDIFGNINAVVKYVLEGHDKGV---NYASFHPTLPLIVSAGDDRVVKLWRMSDTKAW 248
Query: 320 -VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 358
V GH G V + F Q+ ++S S D TI+VW +
Sbjct: 249 EVDTCRGHTGNVLSAIFHPH-QDLILSVSDDKTIRVWDLN 287
Score = 80 (33.2 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 19/87 (21%), Positives = 34/87 (39%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
F+ + FHP +L+ S +T+++WD + + H V S+
Sbjct: 7 FESKSSRAKGVAFHPKRPWALVSLHS--STIQLWDYRMGTLIDRFEDHVGPVRSVDFHPT 64
Query: 86 GSTLISAGRDKVVNLWDLRDYSCKLTV 112
+S G D + +W L C T+
Sbjct: 65 QPLFVSGGDDYTIKVWSLNTRKCIFTL 91
Score = 47 (21.6 bits), Expect = 5.9e-07, Sum P(3) = 5.9e-07
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 332 AVAFSKKLQNFL-VSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGK-DINSLAVA 389
A+ S K +N+ S ++ +K+ + G AEQ M LK KA A+ +IN A
Sbjct: 1108 AMTQSFKNKNYASASYFAEELLKISNNSG--PRAEQAMKLKNKADTIANDTIEINFDPFA 1165
Query: 390 PNDSLVCTGS 399
D +C GS
Sbjct: 1166 EFD--ICCGS 1173
Score = 46 (21.3 bits), Expect = 5.9e-07, Sum P(3) = 5.9e-07
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 299 LIVTGSKDNSVRLWDSESR 317
LI++ S D ++R+WD R
Sbjct: 271 LILSVSDDKTIRVWDLNKR 289
>SGD|S000001696 [details] [associations]
symbol:DOA1 "WD repeat protein required for
ubiquitin-mediated protein degradation" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IMP;IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50176 PROSITE:PS50294
SMART:SM00320 SGD:S000001696 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006944 GO:GO:0006511
GO:GO:0043130 GO:GO:0006303 EMBL:X75951 EMBL:U39947 EMBL:Z28213
PIR:S38051 RefSeq:NP_012709.1 PDB:3GAE PDB:3L3F PDB:3ODT PDB:3PSP
PDB:3PST PDBsum:3GAE PDBsum:3L3F PDBsum:3ODT PDBsum:3PSP
PDBsum:3PST ProteinModelPortal:P36037 SMR:P36037 DIP:DIP-6274N
IntAct:P36037 MINT:MINT-606421 STRING:P36037 PaxDb:P36037
PeptideAtlas:P36037 EnsemblFungi:YKL213C GeneID:853667
KEGG:sce:YKL213C CYGD:YKL213c GeneTree:ENSGT00550000074944
HOGENOM:HOG000174247 KO:K14018 OMA:HESFVYC OrthoDB:EOG4MGWGM
EvolutionaryTrace:P36037 NextBio:974605 Genevestigator:P36037
GermOnline:YKL213C InterPro:IPR015155 InterPro:IPR013535
Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396
Uniprot:P36037
Length = 715
Score = 247 (92.0 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 72/249 (28%), Positives = 118/249 (47%)
Query: 289 DTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAFSKKLQNFLVSGS 347
D A+ K+ V S+D +VRLW + + V TG G + +V + + + L+ G
Sbjct: 18 DVVAVDDSKVASV--SRDGTVRLWSKDDQWLGTVVYTGQ-GFLNSVCYDSE-KELLLFGG 73
Query: 348 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 407
D I + E P+ + H ++ SL+ D +V +GS D+TA VW
Sbjct: 74 KDTMIN--GVPLFATSGEDPLY-----TLIGHQGNVCSLSF--QDGVVISGSWDKTAKVW 124
Query: 408 RLPDLVSVVTFRGHKRGIWS---VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 464
+ LV + H +W V FS + +TAS DKTIK+W + +KTF G
Sbjct: 125 KEGSLV--YNLQAHNASVWDAKVVSFS--ENKFLTASADKTIKLWQ--NDKVIKTFSGIH 178
Query: 465 SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 524
+ V+R + +SC DGL+KL + TG+ + TY+ HE ++ + + ++ + G
Sbjct: 179 NDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCG 238
Query: 525 GSDALVNLW 533
D V +W
Sbjct: 239 -EDRTVRIW 246
Score = 160 (61.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 60/209 (28%), Positives = 91/209 (43%)
Query: 327 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI-NS 385
+G G V ++SGS D T KVW L NL+A H + ++
Sbjct: 96 IGHQGNVCSLSFQDGVVISGSWDKTAKVWKEGSLV------YNLQA------HNASVWDA 143
Query: 386 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQV-VITASGDK 444
V+ +++ T S D+T +W+ D V + TF G + + VD I+ S D
Sbjct: 144 KVVSFSENKFLTASADKTIKLWQ-NDKV-IKTFSGIHNDVVR-HLAVVDDGHFISCSNDG 200
Query: 445 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 504
IK+ + G L+T+EGH S V L G IVSCG D V++W+ G
Sbjct: 201 LIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITL 259
Query: 505 HEDKIWALAVGKKTEMFATGGSDALVNLW 533
IW++ ++ G SD LV ++
Sbjct: 260 PAISIWSVDCMSNGDIIV-GSSDNLVRIF 287
Score = 127 (49.8 bits), Expect = 0.00023, P = 0.00023
Identities = 43/174 (24%), Positives = 74/174 (42%)
Query: 368 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL-VSVVTFRGHKRGIW 426
M + A + H +D+ + VA +DS V + S+D T +W D + V + G +G
Sbjct: 1 MGYQLSATLKGHDQDVRDV-VAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTG--QGFL 57
Query: 427 -SVEFSPVDQVVITASGDKTIK---IWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSC 482
SV + ++++ D I +++ S L T GH +V SF + ++S
Sbjct: 58 NSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISG 115
Query: 483 GADGLVKLWTVRTGECIATYDKHEDKIW-ALAVGKKTEMFATGGSDALVNLWHD 535
D K+W + G + H +W A V F T +D + LW +
Sbjct: 116 SWDKTAKVW--KEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN 167
Score = 55 (24.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 19/73 (26%), Positives = 32/73 (43%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 86
KGH V ++ D S + S S D TVR+W + + + S+ S+
Sbjct: 10 KGHDQDVRDVVA---VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEK 66
Query: 87 STLISAGRDKVVN 99
L+ G+D ++N
Sbjct: 67 ELLLFGGKDTMIN 79
Score = 54 (24.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 18/56 (32%), Positives = 24/56 (42%)
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVC 122
ATL H V + + D S + S RD V LW D V T + + +VC
Sbjct: 7 ATLKGHDQDVRDV-VAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVC 61
Score = 37 (18.1 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 155 TVGERGIVRMWNADSACL 172
+V G VR+W+ D L
Sbjct: 29 SVSRDGTVRLWSKDDQWL 46
>CGD|CAL0002120 [details] [associations]
symbol:orf19.3862 species:5476 "Candida albicans" [GO:0010008
"endosome membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA] [GO:0031932
"TORC2 complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031234 "extrinsic to internal side of plasma membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0001558 "regulation
of cell growth" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0031929 "TOR signaling cascade" evidence=IEA] [GO:0031505
"fungal-type cell wall organization" evidence=IEA] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IEA] [GO:0030950
"establishment or maintenance of actin cytoskeleton polarity"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0030295 "protein kinase activator activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0002120 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000125
EMBL:AACQ01000124 KO:K08266 HOGENOM:HOG000208395 RefSeq:XP_441049.1
RefSeq:XP_713529.1 ProteinModelPortal:Q59V90 STRING:Q59V90
GeneID:3644824 GeneID:6335359 KEGG:cal:CaO19.11343
KEGG:cal:CaO19.3862 Uniprot:Q59V90
Length = 328
Score = 189 (71.6 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 62/213 (29%), Positives = 93/213 (43%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+VT S+D +V++WD S V H V V Q L+S D I+VW
Sbjct: 115 MVTSSEDGTVKVWDVRSPS-VQRNYKHQCPVNEVVIHPN-QGELISCDQDGNIRVW---- 168
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD------LV 413
D E N ++ INSL+VA + S++ G+ VW++ + L
Sbjct: 169 --DLGE---NSCTHHLIPEDDVPINSLSVASDGSMLVAGNNKGNCYVWKMQNQRDATVLT 223
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT-FEGHTSSVLRASF 472
V FR H + I V S + + T S D T +IWS L+T +GH V +F
Sbjct: 224 PVTKFRSHSKYITRVLLSTDMKHLATCSADHTARIWSTEQNFNLETTLQGHQRWVWDCAF 283
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKH 505
A +V+ +D V+LW + E + Y+ H
Sbjct: 284 SADSAYLVTACSDHYVRLWDLSNSETVRQYNGH 316
Score = 156 (60.0 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 46/230 (20%), Positives = 104/230 (45%)
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLC-LDTCALSS 295
G+ + L+F + + ++ ++ V+V+D+ S S V + C ++ +
Sbjct: 98 GHKNNVTSLQFQADNK-WMVTSSEDGTVKVWDVRSPS---VQRNYKH--QCPVNEVVIHP 151
Query: 296 GKILIVTGSKDNSVRLWD-SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
+ +++ +D ++R+WD E+ C + + +++ + + LV+G++ V
Sbjct: 152 NQGELISCDQDGNIRVWDLGENSCTHHLIPEDDVPINSLSVASD-GSMLVAGNNKGNCYV 210
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 414
W D K ++ H K I + ++ + + T S D TA +W +
Sbjct: 211 WKMQNQRDATVLTPVTKFRS----HSKYITRVLLSTDMKHLATCSADHTARIWSTEQNFN 266
Query: 415 V-VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGH 463
+ T +GH+R +W FS ++TA D +++W +S+ ++ + GH
Sbjct: 267 LETTLQGHQRWVWDCAFSADSAYLVTACSDHYVRLWDLSNSETVRQYNGH 316
Score = 146 (56.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 51/208 (24%), Positives = 90/208 (43%)
Query: 343 LVSGSSDHTIKVW-SFDGL-SDDAEQP---MN-LKA---KAVVAAHGK------DINSLA 387
L S DHTI+ W + G+ S + P +N L+ K +AA G DI
Sbjct: 5 LASAGYDHTIRFWDALTGVCSRTIQHPESQVNRLEITSDKRFLAAAGNLYVKLYDIRQTG 64
Query: 388 VAPNDSLVCTGSQDRTACV-WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTI 446
+ N + T + T+ + V+TF GHK + S++F ++ ++T+S D T+
Sbjct: 65 NSGNGANGTTNTSASTSSSNQNNSNNNPVMTFEGHKNNVTSLQFQADNKWMVTSSEDGTV 124
Query: 447 KIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 506
K+W + S + ++ H V +++SC DG +++W + C +
Sbjct: 125 KVWDVRSPSVQRNYK-HQCPVNEVVIHPNQGELISCDQDGNIRVWDLGENSCTHHLIPED 183
Query: 507 D-KIWALAVGKKTEMFATGGSDALVNLW 533
D I +L+V M G + +W
Sbjct: 184 DVPINSLSVASDGSMLVAGNNKGNCYVW 211
Score = 123 (48.4 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
F+GHK V+S+ F D +K ++ S S+D TV+VWD+ + V KH V + I +
Sbjct: 96 FEGHKNNVTSLQFQAD-NKWMVTS-SEDGTVKVWDVRSPS-VQRNYKHQCPVNEVVIHPN 152
Query: 86 GSTLISAGRDKVVNLWDLRDYSC 108
LIS +D + +WDL + SC
Sbjct: 153 QGELISCDQDGNIRVWDLGENSC 175
Score = 121 (47.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 48/217 (22%), Positives = 82/217 (37%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH V ++ F ++V+ S D T+KVW D S ++ N K H +N
Sbjct: 98 GHKNNVTSLQFQAD-NKWMVTSSEDGTVKVW--DVRSPSVQR--NYK-------HQCPVN 145
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPD-LVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
+ + PN + + QD VW L + + I S+ + +++ +
Sbjct: 146 EVVIHPNQGELISCDQDGNIRVWDLGENSCTHHLIPEDDVPINSLSVASDGSMLVAGNNK 205
Query: 444 KTIKIWSIS---DGSCLKT---FEGHTSSVLRASFLTRGAQIVSCGADGLVKLW-TVRTG 496
+W + D + L F H+ + R T + +C AD ++W T +
Sbjct: 206 GNCYVWKMQNQRDATVLTPVTKFRSHSKYITRVLLSTDMKHLATCSADHTARIWSTEQNF 265
Query: 497 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
T H+ +W A + T SD V LW
Sbjct: 266 NLETTLQGHQRWVWDCAFSADSAYLVTACSDHYVRLW 302
Score = 116 (45.9 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 38/176 (21%), Positives = 81/176 (46%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+DL SC++ L ++ + ++ +++S ++V G+ + +W +++ V
Sbjct: 165 IRVWDLGENSCTHHLIPEDDVPI--NSLSVASDGSMLVAGNNKGNCYVWKMQNQRDATVL 222
Query: 324 T------GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA 377
T H + V S +++ L + S+DHT ++WS EQ NL+ +
Sbjct: 223 TPVTKFRSHSKYITRVLLSTDMKH-LATCSADHTARIWS-------TEQNFNLET--TLQ 272
Query: 378 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 433
H + + A + + + + T D +W L + +V + GH +G V + V
Sbjct: 273 GHQRWVWDCAFSADSAYLVTACSDHYVRLWDLSNSETVRQYNGHHKGAVCVALNDV 328
Score = 93 (37.8 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 46 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+L S D T+R WD L C T+ S+V + ITSD L +AG + V L+D+R
Sbjct: 4 ILASAGYDHTIRFWDALTGVCSRTIQHPESQVNRLEITSDKRFLAAAG-NLYVKLYDIR 61
Score = 83 (34.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 46/181 (25%), Positives = 75/181 (41%)
Query: 154 ITVGERGIVRMWN-ADSACLYEQ-KSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTAD 211
I+ + G +R+W+ +++C + DV I+ + + G + V +N+G C
Sbjct: 157 ISCDQDGNIRVWDLGENSCTHHLIPEDDVPIN-SLSVASDG--SMLVAGNNKGN-CYVWK 212
Query: 212 QQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS- 270
Q TV P K SK Y +L L + ++LA + +++
Sbjct: 213 MQNQRDATVLTPVTKFRSH-SK----YITRVL----LSTDMKHLATCSADHTARIWSTEQ 263
Query: 271 SMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGH-MGA 329
+ + L GH V CA S+ +VT D+ VRLWD + V GH GA
Sbjct: 264 NFNLETTLQGHQRWVW---DCAFSADSAYLVTACSDHYVRLWDLSNSETVRQYNGHHKGA 320
Query: 330 V 330
V
Sbjct: 321 V 321
Score = 82 (33.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 32/160 (20%), Positives = 63/160 (39%)
Query: 338 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA--AHGKDINSLAVAPNDSLV 395
KL + +G+S + + S + N V+ H ++ SL ++ +
Sbjct: 56 KLYDIRQTGNSGNGANGTTNTSASTSSSNQNNSNNNPVMTFEGHKNNVTSLQFQADNKWM 115
Query: 396 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 455
T S+D T VW + SV H+ + V P +I+ D I++W + + S
Sbjct: 116 VTSSEDGTVKVWDVRS-PSVQRNYKHQCPVNEVVIHPNQGELISCDQDGNIRVWDLGENS 174
Query: 456 CLKTFEGHTSSVLRA-SFLTRGAQIVSCGADGLVKLWTVR 494
C + + S + G+ +V+ G +W ++
Sbjct: 175 CTHHLIPEDDVPINSLSVASDGSMLVAGNNKGNCYVWKMQ 214
Score = 46 (21.3 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 89 LISAGRDKVVNLWDLRDYSCKLTV 112
L SAG D + WD C T+
Sbjct: 5 LASAGYDHTIRFWDALTGVCSRTI 28
Score = 42 (19.8 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
G D + WD G C+ + + V+ + +DK L + + + V+++D+
Sbjct: 9 GYDHTIRFWDALTGVCSRTIQHPESQVNRLEI--TSDKRFL-AAAGNLYVKLYDI 60
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 176 (67.0 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 70/296 (23%), Positives = 131/296 (44%)
Query: 211 DQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 270
D+ L ++ E EK +E+ + +E+L F +++++A + ++V++++
Sbjct: 637 DKTLQVFKA-ETGEKLLEI------KAHEDEVLCCAF-STDDRFIATCSVDKKVKIWNSM 688
Query: 271 SMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAV 330
+ +V HSE V C +S +L+ T S D ++LWD + C GH +V
Sbjct: 689 TGGLVHVYDEHSEQVNCCHFTN-NSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSV 747
Query: 331 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 390
FS L S S+D T+K+W D S + + +N+K + + ++ + V
Sbjct: 748 NHCRFSPD-DKLLASCSADGTLKLW--DVKSANERKSINVKQFFLNSEEPQEDMEVIVK- 803
Query: 391 NDSLVCTGSQDRTACVWRLPD---LVSVVT-------FRGHKRGIWSVEFSPVDQVVITA 440
C+ S D T + + L + T GH I +FSP + + + A
Sbjct: 804 ----CCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVA 859
Query: 441 SGDKTIKIWSISDGSCLKTFE--GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
+++W++ SCLK + GH S V F G+ ++ D ++LW +
Sbjct: 860 LSQCCVELWNMD--SCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETK 913
Score = 175 (66.7 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 91/352 (25%), Positives = 151/352 (42%)
Query: 164 MWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVP 223
M++ D + + S D TI + K +A VL Q + V + ++++ +
Sbjct: 890 MFSPDGSS-FLTSSDDQTIRL-WETKKVCKNSAIVL--KQEIDVVFQENEVMVLAVDNI- 944
Query: 224 EKKMELILSKR-LVGYNEEI-LDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGH 281
