Query 004217
Match_columns 767
No_of_seqs 530 out of 3555
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 18:00:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004217.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004217hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 1.8E-27 6.3E-32 274.7 40.7 262 71-357 61-361 (611)
2 4gqb_B Methylosome protein 50; 100.0 6.6E-27 2.3E-31 252.6 32.4 180 72-255 85-277 (344)
3 1vyh_C Platelet-activating fac 100.0 2.3E-26 8E-31 252.4 32.7 244 70-320 109-397 (410)
4 3frx_A Guanine nucleotide-bind 100.0 4.6E-26 1.6E-30 241.1 32.1 193 72-268 20-234 (319)
5 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-26 5.7E-31 250.4 27.7 268 29-354 5-302 (402)
6 3ow8_A WD repeat-containing pr 100.0 6E-26 2E-30 241.4 30.9 231 80-320 47-307 (321)
7 2ynn_A Coatomer subunit beta'; 99.9 1.2E-25 4E-30 236.0 32.5 237 72-359 16-267 (304)
8 4ery_A WD repeat-containing pr 99.9 3.6E-25 1.2E-29 230.9 35.3 243 72-320 26-296 (312)
9 3sfz_A APAF-1, apoptotic pepti 99.9 9.5E-25 3.2E-29 269.2 45.0 194 70-263 616-830 (1249)
10 3fm0_A Protein CIAO1; WDR39,SG 99.9 1E-25 3.5E-30 241.0 30.4 187 72-260 19-224 (345)
11 2xzm_R RACK1; ribosome, transl 99.9 4.6E-25 1.6E-29 235.1 33.5 177 80-261 38-244 (343)
12 1got_B GT-beta; complex (GTP-b 99.9 5.8E-25 2E-29 234.3 33.4 242 71-321 57-330 (340)
13 1vyh_C Platelet-activating fac 99.9 3.7E-25 1.3E-29 242.8 31.6 241 55-307 131-407 (410)
14 3ow8_A WD repeat-containing pr 99.9 5.9E-25 2E-29 233.8 29.0 226 70-307 81-317 (321)
15 2ymu_A WD-40 repeat protein; u 99.9 3.3E-23 1.1E-27 233.1 44.6 179 71-255 18-200 (577)
16 2ynn_A Coatomer subunit beta'; 99.9 9.8E-25 3.4E-29 229.0 29.1 189 71-262 57-260 (304)
17 4gqb_B Methylosome protein 50; 99.9 3.7E-25 1.3E-29 238.9 25.8 181 71-255 129-319 (344)
18 2pm7_B Protein transport prote 99.9 4.6E-24 1.6E-28 223.1 32.9 182 72-254 12-226 (297)
19 4e54_B DNA damage-binding prot 99.9 1.4E-24 4.8E-29 239.1 30.3 197 71-268 121-334 (435)
20 4g56_B MGC81050 protein; prote 99.9 1.2E-24 4E-29 234.8 29.1 180 72-255 97-289 (357)
21 1erj_A Transcriptional repress 99.9 2.5E-24 8.5E-29 234.3 31.4 251 71-359 66-349 (393)
22 1got_B GT-beta; complex (GTP-b 99.9 2.6E-24 8.8E-29 229.3 29.5 224 71-307 99-339 (340)
23 2pbi_B Guanine nucleotide-bind 99.9 4.4E-24 1.5E-28 229.8 31.5 245 71-322 66-345 (354)
24 3iz6_a 40S ribosomal protein R 99.9 8.5E-25 2.9E-29 236.9 24.7 248 71-320 68-361 (380)
25 2hes_X YDR267CP; beta-propelle 99.9 1.2E-23 4.1E-28 223.6 32.9 186 72-261 17-230 (330)
26 1nr0_A Actin interacting prote 99.9 1.1E-23 3.6E-28 243.3 35.0 151 72-223 150-357 (611)
27 3vl1_A 26S proteasome regulato 99.9 1.1E-23 3.9E-28 227.0 31.0 190 72-264 100-325 (420)
28 3frx_A Guanine nucleotide-bind 99.9 7.7E-24 2.6E-28 224.0 28.8 185 71-260 67-266 (319)
29 3ei3_B DNA damage-binding prot 99.9 4.1E-23 1.4E-27 221.2 34.0 246 71-320 75-369 (383)
30 1erj_A Transcriptional repress 99.9 2.2E-23 7.4E-28 226.9 31.6 193 72-265 126-345 (393)
31 2pbi_B Guanine nucleotide-bind 99.9 1.2E-23 4.3E-28 226.2 27.6 180 72-255 157-346 (354)
32 3jrp_A Fusion protein of prote 99.9 4.8E-23 1.6E-27 216.8 31.1 244 71-358 13-294 (379)
33 1gxr_A ESG1, transducin-like e 99.9 1.3E-22 4.4E-27 210.0 33.5 180 71-255 99-285 (337)
34 1pgu_A Actin interacting prote 99.9 2.7E-22 9.3E-27 225.8 38.9 184 72-262 67-284 (615)
35 3bg1_A Protein SEC13 homolog; 99.9 4.6E-24 1.6E-28 225.4 22.9 183 72-254 16-235 (316)
36 2ymu_A WD-40 repeat protein; u 99.9 5.3E-23 1.8E-27 231.5 31.9 213 71-321 346-567 (577)
37 4g56_B MGC81050 protein; prote 99.9 1.5E-23 5.2E-28 226.1 26.2 240 70-359 43-309 (357)
38 3zwl_B Eukaryotic translation 99.9 5E-23 1.7E-27 215.4 29.3 193 72-269 35-257 (369)
39 3dwl_C Actin-related protein 2 99.9 2.5E-24 8.6E-29 229.2 19.2 189 72-262 14-237 (377)
40 1pgu_A Actin interacting prote 99.9 6.7E-22 2.3E-26 222.6 40.0 236 72-359 21-291 (615)
41 3f3f_A Nucleoporin SEH1; struc 99.9 3.2E-23 1.1E-27 213.3 26.6 267 71-359 13-345 (351)
42 4aow_A Guanine nucleotide-bind 99.9 2E-22 6.7E-27 209.8 32.6 261 72-353 41-339 (340)
43 3dm0_A Maltose-binding peripla 99.9 7.2E-23 2.5E-27 239.0 32.3 233 72-358 385-639 (694)
44 1gxr_A ESG1, transducin-like e 99.9 4.2E-22 1.4E-26 206.1 34.3 232 72-358 54-303 (337)
45 2hes_X YDR267CP; beta-propelle 99.9 3.5E-23 1.2E-27 220.0 26.8 183 71-255 60-269 (330)
46 3dw8_B Serine/threonine-protei 99.9 1.7E-22 5.8E-27 219.2 31.1 259 71-364 30-386 (447)
47 2pm9_A Protein WEB1, protein t 99.9 1E-22 3.6E-27 218.3 29.0 198 71-270 69-303 (416)
48 2xzm_R RACK1; ribosome, transl 99.9 2.2E-22 7.7E-27 214.3 31.1 227 71-321 78-327 (343)
49 4ery_A WD repeat-containing pr 99.9 1.5E-22 5E-27 211.1 29.0 206 102-358 18-230 (312)
50 3sfz_A APAF-1, apoptotic pepti 99.9 1.6E-21 5.3E-26 240.6 43.0 233 103-358 611-878 (1249)
51 3k26_A Polycomb protein EED; W 99.9 2.4E-22 8.2E-27 210.4 29.5 247 72-320 21-352 (366)
52 3fm0_A Protein CIAO1; WDR39,SG 99.9 2.1E-22 7E-27 215.4 29.5 247 71-357 63-341 (345)
53 2aq5_A Coronin-1A; WD40 repeat 99.9 2E-22 6.7E-27 218.4 28.3 183 71-255 83-287 (402)
54 4gga_A P55CDC, cell division c 99.9 1.1E-21 3.7E-26 214.8 33.8 259 69-352 105-396 (420)
55 3dm0_A Maltose-binding peripla 99.9 3E-22 1E-26 233.8 30.5 189 71-264 432-635 (694)
56 3iz6_a 40S ribosomal protein R 99.9 7.1E-23 2.4E-27 221.8 23.1 228 72-307 111-371 (380)
57 4aez_A CDC20, WD repeat-contai 99.9 5E-22 1.7E-26 215.8 29.8 254 81-358 103-387 (401)
58 4a11_B DNA excision repair pro 99.9 2.8E-21 9.5E-26 205.4 34.7 265 71-356 45-370 (408)
59 3i2n_A WD repeat-containing pr 99.9 2.3E-22 7.8E-27 210.3 25.5 237 71-320 67-338 (357)
60 3v7d_B Cell division control p 99.9 1.2E-21 4.2E-26 215.1 31.3 247 80-357 131-427 (464)
61 3vl1_A 26S proteasome regulato 99.9 3.9E-22 1.3E-26 215.0 25.8 232 75-353 62-324 (420)
62 1r5m_A SIR4-interacting protei 99.9 6E-22 2E-26 211.3 26.5 256 72-353 48-363 (425)
63 2pm7_B Protein transport prote 99.9 6.4E-22 2.2E-26 206.8 26.1 184 72-255 56-274 (297)
64 3dw8_B Serine/threonine-protei 99.9 5.3E-22 1.8E-26 215.3 26.1 241 72-320 96-433 (447)
65 3dwl_C Actin-related protein 2 99.9 9E-23 3.1E-27 217.2 19.1 183 71-254 57-270 (377)
66 4ggc_A P55CDC, cell division c 99.9 1.4E-20 4.6E-25 194.0 34.3 254 74-352 30-316 (318)
67 1sq9_A Antiviral protein SKI8; 99.9 5.8E-22 2E-26 211.6 24.3 191 72-269 19-275 (397)
68 1k8k_C P40, ARP2/3 complex 41 99.9 1.9E-21 6.4E-26 205.0 27.7 186 72-261 11-233 (372)
69 2pm9_A Protein WEB1, protein t 99.9 7.6E-22 2.6E-26 211.6 25.0 231 88-359 42-302 (416)
70 2j04_B YDR362CP, TAU91; beta p 99.9 3E-22 1E-26 229.4 23.3 184 72-260 210-427 (524)
71 4gq1_A NUP37; propeller, trans 99.9 9.9E-23 3.4E-27 222.3 17.8 235 76-321 96-377 (393)
72 3mmy_A MRNA export factor; mRN 99.9 2.2E-21 7.4E-26 202.9 27.1 220 71-323 41-335 (368)
73 3k26_A Polycomb protein EED; W 99.9 5.7E-22 1.9E-26 207.6 22.3 200 72-274 72-332 (366)
74 4aow_A Guanine nucleotide-bind 99.9 3.7E-21 1.3E-25 200.2 28.1 189 72-261 131-337 (340)
75 1r5m_A SIR4-interacting protei 99.9 2.5E-21 8.7E-26 206.4 27.1 193 71-269 110-327 (425)
76 1yfq_A Cell cycle arrest prote 99.9 1.8E-21 6.2E-26 203.1 25.1 244 71-359 13-290 (342)
77 3mkq_A Coatomer beta'-subunit; 99.9 3.3E-21 1.1E-25 226.0 30.2 237 71-359 15-267 (814)
78 3zwl_B Eukaryotic translation 99.9 9.4E-21 3.2E-25 198.1 29.8 250 102-359 27-312 (369)
79 3gre_A Serine/threonine-protei 99.9 8.6E-22 2.9E-26 214.6 22.8 260 70-359 64-367 (437)
80 3jrp_A Fusion protein of prote 99.9 2.9E-21 9.8E-26 203.2 25.6 191 72-262 58-288 (379)
81 4e54_B DNA damage-binding prot 99.9 1.9E-21 6.5E-26 214.1 24.7 206 104-358 116-334 (435)
82 2xyi_A Probable histone-bindin 99.9 7.1E-21 2.4E-25 209.5 28.0 188 72-261 131-353 (430)
83 4h5i_A Guanine nucleotide-exch 99.9 1.8E-21 6.2E-26 210.7 22.6 185 72-260 136-342 (365)
84 4aez_A CDC20, WD repeat-contai 99.9 5E-21 1.7E-25 207.9 26.1 184 80-264 185-383 (401)
85 3bg1_A Protein SEC13 homolog; 99.9 1.4E-21 4.6E-26 206.5 20.7 184 72-255 60-282 (316)
86 1k8k_C P40, ARP2/3 complex 41 99.9 9.9E-21 3.4E-25 199.4 27.3 187 71-261 54-274 (372)
87 1sq9_A Antiviral protein SKI8; 99.9 5.4E-21 1.8E-25 204.1 25.5 173 70-247 122-366 (397)
88 3jro_A Fusion protein of prote 99.9 1.2E-20 4.1E-25 223.8 29.8 183 72-255 12-227 (753)
89 2ovr_B FBW7, F-BOX/WD repeat p 99.9 5.9E-20 2E-24 201.6 32.7 250 79-359 127-399 (445)
90 2j04_B YDR362CP, TAU91; beta p 99.9 2.2E-21 7.4E-26 222.4 21.8 209 81-320 173-414 (524)
91 3i2n_A WD repeat-containing pr 99.9 4.3E-21 1.5E-25 200.6 21.8 180 71-255 20-232 (357)
92 3odt_A Protein DOA1; ubiquitin 99.9 9.1E-20 3.1E-24 187.0 31.1 181 70-261 60-255 (313)
93 1p22_A F-BOX/WD-repeat protein 99.9 3.5E-20 1.2E-24 203.5 29.0 179 78-268 140-332 (435)
94 3ei3_B DNA damage-binding prot 99.9 1.9E-20 6.5E-25 200.4 26.1 191 71-268 120-346 (383)
95 3f3f_A Nucleoporin SEH1; struc 99.9 1.6E-20 5.6E-25 193.0 24.1 201 71-271 59-347 (351)
96 4h5i_A Guanine nucleotide-exch 99.9 1.2E-20 4.2E-25 204.2 23.8 207 80-320 93-329 (365)
97 4a11_B DNA excision repair pro 99.9 8.6E-21 3E-25 201.6 21.3 230 91-355 23-280 (408)
98 3mkq_A Coatomer beta'-subunit; 99.9 6.4E-20 2.2E-24 215.1 30.5 183 70-255 56-248 (814)
99 3lrv_A PRE-mRNA-splicing facto 99.9 1E-20 3.4E-25 201.2 20.9 180 80-264 47-247 (343)
100 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.1E-19 3.9E-24 200.5 29.4 161 105-269 100-279 (450)
101 3odt_A Protein DOA1; ubiquitin 99.9 3.4E-19 1.2E-23 182.7 29.9 227 72-359 21-263 (313)
102 3lrv_A PRE-mRNA-splicing facto 99.9 2.2E-20 7.4E-25 198.6 21.3 170 84-254 88-279 (343)
103 3gre_A Serine/threonine-protei 99.8 3.2E-20 1.1E-24 202.2 22.1 200 69-270 111-368 (437)
104 2j04_A TAU60, YPL007P, hypothe 99.8 1.7E-20 6E-25 215.7 20.7 232 70-320 86-347 (588)
105 4ggc_A P55CDC, cell division c 99.8 2.3E-19 7.8E-24 184.8 26.0 204 54-260 45-314 (318)
106 1yfq_A Cell cycle arrest prote 99.8 1.2E-19 4.2E-24 189.2 24.0 180 71-255 58-271 (342)
107 1l0q_A Surface layer protein; 99.8 3.7E-19 1.3E-23 190.2 28.2 250 82-358 3-282 (391)
108 2xyi_A Probable histone-bindin 99.8 1.1E-19 3.7E-24 200.1 23.7 184 72-255 184-398 (430)
109 3mmy_A MRNA export factor; mRN 99.8 1.4E-19 4.9E-24 189.0 23.3 182 70-255 87-335 (368)
110 4gga_A P55CDC, cell division c 99.8 3.9E-19 1.3E-23 194.5 27.7 188 72-262 150-396 (420)
111 2vdu_B TRNA (guanine-N(7)-)-me 99.8 1.1E-19 3.8E-24 200.6 23.1 179 71-254 104-326 (450)
112 2ovr_B FBW7, F-BOX/WD repeat p 99.8 1.7E-18 5.9E-23 189.9 30.4 237 72-322 162-426 (445)
113 3v7d_B Cell division control p 99.8 4.5E-19 1.6E-23 194.6 24.9 172 77-255 276-451 (464)
114 2oaj_A Protein SNI1; WD40 repe 99.8 2E-19 6.8E-24 218.3 24.2 187 71-264 19-245 (902)
115 3bws_A Protein LP49; two-domai 99.8 7.4E-19 2.5E-23 190.5 26.0 247 74-359 127-398 (433)
116 3jro_A Fusion protein of prote 99.8 3.3E-19 1.1E-23 211.5 22.8 191 71-261 55-285 (753)
117 2oaj_A Protein SNI1; WD40 repe 99.8 1.8E-19 6.1E-24 218.7 20.3 163 77-244 443-690 (902)
118 3vu4_A KMHSV2; beta-propeller 99.8 2.7E-18 9.1E-23 184.7 26.9 185 72-262 22-272 (355)
119 4gq1_A NUP37; propeller, trans 99.8 2.7E-19 9.3E-24 195.1 18.5 173 80-255 155-379 (393)
120 2j04_A TAU60, YPL007P, hypothe 99.8 6.4E-19 2.2E-23 202.8 21.3 181 73-261 19-254 (588)
121 2w18_A PALB2, fancn, partner a 99.8 6.1E-19 2.1E-23 192.1 19.9 161 89-255 155-346 (356)
122 2hqs_A Protein TOLB; TOLB, PAL 99.8 6E-18 2.1E-22 186.7 28.2 228 81-353 143-389 (415)
123 1p22_A F-BOX/WD-repeat protein 99.8 6E-18 2E-22 185.6 25.7 169 80-260 182-364 (435)
124 3bws_A Protein LP49; two-domai 99.8 2.7E-17 9.1E-22 178.2 27.8 231 72-320 172-417 (433)
125 3vu4_A KMHSV2; beta-propeller 99.8 5E-18 1.7E-22 182.6 20.0 175 79-255 68-325 (355)
126 1l0q_A Surface layer protein; 99.8 1.1E-16 3.6E-21 171.1 26.2 190 71-266 75-280 (391)
127 2w18_A PALB2, fancn, partner a 99.7 3.8E-17 1.3E-21 178.0 19.9 140 78-220 190-356 (356)
128 2hqs_A Protein TOLB; TOLB, PAL 99.7 4.3E-16 1.5E-20 171.8 27.0 177 72-255 181-373 (415)
129 2oit_A Nucleoporin 214KDA; NH2 99.7 3E-17 1E-21 182.9 17.6 178 72-254 39-259 (434)
130 3u4y_A Uncharacterized protein 99.7 2.3E-15 7.8E-20 157.0 27.9 175 79-255 8-195 (331)
131 1nir_A Nitrite reductase; hemo 99.7 2.9E-15 9.8E-20 172.0 31.1 271 72-359 181-522 (543)
132 2ojh_A Uncharacterized protein 99.7 3E-15 1E-19 150.7 27.0 235 72-326 44-294 (297)
133 2ojh_A Uncharacterized protein 99.7 1.5E-15 5E-20 153.0 24.5 231 87-358 18-265 (297)
134 3vgz_A Uncharacterized protein 99.7 9.2E-15 3.1E-19 152.9 28.1 240 72-358 43-310 (353)
135 1nir_A Nitrite reductase; hemo 99.7 8E-15 2.7E-19 168.3 29.1 264 77-355 145-462 (543)
136 1ri6_A Putative isomerase YBHE 99.7 7.9E-15 2.7E-19 152.2 25.0 174 85-260 9-208 (343)
137 1xfd_A DIP, dipeptidyl aminope 99.7 4E-16 1.4E-20 181.2 16.7 172 76-254 23-273 (723)
138 3hfq_A Uncharacterized protein 99.7 1.4E-14 4.7E-19 153.0 26.4 181 72-255 42-259 (347)
139 2ecf_A Dipeptidyl peptidase IV 99.7 2.6E-15 8.9E-20 175.1 22.0 177 72-255 39-305 (741)
140 1pby_B Quinohemoprotein amine 99.7 1.5E-14 5E-19 149.7 25.2 142 82-225 2-167 (337)
141 2oit_A Nucleoporin 214KDA; NH2 99.6 2.4E-15 8.3E-20 167.6 19.3 151 71-223 94-280 (434)
142 3u4y_A Uncharacterized protein 99.6 3.9E-14 1.3E-18 147.7 25.9 178 74-254 44-239 (331)
143 3vgz_A Uncharacterized protein 99.6 1.1E-13 3.7E-18 144.8 28.5 176 73-254 92-290 (353)
144 2ecf_A Dipeptidyl peptidase IV 99.6 2.5E-14 8.6E-19 166.8 25.5 233 107-359 36-329 (741)
145 1xfd_A DIP, dipeptidyl aminope 99.6 3E-14 1E-18 165.4 25.8 177 72-253 63-323 (723)
146 1jmx_B Amine dehydrogenase; ox 99.6 6.7E-14 2.3E-18 145.8 22.2 146 77-225 7-179 (349)
147 2z3z_A Dipeptidyl aminopeptida 99.6 9.5E-14 3.3E-18 161.2 25.6 244 75-360 126-443 (706)
148 1z68_A Fibroblast activation p 99.6 1.3E-14 4.4E-19 169.1 16.5 171 76-252 22-269 (719)
149 1ri6_A Putative isomerase YBHE 99.6 4.5E-13 1.5E-17 138.9 25.7 180 72-254 40-249 (343)
150 2z3z_A Dipeptidyl aminopeptida 99.6 6.8E-14 2.3E-18 162.5 21.5 176 72-253 84-329 (706)
151 1pby_B Quinohemoprotein amine 99.6 4.9E-13 1.7E-17 138.3 23.8 173 73-254 37-298 (337)
152 1k32_A Tricorn protease; prote 99.5 1.8E-13 6E-18 167.7 22.6 224 75-323 250-491 (1045)
153 4a5s_A Dipeptidyl peptidase 4 99.5 4.1E-13 1.4E-17 158.4 24.3 173 75-253 22-277 (740)
154 3pe7_A Oligogalacturonate lyas 99.5 2.3E-12 8E-17 137.2 27.5 174 76-254 42-256 (388)
155 1k32_A Tricorn protease; prote 99.5 1.3E-12 4.5E-17 160.0 29.0 176 72-255 298-491 (1045)
156 3hfq_A Uncharacterized protein 99.5 1.1E-12 3.6E-17 138.5 23.1 148 105-255 37-206 (347)
157 3scy_A Hypothetical bacterial 99.5 4.6E-12 1.6E-16 134.6 27.9 180 72-255 52-278 (361)
158 1z68_A Fibroblast activation p 99.5 1.9E-13 6.6E-18 159.2 17.5 180 72-253 62-329 (719)
159 3o4h_A Acylamino-acid-releasin 99.5 5.2E-13 1.8E-17 152.1 19.1 172 72-252 24-211 (582)
160 1jmx_B Amine dehydrogenase; ox 99.5 1.1E-12 3.9E-17 136.5 19.4 182 72-263 45-327 (349)
161 4a5s_A Dipeptidyl peptidase 4 99.5 1.7E-12 5.6E-17 153.3 22.4 144 109-255 18-190 (740)
162 3scy_A Hypothetical bacterial 99.4 1.6E-11 5.5E-16 130.4 26.2 179 72-255 102-325 (361)
163 1jof_A Carboxy-CIS,CIS-muconat 99.4 7.1E-12 2.4E-16 134.7 22.1 182 72-255 42-274 (365)
164 3pe7_A Oligogalacturonate lyas 99.4 1.1E-11 3.9E-16 131.9 22.2 219 102-357 25-279 (388)
165 3o4h_A Acylamino-acid-releasin 99.4 5.1E-12 1.8E-16 143.9 15.3 168 75-255 115-301 (582)
166 1jof_A Carboxy-CIS,CIS-muconat 99.3 9.9E-11 3.4E-15 125.7 23.3 147 106-255 38-212 (365)
167 3fvz_A Peptidyl-glycine alpha- 99.3 5.3E-10 1.8E-14 118.6 28.1 174 72-248 26-252 (329)
168 3c5m_A Oligogalacturonate lyas 99.3 3.2E-11 1.1E-15 128.1 17.9 174 76-254 42-256 (396)
169 3azo_A Aminopeptidase; POP fam 99.3 1E-10 3.4E-15 134.8 20.1 180 73-255 27-260 (662)
170 3e5z_A Putative gluconolactona 99.2 2.5E-09 8.6E-14 110.6 24.3 179 72-253 30-235 (296)
171 1q7f_A NHL, brain tumor CG1071 99.2 1.2E-08 4E-13 104.6 28.3 175 72-253 32-224 (286)
172 3azo_A Aminopeptidase; POP fam 99.2 6.3E-10 2.2E-14 128.1 20.8 177 72-254 132-353 (662)
173 2dg1_A DRP35, lactonase; beta 99.2 1.1E-08 3.6E-13 107.1 28.4 181 72-253 47-250 (333)
174 2xdw_A Prolyl endopeptidase; a 99.2 3.1E-09 1.1E-13 124.6 25.5 179 72-254 127-353 (710)
175 3dsm_A Uncharacterized protein 99.1 9.6E-09 3.3E-13 109.3 26.3 172 79-254 52-243 (328)
176 1q7f_A NHL, brain tumor CG1071 99.1 1E-08 3.6E-13 105.0 25.6 174 72-252 79-267 (286)
177 3c5m_A Oligogalacturonate lyas 99.1 3.2E-10 1.1E-14 120.3 14.5 142 108-254 36-207 (396)
178 1xip_A Nucleoporin NUP159; bet 99.1 1.3E-09 4.6E-14 120.5 19.3 171 72-255 40-233 (388)
179 2oiz_A Aromatic amine dehydrog 99.1 1.7E-09 5.7E-14 117.2 19.2 170 74-248 54-360 (361)
180 2bkl_A Prolyl endopeptidase; m 99.1 6.8E-09 2.3E-13 121.5 25.8 177 72-254 123-336 (695)
181 2gop_A Trilobed protease; beta 99.1 6E-09 2E-13 109.3 22.4 153 90-255 42-234 (347)
182 3fvz_A Peptidyl-glycine alpha- 99.1 4.4E-09 1.5E-13 111.5 21.5 177 72-254 93-309 (329)
183 3no2_A Uncharacterized protein 99.1 1.5E-08 5E-13 106.1 24.2 166 79-254 3-183 (276)
184 1qks_A Cytochrome CD1 nitrite 99.1 2.2E-08 7.4E-13 115.9 27.3 171 81-254 167-407 (567)
185 2oiz_A Aromatic amine dehydrog 99.0 7.1E-09 2.4E-13 112.2 18.8 96 89-187 29-146 (361)
186 2dg1_A DRP35, lactonase; beta 99.0 2.3E-09 7.8E-14 112.2 14.3 147 103-254 40-200 (333)
187 3e5z_A Putative gluconolactona 99.0 8.4E-09 2.9E-13 106.7 17.8 180 72-260 71-283 (296)
188 2gop_A Trilobed protease; beta 99.0 1.3E-08 4.3E-13 106.8 17.3 168 72-254 61-280 (347)
189 1rwi_B Serine/threonine-protei 99.0 5.1E-08 1.7E-12 98.4 21.1 176 72-252 69-250 (270)
190 3dsm_A Uncharacterized protein 98.9 8.1E-08 2.8E-12 102.1 21.3 176 72-254 86-285 (328)
191 2xdw_A Prolyl endopeptidase; a 98.9 1.4E-07 5E-12 110.4 24.8 176 75-255 176-399 (710)
192 1rwi_B Serine/threonine-protei 98.8 1.2E-07 4.2E-12 95.5 19.4 175 72-252 26-208 (270)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 1.3E-06 4.4E-11 89.9 25.3 177 73-253 21-243 (314)
194 1yr2_A Prolyl oligopeptidase; 98.8 3.6E-07 1.2E-11 107.8 23.7 177 72-255 165-381 (741)
195 3no2_A Uncharacterized protein 98.8 2.7E-07 9.4E-12 96.4 20.2 171 74-253 41-230 (276)
196 3g4e_A Regucalcin; six bladed 98.8 1.3E-06 4.4E-11 91.1 24.9 170 80-253 24-216 (297)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 7.5E-07 2.6E-11 91.6 21.1 176 72-254 73-286 (314)
198 2z2n_A Virginiamycin B lyase; 98.7 3.4E-06 1.2E-10 85.5 25.6 174 72-253 17-200 (299)
199 3iuj_A Prolyl endopeptidase; h 98.7 7E-07 2.4E-11 104.8 22.8 193 57-255 116-345 (693)
200 2z2n_A Virginiamycin B lyase; 98.7 3.4E-06 1.2E-10 85.5 24.8 175 72-252 59-241 (299)
201 1qks_A Cytochrome CD1 nitrite 98.7 2.5E-06 8.6E-11 98.6 25.5 135 117-253 165-315 (567)
202 2ghs_A AGR_C_1268P; regucalcin 98.7 5.4E-06 1.8E-10 87.9 26.1 168 80-253 60-247 (326)
203 3g4e_A Regucalcin; six bladed 98.7 1.9E-06 6.3E-11 89.9 22.0 179 72-257 56-263 (297)
204 3dr2_A Exported gluconolactona 98.7 1.5E-06 5E-11 90.9 21.0 173 75-251 50-254 (305)
205 2bkl_A Prolyl endopeptidase; m 98.6 7.4E-07 2.5E-11 104.3 19.5 175 74-255 172-382 (695)
206 2mad_H Methylamine dehydrogena 98.6 5.2E-06 1.8E-10 90.7 23.5 170 74-253 70-336 (373)
207 2qc5_A Streptogramin B lactona 98.6 1.8E-05 6.3E-10 80.1 25.2 175 72-253 22-205 (300)
208 1xip_A Nucleoporin NUP159; bet 98.5 6.1E-07 2.1E-11 99.2 14.9 125 72-208 90-230 (388)
209 2mad_H Methylamine dehydrogena 98.5 2.9E-05 9.8E-10 84.7 28.1 125 92-224 48-198 (373)
210 2qc5_A Streptogramin B lactona 98.5 2.2E-05 7.5E-10 79.5 25.2 175 72-253 64-247 (300)
211 2ghs_A AGR_C_1268P; regucalcin 98.5 1.1E-05 3.6E-10 85.6 23.0 174 72-255 92-291 (326)
212 3sjl_D Methylamine dehydrogena 98.5 4.6E-06 1.6E-10 92.1 19.7 247 75-359 83-371 (386)
213 3hrp_A Uncharacterized protein 98.5 7.2E-06 2.5E-10 90.5 20.9 174 72-252 133-339 (409)
214 3hrp_A Uncharacterized protein 98.5 1E-05 3.5E-10 89.3 22.0 172 75-251 176-395 (409)
215 1yr2_A Prolyl oligopeptidase; 98.4 9.3E-06 3.2E-10 95.8 22.0 172 75-254 214-425 (741)
216 2qe8_A Uncharacterized protein 98.4 9.2E-06 3.1E-10 86.6 19.9 148 105-252 64-264 (343)
217 2ece_A 462AA long hypothetical 98.4 2.2E-05 7.4E-10 88.2 22.1 173 80-255 95-340 (462)
218 3dr2_A Exported gluconolactona 98.3 9.5E-06 3.3E-10 84.6 16.5 174 72-255 88-296 (305)
219 2qe8_A Uncharacterized protein 98.3 1.7E-05 5.9E-10 84.5 18.7 181 72-255 69-310 (343)
220 3iuj_A Prolyl endopeptidase; h 98.3 2.2E-05 7.4E-10 92.2 21.1 174 75-255 180-390 (693)
221 3nok_A Glutaminyl cyclase; bet 98.2 2.7E-05 9.4E-10 81.7 17.7 172 80-258 64-257 (268)
222 3c75_H MADH, methylamine dehyd 98.2 6.7E-05 2.3E-09 83.9 22.0 97 91-190 99-218 (426)
223 3sjl_D Methylamine dehydrogena 98.2 7.6E-05 2.6E-09 82.4 22.1 138 79-221 42-208 (386)
224 3nol_A Glutamine cyclotransfer 98.2 2.4E-05 8.2E-10 82.0 17.1 175 80-259 52-248 (262)
225 2hz6_A Endoplasmic reticulum t 98.2 1.5E-07 5.1E-12 102.3 -0.5 140 80-226 8-154 (369)
226 2ece_A 462AA long hypothetical 98.2 3.6E-05 1.2E-09 86.5 17.3 182 77-260 145-408 (462)
227 2iwa_A Glutamine cyclotransfer 98.1 9.9E-05 3.4E-09 77.5 19.5 174 77-258 28-228 (266)
228 3mbr_X Glutamine cyclotransfer 98.1 0.00016 5.5E-09 75.0 20.0 173 81-258 31-226 (243)
229 1kb0_A Quinohemoprotein alcoho 98.1 7E-05 2.4E-09 88.1 18.5 160 92-254 284-538 (677)
230 1yiq_A Quinohemoprotein alcoho 98.0 0.00016 5.4E-09 85.3 20.0 178 75-255 240-537 (689)
231 1fwx_A Nitrous oxide reductase 98.0 0.00024 8.3E-09 82.2 20.3 179 80-261 100-361 (595)
232 1mda_H Methylamine dehydrogena 97.9 8.7E-05 3E-09 81.3 15.1 86 92-180 47-157 (368)
233 2fp8_A Strictosidine synthase; 97.9 0.00077 2.6E-08 70.6 20.9 176 75-254 24-247 (322)
234 1npe_A Nidogen, entactin; glyc 97.9 0.0011 3.7E-08 67.4 20.6 161 91-254 10-185 (267)
235 2hz6_A Endoplasmic reticulum t 97.7 1.4E-05 4.8E-10 86.7 4.2 127 118-255 8-138 (369)
236 3c75_H MADH, methylamine dehyd 97.7 0.00019 6.3E-09 80.3 13.3 132 117-254 82-246 (426)
237 3hxj_A Pyrrolo-quinoline quino 97.6 0.00057 2E-08 70.4 14.4 159 81-251 107-270 (330)
238 2p4o_A Hypothetical protein; p 97.6 0.017 5.7E-07 60.2 25.4 173 75-251 37-227 (306)
239 1kb0_A Quinohemoprotein alcoho 97.6 0.00089 3E-08 78.7 16.9 78 111-189 246-354 (677)
240 1npe_A Nidogen, entactin; glyc 97.6 0.0096 3.3E-07 60.3 22.3 171 72-248 81-263 (267)
241 3nok_A Glutaminyl cyclase; bet 97.5 0.0028 9.7E-08 66.4 18.2 134 109-252 56-195 (268)
242 3nol_A Glutamine cyclotransfer 97.5 0.0027 9.4E-08 66.4 17.9 136 110-252 45-186 (262)
243 3p5b_L Low density lipoprotein 97.5 0.051 1.8E-06 59.5 28.4 165 87-254 88-264 (400)
244 2xe4_A Oligopeptidase B; hydro 97.5 0.00097 3.3E-08 79.2 14.9 144 105-254 170-337 (751)
245 2xe4_A Oligopeptidase B; hydro 97.4 0.0021 7.3E-08 76.3 17.7 180 72-255 176-386 (751)
246 3hxj_A Pyrrolo-quinoline quino 97.4 0.0014 4.7E-08 67.6 14.0 161 79-251 145-310 (330)
247 1fwx_A Nitrous oxide reductase 97.4 0.00032 1.1E-08 81.2 10.0 163 90-255 174-407 (595)
248 1kv9_A Type II quinohemoprotei 97.4 0.0032 1.1E-07 73.9 18.3 176 76-255 236-520 (668)
249 2iwa_A Glutamine cyclotransfer 97.4 0.0032 1.1E-07 66.0 16.1 138 109-253 22-167 (266)
250 4a2l_A BT_4663, two-component 97.4 0.021 7.1E-07 67.6 24.9 173 77-254 363-561 (795)
251 3v65_B Low-density lipoprotein 97.4 0.014 4.7E-07 63.6 21.6 165 87-254 92-264 (386)
252 1ijq_A LDL receptor, low-densi 97.3 0.035 1.2E-06 58.4 24.0 163 89-254 8-182 (316)
253 1yiq_A Quinohemoprotein alcoho 97.3 0.0047 1.6E-07 72.7 18.7 75 112-187 239-344 (689)
254 3v64_C Agrin; beta propeller, 97.3 0.026 8.8E-07 60.6 22.2 163 89-254 51-221 (349)
255 3mbr_X Glutamine cyclotransfer 97.2 0.05 1.7E-06 56.2 22.8 135 108-248 21-161 (243)
256 2fp8_A Strictosidine synthase; 97.2 0.009 3.1E-07 62.4 16.6 140 109-254 20-203 (322)
257 4a2l_A BT_4663, two-component 97.1 0.069 2.3E-06 63.2 26.0 178 73-253 312-515 (795)
258 1flg_A Protein (quinoprotein e 97.1 0.016 5.4E-07 67.0 20.0 160 91-255 291-548 (582)
259 3v64_C Agrin; beta propeller, 97.1 0.085 2.9E-06 56.5 24.4 177 72-253 75-261 (349)
260 2ad6_A Methanol dehydrogenase 97.1 0.015 5.2E-07 66.9 19.5 136 117-255 311-526 (571)
261 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.0058 2E-07 64.9 14.1 140 81-226 53-212 (376)
262 3m0c_C LDL receptor, low-densi 97.0 0.19 6.4E-06 60.3 28.3 164 87-253 400-575 (791)
263 3tc9_A Hypothetical hydrolase; 97.0 0.027 9.2E-07 62.4 19.2 148 72-221 139-301 (430)
264 3v65_B Low-density lipoprotein 97.0 0.069 2.3E-06 58.1 22.0 177 72-253 118-304 (386)
265 3q7m_A Lipoprotein YFGL, BAMB; 96.9 0.0047 1.6E-07 65.7 11.8 132 81-218 239-375 (376)
266 1w6s_A Methanol dehydrogenase 96.9 0.038 1.3E-06 64.2 20.2 160 92-255 279-535 (599)
267 3v9f_A Two-component system se 96.9 0.048 1.6E-06 64.4 21.1 170 77-253 369-556 (781)
268 1mda_H Methylamine dehydrogena 96.9 0.002 6.7E-08 70.5 8.5 89 130-221 47-158 (368)
269 3tc9_A Hypothetical hydrolase; 96.8 0.019 6.7E-07 63.5 15.8 142 108-254 137-288 (430)
270 2p4o_A Hypothetical protein; p 96.8 0.068 2.3E-06 55.5 19.1 180 72-255 74-277 (306)
271 4hw6_A Hypothetical protein, I 96.7 0.076 2.6E-06 58.9 20.4 149 72-221 141-304 (433)
272 1ijq_A LDL receptor, low-densi 96.7 0.41 1.4E-05 50.2 24.6 178 72-254 32-225 (316)
273 3amr_A 3-phytase; beta-propell 96.7 0.1 3.4E-06 56.9 19.9 173 82-255 41-251 (355)
274 3qqz_A Putative uncharacterize 96.6 0.15 5E-06 53.0 20.2 152 102-255 21-192 (255)
275 3sov_A LRP-6, low-density lipo 96.6 0.071 2.4E-06 56.6 18.1 163 89-254 11-184 (318)
276 3v9f_A Two-component system se 96.6 0.15 5.2E-06 60.1 22.6 173 75-254 317-513 (781)
277 1k3i_A Galactose oxidase precu 96.5 0.5 1.7E-05 54.7 26.2 106 80-186 197-328 (656)
278 2xbg_A YCF48-like protein; pho 96.5 0.16 5.5E-06 53.6 20.2 141 105-254 160-310 (327)
279 3p5b_L Low density lipoprotein 96.5 0.43 1.5E-05 52.1 23.9 178 72-254 114-307 (400)
280 1k3i_A Galactose oxidase precu 96.3 0.078 2.7E-06 61.6 17.6 178 77-255 250-530 (656)
281 3sov_A LRP-6, low-density lipo 96.3 0.95 3.3E-05 47.8 24.4 177 72-253 37-224 (318)
282 3qqz_A Putative uncharacterize 96.2 1 3.4E-05 46.6 23.6 175 76-255 33-242 (255)
283 4a0p_A LRP6, LRP-6, low-densit 96.2 0.6 2.1E-05 54.3 24.3 162 89-254 13-184 (628)
284 3m0c_C LDL receptor, low-densi 96.2 0.51 1.7E-05 56.6 24.0 178 72-254 426-619 (791)
285 2p9w_A MAL S 1 allergenic prot 96.1 0.09 3.1E-06 56.7 15.4 142 110-254 15-203 (334)
286 1n7d_A LDL receptor, low-densi 96.1 0.03 1E-06 66.1 12.7 163 89-254 384-558 (699)
287 2p9w_A MAL S 1 allergenic prot 96.1 0.54 1.8E-05 50.7 21.2 178 75-255 18-253 (334)
288 3kya_A Putative phosphatase; s 95.9 0.17 5.9E-06 57.5 17.4 149 72-221 141-341 (496)
289 3sre_A PON1, serum paraoxonase 95.8 0.66 2.3E-05 50.4 21.0 161 89-253 81-284 (355)
290 1kv9_A Type II quinohemoprotei 95.8 0.063 2.1E-06 62.9 13.8 145 81-226 117-338 (668)
291 1flg_A Protein (quinoprotein e 95.7 0.046 1.6E-06 63.1 12.0 82 128-211 465-549 (582)
292 4hw6_A Hypothetical protein, I 95.7 0.11 3.8E-06 57.5 14.6 144 108-254 139-291 (433)
293 2ad6_A Methanol dehydrogenase 95.6 0.03 1E-06 64.4 10.0 81 128-210 443-525 (571)
294 3s94_A LRP-6, low-density lipo 95.6 0.93 3.2E-05 52.6 22.3 164 88-254 15-189 (619)
295 3kya_A Putative phosphatase; s 95.4 0.22 7.4E-06 56.6 15.9 145 109-254 140-328 (496)
296 2xbg_A YCF48-like protein; pho 95.4 1.9 6.7E-05 45.2 22.4 143 106-252 120-266 (327)
297 3amr_A 3-phytase; beta-propell 95.1 0.57 1.9E-05 51.0 17.2 129 90-220 98-262 (355)
298 4a0p_A LRP6, LRP-6, low-densit 95.0 3.2 0.00011 48.2 24.5 177 72-254 39-224 (628)
299 2ism_A Putative oxidoreductase 95.0 0.56 1.9E-05 50.2 16.8 99 109-210 32-153 (352)
300 3pbp_A Nucleoporin NUP82; beta 94.9 1.3 4.4E-05 49.5 19.6 143 72-217 23-208 (452)
301 1w6s_A Methanol dehydrogenase 94.8 3.5 0.00012 47.7 24.0 143 81-226 62-292 (599)
302 3das_A Putative oxidoreductase 94.7 0.91 3.1E-05 49.1 17.4 141 108-249 32-215 (347)
303 3s94_A LRP-6, low-density lipo 94.6 5.2 0.00018 46.3 24.8 162 89-253 324-496 (619)
304 3a9g_A Putative uncharacterize 94.6 0.61 2.1E-05 50.1 15.9 100 109-210 30-153 (354)
305 2g8s_A Glucose/sorbosone dehyd 94.3 0.61 2.1E-05 49.9 15.0 142 109-253 19-214 (353)
306 1cru_A Protein (soluble quinop 94.2 1.5 5.1E-05 48.9 18.5 102 109-210 28-162 (454)
307 3ott_A Two-component system se 92.6 14 0.00047 43.1 24.0 166 77-253 69-249 (758)
308 1n7d_A LDL receptor, low-densi 92.3 0.14 4.7E-06 60.5 6.3 143 81-226 465-619 (699)
309 3s25_A Hypothetical 7-bladed b 92.1 4.1 0.00014 42.8 17.0 126 112-254 57-202 (302)
310 1tl2_A L10, protein (tachylect 91.9 0.39 1.3E-05 49.2 8.3 138 109-253 42-199 (236)
311 3ii7_A Kelch-like protein 7; p 91.3 9.2 0.00032 38.8 18.2 138 80-223 55-227 (306)
312 3sre_A PON1, serum paraoxonase 91.0 5.3 0.00018 43.2 16.6 140 110-255 52-240 (355)
313 3pbp_A Nucleoporin NUP82; beta 89.8 8.1 0.00028 43.1 16.8 131 117-252 30-196 (452)
314 3a9g_A Putative uncharacterize 89.5 10 0.00036 40.3 17.3 136 72-210 31-216 (354)
315 2ism_A Putative oxidoreductase 88.9 4.4 0.00015 43.1 13.9 102 149-254 30-153 (352)
316 3ott_A Two-component system se 88.7 35 0.0012 39.6 22.5 166 81-253 112-296 (758)
317 2xzh_A Clathrin heavy chain 1; 88.5 15 0.00052 39.7 17.4 119 129-255 49-171 (365)
318 3das_A Putative oxidoreductase 87.5 5.9 0.0002 42.7 13.8 113 142-255 24-159 (347)
319 2vpj_A Kelch-like protein 12; 87.5 19 0.00066 36.2 17.2 127 91-223 78-233 (301)
320 1tl2_A L10, protein (tachylect 86.9 4.3 0.00015 41.6 11.3 129 119-253 4-152 (236)
321 1cru_A Protein (soluble quinop 85.8 8.8 0.0003 42.6 14.4 106 149-255 26-163 (454)
322 2g8s_A Glucose/sorbosone dehyd 85.5 17 0.00057 38.6 16.0 137 72-210 20-216 (353)
323 3ii7_A Kelch-like protein 7; p 85.2 28 0.00096 35.1 16.9 128 90-223 23-180 (306)
324 2xn4_A Kelch-like protein 2; s 84.5 18 0.00061 36.6 15.0 126 92-223 125-278 (302)
325 2vpj_A Kelch-like protein 12; 84.4 19 0.00066 36.2 15.2 126 91-223 128-280 (301)
326 1bpo_A Protein (clathrin); cla 83.5 22 0.00076 39.9 15.9 120 128-255 47-170 (494)
327 2xn4_A Kelch-like protein 2; s 82.5 31 0.0011 34.7 15.9 127 91-223 77-231 (302)
328 1zgk_A Kelch-like ECH-associat 82.4 20 0.00068 36.5 14.5 127 91-223 137-289 (308)
329 1zgk_A Kelch-like ECH-associat 81.1 31 0.0011 35.0 15.4 127 91-223 90-242 (308)
330 3s25_A Hypothetical 7-bladed b 80.6 32 0.0011 35.9 15.4 144 91-253 88-240 (302)
331 3ei3_A DNA damage-binding prot 80.2 1.3E+02 0.0043 37.6 22.9 103 108-213 514-627 (1158)
332 3ei3_A DNA damage-binding prot 80.1 45 0.0015 41.6 18.8 93 130-224 808-916 (1158)
333 4asc_A Kelch repeat and BTB do 78.9 48 0.0017 33.6 16.0 128 91-223 13-176 (315)
334 3sbq_A Nitrous-oxide reductase 77.9 5.9 0.0002 45.7 9.1 101 108-210 323-453 (638)
335 2xzh_A Clathrin heavy chain 1; 76.6 88 0.003 33.9 17.2 141 89-238 47-202 (365)
336 2uvk_A YJHT; unknown function, 74.1 42 0.0014 34.6 14.1 127 88-219 28-224 (357)
337 4asc_A Kelch repeat and BTB do 74.0 79 0.0027 32.0 16.3 102 118-223 98-223 (315)
338 2wg3_C Hedgehog-interacting pr 73.0 31 0.0011 38.4 13.4 104 109-212 15-159 (463)
339 4gq2_M Nucleoporin NUP120; bet 70.5 53 0.0018 39.9 15.6 72 109-180 237-316 (950)
340 1bpo_A Protein (clathrin); cla 69.7 1.5E+02 0.0051 33.3 17.9 146 89-243 46-206 (494)
341 2uvk_A YJHT; unknown function, 69.7 94 0.0032 31.9 15.6 80 129-210 168-260 (357)
342 2woz_A Kelch repeat and BTB do 68.3 1.1E+02 0.0036 31.1 16.2 125 93-223 80-233 (318)
343 2woz_A Kelch repeat and BTB do 65.5 69 0.0024 32.5 13.3 92 92-187 128-237 (318)
344 2be1_A Serine/threonine-protei 65.1 4.7 0.00016 43.3 4.4 107 120-226 11-135 (339)
345 4gq2_M Nucleoporin NUP120; bet 63.6 1.2E+02 0.004 36.9 16.7 37 151-188 237-273 (950)
346 2zwa_A Leucine carboxyl methyl 61.9 1E+02 0.0035 35.8 15.3 131 91-223 412-579 (695)
347 2zwa_A Leucine carboxyl methyl 58.5 94 0.0032 36.1 14.2 132 92-223 469-637 (695)
348 3b7f_A Glycosyl hydrolase, BNR 56.2 2E+02 0.0068 30.2 18.4 70 108-178 55-144 (394)
349 3sbq_A Nitrous-oxide reductase 52.0 68 0.0023 37.1 10.9 103 150-255 323-454 (638)
350 1xi4_A Clathrin heavy chain; a 51.8 45 0.0015 42.7 10.2 120 128-255 47-170 (1630)
351 1yph_C Chymotrypsin A, chain B 49.2 12 0.0004 33.8 3.5 17 637-653 29-46 (131)
352 2asu_B Hepatocyte growth facto 46.5 7.2 0.00025 38.7 1.8 76 637-719 26-107 (234)
353 1xi4_A Clathrin heavy chain; a 43.7 5.2E+02 0.018 33.3 17.7 136 90-226 124-294 (1630)
354 1gvz_A Kallikrein-1E2; antigen 42.2 12 0.0004 37.1 2.6 67 637-718 28-117 (237)
355 1sqj_A OXG-RCBH, oligoxylogluc 37.0 4.3E+02 0.015 31.0 15.4 143 107-254 14-188 (789)
356 1euf_A Duodenase; serine prote 36.9 21 0.00071 35.1 3.4 68 637-719 31-110 (227)
357 4fhn_B Nucleoporin NUP120; pro 36.8 1.2E+02 0.0042 37.4 11.0 37 152-189 240-276 (1139)
358 1vqy_A Hypothetical protein AG 36.7 15 0.00052 33.0 2.2 21 620-640 11-31 (116)
359 3gyl_B Prostasin; ENAC, zymoge 36.6 24 0.00084 35.1 3.9 72 637-718 28-111 (261)
360 3mhw_U Urokinase-type plasmino 35.0 24 0.00083 34.7 3.6 72 637-718 33-122 (247)
361 3rp2_A RAT MAST cell protease 34.0 26 0.00089 34.0 3.6 68 637-719 32-111 (224)
362 1cgh_A Cathepsin G; inflammati 32.8 26 0.0009 34.3 3.4 68 637-719 31-110 (224)
363 4fhn_B Nucleoporin NUP120; pro 32.4 33 0.0011 42.5 4.9 37 109-145 239-275 (1139)
364 1si5_H Scatter factor, hepatoc 31.8 17 0.00058 36.0 1.8 74 637-719 27-106 (240)
365 1a7s_A Heparin binding protein 31.4 25 0.00086 34.3 3.0 72 637-718 28-110 (225)
366 4ag1_A Chymase; hydrolase-de n 30.9 29 0.00098 33.9 3.2 67 637-718 32-110 (226)
367 2be1_A Serine/threonine-protei 30.8 52 0.0018 35.2 5.5 66 126-191 64-140 (339)
368 1hj8_A Trypsin I; hydrolase, r 30.7 34 0.0011 33.5 3.7 68 637-719 27-106 (222)
369 1elt_A Elastase; serine protei 30.5 19 0.00065 35.5 1.9 70 637-719 32-115 (236)
370 1fuj_A PR3, myeloblastin; hydr 30.4 44 0.0015 32.4 4.5 71 637-718 31-112 (221)
371 2zch_P Prostate-specific antig 30.1 27 0.00092 34.4 2.9 17 637-653 28-45 (237)
372 1iau_A Granzyme B; hydrolase-h 29.3 29 0.00099 34.0 3.0 67 637-718 31-109 (227)
373 1gvk_B Elastase 1, peptide inh 29.1 32 0.0011 34.0 3.3 69 637-718 32-114 (240)
374 1t8o_A Chymotrypsin A; chymotr 29.1 34 0.0012 34.0 3.5 69 637-719 44-124 (245)
375 1orf_A Granzyme A; hydrolase-h 29.1 24 0.00082 34.8 2.4 69 637-719 28-108 (234)
376 2xw9_A Complement factor D; im 28.8 39 0.0013 33.0 3.8 71 637-718 28-110 (228)
377 1mza_A Pro-granzyme K; apoptos 28.6 32 0.0011 33.9 3.2 73 637-719 30-114 (240)
378 1ym0_A Fibrinotic enzyme compo 28.6 20 0.00067 35.4 1.6 71 637-718 30-112 (238)
379 1ao5_A Glandular kallikrein-13 28.6 23 0.00078 35.0 2.1 16 637-652 28-44 (237)
380 3fzz_A Granzyme C; hydrolase, 28.5 46 0.0016 32.3 4.3 67 637-718 32-110 (227)
381 1pyt_D TC, PCPA-TC, chymotryps 28.3 42 0.0014 33.4 4.1 70 637-718 45-126 (251)
382 2bz6_H Blood coagulation facto 27.3 29 0.001 34.6 2.7 72 637-718 28-111 (254)
383 4dgj_A Enteropeptidase catalyt 27.2 19 0.00064 35.4 1.2 74 637-718 28-113 (235)
384 3q6k_A 43.2 kDa salivary prote 27.1 4.1E+02 0.014 28.7 11.9 92 130-221 124-253 (381)
385 3f7f_A Nucleoporin NUP120; nuc 27.1 82 0.0028 37.3 6.7 36 110-147 224-259 (729)
386 2jde_A Urokinase-type plasmino 27.0 34 0.0011 34.5 3.0 72 637-718 56-145 (276)
387 1ddj_A Plasminogen; catalytic 26.8 35 0.0012 33.9 3.1 72 637-718 46-123 (247)
388 1bru_P Elastase, PPE; serine p 26.4 46 0.0016 32.9 3.9 70 637-719 32-115 (241)
389 2wg3_C Hedgehog-interacting pr 26.4 6.7E+02 0.023 27.5 20.1 99 72-171 16-159 (463)
390 4i8h_A Cationic trypsin, beta- 26.0 33 0.0011 33.3 2.7 67 637-718 27-105 (223)
391 3b7f_A Glycosyl hydrolase, BNR 25.7 5.8E+02 0.02 26.4 20.5 142 109-253 116-296 (394)
392 2z7f_E Leukocyte elastase; ser 25.7 30 0.001 33.6 2.3 72 637-719 28-110 (218)
393 2f91_A Hepatopancreas trypsin; 25.6 44 0.0015 32.9 3.6 74 637-719 32-118 (237)
394 1spj_A Kallikrein 1; serine pr 25.6 36 0.0012 33.5 2.9 16 637-652 28-44 (238)
395 1pq7_A Trypsin; ultra-high res 25.6 34 0.0012 33.4 2.7 69 637-719 28-106 (224)
396 4a9v_A PHOX; hydrolase, beta-p 25.5 1.8E+02 0.0062 33.5 9.0 60 193-255 477-550 (592)
397 2pka_A Kallikrein A; serine pr 24.8 26 0.00088 28.6 1.4 16 637-652 28-44 (80)
398 1lo6_A Kallikrein 6, HK6; seri 24.7 36 0.0012 33.3 2.7 16 637-652 28-44 (223)
399 1rtf_B (TC)-T-PA, two chain ti 24.3 36 0.0012 33.7 2.6 74 637-720 34-123 (252)
400 1ton_A Tonin; hydrolase(serine 23.9 39 0.0013 33.2 2.7 16 637-652 26-42 (235)
401 3f7f_A Nucleoporin NUP120; nuc 23.8 91 0.0031 36.9 6.2 36 152-190 224-259 (729)
402 3ncl_A Suppressor of tumorigen 23.6 44 0.0015 32.7 3.1 75 637-718 29-118 (241)
403 3h7t_A Group 3 allergen smipp- 23.5 39 0.0013 32.8 2.7 69 637-719 28-108 (235)
404 1azz_A Collagenase; complex (s 23.4 23 0.0008 34.8 1.0 17 637-653 28-45 (226)
405 3zwu_A Alkaline phosphatase PH 23.0 1.9E+02 0.0064 33.4 8.5 59 109-168 477-548 (592)
406 3mfj_A Cationic trypsin; serin 22.6 53 0.0018 32.1 3.5 67 637-718 27-105 (223)
407 3rm2_H Thrombin heavy chain; s 22.5 54 0.0018 32.3 3.5 74 637-718 30-120 (259)
408 4hvt_A Ritya.17583.B, post-pro 22.1 8.9E+02 0.031 28.1 14.4 112 109-221 130-278 (711)
409 1aut_C Activated protein C; se 22.0 50 0.0017 32.9 3.1 69 637-718 29-109 (250)
410 1fon_A Procarboxypeptidase A-S 21.7 22 0.00076 35.1 0.4 17 637-653 30-47 (240)
411 3h7o_A Group 3 allergen smipp- 21.4 31 0.0011 33.5 1.5 71 637-719 30-112 (228)
412 1fxy_A Coagulation factor XA-t 21.3 57 0.002 31.9 3.4 69 637-718 29-109 (228)
413 2bdy_A Thrombin; thrombin, com 20.9 73 0.0025 32.4 4.2 75 637-719 60-151 (289)
414 3mez_B Mannose-specific lectin 20.5 4.2E+02 0.014 23.0 9.5 51 195-257 59-109 (113)
415 3zwu_A Alkaline phosphatase PH 20.5 2.2E+02 0.0075 32.8 8.5 57 152-209 478-548 (592)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=1.8e-27 Score=274.65 Aligned_cols=262 Identities=14% Similarity=0.135 Sum_probs=199.2
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCeEEEEeCC----CeEEEEECCCCe
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGD----HTVKIIDCQTGS 140 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~------~L~gH~~sVtsVaFSpDG~~LASgs~D----GtVrVWDl~tg~ 140 (767)
...+++++.++.+|++++.|++|++||..++ .+.+|.+.|.+++|+|||++|++++.+ ++|++|| +++
T Consensus 61 ~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~ 138 (611)
T 1nr0_A 61 QTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGT 138 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCC
T ss_pred ceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCC
Confidence 4677889999999999999999999998643 356899999999999999999998875 4778887 466
Q ss_pred EEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEECCc-EEEEE
Q 004217 141 CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWR 218 (767)
Q Consensus 141 ~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~-V~VWD 218 (767)
.+..+.+|...|.+++|+|++...|++++.|++|++||..++++...+. |...|.+++|+|+|++|++++.|+ |++||
T Consensus 139 ~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence 6778899999999999999333479999999999999999988887764 889999999999999999999766 99999
Q ss_pred cCCCccccCCeEE-e------cCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCccC---------
Q 004217 219 YNMREETSSPRIV-L------RTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRY--------- 277 (767)
Q Consensus 219 l~t~~~~~~~~~l-~------~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~--------- 277 (767)
+.+++... .+ . +|...|++++|+|||++|++++. +||+..++....+.....+...
T Consensus 219 ~~~g~~~~---~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (611)
T 1nr0_A 219 GVDGTKTG---VFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ 295 (611)
T ss_dssp TTTCCEEE---ECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSS
T ss_pred CCCCcEee---eeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCC
Confidence 98887544 22 1 79999999999999998777654 8888766554443321111000
Q ss_pred ------CCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCC
Q 004217 278 ------PPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPS 351 (767)
Q Consensus 278 ------p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~ 351 (767)
....+.+|+...+. ..........++...+|+||+++++... ....+..||..+
T Consensus 296 ~l~s~s~d~~i~~~~~~~~~---~~~~~~gh~~~v~~l~~spdg~~l~s~s-----------------~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 296 ALVSISANGFINFVNPELGS---IDQVRYGHNKAITALSSSADGKTLFSAD-----------------AEGHINSWDIST 355 (611)
T ss_dssp CEEEEETTCCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTT
T ss_pred EEEEEeCCCcEEEEeCCCCC---cceEEcCCCCCEEEEEEeCCCCEEEEEe-----------------CCCcEEEEECCC
Confidence 11233444433222 1111223455677899999999998722 233578999988
Q ss_pred Cceeee
Q 004217 352 GQYELV 357 (767)
Q Consensus 352 ~q~~~~ 357 (767)
++....
T Consensus 356 ~~~~~~ 361 (611)
T 1nr0_A 356 GISNRV 361 (611)
T ss_dssp CCEEEC
T ss_pred Cceeee
Confidence 766543
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=6.6e-27 Score=252.58 Aligned_cols=180 Identities=14% Similarity=0.130 Sum_probs=154.6
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC--------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP--------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK 143 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~--------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~ 143 (767)
...+++..+ ..|++++.|++|++||+.+++ +.+|.+.|++++|+|||++|++|+.|++|+|||+++++++.
T Consensus 85 v~~~~~s~d-~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 85 VADLTWVGE-RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp EEEEEEETT-TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEEeCC-CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 555666665 578899999999999998763 33899999999999999999999999999999999999999
Q ss_pred EEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec---CCCCeEEEEEcCC-CCEEEEEECCc-EEEEE
Q 004217 144 VLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHAS-GELLAVASGHK-LYIWR 218 (767)
Q Consensus 144 ~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~---h~~~VtsVafSPd-G~~LAsgSdd~-V~VWD 218 (767)
.+.+|...|.+++|+|++..+|++++.|++|++||++++++...+. +...+.+++|+|+ +++|++|+.|+ |++||
T Consensus 164 ~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd 243 (344)
T 4gqb_B 164 SYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVD 243 (344)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred EEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEE
Confidence 9999999999999999555789999999999999999999887754 4567999999995 46888998666 99999
Q ss_pred cCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 219 YNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 219 l~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
+++++.+. .+.+|...|++++|+|++..++++++
T Consensus 244 ~~~~~~~~---~~~~h~~~v~~v~fsp~g~~~lasgs 277 (344)
T 4gqb_B 244 TKSTSCVL---SSAVHSQCVTGLVFSPHSVPFLASLS 277 (344)
T ss_dssp SCC--CCE---EEECCSSCEEEEEECSSSSCCEEEEE
T ss_pred CCCCcEEE---EEcCCCCCEEEEEEccCCCeEEEEEe
Confidence 99887654 78899999999999999965555544
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=2.3e-26 Score=252.40 Aligned_cols=244 Identities=18% Similarity=0.222 Sum_probs=199.4
Q ss_pred cceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEE
Q 004217 70 FSQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVL 145 (767)
Q Consensus 70 ~s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L 145 (767)
....++++..++..|++++.|++|++||..++ .+.+|.+.|.+++|+|++++|++|+.|++|+|||+.+++++..+
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~ 188 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE
Confidence 34777888899999999999999999999886 36799999999999999999999999999999999999999999
Q ss_pred ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCc
Q 004217 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGHK-LYIWRYNMRE 223 (767)
Q Consensus 146 ~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~ 223 (767)
.+|...|.+++|+| ++++|++|+.|++|++||+++++++..+ .|...|.+++|+|+|++|++++.|+ |++||+++.+
T Consensus 189 ~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 189 HGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267 (410)
T ss_dssp CCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred cCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 99999999999999 8999999999999999999999998876 4888999999999999999999766 9999999887
Q ss_pred cccCCeEEecCCCCeEEEEEccC--------------------CCeEEEEEe-----eCCcCCCCcceeEeecCCCcc--
Q 004217 224 ETSSPRIVLRTRRSLRAVHFHPH--------------------AAPLLLTAE-----VNDLDSSESSLTLATSPGYWR-- 276 (767)
Q Consensus 224 ~~~~~~~l~~h~~~VtsVaFSPD--------------------G~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~-- 276 (767)
... .+..|...|.+++|+|+ |.++++++. +||++.+.....+..+.+...
T Consensus 268 ~~~---~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v 344 (410)
T 1vyh_C 268 CKA---ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 344 (410)
T ss_dssp EEE---EECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred eee---EecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEE
Confidence 644 67789999999999997 455555543 888887665444433322210
Q ss_pred ------------CCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEE
Q 004217 277 ------------YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (767)
Q Consensus 277 ------------~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva 320 (767)
.....+.+|+...........+ ...++...+|+|++..|+.
T Consensus 345 ~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~---h~~~v~~l~~~~~~~~l~s 397 (410)
T 1vyh_C 345 LFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA---HEHFVTSLDFHKTAPYVVT 397 (410)
T ss_dssp EECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC---CSSCEEEEEECSSSSCEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC---CCCcEEEEEEcCCCCEEEE
Confidence 0124466666555444433332 3445667889999888876
No 4
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=4.6e-26 Score=241.06 Aligned_cols=193 Identities=15% Similarity=0.182 Sum_probs=165.1
Q ss_pred eEEEEEEc-CCCEEEEEeCCCeEEEEeCCCC---------CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeE
Q 004217 72 QIFEAGRD-ARRGLASWVEAESLHHLRPKYC---------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC 141 (767)
Q Consensus 72 ~~~vA~sd-~g~~LaSgs~DgsIrlWd~~t~---------~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~ 141 (767)
...+++.. ++..|++++.|++|++|++... .+.+|...|.+++|+||+++|++|+.|++|+|||+.+++.
T Consensus 20 V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~ 99 (319)
T 3frx_A 20 VTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGET 99 (319)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCe
Confidence 44566655 4589999999999999998532 3679999999999999999999999999999999999999
Q ss_pred EEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCC------CEEEEEECCc-E
Q 004217 142 LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASG------ELLAVASGHK-L 214 (767)
Q Consensus 142 l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG------~~LAsgSdd~-V 214 (767)
+..+.+|...|.+++|+| ++.+|++|+.|++|++||++.........|...|.+++|+|.+ .+|++++.++ |
T Consensus 100 ~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i 178 (319)
T 3frx_A 100 YQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMV 178 (319)
T ss_dssp EEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCE
T ss_pred eEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEE
Confidence 999999999999999999 8999999999999999999865555556799999999999954 4899998766 9
Q ss_pred EEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeE
Q 004217 215 YIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTL 268 (767)
Q Consensus 215 ~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l 268 (767)
++||+++.+... .+.+|...|++++|+|+|++|++++. +||+........+
T Consensus 179 ~~wd~~~~~~~~---~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 179 KAWNLNQFQIEA---DFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234 (319)
T ss_dssp EEEETTTTEEEE---EECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEECCcchhhe---eecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 999999876544 67789999999999999998877665 8888865544443
No 5
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=1.7e-26 Score=250.36 Aligned_cols=268 Identities=17% Similarity=0.181 Sum_probs=207.3
Q ss_pred CCCCCCcceecccccccccCCCccCcceeecccccceecCCcceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC-------
Q 004217 29 NHRNSRLRNVFGLLAQREVAPRTKHSSKRLLGETARKCSGSFSQIFEAGRDARRGLASWVEAESLHHLRPKYC------- 101 (767)
Q Consensus 29 ~~r~sk~rnVf~~~~kre~~~~~~~~sk~~wd~~~~~~~~s~s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~------- 101 (767)
-.|.|||||+|+...+++.++.+.+.....|+.....++.++ ...+++++.|+.|++|+....
T Consensus 5 ~~~~sk~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~g~i~v~~~~~~~~~~~~~ 74 (402)
T 2aq5_A 5 VVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKF----------MALICEASGGGAFLVLPLGKTGRVDKNV 74 (402)
T ss_dssp ---CCTTTTCEEEECCGGGSEESCCBCCCCCSSCSEEECSSE----------EEEEBCCSSSCCEEEEETTCCEECCTTC
T ss_pred ccCCCCCccccCcCCChhhcEecceeecCccCCCcEEECCCe----------EEEEEEEcCCCEEEEEECccCCCCCCCC
Confidence 468999999999999999999999998888887765554222 122335678999999998542
Q ss_pred -CCCCCCCCeEEEEECC-CCCeEEEEeCCCeEEEEECCCC-------eEEEEEccCCCCcEEEEEccCCCcEEEEEeCCC
Q 004217 102 -PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTG-------SCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDH 172 (767)
Q Consensus 102 -~L~gH~~sVtsVaFSp-DG~~LASgs~DGtVrVWDl~tg-------~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DG 172 (767)
.+.+|.+.|++++|+| ++++|++|+.|++|+|||+.++ +.+..+.+|...|.+++|+|++.++|++++.|+
T Consensus 75 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 75 PLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred ceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 3668999999999999 9999999999999999999987 567889999999999999993347999999999
Q ss_pred eEEEEECCCCeEEEee---cCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEE-ecCCCC-eEEEEEccC
Q 004217 173 EVRLWNASTAECIGSR---DFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIV-LRTRRS-LRAVHFHPH 246 (767)
Q Consensus 173 tVrIWDl~tg~~i~~l---~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l-~~h~~~-VtsVaFSPD 246 (767)
+|++||+++++.+..+ .|...|.+++|+|++++|++++.++ |++||+++++.+. .+ ..|... +.++.|+|+
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVA---EKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE---EEECSSCSSSCCEEEECST
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceee---eeccCCCCCcceEEEEcCC
Confidence 9999999999998887 3889999999999999999999665 9999999987654 44 567665 899999999
Q ss_pred CCeEEEEE---e-----eCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEE
Q 004217 247 AAPLLLTA---E-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERI 318 (767)
Q Consensus 247 G~~LlaSg---s-----vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rI 318 (767)
+++++++. . +||++........ . .......+..+.|+||++.+
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~---------------------------~--~~~~~~~v~~~~~s~~~~~l 282 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEEPLSL---------------------------Q--ELDTSSGVLLPFFDPDTNIV 282 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSSCSEE---------------------------E--ECCCCSSCEEEEEETTTTEE
T ss_pred CcEEEEeccCCCCceEEEEcCccccCCceE---------------------------E--eccCCCceeEEEEcCCCCEE
Confidence 98666551 1 4544432221111 0 01122345678999999999
Q ss_pred EEeecCCCCCCcccccccccCCceeeeeccCCCCce
Q 004217 319 SLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQY 354 (767)
Q Consensus 319 va~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~ 354 (767)
++.. +....+.+|+..+++.