K+++LI K + Y E + L QY+A V++ +L + GH
Sbjct: 945 -KRLQLINGKTGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGH 1003
Query: 282 SEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN 341
+ V + GK LI + S D+S+++W+ +S V + H V K +
Sbjct: 1004 KKTVRHIQFT--DDGKTLI-SSSDDSSIQVWNWQSEEYVFL-QAHQETVKDFKLLKNSK- 1058
Query: 342 FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQD 401
L+S S D T+K+WS ++ E+ H + S ++P+ + + S D
Sbjct: 1059 -LLSWSFDGTVKIWSI--ITGRIEKDF--------VCHQDTVLSCDISPDATKFSSTSAD 1107
Query: 402 RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKT 459
+TA +W L + RGHK + FS VD ++ A+GD I+IW++S+G L
Sbjct: 1108 KTAKIWSFELLSPLHELRGHKGCVRCSVFS-VDSTLL-ATGDDNGEIRIWNVSNGELLHL 1165
Query: 460 F------EG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 502
EG H V F +VS G G +K W V TGE T+
Sbjct: 1166 CAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG--GYLKWWNVVTGESSQTF 1215
Score = 157 (60.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 46/172 (26%), Positives = 77/172 (44%)
Query: 326 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 385
H AV FS+ Q + S D T++V+ ++ E+ + +KA H ++
Sbjct: 615 HTDAVYHACFSEDGQR-IASCGVDKTLQVFK----AETGEKLLEIKA------HEDEVLC 663
Query: 386 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI--TASGD 443
A + +D + T S D+ +W V + H + F+ ++ TAS D
Sbjct: 664 CAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSD 723
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT 495
+K+W ++ C T GHT+SV F + SC ADG +KLW V++
Sbjct: 724 CFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKS 775
Score = 147 (56.8 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 413 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 472
+S + R H ++ FS Q + + DKT++++ G L + H VL +F
Sbjct: 607 LSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAF 666
Query: 473 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE--MFATGGSDALV 530
T I +C D VK+W TG + YD+H +++ + + AT SD +
Sbjct: 667 STDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFL 726
Query: 531 NLW 533
LW
Sbjct: 727 KLW 729
Score = 139 (54.0 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 42/233 (18%), Positives = 102/233 (43%)
Query: 301 VTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 360
+T S D ++RLW+++ C A+ +++ ++ + V + D +
Sbjct: 899 LTSSDDQTIRLWETKKVC----------KNSAIVLKQEIDVVF----QENEVMVLAVDNI 944
Query: 361 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG 420
Q +N K + ++ ++P+ + G +D + L + + G
Sbjct: 945 K--RLQLINGKTGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIG 1002
Query: 421 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 480
HK+ + ++F+ + +I++S D +I++W+ + + H +V L + ++++
Sbjct: 1003 HKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYV-FLQAHQETVKDFKLL-KNSKLL 1060
Query: 481 SCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
S DG VK+W++ TG + H+D + + + F++ +D +W
Sbjct: 1061 SWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1113
Score = 129 (50.5 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 28/96 (29%), Positives = 46/96 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+KV +W+ G H + H V+ F ++ LL + S D +++WDL K+C
Sbjct: 679 DKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRN 738
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
T+ H + V + D L S D + LWD++
Sbjct: 739 TMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVK 774
Score = 113 (44.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 33/158 (20%), Positives = 61/158 (38%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 438
H K + + + + + S D + VW V + H+ + + + ++
Sbjct: 1003 HKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQS-EEYVFLQAHQETVKDFKLLK-NSKLL 1060
Query: 439 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 498
+ S D T+KIWSI G K F H +VL + S AD K+W+
Sbjct: 1061 SWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSP 1120
Query: 499 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 536
+ H+ + + + ATG + + +W+ S
Sbjct: 1121 LHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVS 1158
Score = 103 (41.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 78/371 (21%), Positives = 153/371 (41%)
Query: 98 VNLWDLRDYSCKLTVPTYEM--VEAVCAIPPGSAFDSFLSSYNQQTIKK-KRRSLEIHFI 154
V LW++ D K+ + V V P GS SFL+S + QTI+ + + + +
Sbjct: 865 VELWNM-DSCLKVADCRGHLSWVHCVMFSPDGS---SFLTSSDDQTIRLWETKKVCKNSA 920
Query: 155 TVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQL 214
V ++ I ++ + + + D ++ + K G ++ + C++ Q
Sbjct: 921 IVLKQEIDVVFQENEVMVL---AVDNIKRLQLINGKTG-QIDYLIEAQVSCCCLSPHLQY 976
Query: 215 LLYT----TVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 270
+ + VE+ E I R +G+ + + ++F ++ + L +++ +QV++
Sbjct: 977 IAFGGEDGAVEILELLNNRIFQSR-IGHKKTVRHIQFT-DDGKTLISSSDDSSIQVWNWQ 1034
Query: 271 SMSCSYV-LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGA 329
S YV L H E V D L + K+L + S D +V++W + H
Sbjct: 1035 SEE--YVFLQAHQETVK--DFKLLKNSKLL--SWSFDGTVKIWSIITGRIEKDFVCHQDT 1088
Query: 330 VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVA 389
V + S F S S+D T K+WSF+ LS + K + D LA
Sbjct: 1089 VLSCDISPDATKFS-STSADKTAKIWSFELLSP-LHELRGHKGCVRCSVFSVDSTLLATG 1146
Query: 390 PNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW 449
++ + + + ++ H + + FSP +++++A G +K W
Sbjct: 1147 DDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAGG--YLKWW 1204
Query: 450 SISDGSCLKTF 460
++ G +TF
Sbjct: 1205 NVVTGESSQTF 1215
Score = 101 (40.6 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 28/108 (25%), Positives = 48/108 (44%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D+ + V+ + G K H+ V F TD + + S D V++W+ +
Sbjct: 635 GVDKTLQVFKAETGEKLLEIKAHEDEVLCCAF--STDDRFIATCSVDKKVKIWNSMTGGL 692
Query: 67 VATLDKHFSRVTSMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTV 112
V D+H +V T++ L+ +A D + LWDL C+ T+
Sbjct: 693 VHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTM 740
Score = 100 (40.3 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 43/175 (24%), Positives = 74/175 (42%)
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 414
WSFDG + + + + H + S ++P+ + + S D+TA +W L
Sbjct: 1062 WSFDG-TVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSP 1120
Query: 415 VVTFRGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKTFEGHTSSVLRASF 472
+ RGHK + FS VD ++ A+GD I+IW++S+G L ++
Sbjct: 1121 LHELRGHKGCVRCSVFS-VDSTLL-ATGDDNGEIRIWNVSNGELLHLC---APILVEEGA 1175
Query: 473 LTRGAQIVS-CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 526
T G + C + L V G + K W + G+ ++ F T G+
Sbjct: 1176 ATHGGWVTDLCFSPDSKML--VSAGGYL--------KWWNVVTGESSQTFYTNGT 1220
Score = 99 (39.9 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 24/107 (22%), Positives = 48/107 (44%)
Query: 4 LLEGADRKVLVWDVD-GGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ A K+ ++D+ GG GH + F P +++ V +W++
Sbjct: 814 IMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVV--ALSQCCVELWNMD 871
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 109
+ VA H S V + + DGS+ +++ D+ + LW+ + CK
Sbjct: 872 SCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKV-CK 917
Score = 79 (32.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 50 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
G +D V + +LL + + H V + T DG TLIS+ D + +W+
Sbjct: 980 GGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWN 1032
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 243 (90.6 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 82/344 (23%), Positives = 153/344 (44%)
Query: 220 VEVPEKKMELILSKRLV--GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV 277
+EV ++ +E+ SK +V G+ E+ + LA + ++++LS S
Sbjct: 145 MEV-DRAVEIPASKAMVLRGHESEVFICAW-NPVSDLLASGSGDSTARIWNLSESSTG-- 200
Query: 278 LAGHSEIVL--CL-----------DTCAL--SSGKILIVTGSKDNSVRLWDSESRCCVGV 322
G +++VL C+ D +L +S L+ TGS D R+W + +
Sbjct: 201 --GSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTL 258
Query: 323 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 382
G H G + A+ ++KK NF++S D T +W D + +A+Q + + +
Sbjct: 259 GQ-HKGPIFALKWNKK-GNFILSAGVDKTTIIW--DAHTGEAKQQFPFHSAPALDVDWQS 314
Query: 383 INSLAVAPNDSL--VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 440
N+ A D VC Q+R P + TF+GH + ++++ P ++ +
Sbjct: 315 NNTFASCSTDMCIHVCKLGQER-------P----IKTFQGHTNEVNAIKWDPTGNLLASC 363
Query: 441 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG-------AQIV---SCGADGLVKL 490
S D T+K+WS+ +C+ + H+ + + G A ++ S D V+L
Sbjct: 364 SDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRL 423
Query: 491 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 534
W G CI T KH++ ++++A A+G D V++W+
Sbjct: 424 WDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWN 467
Score = 147 (56.8 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 38/167 (22%), Positives = 76/167 (45%)
Query: 379 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD---- 434
H ++N++ P +L+ + S D T +W + V + H + I+++++SP
Sbjct: 344 HTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTN 403
Query: 435 ------QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 488
+ +AS D T+++W G+C+ T H V +F G + S D V
Sbjct: 404 NPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCV 463
Query: 489 KLWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSDALVNL 532
+W ++G + +Y + I+ + + G K A+ GS +++L
Sbjct: 464 HIWNTQSGALVNSY-RGTGGIFEVCWNSTGDKVGASASDGSVCVLDL 509
Score = 133 (51.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 32/102 (31%), Positives = 50/102 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILF--------HPDTDKSLLFSGSDDATVRVWD 60
D + +W + C H + H + +I + +P+ + L S S D+TVR+WD
Sbjct: 366 DMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWD 425
Query: 61 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
C+ TL KH V S+A + DG L S DK V++W+
Sbjct: 426 AERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWN 467
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 34/138 (24%), Positives = 62/138 (44%)
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----------CLKTFEG-- 462
+ RGH+ ++ ++PV ++ + SGD T +IW++S+ S C++ EG
Sbjct: 159 MVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESSTGGSTQLVLRHCIR--EGGQ 216
Query: 463 ---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
V + + G + + DG ++WT + G +T +H+ I+AL KK
Sbjct: 217 DVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGN 275
Query: 520 MFATGGSDALVNLWHDST 537
+ G D +W T
Sbjct: 276 FILSAGVDKTTIIWDAHT 293
Score = 85 (35.0 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 41 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 100
+++ +LL +GS D R+W +TL +H + ++ G+ ++SAG DK +
Sbjct: 230 NSEGTLLATGSYDGFARIWTKDGN-LASTLGQHKGPIFALKWNKKGNFILSAGVDKTTII 288
Query: 101 WDLRDYSCKLTVP 113
WD K P
Sbjct: 289 WDAHTGEAKQQFP 301
Score = 73 (30.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 27 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-----------LAKKCVAT--LDKH 73
+GH+ V ++P +D LL SGS D+T R+W+L + + C+ D
Sbjct: 162 RGHESEVFICAWNPVSD--LLASGSGDSTARIWNLSESSTGGSTQLVLRHCIREGGQDVP 219
Query: 74 FSR-VTSMAITSDGSTLISAGRDKVVNLW 101
++ VTS+ S+G+ L + D +W
Sbjct: 220 SNKDVTSLDWNSEGTLLATGSYDGFARIW 248
Score = 40 (19.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 57 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
R ++ A K + L H S V A L S D +W+L + S
Sbjct: 149 RAVEIPASKAMV-LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESS 198
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 243 (90.6 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 66/205 (32%), Positives = 91/205 (44%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
++ L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 504 KHEDKI----WALAVGKKTEMFATG 524
+HE + WA T ATG
Sbjct: 274 EHEHVVECISWAPESSYSTISEATG 298
Score = 227 (85.0 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 73/283 (25%), Positives = 121/283 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D + L GH++ V D +GK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHTGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 374
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 375 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CV-WRLPDLVSVVTFRGHKRGIWSVEF 430
++A+ D + VA + + C+ W S ++ G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTIS---EATGSETKKS 304
Query: 431 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 490
+++ S DKTIK+W IS G CL T GH + V F + G I+SC D +++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 491 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
W + C+ T + HE + +L K TG D V +W
Sbjct: 365 WDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 216 (81.1 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 60/272 (22%), Positives = 119/272 (43%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 353 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 402
+VW AE + + + A ++++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNA 378
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 212 (79.7 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 520 MFATGGSDALVNLWHDST 537
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 183 (69.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 1 MFALLEGA--DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 58
+F+++ A D + VWD + G KGH V I F D LL S S D T+++
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF--DHTGKLLASCSADMTIKL 176
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C T +
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-- 234
Query: 119 EAVCAIPPGSAFDSFLSSYNQQTIK 143
E V + P S N QT++
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVR 259
Score = 176 (67.0 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 44/167 (26%), Positives = 74/167 (44%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCV 227
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H V + DG+ + S D+ V +W + CK + +E V + P
Sbjct: 228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 172
S++ + + +T K + F+ G R ++MW+ + CL
Sbjct: 288 SSYSTISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDISTGMCL 331
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 34/102 (33%), Positives = 54/102 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
LL G+ D+ + +WD+ G C GH V +LFH + + S +DD T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDFK 368
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 162 (62.1 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH+ V+ ++FHP S++ S S+DAT++VWD TL H V ++ G
Sbjct: 106 GHRSPVTRVIFHPVF--SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK--K 144
L S D + LWD + + C T+ ++ V +V +P G D +S+ +TIK +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG---DHIVSASRDKTIKMWE 220
Query: 145 KRRSLEIHFITVGERGIVRMW--NADSACLYEQKSSDVTI 182
+ + T G R VRM N D L S+D T+
Sbjct: 221 VQTGYCVKTFT-GHREWVRMVRPNQDGT-LIASCSNDQTV 258
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 47 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNK 370
Query: 107 SCKLTVPTYE 116
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 51 (23.0 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H S VT + S ++SA D + +WD
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Score = 37 (18.1 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDIST 327
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 241 (89.9 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 73/280 (26%), Positives = 131/280 (46%)
Query: 215 LLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC 274
L+ T+EV E+ K L+G+ + +FL + L+ + + ++ +DL S +
Sbjct: 315 LINDTLEVDEEDRTATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTS-IRYWDLESFTN 373
Query: 275 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 334
+ + GH+ V LD +S + + S D++ RLW + + + GH+ V V
Sbjct: 374 TVLYQGHAYPVWDLD---ISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVK 430
Query: 335 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL 394
F N+L +GS+D T+++WS A+Q +++ + H + LA +PN
Sbjct: 431 FHPN-SNYLATGSTDKTVRLWS-------AQQGNSVR---LFTGHCGPVRCLAFSPNGQY 479
Query: 395 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI--- 451
+ + +D+ +W L GH I SV FS V+ +AS D +++IW I
Sbjct: 480 LVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSK 539
Query: 452 -----SDGSC---LKTFEGHTSSVLRASFLTRGAQIVSCG 483
+DGS L + G S+VL F+ G++++ G
Sbjct: 540 HNSTPADGSSSELLGVYTGQMSTVLNVQFMA-GSRLLVTG 578
Score = 235 (87.8 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 62/232 (26%), Positives = 100/232 (43%)
Query: 313 DSESRCCVG--VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
D E R V GH G V + F + L+S S D +I+ W + ++
Sbjct: 323 DEEDRTATERKVLLGHCGPVYSTRFLPD-SSALLSCSEDTSIRYWDLESFTNTV------ 375
Query: 371 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 430
+ H + L ++P+ + S D TA +W + + GH G+ V+F
Sbjct: 376 ----LYQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKF 431
Query: 431 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 490
P + T S DKT+++WS G+ ++ F GH V +F G +VS G D L+KL
Sbjct: 432 HPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKL 491
Query: 491 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW-----HDST 537
W + +G H D I ++ + + A+ D V +W H+ST
Sbjct: 492 WDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKSKHNST 543
Score = 148 (57.2 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 31/95 (32%), Positives = 47/95 (49%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D +W D + + GH V + FHP+++ L +GS D TVR+W V
Sbjct: 402 DHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSN--YLATGSTDKTVRLWSAQQGNSVR 459
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
H V +A + +G L+SAG D+++ LWDL
Sbjct: 460 LFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDL 494
Score = 139 (54.0 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 29/96 (30%), Positives = 45/96 (46%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ V +W G F GH G V + F P+ L S +D +++WDL +
Sbjct: 444 DKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQ--YLVSAGEDQLLKLWDLASGTLYK 501
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
L H +TS+ + D S + SA D V +WD++
Sbjct: 502 DLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIK 537
Score = 55 (24.4 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 243 LDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC-SYVLAGHSEIVLCLDTCALSSGKILIV 301
L + L +EE + I+ VQ S ++ SY ++ L+T S L+
Sbjct: 228 LPMYILQKEEDLDFLQETIKSVQDGPPSLITIYSYAFYNTEQL---LNTAEASPDNKLLA 284
Query: 302 TGSKDNSVRLWDSESR 317
TG ++S++LW S+
Sbjct: 285 TGLNNSSIKLWSLTSK 300
Score = 47 (21.6 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 43 DKSLLFSGSDDATVRVWDLLAK 64
D LL +G +++++++W L +K
Sbjct: 279 DNKLLATGLNNSSIKLWSLTSK 300
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 237 (88.5 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 77/301 (25%), Positives = 138/301 (45%)
Query: 236 VGYNEEILDLKFLGEEEQYL-AVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
V +++ + + F E+ L A+ T Q+ YD ++ + ++ S
Sbjct: 104 VSHSDRVKSVDFHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKST-----RAAKFI 158
Query: 295 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 354
K I T S D +R++D+E+ + T H + ++ L +L+S S D I+V
Sbjct: 159 HRKNWIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPTLP-YLISASDDRKIRV 217
Query: 355 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SLVCTGSQDRTACVWRLPDLV 413
W ++ E M + + H I +AV P D + +GS D+T VW+L +
Sbjct: 218 WDWEN-----EWRMEQEFQE----HAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQE 268
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG-HTSSVLRASF 472
S+ T GH++G+ VEF ++V + S D +I +W I C++T + H ++V +F
Sbjct: 269 SICTLEGHEKGVNCVEFLTGGRIV-SGSDDCSICVWDIQTQKCIETLKNAHKNNV---TF 324
Query: 473 LTR-GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 531
+T I+S D VK+W +T + + + W +A GK ++ A G V
Sbjct: 325 VTPFKTWIISGAEDSTVKIWNSQTFSLEKELNFEKGRAWCVAAGK-SDAIAVGFDSGAVT 383
Query: 532 L 532
+
Sbjct: 384 V 384
Score = 213 (80.0 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 70/260 (26%), Positives = 122/260 (46%)
Query: 281 HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQ 340
HS+ V +D S K I+T +V++W+ +++ V + A F + +
Sbjct: 106 HSDRVKSVD---FHSEKPWILTALHTGNVQIWNYDTKTLVKAMEVSEKSTRAAKFIHR-K 161
Query: 341 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 400
N++ + S D I+++ DAE +L + AH I SL V P + + S
Sbjct: 162 NWIATASDDQQIRIF-------DAET-FSLINE--FTAHSDFIRSLTVHPTLPYLISASD 211
Query: 401 DRTACVWRLPDLVSVVT-FRGHKRGIWSVEFSPVD-QVVITASGDKTIKIWSISDGSCLK 458
DR VW + + F+ H I + +P D ++ ++ S DKT+K+W + + +
Sbjct: 212 DRKIRVWDWENEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESIC 271
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY-DKHEDKIWALAVGKK 517
T EGH V FLT G +IVS D + +W ++T +CI T + H++ + K
Sbjct: 272 TLEGHEKGVNCVEFLT-GGRIVSGSDDCSICVWDIQTQKCIETLKNAHKNNV-TFVTPFK 329
Query: 518 TEMFATGGSDALVNLWHDST 537
T + + G D+ V +W+ T
Sbjct: 330 TWIIS-GAEDSTVKIWNSQT 348
Score = 146 (56.5 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 47/183 (25%), Positives = 81/183 (44%)
Query: 9 DRKVLVWDVDGGF-CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
DRK+ VWD + + F+ H + I +P+ D + SGS D T++VW L ++ +
Sbjct: 212 DRKIRVWDWENEWRMEQEFQEHAHYIMQIAVNPE-DPEMFVSGSLDKTLKVWKLGEQESI 270
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIP-- 125
TL+ H V + + G ++S D + +WD++ C T+ P
Sbjct: 271 CTLEGHEKGVNCVEFLT-GGRIVSGSDDCSICVWDIQTQKCIETLKNAHKNNVTFVTPFK 329
Query: 126 ---PGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTI 182
A DS + +N QT ++ E++F E+G R W C+ KS + +
Sbjct: 330 TWIISGAEDSTVKIWNSQTFSLEK---ELNF----EKG--RAW-----CVAAGKSDAIAV 375
Query: 183 SFE 185
F+
Sbjct: 376 GFD 378
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 241 (89.9 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 73/249 (29%), Positives = 109/249 (43%)
Query: 250 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 309
+ ++ A + ++V+DL+S L GH + L+ +SS + + +DN V
Sbjct: 217 KSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLE---VSSRHPYLFSVGEDNKV 273
Query: 310 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 369
WD ES V GH V +VA L + L SG D+ ++VW D N
Sbjct: 274 LCWDLESNKQVRNYYGHRQGVYSVALHPTL-DVLFSGGRDNCVRVW-------DMRTRAN 325
Query: 370 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
+ + H I SL D V +GS D T +W L S T HK+G+ S+
Sbjct: 326 IFE---MKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKKGVRSMV 382
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 489
+ T + D IK W DGS +K GH +S++ A L +VS G +G +
Sbjct: 383 IHEKEYSFATGAADN-IKQWKCPDGSFIKNLSGH-NSIINAMALNADNVLVSGGDNGSIS 440
Query: 490 LWTVRTGEC 498
W +TG C
Sbjct: 441 FWDWKTGYC 449
Score = 237 (88.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 58/210 (27%), Positives = 97/210 (46%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
+GH G V A+A K + F +GS+D+TIKVW D A + K + H I
Sbjct: 204 SGHTGWVRAIAVDKSNEWF-ATGSTDNTIKVW------DLASGEL----KVTLTGHVSAI 252
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
L V+ + + +D W L V + GH++G++SV P V+ + D
Sbjct: 253 RGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRD 312
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
+++W + + + +GH ++L Q++S D VKLW + TG AT
Sbjct: 313 NCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLT 372
Query: 504 KHEDKIWALAVGKKTEMFATGGSDALVNLW 533
H+ + ++ + +K FATG +D + W
Sbjct: 373 NHKKGVRSMVIHEKEYSFATGAADN-IKQW 401
Score = 180 (68.4 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 66/271 (24%), Positives = 114/271 (42%)
Query: 231 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
L L G+ I L+ + YL +V +DL S GH + V +
Sbjct: 241 LKVTLTGHVSAIRGLE-VSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSV-- 297
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
AL ++ +G +DN VR+WD +R + GH G + ++ S+ ++SGS D
Sbjct: 298 -ALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLK-SQNADPQVISGSMDT 355
Query: 351 TIKVWSF-DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
T+K+W G S A + H K + S+ + + TG+ D W+
Sbjct: 356 TVKLWDLATGTS-----------AATLTNHKKGVRSMVIHEKEYSFATGAADNIK-QWKC 403
Query: 410 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCL-KT--------F 460
PD + GH I ++ + D V+++ + +I W G C KT
Sbjct: 404 PDGSFIKNLSGHNSIINAMALN-ADNVLVSGGDNGSISFWDWKTGYCFQKTQSIVQPGSL 462
Query: 461 EGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
EG + + +F G+++++C AD +K +
Sbjct: 463 EGE-AGIFDMAFDKTGSRLITCEADKTIKFY 492
Score = 159 (61.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D KVL WD++ + GH+ V S+ HP D +LFSG D VRVWD+ +
Sbjct: 268 GEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLD--VLFSGGRDNCVRVWDMRTRAN 325
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
+ + H + S+ + +IS D V LWDL + T+ ++
Sbjct: 326 IFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHK 375
Score = 157 (60.3 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 42/167 (25%), Positives = 66/167 (39%)
Query: 371 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 430
K V++ H + ++AV ++ TGS D T VW L VT GH I +E
Sbjct: 198 KLMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEV 257
Query: 431 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 490
S + + D + W + ++ + GH V + + S G D V++
Sbjct: 258 SSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRV 317
Query: 491 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
W +RT I H+ I +L +G D V LW +T
Sbjct: 318 WDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLAT 364
Score = 131 (51.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 50/196 (25%), Positives = 81/196 (41%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH G V +I D +GS D T++VWDL + + TL H S + + ++S
Sbjct: 205 GHTGWVRAIAV--DKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHP 262
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKK-KR 146
L S G D V WDL S K Y + V ++ D S ++
Sbjct: 263 YLFSVGEDNKVLCWDLE--SNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDM 320
Query: 147 RSLEIHFITVGERGIV---RMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQ 203
R+ F G +G + + NAD + S D T+ ++ D G +AAT+ +
Sbjct: 321 RTRANIFEMKGHKGTILSLKSQNADPQVI--SGSMDTTV--KLWDLATGTSAATLTNHKK 376
Query: 204 GLLCVTADQQLLLYTT 219
G+ + ++ + T
Sbjct: 377 GVRSMVIHEKEYSFAT 392
Score = 123 (48.4 bits), Expect = 0.00041, P = 0.00041
Identities = 35/101 (34%), Positives = 45/101 (44%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D V VWD+ KGHKG + S L + D ++ SGS D TV++WDL
Sbjct: 310 GRDNCVRVWDMRTRANIFEMKGHKGTILS-LKSQNADPQVI-SGSMDTTVKLWDLATGTS 367
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
ATL H V SM I + + D + W D S
Sbjct: 368 AATLTNHKKGVRSMVIHEKEYSFATGAADNIKQ-WKCPDGS 407
Score = 53 (23.7 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 10/48 (20%), Positives = 20/48 (41%)
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 112
K + + H V ++A+ + D + +WDL K+T+
Sbjct: 198 KLMRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTL 245
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 242 (90.2 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 64/208 (30%), Positives = 93/208 (44%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SLMVSASEDATIKVWDYE--AGDFER--TLKG------HTDSV 153
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
++ L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KT+K+W ++ G C+KTF GH V G + SC D V++W V T EC A
Sbjct: 214 KTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELR 273
Query: 504 KHEDKI----WALAVGKKTEMFATGGSD 527
+HE + WA T ATG +
Sbjct: 274 EHEHVVECISWAPESAHPTISEATGSEN 301
Score = 230 (86.0 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 69/274 (25%), Positives = 123/274 (44%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L G+ + + D+ F + + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ IV+ S+D ++++W+ + CV TGH V V ++ L S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQD-GTLLASCSNDQTV 258
Query: 353 KVWSFDGLSDDAE-----QPMNLKAKAVVAAH-------GKDINSLAVAPNDSLVCTGSQ 400
+VW AE + + A +AH G + N + P L+ +GS+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSE-NKKSGKPGPFLL-SGSR 316
Query: 401 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 460
D+T +W + + ++T GH + V F P + V++ + DKT++IW + C+KT
Sbjct: 317 DKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTL 376
Query: 461 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
H V F +V+ D VK+W R
Sbjct: 377 SAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 221 (82.9 bits), Expect = 7.6e-16, Sum P(2) = 7.6e-16
Identities = 72/282 (25%), Positives = 119/282 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D + L GH++ V D +GK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYEAGDFERTLKGHTDSVQ--DISFDQTGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 374
GH V +VA + +VS S D T+K+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 375 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 431
++A+ D + VA + + C+ P+ S G + +
Sbjct: 248 LLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SAHPTISEATGSENKKSG 305
Query: 432 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