T Consensus 283 ~~~g----------------~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 283 YLCG----------------KGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEEE----------------TTCSCEEEEEECSSTT
T ss_pred EEEE----------------cCCCeEEEEEecCCCc
Confidence 7622 1223577888877763
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.95 E-value=6e-26 Score=241.41 Aligned_cols=231 Identities=14% Similarity=0.168 Sum_probs=186.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcE
Q 004217 80 ARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (767)
Q Consensus 80 ~g~~LaSgs~DgsIrlWd~~t~------~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~ 153 (767)
++..|++++.|++|++|+.... .+.+|...|.+++|++++.++++++.|++|+|||+.+++.+..+..|...+.
T Consensus 47 ~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~ 126 (321)
T 3ow8_A 47 NSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAW 126 (321)
T ss_dssp --CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCC
T ss_pred CCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEE
Confidence 5678999999999999998754 3689999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEE
Q 004217 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIV 231 (767)
Q Consensus 154 sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l 231 (767)
+++|+| ++++|++++.|++|++||+++++....+. +...|.+++|+|+|++|++++.++ |++||+++++.+. .+
T Consensus 127 ~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~---~~ 202 (321)
T 3ow8_A 127 TLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH---TL 202 (321)
T ss_dssp CEEECT-TSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE---EE
T ss_pred EEEECC-CCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE---EE
Confidence 999999 99999999999999999999998877754 678899999999999999999766 9999999987654 67
Q ss_pred ecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCccC-----------------CCCeEEEecCCC
Q 004217 232 LRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRY-----------------PPPVICMAGAHS 289 (767)
Q Consensus 232 ~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~-----------------p~~~v~l~~~~S 289 (767)
.+|...|++++|+|++++|++++. +||++.......+ .+|... ....+.+|+...
T Consensus 203 ~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~---~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 203 EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL---SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEE---cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 789999999999999997776654 7888765544333 333221 113345555443
Q ss_pred CCCCceeeccCCCCCCceeeEEecCCCEEEE
Q 004217 290 SSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (767)
Q Consensus 290 sd~~~L~sg~~~~slpil~psFSpDg~rIva 320 (767)
+...... .....+++.++|++|+.+|+.
T Consensus 280 ~~~~~~~---~~h~~~v~~v~~s~~g~~l~s 307 (321)
T 3ow8_A 280 RTCVHTF---FDHQDQVWGVKYNGNGSKIVS 307 (321)
T ss_dssp TEEEEEE---CCCSSCEEEEEECTTSSEEEE
T ss_pred CEEEEEE---cCCCCcEEEEEECCCCCEEEE
Confidence 3222222 223456677889999988886
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.95 E-value=1.2e-25 Score=236.01 Aligned_cols=237 Identities=14% Similarity=0.148 Sum_probs=192.4
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
...++++.++..|++++.|++|++||..++ .+..|...|.+++|++++++|++|+.|++|+|||+.+++++..+.+
T Consensus 16 V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~ 95 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA 95 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC
Confidence 667888899999999999999999999886 4668999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeE-EEee-cCCCCeEEEEEcC-CCCEEEEEECCc-EEEEEcCCCc
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC-IGSR-DFYRPIASIAFHA-SGELLAVASGHK-LYIWRYNMRE 223 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~-i~~l-~h~~~VtsVafSP-dG~~LAsgSdd~-V~VWDl~t~~ 223 (767)
|...|.+++|+| ++++|++|+.|++|++||++++.. ...+ .|...|.+++|+| ++.+|++|+.|+ |++||+++..
T Consensus 96 h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 96 HPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp CSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred CCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 999999999999 899999999999999999998744 4444 5889999999999 678999999666 9999998776
Q ss_pred cccCCeEEecCCCCeEEEEEcc--CCCeEEEEEe-----eCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCcee
Q 004217 224 ETSSPRIVLRTRRSLRAVHFHP--HAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLA 296 (767)
Q Consensus 224 ~~~~~~~l~~h~~~VtsVaFSP--DG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~ 296 (767)
... .....|...|..+.|+| ++.+|++++. +||++.... +.+..+|
T Consensus 175 ~~~--~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~---~~~~~~h---------------------- 227 (304)
T 2ynn_A 175 PNF--TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC---VATLEGH---------------------- 227 (304)
T ss_dssp CSE--EEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE---EEEEECC----------------------
T ss_pred ccc--eeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc---ceeeCCC----------------------
Confidence 432 23445678899999987 6666666554 666664332 2222233
Q ss_pred eccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeeec
Q 004217 297 EEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVLS 359 (767)
Q Consensus 297 sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~~ 359 (767)
..++....|+|++..|+.. +....+.+||..+++....+.
T Consensus 228 ------~~~v~~~~~~p~~~~l~s~-----------------s~Dg~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 228 ------MSNVSFAVFHPTLPIIISG-----------------SEDGTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp ------SSCEEEEEECSSSSEEEEE-----------------ETTSCEEEEETTTCCEEEEEC
T ss_pred ------CCCEEEEEECCCCCEEEEE-----------------cCCCeEEEEECCCCceeeecc
Confidence 2234467899999988762 233458899999988887774
No 8
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=3.6e-25 Score=230.87 Aligned_cols=243 Identities=20% Similarity=0.264 Sum_probs=195.0
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
...+++..++..|++++.|+.|++|+...+ .+.+|...|.+++|+|++++|++++.|+.|++||+++++++..+.+
T Consensus 26 v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 105 (312)
T 4ery_A 26 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG 105 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcC
Confidence 566778889999999999999999999876 3679999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccc
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREET 225 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~ 225 (767)
|...|.+++|+| ++++|++++.|++|++||+++++++..+. |...|.+++|+|++++|++++.++ |++||+++++..
T Consensus 106 ~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~ 184 (312)
T 4ery_A 106 HSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 184 (312)
T ss_dssp CSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcee
Confidence 999999999999 89999999999999999999999888765 788999999999999999999666 999999988754
Q ss_pred cCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCc-----------------cCCCCeEE
Q 004217 226 SSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYW-----------------RYPPPVIC 283 (767)
Q Consensus 226 ~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~-----------------~~p~~~v~ 283 (767)
. .....+...+..++|+|+++++++++. +||++..+....+....+.. ......+.
T Consensus 185 ~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~ 262 (312)
T 4ery_A 185 K--TLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 262 (312)
T ss_dssp E--EECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEE
T ss_pred e--EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEE
Confidence 4 223456778999999999998887664 88887655433332221110 00123456
Q ss_pred EecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEE
Q 004217 284 MAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (767)
Q Consensus 284 l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva 320 (767)
+|+.......... .....+++..+|+|++..++.
T Consensus 263 vwd~~~~~~~~~~---~~h~~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 263 IWNLQTKEIVQKL---QGHTDVVISTACHPTENIIAS 296 (312)
T ss_dssp EEETTTCCEEEEE---CCCSSCEEEEEECSSSSEEEE
T ss_pred EEECCCchhhhhh---hccCCcEEEEeecCcCCceEE
Confidence 6665444322222 234456677889999888876
No 9
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.95 E-value=9.5e-25 Score=269.21 Aligned_cols=194 Identities=20% Similarity=0.305 Sum_probs=160.0
Q ss_pred cceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEE
Q 004217 70 FSQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVL 145 (767)
Q Consensus 70 ~s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L 145 (767)
.....++++.++..+++++.|++|++||..++ .+.+|...|.+++|+||+++|++++.|++|+|||+.+++.+..+
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 695 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTY 695 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 34677889999999999999999999999887 46799999999999999999999999999999999999999999
Q ss_pred ccCCCCcEEEEEccC-CCcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCC
Q 004217 146 HGHRRTPWVVRFHPL-NPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGHK-LYIWRYNMR 222 (767)
Q Consensus 146 ~gH~~~V~sLafsP~-dg~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~ 222 (767)
.+|...|.+++|+|. +..++++|+.|++|++||+.+++++..+ .|...|.+++|+|++++|++++.++ |++||++++
T Consensus 696 ~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 696 DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence 999999999999984 3458999999999999999999988875 5889999999999999999999766 999999877
Q ss_pred ccccCCe----------EEecCCCCeEEEEEccCCCeEEEEEe----eCCcCCCC
Q 004217 223 EETSSPR----------IVLRTRRSLRAVHFHPHAAPLLLTAE----VNDLDSSE 263 (767)
Q Consensus 223 ~~~~~~~----------~l~~h~~~VtsVaFSPDG~~LlaSgs----vwdl~s~~ 263 (767)
+...... ....+...+.+++|+|+|+.+++++. +|++....
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~ 830 (1249)
T 3sfz_A 776 NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSG 830 (1249)
T ss_dssp EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCC
T ss_pred cccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCC
Confidence 5432100 00111235666777777776655543 55555443
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=1e-25 Score=240.98 Aligned_cols=187 Identities=22% Similarity=0.266 Sum_probs=161.7
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC-------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCC--eEE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP-------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG--SCL 142 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~-------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg--~~l 142 (767)
...++++.++..|++++.|++|++|+..... ..+|...|.+++|+|++++|++|+.|++|+|||+.++ +++
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~ 98 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECV 98 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEE
Confidence 5567888999999999999999999997652 3689999999999999999999999999999999876 467
Q ss_pred EEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCe---EEEee-cCCCCeEEEEEcCCCCEEEEEECCc-EEEE
Q 004217 143 KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAE---CIGSR-DFYRPIASIAFHASGELLAVASGHK-LYIW 217 (767)
Q Consensus 143 ~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~---~i~~l-~h~~~VtsVafSPdG~~LAsgSdd~-V~VW 217 (767)
..+.+|...|.+++|+| ++++|++|+.|++|++||++++. ++..+ .|...|.+++|+|++++|++++.|+ |++|
T Consensus 99 ~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w 177 (345)
T 3fm0_A 99 TTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY 177 (345)
T ss_dssp EEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEE
T ss_pred EEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEE
Confidence 88999999999999999 99999999999999999998764 33333 4888999999999999999999766 9999
Q ss_pred EcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcC
Q 004217 218 RYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLD 260 (767)
Q Consensus 218 Dl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~ 260 (767)
|+++.+... ...+.+|...|++++|+|+|++|++++. +|+..
T Consensus 178 ~~~~~~~~~-~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 178 REEEDDWVC-CATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEETTEEEE-EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EecCCCEEE-EEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 998765322 2357789999999999999998777665 67653
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=4.6e-25 Score=235.06 Aligned_cols=177 Identities=17% Similarity=0.204 Sum_probs=153.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-----------CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccC
Q 004217 80 ARRGLASWVEAESLHHLRPKYC-----------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH 148 (767)
Q Consensus 80 ~g~~LaSgs~DgsIrlWd~~t~-----------~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH 148 (767)
++..|++++.|++|++||+... .+.+|...|.+++|+|++++|++|+.|++|+|||+++++.+..+.+|
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 7889999999999999998642 36799999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee---cCCCCeEEEEEcCCC----------CEEEEEECCc-E
Q 004217 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR---DFYRPIASIAFHASG----------ELLAVASGHK-L 214 (767)
Q Consensus 149 ~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l---~h~~~VtsVafSPdG----------~~LAsgSdd~-V 214 (767)
...|.+++|+| ++++|++++.|++|++||+......... .|...|.+++|+|++ .+|++++.|+ |
T Consensus 118 ~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i 196 (343)
T 2xzm_R 118 QSEVYSVAFSP-DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRL 196 (343)
T ss_dssp CSCEEEEEECS-STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEE
T ss_pred CCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEE
Confidence 99999999999 8999999999999999999854443333 478899999999987 7899999666 9
Q ss_pred EEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCC
Q 004217 215 YIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDS 261 (767)
Q Consensus 215 ~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s 261 (767)
++||.. .+. ...+.+|...|++++|+|+|++|++++. +||+..
T Consensus 197 ~iwd~~-~~~---~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 197 KVWNTN-FQI---RYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EEEETT-TEE---EEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred EEEcCC-Cce---eEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 999943 222 2357789999999999999998877664 888843
No 12
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.94 E-value=5.8e-25 Score=234.35 Aligned_cols=242 Identities=14% Similarity=0.139 Sum_probs=191.4
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCC----eEE
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG----SCL 142 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg----~~l 142 (767)
....++++.++..|++++.|++|++||..++ .+..|...|.+++|+|++++|++|+.|+.|++||+.++ +..
T Consensus 57 ~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~ 136 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVS 136 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeE
Confidence 3566778889999999999999999999876 35689999999999999999999999999999999875 456
Q ss_pred EEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEECCc-EEEEEcC
Q 004217 143 KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYN 220 (767)
Q Consensus 143 ~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~ 220 (767)
..+.+|.+.|.++.|++ ++ .+++++.|++|++||+++++++..+. |...|.+++|+|++++|++|+.|+ |++||++
T Consensus 137 ~~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~ 214 (340)
T 1got_B 137 RELAGHTGYLSCCRFLD-DN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 214 (340)
T ss_dssp EEEECCSSCEEEEEEEE-TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEecCCCccEEEEEECC-CC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 77899999999999998 54 58999999999999999999988865 889999999999999999999666 9999999
Q ss_pred CCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCcc-----------------CC
Q 004217 221 MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR-----------------YP 278 (767)
Q Consensus 221 t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~-----------------~p 278 (767)
++.... .+.+|...|++++|+|++++|++++. +||++.......+. ..++.. ..
T Consensus 215 ~~~~~~---~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~l~~g~~ 290 (340)
T 1got_B 215 EGMCRQ---TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYD 290 (340)
T ss_dssp TCSEEE---EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeEE---EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc-cCCcccceEEEEECCCCCEEEEECC
Confidence 887644 67789999999999999998777664 88887544332221 111100 01
Q ss_pred CCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEe
Q 004217 279 PPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQ 321 (767)
Q Consensus 279 ~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~ 321 (767)
...+.+|+........... ....++...+|+||+..|+..
T Consensus 291 d~~i~vwd~~~~~~~~~~~---~h~~~v~~~~~s~dg~~l~s~ 330 (340)
T 1got_B 291 DFNCNVWDALKADRAGVLA---GHDNRVSCLGVTDDGMAVATG 330 (340)
T ss_dssp TSEEEEEETTTCCEEEEEE---CCSSCEEEEEECTTSSCEEEE
T ss_pred CCeEEEEEcccCcEeeEee---cCCCcEEEEEEcCCCCEEEEE
Confidence 2345556544433322222 244567778899999888863
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.94 E-value=3.7e-25 Score=242.83 Aligned_cols=241 Identities=21% Similarity=0.244 Sum_probs=195.4
Q ss_pred ceeeccccccee----c-CCcceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEE
Q 004217 55 SKRLLGETARKC----S-GSFSQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLAST 125 (767)
Q Consensus 55 sk~~wd~~~~~~----~-~s~s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASg 125 (767)
..++|+.....+ . .......+++..++..|++++.|++|++||..+. .+.+|...|.+++|+|++++|++|
T Consensus 131 ~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~ 210 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSA 210 (410)
T ss_dssp CEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEE
T ss_pred eEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEE
Confidence 456676443221 1 2234677888889999999999999999999875 478999999999999999999999
Q ss_pred eCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCC--
Q 004217 126 HGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHAS-- 202 (767)
Q Consensus 126 s~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPd-- 202 (767)
+.|++|++||+.+++++..+.+|...|.++.|+| ++.+|++|+.|++|++||++++++...+ .|...|.+++|+|+
T Consensus 211 s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 289 (410)
T 1vyh_C 211 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESS 289 (410)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCG
T ss_pred eCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCccc
Confidence 9999999999999999999999999999999999 9999999999999999999999988876 58899999999996
Q ss_pred ------------------CCEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCC
Q 004217 203 ------------------GELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VND 258 (767)
Q Consensus 203 ------------------G~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwd 258 (767)
|.+|++|+.|+ |++||++++..+. .+.+|...|++++|+|+|++|++++. +||
T Consensus 290 ~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~---~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd 366 (410)
T 1vyh_C 290 YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM---TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 366 (410)
T ss_dssp GGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEE---EEECCSSCEEEEEECSSSSCEEEEETTTEEEEEC
T ss_pred ccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEE---EEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 67899999766 9999999987655 67889999999999999998887765 888
Q ss_pred cCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCceeeccCCCCCCce
Q 004217 259 LDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFL 307 (767)
Q Consensus 259 l~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil 307 (767)
+........+. +|.. .+..+.. .++...++++..+..+.+|
T Consensus 367 ~~~~~~~~~~~---~h~~---~v~~l~~--~~~~~~l~sgs~D~~i~vW 407 (410)
T 1vyh_C 367 YKNKRCMKTLN---AHEH---FVTSLDF--HKTAPYVVTGSVDQTVKVW 407 (410)
T ss_dssp CTTSCCCEEEE---CCSS---CEEEEEE--CSSSSCEEEEETTSEEEEE
T ss_pred CCCCceEEEEc---CCCC---cEEEEEE--cCCCCEEEEEeCCCcEEEE
Confidence 87766555543 4422 2333332 3445566666555444443
No 14
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.94 E-value=5.9e-25 Score=233.75 Aligned_cols=226 Identities=16% Similarity=0.164 Sum_probs=188.2
Q ss_pred cceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEE
Q 004217 70 FSQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVL 145 (767)
Q Consensus 70 ~s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L 145 (767)
.....+++..++..+++++.|++|++||+.++ .+..|...+.+++|+||+++|++++.|+.|++||+++++....+
T Consensus 81 ~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~ 160 (321)
T 3ow8_A 81 LGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL 160 (321)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEe
Confidence 34667778888999999999999999999886 35678889999999999999999999999999999999999999
Q ss_pred ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCc
Q 004217 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYNMRE 223 (767)
Q Consensus 146 ~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~ 223 (767)
..|...|.+++|+| ++++|++|+.|++|++||+++++.+..+. |...|.+++|+|++++|++++.|+ |++||+++.+
T Consensus 161 ~~~~~~v~~~~~sp-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 161 DTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN 239 (321)
T ss_dssp ECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC
T ss_pred cCCCceEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc
Confidence 99999999999999 99999999999999999999999988875 888999999999999999999766 9999999887
Q ss_pred cccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCceeec
Q 004217 224 ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEE 298 (767)
Q Consensus 224 ~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg 298 (767)
... .+.+|...|.+++|+|++++|++++. +||+..... +.+..+|.. .+..+.. +++...++++
T Consensus 240 ~~~---~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~---~~~~~~h~~---~v~~v~~--s~~g~~l~s~ 308 (321)
T 3ow8_A 240 LAG---TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC---VHTFFDHQD---QVWGVKY--NGNGSKIVSV 308 (321)
T ss_dssp EEE---EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE---EEEECCCSS---CEEEEEE--CTTSSEEEEE
T ss_pred eeE---EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEE---EEEEcCCCC---cEEEEEE--CCCCCEEEEE
Confidence 644 67889999999999999998777665 888876554 344445532 2333322 3455566666
Q ss_pred cCCCCCCce
Q 004217 299 VPLITPPFL 307 (767)
Q Consensus 299 ~~~~slpil 307 (767)
..+..+.+|
T Consensus 309 ~~d~~i~vw 317 (321)
T 3ow8_A 309 GDDQEIHIY 317 (321)
T ss_dssp ETTCCEEEE
T ss_pred eCCCeEEEE
Confidence 555444444
No 15
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.94 E-value=3.3e-23 Score=233.13 Aligned_cols=179 Identities=27% Similarity=0.347 Sum_probs=158.3
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC---CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~---~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
...+++++.+++.|++++.|++|++||.... .+.+|...|++++|+||+++|++++.|++|+|||+ +++++..+.+
T Consensus 18 ~V~~~a~spdg~~las~~~d~~v~iWd~~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~~ 96 (577)
T 2ymu_A 18 SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG 96 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECC
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEEC
Confidence 3667889999999999999999999997543 47799999999999999999999999999999995 5788999999
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCcccc
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETS 226 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~ 226 (767)
|...|.+++|+| ++++|++++.|+.+++|+...........+...+..+.|+|+++.++.++.+. +++|+......
T Consensus 97 ~~~~v~~~~~s~-d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 173 (577)
T 2ymu_A 97 HSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLL-- 173 (577)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEE--
T ss_pred CCCCEEEEEECC-CCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceeccccceeee--
Confidence 999999999999 99999999999999999998877776677889999999999999999998766 88888654432
Q ss_pred CCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 227 SPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 227 ~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
.....|...|..+.|+|+++++++++.
T Consensus 174 --~~~~~~~~~v~~~~~~~~~~~l~~~~~ 200 (577)
T 2ymu_A 174 --QTLTGHSSSVWGVAFSPDGQTIASASD 200 (577)
T ss_dssp --EEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred --eeccCCCcceeeeeecCCCCEEEEEcC
Confidence 346778999999999999998877664
No 16
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.94 E-value=9.8e-25 Score=228.98 Aligned_cols=189 Identities=16% Similarity=0.224 Sum_probs=164.1
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCC-eEEEEE
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG-SCLKVL 145 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg-~~l~~L 145 (767)
....+.+..++..|++++.|++|++||..++ .+.+|...|.+++|+|++++|++|+.|++|+|||++++ .....+
T Consensus 57 ~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 136 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (304)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE
T ss_pred cEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh
Confidence 3567778889999999999999999999887 36799999999999999999999999999999999887 556788
Q ss_pred ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee--cCCCCeEEEEEcC--CCCEEEEEECCc-EEEEEcC
Q 004217 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFHA--SGELLAVASGHK-LYIWRYN 220 (767)
Q Consensus 146 ~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l--~h~~~VtsVafSP--dG~~LAsgSdd~-V~VWDl~ 220 (767)
.+|...|.+++|+|.++.+|++|+.|++|++||++++.....+ .+...+..++|+| ++++|++++.|+ |++||++
T Consensus 137 ~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~ 216 (304)
T 2ynn_A 137 EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (304)
T ss_dssp CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETT
T ss_pred cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC
Confidence 9999999999999967889999999999999999887765543 4667899999987 678999999766 9999999
Q ss_pred CCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCC
Q 004217 221 MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSS 262 (767)
Q Consensus 221 t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~ 262 (767)
+++.+. .+.+|...|.+++|+|++++|++++. +||+...
T Consensus 217 ~~~~~~---~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 217 TKSCVA---TLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp TTEEEE---EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred CCccce---eeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 987655 77899999999999999997776654 5665543
No 17
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.94 E-value=3.7e-25 Score=238.93 Aligned_cols=181 Identities=15% Similarity=0.138 Sum_probs=157.8
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCC-eEEEEeCCCeEEEEECCCCeEEEEE
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGK-TLASTHGDHTVKIIDCQTGSCLKVL 145 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~-~LASgs~DGtVrVWDl~tg~~l~~L 145 (767)
....++++.++..|++++.|++|++||+.++ .+.+|...|.+++|++++. +|++|+.|++|+|||+++++....+
T Consensus 129 ~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 208 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI 208 (344)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeee
Confidence 4677888899999999999999999999887 4779999999999999875 7899999999999999999988877
Q ss_pred c--cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCC-CEEEEEECCc-EEEEEcC
Q 004217 146 H--GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASG-ELLAVASGHK-LYIWRYN 220 (767)
Q Consensus 146 ~--gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG-~~LAsgSdd~-V~VWDl~ 220 (767)
. .|...+.+++|+|.++++|++|+.|++|++||+++++++..+. |...|++++|+|+| ++|++|+.|+ |+|||++
T Consensus 209 ~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~ 288 (344)
T 4gqb_B 209 GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSS 288 (344)
T ss_dssp C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECC
Confidence 4 4566789999999778899999999999999999999888764 88999999999998 5899999766 9999999
Q ss_pred CCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 221 MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 221 t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
+++.. .+.+|.+.|++++|+|+++.++++++
T Consensus 289 ~~~~~----~~~~H~~~V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 289 LSELF----RSQAHRDFVRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp CCEEE----EECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred CCcEE----EEcCCCCCEEEEEEeCCCCeEEEEEc
Confidence 88643 46789999999999999998887765
No 18
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.94 E-value=4.6e-24 Score=223.15 Aligned_cols=182 Identities=15% Similarity=0.138 Sum_probs=151.9
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECC--CCCeEEEEeCCCeEEEEECCCCe--E
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTGS--C 141 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~------~L~gH~~sVtsVaFSp--DG~~LASgs~DGtVrVWDl~tg~--~ 141 (767)
...++++.+++.|++++.|++|++|++... .+.+|.+.|.+++|++ ++++|++|+.|++|+|||+++++ .
T Consensus 12 V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~ 91 (297)
T 2pm7_B 12 IHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQ 91 (297)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCC
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEE
Confidence 556778889999999999999999998642 4679999999999987 48999999999999999999874 5
Q ss_pred EEEEccCCCCcEEEEEccCC--CcEEEEEeCCCeEEEEECCCCeE---EEeecCCCCeEEEEEcCC-------------C
Q 004217 142 LKVLHGHRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTAEC---IGSRDFYRPIASIAFHAS-------------G 203 (767)
Q Consensus 142 l~~L~gH~~~V~sLafsP~d--g~lLaSgS~DGtVrIWDl~tg~~---i~~l~h~~~VtsVafSPd-------------G 203 (767)
+..+.+|...|.+++|+| + +.+|++++.|++|++||++++.. .....|...|.+++|+|+ +
T Consensus 92 ~~~~~~h~~~v~~v~~~p-~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~ 170 (297)
T 2pm7_B 92 IAVHAVHSASVNSVQWAP-HEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 170 (297)
T ss_dssp CEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------C
T ss_pred EEEeecCCCceeEEEeCc-CCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCc
Confidence 677889999999999999 5 78999999999999999987632 223468899999999997 5
Q ss_pred CEEEEEECCc-EEEEEcCCCcccc-CCeEEecCCCCeEEEEEccCC---CeEEEEE
Q 004217 204 ELLAVASGHK-LYIWRYNMREETS-SPRIVLRTRRSLRAVHFHPHA---APLLLTA 254 (767)
Q Consensus 204 ~~LAsgSdd~-V~VWDl~t~~~~~-~~~~l~~h~~~VtsVaFSPDG---~~LlaSg 254 (767)
++|++|+.|+ |++||+++.+... ....+.+|...|++++|+|++ .+|++++
T Consensus 171 ~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 171 RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS 226 (297)
T ss_dssp CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE
Confidence 7999999666 9999998765211 123567899999999999996 5454444
No 19
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.94 E-value=1.4e-24 Score=239.15 Aligned_cols=197 Identities=17% Similarity=0.134 Sum_probs=161.9
Q ss_pred ceEEEEEEc-CCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECC-CCCeEEEEeCCCeEEEEECCCCeEE
Q 004217 71 SQIFEAGRD-ARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCL 142 (767)
Q Consensus 71 s~~~vA~sd-~g~~LaSgs~DgsIrlWd~~t~------~L~gH~~sVtsVaFSp-DG~~LASgs~DGtVrVWDl~tg~~l 142 (767)
.+.++++.. ++..|++|+.||.|++||+.++ ++.+|.+.|++|+|+| ++++|++|+.|++|+|||++++...
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR 200 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence 367788875 6778999999999999999765 3568999999999998 7899999999999999999877644
Q ss_pred EEEccC--CCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCC-EEEEEECCc-EEEEE
Q 004217 143 KVLHGH--RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGE-LLAVASGHK-LYIWR 218 (767)
Q Consensus 143 ~~L~gH--~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~-~LAsgSdd~-V~VWD 218 (767)
.....| ...+.+++|+| ++++|++|+.||+|++||++.........|...|.+++|+|++. +|++++.|+ |+|||
T Consensus 201 ~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd 279 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWD 279 (435)
T ss_dssp EEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEE
T ss_pred EEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEe
Confidence 444333 34578999999 99999999999999999997654444456899999999999986 788888665 99999
Q ss_pred cCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeE
Q 004217 219 YNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTL 268 (767)
Q Consensus 219 l~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l 268 (767)
+++.+.........+|...|++++|+|||++|++++. +|++..++....+
T Consensus 280 ~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 280 LRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGL 334 (435)
T ss_dssp TTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEE
T ss_pred cccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEE
Confidence 9987765544455689999999999999998887765 8888877665444
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.94 E-value=1.2e-24 Score=234.82 Aligned_cols=180 Identities=14% Similarity=0.117 Sum_probs=150.4
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC--------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP--------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK 143 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~--------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~ 143 (767)
...+++..++. +++++.|++|++||+.+++ ..+|...|++++|+||+++|++|+.|++|+|||+++++++.
T Consensus 97 V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~ 175 (357)
T 4g56_B 97 VTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLK 175 (357)
T ss_dssp EEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 56677777664 5567889999999997752 33899999999999999999999999999999999999999
Q ss_pred EEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee---cCCCCeEEEEEcCCC-CEEEEEECCc-EEEEE
Q 004217 144 VLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR---DFYRPIASIAFHASG-ELLAVASGHK-LYIWR 218 (767)
Q Consensus 144 ~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l---~h~~~VtsVafSPdG-~~LAsgSdd~-V~VWD 218 (767)
.+.+|...|.+++|+|.+..++++++.|++|++||++++++...+ .+...+.+++|+|++ .+|++|+.++ |++||
T Consensus 176 ~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd 255 (357)
T 4g56_B 176 SYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVN 255 (357)
T ss_dssp EECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEE
T ss_pred EEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEE
Confidence 999999999999999955568999999999999999998877664 356789999999985 6888888665 99999
Q ss_pred cCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 219 YNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 219 l~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
+++++... .+..|...|++++|+|++..++++++
T Consensus 256 ~~~~~~~~---~~~~~~~~v~~l~~sp~~~~~lasgs 289 (357)
T 4g56_B 256 IKNPDSAQ---TSAVHSQNITGLAYSYHSSPFLASIS 289 (357)
T ss_dssp SSCGGGCE---EECCCSSCEEEEEECSSSSCCEEEEE
T ss_pred CCCCcEeE---EEeccceeEEEEEEcCCCCCEEEEEe
Confidence 99887654 77889999999999999865555544
No 21
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=2.5e-24 Score=234.32 Aligned_cols=251 Identities=20% Similarity=0.242 Sum_probs=190.0
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC----CCCCC------------------CCeEEEEECCCCCeEEEEeCC
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYCP----LSPPP------------------RSTIAAAFSPDGKTLASTHGD 128 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~----L~gH~------------------~sVtsVaFSpDG~~LASgs~D 128 (767)
...+++++.++..|++++ ++.+++|+..+++ +..|. ..|.+++|+|||++|++|+.|
T Consensus 66 ~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d 144 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAED 144 (393)
T ss_dssp CCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCC
Confidence 356788889999999986 7899999998763 33332 249999999999999999999
Q ss_pred CeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcC-CCCEEE
Q 004217 129 HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHA-SGELLA 207 (767)
Q Consensus 129 GtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSP-dG~~LA 207 (767)
++|+|||+.+++.+..+.+|...|.+++|+| ++++|++++.|++|++||++++++...+.+...+.+++|+| ++++|+
T Consensus 145 ~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 223 (393)
T 1erj_A 145 RLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIA 223 (393)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEE
T ss_pred CeEEEEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEE
Confidence 9999999999999999999999999999999 89999999999999999999999998888889999999999 899999
Q ss_pred EEECCc-EEEEEcCCCccccCC----eEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCccC
Q 004217 208 VASGHK-LYIWRYNMREETSSP----RIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRY 277 (767)
Q Consensus 208 sgSdd~-V~VWDl~t~~~~~~~----~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~ 277 (767)
+++.++ |++||+++++..... ....+|...|++++|+|+|++|++++. +||++..........
T Consensus 224 ~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~------- 296 (393)
T 1erj_A 224 AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT------- 296 (393)
T ss_dssp EEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------------
T ss_pred EEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC-------
Confidence 999766 999999987654311 112578999999999999998777654 677664322111000
Q ss_pred CCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeee
Q 004217 278 PPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELV 357 (767)
Q Consensus 278 p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~ 357 (767)
+.. ........ .....+...+|++++.+|+.. +....+.+||..+++....
T Consensus 297 ~~~---------~~~~~~~~---~h~~~v~~~~~~~~~~~l~sg-----------------s~D~~v~iwd~~~~~~~~~ 347 (393)
T 1erj_A 297 PNS---------GTCEVTYI---GHKDFVLSVATTQNDEYILSG-----------------SKDRGVLFWDKKSGNPLLM 347 (393)
T ss_dssp -------------CEEEEEE---CCSSCEEEEEECGGGCEEEEE-----------------ETTSEEEEEETTTCCEEEE
T ss_pred CCC---------CcceEEEe---cccCcEEEEEECCCCCEEEEE-----------------eCCCeEEEEECCCCeEEEE
Confidence 000 00000011 122345678999999988862 2334688999988887766
Q ss_pred ec
Q 004217 358 LS 359 (767)
Q Consensus 358 ~~ 359 (767)
+.
T Consensus 348 l~ 349 (393)
T 1erj_A 348 LQ 349 (393)
T ss_dssp EE
T ss_pred EC
Confidence 63
No 22
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.93 E-value=2.6e-24 Score=229.34 Aligned_cols=224 Identities=17% Similarity=0.169 Sum_probs=182.4
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC--------CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEE
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC--------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCL 142 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~--------~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l 142 (767)
....+++..++..|++++.|+.|++|++.+. .+.+|.+.|.++.|++++. |++++.|++|++||+++++.+
T Consensus 99 ~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~ 177 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQT 177 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEE
Confidence 3667788899999999999999999998764 2568999999999998775 889999999999999999999
Q ss_pred EEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEECCc-EEEEEcC
Q 004217 143 KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYN 220 (767)
Q Consensus 143 ~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~ 220 (767)
..+.+|...|.+++|+| ++++|++|+.|++|++||+++++++..+. |...|.+++|+|++++|++++.|+ |++||++
T Consensus 178 ~~~~~h~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~ 256 (340)
T 1got_B 178 TTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256 (340)
T ss_dssp EEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 99999999999999999 89999999999999999999999888865 889999999999999999999766 9999999
Q ss_pred CCccccCCeEEe--cCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCC
Q 004217 221 MREETSSPRIVL--RTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHP 293 (767)
Q Consensus 221 t~~~~~~~~~l~--~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~ 293 (767)
+.+... .+. .+...|.+++|+|+|++|++++. +||+...+... ...+|.. ++.++.. +++..
T Consensus 257 ~~~~~~---~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~---~~~~h~~---~v~~~~~--s~dg~ 325 (340)
T 1got_B 257 ADQELM---TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG---VLAGHDN---RVSCLGV--TDDGM 325 (340)
T ss_dssp TTEEEE---EECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE---EEECCSS---CEEEEEE--CTTSS
T ss_pred CCcEEE---EEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEee---EeecCCC---cEEEEEE--cCCCC
Confidence 876543 222 23457999999999998777664 78887655443 3445532 3334433 45666
Q ss_pred ceeeccCCCCCCce
Q 004217 294 GLAEEVPLITPPFL 307 (767)
Q Consensus 294 ~L~sg~~~~slpil 307 (767)
.++++..+..+.+|
T Consensus 326 ~l~s~s~D~~i~iW 339 (340)
T 1got_B 326 AVATGSWDSFLKIW 339 (340)
T ss_dssp CEEEEETTSCEEEE
T ss_pred EEEEEcCCccEEec
Confidence 77777555444433
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.93 E-value=4.4e-24 Score=229.77 Aligned_cols=245 Identities=12% Similarity=0.126 Sum_probs=192.1
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCC------e
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG------S 140 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg------~ 140 (767)
...+++++.++..|++++.|++|++||..+. .+..|...|.+++|+|+|++|++|+.|+.+++|++... .
T Consensus 66 ~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~ 145 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAA 145 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGG
T ss_pred eEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccc
Confidence 4677888899999999999999999998776 35578889999999999999999999999999998643 3
Q ss_pred EEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcC--CCCEEEEEECCc-EEE
Q 004217 141 CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHA--SGELLAVASGHK-LYI 216 (767)
Q Consensus 141 ~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSP--dG~~LAsgSdd~-V~V 216 (767)
....+.+|...|.+++|+| ++..|++++.|++|++||+++++++..+ .|...|.+++|+| +|++|++|+.|+ |++
T Consensus 146 ~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~ 224 (354)
T 2pbi_B 146 KKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMV 224 (354)
T ss_dssp GCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEE
T ss_pred cceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEE
Confidence 4567788999999999999 8899999999999999999999998886 4889999999987 578999999666 999
Q ss_pred EEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecC-------------CCc---
Q 004217 217 WRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSP-------------GYW--- 275 (767)
Q Consensus 217 WDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~s-------------G~~--- 275 (767)
||+++++... .+..|...|++++|+|++.+|++++. +||++.......+.... |..
T Consensus 225 wd~~~~~~~~---~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 301 (354)
T 2pbi_B 225 WDMRSGQCVQ---AFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA 301 (354)
T ss_dssp EETTTCCEEE---EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred EECCCCcEEE---EecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE
Confidence 9999987654 67789999999999999997777654 78877543322221110 000
Q ss_pred cCCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEee
Q 004217 276 RYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQH 322 (767)
Q Consensus 276 ~~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~ 322 (767)
......+.+|+...+...... .....++...+|+||+..++...
T Consensus 302 g~~d~~i~vwd~~~~~~~~~l---~~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 302 GYNDYTINVWDVLKGSRVSIL---FGHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp EETTSCEEEEETTTCSEEEEE---CCCSSCEEEEEECTTSSCEEEEE
T ss_pred EECCCcEEEEECCCCceEEEE---ECCCCcEEEEEECCCCCEEEEEc
Confidence 011234666665444322222 23455677899999999988733
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.93 E-value=8.5e-25 Score=236.94 Aligned_cols=248 Identities=13% Similarity=0.158 Sum_probs=190.9
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCe------
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS------ 140 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~------ 140 (767)
....++++.++..|++++.|++|++||..++ .+..|...|.+++|+|+|++|++|+.|+.|+|||+.+..
T Consensus 68 ~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~ 147 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNM 147 (380)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSS
T ss_pred EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCc
Confidence 4677888899999999999999999999876 467899999999999999999999999999999987532
Q ss_pred -EEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee------cCCCCeEEEEEcC-CCCEEEEEECC
Q 004217 141 -CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR------DFYRPIASIAFHA-SGELLAVASGH 212 (767)
Q Consensus 141 -~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l------~h~~~VtsVafSP-dG~~LAsgSdd 212 (767)
....+.+|.+.|.++.|+|.++..|++|+.|++|++||+.+++++..+ .|...|.+++|++ ++++|++|+.|
T Consensus 148 ~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D 227 (380)
T 3iz6_a 148 PVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD 227 (380)
T ss_dssp TTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT
T ss_pred cceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC
Confidence 345678999999999999966778999999999999999999988765 3778899999987 78999999976
Q ss_pred c-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCc-----------
Q 004217 213 K-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYW----------- 275 (767)
Q Consensus 213 ~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~----------- 275 (767)
+ |++||++.... ....+.+|...|++++|+|++++|++++. +||++.+.....+.......
T Consensus 228 ~~v~~wd~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (380)
T 3iz6_a 228 TTVRLWDLRITSR--AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVA 305 (380)
T ss_dssp SCEEEEETTTTCC--CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEE
T ss_pred CeEEEEECCCCCc--ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEE
Confidence 6 99999985432 23467889999999999999998777654 88888655443332211110
Q ss_pred ----------cCCCCeEEEecCCCCCCCceeec-cCCCCCCceeeEEecCCCEEEE
Q 004217 276 ----------RYPPPVICMAGAHSSSHPGLAEE-VPLITPPFLRPSFVRDDERISL 320 (767)
Q Consensus 276 ----------~~p~~~v~l~~~~Ssd~~~L~sg-~~~~slpil~psFSpDg~rIva 320 (767)
......+.+|+...+........ ......++...+|+||+..++.
T Consensus 306 ~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 361 (380)
T 3iz6_a 306 FSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCT 361 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEE
T ss_pred ECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEE
Confidence 01123455555433322211111 1234456678899999999887
No 25
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.2e-23 Score=223.60 Aligned_cols=186 Identities=19% Similarity=0.226 Sum_probs=148.0
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC------C-CC-CCCCeEEEEECCCCCeEEEEeCCCeEEEEECCC-----
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP------L-SP-PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT----- 138 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~------L-~g-H~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~t----- 138 (767)
...+++..+ .|++++.|++|++|++..+. + .+ |...|.+++|+|++++|++|+.|++|+|||++.
T Consensus 17 v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~ 94 (330)
T 2hes_X 17 IWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRT 94 (330)
T ss_dssp EEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------
T ss_pred eeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCcc
Confidence 344555444 99999999999999998642 2 34 999999999999999999999999999999853
Q ss_pred --CeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCC----eEEEee-cCCCCeEEEEEcCCCCEEEEEEC
Q 004217 139 --GSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA----ECIGSR-DFYRPIASIAFHASGELLAVASG 211 (767)
Q Consensus 139 --g~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg----~~i~~l-~h~~~VtsVafSPdG~~LAsgSd 211 (767)
.+.+..+.+|...|.+++|+| ++++|++|+.|++|++||++.. +++..+ .|...|.+++|+|++++|++++.
T Consensus 95 ~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 173 (330)
T 2hes_X 95 FEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY 173 (330)
T ss_dssp CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred ccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 456788999999999999999 8999999999999999999532 455554 48899999999999999999997
Q ss_pred Cc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccC--CCeEEEEEe-----eCCcCC
Q 004217 212 HK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPH--AAPLLLTAE-----VNDLDS 261 (767)
Q Consensus 212 d~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPD--G~~LlaSgs-----vwdl~s 261 (767)
|+ |++||..+.... ....+.+|...|.+++|+|+ +.+|++++. +|++..
T Consensus 174 D~~i~iW~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 174 DDTVRIWKDYDDDWE-CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp TSCEEEEEEETTEEE-EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCeEEEEECCCCCee-EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 66 999998766321 12367789999999999999 555555543 677653
No 26
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=1.1e-23 Score=243.26 Aligned_cols=151 Identities=20% Similarity=0.300 Sum_probs=134.6
Q ss_pred eEEEEEEcCCC-EEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEc
Q 004217 72 QIFEAGRDARR-GLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH 146 (767)
Q Consensus 72 ~~~vA~sd~g~-~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~ 146 (767)
...+++..++. .|++++.|++|++||.... .+.+|...|.+++|+|||++|++|+.|++|+|||+.+++++..+.
T Consensus 150 v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~ 229 (611)
T 1nr0_A 150 MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFE 229 (611)
T ss_dssp EEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECB
T ss_pred ceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeec
Confidence 56677777765 6999999999999998765 478999999999999999999999999999999999999988884
Q ss_pred -------cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee-------------------------------
Q 004217 147 -------GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR------------------------------- 188 (767)
Q Consensus 147 -------gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l------------------------------- 188 (767)
+|.+.|.+++|+| ++++|++++.|++|++||+.+++++..+
T Consensus 230 ~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~ 308 (611)
T 1nr0_A 230 DDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINF 308 (611)
T ss_dssp CTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEE
T ss_pred cccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEE
Confidence 7999999999999 9999999999999999999988765432
Q ss_pred -------------cCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCc
Q 004217 189 -------------DFYRPIASIAFHASGELLAVASGHK-LYIWRYNMRE 223 (767)
Q Consensus 189 -------------~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~ 223 (767)
.|...|.+++|+|+|++|++++.|+ |++||+.++.
T Consensus 309 ~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 309 VNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI 357 (611)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred EeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Confidence 4778899999999999999999666 9999998654
No 27
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.93 E-value=1.1e-23 Score=227.03 Aligned_cols=190 Identities=19% Similarity=0.222 Sum_probs=162.1
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
..+.++..++..|++++.|+.|++||+.++ .+.+|...|++++|+|++++|++|+.|++|++||+.+++.+..+.+
T Consensus 100 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 179 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG 179 (420)
T ss_dssp EEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC
T ss_pred eEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC
Confidence 334456778999999999999999999876 3579999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec----CCCCeE---------------------EEEEcCC
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD----FYRPIA---------------------SIAFHAS 202 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~----h~~~Vt---------------------sVafSPd 202 (767)
|...|.+++|+| ++++|++++.|++|++||+++++.+..+. +...+. +++|+|+
T Consensus 180 h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 258 (420)
T 3vl1_A 180 HRATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTY 258 (420)
T ss_dssp CSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCT
T ss_pred CCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCC
Confidence 999999999999 89999999999999999999999888864 334444 4555789
Q ss_pred CCEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCC-eEEEEEe-----eCCcCCCCc
Q 004217 203 GELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAA-PLLLTAE-----VNDLDSSES 264 (767)
Q Consensus 203 G~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~-~LlaSgs-----vwdl~s~~~ 264 (767)
|++|++++.++ |++||+++++... .....|...|++++|+|+++ +|++++. +||++....
T Consensus 259 ~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 259 GKYVIAGHVSGVITVHNVFSKEQTI--QLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp TEEEEEEETTSCEEEEETTTCCEEE--EECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred CCEEEEEcCCCeEEEEECCCCceeE--EcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 99999999766 9999999887644 23345788999999999999 5555543 888887654
No 28
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.93 E-value=7.7e-24 Score=224.01 Aligned_cols=185 Identities=18% Similarity=0.203 Sum_probs=159.9
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEc
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH 146 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~ 146 (767)
....+++..++..|++++.|++|++||+.++ .+.+|...|.+++|+|++++|++|+.|++|+|||++ ++++..+.
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~ 145 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLL 145 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEe
Confidence 3666778889999999999999999999887 467999999999999999999999999999999986 56788899
Q ss_pred cCCCCcEEEEEccC-----CCcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEECCc-EEEEEc
Q 004217 147 GHRRTPWVVRFHPL-----NPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGHK-LYIWRY 219 (767)
Q Consensus 147 gH~~~V~sLafsP~-----dg~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl 219 (767)
+|...|.+++|+|. ++..+++++.|++|++||+++.+....+ .|...|.+++|+|+|++|++++.|+ |++||+
T Consensus 146 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~ 225 (319)
T 3frx_A 146 GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNL 225 (319)
T ss_dssp CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 99999999999983 2348999999999999999999887775 5899999999999999999999766 999999
Q ss_pred CCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe----eCCcC
Q 004217 220 NMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE----VNDLD 260 (767)
Q Consensus 220 ~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs----vwdl~ 260 (767)
++.+.+. .+ .+...|.+++|+|++.+++++.. +|+++
T Consensus 226 ~~~~~~~---~~-~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~ 266 (319)
T 3frx_A 226 AAKKAMY---TL-SAQDEVFSLAFSPNRYWLAAATATGIKVFSLD 266 (319)
T ss_dssp TTTEEEE---EE-ECCSCEEEEEECSSSSEEEEEETTEEEEEEET
T ss_pred CCCcEEE---Ee-cCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeC
Confidence 9887644 33 35578999999999997766543 55544
No 29
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.93 E-value=4.1e-23 Score=221.16 Aligned_cols=246 Identities=12% Similarity=0.071 Sum_probs=187.5
Q ss_pred ceEEEEEEcCC-CEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECC-CCCeEEEEeCCCeEEEEECCCCeEE
Q 004217 71 SQIFEAGRDAR-RGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCL 142 (767)
Q Consensus 71 s~~~vA~sd~g-~~LaSgs~DgsIrlWd~~t~~------L~gH~~sVtsVaFSp-DG~~LASgs~DGtVrVWDl~tg~~l 142 (767)
....+++..++ ..|++++.|+.|++||..+.+ +.+|...|.+++|+| ++++|++++.|+.|++||+.+ +.+
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~ 153 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVI 153 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEE
T ss_pred CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-Cce
Confidence 36677788887 899999999999999998762 347999999999999 789999999999999999986 556
Q ss_pred EEEccC---CCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe-ecCCCCeEEEEEcCCCC-EEEEEECCc-EEE
Q 004217 143 KVLHGH---RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-RDFYRPIASIAFHASGE-LLAVASGHK-LYI 216 (767)
Q Consensus 143 ~~L~gH---~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~-l~h~~~VtsVafSPdG~-~LAsgSdd~-V~V 216 (767)
..+..| ...|.+++|+| ++++|++++.|+.|++||++ ++.+.. ..|...|.+++|+|+++ +|++++.++ |++
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 231 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKL 231 (383)
T ss_dssp EEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred EEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEE
Confidence 666544 47899999999 89999999999999999995 555555 45899999999999999 899999766 999
Q ss_pred EEcCCCccccCCeEEecCCCCeEEEEEcc-CCCeEEEEEe-----eCCcCCCCcceeEeecCCCc---------------
Q 004217 217 WRYNMREETSSPRIVLRTRRSLRAVHFHP-HAAPLLLTAE-----VNDLDSSESSLTLATSPGYW--------------- 275 (767)
Q Consensus 217 WDl~t~~~~~~~~~l~~h~~~VtsVaFSP-DG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~--------------- 275 (767)
||+++.+.........+|...|++++|+| ++++|++++. +||++.++....+.......
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 311 (383)
T 3ei3_B 232 WDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMY 311 (383)
T ss_dssp EEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSS
T ss_pred EeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCC
Confidence 99998543222333457999999999999 9998887764 88988777655544322100
Q ss_pred -----c---------CCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEE
Q 004217 276 -----R---------YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (767)
Q Consensus 276 -----~---------~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva 320 (767)
. .....+.+|+..++.......+.. ....+...+|+||+..|+.
T Consensus 312 ~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~-~~~~~~~~~~s~~g~~l~s 369 (383)
T 3ei3_B 312 DLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPN-AAGIISLNKFSPTGDVLAS 369 (383)
T ss_dssp SEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTT-BCSCCCEEEECTTSSEEEE
T ss_pred CceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCC-CCceEEEEEEecCccEEEE
Confidence 0 023457777766555433333211 1122225699999998886
No 30
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.92 E-value=2.2e-23 Score=226.93 Aligned_cols=193 Identities=21% Similarity=0.245 Sum_probs=163.5
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
...++++.++..|++++.|+.|++||+.++ .+.+|...|.+++|+|++++|++++.|++|++||++++++...+.
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~- 204 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS- 204 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-
Confidence 557788889999999999999999999876 367999999999999999999999999999999999999888776
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee--------cCCCCeEEEEEcCCCCEEEEEECCc-EEEEE
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--------DFYRPIASIAFHASGELLAVASGHK-LYIWR 218 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l--------~h~~~VtsVafSPdG~~LAsgSdd~-V~VWD 218 (767)
+...+.+++|+|.++++|++|+.|++|++||+++++.+..+ .|...|.+++|+|+|++|++++.|+ |++||
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 56779999999978899999999999999999999887664 4788999999999999999999666 99999
Q ss_pred cCCCcccc---------CCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcc
Q 004217 219 YNMREETS---------SPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESS 265 (767)
Q Consensus 219 l~t~~~~~---------~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~ 265 (767)
+++..... ....+.+|...|.+++|+|++.+|++++. +||+..+...
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 285 LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 345 (393)
T ss_dssp C---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEE
Confidence 98653211 12356689999999999999998877664 7887765543
No 31
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.92 E-value=1.2e-23 Score=226.23 Aligned_cols=180 Identities=16% Similarity=0.219 Sum_probs=161.5
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECC--CCCeEEEEeCCCeEEEEECCCCeEEEEE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTGSCLKVL 145 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~----L~gH~~sVtsVaFSp--DG~~LASgs~DGtVrVWDl~tg~~l~~L 145 (767)
...+++..++..|++++.|++|++||+.+++ +.+|...|.+++|+| ++++|++|+.|++|++||+++++++..+
T Consensus 157 v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~ 236 (354)
T 2pbi_B 157 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF 236 (354)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 4566777888999999999999999998873 679999999999988 5789999999999999999999999999
Q ss_pred ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecC---CCCeEEEEEcCCCCEEEEEECCc-EEEEEcCC
Q 004217 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF---YRPIASIAFHASGELLAVASGHK-LYIWRYNM 221 (767)
Q Consensus 146 ~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h---~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t 221 (767)
.+|...|.+++|+| ++++|++++.|++|++||+++++.+..+.. ...+.+++|+|+|++|++|+.++ |++||+.+
T Consensus 237 ~~h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 315 (354)
T 2pbi_B 237 ETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK 315 (354)
T ss_dssp CCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCC
Confidence 99999999999999 899999999999999999999888776643 34789999999999999999765 99999988
Q ss_pred CccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 222 ~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
++.+. .+.+|...|++++|+|||++|++++.
T Consensus 316 ~~~~~---~l~~h~~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 316 GSRVS---ILFGHENRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp CSEEE---EECCCSSCEEEEEECTTSSCEEEEET
T ss_pred CceEE---EEECCCCcEEEEEECCCCCEEEEEcC
Confidence 87654 67789999999999999998877664
No 32
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=4.8e-23 Score=216.78 Aligned_cols=244 Identities=13% Similarity=0.097 Sum_probs=187.4
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCeEEEEeCCCeEEEEECCCCe--
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS-- 140 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~------~L~gH~~sVtsVaFSpD--G~~LASgs~DGtVrVWDl~tg~-- 140 (767)
....++++.++..|++++.|+.|++|++... .+.+|...|++++|+++ +++|++++.|+.|+|||+.+++
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 92 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS 92 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEE
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCcee
Confidence 3667788889999999999999999999732 47799999999999987 9999999999999999999987
Q ss_pred EEEEEccCCCCcEEEEEccCC--CcEEEEEeCCCeEEEEECCCCeEE---EeecCCCCeEEEEEcC-------------C
Q 004217 141 CLKVLHGHRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTAECI---GSRDFYRPIASIAFHA-------------S 202 (767)
Q Consensus 141 ~l~~L~gH~~~V~sLafsP~d--g~lLaSgS~DGtVrIWDl~tg~~i---~~l~h~~~VtsVafSP-------------d 202 (767)
.+..+.+|...|.+++|+| + +++|++++.|+.|++||++++... ....|...|.+++|+| +
T Consensus 93 ~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T 3jrp_A 93 QIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKE 171 (379)
T ss_dssp EEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CT
T ss_pred EeeeecCCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCC
Confidence 7788889999999999999 7 899999999999999999987432 3346889999999999 6
Q ss_pred CCEEEEEECCc-EEEEEcCCCcccc-CCeEEecCCCCeEEEEEccC---CCeEEEEEe-----eCCcCCCCcceeEeecC
Q 004217 203 GELLAVASGHK-LYIWRYNMREETS-SPRIVLRTRRSLRAVHFHPH---AAPLLLTAE-----VNDLDSSESSLTLATSP 272 (767)
Q Consensus 203 G~~LAsgSdd~-V~VWDl~t~~~~~-~~~~l~~h~~~VtsVaFSPD---G~~LlaSgs-----vwdl~s~~~~~~l~t~s 272 (767)
+.+|++++.++ |++||+++..... ....+..|...|.+++|+|+ +++|++++. +|+++..........
T Consensus 172 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-- 249 (379)
T 3jrp_A 172 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTL-- 249 (379)
T ss_dssp TCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEE--
T ss_pred CCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeee--
Confidence 99999999666 9999998765432 12356679999999999999 776666553 555543221111100
Q ss_pred CCccCCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCC
Q 004217 273 GYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSG 352 (767)
Q Consensus 273 G~~~~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~ 352 (767)
........+++.++|+||++.+++... ...+.+|+....
T Consensus 250 ------------------------~~~~~~~~~v~~~~~s~~g~~l~~~~~-----------------dg~i~iw~~~~~ 288 (379)
T 3jrp_A 250 ------------------------LKEEKFPDVLWRASWSLSGNVLALSGG-----------------DNKVTLWKENLE 288 (379)
T ss_dssp ------------------------SSSSCCSSCEEEEEECSSSCCEEEEES-----------------SSSEEEEEEEET
T ss_pred ------------------------eccccCCCcEEEEEEcCCCCEEEEecC-----------------CCcEEEEeCCCC
Confidence 000112335667899999999887322 234677777654
Q ss_pred ceeeee
Q 004217 353 QYELVL 358 (767)
Q Consensus 353 q~~~~~ 358 (767)
.....+
T Consensus 289 ~~~~~~ 294 (379)
T 3jrp_A 289 GKWEPA 294 (379)
T ss_dssp TEEEEE
T ss_pred Cccccc
Confidence 444433
No 33
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.92 E-value=1.3e-22 Score=210.00 Aligned_cols=180 Identities=19% Similarity=0.208 Sum_probs=164.0
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEE
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV 144 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~ 144 (767)
....+++..++..|++++.|+.|++||....+ +..|...|.+++|+|++++|++++.|+.|++||+++++.+..
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~ 178 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ 178 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeee
Confidence 36678888899999999999999999998753 568999999999999999999999999999999999999999
Q ss_pred EccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCc
Q 004217 145 LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMRE 223 (767)
Q Consensus 145 L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~ 223 (767)
+.+|...|.+++|+| ++++|++++.|+.|++||+++++.+..+.+...+.+++|+|++++|++++.++ |++||+++.+
T Consensus 179 ~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 179 FQGHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD 257 (337)
T ss_dssp ECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC
T ss_pred eecccCceEEEEECC-CCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC
Confidence 999999999999999 89999999999999999999999999999999999999999999999999655 9999999876
Q ss_pred cccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 224 ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 224 ~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
.. ....|...|.+++|+|+++++++++.
T Consensus 258 ~~----~~~~~~~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 258 KY----QLHLHESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp EE----EECCCSSCEEEEEECTTSSEEEEEET
T ss_pred eE----EEcCCccceeEEEECCCCCEEEEecC
Confidence 42 46789999999999999998776654
No 34
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=2.7e-22 Score=225.85 Aligned_cols=184 Identities=11% Similarity=0.091 Sum_probs=160.1
Q ss_pred eEEEEEEc--CCCEEEEEeCCCeEEEEeCCCC------------CCCCCCCCeEEEEECCCCCeEEEEeCC----CeEEE
Q 004217 72 QIFEAGRD--ARRGLASWVEAESLHHLRPKYC------------PLSPPPRSTIAAAFSPDGKTLASTHGD----HTVKI 133 (767)
Q Consensus 72 ~~~vA~sd--~g~~LaSgs~DgsIrlWd~~t~------------~L~gH~~sVtsVaFSpDG~~LASgs~D----GtVrV 133 (767)
...++++. ++..|++++.|+.|++||..++ .+..|...|.+++|+|++++|++++.| +.|++
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~ 146 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS 146 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEE
Confidence 67788888 9999999999999999999633 356899999999999999999999988 68888
Q ss_pred EECCCCeEEEEEccCCCCcEEEEEccCCCc-EEEEEeCCCeEEEEECCCCeEEEeec-CCC---CeEEEEEcCC-CCEEE
Q 004217 134 IDCQTGSCLKVLHGHRRTPWVVRFHPLNPT-IIASGSLDHEVRLWNASTAECIGSRD-FYR---PIASIAFHAS-GELLA 207 (767)
Q Consensus 134 WDl~tg~~l~~L~gH~~~V~sLafsP~dg~-lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~---~VtsVafSPd-G~~LA 207 (767)
|| +++.+..+.+|...|.+++|+| +++ ++++++.|+.|++||+.+++.+..+. |.. .|.+++|+|+ +++|+
T Consensus 147 ~d--~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 223 (615)
T 1pgu_A 147 WD--SGNSLGEVSGHSQRINACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVI 223 (615)
T ss_dssp TT--TCCEEEECCSCSSCEEEEEECS-SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEE
T ss_pred EE--CCCcceeeecCCccEEEEEECC-CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEE
Confidence 88 6778899999999999999999 555 89999999999999999999988875 777 8999999999 99999
Q ss_pred EEECCc-EEEEEcCCCccccCCeEE-e---cCCCCeEEEEEccCCCeEEEEEe-----eCCcCCC
Q 004217 208 VASGHK-LYIWRYNMREETSSPRIV-L---RTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSS 262 (767)
Q Consensus 208 sgSdd~-V~VWDl~t~~~~~~~~~l-~---~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~ 262 (767)
+++.++ |++||+++++... .+ . .|...|.+++|+ +++++++++. +|++...
T Consensus 224 ~~~~dg~i~vwd~~~~~~~~---~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 224 TVGSDRKISCFDGKSGEFLK---YIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTS 284 (615)
T ss_dssp EEETTCCEEEEETTTCCEEE---ECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTT
T ss_pred EEeCCCeEEEEECCCCCEeE---EecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCC
Confidence 999665 9999999887654 44 4 899999999999 9997777664 5666543
No 35
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.92 E-value=4.6e-24 Score=225.40 Aligned_cols=183 Identities=15% Similarity=0.119 Sum_probs=150.7
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECC--CCCeEEEEeCCCeEEEEECCCC--eE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTG--SC 141 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~------~L~gH~~sVtsVaFSp--DG~~LASgs~DGtVrVWDl~tg--~~ 141 (767)
...++++.++..|++++.|++|++||+..+ .+.+|...|.+++|++ ++++|++|+.|++|+|||++++ +.
T Consensus 16 V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~ 95 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEK 95 (316)
T ss_dssp EEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCE
T ss_pred EEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceE
Confidence 556778889999999999999999998764 3679999999999986 4899999999999999999987 46
Q ss_pred EEEEccCCCCcEEEEEccCC-CcEEEEEeCCCeEEEEECCCCeEE---Ee-ecCCCCeEEEEEcCC--------------
Q 004217 142 LKVLHGHRRTPWVVRFHPLN-PTIIASGSLDHEVRLWNASTAECI---GS-RDFYRPIASIAFHAS-------------- 202 (767)
Q Consensus 142 l~~L~gH~~~V~sLafsP~d-g~lLaSgS~DGtVrIWDl~tg~~i---~~-l~h~~~VtsVafSPd-------------- 202 (767)
+..+.+|...|.+++|+|++ +.+|++|+.|++|++||++++... .. ..|...|.+++|+|+
T Consensus 96 ~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~ 175 (316)
T 3bg1_A 96 SHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQK 175 (316)
T ss_dssp EEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCC
T ss_pred EEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccC
Confidence 67888999999999999932 789999999999999999876422 22 247788999999998
Q ss_pred ---CCEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCC----CeEEEEE
Q 004217 203 ---GELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHA----APLLLTA 254 (767)
Q Consensus 203 ---G~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG----~~LlaSg 254 (767)
+++|++|+.|+ |++||++..........+.+|...|++++|+|++ ++|++++
T Consensus 176 ~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 176 PNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp CCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred ccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 46899998666 9999997653211123567899999999999997 5455544
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.92 E-value=5.3e-23 Score=231.48 Aligned_cols=213 Identities=27% Similarity=0.370 Sum_probs=174.6
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC---CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~---~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
....+++..++..|++++.|+.|++|+.... .+.+|...|.+++|+||+++|++++.|+.|+|||. +++.+..+.+
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~ 424 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG 424 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEEC
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecC
Confidence 3667788899999999999999999997654 46789999999999999999999999999999995 5778899999
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCcccc
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETS 226 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~ 226 (767)
|...|++++|+| ++++|++++.|++|++||...........|...|.+++|+|++++|++++.++ |++||.. ++...
T Consensus 425 ~~~~v~~~~~s~-d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~~ 502 (577)
T 2ymu_A 425 HSSSVWGVAFSP-DDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQ 502 (577)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEEE
T ss_pred CCCCeEEEEECC-CCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCEEE
Confidence 999999999999 89999999999999999975443333456899999999999999999999776 9999954 44333
Q ss_pred CCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCceeeccCC
Q 004217 227 SPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPL 301 (767)
Q Consensus 227 ~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg~~~ 301 (767)
.+.+|...|++++|+|||++|++++. +||.. + ..+.+..+
T Consensus 503 ---~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~---~~~~~~~~---------------------------- 547 (577)
T 2ymu_A 503 ---TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G---QLLQTLTG---------------------------- 547 (577)
T ss_dssp ---EEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-S---CEEEEEEC----------------------------
T ss_pred ---EEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-C---CEEEEEcC----------------------------
Confidence 67889999999999999998877664 44421 1 11111122
Q ss_pred CCCCceeeEEecCCCEEEEe
Q 004217 302 ITPPFLRPSFVRDDERISLQ 321 (767)
Q Consensus 302 ~slpil~psFSpDg~rIva~ 321 (767)
...+++.++|+|||++|+..
T Consensus 548 h~~~v~~~~fs~dg~~l~s~ 567 (577)
T 2ymu_A 548 HSSSVWGVAFSPDGQTIASA 567 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEE
Confidence 33466678999999998863
No 37
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.92 E-value=1.5e-23 Score=226.11 Aligned_cols=240 Identities=10% Similarity=0.090 Sum_probs=175.6
Q ss_pred cceEEEEEEcCCCEEEEEeC------CCeEEEEeCCCCC--------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEE
Q 004217 70 FSQIFEAGRDARRGLASWVE------AESLHHLRPKYCP--------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIID 135 (767)
Q Consensus 70 ~s~~~vA~sd~g~~LaSgs~------DgsIrlWd~~t~~--------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWD 135 (767)
....+++++.+|..|++++. |+.|++|+..++. ..+|...|.+++|+|+++ +++++.||+|+|||
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd 121 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWE 121 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC-
T ss_pred CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEee
Confidence 34677889999999999997 7789999987652 236889999999999986 45678899999999
Q ss_pred CCCCeEE----EEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCC-EEEEE
Q 004217 136 CQTGSCL----KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGE-LLAVA 209 (767)
Q Consensus 136 l~tg~~l----~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~-~LAsg 209 (767)
+.+++.. ....+|...|.+++|+| ++++|++|+.|++|++||+++++++..+. |...|++++|+|++. +++++
T Consensus 122 ~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~ 200 (357)
T 4g56_B 122 ILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSC 200 (357)
T ss_dssp -------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEE
T ss_pred ccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeee
Confidence 9987654 23458999999999999 99999999999999999999999988875 889999999999985 77788
Q ss_pred ECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe------eCCcCCCCcceeEeecCCCccCCCCeE
Q 004217 210 SGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLDSSESSLTLATSPGYWRYPPPVI 282 (767)
Q Consensus 210 Sdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs------vwdl~s~~~~~~l~t~sG~~~~p~~~v 282 (767)
+.++ |++||+++++... ......|...+.+++|+|++..+++++. +||++..+....+ .+
T Consensus 201 ~~dg~v~~wd~~~~~~~~-~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~---~~--------- 267 (357)
T 4g56_B 201 GEDGRILLWDTRKPKPAT-RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTS---AV--------- 267 (357)
T ss_dssp ETTSCEEECCTTSSSCBC-BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEE---CC---------
T ss_pred ccCCceEEEECCCCceee-eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEE---ec---------
Confidence 7655 9999999887644 2233456788999999999776666554 4554433221111 11
Q ss_pred EEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeeec
Q 004217 283 CMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVLS 359 (767)
Q Consensus 283 ~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~~ 359 (767)
...++...+|+||++++++. .+....+.+||..+++....+.
T Consensus 268 -------------------~~~~v~~l~~sp~~~~~las----------------gs~D~~i~iwd~~~~~~~~~~~ 309 (357)
T 4g56_B 268 -------------------HSQNITGLAYSYHSSPFLAS----------------ISEDCTVAVLDADFSEVFRDLS 309 (357)
T ss_dssp -------------------CSSCEEEEEECSSSSCCEEE----------------EETTSCEEEECTTSCEEEEECC
T ss_pred -------------------cceeEEEEEEcCCCCCEEEE----------------EeCCCEEEEEECCCCcEeEECC
Confidence 22345568899998765441 1122357889988887666553
No 38
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5e-23 Score=215.36 Aligned_cols=193 Identities=10% Similarity=0.071 Sum_probs=164.3
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
...++++.++..|++++.|+.|++||..++ .+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.
T Consensus 35 v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~- 113 (369)
T 3zwl_B 35 LTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK- 113 (369)
T ss_dssp EEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-
Confidence 566778889999999999999999999876 477899999999999999999999999999999999999998887
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCC-----CeEEEEECCCCeEE------------EeecCCC--CeEEEEEcCCCCEEEE
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLD-----HEVRLWNASTAECI------------GSRDFYR--PIASIAFHASGELLAV 208 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~D-----GtVrIWDl~tg~~i------------~~l~h~~--~VtsVafSPdG~~LAs 208 (767)
|...|.+++|+| +++++++++.+ +.|++||+.+.... ....+.. .+.+++|+|++++|++
T Consensus 114 ~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (369)
T 3zwl_B 114 SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIA 192 (369)
T ss_dssp CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEE
T ss_pred cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEE
Confidence 889999999999 89999999999 99999999865421 1122444 8999999999999999
Q ss_pred EECCc-EEEEEcCC-CccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEe
Q 004217 209 ASGHK-LYIWRYNM-REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLA 269 (767)
Q Consensus 209 gSdd~-V~VWDl~t-~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~ 269 (767)
++.++ |++||+++ .+.. ..+..|...|.+++|+|++++|++++. +||++.......+.
T Consensus 193 ~~~dg~i~i~d~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 193 GHKDGKISKYDVSNNYEYV---DSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EETTSEEEEEETTTTTEEE---EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EcCCCEEEEEECCCCcEeE---EEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 99766 99999998 4433 367779999999999999998877654 88888765544443
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.92 E-value=2.5e-24 Score=229.20 Aligned_cols=189 Identities=15% Similarity=0.172 Sum_probs=149.5
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCe---EE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS---CL 142 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~------~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~---~l 142 (767)
...++++.++..|++++.|+.|++|+..++ .+.+|...|.+++|+|++++|++++.|++|+|||+.+++ ..
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~ 93 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQT 93 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCE
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeee
Confidence 344667788999999999999999999865 477999999999999999999999999999999999877 67
Q ss_pred EEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeE---EEee-c-CCCCeEEEEEcCCCCEEEEEECCc-EEE
Q 004217 143 KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC---IGSR-D-FYRPIASIAFHASGELLAVASGHK-LYI 216 (767)
Q Consensus 143 ~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~---i~~l-~-h~~~VtsVafSPdG~~LAsgSdd~-V~V 216 (767)
..+.+|...|.+++|+| ++++|++++.|++|++||+++++. ...+ . |...|.+++|+|++++|++++.++ |++
T Consensus 94 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~i 172 (377)
T 3dwl_C 94 LVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYV 172 (377)
T ss_dssp EECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEE
T ss_pred eEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEE
Confidence 77889999999999999 899999999999999999998873 4444 3 889999999999999999999766 999
Q ss_pred EEcCCCccc---------------cCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCC
Q 004217 217 WRYNMREET---------------SSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSS 262 (767)
Q Consensus 217 WDl~t~~~~---------------~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~ 262 (767)
||++..+.. .....+ .|...|++++|+|++++|++++. +||+...