+++ S DKTIK+W IS G CL T GH + V F G +VSC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIW 365
Query: 492 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ C+ T HE + +L K + TG D V +W
Sbjct: 366 DYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 211 (79.3 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 42/161 (26%), Positives = 74/161 (45%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ H + + P SL+ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQ 160
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE 220
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
V TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 198 (74.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 43/138 (31%), Positives = 66/138 (47%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
Q R W +P GH+ + V F PV ++++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERT 145
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 520 MFATGGSDALVNLWHDST 537
+ D + +W +T
Sbjct: 206 HIVSASRDKTMKMWEVAT 223
Score = 185 (70.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 46/145 (31%), Positives = 70/145 (48%)
Query: 1 MFALLEGA--DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 58
+F+L+ A D + VWD + G KGH V I F D LL S S D T+++
Sbjct: 119 VFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISF--DQTGKLLASCSADMTIKL 176
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WD +C+ T+ H V+S+AI +G ++SA RDK + +W++ C T +
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHR-- 234
Query: 119 EAVCAIPPGSAFDSFLSSYNQQTIK 143
E V + P S N QT++
Sbjct: 235 EWVRMVRPNQDGTLLASCSNDQTVR 259
Score = 170 (64.9 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 45/167 (26%), Positives = 72/167 (43%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTMKMWEVATGYCV 227
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H V + DG+ L S D+ V +W + CK + +E V + P
Sbjct: 228 KTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 172
SA + + + K + F+ G R ++MW+ + CL
Sbjct: 288 SAHPTISEATGSENKKSGKPG---PFLLSGSRDKTIKMWDISTGMCL 331
Score = 168 (64.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 34/102 (33%), Positives = 53/102 (51%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
LL G+ D+ + +WD+ G C GH V +LFHP + S +DD T+R+WD
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGG--RFVVSCADDKTLRIWDYK 368
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+C+ TL H VTS+ +++ D+ V +W+ R
Sbjct: 369 NKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 167 (63.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 50/159 (31%), Positives = 75/159 (47%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH+ V+ ++FHP SL+ S S+DAT++VWD A TL H V ++ G
Sbjct: 106 GHRSPVTRVIFHPVF--SLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIKKKR 146
L S D + LWD + + C T+ ++ V +V +P G D +S+ +T+K
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG---DHIVSASRDKTMKMWE 220
Query: 147 RSLEIHFIT-VGERGIVRMW--NADSACLYEQKSSDVTI 182
+ T G R VRM N D L S+D T+
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQDGTLL-ASCSNDQTV 258
Score = 118 (46.6 bits), Expect = 0.0010, P = 0.0010
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 47 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
L SGS D T+++WD+ C+ TL H + V + G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNK 370
Query: 107 SCKLTVPTYE 116
C T+ +E
Sbjct: 371 RCMKTLSAHE 380
Score = 50 (22.7 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H S VT + S ++SA D + +WD
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWD 136
Score = 37 (18.1 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDIST 327
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 246 (91.7 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 356 SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 415
S G++ E P AV+ H + + +P D + T S DRTA +W+ D +
Sbjct: 274 SLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKT-DGTLL 332
Query: 416 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 475
TF GH + V F P + + T S DKT ++W I+ G+ L EGH+ SV +F
Sbjct: 333 QTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQD 392
Query: 476 GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
GA SCG D L ++W +RTG I + H ++++ A+GG D +W
Sbjct: 393 GALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIW 450
Score = 188 (71.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 55/238 (23%), Positives = 101/238 (42%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+ T S D + +LW ++ + GH+ + VAF +L + S D T ++W
Sbjct: 313 LATASADRTAKLWKTDGTL-LQTFEGHLDRLARVAFHPS-GKYLGTTSYDKTWRLWD--- 367
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
++ AE + H + + +A + +L + D A VW L S++ F+
Sbjct: 368 INTGAELLLQ-------EGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQ 420
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR-GAQ 478
GH + ++SV FSP + + D +IW + L H + V + + + G
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYF 480
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 536
+ + D V +W+ R + + HE K+ +L + + AT D + LW S
Sbjct: 481 LATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSS 538
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/138 (30%), Positives = 66/138 (47%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D VWD+ G F+GH V S+ F P+ L SG +D R+WDL +K
Sbjct: 400 GLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYH--LASGGEDNQCRIWDLRMRKS 457
Query: 67 VATLDKHFSRVTSMAIT-SDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIP 125
+ + H + V+ + +G L +A D VN+W RD+S ++ +E A I
Sbjct: 458 LYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDIT 517
Query: 126 PGSAFDSFLSSYNQQTIK 143
S+ + +S + +TIK
Sbjct: 518 ADSSCIATVS--HDRTIK 533
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 45/176 (25%), Positives = 70/176 (39%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D+ +WD++ G +GH V I F D +L S D+ RVWDL + +
Sbjct: 360 DKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDG--ALAASCGLDSLARVWDLRTGRSIL 417
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 128
H V S+ + +G L S G D +WDLR +P + + + P
Sbjct: 418 VFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQE 477
Query: 129 AFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWN--ADSACLYEQKSSDVTI 182
+ +SY+ + R + G V + ADS+C+ S D TI
Sbjct: 478 GYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCI-ATVSHDRTI 532
Score = 128 (50.1 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 31/97 (31%), Positives = 45/97 (46%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
ADR +W DG F+GH ++ + FHP L + S D T R+WD+ +
Sbjct: 318 ADRTAKLWKTDGTLL-QTFEGHLDRLARVAFHPSG--KYLGTTSYDKTWRLWDINTGAEL 374
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
+ H V +A DG+ S G D + +WDLR
Sbjct: 375 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLR 411
Score = 97 (39.2 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 30/130 (23%), Positives = 54/130 (41%)
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 296
G+ + + + F +LA Q +++DL Y++ H+ +V + G
Sbjct: 421 GHIKPVFSVNF-SPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKY-EPQEG 478
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 356
L T S D V +W V GH V ++ + + + + S D TIK+W+
Sbjct: 479 YFL-ATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITAD-SSCIATVSHDRTIKLWT 536
Query: 357 FDGLSDDAEQ 366
G D+ E+
Sbjct: 537 SSGNDDEDEE 546
Score = 61 (26.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 14/60 (23%), Positives = 25/60 (41%)
Query: 43 DKSLLFSGSDDATVRVWDL-LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
D +L + S ++W++ +A L H R T + + L +A D+ LW
Sbjct: 266 DGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLW 325
Score = 41 (19.5 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 53 DATVRVWDLLAKKCVATLDKHFSR---VTSMAITSDGSTLISAGRDKVVNLWDL 103
DA + W L K +A +F +T + + DG L + V LW++
Sbjct: 232 DAETK-WALKHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEM 284
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 222 (83.2 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 65/253 (25%), Positives = 123/253 (48%)
Query: 234 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
RL G+ + F + + +A +++ ++++D++ C +VL GH V +T +
Sbjct: 63 RLAGHRGPVKSCCF-SPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSV---ETVSF 118
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
S + +G D +W+ +S V + GH ++ + FS + L +GS D T+
Sbjct: 119 SPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDS-LATGSWDSTVH 177
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
+W S NL+ H +I+ L + + L+ +GS D+T CVW+ P
Sbjct: 178 IWDLRA-STPVVSYHNLEG------HTGNISCLCYSAS-GLLASGSWDKTICVWK-PTTN 228
Query: 414 SV-VTFRGHKRGIWSVEFSPVDQVVITASG-DKTIKIWSISDGSCLKTFEGHTSSVLRAS 471
++ + +GH + S+ FSP D++ + ++G +T+K+W G CL+T +G V A
Sbjct: 229 NLPLQLKGHTIWVNSLAFSP-DELKLASAGYSRTVKVWDCLTGKCLETLKGMLD-VAHAC 286
Query: 472 FLTRGAQIVSCGA 484
T +++ GA
Sbjct: 287 IFTPDGKLLVSGA 299
Score = 222 (83.2 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 75/271 (27%), Positives = 117/271 (43%)
Query: 234 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 293
R G + ++ + + L A++ V V+ S + LAGH V +C
Sbjct: 20 RFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPV---KSCCF 76
Query: 294 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 353
S LI + S D+S+RLWD C+ V GH +V V+FS + L SG D
Sbjct: 77 SPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQ-LASGGWDKRAI 135
Query: 354 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 413
VW + + ++L + H I S +P + TGS D T +W L
Sbjct: 136 VWEVQ-----SGRRVHL-----LVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRAST 185
Query: 414 SVVTFR---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
VV++ GH I + +S ++ + S DKTI +W + + +GHT V
Sbjct: 186 PVVSYHNLEGHTGNISCLCYS-ASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSL 244
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIAT 501
+F ++ S G VK+W TG+C+ T
Sbjct: 245 AFSPDELKLASAGYSRTVKVWDCLTGKCLET 275
Score = 195 (73.7 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 48/175 (27%), Positives = 81/175 (46%)
Query: 367 PMNLKAKAVVAA--------HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 418
PMN++A +A H ++N A +P+ + T S D VW +
Sbjct: 5 PMNIRAPTRLAVGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRL 64
Query: 419 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 478
GH+ + S FSP +++ ++S D +I++W ++ CL +GH SV SF Q
Sbjct: 65 AGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQ 124
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ S G D +W V++G + H D I + ++ ATG D+ V++W
Sbjct: 125 LASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIW 179
Score = 167 (63.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 49/215 (22%), Positives = 89/215 (41%)
Query: 326 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 385
H G V AFS + L++ S D + VW G L + +A H + S
Sbjct: 25 HHGEVNCSAFSPDGRT-LLTASDDGCVYVW---GTKSG-----RLLWR--LAGHRGPVKS 73
Query: 386 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 445
+P+ L+ + S D + +W + + +GH+R + +V FSP + + + DK
Sbjct: 74 CCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKR 133
Query: 446 IKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY--- 502
+W + G + GH S+ + F + + D V +W +R + +Y
Sbjct: 134 AIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNL 193
Query: 503 DKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
+ H I L + + A+G D + +W +T
Sbjct: 194 EGHTGNISCLCYSA-SGLLASGSWDKTICVWKPTT 227
Score = 144 (55.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 32/96 (33%), Positives = 47/96 (48%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D V VW G GH+G V S F PD L+ S S D ++R+WD+ KC+
Sbjct: 47 DGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDG--RLIASSSSDHSIRLWDVARSKCLH 104
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
L H V +++ + D L S G DK +W+++
Sbjct: 105 VLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQ 140
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
+D + +WDV C H KGH+ V ++ F PD+ + L SG D VW++ + + V
Sbjct: 88 SDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQ--LASGGWDKRAIVWEVQSGRRV 145
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
L H + S + +L + D V++WDLR
Sbjct: 146 HLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLR 182
Score = 135 (52.6 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 32/98 (32%), Positives = 50/98 (51%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D++ +VW+V G H GH + S F P +D L +GS D+TV +WDL A
Sbjct: 129 GWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDS--LATGSWDSTVHIWDLRASTP 186
Query: 67 VAT---LDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 101
V + L+ H ++ + ++ G L S DK + +W
Sbjct: 187 VVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVW 223
Score = 122 (48.0 bits), Expect = 0.00020, P = 0.00020
Identities = 38/128 (29%), Positives = 53/128 (41%)
Query: 3 ALLEGA-DRKVLVWDVDGG---FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 58
+L G+ D V +WD+ H +GH G +S + + + LL SGS D T+ V
Sbjct: 166 SLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCY---SASGLLASGSWDKTICV 222
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
W L H V S+A + D L SAG + V +WD C T+ V
Sbjct: 223 WKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDV 282
Query: 119 EAVCAIPP 126
C P
Sbjct: 283 AHACIFTP 290
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 240 (89.5 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 55/179 (30%), Positives = 98/179 (54%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
G V FS Q +L++GS D ++VW+F + + + +A+ + +
Sbjct: 212 GQKSHVECAQFSPDGQ-YLITGSVDGFLEVWNFT--TGKVRKDLKYQAQDQFMMMEQAVL 268
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF-RGHKRGIWSVEFSPVDQVVITASGD 443
+L + + +V +G+QD VWR+ + F + H +GI ++FS + V++AS D
Sbjct: 269 ALNFSRDSEMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQVLSASFD 328
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 502
T+++ + G LK F+GH+S V A+F G ++S +DG VK+W+++T EC+ATY
Sbjct: 329 YTVRLHGLKSGKMLKEFKGHSSFVNEATFTPDGHSVLSASSDGTVKVWSLKTTECVATY 387
Score = 152 (58.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 74/299 (24%), Positives = 126/299 (42%)
Query: 200 PSNQGLLCVTADQQLLL--YTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAV 257
P Q L+ + D L + +TT +V K ++ + + + +L L F + E +
Sbjct: 224 PDGQYLITGSVDGFLEVWNFTTGKV-RKDLKYQAQDQFMMMEQAVLALNFSRDSEMVASG 282
Query: 258 ATNIEQVQVYDLSSMSCSYVLA-GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES 316
A + Q++V+ + + C H++ + CL S +++ S D +VRL +S
Sbjct: 283 AQD-GQIKVWRIITGQCLRKFEKAHTKGITCLQ---FSRDNSQVLSASFDYTVRLHGLKS 338
Query: 317 RCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAE-QPMNLKAKAV 375
+ GH V F+ + L S SSD T+KVWS A +P+ + AV
Sbjct: 339 GKMLKEFKGHSSFVNEATFTPDGHSVL-SASSDGTVKVWSLKTTECVATYKPLGNEL-AV 396
Query: 376 VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKR--GIW-SVEFSP 432
+ L P +VC S T + + + V +F KR G + S SP
Sbjct: 397 -----NTVLILPKNPEHFIVCNRSN--TVVIMNMQGQI-VRSFSSGKREGGAFISATLSP 448
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
+ + A D+ + +S+S G +T H V+ + + S DGL+KLW
Sbjct: 449 RGEFIYCAGEDQVLYCFSVSSGKLERTLNVHEKDVIGLTHHPHQNLLASYSEDGLLKLW 507
Score = 145 (56.1 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 52/242 (21%), Positives = 100/242 (41%)
Query: 299 LIVTGSKDNSVRLWDS-ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 357
++ +G++D +++W +C H + + FS+ L S S D+T+++
Sbjct: 278 MVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQVL-SASFDYTVRL--- 333
Query: 358 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 417
GL K H +N P+ V + S D T VW L V T
Sbjct: 334 HGLKSG-------KMLKEFKGHSSFVNEATFTPDGHSVLSASSDGTVKVWSLKTTECVAT 386
Query: 418 FR--GHKRGIWSVEFSPVD-QVVITASGDKTIKIWSISDGSCLKTFEG---HTSSVLRAS 471
++ G++ + +V P + + I + T+ I ++ G +++F + + A+
Sbjct: 387 YKPLGNELAVNTVLILPKNPEHFIVCNRSNTVVIMNMQ-GQIVRSFSSGKREGGAFISAT 445
Query: 472 FLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 531
RG I G D ++ ++V +G+ T + HE + L + A+ D L+
Sbjct: 446 LSPRGEFIYCAGEDQVLYCFSVSSGKLERTLNVHEKDVIGLTHHPHQNLLASYSEDGLLK 505
Query: 532 LW 533
LW
Sbjct: 506 LW 507
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 52/208 (25%), Positives = 92/208 (44%)
Query: 329 AVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAV 388
AV A+ FS+ + + SG+ D IKVW Q + KA H K I L
Sbjct: 266 AVLALNFSRDSE-MVASGAQDGQIKVWRII-----TGQCLRKFEKA----HTKGITCLQF 315
Query: 389 APNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKI 448
+ ++S V + S D T + L + F+GH + F+P V++AS D T+K+
Sbjct: 316 SRDNSQVLSASFDYTVRLHGLKSGKMLKEFKGHSSFVNEATFTPDGHSVLSASSDGTVKV 375
Query: 449 WSISDGSCLKTFE--GHTSSVLRASFLTRGAQ-IVSCGADGLVKLWTVRTGECIATYD-- 503
WS+ C+ T++ G+ +V L + + + C V + ++ G+ + ++
Sbjct: 376 WSLKTTECVATYKPLGNELAVNTVLILPKNPEHFIVCNRSNTVVIMNMQ-GQIVRSFSSG 434
Query: 504 KHEDKIWALA-VGKKTEMFATGGSDALV 530
K E + A + + E G D ++
Sbjct: 435 KREGGAFISATLSPRGEFIYCAGEDQVL 462
Score = 130 (50.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 37/112 (33%), Positives = 53/112 (47%)
Query: 7 GA-DRKVLVWDVDGGFCTHYF-KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK 64
GA D ++ VW + G C F K H ++ + F D S + S S D TVR+ L +
Sbjct: 282 GAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQF--SRDNSQVLSASFDYTVRLHGLKSG 339
Query: 65 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 116
K + H S V T DG +++SA D V +W L+ C V TY+
Sbjct: 340 KMLKEFKGHSSFVNEATFTPDGHSVLSASSDGTVKVWSLKTTEC---VATYK 388
Score = 53 (23.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 21/89 (23%), Positives = 33/89 (37%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-----DKHF---SRVTS 79
G K V F PD L +GS D + VW+ K L D+ V +
Sbjct: 212 GQKSHVECAQFSPDGQ--YLITGSVDGFLEVWNFTTGKVRKDLKYQAQDQFMMMEQAVLA 269
Query: 80 MAITSDGSTLISAGRDKVVNLWDLRDYSC 108
+ + D + S +D + +W + C
Sbjct: 270 LNFSRDSEMVASGAQDGQIKVWRIITGQC 298
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 240 (89.5 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 504 KHEDKI----WALAVGKKTEMFATG 524
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 228 (85.3 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 374
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 375 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 431
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 432 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 492 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 353 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 402
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 520 MFATGGSDALVNLWHDST 537
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 184 (69.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 1 MFALLEGA--DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 58
+F+++ A D + VWD + G KGH V I F D LL S S D T+++
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF--DHSGKLLASCSADMTIKL 176
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C T +
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-- 234
Query: 119 EAVCAIPPGSAFDSFLSSYNQQTIK 143
E V + P S N QT++
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVR 259
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCV 227
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H V + DG+ + S D+ V +W + CK + +E V + P
Sbjct: 228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 172
S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 288 SSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
LL G+ D+ + +WDV G C GH V +LFH + + S +DD T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYK 368
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 163 (62.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH+ V+ ++FHP S++ S S+DAT++VWD TL H V ++ G
Sbjct: 106 GHRSPVTRVIFHPVF--SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK--K 144
L S D + LWD + + C T+ ++ V +V +P G D +S+ +TIK +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG---DHIVSASRDKTIKMWE 220
Query: 145 KRRSLEIHFITVGERGIVRMW--NADSACLYEQKSSDVTI 182
+ + T G R VRM N D L S+D T+
Sbjct: 221 VQTGYCVKTFT-GHREWVRMVRPNQDGT-LIASCSNDQTV 258
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 47 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 107 SCKLTVPTYE 116
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 51 (23.0 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H S VT + S ++SA D + +WD
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Score = 37 (18.1 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 240 (89.5 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 504 KHEDKI----WALAVGKKTEMFATG 524
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 228 (85.3 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 374
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 375 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 431
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 432 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 492 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 353 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 402
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 520 MFATGGSDALVNLWHDST 537
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 184 (69.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 1 MFALLEGA--DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 58
+F+++ A D + VWD + G KGH V I F D LL S S D T+++
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF--DHSGKLLASCSADMTIKL 176
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C T +
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-- 234
Query: 119 EAVCAIPPGSAFDSFLSSYNQQTIK 143
E V + P S N QT++
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVR 259
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCV 227
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H V + DG+ + S D+ V +W + CK + +E V + P
Sbjct: 228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 172
S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 288 SSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
LL G+ D+ + +WDV G C GH V +LFH + + S +DD T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYK 368
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 163 (62.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH+ V+ ++FHP S++ S S+DAT++VWD TL H V ++ G
Sbjct: 106 GHRSPVTRVIFHPVF--SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK--K 144
L S D + LWD + + C T+ ++ V +V +P G D +S+ +TIK +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG---DHIVSASRDKTIKMWE 220
Query: 145 KRRSLEIHFITVGERGIVRMW--NADSACLYEQKSSDVTI 182
+ + T G R VRM N D L S+D T+
Sbjct: 221 VQTGYCVKTFT-GHREWVRMVRPNQDGT-LIASCSNDQTV 258
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 47 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 107 SCKLTVPTYE 116
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 51 (23.0 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H S VT + S ++SA D + +WD
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Score = 37 (18.1 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 240 (89.5 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 504 KHEDKI----WALAVGKKTEMFATG 524
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 228 (85.3 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 374
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 375 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 431
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 432 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 492 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 353 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 402
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 520 MFATGGSDALVNLWHDST 537
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 184 (69.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 1 MFALLEGA--DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 58
+F+++ A D + VWD + G KGH V I F D LL S S D T+++
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF--DHSGKLLASCSADMTIKL 176
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C T +
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-- 234
Query: 119 EAVCAIPPGSAFDSFLSSYNQQTIK 143
E V + P S N QT++
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVR 259
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCV 227
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H V + DG+ + S D+ V +W + CK + +E V + P
Sbjct: 228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 172
S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 288 SSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
LL G+ D+ + +WDV G C GH V +LFH + + S +DD T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYK 368
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 163 (62.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH+ V+ ++FHP S++ S S+DAT++VWD TL H V ++ G
Sbjct: 106 GHRSPVTRVIFHPVF--SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK--K 144
L S D + LWD + + C T+ ++ V +V +P G D +S+ +TIK +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG---DHIVSASRDKTIKMWE 220
Query: 145 KRRSLEIHFITVGERGIVRMW--NADSACLYEQKSSDVTI 182
+ + T G R VRM N D L S+D T+
Sbjct: 221 VQTGYCVKTFT-GHREWVRMVRPNQDGT-LIASCSNDQTV 258
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 47 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 107 SCKLTVPTYE 116
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 51 (23.0 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H S VT + S ++SA D + +WD
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Score = 37 (18.1 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 240 (89.5 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 504 KHEDKI----WALAVGKKTEMFATG 524
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 228 (85.3 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 374
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 375 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 431
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 432 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 492 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 353 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 402
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 520 MFATGGSDALVNLWHDST 537
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 184 (69.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 1 MFALLEGA--DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 58
+F+++ A D + VWD + G KGH V I F D LL S S D T+++
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF--DHSGKLLASCSADMTIKL 176
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C T +
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-- 234
Query: 119 EAVCAIPPGSAFDSFLSSYNQQTIK 143
E V + P S N QT++
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVR 259
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCV 227
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H V + DG+ + S D+ V +W + CK + +E V + P
Sbjct: 228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 172
S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 288 SSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
LL G+ D+ + +WDV G C GH V +LFH + + S +DD T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYK 368
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 163 (62.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH+ V+ ++FHP S++ S S+DAT++VWD TL H V ++ G
Sbjct: 106 GHRSPVTRVIFHPVF--SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK--K 144
L S D + LWD + + C T+ ++ V +V +P G D +S+ +TIK +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG---DHIVSASRDKTIKMWE 220
Query: 145 KRRSLEIHFITVGERGIVRMW--NADSACLYEQKSSDVTI 182
+ + T G R VRM N D L S+D T+
Sbjct: 221 VQTGYCVKTFT-GHREWVRMVRPNQDGT-LIASCSNDQTV 258
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 47 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 107 SCKLTVPTYE 116
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 51 (23.0 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H S VT + S ++SA D + +WD
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Score = 37 (18.1 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 240 (89.5 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 504 KHEDKI----WALAVGKKTEMFATG 524
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 228 (85.3 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 374
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 375 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 431
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 432 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 492 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 353 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 402
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 520 MFATGGSDALVNLWHDST 537