T Consensus 173 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 173 LSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp EEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred EEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 999643210 001122 88999999999999998887765 5555543
No 40
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=6.7e-22 Score=222.63 Aligned_cols=236 Identities=10% Similarity=0.062 Sum_probs=184.6
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----C----CCCCCCC-eEEEEECC--CCCeEEEEeCCCeEEEEECCCC-
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC----P----LSPPPRS-TIAAAFSP--DGKTLASTHGDHTVKIIDCQTG- 139 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~----L~gH~~s-VtsVaFSp--DG~~LASgs~DGtVrVWDl~tg- 139 (767)
...++++.+++.|++++ ++.|++|+..++ + +.+|... |.+++|+| |+++|++++.|++|+|||+.++
T Consensus 21 v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~ 99 (615)
T 1pgu_A 21 TTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDK 99 (615)
T ss_dssp CCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEG
T ss_pred eeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCc
Confidence 45577888999999988 889999999865 3 6789999 99999999 9999999999999999999755
Q ss_pred -------eEEEEEccCCCCcEEEEEccCCCcEEEEEeCC----CeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCC-EE
Q 004217 140 -------SCLKVLHGHRRTPWVVRFHPLNPTIIASGSLD----HEVRLWNASTAECIGSR-DFYRPIASIAFHASGE-LL 206 (767)
Q Consensus 140 -------~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~D----GtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~-~L 206 (767)
+.+..+.+|...|.+++|+| ++++|++++.| +.|++|| .++.+..+ .|...|.+++|+|+++ +|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l 176 (615)
T 1pgu_A 100 ESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRS 176 (615)
T ss_dssp GGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEE
T ss_pred ccccccccccchhhcccccEEEEEEeC-CCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEE
Confidence 67788899999999999999 89999999988 6888888 45555554 5889999999999998 78
Q ss_pred EEEECCc-EEEEEcCCCccccCCeEEecCCC---CeEEEEEccC-CCeEEEEEe-----eCCcCCCCcceeEeecCCCcc
Q 004217 207 AVASGHK-LYIWRYNMREETSSPRIVLRTRR---SLRAVHFHPH-AAPLLLTAE-----VNDLDSSESSLTLATSPGYWR 276 (767)
Q Consensus 207 AsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~---~VtsVaFSPD-G~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~ 276 (767)
++++.++ |++||+.+.+... .+..|.. .|++++|+|+ ++++++++. +||+..++....+. .
T Consensus 177 ~~~~~d~~v~vwd~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~---- 247 (615)
T 1pgu_A 177 MTVGDDGSVVFYQGPPFKFSA---SDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIE--D---- 247 (615)
T ss_dssp EEEETTTEEEEEETTTBEEEE---EECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECC--B----
T ss_pred EEEeCCCcEEEEeCCCcceee---eecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEec--c----
Confidence 8888666 9999998887654 6777888 9999999999 997777654 55554322211110 0
Q ss_pred CCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceee
Q 004217 277 YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYEL 356 (767)
Q Consensus 277 ~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~ 356 (767)
.......++....|+ |+..++... ....+.+||..+++...
T Consensus 248 ---------------------~~~~~~~~v~~~~~~-~~~~l~~~~-----------------~d~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 248 ---------------------DQEPVQGGIFALSWL-DSQKFATVG-----------------ADATIRVWDVTTSKCVQ 288 (615)
T ss_dssp ---------------------TTBCCCSCEEEEEES-SSSEEEEEE-----------------TTSEEEEEETTTTEEEE
T ss_pred ---------------------cccccCCceEEEEEc-CCCEEEEEc-----------------CCCcEEEEECCCCcEEE
Confidence 000223355678888 888888622 23458889998887776
Q ss_pred eec
Q 004217 357 VLS 359 (767)
Q Consensus 357 ~~~ 359 (767)
.+.
T Consensus 289 ~~~ 291 (615)
T 1pgu_A 289 KWT 291 (615)
T ss_dssp EEE
T ss_pred EEc
Confidence 663
No 41
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.92 E-value=3.2e-23 Score=213.26 Aligned_cols=267 Identities=14% Similarity=0.085 Sum_probs=190.7
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC--------CCCCCCCCeEEEEECC--CCCeEEEEeCCCeEEEEECCCC-
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC--------PLSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTG- 139 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~--------~L~gH~~sVtsVaFSp--DG~~LASgs~DGtVrVWDl~tg- 139 (767)
....++++.++..|++++.|+.|++||+... .+.+|...|.+++|+| |+++|++++.|+.|+|||++++
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQ 92 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTS
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCc
Confidence 3667888889999999999999999999864 2458999999999999 6999999999999999999887
Q ss_pred --------eEEEEEccCCCCcEEEEEccCC--CcEEEEEeCCCeEEEEECCCCeEEEee--------------cCCCCeE
Q 004217 140 --------SCLKVLHGHRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTAECIGSR--------------DFYRPIA 195 (767)
Q Consensus 140 --------~~l~~L~gH~~~V~sLafsP~d--g~lLaSgS~DGtVrIWDl~tg~~i~~l--------------~h~~~Vt 195 (767)
+.+..+.+|...|.+++|+| + +++|++++.|+.|++||+++++.+..+ .+...+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (351)
T 3f3f_A 93 EECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDF 171 (351)
T ss_dssp CTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCE
T ss_pred ccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCccccee
Confidence 66888999999999999999 7 899999999999999999987654331 4677899
Q ss_pred EEEEcCC---CCEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCC----CeEEEEEe-----eCCcCCC
Q 004217 196 SIAFHAS---GELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHA----APLLLTAE-----VNDLDSS 262 (767)
Q Consensus 196 sVafSPd---G~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG----~~LlaSgs-----vwdl~s~ 262 (767)
+++|+|+ +.+|++++.++ +.+|+....+. .....+.+|...|++++|+|++ ++|++++. +||++..
T Consensus 172 ~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 172 CLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL-HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEECCCSSSCCEEEEEETTEEEEEEECTTSCE-EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred EEEeccCCCCCcEEEEecCCCcEEEEccCCCce-eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 9999997 88999999877 65665555443 2134566799999999999998 55555554 7777644
Q ss_pred CcceeEeecCCCccCCCC------------------eEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecC
Q 004217 263 ESSLTLATSPGYWRYPPP------------------VICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTE 324 (767)
Q Consensus 263 ~~~~~l~t~sG~~~~p~~------------------~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~ 324 (767)
.................. ...++. ...............++...+|+||++.|+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~--- 324 (351)
T 3f3f_A 251 LSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQS---NLQVELLSEHDDHNGEVWSVSWNLTGTILSSA--- 324 (351)
T ss_dssp C---------------------------------------CC---SEEEEEEEEECTTSSCEEEEEECSSSCCEEEE---
T ss_pred cCccccCCcccceeccCCCcccccccccccccccceeeeecc---cccccEEEEEecccccEEEEEEcCCCCEEEEe---
Confidence 322211111000000000 000000 00001112222344567789999999988862
Q ss_pred CCCCCcccccccccCCceeeeeccCCCCceeeeec
Q 004217 325 HDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVLS 359 (767)
Q Consensus 325 ~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~~ 359 (767)
+....+.+|+..+++...++.
T Consensus 325 --------------~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 325 --------------GDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp --------------ETTSCEEEEEECTTSCEEEEE
T ss_pred --------------cCCCcEEEEecCcCcchhhee
Confidence 233468899998887776664
No 42
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.92 E-value=2e-22 Score=209.80 Aligned_cols=261 Identities=15% Similarity=0.152 Sum_probs=194.8
Q ss_pred eEEEEEEcC-CCEEEEEeCCCeEEEEeCCCC---------CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeE
Q 004217 72 QIFEAGRDA-RRGLASWVEAESLHHLRPKYC---------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC 141 (767)
Q Consensus 72 ~~~vA~sd~-g~~LaSgs~DgsIrlWd~~t~---------~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~ 141 (767)
+..+++..+ +..|++++.|++|++||+... .+.+|...|.+++|+||+++|++++.|+.|++|+......
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~ 120 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTT 120 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccce
Confidence 556777754 789999999999999998753 3678999999999999999999999999999999999998
Q ss_pred EEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe--ecCCCCeEEEEEcCCC--CEEEEEECCc-EEE
Q 004217 142 LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--RDFYRPIASIAFHASG--ELLAVASGHK-LYI 216 (767)
Q Consensus 142 l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~--l~h~~~VtsVafSPdG--~~LAsgSdd~-V~V 216 (767)
......+...+..+.+++ ++++|++++.|+.+++||+........ ..|...+..++|++++ .++++++.++ |++
T Consensus 121 ~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i 199 (340)
T 4aow_A 121 TRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 199 (340)
T ss_dssp EEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEE
T ss_pred eeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEE
Confidence 888888999999999999 889999999999999999987665544 3478899999999876 4778888665 999
Q ss_pred EEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCcc--C----------CC
Q 004217 217 WRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR--Y----------PP 279 (767)
Q Consensus 217 WDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~--~----------p~ 279 (767)
||+++.+... .+.+|...|++++|+|++++|++++. +||++.......+........ + ..
T Consensus 200 ~d~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d 276 (340)
T 4aow_A 200 WNLANCKLKT---NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATG 276 (340)
T ss_dssp EETTTTEEEE---EECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEET
T ss_pred EECCCCceee---EecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCC
Confidence 9999887655 67889999999999999997777654 788876554433332111000 0 11
Q ss_pred CeEEEecCCCCCCCce------eeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCc
Q 004217 280 PVICMAGAHSSSHPGL------AEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQ 353 (767)
Q Consensus 280 ~~v~l~~~~Ssd~~~L------~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q 353 (767)
..+.+|+......... ..........+...+|+||+++|+... ....+.+||..+|.
T Consensus 277 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs-----------------~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 277 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY-----------------TDNLVRVWQVTIGT 339 (340)
T ss_dssp TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE-----------------TTSCEEEEEEEC--
T ss_pred CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe-----------------CCCEEEEEeCCCcC
Confidence 3344555332211111 111122344566899999999988722 22357788877653
No 43
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.92 E-value=7.2e-23 Score=239.03 Aligned_cols=233 Identities=15% Similarity=0.123 Sum_probs=186.9
Q ss_pred eEEEEEEc-CCCEEEEEeCCCeEEEEeCCCC---------CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeE
Q 004217 72 QIFEAGRD-ARRGLASWVEAESLHHLRPKYC---------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC 141 (767)
Q Consensus 72 ~~~vA~sd-~g~~LaSgs~DgsIrlWd~~t~---------~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~ 141 (767)
+.++++.. ++..|++++.|++|++|++... .+.+|...|.+++|+|++++|++|+.|++|+|||+.+++.
T Consensus 385 V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~ 464 (694)
T 3dm0_A 385 VTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVS 464 (694)
T ss_dssp EEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred eEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 55566653 4689999999999999998753 3668999999999999999999999999999999999999
Q ss_pred EEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee----cCCCCeEEEEEcCCC--CEEEEEECCc-E
Q 004217 142 LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR----DFYRPIASIAFHASG--ELLAVASGHK-L 214 (767)
Q Consensus 142 l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l----~h~~~VtsVafSPdG--~~LAsgSdd~-V 214 (767)
+..+.+|...|.+++|+| ++++|++++.|++|++||+......... .|...|.+++|+|++ .+|++++.|+ |
T Consensus 465 ~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v 543 (694)
T 3dm0_A 465 TRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTV 543 (694)
T ss_dssp EEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCE
T ss_pred eeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeE
Confidence 999999999999999999 8999999999999999998765544332 477889999999987 5889998666 9
Q ss_pred EEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCccCCCCeEEEecCCC
Q 004217 215 YIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHS 289 (767)
Q Consensus 215 ~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~S 289 (767)
++||+++.+... .+.+|...|++++|+|++++|++++. +||+..+.. +....
T Consensus 544 ~vwd~~~~~~~~---~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~---~~~~~----------------- 600 (694)
T 3dm0_A 544 KVWNLSNCKLRS---TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK---LYSLE----------------- 600 (694)
T ss_dssp EEEETTTCCEEE---EECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEE---EECCB-----------------
T ss_pred EEEECCCCcEEE---EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCce---EEEec-----------------
Confidence 999999887544 67889999999999999997777664 555553221 11000
Q ss_pred CCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeee
Q 004217 290 SSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVL 358 (767)
Q Consensus 290 sd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~ 358 (767)
....+...+|+||+..+.... ...+.+||..+++....+
T Consensus 601 ------------~~~~v~~~~~sp~~~~l~~~~------------------~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 601 ------------ANSVIHALCFSPNRYWLCAAT------------------EHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp ------------CSSCEEEEEECSSSSEEEEEE------------------TTEEEEEETTTTEEEEEE
T ss_pred ------------CCCcEEEEEEcCCCcEEEEEc------------------CCCEEEEECCCCCChhhh
Confidence 012344688999998887621 123788999888776666
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.92 E-value=4.2e-22 Score=206.14 Aligned_cols=232 Identities=13% Similarity=0.100 Sum_probs=187.4
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC----C-----CCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCe--
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP----L-----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS-- 140 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~----L-----~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~-- 140 (767)
...+++..++..|++++ |+.|++|+..... + .+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 54 v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 132 (337)
T 1gxr_A 54 VCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR 132 (337)
T ss_dssp CCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--E
T ss_pred eEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcc
Confidence 55677888999999998 9999999997652 1 2789999999999999999999999999999999887
Q ss_pred EEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEECCc-EEEEE
Q 004217 141 CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWR 218 (767)
Q Consensus 141 ~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~-V~VWD 218 (767)
....+.+|...|.+++|+| +++++++++.|+.|++||+++++.+..+. |...|.+++|+|++++|++++.++ |++||
T Consensus 133 ~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d 211 (337)
T 1gxr_A 133 IKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD 211 (337)
T ss_dssp EEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEE
Confidence 6677889999999999999 89999999999999999999999888865 788999999999999999999665 99999
Q ss_pred cCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCC
Q 004217 219 YNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHP 293 (767)
Q Consensus 219 l~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~ 293 (767)
+++++... ...+...+.+++|+|+++++++++. +|++...+. .
T Consensus 212 ~~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~----------------------------~ 259 (337)
T 1gxr_A 212 LREGRQLQ----QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK----------------------------Y 259 (337)
T ss_dssp TTTTEEEE----EEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE----------------------------E
T ss_pred CCCCceEe----eecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe----------------------------E
Confidence 99887544 3457889999999999998877654 344332110 0
Q ss_pred ceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeee
Q 004217 294 GLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVL 358 (767)
Q Consensus 294 ~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~ 358 (767)
.......++..+.|+||++.+++.. ....+.+||..+++.....
T Consensus 260 ----~~~~~~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~~~~~~~~~~~~~~ 303 (337)
T 1gxr_A 260 ----QLHLHESCVLSLKFAYCGKWFVSTG-----------------KDNLLNAWRTPYGASIFQS 303 (337)
T ss_dssp ----EECCCSSCEEEEEECTTSSEEEEEE-----------------TTSEEEEEETTTCCEEEEE
T ss_pred ----EEcCCccceeEEEECCCCCEEEEec-----------------CCCcEEEEECCCCeEEEEe
Confidence 0011233566789999999988732 2345788888887766444
No 45
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.5e-23 Score=219.96 Aligned_cols=183 Identities=21% Similarity=0.269 Sum_probs=147.1
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC-----------CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCC-
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC-----------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT- 138 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~-----------~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~t- 138 (767)
....++++.++..|++++.|++|++|+.... .+.+|...|.+++|+|++++|++|+.|++|+|||+..
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~ 139 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES 139 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTT
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCC
Confidence 3667888889999999999999999998421 3679999999999999999999999999999999943
Q ss_pred ---CeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCC--eEEEee-cCCCCeEEEEEcCC--CCEEEEEE
Q 004217 139 ---GSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA--ECIGSR-DFYRPIASIAFHAS--GELLAVAS 210 (767)
Q Consensus 139 ---g~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg--~~i~~l-~h~~~VtsVafSPd--G~~LAsgS 210 (767)
.+++..+.+|...|.+++|+| ++++|++++.|++|++||+.++ +++..+ .|...|.+++|+|+ +.+|++++
T Consensus 140 ~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s 218 (330)
T 2hes_X 140 GEEYECISVLQEHSQDVKHVIWHP-SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS 218 (330)
T ss_dssp CCCCEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE
T ss_pred CCCeEEEEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe
Confidence 356788999999999999999 8999999999999999999876 556665 48899999999999 67899999
Q ss_pred CCc-EEEEEcCCCccc-----cCCeEEec-CCCCeEEEEEccCCCeEEEEEe
Q 004217 211 GHK-LYIWRYNMREET-----SSPRIVLR-TRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 211 dd~-V~VWDl~t~~~~-----~~~~~l~~-h~~~VtsVaFSPDG~~LlaSgs 255 (767)
.|+ |++||++..... .....+.. |...|++++|++++ +|++++.
T Consensus 219 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~ 269 (330)
T 2hes_X 219 DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGA 269 (330)
T ss_dssp TTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEET
T ss_pred CCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeC
Confidence 766 999999764211 11112233 88999999999776 4666554
No 46
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.91 E-value=1.7e-22 Score=219.21 Aligned_cols=259 Identities=11% Similarity=0.083 Sum_probs=185.3
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC---------------CCCCCC------------CCeEEEEECCCC--Ce
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC---------------PLSPPP------------RSTIAAAFSPDG--KT 121 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~---------------~L~gH~------------~sVtsVaFSpDG--~~ 121 (767)
...+++++.++..|++++.|+.|++|+..+. .+.+|. ..|.+++|+|++ .+
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~ 109 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQ 109 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcce
Confidence 3667888899999999999999999998754 355898 889999999998 79
Q ss_pred EEEEeCCCeEEEEECCCCeEE---------------------------------------EE-EccCCCCcEEEEEccCC
Q 004217 122 LASTHGDHTVKIIDCQTGSCL---------------------------------------KV-LHGHRRTPWVVRFHPLN 161 (767)
Q Consensus 122 LASgs~DGtVrVWDl~tg~~l---------------------------------------~~-L~gH~~~V~sLafsP~d 161 (767)
|++++.|++|++||+.+++.. .. +.+|...|.+++|+| +
T Consensus 110 l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~ 188 (447)
T 3dw8_B 110 FLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS-D 188 (447)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT-T
T ss_pred EEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC-C
Confidence 999999999999999764432 12 368999999999999 8
Q ss_pred CcEEEEEeCCCeEEEEECCC-CeEEEee--------cCCCCeEEEEEcCCC-CEEEEEECCc-EEEEEcCCCcccc-CCe
Q 004217 162 PTIIASGSLDHEVRLWNAST-AECIGSR--------DFYRPIASIAFHASG-ELLAVASGHK-LYIWRYNMREETS-SPR 229 (767)
Q Consensus 162 g~lLaSgS~DGtVrIWDl~t-g~~i~~l--------~h~~~VtsVafSPdG-~~LAsgSdd~-V~VWDl~t~~~~~-~~~ 229 (767)
+++|++| .|++|++||+++ ++.+..+ .|...|.+++|+|++ ++|++++.++ |++||+++++... ...
T Consensus 189 ~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 267 (447)
T 3dw8_B 189 YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSK 267 (447)
T ss_dssp SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCE
T ss_pred CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceee
Confidence 9999998 799999999994 4455432 588899999999999 8999999766 9999999887421 123
Q ss_pred EEecCCC------------CeEEEEEccCCCeEEEEEe----eCCcCC-CCcceeEeecCCCccCCCCeEEEecCCCCCC
Q 004217 230 IVLRTRR------------SLRAVHFHPHAAPLLLTAE----VNDLDS-SESSLTLATSPGYWRYPPPVICMAGAHSSSH 292 (767)
Q Consensus 230 ~l~~h~~------------~VtsVaFSPDG~~LlaSgs----vwdl~s-~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~ 292 (767)
.+..|.. .|.+++|+|+|++|++++. +||++. ......+. +|...... ++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~---~~~~~~~~-l~--------- 334 (447)
T 3dw8_B 268 LFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQ---VHEYLRSK-LC--------- 334 (447)
T ss_dssp EECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEE---SCGGGTTT-HH---------
T ss_pred EeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceee---cccccccc-cc---------
Confidence 5666665 8999999999998777654 666653 22222111 11100000 00
Q ss_pred CceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeeeccCCCC
Q 004217 293 PGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVLSPIASN 364 (767)
Q Consensus 293 ~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~~p~~p~ 364 (767)
.+.. ...-...+.++|+||+.+|+.. +....+.+||..+++........+|.
T Consensus 335 -~~~~--~~~i~~~~~~~~s~~~~~l~s~-----------------s~dg~v~iwd~~~~~~~~~~~~~~~~ 386 (447)
T 3dw8_B 335 -SLYE--NDCIFDKFECCWNGSDSVVMTG-----------------SYNNFFRMFDRNTKRDITLEASRENN 386 (447)
T ss_dssp -HHHH--TSGGGCCCCEEECTTSSEEEEE-----------------CSTTEEEEEETTTCCEEEEECCSTTC
T ss_pred -cccc--ccccccceEEEECCCCCEEEEe-----------------ccCCEEEEEEcCCCcceeeeeccccc
Confidence 0000 0000012248999999999762 23456899999988776444344433
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1e-22 Score=218.35 Aligned_cols=198 Identities=12% Similarity=0.147 Sum_probs=166.6
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCC----C----CCCCCCCCeEEEEECCC-CCeEEEEeCCCeEEEEECCCCe-
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKY----C----PLSPPPRSTIAAAFSPD-GKTLASTHGDHTVKIIDCQTGS- 140 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t----~----~L~gH~~sVtsVaFSpD-G~~LASgs~DGtVrVWDl~tg~- 140 (767)
....++++.++..|++++.|+.|++|+... . .+.+|...|.+++|+|+ +++|++++.|+.|++||+.+++
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 148 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTE 148 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSS
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcc
Confidence 467788889999999999999999999987 2 47789999999999998 8999999999999999999876
Q ss_pred -----EEE---EEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecC-------CCCeEEEEEcCCC-C
Q 004217 141 -----CLK---VLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-------YRPIASIAFHASG-E 204 (767)
Q Consensus 141 -----~l~---~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h-------~~~VtsVafSPdG-~ 204 (767)
... .+.+|...|.+++|+|+++.+|++++.|+.|++||+++++.+..+.. ...|.+++|+|++ .
T Consensus 149 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 228 (416)
T 2pm9_A 149 SPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNST 228 (416)
T ss_dssp CTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTT
T ss_pred ccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCC
Confidence 332 34679999999999994489999999999999999999998888653 6889999999998 5
Q ss_pred EEEEEECC----cEEEEEcCCCccccCCeEEe-cCCCCeEEEEEcc-CCCeEEEEEe-----eCCcCCCCcceeEee
Q 004217 205 LLAVASGH----KLYIWRYNMREETSSPRIVL-RTRRSLRAVHFHP-HAAPLLLTAE-----VNDLDSSESSLTLAT 270 (767)
Q Consensus 205 ~LAsgSdd----~V~VWDl~t~~~~~~~~~l~-~h~~~VtsVaFSP-DG~~LlaSgs-----vwdl~s~~~~~~l~t 270 (767)
+|++++.+ .|++||+++.... ...+. +|...|++++|+| ++++|++++. +||++..+....+..
T Consensus 229 ~l~~~~~d~~~~~i~~~d~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 229 RVATATGSDNDPSILIWDLRNANTP--LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp EEEEEECCSSSCCCCEEETTSTTSC--SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC
T ss_pred EEEEEECCCCCceEEEEeCCCCCCC--cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC
Confidence 88888865 7999999986432 23455 7999999999999 8887777664 888887665555443
No 48
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.91 E-value=2.2e-22 Score=214.28 Aligned_cols=227 Identities=15% Similarity=0.137 Sum_probs=169.0
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEc
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH 146 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~ 146 (767)
....+++..++..+++++.|++|++||+.++ .+.+|...|.+++|+|++++|++++.|++|++||+... ....+.
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~ 156 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSA 156 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECC
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeee
Confidence 3666778889999999999999999999886 36799999999999999999999999999999999844 333333
Q ss_pred ---cCCCCcEEEEEccCCC----------cEEEEEeCCCeEEEEECCCCeEEEe-ecCCCCeEEEEEcCCCCEEEEEECC
Q 004217 147 ---GHRRTPWVVRFHPLNP----------TIIASGSLDHEVRLWNASTAECIGS-RDFYRPIASIAFHASGELLAVASGH 212 (767)
Q Consensus 147 ---gH~~~V~sLafsP~dg----------~lLaSgS~DGtVrIWDl~tg~~i~~-l~h~~~VtsVafSPdG~~LAsgSdd 212 (767)
+|...|.+++|+| +. .+|++++.|++|++||.. .+.... ..|...|.+++|+|+|++|++|+.|
T Consensus 157 ~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~d 234 (343)
T 2xzm_R 157 EKENHSDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGKYIATGGKD 234 (343)
T ss_dssp TTTSCSSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred cccCCCceeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCCEEEEEcCC
Confidence 7899999999999 54 789999999999999954 455444 4688999999999999999999966
Q ss_pred c-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe----eCCcCCCCcceeEeecCCCccCCCCeEEEecC
Q 004217 213 K-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE----VNDLDSSESSLTLATSPGYWRYPPPVICMAGA 287 (767)
Q Consensus 213 ~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs----vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~ 287 (767)
+ |++||++...... ....+...|.+++|+|++.+++++.. +|++......... .....
T Consensus 235 g~v~iwd~~~~~~~~---~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~-~~~~~------------- 297 (343)
T 2xzm_R 235 KKLLIWDILNLTYPQ---REFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVC-TIEAE------------- 297 (343)
T ss_dssp CEEEEEESSCCSSCS---EEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEE-ECCCC-------------
T ss_pred CeEEEEECCCCcccc---eeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceE-EeecC-------------
Confidence 6 9999996544322 33345667999999999986554332 5665543221100 00000
Q ss_pred CCCCCCceeeccCCCCCCceeeEEecCCCEEEEe
Q 004217 288 HSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQ 321 (767)
Q Consensus 288 ~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~ 321 (767)
..............+...+|+||+..|++.
T Consensus 298 ----~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg 327 (343)
T 2xzm_R 298 ----PITKAEGQKGKNPQCTSLAWNALGKKLFAG 327 (343)
T ss_dssp ----SGGGBTTBCCSCCCEEEEEECSSSCCEEEE
T ss_pred ----cchhhhhhcCCCCceEEEEECCCCCeEEEe
Confidence 000000111233456689999999999873
No 49
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.91 E-value=1.5e-22 Score=211.11 Aligned_cols=206 Identities=20% Similarity=0.312 Sum_probs=169.5
Q ss_pred CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCC
Q 004217 102 PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST 181 (767)
Q Consensus 102 ~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~t 181 (767)
.+.+|...|++++|+|++++|++++.|+.|+|||+.+++....+.+|...|.+++|+| ++++|++++.|+.|++||+++
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTT
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEEECCC
Confidence 4678999999999999999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred CeEEEeec-CCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe----
Q 004217 182 AECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE---- 255 (767)
Q Consensus 182 g~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs---- 255 (767)
++++..+. |...|.+++|+|++++|++++.++ |++||+++++... .+..|...|.+++|+|+++++++++.
T Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 97 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK---TLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEE---EecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 99888764 888999999999999999999666 9999999887654 67789999999999999997776654
Q ss_pred -eCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCccccc
Q 004217 256 -VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQ 334 (767)
Q Consensus 256 -vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~ 334 (767)
+||++.......+ ......++...+|+|+++.+++..
T Consensus 174 ~~wd~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~l~~~~------------ 211 (312)
T 4ery_A 174 RIWDTASGQCLKTL------------------------------IDDDNPPVSFVKFSPNGKYILAAT------------ 211 (312)
T ss_dssp EEEETTTCCEEEEE------------------------------CCSSCCCEEEEEECTTSSEEEEEE------------
T ss_pred EEEECCCCceeeEE------------------------------eccCCCceEEEEECCCCCEEEEEc------------
Confidence 5555432211110 001122445689999999988722
Q ss_pred ccccCCceeeeeccCCCCceeeee
Q 004217 335 SLRSSSSVRLLTYSTPSGQYELVL 358 (767)
Q Consensus 335 ~~~ss~~~~l~~~~~~~~q~~~~~ 358 (767)
....+.+||..+++....+
T Consensus 212 -----~d~~i~iwd~~~~~~~~~~ 230 (312)
T 4ery_A 212 -----LDNTLKLWDYSKGKCLKTY 230 (312)
T ss_dssp -----TTTEEEEEETTTTEEEEEE
T ss_pred -----CCCeEEEEECCCCcEEEEE
Confidence 2345888999887766655
No 50
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.91 E-value=1.6e-21 Score=240.59 Aligned_cols=233 Identities=20% Similarity=0.274 Sum_probs=178.5
Q ss_pred CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCC
Q 004217 103 LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA 182 (767)
Q Consensus 103 L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg 182 (767)
+.+|.+.|++++|+|||++|++|+.||+|+|||+.+++.+..+.+|...|.+++|+| +++++++++.|++|++||+.++
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~~ 689 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSS-DDSYIATCSADKKVKIWDSATG 689 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTC
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEECCCC
Confidence 568999999999999999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred eEEEee-cCCCCeEEEEEcCC--CCEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe---
Q 004217 183 ECIGSR-DFYRPIASIAFHAS--GELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE--- 255 (767)
Q Consensus 183 ~~i~~l-~h~~~VtsVafSPd--G~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs--- 255 (767)
+++..+ .|...|.+++|+|+ +.++++++.++ |++||+++++... .+.+|...|++++|+|+++++++++.
T Consensus 690 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~---~~~~h~~~v~~~~~sp~~~~l~s~s~dg~ 766 (1249)
T 3sfz_A 690 KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN---TMFGHTNSVNHCRFSPDDELLASCSADGT 766 (1249)
T ss_dssp CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE---EECCCSSCEEEEEECSSTTEEEEEESSSE
T ss_pred ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh---eecCCCCCEEEEEEecCCCEEEEEECCCe
Confidence 998886 58899999999994 55889998766 9999999987654 67789999999999999998877665
Q ss_pred --eCCcCCCCcceeEeecCCCcc----------------C-C---------CCeEEEecCCCCCCCceeeccCCCCCCce
Q 004217 256 --VNDLDSSESSLTLATSPGYWR----------------Y-P---------PPVICMAGAHSSSHPGLAEEVPLITPPFL 307 (767)
Q Consensus 256 --vwdl~s~~~~~~l~t~sG~~~----------------~-p---------~~~v~l~~~~Ssd~~~L~sg~~~~slpil 307 (767)
+||+........+........ + + ...+.+|+...+.. +..-......++.
T Consensus 767 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~v~ 844 (1249)
T 3sfz_A 767 LRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGL--LAEIHTGHHSTIQ 844 (1249)
T ss_dssp EEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCE--EEEEECSSSSCCC
T ss_pred EEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCc--eeEEcCCCCCceE
Confidence 888876554433322110000 0 0 12233344322221 1111123345566
Q ss_pred eeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeee
Q 004217 308 RPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVL 358 (767)
Q Consensus 308 ~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~ 358 (767)
...|+|++..+++.. ....+..||..+++....+
T Consensus 845 ~~~~sp~~~~l~~~~-----------------~dg~v~vwd~~~~~~~~~~ 878 (1249)
T 3sfz_A 845 YCDFSPYDHLAVIAL-----------------SQYCVELWNIDSRLKVADC 878 (1249)
T ss_dssp EEEECSSTTEEEEEC-----------------SSSCEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCEEEEEe-----------------CCCeEEEEEcCCCceeeec
Confidence 788999999888722 2235778888877665555
No 51
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.91 E-value=2.4e-22 Score=210.41 Aligned_cols=247 Identities=17% Similarity=0.148 Sum_probs=183.9
Q ss_pred eEEEEEEc----CCCEEEEEeCCCeEEEEeCCCCC----C-----CCCCCCeEEEEECCC----CCeEEEEeCCCeEEEE
Q 004217 72 QIFEAGRD----ARRGLASWVEAESLHHLRPKYCP----L-----SPPPRSTIAAAFSPD----GKTLASTHGDHTVKII 134 (767)
Q Consensus 72 ~~~vA~sd----~g~~LaSgs~DgsIrlWd~~t~~----L-----~gH~~sVtsVaFSpD----G~~LASgs~DGtVrVW 134 (767)
...+++.. +...++++..++.|++|+..+++ + ..|...|.+++|+|+ +++|++|+.|+.|+||
T Consensus 21 v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~ 100 (366)
T 3k26_A 21 LFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII 100 (366)
T ss_dssp EEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEE
T ss_pred eEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEE
Confidence 55566664 45667777777799999998652 1 237788999999998 6799999999999999
Q ss_pred ECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee----cCCCCeEEEEEcCCCCEEEEEE
Q 004217 135 DCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR----DFYRPIASIAFHASGELLAVAS 210 (767)
Q Consensus 135 Dl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l----~h~~~VtsVafSPdG~~LAsgS 210 (767)
|+.+++.+..+.+|...|.+++|+|.++++|++++.|++|++||+++++.+..+ .|...|.+++|+|++++|++++
T Consensus 101 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 101 NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG 180 (366)
T ss_dssp CTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEE
T ss_pred EchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEec
Confidence 999999999999999999999999977899999999999999999999998886 5889999999999999999999
Q ss_pred CCc-EEEEEcCCCccccC-------------------------CeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCc
Q 004217 211 GHK-LYIWRYNMREETSS-------------------------PRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDL 259 (767)
Q Consensus 211 dd~-V~VWDl~t~~~~~~-------------------------~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl 259 (767)
.++ |++||+++.+.... ......|...|.+++|+ ++++++++. +|++
T Consensus 181 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~ 258 (366)
T 3k26_A 181 MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKP 258 (366)
T ss_dssp TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEE
T ss_pred CCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeC
Confidence 665 99999997754320 01122388999999999 666666544 7887
Q ss_pred CCCCcc-----------eeEeecCCCcc-------------------CCCCeEEEecCCCCCCCc-eeeccCCC--CCCc
Q 004217 260 DSSESS-----------LTLATSPGYWR-------------------YPPPVICMAGAHSSSHPG-LAEEVPLI--TPPF 306 (767)
Q Consensus 260 ~s~~~~-----------~~l~t~sG~~~-------------------~p~~~v~l~~~~Ssd~~~-L~sg~~~~--slpi 306 (767)
...... ..+....++.. .....+.+|+...+.... ........ ..++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v 338 (366)
T 3k26_A 259 GKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAI 338 (366)
T ss_dssp SSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCE
T ss_pred CCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCce
Confidence 755430 11222211110 122456667755544322 11111222 4567
Q ss_pred eeeEEecCCCEEEE
Q 004217 307 LRPSFVRDDERISL 320 (767)
Q Consensus 307 l~psFSpDg~rIva 320 (767)
..++|+||++.++.
T Consensus 339 ~~~~~s~~~~~l~s 352 (366)
T 3k26_A 339 RQTSFSRDSSILIA 352 (366)
T ss_dssp EEEEECTTSSEEEE
T ss_pred EEEEeCCCCCeEEE
Confidence 78999999999887
No 52
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.91 E-value=2.1e-22 Score=215.38 Aligned_cols=247 Identities=17% Similarity=0.212 Sum_probs=182.9
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCC---eE
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG---SC 141 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~------~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg---~~ 141 (767)
....++++.++..|++++.|++|++|+.... .+.+|...|.+++|+|++++|++|+.|++|+|||+.++ ++
T Consensus 63 ~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~ 142 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC 142 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEE
T ss_pred cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEE
Confidence 4677888899999999999999999998764 46799999999999999999999999999999999876 45
Q ss_pred EEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEE--Eee-cCCCCeEEEEEcCCCCEEEEEECCc-EEEE
Q 004217 142 LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI--GSR-DFYRPIASIAFHASGELLAVASGHK-LYIW 217 (767)
Q Consensus 142 l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i--~~l-~h~~~VtsVafSPdG~~LAsgSdd~-V~VW 217 (767)
+..+.+|...|.+++|+| ++++|++++.|++|++||+++++.. ..+ .|...|.+++|+|+|++|++++.|+ |++|
T Consensus 143 ~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW 221 (345)
T 3fm0_A 143 VSVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221 (345)
T ss_dssp EEEECCCCSCEEEEEECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEecCcCCCeEEEEECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEe
Confidence 677889999999999999 8999999999999999999887643 333 5889999999999999999999766 9999
Q ss_pred EcCCCccccC------------CeEEec-CCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCccCCC
Q 004217 218 RYNMREETSS------------PRIVLR-TRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRYPP 279 (767)
Q Consensus 218 Dl~t~~~~~~------------~~~l~~-h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~p~ 279 (767)
|......... ...+.+ |...|++++|+|++..|++++. +|+++..... ..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~------------~~ 289 (345)
T 3fm0_A 222 RQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDP------------QQ 289 (345)
T ss_dssp EEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCT------------TS
T ss_pred ccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCc------------ce
Confidence 9754322110 112222 7889999999999998887765 4443321100 00
Q ss_pred CeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCC-EEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeee
Q 004217 280 PVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDE-RISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELV 357 (767)
Q Consensus 280 ~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~-rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~ 357 (767)
+...+. ..........+..++|+|++. .++. ++....+.+|+..+.+...-
T Consensus 290 ~~~~~~----------~~~~~~h~~~V~~v~~~p~~~~~laS-----------------~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 290 PTFSLT----------AHLHQAHSQDVNCVAWNPKEPGLLAS-----------------CSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp CCEEEE----------EEETTSSSSCEEEEEECSSSTTEEEE-----------------EETTSCEEEEEECC------
T ss_pred eeEEEE----------eeecccccCcEeEeEEeCCCceEEEE-----------------cCCCCcEEEEEecCCCCccc
Confidence 001000 001112344667899999986 5544 23344688999888775443
No 53
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=2e-22 Score=218.37 Aligned_cols=183 Identities=17% Similarity=0.209 Sum_probs=158.7
Q ss_pred ceEEEEEEc-CCCEEEEEeCCCeEEEEeCCCC-----------CCCCCCCCeEEEEECCCC-CeEEEEeCCCeEEEEECC
Q 004217 71 SQIFEAGRD-ARRGLASWVEAESLHHLRPKYC-----------PLSPPPRSTIAAAFSPDG-KTLASTHGDHTVKIIDCQ 137 (767)
Q Consensus 71 s~~~vA~sd-~g~~LaSgs~DgsIrlWd~~t~-----------~L~gH~~sVtsVaFSpDG-~~LASgs~DGtVrVWDl~ 137 (767)
....+++.. ++..|++++.|+.|++|++.++ .+.+|...|.+++|+|++ ++|++++.|++|+|||+.
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 162 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG 162 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC
Confidence 467777877 8999999999999999999875 245899999999999998 699999999999999999
Q ss_pred CCeEEEEE--ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee--cCCCC-eEEEEEcCCCCEEEEE---
Q 004217 138 TGSCLKVL--HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRP-IASIAFHASGELLAVA--- 209 (767)
Q Consensus 138 tg~~l~~L--~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l--~h~~~-VtsVafSPdG~~LAsg--- 209 (767)
+++.+..+ .+|...|.+++|+| ++++|++++.|+.|++||+++++.+..+ .|... +.+++|+|++++|++|
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~ 241 (402)
T 2aq5_A 163 TGAAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSR 241 (402)
T ss_dssp TTEEEEEECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECT
T ss_pred CCCccEEEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccC
Confidence 99999999 89999999999999 9999999999999999999999998886 45554 8999999999999999
Q ss_pred ECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 210 SGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 210 Sdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
+.++ |++||+++.+... ......|...|.+++|+|++++++++++
T Consensus 242 ~~d~~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~g~ 287 (402)
T 2aq5_A 242 MSERQVALWDTKHLEEPL-SLQELDTSSGVLLPFFDPDTNIVYLCGK 287 (402)
T ss_dssp TCCEEEEEEETTBCSSCS-EEEECCCCSSCEEEEEETTTTEEEEEET
T ss_pred CCCceEEEEcCccccCCc-eEEeccCCCceeEEEEcCCCCEEEEEEc
Confidence 4444 9999998876422 1223457788999999999998877763
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.91 E-value=1.1e-21 Score=214.80 Aligned_cols=259 Identities=13% Similarity=0.151 Sum_probs=197.9
Q ss_pred CcceEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEE
Q 004217 69 SFSQIFEAGRDARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCL 142 (767)
Q Consensus 69 s~s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l 142 (767)
+|...+++++. +..|+.+. |++|++||..+++ +.+|...|++|+|+|||++|++|+.|++|+|||+++++++
T Consensus 105 d~y~~~l~wS~-~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 105 DYYLNLVDWSS-GNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp CTTCBCEEECT-TSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred cccceeEEECC-CCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 44455566654 45677765 9999999999873 4578899999999999999999999999999999999999
Q ss_pred EEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeE-EEe-ecCCCCeEEEEEcCCCCEEEEEECCc-EEEEEc
Q 004217 143 KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC-IGS-RDFYRPIASIAFHASGELLAVASGHK-LYIWRY 219 (767)
Q Consensus 143 ~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~-i~~-l~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl 219 (767)
..+.+|...+.++.|++ .++++|+.|+.+++||...... +.. ..|...+..+.|+|+|+++++++.|+ |++||.
T Consensus 183 ~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 183 RNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 259 (420)
T ss_dssp EEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred EEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEee
Confidence 99999999999988854 8999999999999999987543 333 45889999999999999999999766 999999
Q ss_pred CCCcccc-CCeEEecCCCCeEEEEEccCCCeEEEEEe--------eCCcCCCCcceeEeecCCCc---------------
Q 004217 220 NMREETS-SPRIVLRTRRSLRAVHFHPHAAPLLLTAE--------VNDLDSSESSLTLATSPGYW--------------- 275 (767)
Q Consensus 220 ~t~~~~~-~~~~l~~h~~~VtsVaFSPDG~~LlaSgs--------vwdl~s~~~~~~l~t~sG~~--------------- 275 (767)
.+++... .......|...|.+++|+|++..+++++. +||+..+.....+.......
T Consensus 260 ~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 260 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH 339 (420)
T ss_dssp SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEE
Confidence 8776432 23456778999999999999887776542 78887665544433221110
Q ss_pred cCCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCC
Q 004217 276 RYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSG 352 (767)
Q Consensus 276 ~~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~ 352 (767)
.+....+.+|+..+........ ....+++.++|+|||.+|+.. +....+.+||....
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~---gH~~~V~~l~~spdg~~l~S~-----------------s~D~tvriWdv~~~ 396 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELK---GHTSRVLSLTMSPDGATVASA-----------------AADETLRLWRCFEL 396 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEEC---CCSSCEEEEEECTTSSCEEEE-----------------ETTTEEEEECCSCS
T ss_pred ecCCCEEEEEECCCCcEEEEEc---CCCCCEEEEEEcCCCCEEEEE-----------------ecCCeEEEEECCCC
Confidence 1123557777765544333333 356688899999999998862 22345888987553
No 55
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.90 E-value=3e-22 Score=233.83 Aligned_cols=189 Identities=21% Similarity=0.245 Sum_probs=160.9
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEE-
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVL- 145 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L- 145 (767)
....++++.++..|++++.|++|++||+.++ .+.+|...|.+++|+|++++|++|+.|++|+|||+.........
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~ 511 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISE 511 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeecc
Confidence 4667888899999999999999999999876 46799999999999999999999999999999998765433332
Q ss_pred --ccCCCCcEEEEEccCCC--cEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEECCc-EEEEEc
Q 004217 146 --HGHRRTPWVVRFHPLNP--TIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRY 219 (767)
Q Consensus 146 --~gH~~~V~sLafsP~dg--~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl 219 (767)
.+|...|.+++|+| ++ ..+++++.|++|++||++++++...+. |...|++++|+|+|++|++++.|+ |++||+
T Consensus 512 ~~~~h~~~v~~~~~~~-~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~ 590 (694)
T 3dm0_A 512 GGEGHRDWVSCVRFSP-NTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 590 (694)
T ss_dssp STTSCSSCEEEEEECS-CSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEET
T ss_pred CCCCCCCcEEEEEEeC-CCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 47889999999999 54 689999999999999999999887764 889999999999999999999766 999999
Q ss_pred CCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe----eCCcCCCCc
Q 004217 220 NMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE----VNDLDSSES 264 (767)
Q Consensus 220 ~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs----vwdl~s~~~ 264 (767)
++++.+. ...+...|.+++|+|++.+++++.. +||+.....
T Consensus 591 ~~~~~~~----~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 591 AEGKKLY----SLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSI 635 (694)
T ss_dssp TTTEEEE----CCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEE
T ss_pred CCCceEE----EecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCC
Confidence 9887644 2345678999999999986665543 788875444
No 56
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.90 E-value=7.1e-23 Score=221.84 Aligned_cols=228 Identities=18% Similarity=0.182 Sum_probs=180.9
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC-----------CCCCCCCCeEEEEECCC-CCeEEEEeCCCeEEEEECCCC
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC-----------PLSPPPRSTIAAAFSPD-GKTLASTHGDHTVKIIDCQTG 139 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~-----------~L~gH~~sVtsVaFSpD-G~~LASgs~DGtVrVWDl~tg 139 (767)
...+++..++..|++++.|+.+++|++... .+.+|.+.|.++.|+|+ +..|++|+.|++|++||+.++
T Consensus 111 v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~ 190 (380)
T 3iz6_a 111 VMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTG 190 (380)
T ss_dssp CCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTC
T ss_pred EEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCC
Confidence 445677889999999999999999998642 36799999999999996 567999999999999999999
Q ss_pred eEEEEE-----ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCC-CeEEEee-cCCCCeEEEEEcCCCCEEEEEECC
Q 004217 140 SCLKVL-----HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST-AECIGSR-DFYRPIASIAFHASGELLAVASGH 212 (767)
Q Consensus 140 ~~l~~L-----~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~t-g~~i~~l-~h~~~VtsVafSPdG~~LAsgSdd 212 (767)
+.+..+ .+|...|.+++|++.++++|++|+.|++|++||++. ++.+..+ .|...|.+++|+|+|++|++++.|
T Consensus 191 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D 270 (380)
T 3iz6_a 191 QRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDD 270 (380)
T ss_dssp CEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSS
T ss_pred cEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCC
Confidence 998887 689999999999886889999999999999999984 4566554 589999999999999999999976
Q ss_pred c-EEEEEcCCCccccCCeEEecC-------CCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeec-CCCccCC
Q 004217 213 K-LYIWRYNMREETSSPRIVLRT-------RRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATS-PGYWRYP 278 (767)
Q Consensus 213 ~-V~VWDl~t~~~~~~~~~l~~h-------~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~-sG~~~~p 278 (767)
+ |++||+++++.+. .+..+ ...|++++|+|+|+++++++. +||+...+....+... .+|.. .
T Consensus 271 ~~i~lwd~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~-~ 346 (380)
T 3iz6_a 271 GTCRLFDMRTGHQLQ---VYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEG-R 346 (380)
T ss_dssp SCEEEEETTTTEEEE---EECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCC-C
T ss_pred CeEEEEECCCCcEEE---EecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCC-c
Confidence 6 9999999887644 22222 235899999999997777654 8888766655544332 34433 1
Q ss_pred CCeEEEecCCCCCCCceeeccCCCCCCce
Q 004217 279 PPVICMAGAHSSSHPGLAEEVPLITPPFL 307 (767)
Q Consensus 279 ~~~v~l~~~~Ssd~~~L~sg~~~~slpil 307 (767)
...+.+ +++...++++..+..+.+|
T Consensus 347 v~~l~~----s~dg~~l~sgs~D~~i~iW 371 (380)
T 3iz6_a 347 ISCLGL----SSDGSALCTGSWDKNLKIW 371 (380)
T ss_dssp CCEEEE----CSSSSEEEEECTTSCEEEE
T ss_pred eEEEEE----CCCCCEEEEeeCCCCEEEE
Confidence 223332 4567778888777666666
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.90 E-value=5e-22 Score=215.76 Aligned_cols=254 Identities=15% Similarity=0.205 Sum_probs=190.0
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEEE
Q 004217 81 RRGLASWVEAESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (767)
Q Consensus 81 g~~LaSgs~DgsIrlWd~~t~~L-----~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sL 155 (767)
+..+++++.|+.|++|+..+++. ..|...|.+++|+|++++|++|+.||.|+|||+.+++.+..+.+|...|.++
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 182 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCL 182 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEE
Confidence 45678888999999999988742 2489999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCcEEEEEeCCCeEEEEECCC-CeEEEe-ecCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEEe
Q 004217 156 RFHPLNPTIIASGSLDHEVRLWNAST-AECIGS-RDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVL 232 (767)
Q Consensus 156 afsP~dg~lLaSgS~DGtVrIWDl~t-g~~i~~-l~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~ 232 (767)
+|++ +++++++.|+.|++||++. ...+.. ..|...|.+++|+|++++|++++.++ |++||+++.+... .+.
T Consensus 183 ~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~---~~~ 256 (401)
T 4aez_A 183 SWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKF---TKT 256 (401)
T ss_dssp EEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEE---EEC
T ss_pred EECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccE---Eec
Confidence 9954 7999999999999999994 444554 45899999999999999999999765 9999999877544 567
Q ss_pred cCCCCeEEEEEccCCCeEEEEEe--------eCCcCCCCcceeEeecCCCc---------------cCCCCeEEEecCCC
Q 004217 233 RTRRSLRAVHFHPHAAPLLLTAE--------VNDLDSSESSLTLATSPGYW---------------RYPPPVICMAGAHS 289 (767)
Q Consensus 233 ~h~~~VtsVaFSPDG~~LlaSgs--------vwdl~s~~~~~~l~t~sG~~---------------~~p~~~v~l~~~~S 289 (767)
.|...|.+++|+|++..++++++ +||+..+.....+....... ......+.+|+...
T Consensus 257 ~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 257 NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 89999999999999887877652 88887666544443211100 11234455555433
Q ss_pred CCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeee
Q 004217 290 SSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVL 358 (767)
Q Consensus 290 sd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~ 358 (767)
+...... .......++...+|+||+..++.. +....+.+|+..+++.....
T Consensus 337 ~~~~~~~-~~~~h~~~v~~~~~s~dg~~l~s~-----------------~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 337 SGLTKQV-DIPAHDTRVLYSALSPDGRILSTA-----------------ASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp TEEEEEE-EEECCSSCCCEEEECTTSSEEEEE-----------------CTTSEEEEEECCC-------
T ss_pred ccceeEE-EecCCCCCEEEEEECCCCCEEEEE-----------------eCCCcEEEEECCCCcccccc
Confidence 2222211 112334566678999999998872 23346889999887655443
No 58
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.90 E-value=2.8e-21 Score=205.39 Aligned_cols=265 Identities=13% Similarity=0.083 Sum_probs=197.0
Q ss_pred ceEEEEEEc-CCCEEEEEeCCCeEEEEeCCCCCC-----------------CCCCCCeEEEEECC-CCCeEEEEeCCCeE
Q 004217 71 SQIFEAGRD-ARRGLASWVEAESLHHLRPKYCPL-----------------SPPPRSTIAAAFSP-DGKTLASTHGDHTV 131 (767)
Q Consensus 71 s~~~vA~sd-~g~~LaSgs~DgsIrlWd~~t~~L-----------------~gH~~sVtsVaFSp-DG~~LASgs~DGtV 131 (767)
....+++.. ++..|++++.|+.|++||..+... .+|...|.+++|+| ++++|++++.|+.|
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i 124 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTL 124 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEE
T ss_pred cEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeE
Confidence 466788888 999999999999999999987521 25999999999999 88899999999999
Q ss_pred EEEECCCCeEEEEEccCCCCcEEEEEccC--CCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCC-EEE
Q 004217 132 KIIDCQTGSCLKVLHGHRRTPWVVRFHPL--NPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGE-LLA 207 (767)
Q Consensus 132 rVWDl~tg~~l~~L~gH~~~V~sLafsP~--dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~-~LA 207 (767)
++||+.+++.+..+. +...+.++.|+|. ++.++++++.|+.|++||+++++.+..+. |...|.+++|+|+++ +|+
T Consensus 125 ~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~ 203 (408)
T 4a11_B 125 KVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILA 203 (408)
T ss_dssp EEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEE
T ss_pred EEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEE
Confidence 999999999888876 7788999999984 23399999999999999999998887765 889999999999998 588
Q ss_pred EEECCc-EEEEEcCCCcccc-------------CCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeE
Q 004217 208 VASGHK-LYIWRYNMREETS-------------SPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTL 268 (767)
Q Consensus 208 sgSdd~-V~VWDl~t~~~~~-------------~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l 268 (767)
+++.++ |++||+++..... .......|...|.+++|+|++++|++++. +|++...+.....
T Consensus 204 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 283 (408)
T 4a11_B 204 TASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVN 283 (408)
T ss_dssp EEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCC
T ss_pred EEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceec
Confidence 888665 9999998765211 01112568899999999999998887765 8888765543222
Q ss_pred eecCCCcc-------------------CCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCC
Q 004217 269 ATSPGYWR-------------------YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGA 329 (767)
Q Consensus 269 ~t~sG~~~-------------------~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs 329 (767)
........ .....+.+|+...+....... ....++...+|+||+..++...
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~s~~------- 353 (408)
T 4a11_B 284 YGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK---GHYKTVDCCVFQSNFQELYSGS------- 353 (408)
T ss_dssp CCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC---CCSSCEEEEEEETTTTEEEEEE-------
T ss_pred cccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec---cCCCeEEEEEEcCCCCEEEEEC-------
Confidence 11000000 012346666655544333322 3445677899999999988722
Q ss_pred cccccccccCCceeeeeccCCCCceee
Q 004217 330 TRTQQSLRSSSSVRLLTYSTPSGQYEL 356 (767)
Q Consensus 330 ~~~~~~~~ss~~~~l~~~~~~~~q~~~ 356 (767)
....+.+||..+.+...
T Consensus 354 ----------~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 354 ----------RDCNILAWVPSLYEPVP 370 (408)
T ss_dssp ----------TTSCEEEEEECC-----
T ss_pred ----------CCCeEEEEeCCCCCccC
Confidence 23468889988766543
No 59
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.90 E-value=2.3e-22 Score=210.30 Aligned_cols=237 Identities=14% Similarity=0.128 Sum_probs=176.0
Q ss_pred ceEEEEEEcC---CCEEEEEeCCCeEEEEeCCCCC-----CCCCCCCeEEEE------ECCCCCeEEEEeCCCeEEEEEC
Q 004217 71 SQIFEAGRDA---RRGLASWVEAESLHHLRPKYCP-----LSPPPRSTIAAA------FSPDGKTLASTHGDHTVKIIDC 136 (767)
Q Consensus 71 s~~~vA~sd~---g~~LaSgs~DgsIrlWd~~t~~-----L~gH~~sVtsVa------FSpDG~~LASgs~DGtVrVWDl 136 (767)
....+++..+ +..|++++.|+.|++||+.+.+ +.+|...|.+++ |++++++|++++.|+.|++||+
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~ 146 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDP 146 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECT
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeC
Confidence 3566666666 6999999999999999998753 668999999995 5789999999999999999999
Q ss_pred CCCe-EEEEEccCCC----CcEEEE----EccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcC---CCC
Q 004217 137 QTGS-CLKVLHGHRR----TPWVVR----FHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHA---SGE 204 (767)
Q Consensus 137 ~tg~-~l~~L~gH~~----~V~sLa----fsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSP---dG~ 204 (767)
.+++ .+..+..|.+ .|.++. |+| +++++++++.|+.|++||+++++......+...|.+++|+| ++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 225 (357)
T 3i2n_A 147 RQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMN 225 (357)
T ss_dssp TSCSSCSEEECCCTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCC
T ss_pred CCCCCcceeccccCCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCC
Confidence 9887 6777866655 788998 678 89999999999999999999999988888999999999999 999
Q ss_pred EEEEEECCc-EEEEEcCCCccccCCe--EEecCCCCeEEEEEccCCCe-EEEEEe-----eCCcCCCCcceeEeecCCCc
Q 004217 205 LLAVASGHK-LYIWRYNMREETSSPR--IVLRTRRSLRAVHFHPHAAP-LLLTAE-----VNDLDSSESSLTLATSPGYW 275 (767)
Q Consensus 205 ~LAsgSdd~-V~VWDl~t~~~~~~~~--~l~~h~~~VtsVaFSPDG~~-LlaSgs-----vwdl~s~~~~~~l~t~sG~~ 275 (767)
+|++++.++ |++||+++.+...... ....|...|++++|+|+++. +++++. +|+++......... ..|..
T Consensus 226 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~g~~ 304 (357)
T 3i2n_A 226 KLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKD-SEGIE 304 (357)
T ss_dssp EEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CC-TTSCC
T ss_pred EEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccccc-CCCCc
Confidence 999999665 9999998876544111 22389999999999999994 444443 67776443321111 01100
Q ss_pred cCCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEE
Q 004217 276 RYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (767)
Q Consensus 276 ~~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva 320 (767)
....... ...........++...+|+||++.+++
T Consensus 305 ~~~~~~~-----------~~~~~~~~~~~~v~~~~~s~~~~~l~~ 338 (357)
T 3i2n_A 305 MGVAGSV-----------SLLQNVTLSTQPISSLDWSPDKRGLCV 338 (357)
T ss_dssp CCCCCEE-----------EEEEEEECCSSCEEEEEECSSSTTEEE
T ss_pred ccccccc-----------ceeeccccCCCCeeEEEEcCCCCeEEE
Confidence 0000000 011111223446778999999999884
No 60
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.90 E-value=1.2e-21 Score=215.11 Aligned_cols=247 Identities=18% Similarity=0.222 Sum_probs=188.1
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEEE
Q 004217 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVV 155 (767)
Q Consensus 80 ~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sL 155 (767)
++..|++++.|+.|++||..++ .+.+|.+.|.+++|++++ +|++|+.|++|++||+++++++..+.+|...|.++
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l 209 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL 209 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEE
Confidence 5679999999999999999887 477999999999999988 99999999999999999999999999999999999
Q ss_pred EEcc-CCCcEEEEEeCCCeEEEEECCCCeEE-----------------------Ee-ecCCCCeEEEEEcCCCCEEEEEE
Q 004217 156 RFHP-LNPTIIASGSLDHEVRLWNASTAECI-----------------------GS-RDFYRPIASIAFHASGELLAVAS 210 (767)
Q Consensus 156 afsP-~dg~lLaSgS~DGtVrIWDl~tg~~i-----------------------~~-l~h~~~VtsVafSPdG~~LAsgS 210 (767)
+|++ .+++++++++.|++|++||+++++.. .. ..|...+.++ ++++++|++++
T Consensus 210 ~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~ 287 (464)
T 3v7d_B 210 DIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGS 287 (464)
T ss_dssp EEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEE
T ss_pred EEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEe
Confidence 9984 26789999999999999999987632 12 3466677766 67899999999
Q ss_pred CCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCccC-------
Q 004217 211 GHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRY------- 277 (767)
Q Consensus 211 dd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~------- 277 (767)
.++ |++||+++++.+. .+.+|...|.+++|+|+++++++++. +||++.++....+ .+|...
T Consensus 288 ~d~~i~vwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~---~~h~~~v~~~~~~ 361 (464)
T 3v7d_B 288 YDNTLIVWDVAQMKCLY---ILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL---QGHTALVGLLRLS 361 (464)
T ss_dssp TTSCEEEEETTTTEEEE---EECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEEC
T ss_pred CCCeEEEEECCCCcEEE---EecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEE---eCCCCcEEEEEEc
Confidence 666 9999999887655 67789999999999999998877765 7888765544333 333211
Q ss_pred --------CCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccC
Q 004217 278 --------PPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYST 349 (767)
Q Consensus 278 --------p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~ 349 (767)
....+.+|+...... ..... ........+|++++..+++. + ...+.+||.
T Consensus 362 ~~~l~s~s~dg~v~vwd~~~~~~--~~~~~--~~~~~~~~~~~~~~~~l~~~-----------------~-dg~i~iwd~ 419 (464)
T 3v7d_B 362 DKFLVSAAADGSIRGWDANDYSR--KFSYH--HTNLSAITTFYVSDNILVSG-----------------S-ENQFNIYNL 419 (464)
T ss_dssp SSEEEEEETTSEEEEEETTTCCE--EEEEE--CTTCCCEEEEEECSSEEEEE-----------------E-TTEEEEEET
T ss_pred CCEEEEEeCCCcEEEEECCCCce--eeeec--CCCCccEEEEEeCCCEEEEe-----------------c-CCeEEEEEC
Confidence 123344455333221 11110 12233356788888877761 1 236899999
Q ss_pred CCCceeee
Q 004217 350 PSGQYELV 357 (767)
Q Consensus 350 ~~~q~~~~ 357 (767)
.+++....
T Consensus 420 ~~g~~~~~ 427 (464)
T 3v7d_B 420 RSGKLVHA 427 (464)
T ss_dssp TTCCEEES
T ss_pred CCCcEEeh
Confidence 88876654
No 61
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.90 E-value=3.9e-22 Score=215.03 Aligned_cols=232 Identities=11% Similarity=0.074 Sum_probs=174.4
Q ss_pred EEEEcCCCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCC
Q 004217 75 EAGRDARRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRR 150 (767)
Q Consensus 75 vA~sd~g~~LaSgs~DgsIrlWd~~t~~----L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~ 150 (767)
++++.++..|++++.|+.|++||..+.+ +..| ..+....|++++++|++|+.|+.|+|||+.+++....+.+|..
T Consensus 62 ~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~ 140 (420)
T 3vl1_A 62 NTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVS 140 (420)
T ss_dssp CEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSS
T ss_pred eeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccC
Confidence 5566788999999999999999998763 3344 4455567899999999999999999999999999888899999
Q ss_pred CcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCC
Q 004217 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSP 228 (767)
Q Consensus 151 ~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~ 228 (767)
.|.+++|+| ++++|++++.|++|++||+.+++.+..+. |...|.+++|+|++++|++++.++ |++||+++++...
T Consensus 141 ~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~-- 217 (420)
T 3vl1_A 141 EITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIH-- 217 (420)
T ss_dssp CEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE--
T ss_pred ccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeE--
Confidence 999999999 89999999999999999999998887764 889999999999999999999766 9999999887654
Q ss_pred eEEe---cCCCCeEEEE---------------------EccCCCeEEEEEeeCCcCCCCcceeEeecCCCccCCCCeEEE
Q 004217 229 RIVL---RTRRSLRAVH---------------------FHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICM 284 (767)
Q Consensus 229 ~~l~---~h~~~VtsVa---------------------FSPDG~~LlaSgsvwdl~s~~~~~~l~t~sG~~~~p~~~v~l 284 (767)
.+. .|...|.+++ |+|++++|++++.. ..+.+
T Consensus 218 -~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----------------------g~i~i 273 (420)
T 3vl1_A 218 -TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS-----------------------GVITV 273 (420)
T ss_dssp -EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT-----------------------SCEEE
T ss_pred -EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC-----------------------CeEEE
Confidence 333 2444555555 46777766555431 12233
Q ss_pred ecCCCCCCCceeeccCCCCCCceeeEEecCCC-EEEEeecCCCCCCcccccccccCCceeeeeccCCCCc
Q 004217 285 AGAHSSSHPGLAEEVPLITPPFLRPSFVRDDE-RISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQ 353 (767)
Q Consensus 285 ~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~-rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q 353 (767)
|+...+.. +..-......++..++|+|++. .+++. +....+.+||..+++
T Consensus 274 ~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~g-----------------~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 274 HNVFSKEQ--TIQLPSKFTCSCNSLTVDGNNANYIYAG-----------------YENGMLAQWDLRSPE 324 (420)
T ss_dssp EETTTCCE--EEEECCTTSSCEEEEEECSSCTTEEEEE-----------------ETTSEEEEEETTCTT
T ss_pred EECCCCce--eEEcccccCCCceeEEEeCCCCCEEEEE-----------------eCCCeEEEEEcCCCc
Confidence 33222111 1111112234566789999999 66652 223468889887653
No 62
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.90 E-value=6e-22 Score=211.27 Aligned_cols=256 Identities=12% Similarity=0.160 Sum_probs=189.5
Q ss_pred eEEEEEEcCCC-EEEEEeCCCeEEEEeC----CCCC--------------CC------CCCCCeEEEEECCCCCeEEEEe
Q 004217 72 QIFEAGRDARR-GLASWVEAESLHHLRP----KYCP--------------LS------PPPRSTIAAAFSPDGKTLASTH 126 (767)
Q Consensus 72 ~~~vA~sd~g~-~LaSgs~DgsIrlWd~----~t~~--------------L~------gH~~sVtsVaFSpDG~~LASgs 126 (767)
...++++.++. .|++++.|+.|++|++ .+++ +. +|...|++++|+|++++|++++
T Consensus 48 v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 127 (425)
T 1r5m_A 48 IVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGV 127 (425)
T ss_dssp CSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEE
T ss_pred eEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEe
Confidence 55677888888 9999999999999999 6543 11 2677999999999999999999
Q ss_pred CCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecC-CCC------------
Q 004217 127 GDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-YRP------------ 193 (767)
Q Consensus 127 ~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h-~~~------------ 193 (767)
.|+.|++|| .+++.+..+.+|...|.+++|+| ++++|++++.|+.|++||+.+++.+..+.. ...
T Consensus 128 ~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (425)
T 1r5m_A 128 ENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGD 205 (425)
T ss_dssp TTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------
T ss_pred CCCeEEEEe-CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCC
Confidence 999999999 67888999999999999999999 899999999999999999999998887653 333
Q ss_pred ---eEEEEEcCCCCEEEEEE-CCcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCc
Q 004217 194 ---IASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSES 264 (767)
Q Consensus 194 ---VtsVafSPdG~~LAsgS-dd~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~ 264 (767)
+.+++|+|++. +++++ ++.|++||+++.+... .+..|...|.+++|+|++++|++++. +|+++..+.
T Consensus 206 ~~~~~~~~~~~~~~-~~~~~~~g~i~~~d~~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 281 (425)
T 1r5m_A 206 GSLGVDVEWVDDDK-FVIPGPKGAIFVYQITEKTPTG---KLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS 281 (425)
T ss_dssp CCCBSCCEEEETTE-EEEECGGGCEEEEETTCSSCSE---EECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC
T ss_pred cceeeEEEEcCCCE-EEEEcCCCeEEEEEcCCCceee---eeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 89999999876 45555 5559999999886544 67789999999999999997777664 888876655
Q ss_pred ceeEeecCCCcc---C----------CCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcc
Q 004217 265 SLTLATSPGYWR---Y----------PPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATR 331 (767)
Q Consensus 265 ~~~l~t~sG~~~---~----------p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~ 331 (767)
...+....+... + ....+.+|+........... ....++...+|+||+..+++...
T Consensus 282 ~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~-------- 350 (425)
T 1r5m_A 282 QNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSI---VDGVPIFAGRISQDGQKYAVAFM-------- 350 (425)
T ss_dssp SEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEE---CTTCCEEEEEECTTSSEEEEEET--------
T ss_pred ceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecc---cCCccEEEEEEcCCCCEEEEEEC--------
Confidence 544432222110 0 12344455543332222222 23446668899999998887332
Q ss_pred cccccccCCceeeeeccCCCCc
Q 004217 332 TQQSLRSSSSVRLLTYSTPSGQ 353 (767)
Q Consensus 332 ~~~~~~ss~~~~l~~~~~~~~q 353 (767)
...+.+||..+++
T Consensus 351 ---------dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 351 ---------DGQVNVYDLKKLN 363 (425)
T ss_dssp ---------TSCEEEEECHHHH
T ss_pred ---------CCeEEEEECCCCc
Confidence 2356777776554
No 63
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.90 E-value=6.4e-22 Score=206.85 Aligned_cols=184 Identities=13% Similarity=0.151 Sum_probs=149.9
Q ss_pred eEEEEEEc--CCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCC--CCeEEEEeCCCeEEEEECCCCe-
Q 004217 72 QIFEAGRD--ARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS- 140 (767)
Q Consensus 72 ~~~vA~sd--~g~~LaSgs~DgsIrlWd~~t~~------L~gH~~sVtsVaFSpD--G~~LASgs~DGtVrVWDl~tg~- 140 (767)
...+++.. .+..|++++.|++|++||+.+++ +.+|...|.+++|+|+ +++|++++.|++|++||++++.
T Consensus 56 V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~ 135 (297)
T 2pm7_B 56 VWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT 135 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC
T ss_pred eEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc
Confidence 45566643 48899999999999999998752 4679999999999997 8999999999999999998763
Q ss_pred -EEEEEccCCCCcEEEEEccCC------------CcEEEEEeCCCeEEEEECCCCe----EEEee-cCCCCeEEEEEcCC
Q 004217 141 -CLKVLHGHRRTPWVVRFHPLN------------PTIIASGSLDHEVRLWNASTAE----CIGSR-DFYRPIASIAFHAS 202 (767)
Q Consensus 141 -~l~~L~gH~~~V~sLafsP~d------------g~lLaSgS~DGtVrIWDl~tg~----~i~~l-~h~~~VtsVafSPd 202 (767)
....+.+|...|.+++|+|.. +++|++|+.|++|++||+++++ ....+ .|...|.+++|+|+
T Consensus 136 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~ 215 (297)
T 2pm7_B 136 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT 215 (297)
T ss_dssp BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCC
T ss_pred eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCC
Confidence 245678999999999999931 4799999999999999998765 44444 48899999999999
Q ss_pred C---CEEEEEECCc-EEEEEcCCCccccCCeEE--ecCCCCeEEEEEccCCCeEEEEEe
Q 004217 203 G---ELLAVASGHK-LYIWRYNMREETSSPRIV--LRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 203 G---~~LAsgSdd~-V~VWDl~t~~~~~~~~~l--~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
+ ++|++++.|+ |+|||++..........+ ..|...|.+++|+|+|++|++++.