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 184 (69.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 1 MFALLEGA--DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 58
+F+++ A D + VWD + G KGH V I F D LL S S D T+++
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF--DHSGKLLASCSADMTIKL 176
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C T +
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-- 234
Query: 119 EAVCAIPPGSAFDSFLSSYNQQTIK 143
E V + P S N QT++
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVR 259
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCV 227
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H V + DG+ + S D+ V +W + CK + +E V + P
Sbjct: 228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 172
S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 288 SSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
LL G+ D+ + +WDV G C GH V +LFH + + S +DD T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYK 368
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 163 (62.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH+ V+ ++FHP S++ S S+DAT++VWD TL H V ++ G
Sbjct: 106 GHRSPVTRVIFHPVF--SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK--K 144
L S D + LWD + + C T+ ++ V +V +P G D +S+ +TIK +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG---DHIVSASRDKTIKMWE 220
Query: 145 KRRSLEIHFITVGERGIVRMW--NADSACLYEQKSSDVTI 182
+ + T G R VRM N D L S+D T+
Sbjct: 221 VQTGYCVKTFT-GHREWVRMVRPNQDGT-LIASCSNDQTV 258
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 47 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 107 SCKLTVPTYE 116
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 51 (23.0 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H S VT + S ++SA D + +WD
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Score = 37 (18.1 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 240 (89.5 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 504 KHEDKI----WALAVGKKTEMFATG 524
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 228 (85.3 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 374
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 375 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 431
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 432 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 492 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 353 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 402
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 520 MFATGGSDALVNLWHDST 537
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 184 (69.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 1 MFALLEGA--DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 58
+F+++ A D + VWD + G KGH V I F D LL S S D T+++
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF--DHSGKLLASCSADMTIKL 176
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C T +
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-- 234
Query: 119 EAVCAIPPGSAFDSFLSSYNQQTIK 143
E V + P S N QT++
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVR 259
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCV 227
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H V + DG+ + S D+ V +W + CK + +E V + P
Sbjct: 228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 172
S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 288 SSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
LL G+ D+ + +WDV G C GH V +LFH + + S +DD T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYK 368
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 163 (62.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH+ V+ ++FHP S++ S S+DAT++VWD TL H V ++ G
Sbjct: 106 GHRSPVTRVIFHPVF--SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK--K 144
L S D + LWD + + C T+ ++ V +V +P G D +S+ +TIK +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG---DHIVSASRDKTIKMWE 220
Query: 145 KRRSLEIHFITVGERGIVRMW--NADSACLYEQKSSDVTI 182
+ + T G R VRM N D L S+D T+
Sbjct: 221 VQTGYCVKTFT-GHREWVRMVRPNQDGT-LIASCSNDQTV 258
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 47 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 107 SCKLTVPTYE 116
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 51 (23.0 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H S VT + S ++SA D + +WD
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Score = 37 (18.1 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 240 (89.5 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 504 KHEDKI----WALAVGKKTEMFATG 524
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 228 (85.3 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 374
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 375 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 431
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 432 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 492 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 353 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 402
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 520 MFATGGSDALVNLWHDST 537
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 184 (69.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 1 MFALLEGA--DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 58
+F+++ A D + VWD + G KGH V I F D LL S S D T+++
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF--DHSGKLLASCSADMTIKL 176
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C T +
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-- 234
Query: 119 EAVCAIPPGSAFDSFLSSYNQQTIK 143
E V + P S N QT++
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVR 259
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCV 227
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H V + DG+ + S D+ V +W + CK + +E V + P
Sbjct: 228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 172
S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 288 SSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
LL G+ D+ + +WDV G C GH V +LFH + + S +DD T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYK 368
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 163 (62.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH+ V+ ++FHP S++ S S+DAT++VWD TL H V ++ G
Sbjct: 106 GHRSPVTRVIFHPVF--SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK--K 144
L S D + LWD + + C T+ ++ V +V +P G D +S+ +TIK +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG---DHIVSASRDKTIKMWE 220
Query: 145 KRRSLEIHFITVGERGIVRMW--NADSACLYEQKSSDVTI 182
+ + T G R VRM N D L S+D T+
Sbjct: 221 VQTGYCVKTFT-GHREWVRMVRPNQDGT-LIASCSNDQTV 258
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 47 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 107 SCKLTVPTYE 116
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 51 (23.0 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H S VT + S ++SA D + +WD
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Score = 37 (18.1 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 240 (89.5 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 504 KHEDKI----WALAVGKKTEMFATG 524
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 228 (85.3 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 374
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 375 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 431
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 432 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 492 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 353 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 402
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 520 MFATGGSDALVNLWHDST 537
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 184 (69.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 1 MFALLEGA--DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 58
+F+++ A D + VWD + G KGH V I F D LL S S D T+++
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF--DHSGKLLASCSADMTIKL 176
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C T +
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-- 234
Query: 119 EAVCAIPPGSAFDSFLSSYNQQTIK 143
E V + P S N QT++
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVR 259
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCV 227
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H V + DG+ + S D+ V +W + CK + +E V + P
Sbjct: 228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 172
S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 288 SSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
LL G+ D+ + +WDV G C GH V +LFH + + S +DD T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYK 368
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 163 (62.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH+ V+ ++FHP S++ S S+DAT++VWD TL H V ++ G
Sbjct: 106 GHRSPVTRVIFHPVF--SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK--K 144
L S D + LWD + + C T+ ++ V +V +P G D +S+ +TIK +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG---DHIVSASRDKTIKMWE 220
Query: 145 KRRSLEIHFITVGERGIVRMW--NADSACLYEQKSSDVTI 182
+ + T G R VRM N D L S+D T+
Sbjct: 221 VQTGYCVKTFT-GHREWVRMVRPNQDGT-LIASCSNDQTV 258
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 47 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 107 SCKLTVPTYE 116
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 51 (23.0 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H S VT + S ++SA D + +WD
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Score = 37 (18.1 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 241 (89.9 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 84/322 (26%), Positives = 138/322 (42%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
K G+ ++ L+F E+ LA + ++++D + L GH + CL
Sbjct: 343 KTFKGHTNGVMCLQF---EDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQ--- 396
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
K+ ++GS D ++++W+ + C+ TGH G V + F + L SGS D T+
Sbjct: 397 FDDTKL--ISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDASI---LASGSVDKTV 451
Query: 353 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 412
K+W+F+ S +L+ H +N++ V + V + S D T +W L
Sbjct: 452 KIWNFEDKST-----FSLRG------HTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTK 500
Query: 413 VSVVTFRGHKRGIWSV-------EFSPVDQV-----VITASGDKTIKIWSISDGSCLKTF 460
+ TF GH + V EF D + T SGD SI L+
Sbjct: 501 TCIRTFHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSGDADPP--SIQASMGLEPN 558
Query: 461 EGHT-SSVLRASFLT-RGAQ---IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVG 515
++ SS SF R A +V+ D ++LW TG C+ T+ H + +WAL G
Sbjct: 559 AAYSQSSAFGTSFDNGRAAPPRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWAL--G 616
Query: 516 KKTEMFATGGSDALVNLWHDST 537
T +G D ++ +W T
Sbjct: 617 ADTLRIVSGAEDRMIKIWDPRT 638
Score = 200 (75.5 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 81/347 (23%), Positives = 145/347 (41%)
Query: 204 GLLCVTADQQLLL---Y-TTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVAT 259
G++C+ + +L Y TT+++ + + L + L G+ I L+F ++ L +
Sbjct: 351 GVMCLQFEDNILATGSYDTTIKIWDTETGEEL-RTLRGHESGIRCLQF---DDTKLISGS 406
Query: 260 NIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC 319
++V++ + C GH V+ L A ++ +GS D +V++W+ E +
Sbjct: 407 MDRTIKVWNWRTGECISTYTGHRGGVIGLHFDAS-----ILASGSVDKTVKIWNFEDKST 461
Query: 320 VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD---------GLSDDAEQPMNL 370
+ GH V AV + + S S D T+++W D G +Q + L
Sbjct: 462 FSL-RGHTDWVNAVRVDTSSRT-VFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVPL 519
Query: 371 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 430
+ H A ND L T + L + + + F
Sbjct: 520 PREFEFEEHD------AECENDDLSTTSGDADPPSIQASMGLEPNAAYS--QSSAFGTSF 571
Query: 431 ----SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADG 486
+ + ++T++ D TI++W + G CL+TF GH V T +IVS D
Sbjct: 572 DNGRAAPPRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGADT--LRIVSGAEDR 629
Query: 487 LVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
++K+W RTG+C T+ H + + +G FATG D V ++
Sbjct: 630 MIKIWDPRTGKCERTFTGHSGPVTCIGLGDSR--FATGSEDCEVRMY 674
Score = 198 (74.8 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 42/121 (34%), Positives = 62/121 (51%)
Query: 414 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 473
S+ TF+GH G+ ++F D ++ T S D TIKIW G L+T GH S + F
Sbjct: 341 SIKTFKGHTNGVMCLQFE--DNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQF- 397
Query: 474 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+++S D +K+W RTGECI+TY H + L + A+G D V +W
Sbjct: 398 -DDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFD--ASILASGSVDKTVKIW 454
Query: 534 H 534
+
Sbjct: 455 N 455
Score = 154 (59.3 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 42/130 (32%), Positives = 64/130 (49%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
L+ G+ DR + VW+ G C + GH+G V + F D S+L SGS D TV++W+
Sbjct: 402 LISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF----DASILASGSVDKTVKIWNF- 456
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAV 121
K +L H V ++ + + T+ SA D V LWDL +C T + V+ V
Sbjct: 457 EDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQV 516
Query: 122 CAIPPGSAFD 131
+P F+
Sbjct: 517 VPLPREFEFE 526
Score = 131 (51.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD + G +GH+ + + F D + L SGS D T++VW+ +C++
Sbjct: 368 DTTIKIWDTETGEELRTLRGHESGIRCLQF----DDTKLISGSMDRTIKVWNWRTGECIS 423
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 107
T H V + D S L S DK V +W+ D S
Sbjct: 424 TYTGHRGGVIGLHF--DASILASGSVDKTVKIWNFEDKS 460
Score = 108 (43.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 20 GFCT-HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVT 78
G C+ FKGH V + F + ++L +GS D T+++WD + + TL H S +
Sbjct: 338 GRCSIKTFKGHTNGVMCLQF----EDNILATGSYDTTIKIWDTETGEELRTLRGHESGIR 393
Query: 79 SMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY 115
+ D + LIS D+ + +W+ R C + TY
Sbjct: 394 CLQF--DDTKLISGSMDRTIKVWNWRTGEC---ISTY 425
Score = 64 (27.6 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 17/69 (24%), Positives = 29/69 (42%)
Query: 248 LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDN 307
LG + + ++++D + C GHS V C+ G TGS+D
Sbjct: 615 LGADTLRIVSGAEDRMIKIWDPRTGKCERTFTGHSGPVTCIGL-----GDSRFATGSEDC 669
Query: 308 SVRLWDSES 316
VR++ +S
Sbjct: 670 EVRMYSFQS 678
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 240 (89.5 bits), Expect = 9.4e-17, P = 9.4e-17
Identities = 70/284 (24%), Positives = 125/284 (44%)
Query: 274 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT--------- 324