T Consensus 216 ~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 216 VLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (297)
T ss_dssp CSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET
T ss_pred CCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC
Confidence 5 7999999766 999999875321101122 457889999999999998887765
No 64
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=5.3e-22 Score=215.34 Aligned_cols=241 Identities=10% Similarity=0.114 Sum_probs=174.8
Q ss_pred eEEEEEEcCC--CEEEEEeCCCeEEEEeCCCCC--------------------------------------------CCC
Q 004217 72 QIFEAGRDAR--RGLASWVEAESLHHLRPKYCP--------------------------------------------LSP 105 (767)
Q Consensus 72 ~~~vA~sd~g--~~LaSgs~DgsIrlWd~~t~~--------------------------------------------L~g 105 (767)
...+++..++ ..+++++.|+.|++|++.... +.+
T Consensus 96 V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (447)
T 3dw8_B 96 INKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANA 175 (447)
T ss_dssp CCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSC
T ss_pred eEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccC
Confidence 4556666666 789999999999999987521 368
Q ss_pred CCCCeEEEEECCCCCeEEEEeCCCeEEEEECCC-CeEEEE-------EccCCCCcEEEEEccCCC-cEEEEEeCCCeEEE
Q 004217 106 PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT-GSCLKV-------LHGHRRTPWVVRFHPLNP-TIIASGSLDHEVRL 176 (767)
Q Consensus 106 H~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~t-g~~l~~-------L~gH~~~V~sLafsP~dg-~lLaSgS~DGtVrI 176 (767)
|...|.+++|+|++++|++| .|+.|+|||+++ ++.+.. +.+|...|.+++|+| ++ ++|++|+.|++|++
T Consensus 176 h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 176 HTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp CSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTSCEEE
T ss_pred CCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCCeEEE
Confidence 99999999999999999998 799999999984 444442 568999999999999 66 99999999999999
Q ss_pred EECCCCeE----EEeec-CCC------------CeEEEEEcCCCCEEEEEECCcEEEEEcCC-CccccCCeEEecCCCC-
Q 004217 177 WNASTAEC----IGSRD-FYR------------PIASIAFHASGELLAVASGHKLYIWRYNM-REETSSPRIVLRTRRS- 237 (767)
Q Consensus 177 WDl~tg~~----i~~l~-h~~------------~VtsVafSPdG~~LAsgSdd~V~VWDl~t-~~~~~~~~~l~~h~~~- 237 (767)
||+++++. +..+. +.. .|.+++|+|+|++|++++++.|++||+++ ++.+. .+..|...
T Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~---~~~~~~~~~ 330 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVE---TYQVHEYLR 330 (447)
T ss_dssp EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSC---CEESCGGGT
T ss_pred EECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccc---eeecccccc
Confidence 99999886 55554 443 89999999999999999995599999987 55433 45556421
Q ss_pred --------------eEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCcc----CCCCeEEEecCCCCCCCc
Q 004217 238 --------------LRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR----YPPPVICMAGAHSSSHPG 294 (767)
Q Consensus 238 --------------VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~----~p~~~v~l~~~~Ssd~~~ 294 (767)
+..++|+|++++|++++. +||+...+... +.....-.. .....+... .......
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 407 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCAS--GKRKKDE 407 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECS--SCCCTTC
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCcccccc--CCccccc
Confidence 334999999998866654 88888655432 221111100 011111111 1112222
Q ss_pred eeeccCCCCCCceeeEEecCCCEEEE
Q 004217 295 LAEEVPLITPPFLRPSFVRDDERISL 320 (767)
Q Consensus 295 L~sg~~~~slpil~psFSpDg~rIva 320 (767)
+.....+...+++.++|+|++..|++
T Consensus 408 ~~~~~~~~~~~i~~~~~~p~~~~la~ 433 (447)
T 3dw8_B 408 ISVDSLDFNKKILHTAWHPKENIIAV 433 (447)
T ss_dssp EEGGGCCTTSCCCEEEECSSSSEEEE
T ss_pred ccccccccCCceeEEEECCCCCEEEE
Confidence 22333344556778999999999987
No 65
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.89 E-value=9e-23 Score=217.21 Aligned_cols=183 Identities=16% Similarity=0.136 Sum_probs=150.1
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC-------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCe---
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYCP-------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS--- 140 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~-------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~--- 140 (767)
....+++..++..|++++.|+.|++||+.+++ +.+|...|.+++|+|++++|++++.|+.|++||+++++
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 136 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWW 136 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CC
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccce
Confidence 36778888899999999999999999998753 56899999999999999999999999999999999887
Q ss_pred EEEEEcc-CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECC------------------CCeEEEeecCCCCeEEEEEcC
Q 004217 141 CLKVLHG-HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS------------------TAECIGSRDFYRPIASIAFHA 201 (767)
Q Consensus 141 ~l~~L~g-H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~------------------tg~~i~~l~h~~~VtsVafSP 201 (767)
....+.+ |...|.+++|+| ++++|++++.|++|++||+. .++++..+.|...|.+++|+|
T Consensus 137 ~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 215 (377)
T 3dwl_C 137 VSKHLKRPLRSTILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSP 215 (377)
T ss_dssp CCEEECSSCCSCEEEEEECT-TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECT
T ss_pred eeeEeecccCCCeEEEEEcC-CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECC
Confidence 4677887 999999999999 89999999999999999985 345555568889999999999
Q ss_pred CCCEEEEEECCc-EEEEEcCCCcccc-CCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 202 SGELLAVASGHK-LYIWRYNMREETS-SPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 202 dG~~LAsgSdd~-V~VWDl~t~~~~~-~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
+|++|++++.++ |++||+++++... ....+..|...|.+++|+|++++|++++
T Consensus 216 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 216 SGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp TSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEES
T ss_pred CCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEc
Confidence 999999999765 9999999887511 0236778999999999999998665543
No 66
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.89 E-value=1.4e-20 Score=194.03 Aligned_cols=254 Identities=13% Similarity=0.144 Sum_probs=188.4
Q ss_pred EEEEEcCCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 74 FEAGRDARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 74 ~vA~sd~g~~LaSgs~DgsIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
+++++.++ .|+++ .|++|++||..+++ +.+|...|++++|+|++++|++|+.|++|+|||+++++++..+.+
T Consensus 30 ~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~ 107 (318)
T 4ggc_A 30 LVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS 107 (318)
T ss_dssp CEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecC
Confidence 34555443 66665 49999999999873 457889999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEE-Ee-ecCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCcc
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI-GS-RDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREE 224 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i-~~-l~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~ 224 (767)
|...+.++.+. +.++++++.++.+++|+....... .. ..|...+..+.|++++++|++++.++ |++||+++++.
T Consensus 108 h~~~~~~~~~~---~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 108 HSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp CSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred ccceEEEeecC---CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 99998877664 589999999999999999876443 33 46889999999999999999999766 99999988764
Q ss_pred cc-CCeEEecCCCCeEEEEEccCCCeEEEEEe--------eCCcCCCCcceeEeecCCC---------------ccCCCC
Q 004217 225 TS-SPRIVLRTRRSLRAVHFHPHAAPLLLTAE--------VNDLDSSESSLTLATSPGY---------------WRYPPP 280 (767)
Q Consensus 225 ~~-~~~~l~~h~~~VtsVaFSPDG~~LlaSgs--------vwdl~s~~~~~~l~t~sG~---------------~~~p~~ 280 (767)
.. .......+...|.++.++|++..++..+. +|+................ ......
T Consensus 185 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~ 264 (318)
T 4ggc_A 185 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQN 264 (318)
T ss_dssp BSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTC
T ss_pred cccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCC
Confidence 33 23345667889999999999887765432 6776654433222211110 001234
Q ss_pred eEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCC
Q 004217 281 VICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSG 352 (767)
Q Consensus 281 ~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~ 352 (767)
.+.+|+..++....... ....++..++|+||+++|+.. +....+.+||....
T Consensus 265 ~i~iwd~~~~~~~~~l~---gH~~~V~~l~~spdg~~l~S~-----------------s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 265 QLVIWKYPTMAKVAELK---GHTSRVLSLTMSPDGATVASA-----------------AADETLRLWRCFEL 316 (318)
T ss_dssp CEEEEETTTCCEEEEEC---CCSSCEEEEEECTTSSCEEEE-----------------ETTTEEEEECCSCC
T ss_pred EEEEEECCCCcEEEEEc---CCCCCEEEEEEcCCCCEEEEE-----------------ecCCeEEEEECCCC
Confidence 57777765544433333 355678889999999998862 22335778887553
No 67
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.89 E-value=5.8e-22 Score=211.62 Aligned_cols=191 Identities=11% Similarity=0.076 Sum_probs=157.6
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC----------CCCCCCCeEEEEECCC----C---CeEEEEeCCCeEEEE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP----------LSPPPRSTIAAAFSPD----G---KTLASTHGDHTVKII 134 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~----------L~gH~~sVtsVaFSpD----G---~~LASgs~DGtVrVW 134 (767)
...+++.. ..|++++.|+.|++|+....+ +.+|...|.+++|+|+ + ++|++++.|+.|++|
T Consensus 19 i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw 96 (397)
T 1sq9_A 19 IFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFY 96 (397)
T ss_dssp EEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEE
T ss_pred eEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEE
Confidence 44555544 899999999999999998764 4589999999999999 9 999999999999999
Q ss_pred ECCCCeE-----EEEEccC-----CCCcEEEEEc----cCCCcE-EEEEeCCCeEEEEECCC------CeEEE-----ee
Q 004217 135 DCQTGSC-----LKVLHGH-----RRTPWVVRFH----PLNPTI-IASGSLDHEVRLWNAST------AECIG-----SR 188 (767)
Q Consensus 135 Dl~tg~~-----l~~L~gH-----~~~V~sLafs----P~dg~l-LaSgS~DGtVrIWDl~t------g~~i~-----~l 188 (767)
|+.+++. +..+.+| ...|.+++|+ | ++++ |++++.|+.|++||+++ ++.+. .+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 175 (397)
T 1sq9_A 97 RITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL 175 (397)
T ss_dssp EEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEE
T ss_pred EccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCccccccccceeeccCccee
Confidence 9998887 8889999 5899999999 9 8888 99999999999999998 55544 43
Q ss_pred --------cCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEEec---C---CCCeEEEEEccCCCeEEEE
Q 004217 189 --------DFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVLR---T---RRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 189 --------~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~---h---~~~VtsVaFSPDG~~LlaS 253 (767)
.|...|.+++|+|++ +|++++.++ |++||+++.+.+. .+.. | ...|.+++|+|++++|+++
T Consensus 176 ~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~ 251 (397)
T 1sq9_A 176 QGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLY---NFESQHSMINNSNSIRSVKFSPQGSLLAIA 251 (397)
T ss_dssp EEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEE---EEECCC---CCCCCEEEEEECSSTTEEEEE
T ss_pred eeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeE---EEeccccccccCCccceEEECCCCCEEEEE
Confidence 268899999999999 999998666 9999999887654 5666 8 9999999999999988876
Q ss_pred Ee--------eCCcCCCCcceeEe
Q 004217 254 AE--------VNDLDSSESSLTLA 269 (767)
Q Consensus 254 gs--------vwdl~s~~~~~~l~ 269 (767)
+. +||++.......+.
T Consensus 252 ~~d~~~g~i~i~d~~~~~~~~~~~ 275 (397)
T 1sq9_A 252 HDSNSFGCITLYETEFGERIGSLS 275 (397)
T ss_dssp EEETTEEEEEEEETTTCCEEEEEC
T ss_pred ecCCCCceEEEEECCCCcccceec
Confidence 53 67777655444443
No 68
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.89 E-value=1.9e-21 Score=204.97 Aligned_cols=186 Identities=15% Similarity=0.149 Sum_probs=156.2
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEE-
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV- 144 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~- 144 (767)
...+++..++..|++++.|+.|++||..+++ +.+|...|.+++|+|++++|++++.|+.|++||+++++....
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 90 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTL 90 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeE
Confidence 4557778899999999999999999998762 568999999999999999999999999999999998875544
Q ss_pred -EccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeE---EEe--ecCCCCeEEEEEcCCCCEEEEEECCc-EEEE
Q 004217 145 -LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC---IGS--RDFYRPIASIAFHASGELLAVASGHK-LYIW 217 (767)
Q Consensus 145 -L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~---i~~--l~h~~~VtsVafSPdG~~LAsgSdd~-V~VW 217 (767)
+..|...|.+++|+| ++++|++++.|+.|++||+..++. ... ..|...|.+++|+|++++|++++.++ |++|
T Consensus 91 ~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~ 169 (372)
T 1k8k_C 91 VILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIF 169 (372)
T ss_dssp ECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEE
Confidence 467999999999999 899999999999999999998763 222 34788999999999999999999665 9999
Q ss_pred EcC------------------CCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCC
Q 004217 218 RYN------------------MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDS 261 (767)
Q Consensus 218 Dl~------------------t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s 261 (767)
|++ .++.. ..+..|...|.+++|+|++++|++++. +||++.
T Consensus 170 d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 233 (372)
T 1k8k_C 170 SAYIKEVEERPAPTPWGSKMPFGELM---FESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADK 233 (372)
T ss_dssp ECCCTTTSCCCCCBTTBSCCCTTCEE---EECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGG
T ss_pred Ecccccccccccccccccccchhhhe---EecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 975 23322 245578999999999999997777654 555553
No 69
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.89 E-value=7.6e-22 Score=211.62 Aligned_cols=231 Identities=16% Similarity=0.203 Sum_probs=173.4
Q ss_pred eCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCC----CeEEEEEccCCCCcEEEEE
Q 004217 88 VEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT----GSCLKVLHGHRRTPWVVRF 157 (767)
Q Consensus 88 s~DgsIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~t----g~~l~~L~gH~~~V~sLaf 157 (767)
+.|+.|++|+..+.. ...|...|.+++|+|++++|++++.|+.|+|||+.+ .+.+..+.+|...|.+++|
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKF 121 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEE
Confidence 899999999998652 246889999999999999999999999999999987 4578889999999999999
Q ss_pred ccCCCcEEEEEeCCCeEEEEECCCCe------EEEe----ecCCCCeEEEEEcCC-CCEEEEEECCc-EEEEEcCCCccc
Q 004217 158 HPLNPTIIASGSLDHEVRLWNASTAE------CIGS----RDFYRPIASIAFHAS-GELLAVASGHK-LYIWRYNMREET 225 (767)
Q Consensus 158 sP~dg~lLaSgS~DGtVrIWDl~tg~------~i~~----l~h~~~VtsVafSPd-G~~LAsgSdd~-V~VWDl~t~~~~ 225 (767)
+|+++++|++++.|++|++||+.+++ .... ..|...|.+++|+|+ +.+|++++.++ |++||+++++..
T Consensus 122 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 201 (416)
T 2pm9_A 122 NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEV 201 (416)
T ss_dssp CSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEE
T ss_pred cCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcc
Confidence 99448999999999999999999886 3333 357889999999999 68999988666 999999988764
Q ss_pred cCCeEEecC------CCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCC-CCceeec
Q 004217 226 SSPRIVLRT------RRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSS-HPGLAEE 298 (767)
Q Consensus 226 ~~~~~l~~h------~~~VtsVaFSPDG~~LlaSgsvwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd-~~~L~sg 298 (767)
. .+..+ ...|.+++|+|++..+++++...... ..+.+|+..... ......
T Consensus 202 ~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~-------------------~~i~~~d~~~~~~~~~~~~- 258 (416)
T 2pm9_A 202 I---HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND-------------------PSILIWDLRNANTPLQTLN- 258 (416)
T ss_dssp E---EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS-------------------CCCCEEETTSTTSCSBCCC-
T ss_pred e---EEeccccccccCCceEEEEECCCCCCEEEEEECCCCC-------------------ceEEEEeCCCCCCCcEEee-
Confidence 4 44444 78899999999986555555422100 022333322211 111111
Q ss_pred cCCCCCCceeeEEec-CCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeeec
Q 004217 299 VPLITPPFLRPSFVR-DDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVLS 359 (767)
Q Consensus 299 ~~~~slpil~psFSp-Dg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~~ 359 (767)
.....++..++|+| |+..++... ....+.+||..+++....+.
T Consensus 259 -~~~~~~v~~~~~s~~~~~~l~s~~-----------------~dg~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 259 -QGHQKGILSLDWCHQDEHLLLSSG-----------------RDNTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp -SCCSSCEEEEEECSSCSSCEEEEE-----------------SSSEEEEECSSSCCEEEEEE
T ss_pred -cCccCceeEEEeCCCCCCeEEEEe-----------------CCCCEEEeeCCCCccceeec
Confidence 02334566899999 777777622 23468899998887766663
No 70
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.89 E-value=3e-22 Score=229.41 Aligned_cols=184 Identities=9% Similarity=0.010 Sum_probs=151.6
Q ss_pred eEEEEEEcC------CCEEEEEeCCCeEEEEeCCCC---------------CCCCCCCCeEEEEECCCCCeEEEEeCCCe
Q 004217 72 QIFEAGRDA------RRGLASWVEAESLHHLRPKYC---------------PLSPPPRSTIAAAFSPDGKTLASTHGDHT 130 (767)
Q Consensus 72 ~~~vA~sd~------g~~LaSgs~DgsIrlWd~~t~---------------~L~gH~~sVtsVaFSpDG~~LASgs~DGt 130 (767)
...+++... +..|++++.|++|++||+... .+.+|...|++++|+++ ..|++|+.||+
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~Dgt 288 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGF 288 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSE
T ss_pred EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCE
Confidence 444556543 579999999999999999754 24579999999999986 48999999999
Q ss_pred EEEEECCCCe-EEEEEccCCCCcEEE--EEccCCC-cEEEEEeCCCeEEEEECCCCeEEEeec-CC--CCeEEEEEcCCC
Q 004217 131 VKIIDCQTGS-CLKVLHGHRRTPWVV--RFHPLNP-TIIASGSLDHEVRLWNASTAECIGSRD-FY--RPIASIAFHASG 203 (767)
Q Consensus 131 VrVWDl~tg~-~l~~L~gH~~~V~sL--afsP~dg-~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~--~~VtsVafSPdG 203 (767)
|++||++++. ....+.+|...|.+| .|+| ++ ++|+|++.|++|+|||++++++...+. |. ..|.+++|+|++
T Consensus 289 V~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~ 367 (524)
T 2j04_B 289 VAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQI 367 (524)
T ss_dssp EEEEETTBCSSCSEEEECSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTT
T ss_pred EEEEECCCCCCceEEeecccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCc
Confidence 9999999764 456789999999999 4667 66 899999999999999999887665542 33 358899999999
Q ss_pred CEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcC
Q 004217 204 ELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLD 260 (767)
Q Consensus 204 ~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~ 260 (767)
+.|++++++. |++||++++.... .+.+|...|++|+|+|+|++|++++. +|++.
T Consensus 368 ~~l~s~~~d~tv~lwd~~~~~~~~---~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 368 YSYIYSDGASSLRAVPSRAAFAVH---PLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp TEEEEECSSSEEEEEETTCTTCCE---EEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred CeEEEeCCCCcEEEEECcccccce---eeecCCCceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 9999988665 9999999877543 67789999999999999998777665 66654
No 71
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.89 E-value=9.9e-23 Score=222.29 Aligned_cols=235 Identities=11% Similarity=0.101 Sum_probs=157.3
Q ss_pred EEEcCCCEEEEEeCCCeEEEEeCCCC---------CCCCCCCCeEEEEECC--------CCCeEEEEeCCCeEEEEECCC
Q 004217 76 AGRDARRGLASWVEAESLHHLRPKYC---------PLSPPPRSTIAAAFSP--------DGKTLASTHGDHTVKIIDCQT 138 (767)
Q Consensus 76 A~sd~g~~LaSgs~DgsIrlWd~~t~---------~L~gH~~sVtsVaFSp--------DG~~LASgs~DGtVrVWDl~t 138 (767)
....++..|++++.|++|++||...+ .+.+|.+.|++++|+| |+++||+|+.|++|+|||+.+
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 34456678999999999999998765 3789999999999997 899999999999999999999
Q ss_pred CeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe--------------------------ecCCC
Q 004217 139 GSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--------------------------RDFYR 192 (767)
Q Consensus 139 g~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~--------------------------l~h~~ 192 (767)
+.++..+.+|...|.+++|+|.+.++|++++.|++|++||+++++.... ..|..
T Consensus 176 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 255 (393)
T 4gq1_A 176 EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIAS 255 (393)
T ss_dssp TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSS
T ss_pred CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccc
Confidence 9888888899999999999995556899999999999999998765332 13556
Q ss_pred CeEEEEEc-CCCCEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCcCCC--CcceeE
Q 004217 193 PIASIAFH-ASGELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSS--ESSLTL 268 (767)
Q Consensus 193 ~VtsVafS-PdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgsvwdl~s~--~~~~~l 268 (767)
.+.++.|+ ++|+.|++++.++ +++||+....... .+..|...+..+.+.|+.+.+............ .....+
T Consensus 256 ~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
T 4gq1_A 256 SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYN---EISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFA 332 (393)
T ss_dssp SCSEEEEETTTTCEEEEECTTSEEEEEEC----------------------CCSCSEEEECSSCCSSCCEECSSCTTEEE
T ss_pred cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCc---eEeeecCccccEEEccccccccccCcceeEEEccCCCCEEE
Confidence 78889886 8999999999666 9999998876544 455666667777776665422111110000000 000011
Q ss_pred eecCCCccCCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEe
Q 004217 269 ATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQ 321 (767)
Q Consensus 269 ~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~ 321 (767)
. ..+ ....+.+|+...+.......+ ...++..++|+|||+.|++.
T Consensus 333 ~-sgs----~Dg~V~lwd~~~~~~~~~~~~---~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 333 T-AHS----QHGLIQLINTYEKDSNSIPIQ---LGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp E-EET----TTTEEEEEETTCTTCCEEEEE---CSSCEEEEEECTTSSEEEEE
T ss_pred E-EEC----CCCEEEEEECCCCcEEEEecC---CCCcEEEEEEcCCCCEEEEE
Confidence 1 000 124577787666655444333 34477889999999999884
No 72
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.89 E-value=2.2e-21 Score=202.86 Aligned_cols=220 Identities=15% Similarity=0.184 Sum_probs=168.4
Q ss_pred ceEEEEEEcC---CCEEEEEeCCCeEEEEeCCC-C-----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeE
Q 004217 71 SQIFEAGRDA---RRGLASWVEAESLHHLRPKY-C-----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC 141 (767)
Q Consensus 71 s~~~vA~sd~---g~~LaSgs~DgsIrlWd~~t-~-----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~ 141 (767)
...+++++.+ +..|++++.|+.|++||+.+ + .+.+|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 120 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQA 120 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCc
Confidence 3666777777 69999999999999999986 2 3568999999999999999999999999999999999987
Q ss_pred EEEEccCCCCcEEEEE--ccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCC----------------------------
Q 004217 142 LKVLHGHRRTPWVVRF--HPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY---------------------------- 191 (767)
Q Consensus 142 l~~L~gH~~~V~sLaf--sP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~---------------------------- 191 (767)
+. +.+|...|.+++| +| ++++|++++.|+.|++||+++++.+..+...
T Consensus 121 ~~-~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 198 (368)
T 3mmy_A 121 IQ-IAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLE 198 (368)
T ss_dssp EE-EEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECS
T ss_pred ee-eccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEec
Confidence 66 5679999999999 88 8899999999999999999988765554422
Q ss_pred --------------CCeEEEEEcCCCCE----EEEEECCc-EEEEEcCCCccccCCeEEecCCC------------CeEE
Q 004217 192 --------------RPIASIAFHASGEL----LAVASGHK-LYIWRYNMREETSSPRIVLRTRR------------SLRA 240 (767)
Q Consensus 192 --------------~~VtsVafSPdG~~----LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~------------~Vts 240 (767)
..+.++++.++... +++++.++ |++||++..........+..|.. .|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 278 (368)
T 3mmy_A 199 NQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNG 278 (368)
T ss_dssp SSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEE
T ss_pred cccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEE
Confidence 23344555444433 88888665 99999988754233445666655 7999
Q ss_pred EEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCC
Q 004217 241 VHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDD 315 (767)
Q Consensus 241 VaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg 315 (767)
++|+|++++|++++. +||+..++. +.... ....++..++|+||+
T Consensus 279 ~~~sp~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~----------------------------~~~~~v~~~~~s~~g 327 (368)
T 3mmy_A 279 IAFHPVHGTLATVGSDGRFSFWDKDARTK---LKTSE----------------------------QLDQPISACCFNHNG 327 (368)
T ss_dssp EEECTTTCCEEEEETTSCEEEEETTTTEE---EEECC----------------------------CCSSCEEEEEECTTS
T ss_pred EEEecCCCEEEEEccCCeEEEEECCCCcE---EEEec----------------------------CCCCCceEEEECCCC
Confidence 999999998877764 455443221 11111 123456678999999
Q ss_pred CEEEEeec
Q 004217 316 ERISLQHT 323 (767)
Q Consensus 316 ~rIva~~~ 323 (767)
..|+....
T Consensus 328 ~~l~~~s~ 335 (368)
T 3mmy_A 328 NIFAYASS 335 (368)
T ss_dssp SCEEEEEC
T ss_pred CeEEEEec
Confidence 99998544
No 73
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.89 E-value=5.7e-22 Score=207.57 Aligned_cols=200 Identities=17% Similarity=0.204 Sum_probs=165.5
Q ss_pred eEEEEEEcC----CCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECC-CCCeEEEEeCCCeEEEEECCCCeEE
Q 004217 72 QIFEAGRDA----RRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCL 142 (767)
Q Consensus 72 ~~~vA~sd~----g~~LaSgs~DgsIrlWd~~t~~----L~gH~~sVtsVaFSp-DG~~LASgs~DGtVrVWDl~tg~~l 142 (767)
...+++..+ +..|++++.|+.|++||..+++ +.+|...|.+++|+| ++++|++++.|+.|++||+++++.+
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 151 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV 151 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE
Confidence 555666666 6799999999999999998763 668999999999999 9999999999999999999999999
Q ss_pred EEE---ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-----------------------------C
Q 004217 143 KVL---HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-----------------------------F 190 (767)
Q Consensus 143 ~~L---~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-----------------------------h 190 (767)
..+ .+|...|.+++|+| ++++|++++.|+.|++||+++++....+. |
T Consensus 152 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (366)
T 3k26_A 152 AIFGGVEGHRDEVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIH 230 (366)
T ss_dssp EEECSTTSCSSCEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSC
T ss_pred EEecccccccCceeEEEECC-CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCC
Confidence 888 78999999999999 89999999999999999999876543322 8
Q ss_pred CCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccc-----------cCCeEEecCCCCeEEEEEccC--CCeEEEEEe-
Q 004217 191 YRPIASIAFHASGELLAVASGHK-LYIWRYNMREET-----------SSPRIVLRTRRSLRAVHFHPH--AAPLLLTAE- 255 (767)
Q Consensus 191 ~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~-----------~~~~~l~~h~~~VtsVaFSPD--G~~LlaSgs- 255 (767)
...|.+++|+ +++|++++.++ |++||+++.... .....+..|...|++++|+|+ +++|++++.
T Consensus 231 ~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d 308 (366)
T 3k26_A 231 RNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 308 (366)
T ss_dssp SSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT
T ss_pred cceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC
Confidence 8899999998 77999998655 999999876531 112356678889999999999 997777654
Q ss_pred ----eCCcCCCCcce-eEeecCCC
Q 004217 256 ----VNDLDSSESSL-TLATSPGY 274 (767)
Q Consensus 256 ----vwdl~s~~~~~-~l~t~sG~ 274 (767)
+|++...+... ......++
T Consensus 309 g~i~vwd~~~~~~~~~~~~~~~~~ 332 (366)
T 3k26_A 309 GKLYVWDLEVEDPHKAKCTTLTHH 332 (366)
T ss_dssp SCEEEEECCSSSGGGCEEEEECCT
T ss_pred CcEEEEECCCCCCccccceEEccc
Confidence 88888766543 33444554
No 74
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.89 E-value=3.7e-21 Score=200.19 Aligned_cols=189 Identities=16% Similarity=0.156 Sum_probs=161.4
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC-----CCCCCCCCeEEEEECCCC--CeEEEEeCCCeEEEEECCCCeEEEE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC-----PLSPPPRSTIAAAFSPDG--KTLASTHGDHTVKIIDCQTGSCLKV 144 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~-----~L~gH~~sVtsVaFSpDG--~~LASgs~DGtVrVWDl~tg~~l~~ 144 (767)
.........+..+++++.|+.+++||.... .+.+|...|.+++|++++ .++++++.|+.|++||+.+++.+..
T Consensus 131 ~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~ 210 (340)
T 4aow_A 131 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 210 (340)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred eeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeE
Confidence 445556677889999999999999998764 467899999999999864 5788999999999999999999999
Q ss_pred EccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECCcEEEEEcCCCcc
Q 004217 145 LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREE 224 (767)
Q Consensus 145 L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t~~~ 224 (767)
+.+|.+.|.+++|+| ++++|++|+.|++|++||+++.+++..+.+...|.+++|+|++.+++.+.++.|++||+++...
T Consensus 211 ~~~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~ 289 (340)
T 4aow_A 211 HIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKII 289 (340)
T ss_dssp ECCCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEE
T ss_pred ecCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeE
Confidence 999999999999999 9999999999999999999999999999988999999999999988888888899999987754
Q ss_pred ccC------CeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCC
Q 004217 225 TSS------PRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDS 261 (767)
Q Consensus 225 ~~~------~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s 261 (767)
... ......|...|++++|+|||++|++++. +|++.+
T Consensus 290 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 290 VDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp EEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred EEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 321 1223468899999999999998877664 555553
No 75
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.5e-21 Score=206.40 Aligned_cols=193 Identities=12% Similarity=0.128 Sum_probs=163.9
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC---CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~---~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
....++++.++..|++++.|+.|++|+.... .+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+..
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 189 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFEL 189 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeec
Confidence 4777888899999999999999999995443 4778999999999999999999999999999999999999999988
Q ss_pred CCCC---------------cEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEEC
Q 004217 148 HRRT---------------PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG 211 (767)
Q Consensus 148 H~~~---------------V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSd 211 (767)
+... +.++.|+| + ..+++++.|+.|++||+++++.+..+ .|...|.+++|+|++++|++++.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 267 (425)
T 1r5m_A 190 KETGGSSINAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD 267 (425)
T ss_dssp C---------------CCCBSCCEEEE-T-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEET
T ss_pred cccCccceeeccccCCcceeeEEEEcC-C-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcC
Confidence 8777 99999999 4 56889999999999999998887775 48899999999999999999996
Q ss_pred Cc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEe
Q 004217 212 HK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLA 269 (767)
Q Consensus 212 d~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~ 269 (767)
++ |++||+++.+... .+..|...|.+++|+|++ .+++++. +|+++.......+.
T Consensus 268 d~~i~i~d~~~~~~~~---~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~ 327 (425)
T 1r5m_A 268 DGTLRIWHGGNGNSQN---CFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI 327 (425)
T ss_dssp TSCEEEECSSSBSCSE---EECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCCCccce---EecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc
Confidence 65 9999999876544 667799999999999999 5666554 88887655444443
No 76
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.89 E-value=1.8e-21 Score=203.11 Aligned_cols=244 Identities=9% Similarity=-0.006 Sum_probs=188.1
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC-------CCCCCCCeEEEEECCCCC-eEEEEeCCCeEEEEEC-CCCeE
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYCP-------LSPPPRSTIAAAFSPDGK-TLASTHGDHTVKIIDC-QTGSC 141 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~-------L~gH~~sVtsVaFSpDG~-~LASgs~DGtVrVWDl-~tg~~ 141 (767)
....+++..++..|++++.|+.|++|+..... +.+|...|.+++|+|+++ +|++|+.|+.|++||+ .+++.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 92 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF 92 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce
Confidence 36667788899999999999999999987653 448999999999999999 9999999999999999 87764
Q ss_pred EEEEcc--CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCC---------CeEEEeecCCCCeEEEEEcCCCCEEEEEE
Q 004217 142 LKVLHG--HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST---------AECIGSRDFYRPIASIAFHASGELLAVAS 210 (767)
Q Consensus 142 l~~L~g--H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~t---------g~~i~~l~h~~~VtsVafSPdG~~LAsgS 210 (767)
..+.+ |...|.+++|+| +++|++++.|+.|++||+++ ++++..+.+...|.+++|+|++ +++++
T Consensus 93 -~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~ 167 (342)
T 1yfq_A 93 -QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGM 167 (342)
T ss_dssp -EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEE
T ss_pred -EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEe
Confidence 77888 999999999999 78999999999999999998 7777777899999999999988 77777
Q ss_pred CC-cEEEEEcCC-CccccCCeEEecCCCCeEEEEEcc-CCCeEEEEEe-----eCCcCCC------CcceeEeecCCCcc
Q 004217 211 GH-KLYIWRYNM-REETSSPRIVLRTRRSLRAVHFHP-HAAPLLLTAE-----VNDLDSS------ESSLTLATSPGYWR 276 (767)
Q Consensus 211 dd-~V~VWDl~t-~~~~~~~~~l~~h~~~VtsVaFSP-DG~~LlaSgs-----vwdl~s~------~~~~~l~t~sG~~~ 276 (767)
.+ .|++||+++ ..... ......|...|.+++|+| +++++++++. +|+++.. .....+ .++..
T Consensus 168 ~d~~i~i~d~~~~~~~~~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~---~~~~~ 243 (342)
T 1yfq_A 168 NNSQVQWFRLPLCEDDNG-TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF---RCHRL 243 (342)
T ss_dssp STTEEEEEESSCCTTCCC-EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE---ECCCC
T ss_pred CCCeEEEEECCccccccc-eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee---ecccc
Confidence 55 599999998 54321 234556788999999999 9997777664 5555543 111111 11100
Q ss_pred CCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceee
Q 004217 277 YPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYEL 356 (767)
Q Consensus 277 ~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~ 356 (767)
.. .......++...+|+||++.+++.. ....+.+||..+++...
T Consensus 244 --------------~~-----~~~~~~~~i~~~~~s~~~~~l~~~~-----------------~dg~i~vwd~~~~~~~~ 287 (342)
T 1yfq_A 244 --------------NL-----KDTNLAYPVNSIEFSPRHKFLYTAG-----------------SDGIISCWNLQTRKKIK 287 (342)
T ss_dssp --------------CT-----TCCSSCCCEEEEEECTTTCCEEEEE-----------------TTSCEEEEETTTTEEEE
T ss_pred --------------cc-----cccccceeEEEEEEcCCCCEEEEec-----------------CCceEEEEcCccHhHhh
Confidence 00 0012234666789999999888722 23357889998887766
Q ss_pred eec
Q 004217 357 VLS 359 (767)
Q Consensus 357 ~~~ 359 (767)
.+.
T Consensus 288 ~~~ 290 (342)
T 1yfq_A 288 NFA 290 (342)
T ss_dssp ECC
T ss_pred hhh
Confidence 653
No 77
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.89 E-value=3.3e-21 Score=226.04 Aligned_cols=237 Identities=14% Similarity=0.146 Sum_probs=191.9
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEc
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH 146 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~ 146 (767)
....++++.++..|++++.|+.|++||..++ .+.+|...|.+++|+|++++|++++.|+.|+|||+.+++.+..+.
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 94 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE 94 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 3677888999999999999999999999876 466899999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCC-eEEEee-cCCCCeEEEEEcC-CCCEEEEEECCc-EEEEEcCCC
Q 004217 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA-ECIGSR-DFYRPIASIAFHA-SGELLAVASGHK-LYIWRYNMR 222 (767)
Q Consensus 147 gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg-~~i~~l-~h~~~VtsVafSP-dG~~LAsgSdd~-V~VWDl~t~ 222 (767)
+|.+.|.+++|+| ++++|++++.|++|++||+.++ .....+ .|...|.+++|+| ++++|++++.++ |++||+++.
T Consensus 95 ~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~ 173 (814)
T 3mkq_A 95 AHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (814)
T ss_dssp CCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS
T ss_pred cCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999999999999 8999999999999999999987 555554 5889999999999 888999999666 999999877
Q ss_pred ccccCCeEEec-CCCCeEEEEEcc--CCCeEEEEEe-----eCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCc
Q 004217 223 EETSSPRIVLR-TRRSLRAVHFHP--HAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPG 294 (767)
Q Consensus 223 ~~~~~~~~l~~-h~~~VtsVaFSP--DG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~ 294 (767)
.... .... +...+.+++|+| ++.++++++. +|++..... +....+
T Consensus 174 ~~~~---~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~---~~~~~~--------------------- 226 (814)
T 3mkq_A 174 TPNF---TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC---VATLEG--------------------- 226 (814)
T ss_dssp SCSE---EEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE---EEEEEC---------------------
T ss_pred ccee---EEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE---EEEEcC---------------------
Confidence 6533 3444 458999999999 8887776653 454443221 111111
Q ss_pred eeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeeec
Q 004217 295 LAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVLS 359 (767)
Q Consensus 295 L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~~ 359 (767)
...++..++|+||+..+++.. ....+.+||..+++....+.
T Consensus 227 -------~~~~v~~~~~~~~~~~l~~~~-----------------~dg~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 227 -------HMSNVSFAVFHPTLPIIISGS-----------------EDGTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp -------CSSCEEEEEECSSSSEEEEEE-----------------TTSCEEEEETTTCSEEEEEC
T ss_pred -------CCCCEEEEEEcCCCCEEEEEe-----------------CCCeEEEEECCCCcEEEEee
Confidence 123455788999999888732 22357889988887777664
No 78
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.88 E-value=9.4e-21 Score=198.07 Aligned_cols=250 Identities=14% Similarity=0.186 Sum_probs=182.4
Q ss_pred CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCC
Q 004217 102 PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST 181 (767)
Q Consensus 102 ~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~t 181 (767)
++.+|.+.|++++|+|++++|++++.|+.|+|||+.+++.+..+.+|...|.+++|+| ++++|++++.|++|++||+.+
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTT
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC
Confidence 3668999999999999999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred CeEEEeecCCCCeEEEEEcCCCCEEEEEECC-----c-EEEEEcCCCcccc--------CCeEEecCCC--CeEEEEEcc
Q 004217 182 AECIGSRDFYRPIASIAFHASGELLAVASGH-----K-LYIWRYNMREETS--------SPRIVLRTRR--SLRAVHFHP 245 (767)
Q Consensus 182 g~~i~~l~h~~~VtsVafSPdG~~LAsgSdd-----~-V~VWDl~t~~~~~--------~~~~l~~h~~--~VtsVaFSP 245 (767)
++++..+.+...+.+++|+|++++|++++.+ + |++||++...... ....+..|.. .+.+++|+|
T Consensus 106 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (369)
T 3zwl_B 106 GQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWST 185 (369)
T ss_dssp CCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECG
T ss_pred CcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcC
Confidence 9999998899999999999999999999875 4 9999998765322 1234445555 899999999
Q ss_pred CCCeEEEEEe-----eCCcCC-CCcceeEeecCCCcc---C-----------CCCeEEEecCCCCCCCceeeccCCCCCC
Q 004217 246 HAAPLLLTAE-----VNDLDS-SESSLTLATSPGYWR---Y-----------PPPVICMAGAHSSSHPGLAEEVPLITPP 305 (767)
Q Consensus 246 DG~~LlaSgs-----vwdl~s-~~~~~~l~t~sG~~~---~-----------p~~~v~l~~~~Ssd~~~L~sg~~~~slp 305 (767)
+++++++++. +||++. ......+....+... + ....+.+|+........... ...+
T Consensus 186 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~ 261 (369)
T 3zwl_B 186 KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE----TDCP 261 (369)
T ss_dssp GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----CSSC
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec----CCCC
Confidence 9998877654 788775 333222222211100 0 12334445543332222222 2345
Q ss_pred ceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeeec
Q 004217 306 FLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVLS 359 (767)
Q Consensus 306 il~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~~ 359 (767)
+....|+|++..+++...+......... .......+.+||..+++....+.
T Consensus 262 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~d~~~~~~~~~~~ 312 (369)
T 3zwl_B 262 LNTAVITPLKEFIILGGGQEAKDVTTTS---ANEGKFEARFYHKIFEEEIGRVQ 312 (369)
T ss_dssp EEEEEECSSSSEEEEEECCC----------------CEEEEEETTTCCEEEEEE
T ss_pred ceeEEecCCCceEEEeecCCCceEEEEe---cCCCcceeEEEecCCCcchhhee
Confidence 5578999999999986654432221111 11223368899998888777664
No 79
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.88 E-value=8.6e-22 Score=214.61 Aligned_cols=260 Identities=11% Similarity=0.085 Sum_probs=189.3
Q ss_pred cceEEEEEEc-CCCEEEEEeCCCeEEEEeCCC---C-----CCC-CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECC--
Q 004217 70 FSQIFEAGRD-ARRGLASWVEAESLHHLRPKY---C-----PLS-PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQ-- 137 (767)
Q Consensus 70 ~s~~~vA~sd-~g~~LaSgs~DgsIrlWd~~t---~-----~L~-gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~-- 137 (767)
.....+++.. ++..|++++.|++|++||... + .+. +|...|.+++|+|++++|++|+.|++|+|||++
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~ 143 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHY 143 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccc
Confidence 3477788888 899999999999999999876 2 122 699999999999999999999999999999995
Q ss_pred -CCeEEEEEcc------------CCCCcEEEE--EccCCCcEEEEEeCCCeEEEEECCCCeEEEeec---CCCCeEEEEE
Q 004217 138 -TGSCLKVLHG------------HRRTPWVVR--FHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAF 199 (767)
Q Consensus 138 -tg~~l~~L~g------------H~~~V~sLa--fsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~---h~~~VtsVaf 199 (767)
+++.+..+.+ +...+.++. +++ ++++|++++.|++|++||+++++++..+. |...|++++|
T Consensus 144 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~ 222 (437)
T 3gre_A 144 QQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICI 222 (437)
T ss_dssp EETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEE
T ss_pred cCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEE
Confidence 5555444332 445566666 556 78999999999999999999999988864 6789999999
Q ss_pred cCCCCEEEEEECCc-EEEEEcCCCccccCCeEE-ecCCCCeEEEEEcc----CCCeEEEEEe-----eCCcCCCCcceeE
Q 004217 200 HASGELLAVASGHK-LYIWRYNMREETSSPRIV-LRTRRSLRAVHFHP----HAAPLLLTAE-----VNDLDSSESSLTL 268 (767)
Q Consensus 200 SPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l-~~h~~~VtsVaFSP----DG~~LlaSgs-----vwdl~s~~~~~~l 268 (767)
+|++++|++|+.++ |++||+++++.+. .+ ..|...|++++|+| ++.+|++++. +||++.+.....+
T Consensus 223 s~~~~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 299 (437)
T 3gre_A 223 DEECCVLILGTTRGIIDIWDIRFNVLIR---SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAF 299 (437)
T ss_dssp CTTSCEEEEEETTSCEEEEETTTTEEEE---EEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEEcCCccEEE---EEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEE
Confidence 99999999999776 9999999877544 33 37788999996665 5666665543 8888876655444
Q ss_pred eecCCCccCCCCeEEEecCCCCCCCceeecc---CCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeee
Q 004217 269 ATSPGYWRYPPPVICMAGAHSSSHPGLAEEV---PLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLL 345 (767)
Q Consensus 269 ~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg~---~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~ 345 (767)
....+. +. .+.+ .++...+.... .....++...+|+ ++..++. ++....+.
T Consensus 300 ~~~~~~---~~-~~~~----~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s-----------------~~~d~~i~ 353 (437)
T 3gre_A 300 INSDEQ---PS-MEHF----LPIEKGLEELNFCGIRSLNALSTISVS-NDKILLT-----------------DEATSSIV 353 (437)
T ss_dssp ESSSSC---CC-GGGG----SCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEE-----------------EGGGTEEE
T ss_pred EcCCCC---Cc-ccee----cccccccccceecccccCCceEEEEEC-CceEEEe-----------------cCCCCeEE
Confidence 433221 11 0110 11111111000 1123345678899 7766665 22334689
Q ss_pred eccCCCCceeeeec
Q 004217 346 TYSTPSGQYELVLS 359 (767)
Q Consensus 346 ~~~~~~~q~~~~~~ 359 (767)
+||..+++....+.
T Consensus 354 ~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 354 MFSLNELSSSKAVI 367 (437)
T ss_dssp EEETTCGGGCEEEE
T ss_pred EEECCCcccceEEe
Confidence 99999998887774
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=2.9e-21 Score=203.22 Aligned_cols=191 Identities=13% Similarity=0.130 Sum_probs=157.4
Q ss_pred eEEEEEEcC--CCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCeEEEEeCCCeEEEEECCCCe-
Q 004217 72 QIFEAGRDA--RRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS- 140 (767)
Q Consensus 72 ~~~vA~sd~--g~~LaSgs~DgsIrlWd~~t~------~L~gH~~sVtsVaFSpD--G~~LASgs~DGtVrVWDl~tg~- 140 (767)
...+++... +..|++++.|+.|++||+.++ .+..|...|.+++|+|+ +++|++++.|+.|++||+.++.
T Consensus 58 v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 137 (379)
T 3jrp_A 58 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT 137 (379)
T ss_dssp EEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC
T ss_pred EEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc
Confidence 556666544 899999999999999999876 35689999999999999 9999999999999999998873
Q ss_pred -EEEEEccCCCCcEEEEEccC------------CCcEEEEEeCCCeEEEEECCCCeE----EEee-cCCCCeEEEEEcCC
Q 004217 141 -CLKVLHGHRRTPWVVRFHPL------------NPTIIASGSLDHEVRLWNASTAEC----IGSR-DFYRPIASIAFHAS 202 (767)
Q Consensus 141 -~l~~L~gH~~~V~sLafsP~------------dg~lLaSgS~DGtVrIWDl~tg~~----i~~l-~h~~~VtsVafSPd 202 (767)
....+.+|...|.+++|+|. ++++|++++.|+.|++||+++++. ...+ .|...|.+++|+|+
T Consensus 138 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~ 217 (379)
T 3jrp_A 138 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT 217 (379)
T ss_dssp CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCC
T ss_pred eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCC
Confidence 45567889999999999995 589999999999999999987653 2333 48899999999999
Q ss_pred ---CCEEEEEECCc-EEEEEcCCCccccCCe--EEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCC
Q 004217 203 ---GELLAVASGHK-LYIWRYNMREETSSPR--IVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSS 262 (767)
Q Consensus 203 ---G~~LAsgSdd~-V~VWDl~t~~~~~~~~--~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~ 262 (767)
+++|++++.++ |++||++++....... ....|...|++++|+|++++|++++. +|++...
T Consensus 218 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 218 VLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred CCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 89999999666 9999999875321111 12347889999999999998888765 6777643
No 81
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.88 E-value=1.9e-21 Score=214.13 Aligned_cols=206 Identities=16% Similarity=0.151 Sum_probs=157.6
Q ss_pred CCCCCCeEEEEECC-CCCeEEEEeCCCeEEEEECCCCeE--EEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECC
Q 004217 104 SPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSC--LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS 180 (767)
Q Consensus 104 ~gH~~sVtsVaFSp-DG~~LASgs~DGtVrVWDl~tg~~--l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~ 180 (767)
.+|...|++|+|+| ++++||+|+.||+|+|||+.+++. ...+.+|.+.|++|+|+|.++++|++++.|++|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 46888999999999 678999999999999999987653 445678999999999999778999999999999999998
Q ss_pred CCeEEEeec---CCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-
Q 004217 181 TAECIGSRD---FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE- 255 (767)
Q Consensus 181 tg~~i~~l~---h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs- 255 (767)
++....... +...+.+++|+|++++|++|+.++ |++||++.... ..+.+|...|++++|+|++..++++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~----~~~~~h~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL----WNLRMHKKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC----CCSBCCSSCEEEEEECTTCSSEEEEEET
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCccee----EEEecccceEEeeeecCCCceEEEEecC
Confidence 776544433 344678999999999999999766 99999975432 246789999999999999987777665
Q ss_pred -----eCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCc
Q 004217 256 -----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGAT 330 (767)
Q Consensus 256 -----vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~ 330 (767)
+||++.......+. .......++..++|+||+.+|+..
T Consensus 272 d~~v~iwd~~~~~~~~~~~----------------------------~~~~h~~~v~~~~~spdg~~l~s~--------- 314 (435)
T 4e54_B 272 DQTVKIWDLRQVRGKASFL----------------------------YSLPHRHPVNAACFSPDGARLLTT--------- 314 (435)
T ss_dssp TSBCCEEETTTCCSSSCCS----------------------------BCCBCSSCEEECCBCTTSSEEEEE---------
T ss_pred cceeeEEecccccccceEE----------------------------EeeeccccccceeECCCCCeeEEE---------
Confidence 55555333211111 111123456678899999999872
Q ss_pred ccccccccCCceeeeeccCCCCceeeee
Q 004217 331 RTQQSLRSSSSVRLLTYSTPSGQYELVL 358 (767)
Q Consensus 331 ~~~~~~~ss~~~~l~~~~~~~~q~~~~~ 358 (767)
+....+.+||..+++....+
T Consensus 315 --------~~D~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 315 --------DQKSEIRVYSASQWDCPLGL 334 (435)
T ss_dssp --------ESSSCEEEEESSSSSSEEEE
T ss_pred --------cCCCEEEEEECCCCccceEE
Confidence 22345788998877665554
No 82
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.88 E-value=7.1e-21 Score=209.51 Aligned_cols=188 Identities=17% Similarity=0.249 Sum_probs=156.4
Q ss_pred eEEEEEEcC-CCEEEEEeCCCeEEEEeCCC----------C----CCCCCCCCeEEEEECCCCC-eEEEEeCCCeEEEEE
Q 004217 72 QIFEAGRDA-RRGLASWVEAESLHHLRPKY----------C----PLSPPPRSTIAAAFSPDGK-TLASTHGDHTVKIID 135 (767)
Q Consensus 72 ~~~vA~sd~-g~~LaSgs~DgsIrlWd~~t----------~----~L~gH~~sVtsVaFSpDG~-~LASgs~DGtVrVWD 135 (767)
...+++... +..|++++.++.|++|++.. . .+.+|...|.+++|+|+++ +|++|+.||.|+|||
T Consensus 131 v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 210 (430)
T 2xyi_A 131 VNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWD 210 (430)
T ss_dssp CSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEE
T ss_pred EEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEe
Confidence 445666665 78899999999999999975 2 2568999999999999988 999999999999999
Q ss_pred CCCCeE-------EEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCC---eEEEee-cCCCCeEEEEEcCCCC
Q 004217 136 CQTGSC-------LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA---ECIGSR-DFYRPIASIAFHASGE 204 (767)
Q Consensus 136 l~tg~~-------l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg---~~i~~l-~h~~~VtsVafSPdG~ 204 (767)
+.++.. ...+.+|...|.+++|+|.++.+|++++.|+.|++||++++ +.+..+ .|...|++++|+|++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 290 (430)
T 2xyi_A 211 INATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSE 290 (430)
T ss_dssp TTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCT
T ss_pred CCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCC
Confidence 987422 45678999999999999977889999999999999999987 444444 6889999999999997
Q ss_pred -EEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe------eCCcCC
Q 004217 205 -LLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLDS 261 (767)
Q Consensus 205 -~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs------vwdl~s 261 (767)
+|++|+.++ |++||+++... ....+..|...|.+++|+|+++.++++++ +|++..
T Consensus 291 ~~l~tg~~dg~v~vwd~~~~~~--~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 291 FILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TEEEEEETTSEEEEEETTCTTS--CSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CEEEEEeCCCeEEEEeCCCCCC--CeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 688888665 99999998543 23467789999999999999987666654 666654
No 83
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.88 E-value=1.8e-21 Score=210.74 Aligned_cols=185 Identities=15% Similarity=0.168 Sum_probs=150.5
Q ss_pred eEEEEEEcCCCEEEE--EeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEE--E
Q 004217 72 QIFEAGRDARRGLAS--WVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK--V 144 (767)
Q Consensus 72 ~~~vA~sd~g~~LaS--gs~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~--~ 144 (767)
..+++++.+|+.++. ++.|++|++||+.+.+ ...|...|.+++|+|||++|++++.| .+++|+..+++.+. .
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKT 214 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEEC
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeee
Confidence 567888999998765 4478999999998873 22588899999999999999999865 56677777776553 3
Q ss_pred EccCCCCcEEEEEccCCCcEEEEEeCCC----eEEEEECCCCeEEE-----eecCCCCeEEEEEcCCCCEEEEEECCc-E
Q 004217 145 LHGHRRTPWVVRFHPLNPTIIASGSLDH----EVRLWNASTAECIG-----SRDFYRPIASIAFHASGELLAVASGHK-L 214 (767)
Q Consensus 145 L~gH~~~V~sLafsP~dg~lLaSgS~DG----tVrIWDl~tg~~i~-----~l~h~~~VtsVafSPdG~~LAsgSdd~-V 214 (767)
..+|...|.+++|+| ++.++++++.|+ .+++||+....... ...|...|++++|+|+|++||+|+.|+ |
T Consensus 215 ~~~~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V 293 (365)
T 4h5i_A 215 DFDKNWSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSI 293 (365)
T ss_dssp CCCTTEEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCE
T ss_pred cCCCCCCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEE
Confidence 457888999999999 999999999887 68999988765432 235888999999999999999999776 9
Q ss_pred EEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcC
Q 004217 215 YIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLD 260 (767)
Q Consensus 215 ~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~ 260 (767)
+|||+++++.+. ..+.+|...|++|+|+|||++|++++. +|++.
T Consensus 294 ~iwd~~~~~~~~--~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 294 ALVKLKDLSMSK--IFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEETTTTEEEE--EETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred EEEECCCCcEEE--EecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 999999988654 234679999999999999997776654 66654
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.88 E-value=5e-21 Score=207.91 Aligned_cols=184 Identities=20% Similarity=0.286 Sum_probs=159.1
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEE
Q 004217 80 ARRGLASWVEAESLHHLRPKYC-----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (767)
Q Consensus 80 ~g~~LaSgs~DgsIrlWd~~t~-----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~s 154 (767)
++..+++++.|+.|++||+... .+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+
T Consensus 185 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~ 264 (401)
T 4aez_A 185 NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKA 264 (401)
T ss_dssp ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCE
T ss_pred CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEE
Confidence 5678999999999999999843 46789999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCcEEEEEe--CCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEE--C-CcEEEEEcCCCccccCCe
Q 004217 155 VRFHPLNPTIIASGS--LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS--G-HKLYIWRYNMREETSSPR 229 (767)
Q Consensus 155 LafsP~dg~lLaSgS--~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgS--d-d~V~VWDl~t~~~~~~~~ 229 (767)
++|+|++..++++++ .|+.|++||+.+++++..+.+...|.+++|+|++++|++++ . +.|++||+.+++... ..
T Consensus 265 ~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~-~~ 343 (401)
T 4aez_A 265 VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTK-QV 343 (401)
T ss_dssp EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEE-EE
T ss_pred EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcccee-EE
Confidence 999996667888876 79999999999999999999999999999999999999864 3 449999999865433 23
Q ss_pred EEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCc
Q 004217 230 IVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSES 264 (767)
Q Consensus 230 ~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~ 264 (767)
.+.+|...|.+++|+|++++|++++. +|++..++.
T Consensus 344 ~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 344 DIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp EEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC---
T ss_pred EecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Confidence 46689999999999999998777654 677665443
No 85
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.88 E-value=1.4e-21 Score=206.49 Aligned_cols=184 Identities=18% Similarity=0.181 Sum_probs=150.0
Q ss_pred eEEEEEEc--CCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCeEEEEeCCCeEEEEECCCCeE
Q 004217 72 QIFEAGRD--ARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGSC 141 (767)
Q Consensus 72 ~~~vA~sd--~g~~LaSgs~DgsIrlWd~~t~------~L~gH~~sVtsVaFSpD--G~~LASgs~DGtVrVWDl~tg~~ 141 (767)
...+++.. ++..|++++.|++|++||..++ .+.+|...|.+++|+|+ +.+|++|+.|++|++||+.++..
T Consensus 60 V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~ 139 (316)
T 3bg1_A 60 VWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ 139 (316)
T ss_dssp EEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC
T ss_pred EEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC
Confidence 55566643 4889999999999999999875 25689999999999997 88999999999999999987632
Q ss_pred ---EEEEccCCCCcEEEEEccCC----------------CcEEEEEeCCCeEEEEECCCC---eEEEee-cCCCCeEEEE
Q 004217 142 ---LKVLHGHRRTPWVVRFHPLN----------------PTIIASGSLDHEVRLWNASTA---ECIGSR-DFYRPIASIA 198 (767)
Q Consensus 142 ---l~~L~gH~~~V~sLafsP~d----------------g~lLaSgS~DGtVrIWDl~tg---~~i~~l-~h~~~VtsVa 198 (767)
...+.+|...|.+++|+|.. +++|++|+.|++|++||++.. +++..+ .|...|.+++
T Consensus 140 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~ 219 (316)
T 3bg1_A 140 WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVA 219 (316)
T ss_dssp EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEE
T ss_pred cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEE
Confidence 34567899999999999931 368999999999999999865 344444 4889999999
Q ss_pred EcCCC----CEEEEEECCc-EEEEEcCCCcc-ccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 199 FHASG----ELLAVASGHK-LYIWRYNMREE-TSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 199 fSPdG----~~LAsgSdd~-V~VWDl~t~~~-~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
|+|++ ++|++++.|+ |++||+++... ......+..|...|++++|+|++++|++++.
T Consensus 220 ~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 220 WAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp CCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES
T ss_pred ecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC
Confidence 99987 7899999766 99999986321 1112345678999999999999998887775
No 86
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.88 E-value=9.9e-21 Score=199.43 Aligned_cols=187 Identities=16% Similarity=0.161 Sum_probs=160.1
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeE---
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC--- 141 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~--- 141 (767)
....+++..++..|++++.|+.|++||..+++ +..|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus 54 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~ 133 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWV 133 (372)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEE
T ss_pred cccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCccee
Confidence 46678888899999999999999999997762 468999999999999999999999999999999988762
Q ss_pred E-EEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECC------------------CCeEEEee-cCCCCeEEEEEcC
Q 004217 142 L-KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS------------------TAECIGSR-DFYRPIASIAFHA 201 (767)
Q Consensus 142 l-~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~------------------tg~~i~~l-~h~~~VtsVafSP 201 (767)
. ....+|...|.+++|+| ++++|++++.|+.|++||++ .++++..+ .|...|.+++|+|
T Consensus 134 ~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 212 (372)
T 1k8k_C 134 CKHIKKPIRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA 212 (372)
T ss_dssp EEEECTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS
T ss_pred eeeeecccCCCeeEEEEcC-CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC
Confidence 3 33367899999999999 89999999999999999954 56777776 5888999999999
Q ss_pred CCCEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe----eCCcCC
Q 004217 202 SGELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE----VNDLDS 261 (767)
Q Consensus 202 dG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs----vwdl~s 261 (767)
++++|++++.++ |++||+++++.+. .+..|...|.+++|+|++++++++.. +|++..
T Consensus 213 ~~~~l~~~~~d~~i~i~d~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 213 NGSRVAWVSHDSTVCLADADKKMAVA---TLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp SSSEEEEEETTTEEEEEEGGGTTEEE---EEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred CCCEEEEEeCCCEEEEEECCCCceeE---EEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 999999999766 9999999887654 67788899999999999986555422 566654
No 87
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.88 E-value=5.4e-21 Score=204.11 Aligned_cols=173 Identities=19% Similarity=0.175 Sum_probs=151.7
Q ss_pred cceEEEEEE----cCCCE-EEEEeCCCeEEEEeCCC------CC---------C-------CCCCCCeEEEEECCCCCeE
Q 004217 70 FSQIFEAGR----DARRG-LASWVEAESLHHLRPKY------CP---------L-------SPPPRSTIAAAFSPDGKTL 122 (767)
Q Consensus 70 ~s~~~vA~s----d~g~~-LaSgs~DgsIrlWd~~t------~~---------L-------~gH~~sVtsVaFSpDG~~L 122 (767)
.....+++. .++.. |++++.|+.|++||+.. .+ + ..|...|.+++|+|++ +|
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l 200 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LI 200 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EE
T ss_pred CcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eE
Confidence 446777788 78888 99999999999999987 32 2 3488899999999999 99
Q ss_pred EEEeCCCeEEEEECCCCeEEEEEcc---C---CCCcEEEEEccCCCcEEEEEeCC---CeEEEEECCCCeEEEeec----
Q 004217 123 ASTHGDHTVKIIDCQTGSCLKVLHG---H---RRTPWVVRFHPLNPTIIASGSLD---HEVRLWNASTAECIGSRD---- 189 (767)
Q Consensus 123 ASgs~DGtVrVWDl~tg~~l~~L~g---H---~~~V~sLafsP~dg~lLaSgS~D---GtVrIWDl~tg~~i~~l~---- 189 (767)
++++.|+.|++||+++++.+..+.. | ...|.+++|+| ++++|++++.| +.|++||+++++.+..+.
T Consensus 201 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~ 279 (397)
T 1sq9_A 201 ATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTH 279 (397)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--
T ss_pred EEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcc
Confidence 9999999999999999999999998 9 99999999999 89999999999 999999999999888764
Q ss_pred ----------CCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEEe------cC---------------CCC
Q 004217 190 ----------FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVL------RT---------------RRS 237 (767)
Q Consensus 190 ----------h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~------~h---------------~~~ 237 (767)
|...|.+++|+|++++|++++.++ |++||+++++.+. .+. .| ...
T Consensus 280 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 356 (397)
T 1sq9_A 280 SSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERIT---TLNMHCDDIEIEEDILAVDEHGDSLAEPG 356 (397)
T ss_dssp ------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE---EEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred cccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeE---EEecccCcccchhhhhccccccccccCCc
Confidence 789999999999999999999666 9999999887655 555 66 899
Q ss_pred eEEEEEccCC
Q 004217 238 LRAVHFHPHA 247 (767)
Q Consensus 238 VtsVaFSPDG 247 (767)
|++++|+|++
T Consensus 357 v~~~~~~~~g 366 (397)
T 1sq9_A 357 VFDVKFLKKG 366 (397)
T ss_dssp EEEEEEECTT
T ss_pred eeEEEecccc
Confidence 9999999998
No 88
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.2e-20 Score=223.81 Aligned_cols=183 Identities=16% Similarity=0.148 Sum_probs=156.6
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCeEEEEeCCCeEEEEECCCCe--E
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS--C 141 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~------~L~gH~~sVtsVaFSpD--G~~LASgs~DGtVrVWDl~tg~--~ 141 (767)
...++++.++..|++++.|+.|++|+.... .+.+|.+.|++++|+++ +++|++|+.||+|++||+.+++ .
T Consensus 12 V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~ 91 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQ 91 (753)
T ss_dssp EEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEE
T ss_pred eEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccc
Confidence 556777788999999999999999998743 47799999999999997 9999999999999999999987 7
Q ss_pred EEEEccCCCCcEEEEEccCC--CcEEEEEeCCCeEEEEECCCCeE---EEeecCCCCeEEEEEcC-------------CC
Q 004217 142 LKVLHGHRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTAEC---IGSRDFYRPIASIAFHA-------------SG 203 (767)
Q Consensus 142 l~~L~gH~~~V~sLafsP~d--g~lLaSgS~DGtVrIWDl~tg~~---i~~l~h~~~VtsVafSP-------------dG 203 (767)
+..+.+|...|.+++|+| + ++++++|+.||+|++||++++.. .....|...|.+++|+| ++
T Consensus 92 ~~~~~~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~ 170 (753)
T 3jro_A 92 IAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKES 170 (753)
T ss_dssp EEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGG
T ss_pred cccccCCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCC
Confidence 788899999999999999 7 89999999999999999998733 23346889999999999 58
Q ss_pred CEEEEEECCc-EEEEEcCCCccc-cCCeEEecCCCCeEEEEEccC---CCeEEEEEe
Q 004217 204 ELLAVASGHK-LYIWRYNMREET-SSPRIVLRTRRSLRAVHFHPH---AAPLLLTAE 255 (767)
Q Consensus 204 ~~LAsgSdd~-V~VWDl~t~~~~-~~~~~l~~h~~~VtsVaFSPD---G~~LlaSgs 255 (767)
.+|++|+.++ |++||+++.... .....+.+|...|++++|+|+ ++++++++.
T Consensus 171 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 171 RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp CCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred CEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 8999999666 999999877532 122356789999999999999 776666654
No 89
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.87 E-value=5.9e-20 Score=201.61 Aligned_cols=250 Identities=14% Similarity=0.211 Sum_probs=189.4
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEE
Q 004217 79 DARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (767)
Q Consensus 79 d~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~s 154 (767)
.++..|++++.|+.|++||..++ .+.+|...|.+++|+ +++|++|+.|++|++||+.+++.+..+.+|...|.+
T Consensus 127 ~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~ 204 (445)
T 2ovr_B 127 FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 204 (445)
T ss_dssp EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEE
Confidence 35899999999999999999876 478999999999998 679999999999999999999999999999999999
Q ss_pred EEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEEe
Q 004217 155 VRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVL 232 (767)
Q Consensus 155 LafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~ 232 (767)
+.|++ +.+++|+.|++|++||+.+++++..+ .|...|.+++| ++++|++++.++ |++||+++++... .+.
T Consensus 205 ~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~ 276 (445)
T 2ovr_B 205 MHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLH---TLQ 276 (445)
T ss_dssp EEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEE---EEC
T ss_pred EEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeE---Eec
Confidence 99964 78999999999999999999988775 58899999999 788899998666 9999999887654 677
Q ss_pred cCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCcc------------CCCCeEEEecCCCCCCCce
Q 004217 233 RTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWR------------YPPPVICMAGAHSSSHPGL 295 (767)
Q Consensus 233 ~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~------------~p~~~v~l~~~~Ssd~~~L 295 (767)
+|...|.++.| ++.++++++. +||++.++....+....+... .....+.+|+...+.....
T Consensus 277 ~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 354 (445)
T 2ovr_B 277 GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQT 354 (445)
T ss_dssp CCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 89999999999 7787777664 888876655443332211100 0123455555444333333
Q ss_pred eeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeeec
Q 004217 296 AEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVLS 359 (767)
Q Consensus 296 ~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~~ 359 (767)
..+......++....| ++..+++ ++....+.+||..+++....+.
T Consensus 355 ~~~~~~~~~~v~~~~~--~~~~l~s-----------------~~~dg~v~iwd~~~~~~~~~~~ 399 (445)
T 2ovr_B 355 LQGPNKHQSAVTCLQF--NKNFVIT-----------------SSDDGTVKLWDLKTGEFIRNLV 399 (445)
T ss_dssp ECSTTSCSSCEEEEEE--CSSEEEE-----------------EETTSEEEEEETTTCCEEEEEE
T ss_pred EccCCCCCCCEEEEEE--CCCEEEE-----------------EeCCCeEEEEECCCCceeeeee
Confidence 3222223334444555 3555554 1234568899999988777663
No 90
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.2e-21 Score=222.35 Aligned_cols=209 Identities=9% Similarity=0.029 Sum_probs=151.3
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC--------CCCCCCCeEEEEECCC------CCeEEEEeCCCeEEEEECCCCeE-----
Q 004217 81 RRGLASWVEAESLHHLRPKYCP--------LSPPPRSTIAAAFSPD------GKTLASTHGDHTVKIIDCQTGSC----- 141 (767)
Q Consensus 81 g~~LaSgs~DgsIrlWd~~t~~--------L~gH~~sVtsVaFSpD------G~~LASgs~DGtVrVWDl~tg~~----- 141 (767)
+..+++++.|++|++|++.+++ +..|.+.|.+++|+|+ +.+||+++.|++|+|||+.+++.
T Consensus 173 ~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~ 252 (524)
T 2j04_B 173 LEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF 252 (524)
T ss_dssp ---------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE
T ss_pred hhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc
Confidence 3457888899999999997764 3467889999999996 57999999999999999987632
Q ss_pred ------EEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeE-EEe-ecCCCCeEEE--EEcCCC-CEEEEEE
Q 004217 142 ------LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC-IGS-RDFYRPIASI--AFHASG-ELLAVAS 210 (767)
Q Consensus 142 ------l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~-i~~-l~h~~~VtsV--afSPdG-~~LAsgS 210 (767)
...+.+|...|++++|++ + ..|++|+.||+|++||+++++. ... ..|...|.++ +|+|+| ++||+++
T Consensus 253 ~~~~~p~~~l~~h~~~v~sv~~s~-~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S 330 (524)
T 2j04_B 253 KMCEKPSLTLSLADSLITTFDFLS-P-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVA 330 (524)
T ss_dssp ECCCSCSEEECCTTTCEEEEEESS-S-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEE
T ss_pred eeecCceEEEEcCCCCEEEEEecC-C-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEec
Confidence 247889999999999998 4 5899999999999999997643 333 4589999999 578888 8999999
Q ss_pred CCc-EEEEEcCCCccccCCeEEecCCC--CeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCCccCCCCeEEEecC
Q 004217 211 GHK-LYIWRYNMREETSSPRIVLRTRR--SLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGA 287 (767)
Q Consensus 211 dd~-V~VWDl~t~~~~~~~~~l~~h~~--~VtsVaFSPDG~~LlaSgsvwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~ 287 (767)
.|+ |+|||+++.+... .+.+|.. .|.+++|+|+++.+++++... .+.+|+.
T Consensus 331 ~D~tvklWD~~~~~~~~---~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~-----------------------tv~lwd~ 384 (524)
T 2j04_B 331 VDGYFYIFNPKDIATTK---TTVSRFRGSNLVPVVYCPQIYSYIYSDGAS-----------------------SLRAVPS 384 (524)
T ss_dssp TTSEEEEECGGGHHHHC---EEEEECSCCSCCCEEEETTTTEEEEECSSS-----------------------EEEEEET
T ss_pred cCCeEEEEECCCCCccc---ccccccccCcccceEeCCCcCeEEEeCCCC-----------------------cEEEEEC
Confidence 766 9999999877644 4555543 588999999999776654311 1222322
Q ss_pred CCCCCCceeeccCCCCCCceeeEEecCCCEEEE
Q 004217 288 HSSSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (767)
Q Consensus 288 ~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva 320 (767)
..+.......+ ...+++.++|+||+..|+.