C + + + CLD S +L+ G +++ +R+W + + +
Sbjct: 245 CMFTFHNTYDGINCLD---FSDDNLLVAAGMQESYIRVWSLDGKKIPSDDSADEPPTNSR 301
Query: 325 ---GHMGAVGAVAFSKKL---QN--------FLVSGSSDHTIKVWSFDGLSDDAEQPMNL 370
GH G V AVAF+ +N +L+S S+D TI++WS D Q M
Sbjct: 302 RLIGHSGPVYAVAFAPSATPSENAVAPTNARWLLSSSADRTIRLWSLD-----LWQCM-- 354
Query: 371 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 430
V H + + L P +G D+TA +W + F GH++ + V F
Sbjct: 355 ---VVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDHIRQQRIFVGHEQDVDCVCF 411
Query: 431 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 490
P V T S D+T+++W+++ G+ ++ F GHT ++ + G + S G + L
Sbjct: 412 HPNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTLASADDHGSILL 471
Query: 491 WTVRTGECIATYDKH-EDKIWALAVGKKTEMFATGGSDALVNLW 533
W + G + H + IW+L+ ++ + +GG+D V +W
Sbjct: 472 WDLGPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGGADGTVRVW 515
Score = 212 (79.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 53/195 (27%), Positives = 92/195 (47%)
Query: 300 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+++ S D ++RLW + C+ V GH V + + ++ VSG D T ++W D
Sbjct: 334 LLSSSADRTIRLWSLDLWQCMVVYKGHDQPVWDLQWGP-FGHYFVSGGHDKTARLWVTD- 391
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
+++ + + H +D++ + PN + V TGS DRT +W + +V F
Sbjct: 392 ---------HIRQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNAVRMFT 442
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGH-TSSVLRASFLTRGAQ 478
GH I ++ S + + +A +I +W + G LK GH + S+
Sbjct: 443 GHTGNITALACSRDGKTLASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNV 502
Query: 479 IVSCGADGLVKLWTV 493
+VS GADG V++W V
Sbjct: 503 LVSGGADGTVRVWDV 517
Score = 152 (58.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 46/189 (24%), Positives = 81/189 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++++ L C V GH + V L V+G D + RLW ++ +
Sbjct: 343 IRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGH---YFVSGGHDKTARLWVTDHIRQQRIF 399
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
GH V V F ++ +GSSD T+++W A N A + H +I
Sbjct: 400 VGHEQDVDCVCFHPN-SAYVFTGSSDRTVRMW--------AVTTGN--AVRMFTGHTGNI 448
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGH-KRGIWSVEFSPVDQVVITASG 442
+LA + + + + + +W L + RGH K GIWS+ +S V+++
Sbjct: 449 TALACSRDGKTLASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGGA 508
Query: 443 DKTIKIWSI 451
D T+++W +
Sbjct: 509 DGTVRVWDV 517
Score = 150 (57.9 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D+ +W D F GH+ V + FHP++ + +F+GS D TVR+W +
Sbjct: 380 GHDKTARLWVTDHIRQQRIFVGHEQDVDCVCFHPNS--AYVFTGSSDRTVRMWAVTTGNA 437
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
V H +T++A + DG TL SA + LWDL
Sbjct: 438 VRMFTGHTGNITALACSRDGKTLASADDHGSILLWDL 474
Score = 47 (21.6 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 43 DKSLLFSGSDDATVRVWDLLAKK 65
D L+ +G ++ +RVW L KK
Sbjct: 264 DNLLVAAGMQESYIRVWSLDGKK 286
Score = 43 (20.2 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 66 CVATLDKHFSRVTSMAITSDGSTLISAG-RDKVVNLWDL 103
C+ T + + + SD + L++AG ++ + +W L
Sbjct: 245 CMFTFHNTYDGINCLDF-SDDNLLVAAGMQESYIRVWSL 282
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 240 (89.5 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 383
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 384 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 443
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 EDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 444 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 503
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 504 KHEDKI----WALAVGKKTEMFATG 524
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 227 (85.0 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 264 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 323
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVE--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 324 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 374
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 375 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 431
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 432 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 492 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 217 (81.4 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 292
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVEDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 293 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 352
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 353 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 402
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 403 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 462
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 463 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 209 (78.6 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 373 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 432
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDH 160
Query: 433 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 492
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 493 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 201 (75.8 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 520 MFATGGSDALVNLWHDST 537
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 184 (69.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 45/145 (31%), Positives = 71/145 (48%)
Query: 1 MFALLEGA--DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 58
+F+++ A D + VWD + G KGH V I F D LL S S D T+++
Sbjct: 119 VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISF--DHSGKLLASCSADMTIKL 176
Query: 59 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 118
WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C T +
Sbjct: 177 WDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-- 234
Query: 119 EAVCAIPPGSAFDSFLSSYNQQTIK 143
E V + P S N QT++
Sbjct: 235 EWVRMVRPNQDGTLIASCSNDQTVR 259
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 8 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 67
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCV 227
Query: 68 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 127
T H V + DG+ + S D+ V +W + CK + +E V + P
Sbjct: 228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 128 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 172
S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 288 SSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
LL G+ D+ + +WDV G C GH V +LFH + + S +DD T+RVWD
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYK 368
Query: 63 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 163 (62.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH+ V+ ++FHP S++ S S+DAT++VWD TL H V ++ G
Sbjct: 106 GHRSPVTRVIFHPVF--SVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK--K 144
L S D + LWD + + C T+ ++ V +V +P G D +S+ +TIK +
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG---DHIVSASRDKTIKMWE 220
Query: 145 KRRSLEIHFITVGERGIVRMW--NADSACLYEQKSSDVTI 182
+ + T G R VRM N D L S+D T+
Sbjct: 221 VQTGYCVKTFT-GHREWVRMVRPNQDGT-LIASCSNDQTV 258
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 47 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 106
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 107 SCKLTVPTYE 116
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 51 (23.0 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 102
L H S VT + S ++SA D + +WD
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD 136
Score = 37 (18.1 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 515 GKKTEMFATGGSDALVNLWHDST 537
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 241 (89.9 bits), Expect = 9.6e-17, P = 9.6e-17
Identities = 75/304 (24%), Positives = 138/304 (45%)
Query: 233 KRLVGYNEEILDLKFLGEEEQYLAVATNIE--QVQVYDLSSMSCSYVLAGHSEIVLCLDT 290
+ +V ++ + L LG+ L +AT E +V ++ +S +C L GH+ V C+
Sbjct: 14 QEIVAHSSNVSSL-VLGKSSGRL-LATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQ- 70
Query: 291 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
+S + +V GS S+RLWD E+ + GH ++ ++ F + +L SGS D
Sbjct: 71 --FNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHP-MGEYLASGSVDS 127
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
IK+W D + + K H + + LA +P+ + + S D T +W L
Sbjct: 128 NIKLW------DVRRKGCVFRYKG----HTQAVRCLAFSPDGKWLASASDDSTVKLWDLI 177
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 470
+ F H + V+F P + ++ + S D+T+K+W + + + + EG T V
Sbjct: 178 AGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSV 237
Query: 471 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 530
F G+ + S G++ ++++ C K+ LA+ +M A S V
Sbjct: 238 LFNPDGSCLYS-GSENTLRVYGWEPDRCFDVVHVGWGKVSDLAISNN-QMIAVSYSHTNV 295
Query: 531 NLWH 534
+ W+
Sbjct: 296 S-WY 298
Score = 182 (69.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 51/178 (28%), Positives = 78/178 (43%)
Query: 14 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 73
+WD++ GHK +SS+ FHP + L SGS D+ +++WD+ K CV H
Sbjct: 89 LWDLEAAKILRTLMGHKASISSLDFHPMGE--YLASGSVDSNIKLWDVRRKGCVFRYKGH 146
Query: 74 FSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSF 133
V +A + DG L SA D V LWDL ++ V P
Sbjct: 147 TQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYL--L 204
Query: 134 LSSYNQQTIKK-KRRSLEIHFITVGERGIVR--MWNADSACLYEQKSSDVTI-SFEMD 187
S +T+K + + GE G+VR ++N D +CLY + + + +E D
Sbjct: 205 ASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYGWEPD 262
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/137 (27%), Positives = 59/137 (43%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D +V +W V C GH V I F+ ++ + +GS ++R+WDL A K
Sbjct: 40 GEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEER--VVAGSLSGSLRLWDLEAAKI 97
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 126
+ TL H + ++S+ G L S D + LWD+R C + A P
Sbjct: 98 LRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSP 157
Query: 127 GSAFDSFLSSYNQQTIK 143
+ S+ + T+K
Sbjct: 158 DGKW--LASASDDSTVK 172
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 148 (57.2 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 35/124 (28%), Positives = 63/124 (50%)
Query: 412 LVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVL 468
+V V +GH RG+ W+ F P ++++ + D+ +KIW +++ L T GH ++V
Sbjct: 196 VVKHVLEQGHDRGVNWAA-FHPSMPLIVSGADDRQVKIWRMNESKAWELDTCRGHYNNVS 254
Query: 469 RASFLTRGAQIVSCGADGLVKLWTV--RTGECIATYDKHEDKIWALAVGKKTEMFATGGS 526
A F R I+S D +++W + RTG + T+ + D+ W L +FA G
Sbjct: 255 CAVFHPRQELILSNSEDKSIRVWDMSKRTG--VQTFRRDHDRFWVLGAHPNLNLFAAGHD 312
Query: 527 DALV 530
++
Sbjct: 313 SGML 316
Score = 141 (54.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 57/235 (24%), Positives = 94/235 (40%)
Query: 301 VTGSKDNSV-RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 359
+ S N V +LWD + H G V + F K+ Q VSG D+ IKVW++
Sbjct: 24 ILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYK- 81
Query: 360 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 419
L + + H I + + + S D+T +W V
Sbjct: 82 LR---------RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRTCVCVLT 132
Query: 420 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE-GHTSSVLRASFLTRGAQ 478
GH + +F P + +V++AS D+T+++W IS G K G + +R G
Sbjct: 133 GHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS-GLRKKNLSPGAVDTEVRG---ISGVD 188
Query: 479 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 533
+ +D +VK + G +D+ + WA A + +G D V +W
Sbjct: 189 LFGA-SDAVVK-HVLEQG-----HDRGVN--WA-AFHPSMPLIVSGADDRQVKIW 233
Score = 130 (50.8 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 263 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 322
+++V++ C + L GH + + T I++ S D ++R+W+ +SR CV V
Sbjct: 74 KIKVWNYKLRRCLFTLLGHLDYIR---TTFFHHEYPWILSASDDQTIRIWNWQSRTCVCV 130
Query: 323 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 360
TGH V F ++ +VS S D T++VW GL
Sbjct: 131 LTGHNHYVMCAQFHPS-EDLVVSASLDQTVRVWDISGL 167
Score = 130 (50.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 28/97 (28%), Positives = 44/97 (45%)
Query: 7 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 66
G D K+ VW+ C GH + + FH + + S SDD T+R+W+ ++ C
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRIWNWQSRTC 127
Query: 67 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 103
V L H V ++SA D+ V +WD+
Sbjct: 128 VCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 127 (49.8 bits), Expect = 0.00046, P = 0.00046
Identities = 62/269 (23%), Positives = 116/269 (43%)
Query: 12 VLVWDVDGGFCT--HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVAT 69
+ +WD CT F H G V I FH + L SG DD ++VW+ ++C+ T
Sbjct: 33 IQLWDYR--MCTLIDKFDEHDGPVRGIDFHKQ--QPLFVSGGDDYKIKVWNYKLRRCLFT 88
Query: 70 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGS 128
L H + + + ++SA D+ + +W+ + +C + V T +CA P
Sbjct: 89 LLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRTC-VCVLTGHNHYVMCAQFHPSE 147
Query: 129 AFDSFLSSYNQQTIKK------KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTI 182
D +S+ QT++ ++++L + RGI D L+ +SD +
Sbjct: 148 --DLVVSASLDQTVRVWDISGLRKKNLSPGAVDTEVRGIS---GVD---LFG--ASDAVV 197
Query: 183 SFEMDDSK-RGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE 241
++ RG A PS ++ D+Q+ ++ E K EL + G+
Sbjct: 198 KHVLEQGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNE--SKAWELDTCR---GHYNN 252
Query: 242 ILDLKFLGEEEQYLAVATNIEQVQVYDLS 270
+ F +E L+ + + + ++V+D+S
Sbjct: 253 VSCAVFHPRQELILSNSED-KSIRVWDMS 280
Score = 96 (38.9 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 22/79 (27%), Positives = 43/79 (54%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 294
L+G+ + I F E ++ A++ + +++++ S +C VL GH+ V+C
Sbjct: 89 LLGHLDYIRTT-FFHHEYPWILSASDDQTIRIWNWQSRTCVCVLTGHNHYVMCAQ---FH 144
Query: 295 SGKILIVTGSKDNSVRLWD 313
+ L+V+ S D +VR+WD
Sbjct: 145 PSEDLVVSASLDQTVRVWD 163
Score = 91 (37.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 261 IEQVQVYDLSSMSCSYVLA-GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRC 318
I V ++ S +VL GH V + A LIV+G+ D V++W +ES+
Sbjct: 184 ISGVDLFGASDAVVKHVLEQGHDRGV---NWAAFHPSMPLIVSGADDRQVKIWRMNESKA 240
Query: 319 C-VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 355
+ GH V F + Q ++S S D +I+VW
Sbjct: 241 WELDTCRGHYNNVSCAVFHPR-QELILSNSEDKSIRVW 277
Score = 88 (36.0 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 26/109 (23%), Positives = 46/109 (42%)
Query: 325 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 384