T Consensus 385 ~~~~~~~~l~g---H~~~V~sva~Sp~g~~l~S 414 (524)
T 2j04_B 385 RAAFAVHPLVS---RETTITAIGVSRLHPMVLA 414 (524)
T ss_dssp TCTTCCEEEEE---CSSCEEEEECCSSCCBCEE
T ss_pred cccccceeeec---CCCceEEEEeCCCCCeEEE
Confidence 22222121222 2346677899999988876
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.87 E-value=4.3e-21 Score=200.59 Aligned_cols=180 Identities=10% Similarity=0.104 Sum_probs=148.8
Q ss_pred ceEEEEEEcCCC-EEEEEeC---CCeEEEEeCCCCCC-----CCCCCCeEEEEECCC---CCeEEEEeCCCeEEEEECCC
Q 004217 71 SQIFEAGRDARR-GLASWVE---AESLHHLRPKYCPL-----SPPPRSTIAAAFSPD---GKTLASTHGDHTVKIIDCQT 138 (767)
Q Consensus 71 s~~~vA~sd~g~-~LaSgs~---DgsIrlWd~~t~~L-----~gH~~sVtsVaFSpD---G~~LASgs~DGtVrVWDl~t 138 (767)
....+++..++. .+++++. |+.|++|+..++++ .+|...|.+++|+|+ +++|++|+.|+.|++||+.+
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 99 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEA 99 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTS
T ss_pred ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCC
Confidence 356677777775 4556665 99999999988642 379999999999998 79999999999999999999
Q ss_pred Ce-EEEEEccCCCCcEEEEE------ccCCCcEEEEEeCCCeEEEEECCCCe-EEEeec-C----CCCeEEEE----EcC
Q 004217 139 GS-CLKVLHGHRRTPWVVRF------HPLNPTIIASGSLDHEVRLWNASTAE-CIGSRD-F----YRPIASIA----FHA 201 (767)
Q Consensus 139 g~-~l~~L~gH~~~V~sLaf------sP~dg~lLaSgS~DGtVrIWDl~tg~-~i~~l~-h----~~~VtsVa----fSP 201 (767)
++ .+..+.+|...|.++.| +| ++++|++++.|++|++||+++++ .+..+. + ...+.+++ |+|
T Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 178 (357)
T 3i2n_A 100 PEMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ 178 (357)
T ss_dssp CSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-
T ss_pred CCccEEEEEecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC
Confidence 88 88899999999999965 67 88999999999999999999886 555543 2 34788998 789
Q ss_pred CCCEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEcc---CCCeEEEEEe
Q 004217 202 SGELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHP---HAAPLLLTAE 255 (767)
Q Consensus 202 dG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSP---DG~~LlaSgs 255 (767)
++++|++++.++ |++||+++.+.. ....|...|.+++|+| ++.++++++.
T Consensus 179 ~~~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~l~~~~~ 232 (357)
T 3i2n_A 179 EERVVCAGYDNGDIKLFDLRNMALR----WETNIKNGVCSLEFDRKDISMNKLVATSL 232 (357)
T ss_dssp CCCEEEEEETTSEEEEEETTTTEEE----EEEECSSCEEEEEESCSSSSCCEEEEEES
T ss_pred CCCEEEEEccCCeEEEEECccCcee----eecCCCCceEEEEcCCCCCCCCEEEEECC
Confidence 999999999765 999999988753 3567889999999999 8998777664
No 92
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.87 E-value=9.1e-20 Score=186.99 Aligned_cols=181 Identities=12% Similarity=0.124 Sum_probs=153.6
Q ss_pred cceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC-------CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEE
Q 004217 70 FSQIFEAGRDARRGLASWVEAESLHHLRPKYC-------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCL 142 (767)
Q Consensus 70 ~s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~-------~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l 142 (767)
.....+++..++..|++++.|+.|++|++... .+.+|...|.+++| ++++|++++.|+.|++|| .++.+
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~ 135 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLV 135 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEE
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEE
Confidence 34677888899999999999999999998653 36689999999999 678999999999999999 67888
Q ss_pred EEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee--cCCCCeEEEEEcCCCCEEEEEECCc-EEEEEc
Q 004217 143 KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASGHK-LYIWRY 219 (767)
Q Consensus 143 ~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l--~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl 219 (767)
..+..|...+.++.|+|.+++++++++.|+.|++||. .+....+ .+...+.+++|+|++. +++++.++ |++||+
T Consensus 136 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~ 212 (313)
T 3odt_A 136 YNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDM 212 (313)
T ss_dssp EEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEET
T ss_pred EecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEEC
Confidence 8999999999999999878899999999999999994 4444444 3889999999999998 77777555 999999
Q ss_pred CCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCC
Q 004217 220 NMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDS 261 (767)
Q Consensus 220 ~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s 261 (767)
++++.+. .+..|...|++++|+|++. +++++. +||+..
T Consensus 213 ~~~~~~~---~~~~~~~~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 213 HTGDVLR---TYEGHESFVYCIKLLPNGD-IVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp TTCCEEE---EEECCSSCEEEEEECTTSC-EEEEETTSEEEEECTTT
T ss_pred Cchhhhh---hhhcCCceEEEEEEecCCC-EEEEecCCEEEEEECCC
Confidence 9887655 6778999999999999995 666553 555554
No 93
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.87 E-value=3.5e-20 Score=203.47 Aligned_cols=179 Identities=16% Similarity=0.299 Sum_probs=153.6
Q ss_pred EcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcE
Q 004217 78 RDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (767)
Q Consensus 78 sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~ 153 (767)
.-++..+++++.|+.|++||..++ .+.+|...|.+++| ++++|++|+.||+|++||+.+++.+..+.+|...|.
T Consensus 140 ~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~ 217 (435)
T 1p22_A 140 QYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL 217 (435)
T ss_dssp ECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEE
T ss_pred EECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEE
Confidence 348899999999999999999886 47799999999999 789999999999999999999999999999999999
Q ss_pred EEEEccCCCcEEEEEeCCCeEEEEECCCCeEE---Ee-ecCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCC
Q 004217 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECI---GS-RDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSP 228 (767)
Q Consensus 154 sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i---~~-l~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~ 228 (767)
+++|++ +.+++|+.|++|++||+.+++.. .. ..|...|.+++| ++++|++++.++ |++||+++++.+.
T Consensus 218 ~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~-- 290 (435)
T 1p22_A 218 HLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVR-- 290 (435)
T ss_dssp EEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEE--
T ss_pred EEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEE--
Confidence 999975 69999999999999999987754 22 458899999999 788999999766 9999999987655
Q ss_pred eEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeE
Q 004217 229 RIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTL 268 (767)
Q Consensus 229 ~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l 268 (767)
.+..|...|.++.|+ ++++++++. +||++.+.....+
T Consensus 291 -~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~ 332 (435)
T 1p22_A 291 -TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL 332 (435)
T ss_dssp -EEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred -EEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 677899999999994 566666554 8888866554433
No 94
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.87 E-value=1.9e-20 Score=200.40 Aligned_cols=191 Identities=13% Similarity=0.088 Sum_probs=154.3
Q ss_pred ceEEEEEEc-CCCEEEEEeCCCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEE
Q 004217 71 SQIFEAGRD-ARRGLASWVEAESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK 143 (767)
Q Consensus 71 s~~~vA~sd-~g~~LaSgs~DgsIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~ 143 (767)
....+++.. ++..|++++.|+.|++||+.... ..+|...|.+++|+|++++|++++.|+.|++||+ +++.+.
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~ 198 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIF 198 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEE
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEE
Confidence 366677777 67999999999999999998652 2355688999999999999999999999999999 577889
Q ss_pred EEccCCCCcEEEEEccCCCc-EEEEEeCCCeEEEEECCC----CeEEEeecCCCCeEEEEEcC-CCCEEEEEECCc-EEE
Q 004217 144 VLHGHRRTPWVVRFHPLNPT-IIASGSLDHEVRLWNAST----AECIGSRDFYRPIASIAFHA-SGELLAVASGHK-LYI 216 (767)
Q Consensus 144 ~L~gH~~~V~sLafsP~dg~-lLaSgS~DGtVrIWDl~t----g~~i~~l~h~~~VtsVafSP-dG~~LAsgSdd~-V~V 216 (767)
.+.+|...|.+++|+| +++ +|++++.|++|++||+++ +.++..+.|...|.+++|+| ++++|++++.++ |++
T Consensus 199 ~~~~h~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~i 277 (383)
T 3ei3_B 199 KEKLHKAKVTHAEFNP-RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRV 277 (383)
T ss_dssp EEECSSSCEEEEEECS-SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEE
T ss_pred EeccCCCcEEEEEECC-CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEE
Confidence 9999999999999999 666 999999999999999998 77788888999999999999 999999999665 999
Q ss_pred EEcCCCccccCCeEEecC-------CC----------CeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeE
Q 004217 217 WRYNMREETSSPRIVLRT-------RR----------SLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTL 268 (767)
Q Consensus 217 WDl~t~~~~~~~~~l~~h-------~~----------~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l 268 (767)
||+++.+... .+..| .. .+..++|+||+++ +++. +||+..++....+
T Consensus 278 wd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 278 YSSYDWSKPD---QIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp EETTBTTSCS---EEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEE
T ss_pred EECCCCcccc---ccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeee
Confidence 9999877543 33333 22 3344555666554 2112 7888766554333
No 95
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.87 E-value=1.6e-20 Score=193.05 Aligned_cols=201 Identities=15% Similarity=0.139 Sum_probs=161.0
Q ss_pred ceEEEEEEc--CCCEEEEEeCCCeEEEEeCCCC-------------CCCCCCCCeEEEEECCC--CCeEEEEeCCCeEEE
Q 004217 71 SQIFEAGRD--ARRGLASWVEAESLHHLRPKYC-------------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKI 133 (767)
Q Consensus 71 s~~~vA~sd--~g~~LaSgs~DgsIrlWd~~t~-------------~L~gH~~sVtsVaFSpD--G~~LASgs~DGtVrV 133 (767)
....+++.. ++..|++++.|+.|++||+..+ .+.+|...|.+++|+|+ +++|++++.|+.|++
T Consensus 59 ~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~i 138 (351)
T 3f3f_A 59 SIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRL 138 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEE
T ss_pred cEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEE
Confidence 356667766 5899999999999999999764 35689999999999999 999999999999999
Q ss_pred EECCCCeEEEEEc-------------cCCCCcEEEEEccC--CCcEEEEEeCCCeEEEEECCCCeE--EEee-cCCCCeE
Q 004217 134 IDCQTGSCLKVLH-------------GHRRTPWVVRFHPL--NPTIIASGSLDHEVRLWNASTAEC--IGSR-DFYRPIA 195 (767)
Q Consensus 134 WDl~tg~~l~~L~-------------gH~~~V~sLafsP~--dg~lLaSgS~DGtVrIWDl~tg~~--i~~l-~h~~~Vt 195 (767)
||+.+++.+..+. +|...+.+++|+|. +++++++++.|+.+.+|+...++. +..+ .|...|.
T Consensus 139 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 218 (351)
T 3f3f_A 139 YDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIR 218 (351)
T ss_dssp EECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEE
T ss_pred ecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCccee
Confidence 9998876443222 68889999999993 389999999999999998888765 3333 4889999
Q ss_pred EEEEcCCC----CEEEEEECCc-EEEEEcCCCcc-------------------------------------------ccC
Q 004217 196 SIAFHASG----ELLAVASGHK-LYIWRYNMREE-------------------------------------------TSS 227 (767)
Q Consensus 196 sVafSPdG----~~LAsgSdd~-V~VWDl~t~~~-------------------------------------------~~~ 227 (767)
+++|+|++ ++|++++.|+ |++||++.... ...
T Consensus 219 ~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (351)
T 3f3f_A 219 SISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVEL 298 (351)
T ss_dssp EEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEE
T ss_pred EEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccE
Confidence 99999998 8999999766 99999987521 011
Q ss_pred CeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeec
Q 004217 228 PRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATS 271 (767)
Q Consensus 228 ~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~ 271 (767)
...+.+|...|++++|+|++++|++++. +|++........+...
T Consensus 299 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~ 347 (351)
T 3f3f_A 299 LSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSVI 347 (351)
T ss_dssp EEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred EEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhheeeh
Confidence 2345678999999999999998887764 7777765554444433
No 96
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.86 E-value=1.2e-20 Score=204.19 Aligned_cols=207 Identities=13% Similarity=0.092 Sum_probs=153.9
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC-------------CCCCCCCCeEEEEECCCCCeEEEEe--CCCeEEEEECCCCeEEEE
Q 004217 80 ARRGLASWVEAESLHHLRPKYC-------------PLSPPPRSTIAAAFSPDGKTLASTH--GDHTVKIIDCQTGSCLKV 144 (767)
Q Consensus 80 ~g~~LaSgs~DgsIrlWd~~t~-------------~L~gH~~sVtsVaFSpDG~~LASgs--~DGtVrVWDl~tg~~l~~ 144 (767)
++..|++++.|+.+|+|+.... ....+...+.+++|||||++|++++ .|++|+|||+++++++..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 3444555567888999987643 1234556799999999999987554 689999999999999988
Q ss_pred EccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe---ecCCCCeEEEEEcCCCCEEEEEECC-----cEEE
Q 004217 145 LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS---RDFYRPIASIAFHASGELLAVASGH-----KLYI 216 (767)
Q Consensus 145 L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~---l~h~~~VtsVafSPdG~~LAsgSdd-----~V~V 216 (767)
+. |...|.+++|+| +++++++++.| .+++|+..+++.+.. ..|...|.+++|+|+|+++++++.+ .+++
T Consensus 173 ~~-~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 173 IE-TRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp EE-CSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred eC-CCCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 86 778899999999 99999999855 567777777766543 3477789999999999999998843 2788
Q ss_pred EEcCCCcccc-CCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEee-cCCCccCCCCeEEEecCCC
Q 004217 217 WRYNMREETS-SPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLAT-SPGYWRYPPPVICMAGAHS 289 (767)
Q Consensus 217 WDl~t~~~~~-~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t-~sG~~~~p~~~v~l~~~~S 289 (767)
||+....... ....+.+|...|++++|+|||++|++++. +||+..++. +.+ ..+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~---~~~~~~g---------------- 310 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM---SKIFKQA---------------- 310 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE---EEEETTS----------------
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE---EEEecCc----------------
Confidence 8887665321 12356778999999999999997776654 555543221 111 122
Q ss_pred CCCCceeeccCCCCCCceeeEEecCCCEEEE
Q 004217 290 SSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (767)
Q Consensus 290 sd~~~L~sg~~~~slpil~psFSpDg~rIva 320 (767)
...++..++|+|||++|+.
T Consensus 311 ------------H~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 311 ------------HSFAITEVTISPDSTYVAS 329 (365)
T ss_dssp ------------SSSCEEEEEECTTSCEEEE
T ss_pred ------------ccCCEEEEEECCCCCEEEE
Confidence 3346667899999999986
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.86 E-value=8.6e-21 Score=201.59 Aligned_cols=230 Identities=15% Similarity=0.181 Sum_probs=171.6
Q ss_pred CeEEEEeCCCC----CCCCCCCCeEEEEECC-CCCeEEEEeCCCeEEEEECCCCeEEEEE-------------ccCCCCc
Q 004217 91 ESLHHLRPKYC----PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVL-------------HGHRRTP 152 (767)
Q Consensus 91 gsIrlWd~~t~----~L~gH~~sVtsVaFSp-DG~~LASgs~DGtVrVWDl~tg~~l~~L-------------~gH~~~V 152 (767)
..+++|+.+.. .+.+|.+.|++++|+| ++++|++|+.||.|+|||+.+++....+ .+|...|
T Consensus 23 ~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 102 (408)
T 4a11_B 23 STRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSV 102 (408)
T ss_dssp HHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCE
T ss_pred CcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcE
Confidence 34555655443 3678999999999999 9999999999999999999987654333 2599999
Q ss_pred EEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCC---CEEEEEECCc-EEEEEcCCCccccCC
Q 004217 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASG---ELLAVASGHK-LYIWRYNMREETSSP 228 (767)
Q Consensus 153 ~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG---~~LAsgSdd~-V~VWDl~t~~~~~~~ 228 (767)
.+++|+|.++++|++++.|+.|++||+.+++.+..+.+...+.++.|++.+ .++++++.++ |++||+++++...
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~-- 180 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSH-- 180 (408)
T ss_dssp EEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCE--
T ss_pred EEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceee--
Confidence 999999977789999999999999999999999999999999999999954 4899998665 9999999887544
Q ss_pred eEEecCCCCeEEEEEccCCCeEEEEEe------eCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCceeeccCCC
Q 004217 229 RIVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLI 302 (767)
Q Consensus 229 ~~l~~h~~~VtsVaFSPDG~~LlaSgs------vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg~~~~ 302 (767)
.+..|...|.+++|+|+++++++++. +||++........ ...+.. .............
T Consensus 181 -~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~-------------~~~~~~~~~~~~~ 244 (408)
T 4a11_B 181 -ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLIT--LDQHNG-------------KKSQAVESANTAH 244 (408)
T ss_dssp -EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEE--CCTTTT-------------CSCCCTTTSSCSC
T ss_pred -eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccc--cccccc-------------ccceeeccccccc
Confidence 67789999999999999997555554 6777654321111 111100 0000111111223
Q ss_pred CCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCcee
Q 004217 303 TPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYE 355 (767)
Q Consensus 303 slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~ 355 (767)
..++...+|+||+..+++.. ....+.+||..+++..
T Consensus 245 ~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~vwd~~~~~~~ 280 (408)
T 4a11_B 245 NGKVNGLCFTSDGLHLLTVG-----------------TDNRMRLWNSSNGENT 280 (408)
T ss_dssp SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTCCBC
T ss_pred cCceeEEEEcCCCCEEEEec-----------------CCCeEEEEECCCCccc
Confidence 44666899999999998732 2235788998876543
No 98
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.86 E-value=6.4e-20 Score=215.08 Aligned_cols=183 Identities=17% Similarity=0.228 Sum_probs=162.2
Q ss_pred cceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCC-eEEEE
Q 004217 70 FSQIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG-SCLKV 144 (767)
Q Consensus 70 ~s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg-~~l~~ 144 (767)
.....++++.++..|++++.|+.|++||..++ .+.+|...|.+++|+|++++|++++.|++|++||+.++ .....
T Consensus 56 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 135 (814)
T 3mkq_A 56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT 135 (814)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEE
T ss_pred CcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEE
Confidence 34777888999999999999999999999876 36689999999999999999999999999999999987 77788
Q ss_pred EccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec--CCCCeEEEEEcC--CCCEEEEEECCc-EEEEEc
Q 004217 145 LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD--FYRPIASIAFHA--SGELLAVASGHK-LYIWRY 219 (767)
Q Consensus 145 L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~--h~~~VtsVafSP--dG~~LAsgSdd~-V~VWDl 219 (767)
+.+|...|.+++|+|.+++.|++++.|++|++||+.+++....+. +...+.+++|+| ++.+|++++.++ |++||+
T Consensus 136 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~ 215 (814)
T 3mkq_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDY 215 (814)
T ss_dssp EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEET
T ss_pred EcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 899999999999999677899999999999999999877666543 448899999999 999999999766 999999
Q ss_pred CCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 220 NMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 220 ~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
++++... .+..|...|.+++|+|+++++++++.
T Consensus 216 ~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~ 248 (814)
T 3mkq_A 216 QTKSCVA---TLEGHMSNVSFAVFHPTLPIIISGSE 248 (814)
T ss_dssp TTTEEEE---EEECCSSCEEEEEECSSSSEEEEEET
T ss_pred CCCcEEE---EEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 9887644 67789999999999999997777654
No 99
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1e-20 Score=201.21 Aligned_cols=180 Identities=12% Similarity=0.052 Sum_probs=145.4
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCCC--CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECC---------CCeEEEEEc-c
Q 004217 80 ARRGLASWVEAESLHHLRPKYCPLS--PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQ---------TGSCLKVLH-G 147 (767)
Q Consensus 80 ~g~~LaSgs~DgsIrlWd~~t~~L~--gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~---------tg~~l~~L~-g 147 (767)
++..+++++.|+.|++||+.+++.. -....|.++.|+|+ +++++.|++|++|+.. +++.+..+. +
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~ 123 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD 123 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecC
Confidence 5678999999999999999876421 11456778888887 9999999999999665 555455554 7
Q ss_pred CCCCcEEEEEccC-CCcEEEEEeCCCeEEEEECCCCeEEEee--cCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCc
Q 004217 148 HRRTPWVVRFHPL-NPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASGHK-LYIWRYNMRE 223 (767)
Q Consensus 148 H~~~V~sLafsP~-dg~lLaSgS~DGtVrIWDl~tg~~i~~l--~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~ 223 (767)
|.+.|.+++|+|. +++++++++.|++|++||+++++++... .+...+.+++|+|+|.+|++|+.++ |++||+++++
T Consensus 124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT
T ss_pred CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC
Confidence 7789999999982 5689999999999999999999987665 3556799999999999999998666 9999999987
Q ss_pred cccCCeEEec-CCCCeEEEEEccCCCeEEEEEe----eCCcCCCCc
Q 004217 224 ETSSPRIVLR-TRRSLRAVHFHPHAAPLLLTAE----VNDLDSSES 264 (767)
Q Consensus 224 ~~~~~~~l~~-h~~~VtsVaFSPDG~~LlaSgs----vwdl~s~~~ 264 (767)
... ..+.. |...|++++|+|++.+|++++. +||++....
T Consensus 204 ~~~--~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 204 QAS--SRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVG 247 (343)
T ss_dssp SCC--EECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTT
T ss_pred CCc--cEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCc
Confidence 641 24555 9999999999999998877765 677765444
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.1e-19 Score=200.53 Aligned_cols=161 Identities=11% Similarity=0.116 Sum_probs=136.3
Q ss_pred CCCCCeEEEEECCCCCeE-EEEeCCCeEEEEECC--CCeEEEEEc--cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEEC
Q 004217 105 PPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQ--TGSCLKVLH--GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNA 179 (767)
Q Consensus 105 gH~~sVtsVaFSpDG~~L-ASgs~DGtVrVWDl~--tg~~l~~L~--gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl 179 (767)
+|.+.|.+++|+|++++| ++++.|+.|+|||+. +++.+..+. .|...|.+++|+| ++++|++++.|+.|++||+
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEEEEET
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CCCEEEEEeCCCcEEEEec
Confidence 455579999999999996 899999999999999 888888886 5778999999999 8999999999999999999
Q ss_pred CCCeEEE----e-ecCCCCeEEEEEcCC---CCEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeE
Q 004217 180 STAECIG----S-RDFYRPIASIAFHAS---GELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPL 250 (767)
Q Consensus 180 ~tg~~i~----~-l~h~~~VtsVafSPd---G~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~L 250 (767)
.+++... . ..|...|.+++|+|+ +++|++++.|+ |++||+++++.+. ....+|...|++++|+ ++++|
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVD--KWLFGHKHFVSSICCG-KDYLL 255 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEE--EECCCCSSCEEEEEEC-STTEE
T ss_pred CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceee--eeecCCCCceEEEEEC-CCCEE
Confidence 9877653 3 458899999999999 99999999765 9999999887544 2255899999999999 99987
Q ss_pred EEEEe-----eCCcCCCCcceeEe
Q 004217 251 LLTAE-----VNDLDSSESSLTLA 269 (767)
Q Consensus 251 laSgs-----vwdl~s~~~~~~l~ 269 (767)
++++. +||+..++....+.
T Consensus 256 ~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 256 LSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp EEEESSSEEEEEETTTCCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEeeeec
Confidence 77664 88988776554443
No 101
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.4e-19 Score=182.73 Aligned_cols=227 Identities=12% Similarity=0.134 Sum_probs=174.1
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCC---eEEEE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG---SCLKV 144 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg---~~l~~ 144 (767)
...+++ .++..|++++.|+.|++||..+. .+..|...|.+++|+|++++|++++.|+.|++||+... +.+..
T Consensus 21 v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~ 99 (313)
T 3odt_A 21 VRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYT 99 (313)
T ss_dssp EEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CE
T ss_pred cEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccc
Confidence 444555 67888999999999999999876 35689999999999999999999999999999998754 56788
Q ss_pred EccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcC-CCCEEEEEECCc-EEEEEcCC
Q 004217 145 LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHA-SGELLAVASGHK-LYIWRYNM 221 (767)
Q Consensus 145 L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSP-dG~~LAsgSdd~-V~VWDl~t 221 (767)
+.+|...|.++.|+ ++++++++.|+.|++|| .++.+..+ .|...+.+++|+| ++++|++++.++ |++||..
T Consensus 100 ~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~- 173 (313)
T 3odt_A 100 LIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND- 173 (313)
T ss_dssp ECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT-
T ss_pred hhhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC-
Confidence 89999999999994 57999999999999999 55555554 5889999999998 899999999766 9999933
Q ss_pred CccccCCeEEec-CCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCce
Q 004217 222 REETSSPRIVLR-TRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGL 295 (767)
Q Consensus 222 ~~~~~~~~~l~~-h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L 295 (767)
+... .+.. |...|.+++|+|++. +++++. +||++..+....+ .+
T Consensus 174 -~~~~---~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~---~~---------------------- 223 (313)
T 3odt_A 174 -KVIK---TFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTY---EG---------------------- 223 (313)
T ss_dssp -EEEE---EECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEE---EC----------------------
T ss_pred -ceEE---EEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhh---hc----------------------
Confidence 2222 3444 889999999999998 665543 5555533221111 11
Q ss_pred eeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeeec
Q 004217 296 AEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVLS 359 (767)
Q Consensus 296 ~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~~ 359 (767)
...++...+|+||+ ++++. +....+.+||..+++....+.
T Consensus 224 ------~~~~i~~~~~~~~~-~l~~~-----------------~~dg~v~iwd~~~~~~~~~~~ 263 (313)
T 3odt_A 224 ------HESFVYCIKLLPNG-DIVSC-----------------GEDRTVRIWSKENGSLKQVIT 263 (313)
T ss_dssp ------CSSCEEEEEECTTS-CEEEE-----------------ETTSEEEEECTTTCCEEEEEE
T ss_pred ------CCceEEEEEEecCC-CEEEE-----------------ecCCEEEEEECCCCceeEEEe
Confidence 22345578899998 45541 233468899998888777764
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.85 E-value=2.2e-20 Score=198.60 Aligned_cols=170 Identities=11% Similarity=0.008 Sum_probs=137.7
Q ss_pred EEEEeCCCeEEEEeCC---------CCC-----CCCCCCCeEEEEECC--CCCeEEEEeCCCeEEEEECCCCeEEEEEc-
Q 004217 84 LASWVEAESLHHLRPK---------YCP-----LSPPPRSTIAAAFSP--DGKTLASTHGDHTVKIIDCQTGSCLKVLH- 146 (767)
Q Consensus 84 LaSgs~DgsIrlWd~~---------t~~-----L~gH~~sVtsVaFSp--DG~~LASgs~DGtVrVWDl~tg~~l~~L~- 146 (767)
+++++.|++|++|+.. +.+ ..+|.+.|.+++|+| ++++|++++.|++|++||+++++.+..+.
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence 7888899999998665 332 226668999999999 99999999999999999999999877664
Q ss_pred cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEE-Eee-c-CCCCeEEEEEcCCCCEEEEEECCcEEEEEcCCCc
Q 004217 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI-GSR-D-FYRPIASIAFHASGELLAVASGHKLYIWRYNMRE 223 (767)
Q Consensus 147 gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i-~~l-~-h~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t~~ 223 (767)
.|...|.+++|+| ++.+|++|+.|++|++||+++++.+ ..+ . |...|.+++|+|+|.+|++++++.|++||+++.+
T Consensus 168 ~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 168 KSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp CSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred CCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 4556899999999 9999999999999999999998876 444 3 7899999999999999999998889999999887
Q ss_pred cccCCeEEecCCCCe--EEEEEccCCCeEEEEE
Q 004217 224 ETSSPRIVLRTRRSL--RAVHFHPHAAPLLLTA 254 (767)
Q Consensus 224 ~~~~~~~l~~h~~~V--tsVaFSPDG~~LlaSg 254 (767)
.......+..|...+ .+++|+|+|++|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 247 GTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp TCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred cceeecccccccccccceEEEECCCCCEEEEec
Confidence 654222222243344 4699999999888754
No 103
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.2e-20 Score=202.17 Aligned_cols=200 Identities=13% Similarity=0.106 Sum_probs=161.9
Q ss_pred CcceEEEEEEcCCCEEEEEeCCCeEEEEeCC---CCC--------------CCC--CCCCeEEEE--ECCCCCeEEEEeC
Q 004217 69 SFSQIFEAGRDARRGLASWVEAESLHHLRPK---YCP--------------LSP--PPRSTIAAA--FSPDGKTLASTHG 127 (767)
Q Consensus 69 s~s~~~vA~sd~g~~LaSgs~DgsIrlWd~~---t~~--------------L~g--H~~sVtsVa--FSpDG~~LASgs~ 127 (767)
......+++..++..|++++.|+.|++||+. .++ +.. +...+.++. +++++++|++++.
T Consensus 111 ~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (437)
T 3gre_A 111 SSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN 190 (437)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC
Confidence 3447778888899999999999999999984 221 112 667788887 6689999999999
Q ss_pred CCeEEEEECCCCeEEEEEcc--CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee--cCCCCeEEEEEcC--
Q 004217 128 DHTVKIIDCQTGSCLKVLHG--HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFHA-- 201 (767)
Q Consensus 128 DGtVrVWDl~tg~~l~~L~g--H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l--~h~~~VtsVafSP-- 201 (767)
|+.|++||+++++++..+.+ |...|.+++|+| ++++|++|+.|++|++||+++++++..+ .+...|.+++|+|
T Consensus 191 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 269 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFY 269 (437)
T ss_dssp TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTT
T ss_pred CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecccc
Confidence 99999999999999999988 899999999999 8999999999999999999999998876 5777899996654
Q ss_pred --CCCEEEEEECCc-EEEEEcCCCccccCCe---------------------EEec--CCCCeEEEEEccCCCeEEEEEe
Q 004217 202 --SGELLAVASGHK-LYIWRYNMREETSSPR---------------------IVLR--TRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 202 --dG~~LAsgSdd~-V~VWDl~t~~~~~~~~---------------------~l~~--h~~~VtsVaFSPDG~~LlaSgs 255 (767)
++++|++++.++ |++||+++++...... .+.+ |...|++++|+ ++++|++++.
T Consensus 270 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~ 348 (437)
T 3gre_A 270 GKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEA 348 (437)
T ss_dssp CTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGG
T ss_pred CCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCC
Confidence 677999999777 9999999877533100 0112 66779999999 7776666553
Q ss_pred -----eCCcCCCCcceeEee
Q 004217 256 -----VNDLDSSESSLTLAT 270 (767)
Q Consensus 256 -----vwdl~s~~~~~~l~t 270 (767)
+||+...+....+..
T Consensus 349 d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 349 TSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp GTEEEEEETTCGGGCEEEEC
T ss_pred CCeEEEEECCCcccceEEec
Confidence 888887776655553
No 104
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.7e-20 Score=215.69 Aligned_cols=232 Identities=10% Similarity=0.015 Sum_probs=172.5
Q ss_pred cceEEEEEEcCCCEEEEEeCCCeEEEEeCCCC--CCCCCCC-----CeEEEEECCCCCeEEEEeCCCeEEEEECCCCe--
Q 004217 70 FSQIFEAGRDARRGLASWVEAESLHHLRPKYC--PLSPPPR-----STIAAAFSPDGKTLASTHGDHTVKIIDCQTGS-- 140 (767)
Q Consensus 70 ~s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~--~L~gH~~-----sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~-- 140 (767)
.....++++.+|..|++++.|+.|++|+.+.. .+. |.. .|.+++|||||++||+|+.||+|+|||+.+++
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~ 164 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSEN 164 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTT
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccc
Confidence 34888999999999999999999999996543 344 554 59999999999999999999999999999875
Q ss_pred -----EEEEE----ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEE---Eee--cCCCCeEEEEEcCCCCEE
Q 004217 141 -----CLKVL----HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI---GSR--DFYRPIASIAFHASGELL 206 (767)
Q Consensus 141 -----~l~~L----~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i---~~l--~h~~~VtsVafSPdG~~L 206 (767)
.+.++ .+|...|.+++|+| ++ +++++.|++|++||+.+++.. ..+ .|...|.+++|+ |+.|
T Consensus 165 ~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~L 239 (588)
T 2j04_A 165 TPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKV 239 (588)
T ss_dssp CCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEE
T ss_pred cccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEE
Confidence 36776 67888999999999 66 888899999999999987742 344 477899999999 6899
Q ss_pred EEEECCcEEEEEcCCCccccCCeEEecCCCCeEEEEE--ccCCCeEEEEEe----eCCcCCCCcceeEeecCCC-ccCCC
Q 004217 207 AVASGHKLYIWRYNMREETSSPRIVLRTRRSLRAVHF--HPHAAPLLLTAE----VNDLDSSESSLTLATSPGY-WRYPP 279 (767)
Q Consensus 207 AsgSdd~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaF--SPDG~~LlaSgs----vwdl~s~~~~~~l~t~sG~-~~~p~ 279 (767)
|+++++.|++||+.+++... ...+|...|+.+.| +||+..++++.+ +|..+. .. ....+. .....
T Consensus 240 ASa~~~tIkLWd~~~~~~~~---~~~gh~~~V~~va~~~s~d~~~La~a~edG~klw~~d~----~~-~spd~~l~a~~d 311 (588)
T 2j04_A 240 VLTCPGYVHKIDLKNYSISS---LKTGSLENFHIIPLNHEKESTILLMSNKTSYKVLLEDE----LH-VTADNIIAPYLE 311 (588)
T ss_dssp EEECSSEEEEEETTTTEEEE---EECSCCSCCCEEEETTCSSCEEEEECSSCEEEEEESSS----EE-EECCCSSHHHHH
T ss_pred EEEeCCeEEEEECCCCeEEE---EEcCCCceEEEEEeeeCCCCCEEEEEcCCCCEEEeecc----EE-ECCCceEEEEcC
Confidence 99988779999999877533 34489999999999 999987666542 666551 11 111110 00012
Q ss_pred CeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEE
Q 004217 280 PVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (767)
Q Consensus 280 ~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva 320 (767)
..+.+|+..... ..... ....+..++|||||..+++
T Consensus 312 ~~v~lW~~~g~~-l~~~~----~~~~I~~va~SPdG~~lA~ 347 (588)
T 2j04_A 312 KKFKKWSTIWNE-FNNYE----TTLVIHGISLSPDGYSIAI 347 (588)
T ss_dssp HHHHHTTTTTTS-SSSSC----CEEEEEEEEECTTSSEEEE
T ss_pred CEEEEEECCCCc-eeeec----cceEEEEEEECCCCCEEEE
Confidence 234445432221 11111 1223446999999999987
No 105
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.84 E-value=2.3e-19 Score=184.85 Aligned_cols=204 Identities=18% Similarity=0.257 Sum_probs=166.3
Q ss_pred cceeecccccceec-------CCcceEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC------------------------
Q 004217 54 SSKRLLGETARKCS-------GSFSQIFEAGRDARRGLASWVEAESLHHLRPKYCP------------------------ 102 (767)
Q Consensus 54 ~sk~~wd~~~~~~~-------~s~s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~------------------------ 102 (767)
...++|+.....+. .......+++..++..|++++.|++|++|+..+++
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s 124 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSS 124 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEE
Confidence 34677875432221 12236788889999999999999999999987531
Q ss_pred ---------------------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCe----EEEEEccCCCCcEEEEE
Q 004217 103 ---------------------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS----CLKVLHGHRRTPWVVRF 157 (767)
Q Consensus 103 ---------------------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~----~l~~L~gH~~~V~sLaf 157 (767)
+.+|...+..+.|++++++|++++.|++|+|||+.+++ .......|.+.|..+.|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 204 (318)
T 4ggc_A 125 GSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW 204 (318)
T ss_dssp EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEE
T ss_pred EecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEe
Confidence 23688889999999999999999999999999998765 33556778899999999
Q ss_pred ccCCCcEE--EEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEE--C-CcEEEEEcCCCccccCCeEEe
Q 004217 158 HPLNPTII--ASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS--G-HKLYIWRYNMREETSSPRIVL 232 (767)
Q Consensus 158 sP~dg~lL--aSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgS--d-d~V~VWDl~t~~~~~~~~~l~ 232 (767)
+|.+.+++ ++++.+++|++||...........+...+..+.|+|++..+++++ . +.|++||+++++.+. .+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~---~l~ 281 (318)
T 4ggc_A 205 CPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA---ELK 281 (318)
T ss_dssp CTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE---EEC
T ss_pred cCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEE---EEc
Confidence 99666655 456788999999999999988888999999999999999888775 3 349999999988765 778
Q ss_pred cCCCCeEEEEEccCCCeEEEEEe-----eCCcC
Q 004217 233 RTRRSLRAVHFHPHAAPLLLTAE-----VNDLD 260 (767)
Q Consensus 233 ~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~ 260 (767)
+|.+.|++++|+|||++|++++. +||+.
T Consensus 282 gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 282 GHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 99999999999999998877664 56654
No 106
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.84 E-value=1.2e-19 Score=189.23 Aligned_cols=180 Identities=10% Similarity=0.042 Sum_probs=150.2
Q ss_pred ceEEEEEEcCCC-EEEEEeCCCeEEEEeC-CCC---CCCC--CCCCeEEEEECCCCCeEEEEeCCCeEEEEECCC-----
Q 004217 71 SQIFEAGRDARR-GLASWVEAESLHHLRP-KYC---PLSP--PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT----- 138 (767)
Q Consensus 71 s~~~vA~sd~g~-~LaSgs~DgsIrlWd~-~t~---~L~g--H~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~t----- 138 (767)
....+++..++. .|++++.|+.|++|++ ..+ .+.+ |...|.+++|+| +++|++++.|+.|++||+++
T Consensus 58 ~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~ 136 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGV 136 (342)
T ss_dssp CEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBC
T ss_pred ceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccccccccc
Confidence 466777888899 9999999999999999 776 4667 999999999999 99999999999999999987
Q ss_pred ----CeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCC-CeEE---EeecCCCCeEEEEEcC-CCCEEEEE
Q 004217 139 ----GSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST-AECI---GSRDFYRPIASIAFHA-SGELLAVA 209 (767)
Q Consensus 139 ----g~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~t-g~~i---~~l~h~~~VtsVafSP-dG~~LAsg 209 (767)
++++..+. |...|.+++|+| +. +++++.|+.|++||+++ +... ....+...+.+++|+| ++++|+++
T Consensus 137 ~~~~~~~~~~~~-~~~~v~~~~~~~-~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 137 IAVKNLNSNNTK-VKNKIFTMDTNS-SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp EEEEESCSSSSS-SCCCEEEEEECS-SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE
T ss_pred ccccCCeeeEEe-eCCceEEEEecC-Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEE
Confidence 66666666 889999999998 44 99999999999999998 5432 3345788999999999 99999999
Q ss_pred ECCc-EEEEEcCCC--cc-ccCCeEEecCCC---------CeEEEEEccCCCeEEEEEe
Q 004217 210 SGHK-LYIWRYNMR--EE-TSSPRIVLRTRR---------SLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 210 Sdd~-V~VWDl~t~--~~-~~~~~~l~~h~~---------~VtsVaFSPDG~~LlaSgs 255 (767)
+.++ |++||++.. .. ......+..|.. .|.+++|+|++++|++++.
T Consensus 213 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 271 (342)
T 1yfq_A 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS 271 (342)
T ss_dssp ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET
T ss_pred ecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC
Confidence 9766 999999876 10 012345666654 9999999999998877664
No 107
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.84 E-value=3.7e-19 Score=190.18 Aligned_cols=250 Identities=13% Similarity=0.171 Sum_probs=179.4
Q ss_pred CEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCeE-EEEeCCCeEEEEECCCCeEEEEEccCCCCcEEEE
Q 004217 82 RGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVR 156 (767)
Q Consensus 82 ~~LaSgs~DgsIrlWd~~t~~----L~gH~~sVtsVaFSpDG~~L-ASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLa 156 (767)
..+++++.|+.|++||..+++ +..| ..+.+++|+|++++| ++++.|++|++||+.+++.+..+..+. .+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 457788999999999998874 3344 459999999999987 677789999999999999998887665 899999
Q ss_pred EccCCCcEE-EEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEE-EEEECC-cEEEEEcCCCccccCCeEEec
Q 004217 157 FHPLNPTII-ASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELL-AVASGH-KLYIWRYNMREETSSPRIVLR 233 (767)
Q Consensus 157 fsP~dg~lL-aSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~L-AsgSdd-~V~VWDl~t~~~~~~~~~l~~ 233 (767)
|+| +++++ ++++.|+.|++||+.+++.+..+.+...+.+++|+|+|++| ++++.+ .|++||+.+++... .+.
T Consensus 81 ~sp-dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~---~~~- 155 (391)
T 1l0q_A 81 VSP-DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN---TVS- 155 (391)
T ss_dssp ECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE---EEE-
T ss_pred ECC-CCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE---EEe-
Confidence 999 66655 56667899999999999999888888889999999999977 455544 49999999887544 333
Q ss_pred CCCCeEEEEEccCCCeEEEEEe------eCCcCCCCcceeEeecC----------CCccC------CCCeEEEecCCCCC
Q 004217 234 TRRSLRAVHFHPHAAPLLLTAE------VNDLDSSESSLTLATSP----------GYWRY------PPPVICMAGAHSSS 291 (767)
Q Consensus 234 h~~~VtsVaFSPDG~~LlaSgs------vwdl~s~~~~~~l~t~s----------G~~~~------p~~~v~l~~~~Ssd 291 (767)
+...+.+++|+|+++++++++. +||++.......+.... |..-+ ....+.+|+...+.
T Consensus 156 ~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 156 VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 3466799999999998866643 77777654433222110 00000 12344445543332
Q ss_pred CCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeee
Q 004217 292 HPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVL 358 (767)
Q Consensus 292 ~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~ 358 (767)
....... ......+.|+||++++++.. +....+.+||..+++....+
T Consensus 236 ~~~~~~~----~~~~~~~~~s~dg~~l~~s~----------------~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 236 ITARIPV----GPDPAGIAVTPDGKKVYVAL----------------SFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp EEEEEEC----CSSEEEEEECTTSSEEEEEE----------------TTTTEEEEEETTTTEEEEEE
T ss_pred EEEEEec----CCCccEEEEccCCCEEEEEc----------------CCCCEEEEEECCCCcEEEEE
Confidence 2222111 11234688999999987621 22346889999988777666
No 108
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.84 E-value=1.1e-19 Score=200.08 Aligned_cols=184 Identities=15% Similarity=0.171 Sum_probs=150.9
Q ss_pred eEEEEEEcCCC-EEEEEeCCCeEEEEeCCCC-----------CCCCCCCCeEEEEECC-CCCeEEEEeCCCeEEEEECCC
Q 004217 72 QIFEAGRDARR-GLASWVEAESLHHLRPKYC-----------PLSPPPRSTIAAAFSP-DGKTLASTHGDHTVKIIDCQT 138 (767)
Q Consensus 72 ~~~vA~sd~g~-~LaSgs~DgsIrlWd~~t~-----------~L~gH~~sVtsVaFSp-DG~~LASgs~DGtVrVWDl~t 138 (767)
...+++...+. .|++++.|+.|++|++... .+.+|...|.+++|+| ++.+|++++.|+.|++||+++
T Consensus 184 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp CCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred eEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 45566666666 9999999999999999872 2558999999999999 788999999999999999998
Q ss_pred C---eEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCC-CeEEEee-cCCCCeEEEEEcCCCC-EEEEEECC
Q 004217 139 G---SCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST-AECIGSR-DFYRPIASIAFHASGE-LLAVASGH 212 (767)
Q Consensus 139 g---~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~t-g~~i~~l-~h~~~VtsVafSPdG~-~LAsgSdd 212 (767)
+ +.+..+..|...|.+++|+|.+..+|++|+.|++|++||+++ .+.+..+ .|...|.+++|+|+++ +|++++.+
T Consensus 264 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d 343 (430)
T 2xyi_A 264 NNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD 343 (430)
T ss_dssp SCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT
T ss_pred CCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC
Confidence 7 567788899999999999994445899999999999999998 4555555 4889999999999995 68888855
Q ss_pred c-EEEEEcCCCccc-----------cCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 213 K-LYIWRYNMREET-----------SSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 213 ~-V~VWDl~t~~~~-----------~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
+ |+|||+...... .......+|...|++++|+|++++++++++
T Consensus 344 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 344 RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE
T ss_pred CcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE
Confidence 5 999999873211 112345578889999999999996555554
No 109
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.84 E-value=1.4e-19 Score=189.01 Aligned_cols=182 Identities=13% Similarity=0.114 Sum_probs=148.1
Q ss_pred cceEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEE--CCCCCeEEEEeCCCeEEEEECCCCeEEEE
Q 004217 70 FSQIFEAGRDARRGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAF--SPDGKTLASTHGDHTVKIIDCQTGSCLKV 144 (767)
Q Consensus 70 ~s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~---L~gH~~sVtsVaF--SpDG~~LASgs~DGtVrVWDl~tg~~l~~ 144 (767)
.....+++..++..|++++.|+.|++||+.+++ +.+|...|.+++| ++++++|++++.|+.|++||+++++.+..
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEE
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE
Confidence 346777888899999999999999999998873 5689999999999 99999999999999999999998877666
Q ss_pred EccCC-----------------------------------------CCcEEEEEccCCCc----EEEEEeCCCeEEEEEC
Q 004217 145 LHGHR-----------------------------------------RTPWVVRFHPLNPT----IIASGSLDHEVRLWNA 179 (767)
Q Consensus 145 L~gH~-----------------------------------------~~V~sLafsP~dg~----lLaSgS~DGtVrIWDl 179 (767)
+..|. ..+.++.+.+ +.. .+++++.|+.|++||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 167 LQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFK-DKQNKPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp EECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEE-CTTSCEEEEEEEETTSEEEEEES
T ss_pred EecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcc-cCCCCCCeEEEecCCCcEEEEec
Confidence 65443 2233444443 222 3999999999999999
Q ss_pred CCC---eEEEeec-CCC------------CeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEE
Q 004217 180 STA---ECIGSRD-FYR------------PIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVH 242 (767)
Q Consensus 180 ~tg---~~i~~l~-h~~------------~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVa 242 (767)
+.. +.+..+. |.. .|.+++|+|++++|++++.++ |++||+++++.+. .+..|...|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~~v~~~~ 322 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK---TSEQLDQPISACC 322 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE---ECCCCSSCEEEEE
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE---EecCCCCCceEEE
Confidence 886 3333332 332 799999999999999999666 9999999887655 6678999999999
Q ss_pred EccCCCeEEEEEe
Q 004217 243 FHPHAAPLLLTAE 255 (767)
Q Consensus 243 FSPDG~~LlaSgs 255 (767)
|+|+|++|++++.
T Consensus 323 ~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 323 FNHNGNIFAYASS 335 (368)
T ss_dssp ECTTSSCEEEEEC
T ss_pred ECCCCCeEEEEec
Confidence 9999998887776
No 110
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.84 E-value=3.9e-19 Score=194.47 Aligned_cols=188 Identities=19% Similarity=0.290 Sum_probs=157.0
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC---------------------------------------------CCCCC
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC---------------------------------------------PLSPP 106 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~---------------------------------------------~L~gH 106 (767)
+.+++++.++..|++|+.|+.|++||+.++ .+.+|
T Consensus 150 V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h 229 (420)
T 4gga_A 150 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGH 229 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEeccc
Confidence 556777777888888888888888877542 13468
Q ss_pred CCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCe----EEEEEccCCCCcEEEEEccCCCcEEEEE--eCCCeEEEEECC
Q 004217 107 PRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS----CLKVLHGHRRTPWVVRFHPLNPTIIASG--SLDHEVRLWNAS 180 (767)
Q Consensus 107 ~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~----~l~~L~gH~~~V~sLafsP~dg~lLaSg--S~DGtVrIWDl~ 180 (767)
...+..+.|++++++|++++.|+.|+|||..+++ .+..+..|...|.+++|+|.+..+++++ +.|++|++||+.
T Consensus 230 ~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~ 309 (420)
T 4gga_A 230 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 309 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT
T ss_pred ccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC
Confidence 8888899999999999999999999999998764 3566788999999999999777787764 579999999999
Q ss_pred CCeEEEeecCCCCeEEEEEcCCCCEEEEEE--C-CcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe--
Q 004217 181 TAECIGSRDFYRPIASIAFHASGELLAVAS--G-HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-- 255 (767)
Q Consensus 181 tg~~i~~l~h~~~VtsVafSPdG~~LAsgS--d-d~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-- 255 (767)
++++...+.....+.++.|+|+++.+++++ . +.|+|||+.+++.+. .+.+|...|++++|+|||++|++++.
T Consensus 310 t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~---~l~gH~~~V~~l~~spdg~~l~S~s~D~ 386 (420)
T 4gga_A 310 SGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA---ELKGHTSRVLSLTMSPDGATVASAAADE 386 (420)
T ss_dssp TTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSSCEEEEETTT
T ss_pred ccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEE---EEcCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 999999998889999999999999888876 3 449999999988755 77899999999999999998887765
Q ss_pred ---eCCcCCC
Q 004217 256 ---VNDLDSS 262 (767)
Q Consensus 256 ---vwdl~s~ 262 (767)
+||+...
T Consensus 387 tvriWdv~~~ 396 (420)
T 4gga_A 387 TLRLWRCFEL 396 (420)
T ss_dssp EEEEECCSCS
T ss_pred eEEEEECCCC
Confidence 6776643
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.1e-19 Score=200.59 Aligned_cols=179 Identities=13% Similarity=0.049 Sum_probs=154.1
Q ss_pred ceEEEEEEcCCCEE-EEEeCCCeEEEEeCC--CCC----CC--CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeE
Q 004217 71 SQIFEAGRDARRGL-ASWVEAESLHHLRPK--YCP----LS--PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC 141 (767)
Q Consensus 71 s~~~vA~sd~g~~L-aSgs~DgsIrlWd~~--t~~----L~--gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~ 141 (767)
....++++.++..| ++++.|+.|++|++. .++ +. .|...|.+++|+|++++|++|+.|+.|++||+.+++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPE 183 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccc
Confidence 36678888899986 899999999999998 552 22 6778999999999999999999999999999988765
Q ss_pred EE----EEccCCCCcEEEEEccCC---CcEEEEEeCCCeEEEEECCCCeEEEe-e-cCCCCeEEEEEcCCCCEEEEEECC
Q 004217 142 LK----VLHGHRRTPWVVRFHPLN---PTIIASGSLDHEVRLWNASTAECIGS-R-DFYRPIASIAFHASGELLAVASGH 212 (767)
Q Consensus 142 l~----~L~gH~~~V~sLafsP~d---g~lLaSgS~DGtVrIWDl~tg~~i~~-l-~h~~~VtsVafSPdG~~LAsgSdd 212 (767)
.. .+.+|...|.+++|+| + +++|++++.|++|++||+++++++.. + .|...|.+++|+ ++++|++++.+
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d 261 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD 261 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS
T ss_pred ccccceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC
Confidence 43 7788999999999999 7 88999999999999999999988776 3 588999999999 99999999976
Q ss_pred c-EEEEEcCCCccccCCeEEe-------------------------cCCCCeEEEEEccCCCeEEEEE
Q 004217 213 K-LYIWRYNMREETSSPRIVL-------------------------RTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 213 ~-V~VWDl~t~~~~~~~~~l~-------------------------~h~~~VtsVaFSPDG~~LlaSg 254 (767)
+ |++||+++++.+. .+. .....|.+++|+|+++++++++
T Consensus 262 ~~v~vwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 262 DKIFAWDWKTGKNLS---TFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp SEEEEEETTTCCEEE---EEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred CeEEEEECCCCcEee---eecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 5 9999999887544 222 2345799999999999888877
No 112
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.83 E-value=1.7e-18 Score=189.90 Aligned_cols=237 Identities=15% Similarity=0.168 Sum_probs=181.7
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
...+.+. +..+++++.|+.|++||..++ .+.+|...|.+++|+ ++.|++|+.|++|++||+.+++.+..+.+
T Consensus 162 v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 237 (445)
T 2ovr_B 162 VWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMG 237 (445)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEEC
T ss_pred EEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcC
Confidence 3444443 679999999999999999886 477999999999995 67899999999999999999999999999
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccc
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREET 225 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~ 225 (767)
|...|.+++| +++++++++.|+.|++||+++++++..+. |...|.+++| +++++++++.++ |++||+++++..
T Consensus 238 ~~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 238 HVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp CSSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CcccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEE
Confidence 9999999999 56889999999999999999999988875 8889999999 788999999665 999999998865
Q ss_pred cCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCcceeEeecCCCccC---------------CCCeEEEe
Q 004217 226 SSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSESSLTLATSPGYWRY---------------PPPVICMA 285 (767)
Q Consensus 226 ~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~~~~l~t~sG~~~~---------------p~~~v~l~ 285 (767)
. .+..|...+.++.++ ++++++++. +||++.++....+....++... ....+.+|
T Consensus 313 ~---~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iw 387 (445)
T 2ovr_B 313 H---TLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 387 (445)
T ss_dssp E---EECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEE
T ss_pred E---EEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEE
Confidence 5 677898999988875 556666554 8888766654444432222110 12445566
Q ss_pred cCCCCCCCceee--ccCCCCCCceeeEEecCCCEEEEee
Q 004217 286 GAHSSSHPGLAE--EVPLITPPFLRPSFVRDDERISLQH 322 (767)
Q Consensus 286 ~~~Ssd~~~L~s--g~~~~slpil~psFSpDg~rIva~~ 322 (767)
+...+....... .......+++..+|+|++..+++..
T Consensus 388 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 388 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS 426 (445)
T ss_dssp ETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEEC
T ss_pred ECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcc
Confidence 655443322221 1112344566788999888877633
No 113
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.83 E-value=4.5e-19 Score=194.62 Aligned_cols=172 Identities=19% Similarity=0.206 Sum_probs=154.1
Q ss_pred EEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCc
Q 004217 77 GRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTP 152 (767)
Q Consensus 77 ~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V 152 (767)
...++..+++++.|+.|++||+.+. .+.+|...|.+++|+|++++|++|+.|+.|++||+++++++..+.+|...|
T Consensus 276 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v 355 (464)
T 3v7d_B 276 VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALV 355 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcE
Confidence 3567889999999999999999876 467899999999999999999999999999999999999999999999999
Q ss_pred EEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECCcEEEEEcCCCccccCCeEEe
Q 004217 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVL 232 (767)
Q Consensus 153 ~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t~~~~~~~~~l~ 232 (767)
.++.|++ +++++++.|++|++||+.+++......+...+..++|++++++|++++++.|++||+++++.+. ....
T Consensus 356 ~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~--~~~~ 430 (464)
T 3v7d_B 356 GLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVH--ANIL 430 (464)
T ss_dssp EEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEE--SCTT
T ss_pred EEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEe--hhhc
Confidence 9999964 8999999999999999999988888888888999999999999999998789999999988754 2245
Q ss_pred cCCCCeEEEEEccCCCeEEEEEe
Q 004217 233 RTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 233 ~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
.|...|.+++|+ ++.++++++
T Consensus 431 ~~~~~v~~v~~~--~~~l~~~~~ 451 (464)
T 3v7d_B 431 KDADQIWSVNFK--GKTLVAAVE 451 (464)
T ss_dssp TTCSEEEEEEEE--TTEEEEEEE
T ss_pred cCCCcEEEEEec--CCEEEEEEE
Confidence 688999999997 566776665
No 114
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.83 E-value=2e-19 Score=218.27 Aligned_cols=187 Identities=12% Similarity=0.087 Sum_probs=158.0
Q ss_pred ceEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 71 SQIFEAGRDARRGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 71 s~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
...+++++.++..|++++.|++|++|+....+ ...|...|.+++|+| |++|++++.|++|+|||+++++++..+.
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~- 96 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF- 96 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-
Confidence 47788999999999999999999999987763 235888999999999 8899999999999999999999998886
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEE-----------e-ecCCCCeEEEEEcCCC-CEEEEEECCc-
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIG-----------S-RDFYRPIASIAFHASG-ELLAVASGHK- 213 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~-----------~-l~h~~~VtsVafSPdG-~~LAsgSdd~- 213 (767)
|...|++++|+| +++++++|+.||+|++||++++++.. . ..|...|.+++|+|++ .+|++|++++
T Consensus 97 ~~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~ 175 (902)
T 2oaj_A 97 VPGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVT 175 (902)
T ss_dssp CSSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCE
T ss_pred CCCCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCc
Confidence 778999999999 99999999999999999999987641 1 2377899999999964 6888888766
Q ss_pred EEEEEcCCCccccCCeEEec------------------CCCCeEEEEEccCCCeEEEEEe-----eCCcCCCCc
Q 004217 214 LYIWRYNMREETSSPRIVLR------------------TRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSES 264 (767)
Q Consensus 214 V~VWDl~t~~~~~~~~~l~~------------------h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~~ 264 (767)
| +||+++++... .+.. |...|++++|+|||++|++++. +||++.++.
T Consensus 176 v-lWd~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 176 L-TYSLVENEIKQ---SFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp E-EEETTTTEEEE---EECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred E-EEECCCCceEE---EEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 8 99999887544 3332 3578999999999998777665 777776543
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.83 E-value=7.4e-19 Score=190.50 Aligned_cols=247 Identities=11% Similarity=0.064 Sum_probs=185.9
Q ss_pred EEEEEcCCCEEEEEeCCCeEEEEeCCCCC---------CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEE
Q 004217 74 FEAGRDARRGLASWVEAESLHHLRPKYCP---------LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV 144 (767)
Q Consensus 74 ~vA~sd~g~~LaSgs~DgsIrlWd~~t~~---------L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~ 144 (767)
.+++..++..++++..++.|++||..+++ +.+|...|.+++|+++++++++++.|+.|++||+++++.+..
T Consensus 127 ~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~ 206 (433)
T 3bws_A 127 SVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT 206 (433)
T ss_dssp CCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE
T ss_pred EEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEE
Confidence 45566666777788888999999998763 337888999999999999999999999999999999999999
Q ss_pred EccCCCCcEEEEEccCCCcEE-EEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEE---------CCcE
Q 004217 145 LHGHRRTPWVVRFHPLNPTII-ASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS---------GHKL 214 (767)
Q Consensus 145 L~gH~~~V~sLafsP~dg~lL-aSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgS---------dd~V 214 (767)
+..|...+.+++|+| +++.+ ++++.|+.|++||+++++.+..+.....+.+++|+|+|++|++++ ++.|
T Consensus 207 ~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i 285 (433)
T 3bws_A 207 VDLTGKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRL 285 (433)
T ss_dssp EECSSSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEE
T ss_pred EcCCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeE
Confidence 999999999999999 66655 566689999999999999998888777899999999999988887 2349
Q ss_pred EEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe------eCCcCCCCcceeEeecCCCccCCCCeEEEecCC
Q 004217 215 YIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLDSSESSLTLATSPGYWRYPPPVICMAGAH 288 (767)
Q Consensus 215 ~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs------vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~ 288 (767)
++||+++++... ...|...+.+++|+|+++++++++. +|++..++....
T Consensus 286 ~~~d~~~~~~~~----~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~--------------------- 340 (433)
T 3bws_A 286 GIYSMDKEKLID----TIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKS--------------------- 340 (433)
T ss_dssp EEEETTTTEEEE----EEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEE---------------------
T ss_pred EEEECCCCcEEe----eccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEE---------------------
Confidence 999999886544 3455668999999999998877653 444432111100
Q ss_pred CCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeeec
Q 004217 289 SSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVLS 359 (767)
Q Consensus 289 Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~~ 359 (767)
.. .......++|+||++.+++.......- ....-..++....+..||..+++....+.
T Consensus 341 -------~~----~~~~~~~~~~s~dg~~l~~~~~~~~~~--~~~~~~~g~~dg~v~~~d~~~~~~~~~~~ 398 (433)
T 3bws_A 341 -------IP----VFDKPNTIALSPDGKYLYVSCRGPNHP--TEGYLKKGLVLGKVYVIDTTTDTVKEFWE 398 (433)
T ss_dssp -------EE----CSSSEEEEEECTTSSEEEEEECCCCCT--TTCTTSCCSSCCEEEEEETTTTEEEEEEE
T ss_pred -------ec----CCCCCCeEEEcCCCCEEEEEecCCCcc--ccccccccccceEEEEEECCCCcEEEEec
Confidence 00 112344689999999998854432210 00111122334578999998888777664
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.3e-19 Score=211.47 Aligned_cols=191 Identities=13% Similarity=0.124 Sum_probs=158.7
Q ss_pred ceEEEEEEcC--CCEEEEEeCCCeEEEEeCCCC------CCCCCCCCeEEEEECCC--CCeEEEEeCCCeEEEEECCCCe
Q 004217 71 SQIFEAGRDA--RRGLASWVEAESLHHLRPKYC------PLSPPPRSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGS 140 (767)
Q Consensus 71 s~~~vA~sd~--g~~LaSgs~DgsIrlWd~~t~------~L~gH~~sVtsVaFSpD--G~~LASgs~DGtVrVWDl~tg~ 140 (767)
....+++..+ +..|++++.|+.|++||..++ .+.+|...|.+++|+|+ +++|++|+.||.|++||+.++.
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred ceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 3566777655 899999999999999999876 35689999999999999 9999999999999999998873
Q ss_pred --EEEEEccCCCCcEEEEEccC------------CCcEEEEEeCCCeEEEEECCCC----eEEEee-cCCCCeEEEEEcC
Q 004217 141 --CLKVLHGHRRTPWVVRFHPL------------NPTIIASGSLDHEVRLWNASTA----ECIGSR-DFYRPIASIAFHA 201 (767)
Q Consensus 141 --~l~~L~gH~~~V~sLafsP~------------dg~lLaSgS~DGtVrIWDl~tg----~~i~~l-~h~~~VtsVafSP 201 (767)
....+.+|...|.+++|+|. +++++++|+.||+|++||++++ .....+ .|...|.+++|+|
T Consensus 135 ~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp 214 (753)
T 3jro_A 135 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 214 (753)
T ss_dssp CCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred CcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEecc
Confidence 34567889999999999994 4789999999999999999887 334443 4889999999999
Q ss_pred C---CCEEEEEECCc-EEEEEcCCCcccc--CCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCC
Q 004217 202 S---GELLAVASGHK-LYIWRYNMREETS--SPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDS 261 (767)
Q Consensus 202 d---G~~LAsgSdd~-V~VWDl~t~~~~~--~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s 261 (767)
+ +++|++++.++ |++||++++.... .......|...|++++|+|+|+++++++. +|++..
T Consensus 215 ~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 215 TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 9 89999999666 9999998864221 11223458889999999999998887765 777764
No 117
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.8e-19 Score=218.69 Aligned_cols=163 Identities=8% Similarity=0.065 Sum_probs=137.6
Q ss_pred EEcCCCEEEEEeCCCeEEEEeCCCCCCC---------------CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCC--
Q 004217 77 GRDARRGLASWVEAESLHHLRPKYCPLS---------------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG-- 139 (767)
Q Consensus 77 ~sd~g~~LaSgs~DgsIrlWd~~t~~L~---------------gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg-- 139 (767)
++.++..|++++.|++|++||+.++.+. +|...|.+|+|+|||++||+|+.||+|+|||+.++
T Consensus 443 ~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~ 522 (902)
T 2oaj_A 443 PAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQF 522 (902)
T ss_dssp CCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC
T ss_pred ccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccc
Confidence 3456889999999999999999876432 78899999999999999999999999999999866
Q ss_pred -------------------------------------------eEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEE
Q 004217 140 -------------------------------------------SCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRL 176 (767)
Q Consensus 140 -------------------------------------------~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrI 176 (767)
+++..+.+|.+.|++++|+| ++ +|++|+.|++|+|
T Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp-dG-~lAsgs~D~tv~l 600 (902)
T 2oaj_A 523 YSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN-IG-FVGIAYAAGSLML 600 (902)
T ss_dssp ---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB-TS-EEEEEETTSEEEE
T ss_pred cCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC-Cc-EEEEEeCCCcEEE
Confidence 24678899999999999999 88 9999999999999
Q ss_pred EECCCCeEEEe-----e--cCCCCeEEEEEc-----CCC---CEEEEEECCc-EEEEEc---CCCccccCCeEEecC---
Q 004217 177 WNASTAECIGS-----R--DFYRPIASIAFH-----ASG---ELLAVASGHK-LYIWRY---NMREETSSPRIVLRT--- 234 (767)
Q Consensus 177 WDl~tg~~i~~-----l--~h~~~VtsVafS-----PdG---~~LAsgSdd~-V~VWDl---~t~~~~~~~~~l~~h--- 234 (767)
||++++..+.. + .|...|++++|+ ||| ++|++|+.|+ |++||+ .+++... .+.+|
T Consensus 601 wd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~---~~~~~~~~ 677 (902)
T 2oaj_A 601 IDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDV---QLMDITNV 677 (902)
T ss_dssp EETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEE---EEEEEEEC
T ss_pred EECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEE---EecCceec
Confidence 99998877542 2 578889999999 886 7999999766 999999 5555433 33343
Q ss_pred --CCCeEEEE-Ec
Q 004217 235 --RRSLRAVH-FH 244 (767)
Q Consensus 235 --~~~VtsVa-FS 244 (767)
.+.|.+++ |+
T Consensus 678 ~~~~~v~~i~~~~ 690 (902)
T 2oaj_A 678 TSKGPIHKIDAFS 690 (902)
T ss_dssp CSSCCCCEEEEEE
T ss_pred CCCCceEEEEeEe
Confidence 57787777 76
No 118
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.81 E-value=2.7e-18 Score=184.70 Aligned_cols=185 Identities=8% Similarity=-0.007 Sum_probs=145.2
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC--CCCCCCCeEEEEECCCCCeE-EEEeCCCeEEEEECCCCeEEEEEccC
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP--LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGH 148 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~--L~gH~~sVtsVaFSpDG~~L-ASgs~DGtVrVWDl~tg~~l~~L~gH 148 (767)
..+++++.++..|++++.+ .+++|+....+ ...+...+..+++.++++.+ ++++.|++|+|||+.+++++..+. |
T Consensus 22 V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~ 99 (355)
T 3vu4_A 22 VTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-V 99 (355)
T ss_dssp CCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-C
T ss_pred eEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-C
Confidence 5678888999999999866 47899987653 22233358889999988887 567788999999999999998887 6
Q ss_pred CCCcEEEEEccCCC-----------------------------------cEEEE--EeCCCeEEEEECCCCe--------
Q 004217 149 RRTPWVVRFHPLNP-----------------------------------TIIAS--GSLDHEVRLWNASTAE-------- 183 (767)
Q Consensus 149 ~~~V~sLafsP~dg-----------------------------------~lLaS--gS~DGtVrIWDl~tg~-------- 183 (767)
...|.++.|++ +. .+++. |+.||+|++||+.+++
T Consensus 100 ~~~v~~v~~~~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~ 178 (355)
T 3vu4_A 100 DAPVKDLFLSR-EFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQG 178 (355)
T ss_dssp SSCEEEEEECS-SEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC----------
T ss_pred CCceEEEEEcC-CEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCcccccccc
Confidence 67899999887 31 23333 5788999999998765
Q ss_pred --------EEEe-ecCCCCeEEEEEcCCCCEEEEEECC-c-EEEEEcCCCccccCCeEEe-c-CCCCeEEEEEccCCCeE
Q 004217 184 --------CIGS-RDFYRPIASIAFHASGELLAVASGH-K-LYIWRYNMREETSSPRIVL-R-TRRSLRAVHFHPHAAPL 250 (767)
Q Consensus 184 --------~i~~-l~h~~~VtsVafSPdG~~LAsgSdd-~-V~VWDl~t~~~~~~~~~l~-~-h~~~VtsVaFSPDG~~L 250 (767)
++.. ..|...|.+++|+|+|++|++++.| . |++||+++++.+. .+. + |...|++++|+|||++|
T Consensus 179 ~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~---~~~~g~h~~~v~~~~~s~~~~~l 255 (355)
T 3vu4_A 179 VQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVR---EFRRGLDRADVVDMKWSTDGSKL 255 (355)
T ss_dssp --------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEE---EEECTTCCSCEEEEEECTTSCEE
T ss_pred ccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE---EEEcCCCCCcEEEEEECCCCCEE
Confidence 1333 4589999999999999999999954 4 9999999988655 455 4 99999999999999988
Q ss_pred EEEEe-----eCCcCCC
Q 004217 251 LLTAE-----VNDLDSS 262 (767)
Q Consensus 251 laSgs-----vwdl~s~ 262 (767)
++++. +|++...
T Consensus 256 ~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 256 AVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEETTCEEEEEESSCC
T ss_pred EEEECCCEEEEEEccCC
Confidence 77665 7887653
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.81 E-value=2.7e-19 Score=195.06 Aligned_cols=173 Identities=15% Similarity=0.115 Sum_probs=126.5
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCC-CeEEEEeCCCeEEEEECCCCeEEEE----------
Q 004217 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDG-KTLASTHGDHTVKIIDCQTGSCLKV---------- 144 (767)
Q Consensus 80 ~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG-~~LASgs~DGtVrVWDl~tg~~l~~---------- 144 (767)
+++.|++++.|++|++||+.+. .+.+|...|.+++|+|++ .+|++++.|++|++||+.+++....
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 6889999999999999998765 356899999999999977 4899999999999999988754322
Q ss_pred ---------------EccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCe--------------
Q 004217 145 ---------------LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPI-------------- 194 (767)
Q Consensus 145 ---------------L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~V-------------- 194 (767)
..+|...|.++.|++.+++.+++++.|+++++||+.+++....+. +...+
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 314 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL 314 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECS
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc
Confidence 246788899999984489999999999999999998876544431 22222
Q ss_pred ----EEEEEcC-CCC-EEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 195 ----ASIAFHA-SGE-LLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 195 ----tsVafSP-dG~-~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
....|+| .+. ++++|+.++ |++||+.+++... ....|...|++|+|||||++|++++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~---~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 315 FPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS---IPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp SCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE---EEEECSSCEEEEEECTTSSEEEEEES
T ss_pred cCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE---EecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 2233444 233 566666555 9999999887644 66788899999999999998776653
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.81 E-value=6.4e-19 Score=202.77 Aligned_cols=181 Identities=15% Similarity=0.120 Sum_probs=136.8
Q ss_pred EEEEEEcCCCEEEEEeCCCeEE---------------------------EEeCCCC----CCC-CCCCCeEEEEECCCCC
Q 004217 73 IFEAGRDARRGLASWVEAESLH---------------------------HLRPKYC----PLS-PPPRSTIAAAFSPDGK 120 (767)
Q Consensus 73 ~~vA~sd~g~~LaSgs~DgsIr---------------------------lWd~~t~----~L~-gH~~sVtsVaFSpDG~ 120 (767)
..++++.+|+.+++++.|++|+ .|+..+. .+. .|...|.+++|||||+
T Consensus 19 ~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~ 98 (588)
T 2j04_A 19 NNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDD 98 (588)
T ss_dssp CCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSS
T ss_pred EEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCC
Confidence 3466667777777777777773 2333221 122 5688899999999999
Q ss_pred eEEEEeCCCeEEEEECCCCeEEEEEccCCC-----CcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeE-------EEee
Q 004217 121 TLASTHGDHTVKIIDCQTGSCLKVLHGHRR-----TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC-------IGSR 188 (767)
Q Consensus 121 ~LASgs~DGtVrVWDl~tg~~l~~L~gH~~-----~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~-------i~~l 188 (767)
+||+++.||+|+|||.++ ++..+. |.. .|.+++|+| ++++|++|+.||+|+|||+.++.. +..+
T Consensus 99 ~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti 174 (588)
T 2j04_A 99 WMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSI 174 (588)
T ss_dssp CEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEE
T ss_pred EEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeee
Confidence 999999999999999654 677777 665 599999999 999999999999999999998752 4443
Q ss_pred -----cCCCCeEEEEEcCCCCEEEEEE-CCcEEEEEcCCCccccCCeEE-ecCCCCeEEEEEccCCCeEEEEEe----eC
Q 004217 189 -----DFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIV-LRTRRSLRAVHFHPHAAPLLLTAE----VN 257 (767)
Q Consensus 189 -----~h~~~VtsVafSPdG~~LAsgS-dd~V~VWDl~t~~~~~~~~~l-~~h~~~VtsVaFSPDG~~LlaSgs----vw 257 (767)
+|...|.+++|+|+| +++++ |+.|++||+...........+ .+|...|.+++|+ |+.|++++. +|
T Consensus 175 ~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLW 250 (588)
T 2j04_A 175 RLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKI 250 (588)
T ss_dssp ECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEE
T ss_pred ecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEEE
Confidence 366799999999999 55555 555999999877632111234 3788999999999 576766654 66
Q ss_pred CcCC
Q 004217 258 DLDS 261 (767)
Q Consensus 258 dl~s 261 (767)
++..
T Consensus 251 d~~~ 254 (588)
T 2j04_A 251 DLKN 254 (588)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 6654
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.81 E-value=6.1e-19 Score=192.09 Aligned_cols=161 Identities=13% Similarity=0.071 Sum_probs=124.9
Q ss_pred CCCeEEEEeCCC-CC----CCCCCCCeEEEEECC---CCCeEEEEeCCCeEEEEECCCCeEEEEEccCC---CCcEEEEE
Q 004217 89 EAESLHHLRPKY-CP----LSPPPRSTIAAAFSP---DGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR---RTPWVVRF 157 (767)
Q Consensus 89 ~DgsIrlWd~~t-~~----L~gH~~sVtsVaFSp---DG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~---~~V~sLaf 157 (767)
.|+.|++|++.. ++ +.+|...++.++|++ |+.+|++++.|++|||||+++|+++++|.+|. ..+.+++|
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 488999999844 42 457888888888888 77999999999999999999999999998754 36778899
Q ss_pred ccCCCcEE------------EEEeCCCeEEEEECCCCeEEEee------cCCCCeEEEEEcCCCCEEEEEECCc-EEEEE
Q 004217 158 HPLNPTII------------ASGSLDHEVRLWNASTAECIGSR------DFYRPIASIAFHASGELLAVASGHK-LYIWR 218 (767)
Q Consensus 158 sP~dg~lL------------aSgS~DGtVrIWDl~tg~~i~~l------~h~~~VtsVafSPdG~~LAsgSdd~-V~VWD 218 (767)
+| ++.++ ++|+.|++|++||..+++++..+ +|...+.+..+ ++.++++++.|+ |+|||
T Consensus 235 Sp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWD 311 (356)
T 2w18_A 235 SE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWD 311 (356)
T ss_dssp EE-TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEE
T ss_pred CC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEE
Confidence 99 78776 67889999999999999987764 34444444444 488999999655 99999
Q ss_pred cCCCccccCCeEEecCCCCeE-EEEEccCCCeEEEEEe
Q 004217 219 YNMREETSSPRIVLRTRRSLR-AVHFHPHAAPLLLTAE 255 (767)
Q Consensus 219 l~t~~~~~~~~~l~~h~~~Vt-sVaFSPDG~~LlaSgs 255 (767)
+.+++.+. .+.+|...+. .++|+|||++|++++.
T Consensus 312 l~tGk~l~---tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 312 LLLGQCTA---LLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TTTCSEEE---EECCC--CCCCEEEECSSSSEEEEECT
T ss_pred CCCCcEEE---EecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 99998765 6777877655 6899999997776654
No 122
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.81 E-value=6e-18 Score=186.66 Aligned_cols=228 Identities=14% Similarity=0.101 Sum_probs=168.6
Q ss_pred CCEEEEEeCC------CeEEEEeCCCC---CCCCCCCCeEEEEECCCCCeEEEEeCCC---eEEEEECCCCeEEEEEccC
Q 004217 81 RRGLASWVEA------ESLHHLRPKYC---PLSPPPRSTIAAAFSPDGKTLASTHGDH---TVKIIDCQTGSCLKVLHGH 148 (767)
Q Consensus 81 g~~LaSgs~D------gsIrlWd~~t~---~L~gH~~sVtsVaFSpDG~~LASgs~DG---tVrVWDl~tg~~l~~L~gH 148 (767)
+..++..+.+ +.|++||.... .+.+|...|.+++|||||++|++++.|+ .|++||+.+++.. .+..|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~ 221 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASF 221 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecC
Confidence 4555555544 79999999764 3568999999999999999999999885 9999999998865 56778
Q ss_pred CCCcEEEEEccCCCcEEE-EEeCCCe--EEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEEC-C---cEEEEEcCC
Q 004217 149 RRTPWVVRFHPLNPTIIA-SGSLDHE--VRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG-H---KLYIWRYNM 221 (767)
Q Consensus 149 ~~~V~sLafsP~dg~lLa-SgS~DGt--VrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSd-d---~V~VWDl~t 221 (767)
...+.+++|+| +++.|+ +++.|+. |++||+.+++......+...+.+++|+|+|++|+++++ + .|++||+.+
T Consensus 222 ~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 222 PRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp SSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred CCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 88999999999 777666 7776654 99999999888666678889999999999999988885 3 388889887
Q ss_pred CccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCceeeccCC
Q 004217 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPL 301 (767)
Q Consensus 222 ~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgsvwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg~~~ 301 (767)
++. ..+..+...+.+++|+|||++|++++.... ...+.+++...+....+...
T Consensus 301 ~~~----~~l~~~~~~~~~~~~spdG~~l~~~~~~~g--------------------~~~i~~~d~~~~~~~~l~~~--- 353 (415)
T 2hqs_A 301 GAP----QRITWEGSQNQDADVSSDGKFMVMVSSNGG--------------------QQHIAKQDLATGGVQVLSST--- 353 (415)
T ss_dssp SCC----EECCCSSSEEEEEEECTTSSEEEEEEECSS--------------------CEEEEEEETTTCCEEECCCS---
T ss_pred CCE----EEEecCCCcccCeEECCCCCEEEEEECcCC--------------------ceEEEEEECCCCCEEEecCC---
Confidence 653 234556778999999999998887764210 02345555443332222111
Q ss_pred CCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCc
Q 004217 302 ITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQ 353 (767)
Q Consensus 302 ~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q 353 (767)
.....++|+|||+.|+....+. ....+..||..++.
T Consensus 354 --~~~~~~~~spdg~~l~~~s~~~--------------~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 354 --FLDETPSLAPNGTMVIYSSSQG--------------MGSVLNLVSTDGRF 389 (415)
T ss_dssp --SSCEEEEECTTSSEEEEEEEET--------------TEEEEEEEETTSCC
T ss_pred --CCcCCeEEcCCCCEEEEEEcCC--------------CccEEEEEECCCCc
Confidence 1455799999999998744321 12367788876443
No 123
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.80 E-value=6e-18 Score=185.63 Aligned_cols=169 Identities=20% Similarity=0.317 Sum_probs=146.7
Q ss_pred CCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEE---EEEccCCCCc
Q 004217 80 ARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCL---KVLHGHRRTP 152 (767)
Q Consensus 80 ~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l---~~L~gH~~~V 152 (767)
++..|++++.|+.|++||..++ .+.+|...|.+++|+ +.+|++|+.|+.|++||+.+++.+ ..+.+|...|
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v 259 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV 259 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcE
Confidence 7889999999999999999887 467899999999997 459999999999999999987654 6788999999
Q ss_pred EEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeE
Q 004217 153 WVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRI 230 (767)
Q Consensus 153 ~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~ 230 (767)
.+++| +++++++|+.|++|++||+++++++..+. |...|.+++| ++++|++|+.++ |++||+++++.+. .
T Consensus 260 ~~~~~---~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~---~ 331 (435)
T 1p22_A 260 NVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLR---V 331 (435)
T ss_dssp EEEEE---ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEE---E
T ss_pred EEEEe---CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEE---E
Confidence 99999 46899999999999999999999988865 8889999999 467999999665 9999999987655 6
Q ss_pred EecCCCCeEEEEEccCCCeEEEEEe-----eCCcC
Q 004217 231 VLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLD 260 (767)
Q Consensus 231 l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~ 260 (767)
+.+|...|.+++| ++.++++++. +||+.
T Consensus 332 ~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 332 LEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp ECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHH
T ss_pred EeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECC
Confidence 7789999999999 6776766654 55554
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.79 E-value=2.7e-17 Score=178.24 Aligned_cols=231 Identities=8% Similarity=0.029 Sum_probs=173.5
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCeEEE-EeCCCeEEEEECCCCeEEEEEc
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLAS-THGDHTVKIIDCQTGSCLKVLH 146 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~----L~gH~~sVtsVaFSpDG~~LAS-gs~DGtVrVWDl~tg~~l~~L~ 146 (767)
...+++..++..+++++.|+.|++||..+++ +..|...+.+++|+|++++|++ ++.|+.|++||+++++.+..+.
T Consensus 172 v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 251 (433)
T 3bws_A 172 VETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD 251 (433)
T ss_dssp EEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC
T ss_pred eeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec
Confidence 4456667788999999999999999998763 5578899999999999998854 4579999999999999888887
Q ss_pred cCCCCcEEEEEccCCCcEEEEEe--------CCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEE-EC-CcEEE
Q 004217 147 GHRRTPWVVRFHPLNPTIIASGS--------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVA-SG-HKLYI 216 (767)
Q Consensus 147 gH~~~V~sLafsP~dg~lLaSgS--------~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsg-Sd-d~V~V 216 (767)
.+ ..+.+++|+| +++++++++ .|+.|++||+.+++.+..+.+...+.+++|+|++++++++ +. +.|++
T Consensus 252 ~~-~~~~~~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v 329 (433)
T 3bws_A 252 KI-GLPRGLLLSK-DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEV 329 (433)
T ss_dssp CC-SEEEEEEECT-TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEE
T ss_pred CC-CCceEEEEcC-CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 54 4589999999 888888877 5889999999999988888777789999999999866554 44 44999
Q ss_pred EEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCcee
Q 004217 217 WRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLA 296 (767)
Q Consensus 217 WDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgsvwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~ 296 (767)
||+.+++... ...+...+.+++|+|+|+++++++...+...... ...|. ....+.+|+..........
T Consensus 330 ~d~~~~~~~~----~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~-----~~~g~---~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 330 YDLKEKKVQK----SIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGY-----LKKGL---VLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp EETTTTEEEE----EEECSSSEEEEEECTTSSEEEEEECCCCCTTTCT-----TSCCS---SCCEEEEEETTTTEEEEEE
T ss_pred EECCCCcEEE----EecCCCCCCeEEEcCCCCEEEEEecCCCcccccc-----ccccc---cceEEEEEECCCCcEEEEe
Confidence 9999876544 3347788999999999998877765322110000 00111 1245677775544333322
Q ss_pred eccCCCCCCceeeEEecCCCEEEE
Q 004217 297 EEVPLITPPFLRPSFVRDDERISL 320 (767)
Q Consensus 297 sg~~~~slpil~psFSpDg~rIva 320 (767)
.. ......++|+||++++++
T Consensus 398 ~~----~~~~~~~~~s~dg~~l~~ 417 (433)
T 3bws_A 398 EA----GNQPTGLDVSPDNRYLVI 417 (433)
T ss_dssp EC----SSSEEEEEECTTSCEEEE
T ss_pred cC----CCCCceEEEcCCCCEEEE
Confidence 22 223457899999999987
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.78 E-value=5e-18 Score=182.56 Aligned_cols=175 Identities=11% Similarity=0.066 Sum_probs=130.7
Q ss_pred cCCCEE-EEEeCCCeEEEEeCCCCCC---CCCCCCeEEEEECCCC-----------------------------------
Q 004217 79 DARRGL-ASWVEAESLHHLRPKYCPL---SPPPRSTIAAAFSPDG----------------------------------- 119 (767)
Q Consensus 79 d~g~~L-aSgs~DgsIrlWd~~t~~L---~gH~~sVtsVaFSpDG----------------------------------- 119 (767)
.....+ ++++.|++|++||..+++. ..|...|.+++|+++.
T Consensus 68 ~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~ 147 (355)
T 3vu4_A 68 HRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSN 147 (355)
T ss_dssp TTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEET
T ss_pred CCCCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEc
Confidence 334444 4566677888888776521 1355577777776642
Q ss_pred CeEEE--EeCCCeEEEEECCCCe----------------EEEEEccCCCCcEEEEEccCCCcEEEEEeCCCe-EEEEECC
Q 004217 120 KTLAS--THGDHTVKIIDCQTGS----------------CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHE-VRLWNAS 180 (767)
Q Consensus 120 ~~LAS--gs~DGtVrVWDl~tg~----------------~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGt-VrIWDl~ 180 (767)
++++. |+.||.|++||+.+++ ++..+.+|...|.+++|+| ++++|++|+.|++ |++||++
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~ 226 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTE 226 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETT
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECC
Confidence 34444 4778999999998765 2678899999999999999 9999999999998 9999999
Q ss_pred CCeEEEeec---CCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEE---------------------ecCC
Q 004217 181 TAECIGSRD---FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIV---------------------LRTR 235 (767)
Q Consensus 181 tg~~i~~l~---h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l---------------------~~h~ 235 (767)
+++++..+. |...|.+++|+|+|++|++++.|+ |++||++...... ...+ ....
T Consensus 227 ~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (355)
T 3vu4_A 227 DGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNK-RHALKGWINMKYFQSEWSLCNFKLSVDKH 305 (355)
T ss_dssp TCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCC-SEETTTTEECCCCCCSSCSEEEECCCCTT
T ss_pred CCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcc-cccccceeeccccccccceeEEEeccCCC
Confidence 999998875 899999999999999999999766 9999998654211 0000 0112
Q ss_pred CCeEEEEEccCCCeEEEEEe
Q 004217 236 RSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 236 ~~VtsVaFSPDG~~LlaSgs 255 (767)
.....++|++|++++++.+.
T Consensus 306 ~~~~~~a~~~d~~~l~~~~~ 325 (355)
T 3vu4_A 306 VRGCKIAWISESSLVVVWPH 325 (355)
T ss_dssp CCCCEEEESSSSEEEEEETT
T ss_pred CCceEEEEeCCCCEEEEEeC
Confidence 23467999999997777654
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.76 E-value=1.1e-16 Score=171.11 Aligned_cols=190 Identities=16% Similarity=0.187 Sum_probs=153.1
Q ss_pred ceEEEEEEcCCCEEE-EEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCeE-EEEeCCCeEEEEECCCCeEEEEE
Q 004217 71 SQIFEAGRDARRGLA-SWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVL 145 (767)
Q Consensus 71 s~~~vA~sd~g~~La-Sgs~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~L-ASgs~DGtVrVWDl~tg~~l~~L 145 (767)
....++++.++..|+ ++..++.|++||..+++ ...+...+.+++|+||+++| ++++.|+.|++||+.+++.+..+
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 154 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV 154 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 466777888888775 55577999999998873 22345678999999999987 68888999999999999998888
Q ss_pred ccCCCCcEEEEEccCCCcEE-EEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEE---C-CcEEEEEcC
Q 004217 146 HGHRRTPWVVRFHPLNPTII-ASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS---G-HKLYIWRYN 220 (767)
Q Consensus 146 ~gH~~~V~sLafsP~dg~lL-aSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgS---d-d~V~VWDl~ 220 (767)
..| ..+..++|+| +++.+ ++++.|+.|++||+++++.+..+.+...+.+++|+|+|++|++++ . +.|++||++
T Consensus 155 ~~~-~~~~~~~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 155 SVG-RSPKGIAVTP-DGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp ECC-SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred ecC-CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 765 4579999999 66655 788899999999999999998888888999999999999888887 3 449999999
Q ss_pred CCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe------eCCcCCCCcce
Q 004217 221 MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLDSSESSL 266 (767)
Q Consensus 221 t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs------vwdl~s~~~~~ 266 (767)
+++.+. .+..| ..+.+++|+|+++++++++. +||+..++...
T Consensus 233 ~~~~~~---~~~~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 233 TNKITA---RIPVG-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp TTEEEE---EEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCeEEE---EEecC-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEE
Confidence 887544 34444 46899999999998876653 77777554433
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.74 E-value=3.8e-17 Score=178.03 Aligned_cols=140 Identities=11% Similarity=0.130 Sum_probs=112.7
Q ss_pred EcCCCEEEEEeCCCeEEEEeCCCCC----CCCC---CCCeEEEEECCCCCeE------------EEEeCCCeEEEEECCC
Q 004217 78 RDARRGLASWVEAESLHHLRPKYCP----LSPP---PRSTIAAAFSPDGKTL------------ASTHGDHTVKIIDCQT 138 (767)
Q Consensus 78 sd~g~~LaSgs~DgsIrlWd~~t~~----L~gH---~~sVtsVaFSpDG~~L------------ASgs~DGtVrVWDl~t 138 (767)
..++..|++++.|++|++||+++++ +.+| ...+.+++|+|||+++ ++|+.|++|++||..+
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 4478999999999999999999884 4444 3478889999999986 5688899999999999
Q ss_pred CeEEEEE-----ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCe-EEEEEcCCCCEEEEEEC
Q 004217 139 GSCLKVL-----HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPI-ASIAFHASGELLAVASG 211 (767)
Q Consensus 139 g~~l~~L-----~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~V-tsVafSPdG~~LAsgSd 211 (767)
++.+..+ .+|...+.+..+ ++.++++++.|++|+|||+.+++++.++. |...+ .+++|+|||++|++|+.
T Consensus 270 gk~l~v~~~~~p~Gh~~~~lsg~~---sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 270 TLSVGVMLYCLPPGQAGRFLEGDV---KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TEEEEEEEECCCTTCCCCEEEEEE---ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT
T ss_pred CEEEEEEEeeccCCCcceeEcccc---CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 9988766 477766554444 46899999999999999999999999986 65554 46899999999999997
Q ss_pred Cc-EEEEEcC
Q 004217 212 HK-LYIWRYN 220 (767)
Q Consensus 212 d~-V~VWDl~ 220 (767)
|+ |+|||+.
T Consensus 347 D~TIklWd~~ 356 (356)
T 2w18_A 347 DGNIFVYHYS 356 (356)
T ss_dssp TSCEEEEEEC
T ss_pred CCcEEEecCC
Confidence 76 9999963
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.73 E-value=4.3e-16 Score=171.78 Aligned_cols=177 Identities=15% Similarity=0.097 Sum_probs=144.5
Q ss_pred eEEEEEEcCCCEEEEEeCCC---eEEEEeCCCCC---CCCCCCCeEEEEECCCCCeEE-EEeCCC--eEEEEECCCCeEE
Q 004217 72 QIFEAGRDARRGLASWVEAE---SLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLA-STHGDH--TVKIIDCQTGSCL 142 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~Dg---sIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~LA-Sgs~DG--tVrVWDl~tg~~l 142 (767)
....+++.+++.|+.++.++ .|++||+.+++ +..|...+.+++|+|||++|+ +++.|+ .|++||+.+++.
T Consensus 181 v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~- 259 (415)
T 2hqs_A 181 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI- 259 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-
T ss_pred ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-
Confidence 56677888999999999875 99999998773 567888999999999999888 666555 499999998875
Q ss_pred EEEccCCCCcEEEEEccCCCcEEEEEeC-CC--eEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECC----cEE
Q 004217 143 KVLHGHRRTPWVVRFHPLNPTIIASGSL-DH--EVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH----KLY 215 (767)
Q Consensus 143 ~~L~gH~~~V~sLafsP~dg~lLaSgS~-DG--tVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd----~V~ 215 (767)
..+..|...+.+++|+| +++.|++++. ++ .|.+||+.+++......+...+.+++|+|+|++|++++.+ .|+
T Consensus 260 ~~l~~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~ 338 (415)
T 2hqs_A 260 RQVTDGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIA 338 (415)
T ss_dssp EECCCCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEE
T ss_pred EeCcCCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEE
Confidence 67778889999999999 8888887776 44 6888899988765555567788999999999999888742 399
Q ss_pred EEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 216 IWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 216 VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
+||+.+++.. .+..+. .+.+++|+|||++|++++.
T Consensus 339 ~~d~~~~~~~----~l~~~~-~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 339 KQDLATGGVQ----VLSSTF-LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp EEETTTCCEE----ECCCSS-SCEEEEECTTSSEEEEEEE
T ss_pred EEECCCCCEE----EecCCC-CcCCeEEcCCCCEEEEEEc
Confidence 9999987652 234443 8999999999998887764
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.73 E-value=3e-17 Score=182.94 Aligned_cols=178 Identities=15% Similarity=0.108 Sum_probs=140.1
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC-----------C--------CCCCCCCeEEEEECCCCCeEE----EEeCC
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC-----------P--------LSPPPRSTIAAAFSPDGKTLA----STHGD 128 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~-----------~--------L~gH~~sVtsVaFSpDG~~LA----Sgs~D 128 (767)
..+++++..+..++.++.++ +++|+.... . ...|...|.+++|+|||++|+ +|+.|
T Consensus 39 ~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d 117 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYG 117 (434)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTE
T ss_pred ccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCC
Confidence 44567778889999998887 888764311 0 113556799999999999999 78889
Q ss_pred CeEEEEECCCC--------e---EEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe-ecCCCCeEE
Q 004217 129 HTVKIIDCQTG--------S---CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-RDFYRPIAS 196 (767)
Q Consensus 129 GtVrVWDl~tg--------~---~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~-l~h~~~Vts 196 (767)
++|+|||+.++ + .+..+.+|...|.+++|+|.++++|++++.|++|++||++++..+.. ..|...|.+
T Consensus 118 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~ 197 (434)
T 2oit_A 118 SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTS 197 (434)
T ss_dssp EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEE
T ss_pred ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeE
Confidence 99999998654 2 24566789999999999995589999999999999999999876544 457889999
Q ss_pred EEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEEec-------CCCCeEEEEEccCCCeEEEEE
Q 004217 197 IAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVLR-------TRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 197 VafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~-------h~~~VtsVaFSPDG~~LlaSg 254 (767)
++|+|+|++|++|+.++ |++||++ ++... .+.. |...|.+++|++++.++++.+
T Consensus 198 v~wspdg~~lasgs~dg~v~iwd~~-~~~~~---~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 198 VCWSPKGKQLAVGKQNGTVVQYLPT-LQEKK---VIPCPPFYESDHPVRVLDVLWIGTYVFAIVYA 259 (434)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTT-CCEEE---EECCCTTCCTTSCEEEEEEEEEETTEEEEEEE
T ss_pred EEEcCCCCEEEEEcCCCcEEEEccC-Ccccc---cccCCcccCCCCceeEEEEEEecCceEEEEEc
Confidence 99999999999999765 9999998 33222 1222 334899999999988766554
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.71 E-value=2.3e-15 Score=157.04 Aligned_cols=175 Identities=9% Similarity=0.068 Sum_probs=134.4
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCeEEEEeC-CCeEEEEECCCCeE-EEEEccCCCCc
Q 004217 79 DARRGLASWVEAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTGSC-LKVLHGHRRTP 152 (767)
Q Consensus 79 d~g~~LaSgs~DgsIrlWd~~t~~L----~gH~~sVtsVaFSpDG~~LASgs~-DGtVrVWDl~tg~~-l~~L~gH~~~V 152 (767)
+.+..+++...++.|.+||..++++ ..+...+ .++|+|||++|++++. ++.|++||+.+++. ...+..+....
T Consensus 8 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 86 (331)
T 3u4y_A 8 TSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM 86 (331)
T ss_dssp CCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC
T ss_pred CCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc
Confidence 3455577788899999999988742 3445556 9999999997776665 88999999999987 77777776666
Q ss_pred EEEEEccCCCcEEEEEeCCC---eEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEE--CCc-EEEEEcCCCcccc
Q 004217 153 WVVRFHPLNPTIIASGSLDH---EVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS--GHK-LYIWRYNMREETS 226 (767)
Q Consensus 153 ~sLafsP~dg~lLaSgS~DG---tVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgS--dd~-V~VWDl~t~~~~~ 226 (767)
.+++|+| ++++++++..++ .|.+||+.+++.+..+.......+++|+|+|++|++++ ++. |.+|++.......
T Consensus 87 ~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 87 ADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp CCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 6599999 888888555553 89999999999988888777889999999998665554 367 9999998654322
Q ss_pred CC-eEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 227 SP-RIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 227 ~~-~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
.. .........+..++|+|||+++++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 195 (331)
T 3u4y_A 166 DTGQEFISGGTRPFNITFTPDGNFAFVANL 195 (331)
T ss_dssp EEEEEEECSSSSEEEEEECTTSSEEEEEET
T ss_pred ecCCccccCCCCccceEECCCCCEEEEEeC
Confidence 11 122344566899999999998777653
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.71 E-value=2.9e-15 Score=171.99 Aligned_cols=271 Identities=11% Similarity=0.054 Sum_probs=193.0
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeC--CCCC----CCCCCCCeEEEEECC----CCCeEEEEeC-CCeEEEEECCCCe
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRP--KYCP----LSPPPRSTIAAAFSP----DGKTLASTHG-DHTVKIIDCQTGS 140 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~--~t~~----L~gH~~sVtsVaFSp----DG~~LASgs~-DGtVrVWDl~tg~ 140 (767)
.-.++++.+++.|++++.|++|++||+ .+.+ +. +...+..++|+| ||++|++++. +++|.|||..+++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 556778899999999999999999999 6652 22 455689999999 9999999885 8999999999999
Q ss_pred EEEEEccC----------CC-CcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEE--eecCCCCeEEEEEcCCCCEEE
Q 004217 141 CLKVLHGH----------RR-TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIG--SRDFYRPIASIAFHASGELLA 207 (767)
Q Consensus 141 ~l~~L~gH----------~~-~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~--~l~h~~~VtsVafSPdG~~LA 207 (767)
++..+..+ .. .+..+.++|++..++++...+++|.+||+.+.+.+. .+.+...+..++|+|+|++|+
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~ 339 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFM 339 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEE
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEE
Confidence 99888642 23 788999999667788888899999999999876544 456677788999999999887
Q ss_pred EEE--CCcEEEEEcCCCccccCCeEEe----cCCCCeEEEEEccCCCeEEEEEe-------eCCcCC-------CCccee
Q 004217 208 VAS--GHKLYIWRYNMREETSSPRIVL----RTRRSLRAVHFHPHAAPLLLTAE-------VNDLDS-------SESSLT 267 (767)
Q Consensus 208 sgS--dd~V~VWDl~t~~~~~~~~~l~----~h~~~VtsVaFSPDG~~LlaSgs-------vwdl~s-------~~~~~~ 267 (767)
+++ ++.|.+||+.+++... .+. .|......+ ++|++..+++++. +|+++. ++....
T Consensus 340 va~~~~~~v~v~D~~tg~l~~---~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 340 TAANNSNKVAVIDSKDRRLSA---LVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp EEEGGGTEEEEEETTTTEEEE---EEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred EEecCCCeEEEEECCCCeEEE---eeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEE
Confidence 776 4569999999987654 232 254444343 5788555555542 788877 555555
Q ss_pred EeecCCC---ccC-C-----------------CCeEEEecCCCCCCC-cee-e----ccCCCCCCceeeEEecCCCEEEE
Q 004217 268 LATSPGY---WRY-P-----------------PPVICMAGAHSSSHP-GLA-E----EVPLITPPFLRPSFVRDDERISL 320 (767)
Q Consensus 268 l~t~sG~---~~~-p-----------------~~~v~l~~~~Ssd~~-~L~-s----g~~~~slpil~psFSpDg~rIva 320 (767)
+....+. +.+ | ...+.+++..+.+.. ... . +.+......+.+.|++||+.+++
T Consensus 416 l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~ 495 (543)
T 1nir_A 416 LQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWF 495 (543)
T ss_dssp EECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEE
T ss_pred EEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEE
Confidence 5543222 111 1 125666666555443 211 1 12233456668999999999997
Q ss_pred eecCCCCCCcccccccccCCceeeeeccCCCCceeeeec
Q 004217 321 QHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVLS 359 (767)
Q Consensus 321 ~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~~ 359 (767)
.-- + ..+....+..||..+++....|.
T Consensus 496 s~~---------~---~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 496 SVW---------N---GKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp EEE---------C---CTTSCCEEEEEETTTTEEEEEEC
T ss_pred Eee---------c---CCCCCCeEEEEECCCceEEEeec
Confidence 110 0 01123467789999999999885
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=3e-15 Score=150.69 Aligned_cols=235 Identities=10% Similarity=0.041 Sum_probs=159.7
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCC-CC----CCCC-CCCeEEEEECCCCCeEEEEeC--CC--eEEEEECCCCeE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKY-CP----LSPP-PRSTIAAAFSPDGKTLASTHG--DH--TVKIIDCQTGSC 141 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t-~~----L~gH-~~sVtsVaFSpDG~~LASgs~--DG--tVrVWDl~tg~~ 141 (767)
...++++.++..|+++. ++.|++||..+ ++ +..| ...+.+++|+|||++|++++. ++ .|.+||..+++
T Consensus 44 v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~- 121 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT- 121 (297)
T ss_dssp CEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-
T ss_pred eEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-
Confidence 55677888999999886 78999999988 63 2344 367899999999999999983 34 45555555555
Q ss_pred EEEEccCCCCcEEEEEccCCCcEEE-EEeCCCeEEEEEC--CCCeEEEeecCCCCeEEEEEcCCCCEEEEEEC--CcEEE
Q 004217 142 LKVLHGHRRTPWVVRFHPLNPTIIA-SGSLDHEVRLWNA--STAECIGSRDFYRPIASIAFHASGELLAVASG--HKLYI 216 (767)
Q Consensus 142 l~~L~gH~~~V~sLafsP~dg~lLa-SgS~DGtVrIWDl--~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSd--d~V~V 216 (767)
...+..+. .+..++|+| +++.|+ ++..|+.++||++ .+++......+...+.+++|+|+|++|++++. +.+++
T Consensus 122 ~~~~~~~~-~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i 199 (297)
T 2ojh_A 122 PRLMTKNL-PSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQI 199 (297)
T ss_dssp CEECCSSS-SEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred eEEeecCC-CccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccE
Confidence 44454443 488999999 777655 7889999999985 45555555667788999999999998887763 44888
Q ss_pred EEcCC-CccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCce
Q 004217 217 WRYNM-REETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGL 295 (767)
Q Consensus 217 WDl~t-~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgsvwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L 295 (767)
|+++. .... ..+..|...+..++|+|+|++|++++......... .+....+.+++...+....+
T Consensus 200 ~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~------------~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 200 WRVRVDGSSV---ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHP------------RDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp EEEETTSSCE---EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCC------------SSEEEEEEEEETTSCSCEEE
T ss_pred EEECCCCCCc---EEEecCCcccCCeEECCCCCEEEEEEcCCCCCccc------------ccCceEEEEEecCCCCceee
Confidence 88863 3322 34566777899999999999888776532211000 00112355555444333222
Q ss_pred eeccCCCCCCceeeEEecCCCEEEEeecCCC
Q 004217 296 AEEVPLITPPFLRPSFVRDDERISLQHTEHD 326 (767)
Q Consensus 296 ~sg~~~~slpil~psFSpDg~rIva~~~~~d 326 (767)
... ......+..++|+||+++|++...+..
T Consensus 265 ~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 265 FDL-FGGQGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp EEE-EESTTTSCSCCBCTTSSEEEEEEECCC
T ss_pred ecc-CCCCcccccceECCCCCEEEEEEeccC
Confidence 221 112234556899999999998666543
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=1.5e-15 Score=152.97 Aligned_cols=231 Identities=11% Similarity=0.045 Sum_probs=157.3
Q ss_pred EeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCC-CeEEEEEccCC-CCcEEEEEccCC
Q 004217 87 WVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT-GSCLKVLHGHR-RTPWVVRFHPLN 161 (767)
Q Consensus 87 gs~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~t-g~~l~~L~gH~-~~V~sLafsP~d 161 (767)
.+.++.|++||..+++ +..|...|.+++|+|||++|++++ ++.|++||+.+ ++....+.+|. ..+.+++|+| +
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-d 95 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP-D 95 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT-T
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC-C
Confidence 4578899999998773 567889999999999999999987 78999999999 88776666663 6788999999 8
Q ss_pred CcEEEEEe--CCCeEEE--EECCCCeEEEeecCCCCeEEEEEcCCCCEEE-EEE-CCcEEEEEcCCCccccCCeEEecCC
Q 004217 162 PTIIASGS--LDHEVRL--WNASTAECIGSRDFYRPIASIAFHASGELLA-VAS-GHKLYIWRYNMREETSSPRIVLRTR 235 (767)
Q Consensus 162 g~lLaSgS--~DGtVrI--WDl~tg~~i~~l~h~~~VtsVafSPdG~~LA-sgS-dd~V~VWDl~t~~~~~~~~~l~~h~ 235 (767)
+++|++++ .++.++| ||+.+++. ..+.....+..++|+|+|++|+ ++. ++.++||+++.... ....+..+.
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~ 172 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG--VETRLTHGE 172 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCCC-EECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC--CEEECCCSS
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCce-EEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCC--cceEcccCC
Confidence 89999988 3344455 45555553 3444445589999999999877 454 45588888653321 123456677
Q ss_pred CCeEEEEEccCCCeEEEEEe------eCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCceeeccCCCCCCceee
Q 004217 236 RSLRAVHFHPHAAPLLLTAE------VNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRP 309 (767)
Q Consensus 236 ~~VtsVaFSPDG~~LlaSgs------vwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~p 309 (767)
..+.+++|+|+|+++++++. +|+++.. . ....... .....+..+
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~--------------------------~-~~~~~~~---~~~~~~~~~ 222 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD--------------------------G-SSVERIT---DSAYGDWFP 222 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETT--------------------------S-SCEEECC---CCSEEEEEE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCC--------------------------C-CCcEEEe---cCCcccCCe
Confidence 88999999999998887764 2222210 0 0000000 011233468
Q ss_pred EEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeee
Q 004217 310 SFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVL 358 (767)
Q Consensus 310 sFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~ 358 (767)
.|+||+++|++...+.... ..+......+..||..+++.....
T Consensus 223 ~~s~dg~~l~~~~~~~~~~------~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 223 HPSPSGDKVVFVSYDADVF------DHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EECTTSSEEEEEEEETTCC------SCCSSEEEEEEEEETTSCSCEEEE
T ss_pred EECCCCCEEEEEEcCCCCC------cccccCceEEEEEecCCCCceeee
Confidence 9999999998854432210 011123457889999887765554
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.69 E-value=9.2e-15 Score=152.94 Aligned_cols=240 Identities=10% Similarity=0.034 Sum_probs=168.7
Q ss_pred eEEEEEEcCCCEEEEEeC-------CCeEEEEeCCCCCCC---CCCCCeEEEEECCCCCeEEEE-eCCCeEEEEECCCCe
Q 004217 72 QIFEAGRDARRGLASWVE-------AESLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGS 140 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~-------DgsIrlWd~~t~~L~---gH~~sVtsVaFSpDG~~LASg-s~DGtVrVWDl~tg~ 140 (767)
...++++.+++.++..+. ++.|.+||..+++.. .....+..++|++||++++.+ ..++.|.+||.++++
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 122 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGE 122 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCe
Confidence 556777888888887774 568999999877422 223457889999999966554 557999999999999
Q ss_pred EEEEEccCCCC---------cEEEEEccCCCcEEEEEe--CCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEE
Q 004217 141 CLKVLHGHRRT---------PWVVRFHPLNPTIIASGS--LDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAV 208 (767)
Q Consensus 141 ~l~~L~gH~~~---------V~sLafsP~dg~lLaSgS--~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAs 208 (767)
.+..+..+... +..+.|+| ++++++.++ .++.|.+||..+++.+..+. +...+..++|+|+|++|++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 201 (353)
T 3vgz_A 123 VKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYT 201 (353)
T ss_dssp EEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEE
T ss_pred eEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEE
Confidence 88888765432 68899999 777655554 58899999999999998887 6666889999999999988
Q ss_pred EECCc-EEEEEcCCCccccCCeEEe----cCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCCccCCCCeEE
Q 004217 209 ASGHK-LYIWRYNMREETSSPRIVL----RTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVIC 283 (767)
Q Consensus 209 gSdd~-V~VWDl~t~~~~~~~~~l~----~h~~~VtsVaFSPDG~~LlaSgsvwdl~s~~~~~~l~t~sG~~~~p~~~v~ 283 (767)
++.++ |.+||+.+++... ... ++...+..++|+|||++++++.... ..+.
T Consensus 202 ~~~~~~i~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----------------------~~v~ 256 (353)
T 3vgz_A 202 TNADGELITIDTADNKILS---RKKLLDDGKEHFFINISLDTARQRAFITDSKA----------------------AEVL 256 (353)
T ss_dssp ECTTSEEEEEETTTTEEEE---EEECCCSSSCCCEEEEEEETTTTEEEEEESSS----------------------SEEE
T ss_pred EcCCCeEEEEECCCCeEEE---EEEcCCCCCCcccceEEECCCCCEEEEEeCCC----------------------CEEE
Confidence 88554 9999999887654 222 2455688999999999887765310 1122
Q ss_pred EecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeee
Q 004217 284 MAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVL 358 (767)
Q Consensus 284 l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~ 358 (767)
+++...+........ ..+ ..+.|+||++++++... ....+..||..+++....+
T Consensus 257 ~~d~~~~~~~~~~~~----~~~-~~~~~s~dg~~l~v~~~----------------~~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 257 VVDTRNGNILAKVAA----PES-LAVLFNPARNEAYVTHR----------------QAGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp EEETTTCCEEEEEEC----SSC-CCEEEETTTTEEEEEET----------------TTTEEEEEETTTTEEEEEE
T ss_pred EEECCCCcEEEEEEc----CCC-ceEEECCCCCEEEEEEC----------------CCCeEEEEECCCCeEEEEE
Confidence 222211111100000 001 24789999998887221 1235778888887776666
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.68 E-value=8e-15 Score=168.29 Aligned_cols=264 Identities=12% Similarity=0.044 Sum_probs=180.1
Q ss_pred EEcCCCEEEEEeCCCeEEEEeCCCCC----CC-CCCCCeEEEEECCCCCeEEEEeCCCeEEEEEC--CCCeEEEEEccCC
Q 004217 77 GRDARRGLASWVEAESLHHLRPKYCP----LS-PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDC--QTGSCLKVLHGHR 149 (767)
Q Consensus 77 ~sd~g~~LaSgs~DgsIrlWd~~t~~----L~-gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl--~tg~~l~~L~gH~ 149 (767)
++.++..+++...+++|.+||..+++ +. ++. +..++|+|||++|++++.|++|++||+ .+++++..+. +.
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g 221 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IG 221 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CC
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cC
Confidence 44567788889999999999998874 33 333 899999999999999999999999999 8899888887 45
Q ss_pred CCcEEEEEccC---CCcEEEEEe-CCCeEEEEECCCCeEEEeecC------------CCCeEEEEEcCCCCEEEEEE-C-
Q 004217 150 RTPWVVRFHPL---NPTIIASGS-LDHEVRLWNASTAECIGSRDF------------YRPIASIAFHASGELLAVAS-G- 211 (767)
Q Consensus 150 ~~V~sLafsP~---dg~lLaSgS-~DGtVrIWDl~tg~~i~~l~h------------~~~VtsVafSPdG~~LAsgS-d- 211 (767)
..+..++|+|. +++++++++ .+++|.+||..+++++..+.. ...+..+.++|++..+++.. +
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~ 301 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET 301 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC
Confidence 56899999981 455666655 589999999999998887642 23788999999988666555 3
Q ss_pred CcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe------eCCcCCCCcceeEee----cCCCc-c--CC
Q 004217 212 HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLDSSESSLTLAT----SPGYW-R--YP 278 (767)
Q Consensus 212 d~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs------vwdl~s~~~~~~l~t----~sG~~-~--~p 278 (767)
+.|.+||+.+.+.+. .....+...+..+.|+|||+++++++. +||+..++....+.. +.+.. . .+
T Consensus 302 g~i~vvd~~~~~~l~--~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p 379 (543)
T 1nir_A 302 GKVLLVNYKDIDNLT--VTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHP 379 (543)
T ss_dssp TEEEEEECTTSSSCE--EEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEET
T ss_pred CeEEEEEecCCCcce--eEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCC
Confidence 449999998765433 123346777899999999998887764 788877655444432 11100 0 01
Q ss_pred ------------CCeEEEecCCCCCC----CceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCce
Q 004217 279 ------------PPVICMAGAHSSSH----PGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSV 342 (767)
Q Consensus 279 ------------~~~v~l~~~~Ssd~----~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~ 342 (767)
...+.+++...... ..+...........+.+.|+||++++++....+. +.....
T Consensus 380 ~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~----------~~~~~~ 449 (543)
T 1nir_A 380 KYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNP----------DARISQ 449 (543)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCS----------SHHHHT
T ss_pred CCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCC----------CcccCc
Confidence 12344444333110 1111111112234457889999999998211000 000133
Q ss_pred eeeeccCCCCcee
Q 004217 343 RLLTYSTPSGQYE 355 (767)
Q Consensus 343 ~l~~~~~~~~q~~ 355 (767)
.+..||..+++..
T Consensus 450 ~v~v~d~~~~~~~ 462 (543)
T 1nir_A 450 SVAVFDLKNLDAK 462 (543)
T ss_dssp CEEEEETTCTTSC
T ss_pred eEEEEECCCCCCC
Confidence 5788998887755
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.67 E-value=7.9e-15 Score=152.16 Aligned_cols=174 Identities=13% Similarity=0.076 Sum_probs=127.8
Q ss_pred EEEeCCCeEEEEeCC-CCC-----CCCCCCCeEEEEECCCCCeEEEEeCC-CeEEEEECC--CCe--EEEEEccCCCCcE
Q 004217 85 ASWVEAESLHHLRPK-YCP-----LSPPPRSTIAAAFSPDGKTLASTHGD-HTVKIIDCQ--TGS--CLKVLHGHRRTPW 153 (767)
Q Consensus 85 aSgs~DgsIrlWd~~-t~~-----L~gH~~sVtsVaFSpDG~~LASgs~D-GtVrVWDl~--tg~--~l~~L~gH~~~V~ 153 (767)
++...++.|++|++. +++ ...|...+.+++|+|||++|++++.+ +.|++|++. +++ .+..+..+. .+.
T Consensus 9 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~ 87 (343)
T 1ri6_A 9 IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLT 87 (343)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCS
T ss_pred EeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCc
Confidence 344678999999885 221 23577789999999999999988886 999999997 554 344555444 789
Q ss_pred EEEEccCCCcEEEEEe-CCCeEEEEECC---CCeEEEeecCCCCeEEEEEcCCCCEEEEEE--CCcEEEEEcCC-Ccccc
Q 004217 154 VVRFHPLNPTIIASGS-LDHEVRLWNAS---TAECIGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYNM-REETS 226 (767)
Q Consensus 154 sLafsP~dg~lLaSgS-~DGtVrIWDl~---tg~~i~~l~h~~~VtsVafSPdG~~LAsgS--dd~V~VWDl~t-~~~~~ 226 (767)
.++|+| +++++++++ .++.|.+||+. +.+.+..+.....+.+++|+|+|++|++++ ++.|++||+.+ ++...
T Consensus 88 ~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 88 HISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp EEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred EEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 999999 777665554 58999999994 444555566666789999999999888876 45599999987 43321
Q ss_pred CC--eEEecCCCCeEEEEEccCCCeEEEEEe------eCCcC
Q 004217 227 SP--RIVLRTRRSLRAVHFHPHAAPLLLTAE------VNDLD 260 (767)
Q Consensus 227 ~~--~~l~~h~~~VtsVaFSPDG~~LlaSgs------vwdl~ 260 (767)
.. .........+..++|+|+++++++++. +|+++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 167 QDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp EEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred ecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 00 112223457889999999998877653 67775
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.67 E-value=4e-16 Score=181.23 Aligned_cols=172 Identities=9% Similarity=-0.038 Sum_probs=130.5
Q ss_pred EEEcCCCEEEEEeCCCeEEEEeCCCCC----CCCCCC---CeEEEEECCCCCeEEEEeCC---------CeEEEEECCCC
Q 004217 76 AGRDARRGLASWVEAESLHHLRPKYCP----LSPPPR---STIAAAFSPDGKTLASTHGD---------HTVKIIDCQTG 139 (767)
Q Consensus 76 A~sd~g~~LaSgs~DgsIrlWd~~t~~----L~gH~~---sVtsVaFSpDG~~LASgs~D---------GtVrVWDl~tg 139 (767)
+++.+++.+++ +.|++|++||..+++ +..|.. .|.+++|||||++|++++.+ +.|++||+.++
T Consensus 23 ~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~ 101 (723)
T 1xfd_A 23 KWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG 101 (723)
T ss_dssp CBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC
T ss_pred EEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCC
Confidence 34456666665 689999999998874 334544 49999999999999999874 78889999998
Q ss_pred eEEEEEc---cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecC-CCC------------------eEEE
Q 004217 140 SCLKVLH---GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-YRP------------------IASI 197 (767)
Q Consensus 140 ~~l~~L~---gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h-~~~------------------VtsV 197 (767)
+. ..+. +|...+..++|+| +++.|++++. +.|++||+.+++....... ... +.++
T Consensus 102 ~~-~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~ 178 (723)
T 1xfd_A 102 DP-QSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAH 178 (723)
T ss_dssp CC-EECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEE
T ss_pred ce-EeccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceE
Confidence 75 3443 4445588999999 8888988875 7999999999887765432 222 3789
Q ss_pred EEcCCCCEEEEEECC-----------------------------------cEEEEEcCCCccccCCeEEec------CCC
Q 004217 198 AFHASGELLAVASGH-----------------------------------KLYIWRYNMREETSSPRIVLR------TRR 236 (767)
Q Consensus 198 afSPdG~~LAsgSdd-----------------------------------~V~VWDl~t~~~~~~~~~l~~------h~~ 236 (767)
+|+|||++|++++.+ .|++||+.+++... .+.. +..
T Consensus 179 ~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~---~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 179 WWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDL---EMMPPDDPRMREY 255 (723)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCE---ECCCCCCGGGSSE
T ss_pred EECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeE---EeeCCccCCCccc
Confidence 999999999988732 48999998876322 2232 356
Q ss_pred CeEEEEEccCCCeEEEEE
Q 004217 237 SLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 237 ~VtsVaFSPDG~~LlaSg 254 (767)
.+..++|+|||+++++..
T Consensus 256 ~~~~~~~SpDg~~l~~~~ 273 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWL 273 (723)
T ss_dssp EEEEEEESSSSEEEEEEE
T ss_pred eeEEEEEeCCCeEEEEEE
Confidence 789999999999765543
No 138
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.66 E-value=1.4e-14 Score=153.03 Aligned_cols=181 Identities=12% Similarity=0.093 Sum_probs=126.6
Q ss_pred eEEEEEEcCCCEEEEEeC---CCeEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEe-CCCeEEEEECC-CCe
Q 004217 72 QIFEAGRDARRGLASWVE---AESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQ-TGS 140 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~---DgsIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs-~DGtVrVWDl~-tg~ 140 (767)
+..++++.+++ |+..+. ++.|.+|++..++ +..+...+..++|+|||++|++++ .++.|++||+. +++
T Consensus 42 p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~ 120 (347)
T 3hfq_A 42 PTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA 120 (347)
T ss_dssp CCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC
T ss_pred cceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC
Confidence 34466677777 665554 6899999997653 234677889999999999998888 68999999996 332
Q ss_pred --EEEEEcc---------CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECC-CCeEEEe----ecCCCCeEEEEEcCCCC
Q 004217 141 --CLKVLHG---------HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS-TAECIGS----RDFYRPIASIAFHASGE 204 (767)
Q Consensus 141 --~l~~L~g---------H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~-tg~~i~~----l~h~~~VtsVafSPdG~ 204 (767)
.+..+.. +...+.+++|+| +++++++...++.|++||+. +++.... ......+..++|+|+|+
T Consensus 121 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~ 199 (347)
T 3hfq_A 121 LTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQ 199 (347)
T ss_dssp EEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred eeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCC
Confidence 3333322 122478899999 77777777789999999998 5544322 22344678899999999
Q ss_pred EEEEEEC--CcEEEEEcCC--CccccCCeEEecCC------CCeEEEEEccCCCeEEEEEe
Q 004217 205 LLAVASG--HKLYIWRYNM--REETSSPRIVLRTR------RSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 205 ~LAsgSd--d~V~VWDl~t--~~~~~~~~~l~~h~------~~VtsVaFSPDG~~LlaSgs 255 (767)
+|++++. +.|.+|+++. ++... ........ ..+..++|+|||++|+++..
T Consensus 200 ~l~v~~~~~~~v~v~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 200 YAFLAGELSSQIASLKYDTQTGAFTQ-LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEE-EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCceEE-eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC
Confidence 8777663 4499999875 33211 11222222 45889999999998866654
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.66 E-value=2.6e-15 Score=175.12 Aligned_cols=177 Identities=10% Similarity=0.048 Sum_probs=139.2
Q ss_pred eEEEEEEcCCCEEEEEeC-CC-----eEEEEeCCCCC----CCCCC------------------------CCeEEEEECC
Q 004217 72 QIFEAGRDARRGLASWVE-AE-----SLHHLRPKYCP----LSPPP------------------------RSTIAAAFSP 117 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~-Dg-----sIrlWd~~t~~----L~gH~------------------------~sVtsVaFSp 117 (767)
...++++.+|+.|++++. |+ .|++||+.+++ +..+. ..|.+++|||
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Sp 118 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSP 118 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECT
T ss_pred CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECC
Confidence 456778899999999988 88 89999998773 22222 2378999999
Q ss_pred CCCeEEEEeCCCeEEEEECCCCe--EEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCC--
Q 004217 118 DGKTLASTHGDHTVKIIDCQTGS--CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRP-- 193 (767)
Q Consensus 118 DG~~LASgs~DGtVrVWDl~tg~--~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~-- 193 (767)
||++|++++. +.|++||+.+++ .+..+..|...+..++|+| ++++|++++ ++.|++||+.+++..........
T Consensus 119 Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~ 195 (741)
T 2ecf_A 119 DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTI 195 (741)
T ss_dssp TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSE
T ss_pred CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCCCCEEEeccCCccce
Confidence 9999999887 899999999883 3556777888999999999 999999887 56999999999887765432221
Q ss_pred ---------------eEEEEEcCCCCEEEEEE-CC---------------------------------cEEEEEcCC-Cc
Q 004217 194 ---------------IASIAFHASGELLAVAS-GH---------------------------------KLYIWRYNM-RE 223 (767)
Q Consensus 194 ---------------VtsVafSPdG~~LAsgS-dd---------------------------------~V~VWDl~t-~~ 223 (767)
+..++|+|||++|++++ ++ .|++||+.+ ++
T Consensus 196 ~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 275 (741)
T 2ecf_A 196 GNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ 275 (741)
T ss_dssp EESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC
T ss_pred eccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc
Confidence 47799999999888876 22 588889887 65
Q ss_pred cccCCeEEe--cCCCCeEEEEEccCCCeEEEEEe
Q 004217 224 ETSSPRIVL--RTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 224 ~~~~~~~l~--~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
... ... .|...+..++| |||++|++++.
T Consensus 276 ~~~---~~~~~~~~~~~~~~~~-pDg~~l~~~~~ 305 (741)
T 2ecf_A 276 TQW---IDLGKEQDIYLARVNW-RDPQHLSFQRQ 305 (741)
T ss_dssp CEE---ECCCSCSSEEEEEEEE-EETTEEEEEEE
T ss_pred eEE---ecCCCCcceEEEEEEe-CCCCEEEEEEe
Confidence 432 221 46778999999 99998887654
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.66 E-value=1.5e-14 Score=149.74 Aligned_cols=142 Identities=15% Similarity=0.160 Sum_probs=114.0
Q ss_pred CEEEEEeCCCeEEEEeCCCCCCC---CCCC---CeEEEEECCCCCeEE-EEeCCCeEEEEECCCCeEEEEEcc-C----C
Q 004217 82 RGLASWVEAESLHHLRPKYCPLS---PPPR---STIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHG-H----R 149 (767)
Q Consensus 82 ~~LaSgs~DgsIrlWd~~t~~L~---gH~~---sVtsVaFSpDG~~LA-Sgs~DGtVrVWDl~tg~~l~~L~g-H----~ 149 (767)
..++++..++.|++||..++++. .... .+..++|+|||++|+ ++..++.|.+||+.+++.+..+.. + .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 46888999999999999876321 1222 588999999998764 555678999999999998877653 2 2
Q ss_pred CCcEEEEEccCCCcEEEEEe------------CCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECCcEEEE
Q 004217 150 RTPWVVRFHPLNPTIIASGS------------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIW 217 (767)
Q Consensus 150 ~~V~sLafsP~dg~lLaSgS------------~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~V~VW 217 (767)
..+..++|+| ++++++++. .++.|.+||+.+++.+..+.....+..++|+|+|++|+++ ++.|++|
T Consensus 82 ~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~~~ 159 (337)
T 1pby_B 82 KSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLHVM 159 (337)
T ss_dssp ECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEEEE
T ss_pred ccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEEEE
Confidence 2678899999 888887775 5799999999999988887767778899999999988887 5669999
Q ss_pred EcCCCccc
Q 004217 218 RYNMREET 225 (767)
Q Consensus 218 Dl~t~~~~ 225 (767)
|+.+++..
T Consensus 160 d~~~~~~~ 167 (337)
T 1pby_B 160 DPEAGTLV 167 (337)
T ss_dssp ETTTTEEE
T ss_pred ECCCCcEe
Confidence 99887653
No 141
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.65 E-value=2.4e-15 Score=167.57 Aligned_cols=151 Identities=10% Similarity=0.013 Sum_probs=126.1
Q ss_pred ceEEEEEEcCCCEEE----EEeCCCeEEEEeCCCC---------------CCCCCCCCeEEEEECCC-CCeEEEEeCCCe
Q 004217 71 SQIFEAGRDARRGLA----SWVEAESLHHLRPKYC---------------PLSPPPRSTIAAAFSPD-GKTLASTHGDHT 130 (767)
Q Consensus 71 s~~~vA~sd~g~~La----Sgs~DgsIrlWd~~t~---------------~L~gH~~sVtsVaFSpD-G~~LASgs~DGt 130 (767)
....++++.++..|+ +++.|+.|++||+.+. .+.+|...|.+++|+|+ +++|++++.||+
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 367788888999999 7889999999997542 24579999999999997 899999999999
Q ss_pred EEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec--------CCCCeEEEEEcCC
Q 004217 131 VKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD--------FYRPIASIAFHAS 202 (767)
Q Consensus 131 VrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~--------h~~~VtsVafSPd 202 (767)
|+|||++++..+....+|...|.+++|+| ++++|++|+.|++|++||++ ++....+. |...|.+++|+++
T Consensus 174 v~iwD~~~~~~~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~ 251 (434)
T 2oit_A 174 IAVLQVTETVKVCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGT 251 (434)
T ss_dssp EEEEEESSSEEEEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEET
T ss_pred EEEEEcCCCcceeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecC
Confidence 99999999987777788999999999999 89999999999999999998 55544432 1237899999999
Q ss_pred CCEEEEEE-CC-------cEEEEEcCCCc
Q 004217 203 GELLAVAS-GH-------KLYIWRYNMRE 223 (767)
Q Consensus 203 G~~LAsgS-dd-------~V~VWDl~t~~ 223 (767)
+.++++.+ .+ .+++||+++.+
T Consensus 252 ~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 252 YVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp TEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred ceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 88876554 21 19999998654
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.64 E-value=3.9e-14 Score=147.68 Aligned_cols=178 Identities=12% Similarity=0.088 Sum_probs=131.9
Q ss_pred EEEEEcCCCEEEEEeC-CCeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCeEEEEeCCC---eEEEEECCCCeEEEE
Q 004217 74 FEAGRDARRGLASWVE-AESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLASTHGDH---TVKIIDCQTGSCLKV 144 (767)
Q Consensus 74 ~vA~sd~g~~LaSgs~-DgsIrlWd~~t~~L-----~gH~~sVtsVaFSpDG~~LASgs~DG---tVrVWDl~tg~~l~~ 144 (767)
.++++.+++.++.... ++.|.+||..++++ ..+...+.+++|+|||++|+++..++ .|++||+.+++.+..
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE
Confidence 6777788887766655 88999999988754 24445555599999999999555553 999999999998888
Q ss_pred EccCCCCcEEEEEccCCCc-EEEEEeCCCe-EEEEECCCCeEE-----EeecCCCCeEEEEEcCCCCEEEEEEC--CcEE
Q 004217 145 LHGHRRTPWVVRFHPLNPT-IIASGSLDHE-VRLWNASTAECI-----GSRDFYRPIASIAFHASGELLAVASG--HKLY 215 (767)
Q Consensus 145 L~gH~~~V~sLafsP~dg~-lLaSgS~DGt-VrIWDl~tg~~i-----~~l~h~~~VtsVafSPdG~~LAsgSd--d~V~ 215 (767)
+..+ ..+..++|+| +++ ++++...++. |.+|++.....+ ..+.....+..++|+|+|++++++.. +.|+
T Consensus 124 ~~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 201 (331)
T 3u4y_A 124 IPIP-YDAVGIAISP-NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIG 201 (331)
T ss_dssp EECC-TTEEEEEECT-TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EECC-CCccceEECC-CCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEE
Confidence 7644 4578999999 665 6666667688 999998864332 22345567899999999997776663 4499
Q ss_pred EEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 216 IWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 216 VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
+||+.+++.......+ .....+..++|+|||++++++.
T Consensus 202 v~d~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 202 ILETQNPENITLLNAV-GTNNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp EEECSSTTSCEEEEEE-ECSSCCCCEEECTTSSEEEEEC
T ss_pred EEECCCCcccceeeec-cCCCCCceEEECCCCCEEEEEE
Confidence 9999887751101122 3456788999999999877664
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.63 E-value=1.1e-13 Score=144.79 Aligned_cols=176 Identities=8% Similarity=0.034 Sum_probs=137.0
Q ss_pred EEEEEEcCCCEEE-EEeCCCeEEEEeCCCCCC----CCCCC---------CeEEEEECCCCCeEEEEe--CCCeEEEEEC
Q 004217 73 IFEAGRDARRGLA-SWVEAESLHHLRPKYCPL----SPPPR---------STIAAAFSPDGKTLASTH--GDHTVKIIDC 136 (767)
Q Consensus 73 ~~vA~sd~g~~La-Sgs~DgsIrlWd~~t~~L----~gH~~---------sVtsVaFSpDG~~LASgs--~DGtVrVWDl 136 (767)
..++++.+++.++ +...++.|.+||..++++ ..+.. .+.+++|+|||++|++++ .++.|.+||.
T Consensus 92 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~ 171 (353)
T 3vgz_A 92 FGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDG 171 (353)
T ss_dssp CSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEET
T ss_pred ceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcC
Confidence 3456667777554 455679999999987642 22221 278999999999887776 4789999999
Q ss_pred CCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-----CCCCeEEEEEcCCCCEEEEEEC
Q 004217 137 QTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-----FYRPIASIAFHASGELLAVASG 211 (767)
Q Consensus 137 ~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-----h~~~VtsVafSPdG~~LAsgSd 211 (767)
.+++.+..+..+...+..++|+| +++.++.++.++.|.+||+.+++.+..+. +...+..++|+|+|+++++++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 250 (353)
T 3vgz_A 172 GNIKLKTAIQNTGKMSTGLALDS-EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS 250 (353)
T ss_dssp TTTEEEEEECCCCTTCCCCEEET-TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES
T ss_pred CCCceEEEecCCCCccceEEECC-CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC
Confidence 99999988876667788999999 88889999999999999999999887754 3456788999999998887774
Q ss_pred --CcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 212 --HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 212 --d~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
+.|.+||+.+++... .+.... ...++|+|||++++++.
T Consensus 251 ~~~~v~~~d~~~~~~~~---~~~~~~--~~~~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 251 KAAEVLVVDTRNGNILA---KVAAPE--SLAVLFNPARNEAYVTH 290 (353)
T ss_dssp SSSEEEEEETTTCCEEE---EEECSS--CCCEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCCCcEEE---EEEcCC--CceEEECCCCCEEEEEE
Confidence 349999998887644 222222 25799999999777765
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.63 E-value=2.5e-14 Score=166.82 Aligned_cols=233 Identities=10% Similarity=0.110 Sum_probs=159.5
Q ss_pred CCCeEEEEECCCCCeEEEEeC-CC-----eEEEEECCCCeEEEEEccCCCC------------------------cEEEE
Q 004217 107 PRSTIAAAFSPDGKTLASTHG-DH-----TVKIIDCQTGSCLKVLHGHRRT------------------------PWVVR 156 (767)
Q Consensus 107 ~~sVtsVaFSpDG~~LASgs~-DG-----tVrVWDl~tg~~l~~L~gH~~~------------------------V~sLa 156 (767)
...+.+++|||||++|++++. |+ .|++||+.+++....+..+... |..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 557999999999999999998 88 9999999999887777655433 78999
Q ss_pred EccCCCcEEEEEeCCCeEEEEECCCC---eEEEeecCCCCeEEEEEcCCCCEEEEEECCcEEEEEcCCCccccCCeEEec
Q 004217 157 FHPLNPTIIASGSLDHEVRLWNASTA---ECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLR 233 (767)
Q Consensus 157 fsP~dg~lLaSgS~DGtVrIWDl~tg---~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t~~~~~~~~~l~~ 233 (767)
|+| |+++|++++. ++|++||+.++ +......+...+..++|+|||++|+.++++.|++||+.+++... ....
T Consensus 116 ~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~---~~~~ 190 (741)
T 2ecf_A 116 WSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQ---LTAD 190 (741)
T ss_dssp ECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEE---CCCC
T ss_pred ECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEE---eccC
Confidence 999 8999998886 99999999988 65555567788999999999999999998889999998876533 1222
Q ss_pred CCCC----------------eEEEEEccCCCeEEEEEeeCCcCC-CC-------c--ceeE-eecCCCccCCCCeEEEec
Q 004217 234 TRRS----------------LRAVHFHPHAAPLLLTAEVNDLDS-SE-------S--SLTL-ATSPGYWRYPPPVICMAG 286 (767)
Q Consensus 234 h~~~----------------VtsVaFSPDG~~LlaSgsvwdl~s-~~-------~--~~~l-~t~sG~~~~p~~~v~l~~ 286 (767)
+... +.+++|||||++|+++........ .. . ...+ ....|. ......+.+++
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~-~~~~~~l~~~d 269 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGD-ANVQVKLGVIS 269 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTS-CCCEEEEEEEC
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCC-CCCeeEEEEEE
Confidence 2221 478999999998888765321100 00 0 0000 000111 00112455666
Q ss_pred CCC-CCCCceeeccCCCCCCceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeeeec
Q 004217 287 AHS-SSHPGLAEEVPLITPPFLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVLS 359 (767)
Q Consensus 287 ~~S-sd~~~L~sg~~~~slpil~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~~ 359 (767)
... +....+..+ ......+..++| |||++|++...+. ......+..||..+++....+.
T Consensus 270 ~~~~~~~~~~~~~-~~~~~~~~~~~~-pDg~~l~~~~~~~------------~~~~~~i~~~d~~~g~~~~~~~ 329 (741)
T 2ecf_A 270 PAEQAQTQWIDLG-KEQDIYLARVNW-RDPQHLSFQRQSR------------DQKKLDLVEVTLASNQQRVLAH 329 (741)
T ss_dssp SSTTCCCEEECCC-SCSSEEEEEEEE-EETTEEEEEEEET------------TSSEEEEEEEETTTCCEEEEEE
T ss_pred CCCCCceEEecCC-CCcceEEEEEEe-CCCCEEEEEEecc------------cCCeEEEEEEECCCCceEEEEE
Confidence 554 433222211 012223447899 9999999743311 1245678899999888776664
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.62 E-value=3e-14 Score=165.43 Aligned_cols=177 Identities=10% Similarity=-0.011 Sum_probs=136.3
Q ss_pred eEEEEEEcCCCEEEEEeCC---------CeEEEEeCCCCC---CC---CCCCCeEEEEECCCCCeEEEEeCCCeEEEEEC
Q 004217 72 QIFEAGRDARRGLASWVEA---------ESLHHLRPKYCP---LS---PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDC 136 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~D---------gsIrlWd~~t~~---L~---gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl 136 (767)
...++++.+++.|++++.+ +.|.+||+.+++ +. +|...+..++|||||++||+++. +.|++||+
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~ 141 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAH 141 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESS
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEEC
Confidence 4567888999999998765 778899998874 33 44455899999999999999886 79999999
Q ss_pred CCCeEEEEEccCCCCc------------------EEEEEccCCCcEEEEEeCCC--------------------------
Q 004217 137 QTGSCLKVLHGHRRTP------------------WVVRFHPLNPTIIASGSLDH-------------------------- 172 (767)
Q Consensus 137 ~tg~~l~~L~gH~~~V------------------~sLafsP~dg~lLaSgS~DG-------------------------- 172 (767)
.+++.......+...+ ..++|+| |++.|++++.|+
T Consensus 142 ~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 142 VGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 9988777666554444 7899999 889888887553
Q ss_pred --------eEEEEECCCCeEEEeec-C------CCCeEEEEEcCCCCEEEEEEC---C--cEEEEEcCCCccccCCeEE-
Q 004217 173 --------EVRLWNASTAECIGSRD-F------YRPIASIAFHASGELLAVASG---H--KLYIWRYNMREETSSPRIV- 231 (767)
Q Consensus 173 --------tVrIWDl~tg~~i~~l~-h------~~~VtsVafSPdG~~LAsgSd---d--~V~VWDl~t~~~~~~~~~l- 231 (767)
+|++||+.+++....+. + ...+..++|+|||++|++... + .|++||+.+++... ..
T Consensus 221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~---~~~ 297 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK---KHE 297 (723)
T ss_dssp TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE---EEE
T ss_pred CCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE---EEE
Confidence 79999999887644443 2 457889999999998877652 1 29999999887533 22
Q ss_pred ecCCCCeE----EEEEccCCCeEEEE
Q 004217 232 LRTRRSLR----AVHFHPHAAPLLLT 253 (767)
Q Consensus 232 ~~h~~~Vt----sVaFSPDG~~LlaS 253 (767)
..+...+. .++|+|||+.|+..
T Consensus 298 ~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 298 DESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp EECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred eccCCEEeccCCCceEcCCCCeEEEE
Confidence 23334443 88999999988875
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.59 E-value=6.7e-14 Score=145.81 Aligned_cols=146 Identities=14% Similarity=0.086 Sum_probs=112.0
Q ss_pred EEcCCCEEEEEeCCCeEEEEeCCCCCC----CCC-CCCeEEEEECCCCCeEE-EEeCCCeEEEEECCCCeEEEEEccCC-
Q 004217 77 GRDARRGLASWVEAESLHHLRPKYCPL----SPP-PRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHGHR- 149 (767)
Q Consensus 77 ~sd~g~~LaSgs~DgsIrlWd~~t~~L----~gH-~~sVtsVaFSpDG~~LA-Sgs~DGtVrVWDl~tg~~l~~L~gH~- 149 (767)
+..++..+++.+.++.|++||..++++ ..+ ...+..++|+|||++++ +...++.|.+||+.+++.+..+..+.
T Consensus 7 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~ 86 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV 86 (349)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCS
T ss_pred ccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc
Confidence 345777888999999999999988742 222 22588999999998665 55568999999999999887776332
Q ss_pred -----CCcEEEEEccCCCcEEEEEeCC------------CeEEEEECCCCeE---EEeecCCCCeEEEEEcCCCCEEEEE
Q 004217 150 -----RTPWVVRFHPLNPTIIASGSLD------------HEVRLWNASTAEC---IGSRDFYRPIASIAFHASGELLAVA 209 (767)
Q Consensus 150 -----~~V~sLafsP~dg~lLaSgS~D------------GtVrIWDl~tg~~---i~~l~h~~~VtsVafSPdG~~LAsg 209 (767)
..+..++|+| +++++++++.+ +.|.+||+.+++. +..+.+...+.+++|+|+|+ ++++
T Consensus 87 ~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~ 164 (349)
T 1jmx_B 87 PGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVA 164 (349)
T ss_dssp TTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEE
T ss_pred cccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEc
Confidence 2378899999 88888888765 8999999988543 34445556788999999999 5554
Q ss_pred ECCcEEEEEcCCCccc
Q 004217 210 SGHKLYIWRYNMREET 225 (767)
Q Consensus 210 Sdd~V~VWDl~t~~~~ 225 (767)
++.|++||+.+++..