GH V AF + +VSG+ D +K+W +++ ++ H +++
Sbjct: 204 GHDRGVNWAAFHPSMP-LIVSGADDRQVKIWR---MNESKAWELD-----TCRGHYNNVS 254
Query: 385 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR-GHKRGIWSVEFSP 432
P L+ + S+D++ VW + V TFR H R W + P
Sbjct: 255 CAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDR-FWVLGAHP 302
Score = 69 (29.3 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 16/87 (18%), Positives = 34/87 (39%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
F+ V + FHP + + + + +++WD + D+H V +
Sbjct: 5 FETKSARVKGLSFHPK--RPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQ 62
Query: 86 GSTLISAGRDKVVNLWDLRDYSCKLTV 112
+S G D + +W+ + C T+
Sbjct: 63 QPLFVSGGDDYKIKVWNYKLRRCLFTL 89
Score = 58 (25.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 280 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 324
GH V C + LI++ S+D S+R+WD R GV T
Sbjct: 248 GHYNNVSC---AVFHPRQELILSNSEDKSIRVWDMSKR--TGVQT 287
Score = 38 (18.4 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 9 DRKVLVWDVDG 19
D+ V VWD+ G
Sbjct: 156 DQTVRVWDISG 166
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 238 (88.8 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 71/249 (28%), Positives = 115/249 (46%)
Query: 290 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 349
TC G I T S D ++++W+S++ + + H V +A S L + D
Sbjct: 286 TCVRWGGTGKIYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDF--ILRTAYHD 343
Query: 350 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 409
HT KV DA++ K + AA IN+ V + LV + S D T +W
Sbjct: 344 HTGKV-----PESDADKVAMAKKRFEKAA---TINNKIV---EKLV-SASDDFTMYLWD- 390
Query: 410 PDLVS--VVTFRGHKRGIWSVEFSPVDQVVITASG-DKTIKIWSISDGSCLKTFEGHTSS 466
P+ S V GH++ + V FSP D I ++G D +K+W+ DG + T GH +
Sbjct: 391 PESSSKPVARLLGHQKEVNHVTFSP-DMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGA 449
Query: 467 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 526
V + F +VS D +K+W VRTG+ H+D+++A+ + +GG
Sbjct: 450 VYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGK 509
Query: 527 DALVNLWHD 535
D + +W +
Sbjct: 510 DKAIRIWRN 518
Score = 204 (76.9 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 90/369 (24%), Positives = 158/369 (42%)
Query: 4 LLEGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 62
++ G+ D +WD D G H KGH V ++ + P+ +++ +GS D TVR+WD
Sbjct: 164 MVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNG--AMIATGSMDNTVRIWDAK 221
Query: 63 AKKCV-ATLDKHFSRVTSMA-----ITSDGST-LISAGRDKVVNLWDLRDYSCKLTVPTY 115
+ + A L H +TS+A + G L SA +D V +WD+ + + +
Sbjct: 222 KGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGH 281
Query: 116 EMVEAVCAIPPG------SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADS 169
+ C G S+ D + +N QT ++L H V + + +
Sbjct: 282 KG-SVTCVRWGGTGKIYTSSHDRTIKVWNSQT-GTLIQTLSAHAHRVNHLALSTDFILRT 339
Query: 170 ACLYEQKSSDVTISFEMDD---SKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKK 226
A Y + V S + D +K+ F A + + V+A +Y + PE
Sbjct: 340 A--YHDHTGKVPES-DADKVAMAKKRFEKAATINNKIVEKLVSASDDFTMY--LWDPESS 394
Query: 227 MELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVL 286
+ + RL+G+ +E+ + F + Y+A A V++++ L GH V
Sbjct: 395 SKPVA--RLLGHQKEVNHVTF-SPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVY 451
Query: 287 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 346
C S+ L+V+ SKD ++++W+ + GH V AV +S Q + SG
Sbjct: 452 ---QCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQK-VGSG 507
Query: 347 SSDHTIKVW 355
D I++W
Sbjct: 508 GKDKAIRIW 516
Score = 196 (74.1 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 79/309 (25%), Positives = 133/309 (43%)
Query: 235 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSS-MSCSYVLAGHSEIVLCL--DTC 291
L G+ +L + + +A + V+++D + L GH + + L +
Sbjct: 187 LKGHTSWVLAVSY-SPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPY 245
Query: 292 ALS-SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 350
L SG + + SKD++VR+WD S+ V +GH G+V V + + + + S D
Sbjct: 246 HLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK--IYTSSHDR 303
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
TIKVW+ Q L ++AH +N LA++ D ++ T D T V
Sbjct: 304 TIKVWN--------SQTGTLIQ--TLSAHAHRVNHLALS-TDFILRTAYHDHTGKVPESD 352
Query: 411 -DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC-LKTFEGHTSSVL 468
D V++ R K ++ V+++V +AS D T+ +W S + GH V
Sbjct: 353 ADKVAMAKKRFEKAA--TINNKIVEKLV-SASDDFTMYLWDPESSSKPVARLLGHQKEVN 409
Query: 469 RASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 528
+F A I S G D VKLW R G+ I T H ++ + + + D
Sbjct: 410 HVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDT 469
Query: 529 LVNLWHDST 537
+ +W+ T
Sbjct: 470 TLKVWNVRT 478
Score = 185 (70.2 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 94/404 (23%), Positives = 163/404 (40%)
Query: 22 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 81
C+ GH + + F P S + SGS D+T R+WD + TL H S V +++
Sbjct: 140 CSASIAGHGEAILATSFSP-VSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVS 198
Query: 82 ITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIP--P----GSAFDSFLS 135
+ +G+ + + D V +WD + L P V+ + ++ P S S
Sbjct: 199 YSPNGAMIATGSMDNTVRIWDAKKGQA-LGAPLKGHVKWITSLAWEPYHLQQSGHPRLAS 257
Query: 136 SYNQQTIKK-KRRSLEIHFITVGERGIVRM--WNADSACLYEQKSSDVTISFEMDDSKRG 192
+ T++ S + G +G V W +Y S D TI ++ +S+ G
Sbjct: 258 ASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGK-IYTS-SHDRTI--KVWNSQTG 313
Query: 193 FTAATVLPSNQGLLCVTADQQLLLYT-----TVEVPEKKMELILSKRLVGYNEEILDLKF 247
T+ + + +L T T +VPE + + + ++ K
Sbjct: 314 TLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVAMAKKRFEKAATINNKI 373
Query: 248 LGEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCALSSGKILIVTGSKD 306
+ + L A++ + ++D S S L GH + V + S I + D
Sbjct: 374 V----EKLVSASDDFTMYLWDPESSSKPVARLLGHQKEV---NHVTFSPDMAYIASAGFD 426
Query: 307 NSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF-DG-LSDDA 364
N V+LW+ + GH+GAV FS LVS S D T+KVW+ G LS+D
Sbjct: 427 NHVKLWNGRDGKFITTLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVWNVRTGKLSED- 484
Query: 365 EQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR 408
+ H ++ ++ +P+ V +G +D+ +WR
Sbjct: 485 -----------LPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIWR 517
Score = 179 (68.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 87/368 (23%), Positives = 152/368 (41%)
Query: 183 SFEMDD--SKRGFTAATVLPSNQGLL---CVTADQQLLLYTTVE-VPEKKMELILSKRLV 236
+F+ DD SK T + LL T + + LY T + + K S +
Sbjct: 86 TFQSDDKDSKDSQTIDILADIYHSLLKPGVKTTEDTIQLYFTPQAIFRVKAVSRCSASIA 145
Query: 237 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 296
G+ E IL F + + +++D + + + L GH+ VL + + S
Sbjct: 146 GHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAV---SYSPN 202
Query: 297 KILIVTGSKDNSVRLWDSESRCCVGVGT-GHMGAVGAVAFSK-KLQNF----LVSGSSDH 350
+I TGS DN+VR+WD++ +G GH+ + ++A+ LQ L S S D
Sbjct: 203 GAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDS 262
Query: 351 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 410
T+++W D +S +A V++ H + + + T S DRT VW
Sbjct: 263 TVRIW--DVISK--------RADIVLSGHKGSVTCVRWGGTGKIY-TSSHDRTIKVWNSQ 311
Query: 411 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKI-WSISDGSCL--KTFEGHTSSV 467
+ T H + + S D ++ TA D T K+ S +D + K FE ++
Sbjct: 312 TGTLIQTLSAHAHRVNHLALS-TDFILRTAYHDHTGKVPESDADKVAMAKKRFE--KAAT 368
Query: 468 LRASFLTRGAQIVSCGADGLVKLWTVRTG-ECIATYDKHEDKIWALAVGKKTEMFATGGS 526
+ + + +VS D + LW + + +A H+ ++ + A+ G
Sbjct: 369 INNKIVEK---LVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGF 425
Query: 527 DALVNLWH 534
D V LW+
Sbjct: 426 DNHVKLWN 433
Score = 167 (63.8 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 43/175 (24%), Positives = 78/175 (44%)
Query: 371 KAKAVVAAHGKDINSLAVAP-NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 429
+ A +A HG+ I + + +P + S + +GS D TA +W + T +GH + +V
Sbjct: 139 RCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVS 198
Query: 430 FSPVDQVVITASGDKTIKIWSISDGSCLKT-FEGH----TSSVLRASFLTRGA--QIVSC 482
+SP ++ T S D T++IW G L +GH TS L + ++ S
Sbjct: 199 YSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASA 258
Query: 483 GADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
D V++W V + H+ + + G +++ T D + +W+ T
Sbjct: 259 SKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIY-TSSHDRTIKVWNSQT 312
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 206 (77.6 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 53/172 (30%), Positives = 76/172 (44%)
Query: 323 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 382
G+GH + F L + S D TIK+W + E + L+ H
Sbjct: 398 GSGHTDWLSGCCFHPSGSK-LATSSGDSTIKLWDLN----KGECTLTLEG------HNHA 446
Query: 383 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 442
+ S V + S D T+ +W + T GH + S+EF P +++TAS
Sbjct: 447 VWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASA 506
Query: 443 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 494
DKT+ +W G C ++ GH SV A+F RG I SC A G+ KLW R
Sbjct: 507 DKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFR 558
Score = 197 (74.4 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 57/255 (22%), Positives = 106/255 (41%)
Query: 279 AGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKK 338
+GH++ L C + T S D++++LWD C GH AV + +
Sbjct: 399 SGHTD---WLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHS- 454
Query: 339 LQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTG 398
+F+ S S D T K+W + +E + + + H +NS+ P +++ T
Sbjct: 455 CGDFVASASLDMTSKIWDVN-----SE-----RCRYTLYGHTDSVNSIEFFPFSNILLTA 504
Query: 399 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 458
S D+T VW + GH + F+P ++ + K+W +
Sbjct: 505 SADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIV 564
Query: 459 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 518
+ + SS +F G + A+G++ L +++G+ I HE ++ ++
Sbjct: 565 SIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLDLKSGQ-IHKLVGHESEVHSVVFSHLG 623
Query: 519 EMFATGGSDALVNLW 533
E +GGSD + LW
Sbjct: 624 ENLYSGGSDGTIRLW 638
Score = 196 (74.1 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 59/238 (24%), Positives = 100/238 (42%)
Query: 255 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 314
LA ++ ++++DL+ C+ L GH+ V +C S + + S D + ++WD
Sbjct: 417 LATSSGDSTIKLWDLNKGECTLTLEGHNHAVW---SCTWHSCGDFVASASLDMTSKIWDV 473
Query: 315 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 374
S C GH +V ++ F N L++ S+D T+ VW D + EQ +
Sbjct: 474 NSERCRYTLYGHTDSVNSIEFFP-FSNILLTASADKTLSVW--DARTGKCEQSLY----- 525
Query: 375 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR-GHKRGIWSVEFSPV 433
H +N P ++ + +W L+ +V+ G G V F
Sbjct: 526 ---GHMHSVNDATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGN-EVNFDQS 581
Query: 434 DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 491
+V+ AS + I + + G K GH S V F G + S G+DG ++LW
Sbjct: 582 GRVLAQASANGIIHLLDLKSGQIHKLV-GHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 182 (69.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 49/194 (25%), Positives = 81/194 (41%)
Query: 340 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGS 399
+++L+S S D ++W GL N+ + H ++ P+ S + T S
Sbjct: 372 RDYLISCSED---RLWKMVGLPQG-----NVLLTG--SGHTDWLSGCCFHPSGSKLATSS 421
Query: 400 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 459
D T +W L +T GH +WS + V +AS D T KIW ++ C T
Sbjct: 422 GDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYT 481
Query: 460 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 519
GHT SV F +++ AD + +W RTG+C + H + +
Sbjct: 482 LYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGH 541
Query: 520 MFATGGSDALVNLW 533
+ A+ + + LW
Sbjct: 542 IIASCDARGVTKLW 555
Score = 176 (67.0 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 42/167 (25%), Positives = 75/167 (44%)
Query: 371 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 430
K + H ++ + + P + + S+DR + LP ++T GH + F
Sbjct: 351 KLNNIFRLHELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCF 410
Query: 431 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 490
P + T+SGD TIK+W ++ G C T EGH +V ++ + G + S D K+
Sbjct: 411 HPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKI 470
Query: 491 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 537
W V + C T H D + ++ + + T +D +++W T
Sbjct: 471 WDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDART 517
Score = 150 (57.9 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 9 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 68
D + +WD++ G CT +GH V S +H D + S S D T ++WD+ +++C
Sbjct: 423 DSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGD--FVASASLDMTSKIWDVNSERCRY 480
Query: 69 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 109
TL H V S+ + L++A DK +++WD R C+
Sbjct: 481 TLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCE 521
Score = 137 (53.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 33/103 (32%), Positives = 44/103 (42%)
Query: 2 FALLEGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 61
F D +WDV+ C + GH V+SI F P ++ +L + S D T+ VWD
Sbjct: 458 FVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSN--ILLTASADKTLSVWDA 515
Query: 62 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 104
KC +L H V T G + S V LWD R
Sbjct: 516 RTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFR 558
Score = 133 (51.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 28 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 87
GH +S FHP K L + S D+T+++WDL +C TL+ H V S S G
Sbjct: 400 GHTDWLSGCCFHPSGSK--LATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGD 457
Query: 88 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI 124
+ SA D +WD+ C+ T+ Y ++V +I
Sbjct: 458 FVASASLDMTSKIWDVNSERCRYTL--YGHTDSVNSI 492
Score = 92 (37.4 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 26/87 (29%), Positives = 39/87 (44%)
Query: 26 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 85
F+ H+ VS I+ HP D L S S+D ++ L + T H ++
Sbjct: 356 FRLHELPVSCIVMHPCRD--YLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPS 413
Query: 86 GSTLISAGRDKVVNLWDLRDYSCKLTV 112
GS L ++ D + LWDL C LT+
Sbjct: 414 GSKLATSSGDSTIKLWDLNKGECTLTL 440
WARNING: HSPs involving 1418 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 768 735 0.00087 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1668
No. of states in DFA: 620 (66 KB)
Total size of DFA: 388 KB (2188 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 61.71u 0.13s 61.84t Elapsed: 00:00:03
Total cpu time: 61.91u 0.14s 62.05t Elapsed: 00:00:03
Start: Sat May 11 12:40:03 2013 End: Sat May 11 12:40:06 2013
WARNINGS ISSUED: 2