T Consensus 165 -~~~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 165 -GPDIYKMDVKTGKYT 179 (349)
T ss_dssp -SSSEEEECTTTCCEE
T ss_pred -cCcEEEEeCCCCcee
Confidence 344999999887653
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.59 E-value=9.5e-14 Score=161.22 Aligned_cols=244 Identities=13% Similarity=0.114 Sum_probs=163.9
Q ss_pred EEEEcCCCEEEEEeCCCeEEEEeCCC-----CC---C-CCCCCC--------------eEEEEECCCCCeEEEEe-----
Q 004217 75 EAGRDARRGLASWVEAESLHHLRPKY-----CP---L-SPPPRS--------------TIAAAFSPDGKTLASTH----- 126 (767)
Q Consensus 75 vA~sd~g~~LaSgs~DgsIrlWd~~t-----~~---L-~gH~~s--------------VtsVaFSpDG~~LASgs----- 126 (767)
.+++.+++.|+.. .++.|++|++.+ ++ + ..+... +.+++|||||++|++++
T Consensus 126 ~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~ 204 (706)
T 2z3z_A 126 LDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSM 204 (706)
T ss_dssp CEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTT
T ss_pred CcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCC
Confidence 5677888888885 689999999987 53 1 223332 48999999999999987
Q ss_pred ----------------------------CCCeEEEEECCCCeEEEEEc--cCCCCcEEEEEccCCCcEEEEEeCCC----
Q 004217 127 ----------------------------GDHTVKIIDCQTGSCLKVLH--GHRRTPWVVRFHPLNPTIIASGSLDH---- 172 (767)
Q Consensus 127 ----------------------------~DGtVrVWDl~tg~~l~~L~--gH~~~V~sLafsP~dg~lLaSgS~DG---- 172 (767)
.+..|++||+.+++...... .|...+..++|+| +++.|++++.|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~ 283 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSP-DENILYVAEVNRAQNE 283 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECT-TSSEEEEEEECTTSCE
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEEC-CCCEEEEEEeCCCCCe
Confidence 44789999999988655442 4667789999999 899888887775
Q ss_pred -eEEEEECCCC-eEEEeec--CCC---CeEEEEEcC--CCCEEEEEECCc-EEEEEcC-CCccccCCeEEecCCCCeEE-
Q 004217 173 -EVRLWNASTA-ECIGSRD--FYR---PIASIAFHA--SGELLAVASGHK-LYIWRYN-MREETSSPRIVLRTRRSLRA- 240 (767)
Q Consensus 173 -tVrIWDl~tg-~~i~~l~--h~~---~VtsVafSP--dG~~LAsgSdd~-V~VWDl~-t~~~~~~~~~l~~h~~~Vts- 240 (767)
.|++||+.++ +...... ... .+..++|+| +|++|++++.++ ++||+++ +++... .+..+...+..
T Consensus 284 ~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~---~l~~~~~~v~~~ 360 (706)
T 2z3z_A 284 CKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIR---QVTKGEWEVTNF 360 (706)
T ss_dssp EEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEE---ECCCSSSCEEEE
T ss_pred eEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEE---ecCCCCeEEEee
Confidence 9999999998 4333321 222 246789999 999988887555 8888776 333322 45567777876
Q ss_pred EEEccCCCeEEEEEeeCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCceeeccCCCCCCceeeEEecCCCEEEE
Q 004217 241 VHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPPFLRPSFVRDDERISL 320 (767)
Q Consensus 241 VaFSPDG~~LlaSgsvwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg~~~~slpil~psFSpDg~rIva 320 (767)
++|+|||+.|++++....- ....+..++...+....+. ....+..++|+|||++++.
T Consensus 361 ~~~spdg~~l~~~~~~~~~------------------~~~~l~~~d~~~~~~~~l~-----~~~~~~~~~~spdg~~l~~ 417 (706)
T 2z3z_A 361 AGFDPKGTRLYFESTEASP------------------LERHFYCIDIKGGKTKDLT-----PESGMHRTQLSPDGSAIID 417 (706)
T ss_dssp EEECTTSSEEEEEESSSCT------------------TCBEEEEEETTCCCCEESC-----CSSSEEEEEECTTSSEEEE
T ss_pred eEEcCCCCEEEEEecCCCC------------------ceEEEEEEEcCCCCceecc-----CCCceEEEEECCCCCEEEE
Confidence 8999999988877642110 0012333332222211111 1123457899999999987
Q ss_pred eecCCCCCCcccccccccCCceeeeeccCCCCceeeeecc
Q 004217 321 QHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELVLSP 360 (767)
Q Consensus 321 ~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~~~p 360 (767)
..... .....+..||..+++ ...+..
T Consensus 418 ~~~~~-------------~~p~~i~l~d~~~~~-~~~~~~ 443 (706)
T 2z3z_A 418 IFQSP-------------TVPRKVTVTNIGKGS-HTLLEA 443 (706)
T ss_dssp EEECS-------------SCSCEEEEEESSSCE-EEEEEC
T ss_pred EecCC-------------CCCcEEEEEECCCCe-Eeeccc
Confidence 32211 123457788888776 344433
No 148
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.58 E-value=1.3e-14 Score=169.10 Aligned_cols=171 Identities=12% Similarity=0.074 Sum_probs=125.0
Q ss_pred EEEcCCCEEEEEeCCCeEEEEeCCCCC---CCC-CCC---CeEEEEECCCCCeEEEEeC---------CCeEEEEECCCC
Q 004217 76 AGRDARRGLASWVEAESLHHLRPKYCP---LSP-PPR---STIAAAFSPDGKTLASTHG---------DHTVKIIDCQTG 139 (767)
Q Consensus 76 A~sd~g~~LaSgs~DgsIrlWd~~t~~---L~g-H~~---sVtsVaFSpDG~~LASgs~---------DGtVrVWDl~tg 139 (767)
.++.++..++ .+.|+.|++||..+++ +.. |.. .+.+++|||||++|++++. |+.|++||++++
T Consensus 22 ~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g 100 (719)
T 1z68_A 22 NWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG 100 (719)
T ss_dssp EESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred EECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC
Confidence 3445554444 4569999999998874 222 322 4899999999999999876 789999999998
Q ss_pred eEE--EEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec--CCCCe-----------------EEEE
Q 004217 140 SCL--KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD--FYRPI-----------------ASIA 198 (767)
Q Consensus 140 ~~l--~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~--h~~~V-----------------tsVa 198 (767)
+.+ ..+ ...+..++|+| |++.|+++. |++|++||+.+++...... +...| .+++
T Consensus 101 ~~~~~~~l---~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 101 EFVRGNEL---PRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp EECCSSCC---CSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred ccccceec---CcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 862 222 35688999999 888888875 7899999999888765432 22222 4899
Q ss_pred EcCCCCEEEEEECC-----------------------------------cEEEEEcCCCccc---c--CCeEEecCCCCe
Q 004217 199 FHASGELLAVASGH-----------------------------------KLYIWRYNMREET---S--SPRIVLRTRRSL 238 (767)
Q Consensus 199 fSPdG~~LAsgSdd-----------------------------------~V~VWDl~t~~~~---~--~~~~l~~h~~~V 238 (767)
|+|||++|++++.+ .|++||+.+++.. . .+..+..|...+
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF 255 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE
Confidence 99999999988732 5889999887642 1 001233577889
Q ss_pred EEEEEccCCCeEEE
Q 004217 239 RAVHFHPHAAPLLL 252 (767)
Q Consensus 239 tsVaFSPDG~~Lla 252 (767)
.+++|+||++.+++
T Consensus 256 ~~~~~SpD~~~~~~ 269 (719)
T 1z68_A 256 SWLTWVTDERVCLQ 269 (719)
T ss_dssp EEEEESSSSEEEEE
T ss_pred EEeEEeCCCeEEEE
Confidence 99999999764443
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.57 E-value=4.5e-13 Score=138.88 Aligned_cols=180 Identities=12% Similarity=0.079 Sum_probs=128.6
Q ss_pred eEEEEEEcCCCEEEEEeCC-CeEEEEeCC--CCCCC-----CCCCCeEEEEECCCCCeEEEEeC-CCeEEEEECC---CC
Q 004217 72 QIFEAGRDARRGLASWVEA-ESLHHLRPK--YCPLS-----PPPRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQ---TG 139 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~D-gsIrlWd~~--t~~L~-----gH~~sVtsVaFSpDG~~LASgs~-DGtVrVWDl~---tg 139 (767)
...++++.+++.|++++.+ +.|++|++. ++++. .....+..++|+|+|++|++++. ++.|++||+. ++
T Consensus 40 ~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~ 119 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPV 119 (343)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEE
T ss_pred CceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccc
Confidence 4457777888988888876 999999987 44211 12237899999999998877665 8899999994 34
Q ss_pred eEEEEEccCCCCcEEEEEccCCCcEEEEEe-CCCeEEEEECCC-CeEEE------eecCCCCeEEEEEcCCCCEEEEEE-
Q 004217 140 SCLKVLHGHRRTPWVVRFHPLNPTIIASGS-LDHEVRLWNAST-AECIG------SRDFYRPIASIAFHASGELLAVAS- 210 (767)
Q Consensus 140 ~~l~~L~gH~~~V~sLafsP~dg~lLaSgS-~DGtVrIWDl~t-g~~i~------~l~h~~~VtsVafSPdG~~LAsgS- 210 (767)
+.+..+..+ ..+.+++|+| +++++++++ .|+.|++||+.+ ++... .......+..++|+|+|++|++++
T Consensus 120 ~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 120 GVVDVVEGL-DGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE 197 (343)
T ss_dssp EEEEEECCC-TTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET
T ss_pred cccccccCC-CCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC
Confidence 455555544 4588999999 777777666 899999999987 65432 122455788999999999877666
Q ss_pred C-CcEEEEEcCC--CccccCCeEEe----c--CCCCeEEEEEccCCCeEEEEE
Q 004217 211 G-HKLYIWRYNM--REETSSPRIVL----R--TRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 211 d-d~V~VWDl~t--~~~~~~~~~l~----~--h~~~VtsVaFSPDG~~LlaSg 254 (767)
. +.|.+||++. ++... ..... . ....+..++|+|||++|+++.
T Consensus 198 ~~~~i~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~ 249 (343)
T 1ri6_A 198 LNSSVDVWELKDPHGNIEC-VQTLDMMPENFSDTRWAADIHITPDGRHLYACD 249 (343)
T ss_dssp TTTEEEEEESSCTTSCCEE-EEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEEecCCCCcEEE-EeeccccCccccccCCccceEECCCCCEEEEEe
Confidence 3 4499999964 32211 11111 1 134577899999999887665
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.57 E-value=6.8e-14 Score=162.47 Aligned_cols=176 Identities=13% Similarity=0.130 Sum_probs=131.3
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCC-----CeEEE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQT-----GSCLK 143 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~t-----g~~l~ 143 (767)
...++++.+ +.++.. .++.|++||+.+++ +..+...+.+++|||||++|+++ .|+.|++||+.+ ++...
T Consensus 84 v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~ 160 (706)
T 2z3z_A 84 SFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIA 160 (706)
T ss_dssp CEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEE
T ss_pred ceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEE
Confidence 556777777 555544 35999999998773 45677789999999999999985 679999999998 87665
Q ss_pred EEccCCCC--------------cEEEEEccCCCcEEEEEe---------------------------------CCCeEEE
Q 004217 144 VLHGHRRT--------------PWVVRFHPLNPTIIASGS---------------------------------LDHEVRL 176 (767)
Q Consensus 144 ~L~gH~~~--------------V~sLafsP~dg~lLaSgS---------------------------------~DGtVrI 176 (767)
....+... +.++.|+| |+++|++++ .+..|++
T Consensus 161 ~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~ 239 (706)
T 2z3z_A 161 VTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGI 239 (706)
T ss_dssp SCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEE
T ss_pred eccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEE
Confidence 44444332 47899999 899999887 4578999
Q ss_pred EECCCCeEEEee---cCCCCeEEEEEcCCCCEEEEEE-CC-----cEEEEEcCCCccccCCeEE-ecCCC---CeEEEEE
Q 004217 177 WNASTAECIGSR---DFYRPIASIAFHASGELLAVAS-GH-----KLYIWRYNMREETSSPRIV-LRTRR---SLRAVHF 243 (767)
Q Consensus 177 WDl~tg~~i~~l---~h~~~VtsVafSPdG~~LAsgS-dd-----~V~VWDl~t~~~~~~~~~l-~~h~~---~VtsVaF 243 (767)
||+.+++..... .+...+..++|+|||++|++++ +. .|++||+.+++... ... ..+.. .+..++|
T Consensus 240 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~--~~~~~~~~~~~~~~~~~~~ 317 (706)
T 2z3z_A 240 YHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVR--TLFVETDKHYVEPLHPLTF 317 (706)
T ss_dssp EETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEE--EEEEEECSSCCCCCSCCEE
T ss_pred EECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceee--EEEEccCCCeECccCCcee
Confidence 999998876554 3556789999999999888876 32 49999999884322 111 12222 3467899
Q ss_pred cc--CCCeEEEE
Q 004217 244 HP--HAAPLLLT 253 (767)
Q Consensus 244 SP--DG~~LlaS 253 (767)
+| ||++++++
T Consensus 318 sp~~dg~~l~~~ 329 (706)
T 2z3z_A 318 LPGSNNQFIWQS 329 (706)
T ss_dssp CTTCSSEEEEEE
T ss_pred ecCCCCEEEEEE
Confidence 99 99855444
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.55 E-value=4.9e-13 Score=138.26 Aligned_cols=173 Identities=17% Similarity=0.116 Sum_probs=125.9
Q ss_pred EEEEEEcCCCEE-EEEeCCCeEEEEeCCCCCCC-----CC----CCCeEEEEECCCCCeEEEEe------------CCCe
Q 004217 73 IFEAGRDARRGL-ASWVEAESLHHLRPKYCPLS-----PP----PRSTIAAAFSPDGKTLASTH------------GDHT 130 (767)
Q Consensus 73 ~~vA~sd~g~~L-aSgs~DgsIrlWd~~t~~L~-----gH----~~sVtsVaFSpDG~~LASgs------------~DGt 130 (767)
..++++.+++.+ ++...++.|.+||..+++.. ++ ...+.+++|+|||++|+++. .++.
T Consensus 37 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~ 116 (337)
T 1pby_B 37 MVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTR 116 (337)
T ss_dssp CCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCE
T ss_pred cceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCce
Confidence 345666777665 45566789999999876421 11 22677899999999998886 5799
Q ss_pred EEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCC-------------------
Q 004217 131 VKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY------------------- 191 (767)
Q Consensus 131 VrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~------------------- 191 (767)
|.+||+.+++.+..+.. ...+..++|+| ++++++++ ++.|.+||+.+++.+..+...
T Consensus 117 i~v~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 192 (337)
T 1pby_B 117 VALYDAETLSRRKAFEA-PRQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQH 192 (337)
T ss_dssp EEEEETTTTEEEEEEEC-CSSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCC
T ss_pred EEEEECCCCcEEEEEeC-CCCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeec
Confidence 99999999998877764 45678899999 77777766 688999999988876544311
Q ss_pred ------------------------------------------------CCeEEEEEcCCCCEEEEEECCcEEEEEcCCCc
Q 004217 192 ------------------------------------------------RPIASIAFHASGELLAVASGHKLYIWRYNMRE 223 (767)
Q Consensus 192 ------------------------------------------------~~VtsVafSPdG~~LAsgSdd~V~VWDl~t~~ 223 (767)
..+.+++|+|+|++|+++ ++.|++||+.+++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~ 271 (337)
T 1pby_B 193 ESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNA 271 (337)
T ss_dssp TTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTE
T ss_pred cCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCc
Confidence 123457888888888777 5668888887766
Q ss_pred cccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 224 ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 224 ~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
... .+ .....+.+++|+|||+++++++
T Consensus 272 ~~~---~~-~~~~~~~~~~~s~dg~~l~~~~ 298 (337)
T 1pby_B 272 SIK---RV-PLPHSYYSVNVSTDGSTVWLGG 298 (337)
T ss_dssp EEE---EE-ECSSCCCEEEECTTSCEEEEES
T ss_pred Ccc---ee-cCCCceeeEEECCCCCEEEEEc
Confidence 533 22 2335677888888888776654
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.54 E-value=1.8e-13 Score=167.72 Aligned_cols=224 Identities=12% Similarity=0.054 Sum_probs=164.4
Q ss_pred EEEEcCCCEEEEEeCCCeEEEEeCCCCCC---CC-----------CCCCeEEEEEC-CCCCeEEEEeCCCeEEEEECCCC
Q 004217 75 EAGRDARRGLASWVEAESLHHLRPKYCPL---SP-----------PPRSTIAAAFS-PDGKTLASTHGDHTVKIIDCQTG 139 (767)
Q Consensus 75 vA~sd~g~~LaSgs~DgsIrlWd~~t~~L---~g-----------H~~sVtsVaFS-pDG~~LASgs~DGtVrVWDl~tg 139 (767)
.+++.+++.|+.. .++.|.+|+....++ .+ |...+.+++|| |||++|++++ ++.|++|++.++
T Consensus 250 ~~~SpDG~~la~~-~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~ 327 (1045)
T 1k32_A 250 RHLNTDGRRILFS-KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGT 327 (1045)
T ss_dssp EEEEESSSCEEEE-ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSS
T ss_pred eeEcCCCCEEEEE-eCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCC
Confidence 4666778877776 488999999855433 22 33468999999 9999999988 789999999887
Q ss_pred eEEEEEccCCC-CcEEEEEccCCCcEEEEEeCCCeEE-EEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECCc-EEE
Q 004217 140 SCLKVLHGHRR-TPWVVRFHPLNPTIIASGSLDHEVR-LWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHK-LYI 216 (767)
Q Consensus 140 ~~l~~L~gH~~-~V~sLafsP~dg~lLaSgS~DGtVr-IWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~-V~V 216 (767)
+.. .+..|.. .+..++|+ +++.|++++.+..+. +||+.+++......+...+..++|+|||++|++++.++ |++
T Consensus 328 ~~~-~~~~~~~~~~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~ 404 (1045)
T 1k32_A 328 YVL-KVPEPLRIRYVRRGGD--TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMT 404 (1045)
T ss_dssp BEE-ECSCCSCEEEEEECSS--SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ceE-EccCCCcceEEeeeEc--CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEE
Confidence 744 4677777 89999999 678888888888899 99999887665556778899999999999999998765 999
Q ss_pred EEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCcee
Q 004217 217 WRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLA 296 (767)
Q Consensus 217 WDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgsvwdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~ 296 (767)
||+.+++... ....|...+.+++|||||++|++++...+... .......+.+|+...+....+
T Consensus 405 ~d~~tg~~~~---~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~-------------~~~~~~~i~l~d~~~g~~~~l- 467 (1045)
T 1k32_A 405 VDLETGKPTV---IERSREAMITDFTISDNSRFIAYGFPLKHGET-------------DGYVMQAIHVYDMEGRKIFAA- 467 (1045)
T ss_dssp EETTTCCEEE---EEECSSSCCCCEEECTTSCEEEEEEEECSSTT-------------CSCCEEEEEEEETTTTEEEEC-
T ss_pred EECCCCceEE---eccCCCCCccceEECCCCCeEEEEecCccccc-------------cCCCCCeEEEEECCCCcEEEe-
Confidence 9999887544 44578889999999999998877765321110 000113466666444321111
Q ss_pred eccCCCCCCceeeEEecCCCEEEEeec
Q 004217 297 EEVPLITPPFLRPSFVRDDERISLQHT 323 (767)
Q Consensus 297 sg~~~~slpil~psFSpDg~rIva~~~ 323 (767)
. ........+.|+|||++|+....
T Consensus 468 ~---~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 468 T---TENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp S---CSSSBEEEEEECTTSCEEEEEES
T ss_pred e---CCCcccCCceEcCCCCEEEEEec
Confidence 1 11223446899999999987443
No 153
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.53 E-value=4.1e-13 Score=158.43 Aligned_cols=173 Identities=13% Similarity=0.053 Sum_probs=127.1
Q ss_pred EEEEcCCCEEEEEeCCCeEEEEeCCCCC----CCCCCC-----CeEEEEECCCCCeEEEEeCC---------CeEEEEEC
Q 004217 75 EAGRDARRGLASWVEAESLHHLRPKYCP----LSPPPR-----STIAAAFSPDGKTLASTHGD---------HTVKIIDC 136 (767)
Q Consensus 75 vA~sd~g~~LaSgs~DgsIrlWd~~t~~----L~gH~~-----sVtsVaFSpDG~~LASgs~D---------GtVrVWDl 136 (767)
+.+..++..+++. |+.|++||+.+++ +.+|.. ....++|||||++|+.++.+ +.+.+||+
T Consensus 22 ~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 22 LRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp EEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred cEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC
Confidence 4566777888876 8999999998873 344443 23458999999999999886 55679999
Q ss_pred CCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec--CCCCe-----------------EEE
Q 004217 137 QTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD--FYRPI-----------------ASI 197 (767)
Q Consensus 137 ~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~--h~~~V-----------------tsV 197 (767)
.+++.. .+..|...+..++|+| |++.|+.+ .|+.|++||+.+++..+... +...+ ..+
T Consensus 100 ~~~~~~-~l~~~~~~~~~~~~SP-dG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~ 176 (740)
T 4a5s_A 100 NKRQLI-TEERIPNNTQWVTWSP-VGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSAL 176 (740)
T ss_dssp TTTEEC-CSSCCCTTEEEEEECS-STTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred CCCcEE-EcccCCCcceeeEECC-CCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcce
Confidence 999854 5677888899999999 88888887 47899999999887665422 22222 348
Q ss_pred EEcCCCCEEEEEEC-C------------------------------------cEEEEEcCC---CccccCCeEEe-----
Q 004217 198 AFHASGELLAVASG-H------------------------------------KLYIWRYNM---REETSSPRIVL----- 232 (767)
Q Consensus 198 afSPdG~~LAsgSd-d------------------------------------~V~VWDl~t---~~~~~~~~~l~----- 232 (767)
.|||||++||..+. + .|++||+.+ ++... ...+.
T Consensus 177 ~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~-~~~l~~~~~~ 255 (740)
T 4a5s_A 177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT-SIQITAPASM 255 (740)
T ss_dssp EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC-EEEECCCHHH
T ss_pred EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce-EEEecCCccC
Confidence 99999999998751 1 277888887 63111 11222
Q ss_pred -cCCCCeEEEEEccCCCeEEEE
Q 004217 233 -RTRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 233 -~h~~~VtsVaFSPDG~~LlaS 253 (767)
+|...+..++|+|||+.++..
T Consensus 256 ~~~~~~~~~~~wspdg~~~~~~ 277 (740)
T 4a5s_A 256 LIGDHYLCDVTWATQERISLQW 277 (740)
T ss_dssp HTSCEEEEEEEEEETTEEEEEE
T ss_pred CCCCeEEEEEEEeCCCeEEEEE
Confidence 377789999999999965544
No 154
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.53 E-value=2.3e-12 Score=137.23 Aligned_cols=174 Identities=10% Similarity=-0.034 Sum_probs=130.4
Q ss_pred EEEcCCCEEEEEeC-CC--eEEEEeCCCCC----CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccC
Q 004217 76 AGRDARRGLASWVE-AE--SLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH 148 (767)
Q Consensus 76 A~sd~g~~LaSgs~-Dg--sIrlWd~~t~~----L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH 148 (767)
+++.+++.|+..+. ++ .|.+||+.+++ ..++...+..+.|+|||++|+.++.++.|++||+.+++....+..+
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~ 121 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVP 121 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeech
Confidence 45678888887776 56 38888988763 2345555557889999999999999999999999999877777766
Q ss_pred CCCcEEEE--EccCCCcEEEEE----------------------eCCCeEEEEECCCCeEEEeecCCCCeEEEEEcC-CC
Q 004217 149 RRTPWVVR--FHPLNPTIIASG----------------------SLDHEVRLWNASTAECIGSRDFYRPIASIAFHA-SG 203 (767)
Q Consensus 149 ~~~V~sLa--fsP~dg~lLaSg----------------------S~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSP-dG 203 (767)
...+.... ++| ++.+++.. ..+..|.+||+.+++......+...+..++|+| +|
T Consensus 122 ~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg 200 (388)
T 3pe7_A 122 AEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDD 200 (388)
T ss_dssp TTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEE
T ss_pred hhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCC
Confidence 66554444 478 77777643 245789999999998777777778899999999 99
Q ss_pred CEEEEEECC-------cEEEEEcCCCccccCCeEEecCC--CCeEEEEEccCCCeEEEEE
Q 004217 204 ELLAVASGH-------KLYIWRYNMREETSSPRIVLRTR--RSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 204 ~~LAsgSdd-------~V~VWDl~t~~~~~~~~~l~~h~--~~VtsVaFSPDG~~LlaSg 254 (767)
+.|+....+ .|.++|+...+.. .+..+. ..+..+.|+|||+.|+..+
T Consensus 201 ~~l~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 201 STVAFCHEGPHDLVDARMWLINEDGTNMR----KVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp EEEEEEECSCTTTSSCSEEEEETTSCCCE----ESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred CEEEEEEecCCCCCcceEEEEeCCCCceE----EeeeCCCCcccccceECCCCCEEEEEe
Confidence 988877642 3888887765432 233333 3578899999999886644
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.53 E-value=1.3e-12 Score=160.03 Aligned_cols=176 Identities=10% Similarity=-0.002 Sum_probs=149.0
Q ss_pred eEEEEEE-cCCCEEEEEeCCCeEEEEeCCCC---CCCCCCC-CeEEEEECCCCCeEEEEeCCCeEE-EEECCCCeEEEEE
Q 004217 72 QIFEAGR-DARRGLASWVEAESLHHLRPKYC---PLSPPPR-STIAAAFSPDGKTLASTHGDHTVK-IIDCQTGSCLKVL 145 (767)
Q Consensus 72 ~~~vA~s-d~g~~LaSgs~DgsIrlWd~~t~---~L~gH~~-sVtsVaFSpDG~~LASgs~DGtVr-VWDl~tg~~l~~L 145 (767)
...++++ .+++.|+..+ ++.|.+|+...+ .+..|.. .+..++|+ ||+.|++++.+..+. +||+.+++.. .+
T Consensus 298 v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l 374 (1045)
T 1k32_A 298 KFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KF 374 (1045)
T ss_dssp GGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-EC
T ss_pred cceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-Ee
Confidence 3456677 8888888877 789999998876 3667777 89999999 999999999988899 9999887654 44
Q ss_pred ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEEC-C----------c
Q 004217 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG-H----------K 213 (767)
Q Consensus 146 ~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSd-d----------~ 213 (767)
.+|...+..++|+| ++++|++++.++.|++||+.+++..... .+...+..++|+|||++|++++. + .
T Consensus 375 ~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~ 453 (1045)
T 1k32_A 375 EENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA 453 (1045)
T ss_dssp CCCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEE
T ss_pred cCCccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCe
Confidence 58888999999999 9999999999999999999999888776 68888999999999999888763 2 4
Q ss_pred EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 214 LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 214 V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
|++||+.+++. ..+..|...+..++|+|||++|++.+.
T Consensus 454 i~l~d~~~g~~----~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 454 IHVYDMEGRKI----FAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEEETTTTEE----EECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred EEEEECCCCcE----EEeeCCCcccCCceEcCCCCEEEEEec
Confidence 99999988762 246678888999999999998887765
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.52 E-value=1.1e-12 Score=138.50 Aligned_cols=148 Identities=12% Similarity=0.162 Sum_probs=104.4
Q ss_pred CCCCCeEEEEECCCCCeEEEEeC---CCeEEEEECCCCe--EEEEEccCCCCcEEEEEccCCCcEEEEEe-CCCeEEEEE
Q 004217 105 PPPRSTIAAAFSPDGKTLASTHG---DHTVKIIDCQTGS--CLKVLHGHRRTPWVVRFHPLNPTIIASGS-LDHEVRLWN 178 (767)
Q Consensus 105 gH~~sVtsVaFSpDG~~LASgs~---DGtVrVWDl~tg~--~l~~L~gH~~~V~sLafsP~dg~lLaSgS-~DGtVrIWD 178 (767)
.+...+..++|+|||+ |++++. ++.|++||+.+++ .+..+..+...+..++|+| ++++|++++ .+++|.+||
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE-ARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET-TTTEEEEEETTTTEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC-CCCEEEEEeCCCCEEEEEE
Confidence 4556788899999999 555544 6899999998776 4455556778899999999 888777777 789999999
Q ss_pred CC-CCe--EEEeecCC----------CCeEEEEEcCCCCEEEEEEC-CcEEEEEcC-CCccccCCeEEe-cCCCCeEEEE
Q 004217 179 AS-TAE--CIGSRDFY----------RPIASIAFHASGELLAVASG-HKLYIWRYN-MREETSSPRIVL-RTRRSLRAVH 242 (767)
Q Consensus 179 l~-tg~--~i~~l~h~----------~~VtsVafSPdG~~LAsgSd-d~V~VWDl~-t~~~~~~~~~l~-~h~~~VtsVa 242 (767)
+. ++. .+..+.+. ..+.+++|+|+|+++++... +.|++||+. +++... ..... .....+..++
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSE-QSVLTMEAGFGPRHLV 193 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEE-EEEEECCTTCCEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEE-eeeEEcCCCCCCceEE
Confidence 96 333 23333221 24889999999995444443 449999998 343221 11112 2344678999
Q ss_pred EccCCCeEEEEEe
Q 004217 243 FHPHAAPLLLTAE 255 (767)
Q Consensus 243 FSPDG~~LlaSgs 255 (767)
|+|||++++++..
T Consensus 194 ~spdg~~l~v~~~ 206 (347)
T 3hfq_A 194 FSPDGQYAFLAGE 206 (347)
T ss_dssp ECTTSSEEEEEET
T ss_pred ECCCCCEEEEEeC
Confidence 9999998777653
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.51 E-value=4.6e-12 Score=134.59 Aligned_cols=180 Identities=11% Similarity=0.111 Sum_probs=124.2
Q ss_pred eEEEEEEcCCCEEEEEeCC----CeEEEEeCCC--CC------CCCCCCCeEEEEECCCCCeEEEEe-CCCeEEEEECCC
Q 004217 72 QIFEAGRDARRGLASWVEA----ESLHHLRPKY--CP------LSPPPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQT 138 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~D----gsIrlWd~~t--~~------L~gH~~sVtsVaFSpDG~~LASgs-~DGtVrVWDl~t 138 (767)
+..++++.+++.|++.+.+ +.|.+|++.. ++ ...+......+++ |+++|++++ .++.|.+|++..
T Consensus 52 p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~ 129 (361)
T 3scy_A 52 PSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQ 129 (361)
T ss_dssp CCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCT
T ss_pred CceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCC
Confidence 4446778889999988876 7999998764 32 2235567788888 888887776 588999999975
Q ss_pred CeEEEE------Ecc--------CCCCcEEEEEccCCCcEE-EEEeCCCeEEEEECCCCe-------E-------EEeec
Q 004217 139 GSCLKV------LHG--------HRRTPWVVRFHPLNPTII-ASGSLDHEVRLWNASTAE-------C-------IGSRD 189 (767)
Q Consensus 139 g~~l~~------L~g--------H~~~V~sLafsP~dg~lL-aSgS~DGtVrIWDl~tg~-------~-------i~~l~ 189 (767)
...+.. ..+ +...+.+++|+| +++++ ++...++.|++|++.... . .....
T Consensus 130 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~ 208 (361)
T 3scy_A 130 DGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA 208 (361)
T ss_dssp TSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC
T ss_pred CCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecC
Confidence 432211 111 122357899999 77755 555568999999887543 1 22234
Q ss_pred CCCCeEEEEEcCCCCEEEEEE--CCcEEEEEcCCCccccCCeEE---ecCCCCeEEEEEccCCCeEEEEEe
Q 004217 190 FYRPIASIAFHASGELLAVAS--GHKLYIWRYNMREETSSPRIV---LRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 190 h~~~VtsVafSPdG~~LAsgS--dd~V~VWDl~t~~~~~~~~~l---~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
....+..++|+|+|+++++++ ++.|.+||+.+++... .... ..+......++|+|||++|+++..
T Consensus 209 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~-~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 209 PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDE-IQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEE-EEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEE-eEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 566788999999999888887 3459999998664321 1111 223455789999999998876653
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.50 E-value=1.9e-13 Score=159.21 Aligned_cols=180 Identities=9% Similarity=0.058 Sum_probs=133.5
Q ss_pred eEEEEEEcCCCEEEEEeC---------CCeEEEEeCCCCCC---CCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCC
Q 004217 72 QIFEAGRDARRGLASWVE---------AESLHHLRPKYCPL---SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTG 139 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~---------DgsIrlWd~~t~~L---~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg 139 (767)
....+++.+|+.|+.++. ++.|++||+.+++. ......+..++|||||++|+++. |+.|++||+.++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g 140 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGD 140 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCC
Confidence 445778889999988876 78999999988865 44456799999999999999986 789999999988
Q ss_pred eEEEEE-ccCCCCc-----------------EEEEEccCCCcEEEEEeCCC-----------------------------
Q 004217 140 SCLKVL-HGHRRTP-----------------WVVRFHPLNPTIIASGSLDH----------------------------- 172 (767)
Q Consensus 140 ~~l~~L-~gH~~~V-----------------~sLafsP~dg~lLaSgS~DG----------------------------- 172 (767)
+..... .++...| ..++|+| |++.|++++.|.
T Consensus 141 ~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~ 219 (719)
T 1z68_A 141 PPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGA 219 (719)
T ss_dssp CCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTS
T ss_pred CcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCC
Confidence 765432 2333222 4899999 999999887652
Q ss_pred -----eEEEEECCCCeEE---Ee------ecCCCCeEEEEEcCCCCEEEEEEC--C---cEEEEE----cCCCccccCCe
Q 004217 173 -----EVRLWNASTAECI---GS------RDFYRPIASIAFHASGELLAVASG--H---KLYIWR----YNMREETSSPR 229 (767)
Q Consensus 173 -----tVrIWDl~tg~~i---~~------l~h~~~VtsVafSPdG~~LAsgSd--d---~V~VWD----l~t~~~~~~~~ 229 (767)
+|++||+.+++.. .. ..+...+..++|+||++++++..+ + .|++|| +.+++......
T Consensus 220 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~ 299 (719)
T 1z68_A 220 KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE 299 (719)
T ss_dssp CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE
T ss_pred CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEe
Confidence 7899999987752 21 136677899999999887777542 2 289999 77665433110
Q ss_pred -EEecCCCCeE-----EEEEccCCCeEEEE
Q 004217 230 -IVLRTRRSLR-----AVHFHPHAAPLLLT 253 (767)
Q Consensus 230 -~l~~h~~~Vt-----sVaFSPDG~~LlaS 253 (767)
....|...+. .+.|+|||+.++..
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 300 HIEESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp EEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred cccccCCceEccccCCccEECCCCCeEEEE
Confidence 0145666676 89999999977664
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.48 E-value=5.2e-13 Score=152.06 Aligned_cols=172 Identities=10% Similarity=0.037 Sum_probs=124.1
Q ss_pred eEEEEEEcCCCEEEEEeC-CCeEEEEeCCCC---CCCCCC-CCeEEEEECCCCCeEEEEeC---CCeEEEEECCC---Ce
Q 004217 72 QIFEAGRDARRGLASWVE-AESLHHLRPKYC---PLSPPP-RSTIAAAFSPDGKTLASTHG---DHTVKIIDCQT---GS 140 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~-DgsIrlWd~~t~---~L~gH~-~sVtsVaFSpDG~~LASgs~---DGtVrVWDl~t---g~ 140 (767)
...++++.+|+.|+..+. |+++++|++..+ ++..|. ..+..++|||| +++++++. +...+||.+.. +.
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~ 102 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGE 102 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCc
Confidence 445667789999998876 999999998765 355666 58999999999 77777765 45556654432 33
Q ss_pred EEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECC----c-EE
Q 004217 141 CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH----K-LY 215 (767)
Q Consensus 141 ~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd----~-V~ 215 (767)
.. .+... ..+...+|+|++...+++...++.+.+||+.+++......+.. .+++|+|||++|++++.+ . |+
T Consensus 103 ~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~ 178 (582)
T 3o4h_A 103 EQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLF 178 (582)
T ss_dssp CE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEE
T ss_pred cc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEE
Confidence 23 44332 2345678888333444444444555599999998776665444 789999999999977643 3 99
Q ss_pred EEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEE
Q 004217 216 IWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLL 252 (767)
Q Consensus 216 VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~Lla 252 (767)
+||+.+++.. .+..|...+..++|||||++|++
T Consensus 179 ~~d~~~g~~~----~l~~~~~~~~~~~~SpDG~~l~~ 211 (582)
T 3o4h_A 179 TSNLSSGGLR----VFDSGEGSFSSASISPGMKVTAG 211 (582)
T ss_dssp EEETTTCCCE----EECCSSCEEEEEEECTTSCEEEE
T ss_pred EEcCCCCCce----EeecCCCccccceECCCCCEEEE
Confidence 9999887642 46778888999999999998873
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.48 E-value=1.1e-12 Score=136.49 Aligned_cols=182 Identities=13% Similarity=0.096 Sum_probs=130.5
Q ss_pred eEEEEEEcCCCEEE-EEeCCCeEEEEeCCCCCC----C-CC-----CCCeEEEEECCCCCeEEEEeCC------------
Q 004217 72 QIFEAGRDARRGLA-SWVEAESLHHLRPKYCPL----S-PP-----PRSTIAAAFSPDGKTLASTHGD------------ 128 (767)
Q Consensus 72 ~~~vA~sd~g~~La-Sgs~DgsIrlWd~~t~~L----~-gH-----~~sVtsVaFSpDG~~LASgs~D------------ 128 (767)
...+++..+++.++ +...++.|.+||..+++. . .+ ...+.+++|+|||++|++++.+
T Consensus 45 ~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 124 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 124 (349)
T ss_dssp SCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCC
Confidence 44566667777554 555789999999987632 1 22 2337899999999999998865
Q ss_pred CeEEEEECCCCe---EEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCC-------------
Q 004217 129 HTVKIIDCQTGS---CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYR------------- 192 (767)
Q Consensus 129 GtVrVWDl~tg~---~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~------------- 192 (767)
+.|.+||+.+++ .+..+.. ...+.+++|+| +++ ++.++ +.|.+||+.+++.+..+....
T Consensus 125 ~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~-dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
T 1jmx_B 125 PRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAAD-DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY 199 (349)
T ss_dssp CEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECT-TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCC
T ss_pred CeEEEEECCCccccceeeeccC-CCcccceeECC-CCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCcccee
Confidence 899999998844 3344443 34688999999 777 44444 349999999988776643221
Q ss_pred --------------------------------------------------------CeEEEEEcC-CCCEEEEEECCcEE
Q 004217 193 --------------------------------------------------------PIASIAFHA-SGELLAVASGHKLY 215 (767)
Q Consensus 193 --------------------------------------------------------~VtsVafSP-dG~~LAsgSdd~V~ 215 (767)
.+..++|+| +|++++++ ++.|.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~ 278 (349)
T 1jmx_B 200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLA 278 (349)
T ss_dssp CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEE
T ss_pred eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEE
Confidence 345677889 99999888 66799
Q ss_pred EEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe-----eCCcCCCC
Q 004217 216 IWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE-----VNDLDSSE 263 (767)
Q Consensus 216 VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs-----vwdl~s~~ 263 (767)
+||+.+++... .+ .....+.+++|+|||++|++++. +||+...+
T Consensus 279 ~~d~~~~~~~~---~~-~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 279 KYDLKQRKLIK---AA-NLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp EEETTTTEEEE---EE-ECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred EEECccCeEEE---EE-cCCCCccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 99999877544 22 23456789999999998887543 55555443
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.47 E-value=1.7e-12 Score=153.29 Aligned_cols=144 Identities=10% Similarity=0.089 Sum_probs=112.8
Q ss_pred CeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCc-----EEEEEccCCCcEEEEEeCC---------CeE
Q 004217 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTP-----WVVRFHPLNPTIIASGSLD---------HEV 174 (767)
Q Consensus 109 sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V-----~sLafsP~dg~lLaSgS~D---------GtV 174 (767)
....++|+|||++|+++ |++|++||+.++++...+.+|.... ..+.|+| |++.|+.++.+ +.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEEccceEE
Confidence 35689999999999886 8999999999999888888876432 3478999 89999998876 556
Q ss_pred EEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECCcEEEEEcCCCccccCC------eEEecCCC---------CeE
Q 004217 175 RLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSP------RIVLRTRR---------SLR 239 (767)
Q Consensus 175 rIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t~~~~~~~------~~l~~h~~---------~Vt 239 (767)
.+||+.+++......+...+..++|||||+.||.+.++.|++||+.+++..+.. ....++.. ...
T Consensus 95 ~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 95 DIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp EEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred EEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCc
Confidence 799999999876666778899999999999999999888999999887643300 01112221 123
Q ss_pred EEEEccCCCeEEEEEe
Q 004217 240 AVHFHPHAAPLLLTAE 255 (767)
Q Consensus 240 sVaFSPDG~~LlaSgs 255 (767)
++.|||||++|+....
T Consensus 175 ~~~wSpDg~~la~~~~ 190 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQF 190 (740)
T ss_dssp CEEECTTSSEEEEEEE
T ss_pred ceEECCCCCEEEEEEE
Confidence 5899999998887653
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.45 E-value=1.6e-11 Score=130.39 Aligned_cols=179 Identities=12% Similarity=0.087 Sum_probs=122.6
Q ss_pred eEEEEEEcCCCEEEEEe-CCCeEEEEeCCCC-CCC-----------------CCCCCeEEEEECCCCCeEEEEe-CCCeE
Q 004217 72 QIFEAGRDARRGLASWV-EAESLHHLRPKYC-PLS-----------------PPPRSTIAAAFSPDGKTLASTH-GDHTV 131 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs-~DgsIrlWd~~t~-~L~-----------------gH~~sVtsVaFSpDG~~LASgs-~DGtV 131 (767)
...++. +++.|+... .++.|.+|++... .+. .+...+.+++|+|||++|++++ .++.|
T Consensus 102 p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v 179 (361)
T 3scy_A 102 PCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQI 179 (361)
T ss_dssp EEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred cEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEE
Confidence 444455 566666555 6889999998643 211 1123468899999999776655 48899
Q ss_pred EEEECCCCe-------E------EEEEccCCCCcEEEEEccCCCcEEEEEe-CCCeEEEEECCCCeEEEe--ec----CC
Q 004217 132 KIIDCQTGS-------C------LKVLHGHRRTPWVVRFHPLNPTIIASGS-LDHEVRLWNASTAECIGS--RD----FY 191 (767)
Q Consensus 132 rVWDl~tg~-------~------l~~L~gH~~~V~sLafsP~dg~lLaSgS-~DGtVrIWDl~tg~~i~~--l~----h~ 191 (767)
++|++.... . ......+...+..++|+| ++++++.++ .+++|.+||+.+++.... +. +.
T Consensus 180 ~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~ 258 (361)
T 3scy_A 180 HKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNA 258 (361)
T ss_dssp EEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCC
T ss_pred EEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCC
Confidence 999887533 1 112233455688999999 888766665 699999999997765322 21 23
Q ss_pred CCeEEEEEcCCCCEEEEEECC---cEEEEEcC--CCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 192 RPIASIAFHASGELLAVASGH---KLYIWRYN--MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 192 ~~VtsVafSPdG~~LAsgSdd---~V~VWDl~--t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
.....++|+|+|++|+++..+ .|.+|++. +++... ...... ...+..++|+|||++|+++..
T Consensus 259 ~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~-~~~~~~-g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 259 QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTK-VGYQLT-GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEE-EEEEEC-SSCCCEEEECTTSCEEEEEET
T ss_pred CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEE-eeEecC-CCCCceEEECCCCCEEEEEEC
Confidence 457899999999998777643 49999996 333211 112222 567889999999998888763
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.43 E-value=7.1e-12 Score=134.66 Aligned_cols=182 Identities=11% Similarity=0.045 Sum_probs=127.6
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCC-CCCCC---CCC--CCeEEEEECCCCCe--EEEEe-------------CCCe
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPK-YCPLS---PPP--RSTIAAAFSPDGKT--LASTH-------------GDHT 130 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~-t~~L~---gH~--~sVtsVaFSpDG~~--LASgs-------------~DGt 130 (767)
...++++.+++.|++.+.+ .|.+|++. ++++. .+. +.+..++|+|||++ ++++. .+++
T Consensus 42 ~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~ 120 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGY 120 (365)
T ss_dssp CSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCE
T ss_pred CcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCce
Confidence 4457778889999988888 99999986 55321 111 23566899999994 45553 6899
Q ss_pred EEEEECC-CCeEEEEEc----cCCCCcEEEEEccCCCcEEEEEe-CCCeEEEEECC-CCeEEE--eec---CCCCeEEEE
Q 004217 131 VKIIDCQ-TGSCLKVLH----GHRRTPWVVRFHPLNPTIIASGS-LDHEVRLWNAS-TAECIG--SRD---FYRPIASIA 198 (767)
Q Consensus 131 VrVWDl~-tg~~l~~L~----gH~~~V~sLafsP~dg~lLaSgS-~DGtVrIWDl~-tg~~i~--~l~---h~~~VtsVa 198 (767)
+++|++. +++....+. .+...+.+++|+| ++++++++. .++.|++||+. +++... .+. +...+..++
T Consensus 121 v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~ 199 (365)
T 1jof_A 121 GNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVA 199 (365)
T ss_dssp EEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEE
T ss_pred EEEEccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeE
Confidence 9999997 466544443 2556799999999 888777665 47899999998 776532 232 356789999
Q ss_pred EcCCCCEEEEEEC--CcEEEEEcCC--CccccCCeEEe-------cCCC------CeEEEE-EccCCCeEEEEEe
Q 004217 199 FHASGELLAVASG--HKLYIWRYNM--REETSSPRIVL-------RTRR------SLRAVH-FHPHAAPLLLTAE 255 (767)
Q Consensus 199 fSPdG~~LAsgSd--d~V~VWDl~t--~~~~~~~~~l~-------~h~~------~VtsVa-FSPDG~~LlaSgs 255 (767)
|+|+|++|++++. +.|.+|+++. ++.......+. +|.. .+..++ |+|||++|+++..
T Consensus 200 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 200 MHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred ECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 9999999988874 4499998763 43210000111 1222 588999 9999998876654
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.41 E-value=1.1e-11 Score=131.94 Aligned_cols=219 Identities=12% Similarity=0.096 Sum_probs=146.2
Q ss_pred CCCCCCCCeEE-----EEECCCCCeEEEEeC-CC--eEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCe
Q 004217 102 PLSPPPRSTIA-----AAFSPDGKTLASTHG-DH--TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHE 173 (767)
Q Consensus 102 ~L~gH~~sVts-----VaFSpDG~~LASgs~-DG--tVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGt 173 (767)
++..|...... .+|||||++|+.++. ++ .|.+||+.+++......++...+..+.|+| +++.|+.++.++.
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp-dg~~l~~~~~~~~ 103 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP-DDDALFYVKDGRN 103 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT-TSSEEEEEETTTE
T ss_pred EecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC-CCCEEEEEeCCCe
Confidence 35556655655 899999999999887 66 488899999987777777766666788999 9999999999999
Q ss_pred EEEEECCCCeEEEeecCC-CCeEEE--EEcCCCCEEEEEE----------------------C-CcEEEEEcCCCccccC
Q 004217 174 VRLWNASTAECIGSRDFY-RPIASI--AFHASGELLAVAS----------------------G-HKLYIWRYNMREETSS 227 (767)
Q Consensus 174 VrIWDl~tg~~i~~l~h~-~~VtsV--afSPdG~~LAsgS----------------------d-d~V~VWDl~t~~~~~~ 227 (767)
|++||+.+++........ ..+... .++|+|++++... . ..|++||+.+++..
T Consensus 104 l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-- 181 (388)
T 3pe7_A 104 LMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-- 181 (388)
T ss_dssp EEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE--
T ss_pred EEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE--
Confidence 999999999877665533 334333 3489999887432 1 23999999987642
Q ss_pred CeEEecCCCCeEEEEEcc-CCCeEEEEEee-CCcCCCCcceeEeecCCCccCCCCeEEEecCCCCCCCceeeccCCCCCC
Q 004217 228 PRIVLRTRRSLRAVHFHP-HAAPLLLTAEV-NDLDSSESSLTLATSPGYWRYPPPVICMAGAHSSSHPGLAEEVPLITPP 305 (767)
Q Consensus 228 ~~~l~~h~~~VtsVaFSP-DG~~LlaSgsv-wdl~s~~~~~~l~t~sG~~~~p~~~v~l~~~~Ssd~~~L~sg~~~~slp 305 (767)
.+..+...+..+.|+| ||+.|+..... ++- ....+.+.+........+.... ....
T Consensus 182 --~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~------------------~~~~l~~~d~~~~~~~~l~~~~--~~~~ 239 (388)
T 3pe7_A 182 --VILQENQWLGHPIYRPYDDSTVAFCHEGPHDL------------------VDARMWLINEDGTNMRKVKTHA--EGES 239 (388)
T ss_dssp --EEEEESSCEEEEEEETTEEEEEEEEECSCTTT------------------SSCSEEEEETTSCCCEESCCCC--TTEE
T ss_pred --EeecCCccccccEECCCCCCEEEEEEecCCCC------------------CcceEEEEeCCCCceEEeeeCC--CCcc
Confidence 3456677899999999 99988776641 110 0112333332222222221110 0012
Q ss_pred ceeeEEecCCCEEEEeecCCCCCCcccccccccCCceeeeeccCCCCceeee
Q 004217 306 FLRPSFVRDDERISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSGQYELV 357 (767)
Q Consensus 306 il~psFSpDg~rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~q~~~~ 357 (767)
+..+.|+|||++|+...... ......+..||.++++...+
T Consensus 240 ~~~~~~spdg~~l~~~~~~~------------~~~~~~l~~~d~~~g~~~~l 279 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLK------------GSPDRFIYSADPETLENRQL 279 (388)
T ss_dssp EEEEEECTTSSCEEEEEEET------------TCCCEEEEEECTTTCCEEEE
T ss_pred cccceECCCCCEEEEEecCC------------CCCcceEEEEecCCCceEEE
Confidence 33689999999987633221 11223588899888776544
No 165
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.35 E-value=5.1e-12 Score=143.87 Aligned_cols=168 Identities=10% Similarity=0.012 Sum_probs=125.2
Q ss_pred EEEEcCC-CEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCeEEEEeCC----CeEEEEECCCCeEEEEEc
Q 004217 75 EAGRDAR-RGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGD----HTVKIIDCQTGSCLKVLH 146 (767)
Q Consensus 75 vA~sd~g-~~LaSgs~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~LASgs~D----GtVrVWDl~tg~~l~~L~ 146 (767)
.+++.++ ..++....++.+.+||+.+++ +..+.. .+++|||||++|++++.| ..|++||+.+++.. .+.
T Consensus 115 ~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~ 191 (582)
T 3o4h_A 115 LSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFD 191 (582)
T ss_dssp EEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EEC
T ss_pred eeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Eee
Confidence 3444444 333333444445599998763 333333 889999999999988877 78999999988754 678
Q ss_pred cCCCCcEEEEEccCCCcEEEEEeCCC--eEEEEECCCCeEEEeecCCCCeEEEE--------EcCCCCEEEEEECCc-EE
Q 004217 147 GHRRTPWVVRFHPLNPTIIASGSLDH--EVRLWNASTAECIGSRDFYRPIASIA--------FHASGELLAVASGHK-LY 215 (767)
Q Consensus 147 gH~~~V~sLafsP~dg~lLaSgS~DG--tVrIWDl~tg~~i~~l~h~~~VtsVa--------fSPdG~~LAsgSdd~-V~ 215 (767)
.|...+..++|+| |++.|+++..|+ .|++||+.+++......+...+..++ |+|||.++++++.++ ++
T Consensus 192 ~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~ 270 (582)
T 3o4h_A 192 SGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSA 270 (582)
T ss_dssp CSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEE
T ss_pred cCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEE
Confidence 8989999999999 899999888888 89999999988873234555566666 999998888887554 99
Q ss_pred EEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 216 IWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 216 VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
+|++ ++... .....|.+++|+ |++.+++.++
T Consensus 271 l~~~--g~~~~------~~~~~v~~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 271 VFID--GERVE------APQGNHGRVVLW-RGKLVTSHTS 301 (582)
T ss_dssp EEET--TEEEC------CCSSEEEEEEEE-TTEEEEEEEE
T ss_pred EEEE--CCeec------cCCCceEEEEec-CCEEEEEEcC
Confidence 9999 44322 334678999999 8886655443
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.33 E-value=9.9e-11 Score=125.70 Aligned_cols=147 Identities=14% Similarity=0.068 Sum_probs=107.0
Q ss_pred CCCCeEEEEECCCCCeEEEEeCCCeEEEEECC-CCeEEEEEccC-CCCcEEEEEccCCCcE--EEEEe------------
Q 004217 106 PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQ-TGSCLKVLHGH-RRTPWVVRFHPLNPTI--IASGS------------ 169 (767)
Q Consensus 106 H~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~-tg~~l~~L~gH-~~~V~sLafsP~dg~l--LaSgS------------ 169 (767)
....+..++|+|||++|++++.+ .|.+||+. +++........ .+.+..++|+| ++++ ++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT-NTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC-CCCEEEEEEecCCcceeccceee
Confidence 33468899999999999999888 99999997 78765433211 13366789999 7773 44553
Q ss_pred -CCCeEEEEECC-CCeEEEeec-----CCCCeEEEEEcCCCCEEEEEEC--CcEEEEEcC-CCccccCCeEEe--cCCCC
Q 004217 170 -LDHEVRLWNAS-TAECIGSRD-----FYRPIASIAFHASGELLAVASG--HKLYIWRYN-MREETSSPRIVL--RTRRS 237 (767)
Q Consensus 170 -~DGtVrIWDl~-tg~~i~~l~-----h~~~VtsVafSPdG~~LAsgSd--d~V~VWDl~-t~~~~~~~~~l~--~h~~~ 237 (767)
.++++.+|++. +++....+. +...+.+++|+|+|++|+++.. +.|++||+. +++... ..... .|...
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~g~~ 194 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL-VGSVDAPDPGDH 194 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE-EEEEECSSTTCC
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEE-eeeEecCCCCCC
Confidence 68999999997 466544332 4567999999999999888763 459999998 555321 11222 24567
Q ss_pred eEEEEEccCCCeEEEEEe
Q 004217 238 LRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 238 VtsVaFSPDG~~LlaSgs 255 (767)
+..++|+|||++++++..
T Consensus 195 p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 195 PRWVAMHPTGNYLYALME 212 (365)
T ss_dssp EEEEEECTTSSEEEEEET
T ss_pred CCEeEECCCCCEEEEEEC
Confidence 999999999998877653
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.33 E-value=5.3e-10 Score=118.62 Aligned_cols=174 Identities=12% Similarity=0.086 Sum_probs=128.1
Q ss_pred eEEEEEEcCCCEEEEEeCC------------------------CeEEEEeCCCCCCC-----CCCCCeEEEEECCCCCeE
Q 004217 72 QIFEAGRDARRGLASWVEA------------------------ESLHHLRPKYCPLS-----PPPRSTIAAAFSPDGKTL 122 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~D------------------------gsIrlWd~~t~~L~-----gH~~sVtsVaFSpDG~~L 122 (767)
+..+++..++..+++...+ +.|.+||..++++. ++......++++++|+++
T Consensus 26 v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~ 105 (329)
T 3fvz_A 26 VSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYW 105 (329)
T ss_dssp EEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEE
T ss_pred ceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEE
Confidence 5557777778877777766 47999999876432 455678999999999988
Q ss_pred EEEeCCCeEEEEECCCCe-EEEEE---------ccCCCCcEEEEEccCCCcEEEEEe-CCCeEEEEECCCCeEEEeecCC
Q 004217 123 ASTHGDHTVKIIDCQTGS-CLKVL---------HGHRRTPWVVRFHPLNPTIIASGS-LDHEVRLWNASTAECIGSRDFY 191 (767)
Q Consensus 123 ASgs~DGtVrVWDl~tg~-~l~~L---------~gH~~~V~sLafsP~dg~lLaSgS-~DGtVrIWDl~tg~~i~~l~h~ 191 (767)
++...++.|++||..... .+..+ .++...+..++|+|.+++++++.+ .++.|++|| .+++.+..+...
T Consensus 106 v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~ 184 (329)
T 3fvz_A 106 VTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEE 184 (329)
T ss_dssp EEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEE
T ss_pred EEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccC
Confidence 888889999999986542 45555 344557899999996788888886 699999999 567777665421
Q ss_pred -----------CCeEEEEEcCC-CCEEEEEEC-CcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCC
Q 004217 192 -----------RPIASIAFHAS-GELLAVASG-HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAA 248 (767)
Q Consensus 192 -----------~~VtsVafSPd-G~~LAsgSd-d~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~ 248 (767)
.....++++|+ |+++++... ++|++||..+++.+. ......+...+.+++|+| +.
T Consensus 185 g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~p-g~ 252 (329)
T 3fvz_A 185 SSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVR-EIKHASFGRNVFAISYIP-GF 252 (329)
T ss_dssp CCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-EECCTTTTTCEEEEEEET-TE
T ss_pred CCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEE-EEeccccCCCcceeeecC-CE
Confidence 23789999999 555555444 449999998776544 111134567889999999 54
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.32 E-value=3.2e-11 Score=128.06 Aligned_cols=174 Identities=7% Similarity=-0.009 Sum_probs=120.7
Q ss_pred EEEcCCCEEEEEeCC---CeEEEEeCCCCC---CCCCCCCe-EEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccC
Q 004217 76 AGRDARRGLASWVEA---ESLHHLRPKYCP---LSPPPRST-IAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH 148 (767)
Q Consensus 76 A~sd~g~~LaSgs~D---gsIrlWd~~t~~---L~gH~~sV-tsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH 148 (767)
+++.+|+.|+..... ..|.+|+..+++ +..+...+ ..+.|+|||++|+.++.++.|++||+.+++....+..+
T Consensus 42 ~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~ 121 (396)
T 3c5m_A 42 CFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVD 121 (396)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred cCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecc
Confidence 344567776655432 368888887763 43333333 34889999999999999999999999998866666545
Q ss_pred CCCcEE-------------------EEEccCCCcEEEEE-----eCCCeEEEEECCCCeEEEeecCCCCeEEEEEcC-CC
Q 004217 149 RRTPWV-------------------VRFHPLNPTIIASG-----SLDHEVRLWNASTAECIGSRDFYRPIASIAFHA-SG 203 (767)
Q Consensus 149 ~~~V~s-------------------LafsP~dg~lLaSg-----S~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSP-dG 203 (767)
...... +.|+| +++.++.. ..+..|.+||+.+++......+...+..+.|+| +|
T Consensus 122 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg 200 (396)
T 3c5m_A 122 EEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDD 200 (396)
T ss_dssp TTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEE
T ss_pred cccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCC
Confidence 442222 24566 55544433 356789999999988777777778899999999 88
Q ss_pred CEEEEEEC-------CcEEEEEcCCCccccCCeEEecC--CCCeEEEEEccCCCeEEEEE
Q 004217 204 ELLAVASG-------HKLYIWRYNMREETSSPRIVLRT--RRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 204 ~~LAsgSd-------d~V~VWDl~t~~~~~~~~~l~~h--~~~VtsVaFSPDG~~LlaSg 254 (767)
+.|+..++ ..|.+||+..++... +..+ ...+..+.|+|||++|+..+
T Consensus 201 ~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~----l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (396)
T 3c5m_A 201 STVGFCHEGPHDLVDARMWLVNEDGSNVRK----IKEHAEGESCTHEFWIPDGSAMAYVS 256 (396)
T ss_dssp EEEEEEECSCSSSCSCCCEEEETTSCCCEE----SSCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred CEEEEEecCCCCCCCceEEEEECCCCceeE----eeccCCCccccceEECCCCCEEEEEe
Confidence 87776653 248888887654322 2222 23588899999999887763
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.27 E-value=1e-10 Score=134.78 Aligned_cols=180 Identities=12% Similarity=0.043 Sum_probs=126.2
Q ss_pred EEEEEEcCCCEEEEE--eCCCeEEEEeCCC-C---CCCCCCCCeE---------EEEEC--CCCCe-EEEEeC-CCeEEE
Q 004217 73 IFEAGRDARRGLASW--VEAESLHHLRPKY-C---PLSPPPRSTI---------AAAFS--PDGKT-LASTHG-DHTVKI 133 (767)
Q Consensus 73 ~~vA~sd~g~~LaSg--s~DgsIrlWd~~t-~---~L~gH~~sVt---------sVaFS--pDG~~-LASgs~-DGtVrV 133 (767)
...+++.++..+++. .+++...+|.... + ++..|...+. ...|+ |||++ |+.++. +..|.+
T Consensus 27 ~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~ 106 (662)
T 3azo_A 27 ACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYA 106 (662)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEE
T ss_pred ceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEE
Confidence 334454444445555 4577888898532 2 4667776666 66666 99998 776654 566777
Q ss_pred EECC--C-CeEEEEEcc-----CCCCcEEEEEccCCCcEEEEEeCC----------CeEEEEECCC------CeEEEee-
Q 004217 134 IDCQ--T-GSCLKVLHG-----HRRTPWVVRFHPLNPTIIASGSLD----------HEVRLWNAST------AECIGSR- 188 (767)
Q Consensus 134 WDl~--t-g~~l~~L~g-----H~~~V~sLafsP~dg~lLaSgS~D----------GtVrIWDl~t------g~~i~~l- 188 (767)
|++. + ++ ...+.. |...+..++|+| |++.|++++.| .+|++||+.+ ++.....
T Consensus 107 ~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~ 184 (662)
T 3azo_A 107 FEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSD 184 (662)
T ss_dssp ECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSC
T ss_pred EcCCCCCCCC-CEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEe
Confidence 7765 3 43 455655 667788999999 88999888877 5899999998 6665555
Q ss_pred cCCCCeEEEEEcCCCCEEEEEE-CC--------cEEEEEcC-CCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 189 DFYRPIASIAFHASGELLAVAS-GH--------KLYIWRYN-MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 189 ~h~~~VtsVafSPdG~~LAsgS-dd--------~V~VWDl~-t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
.+...+..++|+|||++|+.++ ++ .|++||+. ++...........|...+..+.|+|||+ +++++.
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~ 260 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATD 260 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEEC
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEEC
Confidence 5566788899999999998776 32 39999998 4521111123344578899999999999 555543
No 170
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.20 E-value=2.5e-09 Score=110.58 Aligned_cols=179 Identities=14% Similarity=0.037 Sum_probs=126.6
Q ss_pred eEEEEEEcCCC-EEEEEeCCCeEEEEeCCCC--CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccC
Q 004217 72 QIFEAGRDARR-GLASWVEAESLHHLRPKYC--PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH 148 (767)
Q Consensus 72 ~~~vA~sd~g~-~LaSgs~DgsIrlWd~~t~--~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH 148 (767)
....++..++. .+++...++.|..|+..++ .+..+...+.+++|+++|+++++...++.|.+||..+++........
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~ 109 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSF 109 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEE
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeecc
Confidence 34456666666 7788888999999998875 23456678999999999998888777889999999888755443221
Q ss_pred ----CCCcEEEEEccCCCcEEEEE----e-------------CCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEE
Q 004217 149 ----RRTPWVVRFHPLNPTIIASG----S-------------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLA 207 (767)
Q Consensus 149 ----~~~V~sLafsP~dg~lLaSg----S-------------~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LA 207 (767)
...+..++++| +++++++. . ..+.|..+|.. ++.............++|+|+|++|+
T Consensus 110 ~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv 187 (296)
T 3e5z_A 110 EGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLV 187 (296)
T ss_dssp TTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEE
T ss_pred CCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEE
Confidence 23567899999 88888873 2 13456666655 55544455666788999999999885
Q ss_pred EEEC-CcEEEEEcC-CCcc-ccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 004217 208 VASG-HKLYIWRYN-MREE-TSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 208 sgSd-d~V~VWDl~-t~~~-~~~~~~l~~h~~~VtsVaFSPDG~~LlaS 253 (767)
+.+. +.|++||+. .++. .. ...+..+...+..++++++|+.++++
T Consensus 188 ~~~~~~~i~~~~~~~~g~~~~~-~~~~~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 188 SDTGDNATHRYCLNARGETEYQ-GVHFTVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp EETTTTEEEEEEECSSSCEEEE-EEEECCSSSCCCSEEEBTTSCEEEEE
T ss_pred EeCCCCeEEEEEECCCCcCcCC-CeEeeCCCCCCCeEEECCCCCEEEEc
Confidence 5544 459999997 3332 11 11223345567889999999855554
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.18 E-value=1.2e-08 Score=104.65 Aligned_cols=175 Identities=10% Similarity=0.076 Sum_probs=127.6
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC---C------CCCCCCeEEEEE-CCCCCeEEEEeC-CCeEEEEECCCCe
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP---L------SPPPRSTIAAAF-SPDGKTLASTHG-DHTVKIIDCQTGS 140 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~---L------~gH~~sVtsVaF-SpDG~~LASgs~-DGtVrVWDl~tg~ 140 (767)
+..++...++..+++...++.|.+||..... + .+|...+.++++ .++++++++... ++.|++|| .+++
T Consensus 32 p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~ 110 (286)
T 1q7f_A 32 PSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQ 110 (286)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSC
T ss_pred CceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCc
Confidence 5556676777777777888999999987432 1 234567899999 567777776643 88999999 6677
Q ss_pred EEEEEc-cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec---CCCCeEEEEEcCCCCEEEEEE-CCcEE
Q 004217 141 CLKVLH-GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHASGELLAVAS-GHKLY 215 (767)
Q Consensus 141 ~l~~L~-gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~---h~~~VtsVafSPdG~~LAsgS-dd~V~ 215 (767)
.+..+. .+...+..++++| +++++++...++.|.+||.. ++.+..+. +...+..++++++|+++++.. ++.|+
T Consensus 111 ~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~ 188 (286)
T 1q7f_A 111 FVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVK 188 (286)
T ss_dssp EEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred EEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEE
Confidence 777664 3446789999999 78888888889999999964 55555553 345689999999999777665 45699
Q ss_pred EEEcCCCccccCCeEEec--CCCCeEEEEEccCCCeEEEE
Q 004217 216 IWRYNMREETSSPRIVLR--TRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 216 VWDl~t~~~~~~~~~l~~--h~~~VtsVaFSPDG~~LlaS 253 (767)
+||.... .+. .+.. +...+..++++++|+.+++.
T Consensus 189 ~~~~~g~-~~~---~~~~~g~~~~p~~i~~d~~G~l~v~~ 224 (286)
T 1q7f_A 189 VFNYEGQ-YLR---QIGGEGITNYPIGVGINSNGEILIAD 224 (286)
T ss_dssp EEETTCC-EEE---EESCTTTSCSEEEEEECTTCCEEEEE
T ss_pred EEcCCCC-EEE---EEccCCccCCCcEEEECCCCCEEEEe
Confidence 9997543 222 2222 23578999999999855544
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.18 E-value=6.3e-10 Score=128.09 Aligned_cols=177 Identities=14% Similarity=0.037 Sum_probs=129.3
Q ss_pred eEEEEEEcCCCEEEEEeCC----------CeEEEEeCCC------C---CCC-CCCCCeEEEEECCCCCeEEEEeCC---
Q 004217 72 QIFEAGRDARRGLASWVEA----------ESLHHLRPKY------C---PLS-PPPRSTIAAAFSPDGKTLASTHGD--- 128 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~D----------gsIrlWd~~t------~---~L~-gH~~sVtsVaFSpDG~~LASgs~D--- 128 (767)
....+++.+++.|+..+.+ ..|.+|++.+ + .+. .+...+..++|||||++|+.++.+
T Consensus 132 ~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~ 211 (662)
T 3azo_A 132 WADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPR 211 (662)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTC
T ss_pred ccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCC
Confidence 4567788999999988876 5899999987 5 355 666778899999999999988765
Q ss_pred -----CeEEEEECC-CC---eEEEEEccCCCCcEEEEEccCCCcEEEEEeCCC--eEEEEECCCCeEEEeecCCCC----
Q 004217 129 -----HTVKIIDCQ-TG---SCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDH--EVRLWNASTAECIGSRDFYRP---- 193 (767)
Q Consensus 129 -----GtVrVWDl~-tg---~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DG--tVrIWDl~tg~~i~~l~h~~~---- 193 (767)
..|++||+. ++ +......+|...+..+.|+| ++++++++..|+ .|.+||+.+++......+...
T Consensus 212 ~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p 290 (662)
T 3azo_A 212 MPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGP 290 (662)
T ss_dssp CTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCC
T ss_pred CCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCc
Confidence 379999999 57 44444555678899999999 777888888888 677777767776555433221
Q ss_pred -----eEEEEEcCCCCEEEEEECCcEEEE--EcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 194 -----IASIAFHASGELLAVASGHKLYIW--RYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 194 -----VtsVafSPdG~~LAsgSdd~V~VW--Dl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
+..++|+|+++++++++.+.++|| |+.+++. ..+..|...+..+ |+++++.++.++
T Consensus 291 ~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~----~~l~~~~~~~~~~-~s~~~~~~~~~~ 353 (662)
T 3azo_A 291 LWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGEL----VDAAGPWTEWAAT-LTVSGTRAVGVA 353 (662)
T ss_dssp CCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEE----EECCSSCCEEEEE-EEEETTEEEEEE
T ss_pred cccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcE----EEecCCCCeEEEE-EecCCCEEEEEE
Confidence 467899999999999888337777 5554442 2455566667766 255666555443
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.18 E-value=1.1e-08 Score=107.13 Aligned_cols=181 Identities=8% Similarity=-0.044 Sum_probs=126.5
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCCCC----CCCCCeEEEEECCCCCeEEEEeCC----CeEEEEECCCCeEEE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCPLS----PPPRSTIAAAFSPDGKTLASTHGD----HTVKIIDCQTGSCLK 143 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~L~----gH~~sVtsVaFSpDG~~LASgs~D----GtVrVWDl~tg~~l~ 143 (767)
....++..++..+++...++.|.+||..++++. .+...+.+++|+++|+++++...+ +.|.+||.++++...
T Consensus 47 ~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 47 LEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQD 126 (333)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEE
T ss_pred ccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEE
Confidence 344556667776777888999999999876422 466789999999999988877766 689999998877554
Q ss_pred EEc--cCCCCcEEEEEccCCCcEEEEEeC------CCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEE--CCc
Q 004217 144 VLH--GHRRTPWVVRFHPLNPTIIASGSL------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS--GHK 213 (767)
Q Consensus 144 ~L~--gH~~~V~sLafsP~dg~lLaSgS~------DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgS--dd~ 213 (767)
.+. .+...+..+.++| +++++++... .+.|..||..+++..........+..++|+|+|++|+++. ++.
T Consensus 127 ~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~ 205 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR 205 (333)
T ss_dssp EECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE
T ss_pred EEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCe
Confidence 443 2445789999999 7888887654 3567777766655544433345678999999999776655 355
Q ss_pred EEEEEcCC-CccccCC--eEEec--CCCCeEEEEEccCCCeEEEE
Q 004217 214 LYIWRYNM-REETSSP--RIVLR--TRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 214 V~VWDl~t-~~~~~~~--~~l~~--h~~~VtsVaFSPDG~~LlaS 253 (767)
|++||+++ +...... ..... ....+..++++++|+.++++
T Consensus 206 i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~ 250 (333)
T 2dg1_A 206 LHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAM 250 (333)
T ss_dssp EEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEE
T ss_pred EEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEE
Confidence 99999964 2221100 01111 11467889999999865554
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.16 E-value=3.1e-09 Score=124.64 Aligned_cols=179 Identities=10% Similarity=0.012 Sum_probs=123.8
Q ss_pred eEEEEEEcCCCEEEEEeCCC-----eEEEEeCCCCCCC---CCCCCeEEEEECCCCCeEEEEeCCCe-------------
Q 004217 72 QIFEAGRDARRGLASWVEAE-----SLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLASTHGDHT------------- 130 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~Dg-----sIrlWd~~t~~L~---gH~~sVtsVaFSpDG~~LASgs~DGt------------- 130 (767)
....+++.+++.|+....++ .|++||+.+++.. .....+..++|+|||+.|+.++.++.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~ 206 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNL 206 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCC
Confidence 45567788888888665433 8999999987432 11223678999999999999988766
Q ss_pred ---EEEEECCCCeE--EEEEc--cCCCCcEEEEEccCCCcEEEEEeC-----CCeEEEEECCC------C--eEEEeecC
Q 004217 131 ---VKIIDCQTGSC--LKVLH--GHRRTPWVVRFHPLNPTIIASGSL-----DHEVRLWNAST------A--ECIGSRDF 190 (767)
Q Consensus 131 ---VrVWDl~tg~~--l~~L~--gH~~~V~sLafsP~dg~lLaSgS~-----DGtVrIWDl~t------g--~~i~~l~h 190 (767)
|++|++.+++. ...+. .|...+..+.|+| ++++|+..+. +..|++||+.+ + .......+
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~ 285 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC
Confidence 99999988752 22333 3556678999999 8887777664 67899999986 4 23333444
Q ss_pred CCCeEEEEEcCCCCEEEEEEC-C----cEEEEEcCCCccccCCeEEecCCC--CeEEEEEccCCCeEEEEE
Q 004217 191 YRPIASIAFHASGELLAVASG-H----KLYIWRYNMREETSSPRIVLRTRR--SLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 191 ~~~VtsVafSPdG~~LAsgSd-d----~V~VWDl~t~~~~~~~~~l~~h~~--~VtsVaFSPDG~~LlaSg 254 (767)
...+.. .|+|+|+.|+..++ + .|.+||+.++.... ...+..|.. .+..++|++++. ++++.
T Consensus 286 ~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~-lv~~~ 353 (710)
T 2xdw_A 286 FEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESK-WKVLVPEHEKDVLEWVACVRSNF-LVLCY 353 (710)
T ss_dssp SSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGG-CEEEECCCSSCEEEEEEEETTTE-EEEEE
T ss_pred CCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccc-ceeccCCCCCCeEEEEEEEcCCE-EEEEE
Confidence 455544 58899998777663 2 29999998764211 234555544 688899996655 55544
No 175
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.14 E-value=9.6e-09 Score=109.27 Aligned_cols=172 Identities=9% Similarity=0.010 Sum_probs=126.8
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCCCC---CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCC-----C
Q 004217 79 DARRGLASWVEAESLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR-----R 150 (767)
Q Consensus 79 d~g~~LaSgs~DgsIrlWd~~t~~L~---gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~-----~ 150 (767)
++++..++...++.|.+||..+.++. ........++++++++++++...++.|.+||..+++....+.... .
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~ 131 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESG 131 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCC
Confidence 34555555556789999999987532 244678999999998555554489999999999999887775433 1
Q ss_pred CcEEEEEccCCCcEEEEEe-CCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEEC-----------CcEEEEE
Q 004217 151 TPWVVRFHPLNPTIIASGS-LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG-----------HKLYIWR 218 (767)
Q Consensus 151 ~V~sLafsP~dg~lLaSgS-~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSd-----------d~V~VWD 218 (767)
....+++ . ++.++++.. .+++|.+||+.+++.+..+........++++|+|++++++.. +.|.+||
T Consensus 132 ~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id 209 (328)
T 3dsm_A 132 STEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRID 209 (328)
T ss_dssp BCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEE
T ss_pred CcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEE
Confidence 4567777 4 566666655 489999999999998888776666778999999997777654 3599999
Q ss_pred cCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 219 YNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 219 l~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
..+.+... ............++|+||+++|.++.
T Consensus 210 ~~t~~v~~--~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 210 AETFTVEK--QFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp TTTTEEEE--EEECCTTCCCEEEEECTTSCEEEEES
T ss_pred CCCCeEEE--EEecCCCCCceeEEEecCCCEEEEEc
Confidence 98877543 11122234789999999999877654
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.14 E-value=1e-08 Score=104.98 Aligned_cols=174 Identities=13% Similarity=0.091 Sum_probs=124.4
Q ss_pred eEEEEEEcCCCEEEEEeC--CCeEEEEeCCCCC---C-CCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEE
Q 004217 72 QIFEAGRDARRGLASWVE--AESLHHLRPKYCP---L-SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVL 145 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~--DgsIrlWd~~t~~---L-~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L 145 (767)
+..+++.+....++.... ++.|.+|+..... + ..+...+.+++++++|+++++...++.|++||.. ++.+..+
T Consensus 79 p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~ 157 (286)
T 1q7f_A 79 PNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKF 157 (286)
T ss_dssp EEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred ceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEe
Confidence 455666444444444443 7899999954432 2 2344678999999999988888888999999964 6666666
Q ss_pred c--cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecC---CCCeEEEEEcCCCCEEEEEEC-C-cEEEEE
Q 004217 146 H--GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF---YRPIASIAFHASGELLAVASG-H-KLYIWR 218 (767)
Q Consensus 146 ~--gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h---~~~VtsVafSPdG~~LAsgSd-d-~V~VWD 218 (767)
. ++...+..+++++ +++++++...++.|++||.. ++.+..+.. ...+..++++++|+++++... + +|.+||
T Consensus 158 ~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~ 235 (286)
T 1q7f_A 158 GCSKHLEFPNGVVVND-KQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT 235 (286)
T ss_dssp ECTTTCSSEEEEEECS-SSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred CCCCccCCcEEEEECC-CCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEEC
Confidence 4 4456789999999 88888888889999999974 555555543 257899999999998887764 3 699999
Q ss_pred cCCCccccCCeEEecC--CCCeEEEEEccCCCeEEE
Q 004217 219 YNMREETSSPRIVLRT--RRSLRAVHFHPHAAPLLL 252 (767)
Q Consensus 219 l~t~~~~~~~~~l~~h--~~~VtsVaFSPDG~~Lla 252 (767)
.. ++.+. .+..+ ...+.+++|+|+|+.+++
T Consensus 236 ~~-g~~~~---~~~~~~~~~~~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 236 QD-GQLIS---ALESKVKHAQCFDVALMDDGSVVLA 267 (286)
T ss_dssp TT-SCEEE---EEEESSCCSCEEEEEEETTTEEEEE
T ss_pred CC-CCEEE---EEcccCCCCcceeEEECCCCcEEEE
Confidence 64 33322 23333 234789999999984443
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.14 E-value=3.2e-10 Score=120.28 Aligned_cols=142 Identities=10% Similarity=-0.002 Sum_probs=101.3
Q ss_pred CCeEEEEECCCCCeEEEEeCC---CeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeE
Q 004217 108 RSTIAAAFSPDGKTLASTHGD---HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC 184 (767)
Q Consensus 108 ~sVtsVaFSpDG~~LASgs~D---GtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~ 184 (767)
..+..++|||||++|+....+ ..|.+||+.+++......++......+.|+| +++.|+.++.++.|++||+.+++.
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIST-DERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECT-TSSEEEEEETTTEEEEEETTTCCE
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECC-CCCEEEEEEcCCcEEEEECCCCCc
Confidence 337788999999998877543 4789999998876544333333333478999 899999999999999999999887
Q ss_pred EEeec-CCCCeEE-------------------EEEcCCCCEEEEEE-----C-CcEEEEEcCCCccccCCeEEecCCCCe
Q 004217 185 IGSRD-FYRPIAS-------------------IAFHASGELLAVAS-----G-HKLYIWRYNMREETSSPRIVLRTRRSL 238 (767)
Q Consensus 185 i~~l~-h~~~Vts-------------------VafSPdG~~LAsgS-----d-d~V~VWDl~t~~~~~~~~~l~~h~~~V 238 (767)
..... +...... +.|+|++++++... . ..|++||+.+++... +..+...+
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~----~~~~~~~~ 190 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEV----IHQDTAWL 190 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEE----EEEESSCE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEe----eccCCccc
Confidence 66544 2222222 35677777665542 2 239999998876433 34567789
Q ss_pred EEEEEcc-CCCeEEEEE
Q 004217 239 RAVHFHP-HAAPLLLTA 254 (767)
Q Consensus 239 tsVaFSP-DG~~LlaSg 254 (767)
..+.|+| |++.|+...
T Consensus 191 ~~~~~sp~dg~~l~~~~ 207 (396)
T 3c5m_A 191 GHPIYRPFDDSTVGFCH 207 (396)
T ss_dssp EEEEEETTEEEEEEEEE
T ss_pred ccceECCCCCCEEEEEe
Confidence 9999999 788777665
No 178
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.13 E-value=1.3e-09 Score=120.46 Aligned_cols=171 Identities=11% Similarity=0.025 Sum_probs=130.1
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC--------------CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECC
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC--------------PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQ 137 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~--------------~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~ 137 (767)
..++++++.++.+++++.+ .+.+|+.+.- ....+.. |+.|+| |+++|+++ .++.|++||+.
T Consensus 40 ~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred ccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence 4567788899999999887 5666985421 1234566 999999 99999999 88999999998
Q ss_pred CCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEE-CCcEEE
Q 004217 138 TGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS-GHKLYI 216 (767)
Q Consensus 138 tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgS-dd~V~V 216 (767)
+......+..|...+..+.+.+ . .++.+..||+|.+||+.++.... +...|++++|+|+| ++.|. ++.+++
T Consensus 115 sl~~~~~~~~~~~~v~~i~~~~-p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~ 186 (388)
T 1xip_A 115 ELSEFRTVTSFEKPVFQLKNVN-N--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQS 186 (388)
T ss_dssp STTCEEEEEECSSCEEEEEECS-S--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSCEEE
T ss_pred hhhccCccceeecceeeEEecC-C--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCcEEE
Confidence 8766666777888898888876 2 38888999999999999887654 34689999999999 45555 555999
Q ss_pred EEcCCCcc--cc---CCeEEe---cCCCCeEEEEEccCCCeEEEEEe
Q 004217 217 WRYNMREE--TS---SPRIVL---RTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 217 WDl~t~~~--~~---~~~~l~---~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
|+...... .. .+..+. +|...|.+|.|.+++.++++-..
T Consensus 187 ~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~ 233 (388)
T 1xip_A 187 FAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGN 233 (388)
T ss_dssp EEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEEC
T ss_pred EcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcC
Confidence 98877653 11 010112 37789999999999998776554
No 179
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.12 E-value=1.7e-09 Score=117.17 Aligned_cols=170 Identities=10% Similarity=0.096 Sum_probs=126.0
Q ss_pred EEEEEcCCCEEEEEeC----------CCeEEEEeCCCCCCC----C------CCCCeEEEEECCCCCeEEEEeC--CCeE
Q 004217 74 FEAGRDARRGLASWVE----------AESLHHLRPKYCPLS----P------PPRSTIAAAFSPDGKTLASTHG--DHTV 131 (767)
Q Consensus 74 ~vA~sd~g~~LaSgs~----------DgsIrlWd~~t~~L~----g------H~~sVtsVaFSpDG~~LASgs~--DGtV 131 (767)
-++++.+++.++...+ ++.|.+||..+.+.. . +......++|+|||++|+++.. +++|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 6788899999998863 667999999875321 1 2345678999999999998864 5899
Q ss_pred EEEECCCCeEEEE-EccC-------------------------------CCCcE--------------------------
Q 004217 132 KIIDCQTGSCLKV-LHGH-------------------------------RRTPW-------------------------- 153 (767)
Q Consensus 132 rVWDl~tg~~l~~-L~gH-------------------------------~~~V~-------------------------- 153 (767)
.+||+++++.+.. +... .+.+.
T Consensus 134 ~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 213 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDK 213 (361)
T ss_dssp EEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSE
T ss_pred EEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCE
Confidence 9999988776655 2100 00000
Q ss_pred --------------------------------------------EEEEccCCCcEEEEEeC-----------CCeEEEEE
Q 004217 154 --------------------------------------------VVRFHPLNPTIIASGSL-----------DHEVRLWN 178 (767)
Q Consensus 154 --------------------------------------------sLafsP~dg~lLaSgS~-----------DGtVrIWD 178 (767)
.++|+| +++.++.+.. +++|.+||
T Consensus 214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD 292 (361)
T 2oiz_A 214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMD 292 (361)
T ss_dssp EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEE
T ss_pred EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec-CCCeEEEEEccCCCcccccCCCceEEEEE
Confidence 156777 5444444322 34899999
Q ss_pred CCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECCcEEEEEcCCC--ccccCCeEEecCCCCeEEEEEccCCC
Q 004217 179 ASTAECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMR--EETSSPRIVLRTRRSLRAVHFHPHAA 248 (767)
Q Consensus 179 l~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t~--~~~~~~~~l~~h~~~VtsVaFSPDG~ 248 (767)
+.+++.+..+.... +..++|+|+|++|++++.+.|.+||..++ +.+. .+..+......++|+|||.
T Consensus 293 ~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~---~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 293 TKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLR---TIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTTTEEEEEEECTT-CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEE---EETTSCSSEEEEEECCCSC
T ss_pred CCCCcEEEEEecCC-eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeE---EeccCCCCcEEEEecCCCC
Confidence 99999999887555 99999999999999888866999999998 6544 4456777889999999996
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.12 E-value=6.8e-09 Score=121.51 Aligned_cols=177 Identities=11% Similarity=-0.022 Sum_probs=123.1
Q ss_pred eEEEEEEcCCCEEE-----EEeCCCeEEEEeCCCCCCC--CCCCCe--EEEEECCCCCeEEEEeCCCe------------
Q 004217 72 QIFEAGRDARRGLA-----SWVEAESLHHLRPKYCPLS--PPPRST--IAAAFSPDGKTLASTHGDHT------------ 130 (767)
Q Consensus 72 ~~~vA~sd~g~~La-----Sgs~DgsIrlWd~~t~~L~--gH~~sV--tsVaFSpDG~~LASgs~DGt------------ 130 (767)
....+++.+|+.|+ .|+++..|++||+.+++.. .+...+ ..++|+|||+.|+.++.|..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 55567788898888 4555678999999988543 233334 78999999999999998776
Q ss_pred -EEEEECCCCe----EEEEEccCCCCcEEEEEccCCCcEEEEEeCCC----eEEEEECCCCeEEEeecCCCCeEEEEEcC
Q 004217 131 -VKIIDCQTGS----CLKVLHGHRRTPWVVRFHPLNPTIIASGSLDH----EVRLWNASTAECIGSRDFYRPIASIAFHA 201 (767)
Q Consensus 131 -VrVWDl~tg~----~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DG----tVrIWDl~tg~~i~~l~h~~~VtsVafSP 201 (767)
|++|++.++. .+.....|...+..+.|+| ++++|+..+.++ .|.+||..+++......+...+....| +
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~ 280 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-W 280 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-E
T ss_pred EEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-c
Confidence 9999998875 3333344566788999999 778777776665 777887766665555555556666667 5
Q ss_pred CCCEEEEEEC-----CcEEEEEcCCCccccCCeEEecC--CCCeEEEEEccCCCeEEEEE
Q 004217 202 SGELLAVASG-----HKLYIWRYNMREETSSPRIVLRT--RRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 202 dG~~LAsgSd-----d~V~VWDl~t~~~~~~~~~l~~h--~~~VtsVaFSPDG~~LlaSg 254 (767)
+|. |+..++ ..|.+||+.+++... ...+..+ ...+..++|+ ++. ++++.
T Consensus 281 ~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~l~~~~~~-~~~-lv~~~ 336 (695)
T 2bkl_A 281 KDR-FYVLTDEGAPRQRVFEVDPAKPARAS-WKEIVPEDSSASLLSVSIV-GGH-LSLEY 336 (695)
T ss_dssp TTE-EEEEECTTCTTCEEEEEBTTBCSGGG-CEEEECCCSSCEEEEEEEE-TTE-EEEEE
T ss_pred CCc-EEEEECCCCCCCEEEEEeCCCCCccC-CeEEecCCCCCeEEEEEEE-CCE-EEEEE
Confidence 666 554443 239999998765311 1234433 4567888888 444 55544
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.11 E-value=6e-09 Score=109.27 Aligned_cols=153 Identities=15% Similarity=0.175 Sum_probs=106.0
Q ss_pred CCeEEEEeCCCCCCCCCCCCeEEEEECCCCCeEEEEeCC---C--eEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcE
Q 004217 90 AESLHHLRPKYCPLSPPPRSTIAAAFSPDGKTLASTHGD---H--TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTI 164 (767)
Q Consensus 90 DgsIrlWd~~t~~L~gH~~sVtsVaFSpDG~~LASgs~D---G--tVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~l 164 (767)
+..|.+|++.+++...- ..+..++|||||++|+..+.+ + .|.+||+.+++.......+ . +..+.|+| +++.
T Consensus 42 ~~~l~~~d~~~~~~~~l-~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wsp-dg~~ 117 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNE-DSRK 117 (347)
T ss_dssp EEEEEEEETTTCCEEEE-ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECT-TSSE
T ss_pred cceEEEEeCCCCceEEc-ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECC-CCCE
Confidence 56788999877632111 568899999999999988754 3 4888899888766555443 3 99999999 8887
Q ss_pred EEEEeCC---------------------------CeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECC-----
Q 004217 165 IASGSLD---------------------------HEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH----- 212 (767)
Q Consensus 165 LaSgS~D---------------------------GtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd----- 212 (767)
|+.++.+ ..|.+||+.+++.+..+... .+..++|+|+| +++++..+
T Consensus 118 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~ 195 (347)
T 2gop_A 118 LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQ 195 (347)
T ss_dssp EEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCC
T ss_pred EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEeccccccc
Confidence 7776632 57999999998873333323 78899999999 77777532
Q ss_pred ---cEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 213 ---KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 213 ---~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
...||.+++++. . .+..+ ..+..+ +|||++|+..+.
T Consensus 196 ~~~~~~l~~~d~~~~-~---~l~~~-~~~~~~--spdg~~l~~~~~ 234 (347)
T 2gop_A 196 YFKFWDIYIWEDGKE-E---KMFEK-VSFYAV--DSDGERILLYGK 234 (347)
T ss_dssp SSCCEEEEEEETTEE-E---EEEEE-ESEEEE--EECSSCEEEEEC
T ss_pred ccccccEEEeCCCce-E---EeccC-cceeeE--CCCCCEEEEEEc
Confidence 334444434332 2 23334 455554 999998887764
No 182
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.11 E-value=4.4e-09 Score=111.52 Aligned_cols=177 Identities=12% Similarity=0.149 Sum_probs=134.3
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC--CC------------CCCCCCeEEEEECC-CCCeEEEEe-CCCeEEEEE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC--PL------------SPPPRSTIAAAFSP-DGKTLASTH-GDHTVKIID 135 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~--~L------------~gH~~sVtsVaFSp-DG~~LASgs-~DGtVrVWD 135 (767)
+.-+++..++..+++...++.|++|+.... .+ .++......|+|+| +++++++.+ .++.|++||
T Consensus 93 p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~ 172 (329)
T 3fvz_A 93 PHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS 172 (329)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC
T ss_pred ceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc
Confidence 556777778888888888999999998654 11 24455789999999 788888876 689999999
Q ss_pred CCCCeEEEEEccCC----------CCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec---CCCCeEEEEEcCC
Q 004217 136 CQTGSCLKVLHGHR----------RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHAS 202 (767)
Q Consensus 136 l~tg~~l~~L~gH~----------~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~---h~~~VtsVafSPd 202 (767)
.+++.+..+.... ..+..++++|++++++++...++.|++||..+++.+..+. +...+..++|+|
T Consensus 173 -~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p- 250 (329)
T 3fvz_A 173 -PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP- 250 (329)
T ss_dssp -TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-
T ss_pred -CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-
Confidence 5677777774322 3488999999338888998899999999999898888763 556788999999
Q ss_pred CCEEEEEE-------C-CcEEEEEcCCCccccCCeEE---ecCCCCeEEEEEccCCCeEEEEE
Q 004217 203 GELLAVAS-------G-HKLYIWRYNMREETSSPRIV---LRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 203 G~~LAsgS-------d-d~V~VWDl~t~~~~~~~~~l---~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
+..++..+ . ..|++||+.+++.+. .+ ..+...+..|+|+|+|. |+++.
T Consensus 251 g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~---~~~~~~~~~~~p~~ia~~~dG~-lyvad 309 (329)
T 3fvz_A 251 GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIID---VFKPVRKHFDMPHDIVASEDGT-VYIGD 309 (329)
T ss_dssp TEEEEEECCCCTTCSCCCCEEEEETTTCCEEE---EECCSSSCCSSEEEEEECTTSE-EEEEE
T ss_pred CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEE---EEcCCCCccCCeeEEEECCCCC-EEEEE
Confidence 44433332 1 249999999887654 33 35667799999999995 55544
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.09 E-value=1.5e-08 Score=106.09 Aligned_cols=166 Identities=12% Similarity=0.027 Sum_probs=127.5
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCC----CCCCC-CCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCC-CCc
Q 004217 79 DARRGLASWVEAESLHHLRPKYCP----LSPPP-RSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHR-RTP 152 (767)
Q Consensus 79 d~g~~LaSgs~DgsIrlWd~~t~~----L~gH~-~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~-~~V 152 (767)
..++.|++++.++.|.+||.++++ +..+. ..+.++.++|+|++|+ +.++.|+.||. +|+.+..+..+. ..+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 457888899999999999997773 33444 4689999999999988 45778999998 899999988653 468
Q ss_pred EEEEEccCCCcEEEEEeC-CCeEEEEECCCCeEEEeecCC-------CCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCc
Q 004217 153 WVVRFHPLNPTIIASGSL-DHEVRLWNASTAECIGSRDFY-------RPIASIAFHASGELLAVASGHK-LYIWRYNMRE 223 (767)
Q Consensus 153 ~sLafsP~dg~lLaSgS~-DGtVrIWDl~tg~~i~~l~h~-------~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~ 223 (767)
.++.+.+ +++++++.+. ++.|..+|. +++.+..+... .....+++.++|++|++...++ |.+||.. ++
T Consensus 80 ~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 80 QTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 8899999 8999999887 788888886 67776664311 2345567899999999887554 9999988 77
Q ss_pred cccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 224 ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 224 ~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
.+. .+.. ...+.++.+.++|+.+++..
T Consensus 157 ~~w---~~~~-~~~~~~~~~~~~g~~~v~~~ 183 (276)
T 3no2_A 157 LLN---SVKL-SGTPFSSAFLDNGDCLVACG 183 (276)
T ss_dssp EEE---EEEC-SSCCCEEEECTTSCEEEECB
T ss_pred EEE---EEEC-CCCccceeEcCCCCEEEEeC
Confidence 655 2322 34567788899999666544
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.08 E-value=2.2e-08 Score=115.89 Aligned_cols=171 Identities=12% Similarity=0.047 Sum_probs=120.3
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC---CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECC--CCeEEEEEccCCCCcEEE
Q 004217 81 RRGLASWVEAESLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQ--TGSCLKVLHGHRRTPWVV 155 (767)
Q Consensus 81 g~~LaSgs~DgsIrlWd~~t~~L~---gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~--tg~~l~~L~gH~~~V~sL 155 (767)
+..+++...++.|.++|..++++. .....+..+.|||||++|++++.|+.|.+||+. +++.+..+... .....+
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~i 245 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSI 245 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCcee
Confidence 345566778899999999887432 233467899999999999999999999999996 88888877643 346789
Q ss_pred EEc----cCCCcEEEEE-eCCCeEEEEECCCCeEEEeecCC---------------------------------------
Q 004217 156 RFH----PLNPTIIASG-SLDHEVRLWNASTAECIGSRDFY--------------------------------------- 191 (767)
Q Consensus 156 afs----P~dg~lLaSg-S~DGtVrIWDl~tg~~i~~l~h~--------------------------------------- 191 (767)
+|+ | ++++++.+ ..+++|.++|..+.+.+..+...
T Consensus 246 a~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 246 ETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp EECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEccccCC-CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 999 7 66665555 45699999999888776653210
Q ss_pred -----------------CCeEEEEEcCCCCEEEEEE--CCcEEEEEcCCCccccCCeE--EecCCCCeEEEEEccCCCeE
Q 004217 192 -----------------RPIASIAFHASGELLAVAS--GHKLYIWRYNMREETSSPRI--VLRTRRSLRAVHFHPHAAPL 250 (767)
Q Consensus 192 -----------------~~VtsVafSPdG~~LAsgS--dd~V~VWDl~t~~~~~~~~~--l~~h~~~VtsVaFSPDG~~L 250 (767)
.....+.|+|+|++|+++. +++|.++|+.+++....... ...|...-..+ ++|++..+
T Consensus 325 vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v 403 (567)
T 1qks_A 325 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPV 403 (567)
T ss_dssp EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEE
T ss_pred EecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcE
Confidence 0122567999999988877 46699999999876441110 11243222222 68886666
Q ss_pred EEEE
Q 004217 251 LLTA 254 (767)
Q Consensus 251 laSg 254 (767)
.+++
T Consensus 404 ~~t~ 407 (567)
T 1qks_A 404 WATS 407 (567)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 6554
No 185
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.02 E-value=7.1e-09 Score=112.20 Aligned_cols=96 Identities=10% Similarity=0.096 Sum_probs=74.2
Q ss_pred CCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCeEEEEe----------CCCeEEEEECCCCeEEEEEccC------
Q 004217 89 EAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTH----------GDHTVKIIDCQTGSCLKVLHGH------ 148 (767)
Q Consensus 89 ~DgsIrlWd~~t~~L----~gH~~sVtsVaFSpDG~~LASgs----------~DGtVrVWDl~tg~~l~~L~gH------ 148 (767)
.|+.|.+||..++++ ..+..+ .++|+|||++|+++. .+++|.+||..+++.+..+...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 367899999877643 233333 899999999999886 3678999999999988877532
Q ss_pred CCCcEEEEEccCCCcEEEEEeC--CCeEEEEECCCCeEEEe
Q 004217 149 RRTPWVVRFHPLNPTIIASGSL--DHEVRLWNASTAECIGS 187 (767)
Q Consensus 149 ~~~V~sLafsP~dg~lLaSgS~--DGtVrIWDl~tg~~i~~ 187 (767)
......++|+| ++++|+++.. +++|.+||+.+++.+..
T Consensus 107 g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 107 LNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 34577899999 8888887763 68999999988766554
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.01 E-value=2.3e-09 Score=112.21 Aligned_cols=147 Identities=12% Similarity=0.101 Sum_probs=110.4
Q ss_pred CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCC----CeEEEEE
Q 004217 103 LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLD----HEVRLWN 178 (767)
Q Consensus 103 L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~D----GtVrIWD 178 (767)
+..+...+.+++|+++|++++++..++.|.+||.++++....+..+...+.+++|+| +++++++...+ +.|.+||
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEEC
T ss_pred EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEe
Confidence 445666789999999999888888899999999998876655545677899999999 78888887766 7899999
Q ss_pred CCCCeEEEee---cCCCCeEEEEEcCCCCEEEEEEC-------CcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCC
Q 004217 179 ASTAECIGSR---DFYRPIASIAFHASGELLAVASG-------HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAA 248 (767)
Q Consensus 179 l~tg~~i~~l---~h~~~VtsVafSPdG~~LAsgSd-------d~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~ 248 (767)
..+++....+ .....+..++++|+|+++++... ++|..||..+++.. .+..+...+..++|+|||+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT----PIIQNISVANGIALSTDEK 194 (333)
T ss_dssp TTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE----EEEEEESSEEEEEECTTSS
T ss_pred CCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE----EeecCCCcccceEECCCCC
Confidence 9887765333 24467899999999998877653 23666665544322 2223334678999999998
Q ss_pred eEEEEE
Q 004217 249 PLLLTA 254 (767)
Q Consensus 249 ~LlaSg 254 (767)
+++++.
T Consensus 195 ~l~v~~ 200 (333)
T 2dg1_A 195 VLWVTE 200 (333)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 766654
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.00 E-value=8.4e-09 Score=106.65 Aligned_cols=180 Identities=17% Similarity=0.123 Sum_probs=125.9
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCCCC-------C-CCCCeEEEEECCCCCeEEEE----e-------------
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCPLS-------P-PPRSTIAAAFSPDGKTLAST----H------------- 126 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~L~-------g-H~~sVtsVaFSpDG~~LASg----s------------- 126 (767)
...++...++..+++...++.|.+||..++++. + ....+.+++++++|+++++. .
T Consensus 71 ~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~ 150 (296)
T 3e5z_A 71 QNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMEL 150 (296)
T ss_dssp EEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCS
T ss_pred cceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccC
Confidence 555667677777766666789999999766421 1 12356789999999988873 2
Q ss_pred CCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECC-CCeE---EEee-cCCCCeEEEEEcC
Q 004217 127 GDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS-TAEC---IGSR-DFYRPIASIAFHA 201 (767)
Q Consensus 127 ~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~-tg~~---i~~l-~h~~~VtsVafSP 201 (767)
..+.|..+|.. ++ +..+..+...+..++|+| +++.+++.+.++.|.+||+. +++. ...+ .....+..+++++
T Consensus 151 ~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~ 227 (296)
T 3e5z_A 151 PGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA 227 (296)
T ss_dssp SSCEEEEECTT-SC-EEEEECCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT
T ss_pred CCcEEEEECCC-CC-EEEeecCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC
Confidence 13456666655 44 444556667789999999 88877888888999999997 5554 2223 2344567899999
Q ss_pred CCCEEEEEECCcEEEEEcCCCccccCCeEEecCCCCeEEEEE-ccCCCeEEEEEe--eCCcC
Q 004217 202 SGELLAVASGHKLYIWRYNMREETSSPRIVLRTRRSLRAVHF-HPHAAPLLLTAE--VNDLD 260 (767)
Q Consensus 202 dG~~LAsgSdd~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaF-SPDG~~LlaSgs--vwdl~ 260 (767)
+|+++++. +++|.+||.. ++... .+..+.. +.+++| +|+++.|++++. +|.++
T Consensus 228 ~G~l~v~~-~~~v~~~~~~-g~~~~---~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~ 283 (296)
T 3e5z_A 228 GGLIWASA-GDGVHVLTPD-GDELG---RVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIE 283 (296)
T ss_dssp TSCEEEEE-TTEEEEECTT-SCEEE---EEECSSC-CCEEEEESTTSCEEEEEETTEEEEEE
T ss_pred CCCEEEEc-CCeEEEECCC-CCEEE---EEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEE
Confidence 99977766 7779999986 44322 3444555 899999 589987777654 55544
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.96 E-value=1.3e-08 Score=106.79 Aligned_cols=168 Identities=10% Similarity=0.042 Sum_probs=112.1
Q ss_pred eEEEEEEcCCCEEEEEeCC---C--eEEEEeCCCCC---CCCCCCCeEEEEECCCCCeEEEEeCC---------------
Q 004217 72 QIFEAGRDARRGLASWVEA---E--SLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGD--------------- 128 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~D---g--sIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~LASgs~D--------------- 128 (767)
.....++.+++.|+..+.+ + .|.+|++.+++ +..+.. +..++|+|||+.|+.++.+
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~ 139 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPA 139 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCC
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccce
Confidence 3446677888888877643 3 37777877653 333344 9999999999999888743
Q ss_pred ------------CeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCC-------eEEEEECCCCeEEEeec
Q 004217 129 ------------HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDH-------EVRLWNASTAECIGSRD 189 (767)
Q Consensus 129 ------------GtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DG-------tVrIWDl~tg~~i~~l~ 189 (767)
..|++||+.+++.+..+.. . .+..+.|+| ++ +++++..+. ...||.+.+++......
T Consensus 140 ~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~ 215 (347)
T 2gop_A 140 WFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFE 215 (347)
T ss_dssp C---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEE
T ss_pred eecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeCCCceEEecc
Confidence 5799999999887555655 4 788999999 77 777776542 33444443665544444
Q ss_pred CCCCeEEEEEcCCCCEEEEEEC-C--------cEEEEEcCCCccccCCeEEecCCCCeEE-EEEccCCCeEEEEE
Q 004217 190 FYRPIASIAFHASGELLAVASG-H--------KLYIWRYNMREETSSPRIVLRTRRSLRA-VHFHPHAAPLLLTA 254 (767)
Q Consensus 190 h~~~VtsVafSPdG~~LAsgSd-d--------~V~VWDl~t~~~~~~~~~l~~h~~~Vts-VaFSPDG~~LlaSg 254 (767)
+ ..+..+ +|+|++|+..+. + .|++|| +++... ....+...+.. +.|+ |+ .++++.
T Consensus 216 ~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~---l~~~~~~~~~~~~~~s-dg-~~~~~~ 280 (347)
T 2gop_A 216 K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMG---ILDEVDRGVGQAKIKD-GK-VYFTLF 280 (347)
T ss_dssp E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEE---SSTTCCSEEEEEEEET-TE-EEEEEE
T ss_pred C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEe---ccccCCcccCCccEEc-Cc-EEEEEe
Confidence 4 445444 999998877763 2 378887 433221 22345677886 9999 88 444433
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.96 E-value=5.1e-08 Score=98.41 Aligned_cols=176 Identities=10% Similarity=-0.005 Sum_probs=123.8
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCCCC----CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCPLS----PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~L~----gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
...++...++..+++.. ++.|.+|+.....+. .....+.+++++++|+++++...++.|.+||..+.........
T Consensus 69 p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~ 147 (270)
T 1rwi_B 69 PQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT 147 (270)
T ss_dssp CCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC
T ss_pred cceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccc
Confidence 34455655666444444 889999998765322 2335789999999999888777788999998765544332233
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEEC-CcEEEEEcCCCccc
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG-HKLYIWRYNMREET 225 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSd-d~V~VWDl~t~~~~ 225 (767)
....+..+++++ +++++++...++.|.+||.......... .....+..++++++|+++++... ++|.+||.......
T Consensus 148 ~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 148 GLNDPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST 226 (270)
T ss_dssp SCCSCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE
T ss_pred cCCCceeEEEeC-CCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce
Confidence 334678899999 7888888878899999999877655432 23367899999999976666554 45999998765432
Q ss_pred cCCeEEecCCCCeEEEEEccCCCeEEE
Q 004217 226 SSPRIVLRTRRSLRAVHFHPHAAPLLL 252 (767)
Q Consensus 226 ~~~~~l~~h~~~VtsVaFSPDG~~Lla 252 (767)
. ....+...+.+++++++|+.+++
T Consensus 227 ~---~~~~~~~~p~~i~~~~~g~l~v~ 250 (270)
T 1rwi_B 227 V---LPFTGLNTPLAVAVDSDRTVYVA 250 (270)
T ss_dssp E---CCCCSCSCEEEEEECTTCCEEEE
T ss_pred e---eccCCCCCceeEEECCCCCEEEE
Confidence 1 11223467899999999984443
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.90 E-value=8.1e-08 Score=102.08 Aligned_cols=176 Identities=10% Similarity=0.014 Sum_probs=125.5
Q ss_pred eEEEEEEcCCCEEEEEe-CCCeEEEEeCCCCCCC-----CC----CCCeEEEEECCCCCeEEEEe--CCCeEEEEECCCC
Q 004217 72 QIFEAGRDARRGLASWV-EAESLHHLRPKYCPLS-----PP----PRSTIAAAFSPDGKTLASTH--GDHTVKIIDCQTG 139 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs-~DgsIrlWd~~t~~L~-----gH----~~sVtsVaFSpDG~~LASgs--~DGtVrVWDl~tg 139 (767)
+..+++..++ .++... .++.|.+||..+.++. +. ......+++ +++.|+.+. .++.|.+||.+++
T Consensus 86 p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 86 PRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp EEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTT
T ss_pred CcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCC
Confidence 5556665566 455554 7899999999886422 11 114556777 455555554 4889999999999
Q ss_pred eEEEEEccCCCCcEEEEEccCCCcEEEEEeCC----------CeEEEEECCCCeEEEeecC--CCCeEEEEEcCCCCEEE
Q 004217 140 SCLKVLHGHRRTPWVVRFHPLNPTIIASGSLD----------HEVRLWNASTAECIGSRDF--YRPIASIAFHASGELLA 207 (767)
Q Consensus 140 ~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~D----------GtVrIWDl~tg~~i~~l~h--~~~VtsVafSPdG~~LA 207 (767)
+.+..+... .....+.++| ++++++++..+ +.|.+||..+++....+.. ......++|+|++++|.
T Consensus 163 ~~~~~i~~g-~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ly 240 (328)
T 3dsm_A 163 KVVDELTIG-IQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLY 240 (328)
T ss_dssp EEEEEEECS-SCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEE
T ss_pred eEEEEEEcC-CCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEE
Confidence 988877643 3467889999 88888777655 7999999999988777653 34789999999999888
Q ss_pred EEECCcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 208 VASGHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 208 sgSdd~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
++.. .|.+||..+++... ......+......++++|++..+.++.
T Consensus 241 v~~~-~v~~~d~~t~~~~~-~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 241 WINN-DIWRMPVEADRVPV-RPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp EESS-SEEEEETTCSSCCS-SCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred EEcc-EEEEEECCCCceee-eeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 8765 89999998876532 111122246789999999655566654
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.89 E-value=1.4e-07 Score=110.43 Aligned_cols=176 Identities=12% Similarity=-0.049 Sum_probs=125.4
Q ss_pred EEEEcCCCEEEEEeCCCe----------------EEEEeCCCCC----C----CCCCCCeEEEEECCCCCeEEEEeC---
Q 004217 75 EAGRDARRGLASWVEAES----------------LHHLRPKYCP----L----SPPPRSTIAAAFSPDGKTLASTHG--- 127 (767)
Q Consensus 75 vA~sd~g~~LaSgs~Dgs----------------IrlWd~~t~~----L----~gH~~sVtsVaFSpDG~~LASgs~--- 127 (767)
++++.+++.|+..+.++. |++|++.+++ + ..|...+..+.|||||++|+..+.
T Consensus 176 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 255 (710)
T 2xdw_A 176 MAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC 255 (710)
T ss_dssp EEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS
T ss_pred EEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC
Confidence 566778888888877765 9999998753 2 234566889999999999988765
Q ss_pred --CCeEEEEECCC------Ce-EEEEEccCCCCcEEEEEccCCCcEEEEEeC-C---CeEEEEECCCCeE---EEeecCC
Q 004217 128 --DHTVKIIDCQT------GS-CLKVLHGHRRTPWVVRFHPLNPTIIASGSL-D---HEVRLWNASTAEC---IGSRDFY 191 (767)
Q Consensus 128 --DGtVrVWDl~t------g~-~l~~L~gH~~~V~sLafsP~dg~lLaSgS~-D---GtVrIWDl~tg~~---i~~l~h~ 191 (767)
+..|++||+.+ +. ....+..+...+.. .|+| +++.|+..+. + ..|.+||+.+++. ...+.+.
T Consensus 256 ~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 333 (710)
T 2xdw_A 256 DPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH 333 (710)
T ss_dssp SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC
T ss_pred CCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEec-cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC
Confidence 56899999986 53 45667677776655 4888 5665554443 3 3699999988742 3334443
Q ss_pred C--CeEEEEEcCCCCEEEEEECCc---EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 192 R--PIASIAFHASGELLAVASGHK---LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 192 ~--~VtsVafSPdG~~LAsgSdd~---V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
. .+..++|++++.++++...++ |++||+.+++... .+..+...+..+.++|+++.++.+.+
T Consensus 334 ~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~---~l~~~~~~v~~~~~s~d~~~l~~~~s 399 (710)
T 2xdw_A 334 EKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLK---IFPLEVGSVVGYSGQKKDTEIFYQFT 399 (710)
T ss_dssp SSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEE---EECCCSSEEEEEECCTTCSEEEEEEE
T ss_pred CCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEE---ecCCCCceEEEEecCCCCCEEEEEEe
Confidence 3 678899997777777777553 7888886665433 44456778899999999987776543
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.85 E-value=1.2e-07 Score=95.54 Aligned_cols=175 Identities=9% Similarity=-0.020 Sum_probs=119.5
Q ss_pred eEEEEEEcCCCEEE-EEeCCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEc
Q 004217 72 QIFEAGRDARRGLA-SWVEAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH 146 (767)
Q Consensus 72 ~~~vA~sd~g~~La-Sgs~DgsIrlWd~~t~~L----~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~ 146 (767)
+..++...++...+ +...++.|..|+..+... ..+...+.+++++++|+++++.. ++.|.+||..+.... .+.
T Consensus 26 p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~~ 103 (270)
T 1rwi_B 26 PSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VLP 103 (270)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-ECC
T ss_pred ccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-eee
Confidence 55566666666555 436778999998765421 23345688999999999666655 889999998765533 332
Q ss_pred -cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEEC-CcEEEEEcCCCc
Q 004217 147 -GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG-HKLYIWRYNMRE 223 (767)
Q Consensus 147 -gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSd-d~V~VWDl~t~~ 223 (767)
.....+..+++++ +++++++...++.|.+||..+....... .....+..++++++|+++++... +.|.+||.....
T Consensus 104 ~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 104 FDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred cCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 2335789999999 8888888888899999987665443322 23346788999999996666553 569999987665
Q ss_pred cccCCeEEecCCCCeEEEEEccCCCeEEE
Q 004217 224 ETSSPRIVLRTRRSLRAVHFHPHAAPLLL 252 (767)
Q Consensus 224 ~~~~~~~l~~h~~~VtsVaFSPDG~~Lla 252 (767)
... ....+...+..++++++|..+++
T Consensus 183 ~~~---~~~~~~~~p~~i~~d~~g~l~v~ 208 (270)
T 1rwi_B 183 QVV---LPFTDITAPWGIAVDEAGTVYVT 208 (270)
T ss_dssp EEE---CCCSSCCSEEEEEECTTCCEEEE
T ss_pred eEe---ecccCCCCceEEEECCCCCEEEE
Confidence 322 11223367899999999964443
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.79 E-value=1.3e-06 Score=89.85 Aligned_cols=177 Identities=9% Similarity=0.012 Sum_probs=116.2
Q ss_pred EEEEEEcCCCEEEE-------EeCCCeEEEEeCCCCCCC--------CCCCCeEEEEECCC-CCeEEEEeCCCeEEEEEC
Q 004217 73 IFEAGRDARRGLAS-------WVEAESLHHLRPKYCPLS--------PPPRSTIAAAFSPD-GKTLASTHGDHTVKIIDC 136 (767)
Q Consensus 73 ~~vA~sd~g~~LaS-------gs~DgsIrlWd~~t~~L~--------gH~~sVtsVaFSpD-G~~LASgs~DGtVrVWDl 136 (767)
..+++..++..+++ ...++.|.+|+..++++. ++...+.+++++++ |+++++.. +..|.+||.
T Consensus 21 ~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~ 99 (314)
T 1pjx_A 21 EGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVVQT 99 (314)
T ss_dssp EEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEEEET
T ss_pred cCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEEeC
Confidence 34455556665555 467888999997766421 24567999999999 76555544 447999999
Q ss_pred CCCeEEEE-Ecc----CCCCcEEEEEccCCCcEEEEEeCC---------------CeEEEEECCCCeEEEeecCCCCeEE
Q 004217 137 QTGSCLKV-LHG----HRRTPWVVRFHPLNPTIIASGSLD---------------HEVRLWNASTAECIGSRDFYRPIAS 196 (767)
Q Consensus 137 ~tg~~l~~-L~g----H~~~V~sLafsP~dg~lLaSgS~D---------------GtVrIWDl~tg~~i~~l~h~~~Vts 196 (767)
+ ++.... ... ....+..+++++ +++++++...+ +.|..||.. ++.............
T Consensus 100 ~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~ 176 (314)
T 1pjx_A 100 D-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNG 176 (314)
T ss_dssp T-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEE
T ss_pred C-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcce
Confidence 8 765433 221 123588999999 78888877665 577788776 555444444455788
Q ss_pred EEEc----CCCCEEEEEE--CCcEEEEEcC-CCcccc--CCeEEecCC-CCeEEEEEccCCCeEEEE
Q 004217 197 IAFH----ASGELLAVAS--GHKLYIWRYN-MREETS--SPRIVLRTR-RSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 197 VafS----PdG~~LAsgS--dd~V~VWDl~-t~~~~~--~~~~l~~h~-~~VtsVaFSPDG~~LlaS 253 (767)
++|+ |+|+.|.++. +++|.+||+. .++... ....+..+. ..+..++++++|+.+++.
T Consensus 177 i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred EEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEE
Confidence 9999 9997666664 3559999986 333111 001112222 567899999999855554
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.79 E-value=3.6e-07 Score=107.82 Aligned_cols=177 Identities=12% Similarity=0.016 Sum_probs=116.4
Q ss_pred eEEEEEEcCCCEEEEEeCC-----CeEEEEeCCCCCCC-CCCCC--eEEEEECCCCCeEEEEeCCCe-------------
Q 004217 72 QIFEAGRDARRGLASWVEA-----ESLHHLRPKYCPLS-PPPRS--TIAAAFSPDGKTLASTHGDHT------------- 130 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~D-----gsIrlWd~~t~~L~-gH~~s--VtsVaFSpDG~~LASgs~DGt------------- 130 (767)
....+++.+++.|+....+ ..|++||+.+++.. .+... +..++|+|| +.|+.++.|+.
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~ 243 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQ 243 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCC
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCC
Confidence 4456677888888876543 46999999987532 11122 257899999 99998887654
Q ss_pred -EEEEECCCCeE--EEEEc--cCCCCcEEEEEccCCCcEEEEEeCCC-----eEEEEECCCC--e-EEEeecCCCCeEEE
Q 004217 131 -VKIIDCQTGSC--LKVLH--GHRRTPWVVRFHPLNPTIIASGSLDH-----EVRLWNASTA--E-CIGSRDFYRPIASI 197 (767)
Q Consensus 131 -VrVWDl~tg~~--l~~L~--gH~~~V~sLafsP~dg~lLaSgS~DG-----tVrIWDl~tg--~-~i~~l~h~~~VtsV 197 (767)
|++|++.++.. ...+. .+...+..+.|+| ++++|+..+.++ .|++||+.++ + ......+...+...
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 322 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF 322 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE
Confidence 99999987652 22333 3334588999999 888777766543 8999999887 4 33434444445544
Q ss_pred EEcCCCCEEEEEECC-----cEEEEEcCCCc-cccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 198 AFHASGELLAVASGH-----KLYIWRYNMRE-ETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 198 afSPdG~~LAsgSdd-----~V~VWDl~t~~-~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
. +|+|+.|+..++. +|.+||+.+.. ... ..+..+...+..+.|+ +..++++..
T Consensus 323 ~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~--~l~~~~~~~l~~~~~~--~~~lv~~~~ 381 (741)
T 1yr2_A 323 V-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFD--TVVPESKDNLESVGIA--GNRLFASYI 381 (741)
T ss_dssp E-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEE--EEECCCSSEEEEEEEE--BTEEEEEEE
T ss_pred E-eccCCEEEEEECCCCCCCEEEEEeCCCCccccE--EEecCCCCeEEEEEEE--CCEEEEEEE
Confidence 3 4899988877742 29999988752 211 2333344556677777 444555543
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.79 E-value=2.7e-07 Score=96.38 Aligned_cols=171 Identities=13% Similarity=0.063 Sum_probs=129.0
Q ss_pred EEEEEcCCCEEEEEeCCCeEEEEeCCCCC----CCCC-CCCeEEEEECCCCCeEEEEeC-CCeEEEEECCCCeEEEEEcc
Q 004217 74 FEAGRDARRGLASWVEAESLHHLRPKYCP----LSPP-PRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 74 ~vA~sd~g~~LaSgs~DgsIrlWd~~t~~----L~gH-~~sVtsVaFSpDG~~LASgs~-DGtVrVWDl~tg~~l~~L~g 147 (767)
.++...++..++ +.++.|..||. +++ +..+ ...+.++.+.+||++|++.+. ++.|..+|. +|+.+..+..
T Consensus 41 ~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~ 116 (276)
T 3no2_A 41 SVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEF 116 (276)
T ss_dssp EEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEE
T ss_pred CeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEec
Confidence 345566777777 45778888888 442 2333 346889999999999999887 788888885 6887776642
Q ss_pred ------CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcC
Q 004217 148 ------HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHK-LYIWRYN 220 (767)
Q Consensus 148 ------H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~ 220 (767)
+......+++.+ +++++++...++.|..||.. ++.+..+.....+.++.+.++|++++++.++. |..+|..
T Consensus 117 ~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 117 ETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp CCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred cCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 112345567888 89999999999999999998 99999887666777888999999998888664 9999999
Q ss_pred CCccccCCeEEecC------CCCeEEEEEccCCCeEEEE
Q 004217 221 MREETSSPRIVLRT------RRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 221 t~~~~~~~~~l~~h------~~~VtsVaFSPDG~~LlaS 253 (767)
+++.+. .+..+ -..+..+...++|..+++.
T Consensus 195 tG~~~w---~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 195 SNRIVR---RVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp TCCEEE---EEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCcEEE---EecCCCCCCccccccccceEcCCCCEEEEe
Confidence 888765 23221 2347888899999865554
No 196
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.78 E-value=1.3e-06 Score=91.09 Aligned_cols=170 Identities=8% Similarity=0.029 Sum_probs=111.0
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCC--CCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccC----CCCcE
Q 004217 80 ARRGLASWVEAESLHHLRPKYCPL--SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH----RRTPW 153 (767)
Q Consensus 80 ~g~~LaSgs~DgsIrlWd~~t~~L--~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH----~~~V~ 153 (767)
++..+++...++.|..||..++++ ......+.+++|+++|+++++ . +..|.+||.++++........ ...+.
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~ 101 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFN 101 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCC
Confidence 456666777788999999887642 234567999999999996554 3 568999999988754333221 23478
Q ss_pred EEEEccCCCcEEEEEeCC---------CeEEEEECCC-CeEEEeecCCCCeEEEEEcCCCCEEEEEE--CCcEEEEEcC-
Q 004217 154 VVRFHPLNPTIIASGSLD---------HEVRLWNAST-AECIGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYN- 220 (767)
Q Consensus 154 sLafsP~dg~lLaSgS~D---------GtVrIWDl~t-g~~i~~l~h~~~VtsVafSPdG~~LAsgS--dd~V~VWDl~- 220 (767)
.+.++| +++++++...+ ..-.||.+.. ++...........+.++|+|+++.|+.+. .++|.+||+.
T Consensus 102 di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~ 180 (297)
T 3g4e_A 102 DGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDL 180 (297)
T ss_dssp EEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECT
T ss_pred CEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccC
Confidence 899999 78877765322 2345555442 44433334445568899999999776665 3459999984
Q ss_pred -CCccccCCeEE---ecCCCCeEEEEEccCCCeEEEE
Q 004217 221 -MREETSSPRIV---LRTRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 221 -t~~~~~~~~~l---~~h~~~VtsVaFSPDG~~LlaS 253 (767)
++.... ...+ ..+......++++++|+.+++.
T Consensus 181 ~~G~~~~-~~~~~~~~~~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 181 QTGQISN-RRSVYKLEKEEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp TTCCEEE-EEEEEECCGGGCEEEEEEEBTTSCEEEEE
T ss_pred CCCcccC-cEEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 443211 1111 2234567899999999855443
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.73 E-value=7.5e-07 Score=91.63 Aligned_cols=176 Identities=10% Similarity=0.109 Sum_probs=118.3
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCCC----CC-----CCCCeEEEEECCCCCeEEEEeCC--------------
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCPL----SP-----PPRSTIAAAFSPDGKTLASTHGD-------------- 128 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~L----~g-----H~~sVtsVaFSpDG~~LASgs~D-------------- 128 (767)
...++...++..|+.+...+.|.+|+.+ +++ .. +...+.+++++++|+++++...+
T Consensus 73 ~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~ 151 (314)
T 1pjx_A 73 PAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEK 151 (314)
T ss_dssp EEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSS
T ss_pred CceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCC
Confidence 4445555552455555555578889987 532 11 12358899999999988877655
Q ss_pred -CeEEEEECCCCeEEEEEccCCCCcEEEEEc----cCCCc-EEEEEeCCCeEEEEECC-CCeE-----EEeec-CC-CCe
Q 004217 129 -HTVKIIDCQTGSCLKVLHGHRRTPWVVRFH----PLNPT-IIASGSLDHEVRLWNAS-TAEC-----IGSRD-FY-RPI 194 (767)
Q Consensus 129 -GtVrVWDl~tg~~l~~L~gH~~~V~sLafs----P~dg~-lLaSgS~DGtVrIWDl~-tg~~-----i~~l~-h~-~~V 194 (767)
+.|..||.. ++... +..+......++|+ | +++ ++++...++.|.+||+. +++. ...+. +. ..+
T Consensus 152 ~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p 228 (314)
T 1pjx_A 152 FGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGA 228 (314)
T ss_dssp CEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEE
T ss_pred CCeEEEECCC-CCEEE-eccCCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCC
Confidence 567778766 55433 33334456889999 9 665 45555678999999986 4542 12222 22 557
Q ss_pred EEEEEcCCCCEEEEEE-CCcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 195 ASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 195 tsVafSPdG~~LAsgS-dd~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
..++++++|+++++.. +++|.+||..+++... .+..+...+.+++|+|+|++|+++.
T Consensus 229 ~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~---~~~~~~~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 229 DGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKM---RIRCPFEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECTTCBSCSE---EEECSSSCEEEEEECTTSSEEEEEE
T ss_pred CceEECCCCCEEEEEcCCCEEEEEcCCCCcEeE---EEeCCCCCceeEEECCCCCEEEEEe
Confidence 8899999999877775 4569999987665433 3444557899999999999666554
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.73 E-value=3.4e-06 Score=85.53 Aligned_cols=174 Identities=10% Similarity=0.027 Sum_probs=123.4
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEc
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH 146 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~L-----~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~ 146 (767)
+..++...++...++...++.|..||.. +++ ..+...+.+++++++|+++++...++.|..||.. ++. ..+.
T Consensus 17 ~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~ 93 (299)
T 2z2n_A 17 PYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYT 93 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEE
T ss_pred ccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEe
Confidence 4455665666655555457889999987 432 2345679999999999988887778899999986 442 3332
Q ss_pred --cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee--cCCCCeEEEEEcCCCCEEEEEEC-CcEEEEEcCC
Q 004217 147 --GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASG-HKLYIWRYNM 221 (767)
Q Consensus 147 --gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l--~h~~~VtsVafSPdG~~LAsgSd-d~V~VWDl~t 221 (767)
.....+..+.+.+ +++++++...++.|.+||. +++..... .....+..++++++|+++++... +.|.+||. +
T Consensus 94 ~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~ 170 (299)
T 2z2n_A 94 LPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-S 170 (299)
T ss_dssp CSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred CCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C
Confidence 3456789999999 8888888878899999998 55544332 23467899999999987776654 55999998 5
Q ss_pred CccccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 004217 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 222 ~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaS 253 (767)
++... .........+..++++++|+.+++.
T Consensus 171 g~~~~--~~~~~~~~~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 171 GDITE--FKIPTPASGPVGITKGNDDALWFVE 200 (299)
T ss_dssp CCEEE--EECSSTTCCEEEEEECTTSSEEEEE
T ss_pred CcEEE--eeCCCCCCcceeEEECCCCCEEEEc
Confidence 44322 1122345568899999999855443
No 199
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.71 E-value=7e-07 Score=104.81 Aligned_cols=193 Identities=10% Similarity=0.009 Sum_probs=124.2
Q ss_pred eecccccceecCCcceEEEEEEcCCCEEEE-----EeCCCeEEEEeCCCCCC-CCCCCCe--EEEEECCCCCeEEEEeCC
Q 004217 57 RLLGETARKCSGSFSQIFEAGRDARRGLAS-----WVEAESLHHLRPKYCPL-SPPPRST--IAAAFSPDGKTLASTHGD 128 (767)
Q Consensus 57 ~~wd~~~~~~~~s~s~~~vA~sd~g~~LaS-----gs~DgsIrlWd~~t~~L-~gH~~sV--tsVaFSpDG~~LASgs~D 128 (767)
.++|.+...-...+....++++.+++.|+- |++...|++||+.+++. ..+...+ ..++|+ ||+.|+.++.+
T Consensus 116 vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~ 194 (693)
T 3iuj_A 116 VFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYD 194 (693)
T ss_dssp EEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESS
T ss_pred EEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEec
Confidence 344444332222333445567888888773 33345799999998853 2232233 578999 99999999887
Q ss_pred C-------------eEEEEECCCCeE--EEEE--cc-CCCCcEEEEEccCCCcEEEE-EeC---CCeEEEEECCCC--eE
Q 004217 129 H-------------TVKIIDCQTGSC--LKVL--HG-HRRTPWVVRFHPLNPTIIAS-GSL---DHEVRLWNASTA--EC 184 (767)
Q Consensus 129 G-------------tVrVWDl~tg~~--l~~L--~g-H~~~V~sLafsP~dg~lLaS-gS~---DGtVrIWDl~tg--~~ 184 (767)
. .|++|++.++.. ...+ .. |...+..+.|+| ++++|+. .+. ++.|++||+.++ +.
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~ 273 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPL 273 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCC
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCce
Confidence 4 399999987642 2233 33 455678899999 7776644 332 358999999876 33
Q ss_pred EEeecCCCCeEEEEEcCCCCEEEEEE-CC----cEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 185 IGSRDFYRPIASIAFHASGELLAVAS-GH----KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 185 i~~l~h~~~VtsVafSPdG~~LAsgS-dd----~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
.....+....... |+++|..|+..+ .+ +|.++|+.++.... ...+..|...+. .|++++++|+.+..
T Consensus 274 ~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~--~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 274 LTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAH-WRDLIPERQQVL--TVHSGSGYLFAEYM 345 (693)
T ss_dssp EEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGG-CEEEECCCSSCE--EEEEETTEEEEEEE
T ss_pred EEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccc-cEEEecCCCCEE--EEEEECCEEEEEEE
Confidence 4444444555554 677777655554 22 39999998765422 234566766665 89999998887654
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.71 E-value=3.4e-06 Score=85.49 Aligned_cols=175 Identities=10% Similarity=0.022 Sum_probs=124.0
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEE-Ec
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV-LH 146 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~-L~ 146 (767)
...++...++...++...++.|..|+.... .+......+.+++++++|+++++...++.|.+||. +++.... +.
T Consensus 59 ~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~ 137 (299)
T 2z2n_A 59 VMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELP 137 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred eeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCC
Confidence 445566566666666555788999987632 12234567999999999988888777889999998 5554332 23
Q ss_pred cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe-e-cCCCCeEEEEEcCCCCEEEEEE-CCcEEEEEcCCCc
Q 004217 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-R-DFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMRE 223 (767)
Q Consensus 147 gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~-l-~h~~~VtsVafSPdG~~LAsgS-dd~V~VWDl~t~~ 223 (767)
.+...+..+++.+ +++++++...++.|..||. +++.... . .....+..++++++|+++++.. .++|.+||. +++
T Consensus 138 ~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 138 NKGSYPSFITLGS-DNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE 214 (299)
T ss_dssp STTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CCCCCCceEEEcC-CCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc
Confidence 3456789999999 7888888777899999999 6665543 2 2345688999999999766654 455999998 554
Q ss_pred cccCCeEEecCCCCeEEEEEccCCCeEEE
Q 004217 224 ETSSPRIVLRTRRSLRAVHFHPHAAPLLL 252 (767)
Q Consensus 224 ~~~~~~~l~~h~~~VtsVaFSPDG~~Lla 252 (767)
... .....+...+.+++++++|+.+++
T Consensus 215 ~~~--~~~~~~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 215 ITE--FKIPTPNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp EEE--EECSSTTCCEEEEEECSTTCEEEE
T ss_pred EEE--EECCCCCCCceeEEECCCCCEEEe
Confidence 321 112234567899999999984444
No 201
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.67 E-value=2.5e-06 Score=98.62 Aligned_cols=135 Identities=10% Similarity=0.002 Sum_probs=104.5
Q ss_pred CCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECC--CCeEEEeecCCCCe
Q 004217 117 PDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS--TAECIGSRDFYRPI 194 (767)
Q Consensus 117 pDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~--tg~~i~~l~h~~~V 194 (767)
+++.++++...+++|.++|..+++.+..+.. ...+..+.|+| +++++++++.|+.|.+||+. +++.+..+......
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEA 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCC
Confidence 4455667777899999999999999888864 34567899999 89999999999999999996 88888887766677
Q ss_pred EEEEEc----CCCCEEEEEE--CCcEEEEEcCCCccccCCeEEe-------cC-CCCeEEEEEccCCCeEEEE
Q 004217 195 ASIAFH----ASGELLAVAS--GHKLYIWRYNMREETSSPRIVL-------RT-RRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 195 tsVafS----PdG~~LAsgS--dd~V~VWDl~t~~~~~~~~~l~-------~h-~~~VtsVaFSPDG~~LlaS 253 (767)
..++|+ |||++++++. .+.|.|+|..+.+.+....... .| ...+..+.+++++..++++
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 899999 7999998887 3559999998887654111100 02 2267889999988766654
No 202
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.67 E-value=5.4e-06 Score=87.88 Aligned_cols=168 Identities=13% Similarity=0.002 Sum_probs=110.9
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCCC--CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc---C-CCCcE
Q 004217 80 ARRGLASWVEAESLHHLRPKYCPLS--PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG---H-RRTPW 153 (767)
Q Consensus 80 ~g~~LaSgs~DgsIrlWd~~t~~L~--gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g---H-~~~V~ 153 (767)
++..+++...++.|..|+..++++. .....+.+++|+++|+++++. .+ .|.+||.++++....... . ...+.
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~ 137 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSN 137 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCC
Confidence 3556666667888999998776321 234679999999999877754 44 599999988875433221 1 13578
Q ss_pred EEEEccCCCcEEEEEeC------CCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEEC--CcEEEEEcC--CC-
Q 004217 154 VVRFHPLNPTIIASGSL------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG--HKLYIWRYN--MR- 222 (767)
Q Consensus 154 sLafsP~dg~lLaSgS~------DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSd--d~V~VWDl~--t~- 222 (767)
.+.++| +++++++... .+.|..+| +++.............++|+|+|+.|+.+.. +.|.+||+. ++
T Consensus 138 ~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl 214 (326)
T 2ghs_A 138 DGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGL 214 (326)
T ss_dssp EEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCC
T ss_pred CEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCC
Confidence 999999 7787776542 24566666 5554443333345778999999997766653 459999986 44
Q ss_pred ccccCCeEE---ecCCCCeEEEEEccCCCeEEEE
Q 004217 223 EETSSPRIV---LRTRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 223 ~~~~~~~~l---~~h~~~VtsVaFSPDG~~LlaS 253 (767)
.... ...+ .........++++++|..++++
T Consensus 215 ~~~~-~~~~~~~~~~~~~p~gi~~d~~G~lwva~ 247 (326)
T 2ghs_A 215 PTGK-AEVFIDSTGIKGGMDGSVCDAEGHIWNAR 247 (326)
T ss_dssp BSSC-CEEEEECTTSSSEEEEEEECTTSCEEEEE
T ss_pred cccC-ceEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 3211 1112 1234567889999999855554
No 203
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.67 E-value=1.9e-06 Score=89.85 Aligned_cols=179 Identities=11% Similarity=0.024 Sum_probs=119.6
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCCCC---C-----CCCCeEEEEECCCCCeEEEEeCC---------CeEEEE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCPLS---P-----PPRSTIAAAFSPDGKTLASTHGD---------HTVKII 134 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~L~---g-----H~~sVtsVaFSpDG~~LASgs~D---------GtVrVW 134 (767)
...++...++..++ +. +..|.+||.+++++. . ....+++++++++|+++++...+ ....||
T Consensus 56 ~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~ 133 (297)
T 3g4e_A 56 VSSVALRQSGGYVA-TI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALY 133 (297)
T ss_dssp EEEEEEBTTSSEEE-EE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEE
T ss_pred eEEEEECCCCCEEE-EE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEE
Confidence 45566667777444 44 568999998776321 1 12347899999999977654321 233555
Q ss_pred ECCC-CeEEEEEccCCCCcEEEEEccCCCc-EEEEEeCCCeEEEEEC--CCCeEE-----Eeec-CCCCeEEEEEcCCCC
Q 004217 135 DCQT-GSCLKVLHGHRRTPWVVRFHPLNPT-IIASGSLDHEVRLWNA--STAECI-----GSRD-FYRPIASIAFHASGE 204 (767)
Q Consensus 135 Dl~t-g~~l~~L~gH~~~V~sLafsP~dg~-lLaSgS~DGtVrIWDl--~tg~~i-----~~l~-h~~~VtsVafSPdG~ 204 (767)
.+.. ++.. .+..+......++|+| +++ ++++.+.++.|.+||+ .++... ..+. .......++++++|+
T Consensus 134 ~~d~~g~~~-~~~~~~~~pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 134 SLFPDHHVK-KYFDQVDISNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK 211 (297)
T ss_dssp EECTTSCEE-EEEEEESBEEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC
T ss_pred EEECCCCEE-EEeeccccccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC
Confidence 5443 3333 3333445568899999 665 5566677899999997 455432 1121 235678899999998
Q ss_pred EEEEEECC-cEEEEEcCCCccccCCeEEecCCCCeEEEEEc-cCCCeEEEEEeeC
Q 004217 205 LLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFH-PHAAPLLLTAEVN 257 (767)
Q Consensus 205 ~LAsgSdd-~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFS-PDG~~LlaSgsvw 257 (767)
+.++...+ +|.+||..+++.+. .+..+...+++++|. ||++.|.++....
T Consensus 212 lwva~~~~~~v~~~d~~tG~~~~---~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 212 LWVACYNGGRVIRLDPVTGKRLQ---TVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEEEEETTTEEEEECTTTCCEEE---EEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEEEEcCCCEEEEEcCCCceEEE---EEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 77776654 49999998877644 444555789999999 8999887776533
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.66 E-value=1.5e-06 Score=90.87 Aligned_cols=173 Identities=13% Similarity=0.049 Sum_probs=115.2
Q ss_pred EEEEcCCC-EEEEEeCCCeEEEEeCCCC--CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEc---cC
Q 004217 75 EAGRDARR-GLASWVEAESLHHLRPKYC--PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH---GH 148 (767)
Q Consensus 75 vA~sd~g~-~LaSgs~DgsIrlWd~~t~--~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~---gH 148 (767)
.++..+++ .+++...++.|..|+.... .+..+...+..++++++|+++++...++.|.+||.+ ++...... +.
T Consensus 50 p~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~ 128 (305)
T 3dr2_A 50 PAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGK 128 (305)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTE
T ss_pred CeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCC
Confidence 33444554 6777778889999987432 233456678999999999977766667899999986 65332221 11
Q ss_pred -CCCcEEEEEccCCCcEEEE----EeC-------------CCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEE
Q 004217 149 -RRTPWVVRFHPLNPTIIAS----GSL-------------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS 210 (767)
Q Consensus 149 -~~~V~sLafsP~dg~lLaS----gS~-------------DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgS 210 (767)
...+..+.++| +++++++ |.. .+.|..||..+++..... .......++|+|+|+.|+++.
T Consensus 129 ~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~ 206 (305)
T 3dr2_A 129 RLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQ 206 (305)
T ss_dssp ECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEE
T ss_pred ccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEe
Confidence 13467899999 8888886 332 256888888777655444 445678899999999777765
Q ss_pred C-------CcEEEEEcCCCccccCCeEE-ecCCCCeEEEEEccCCCeEE
Q 004217 211 G-------HKLYIWRYNMREETSSPRIV-LRTRRSLRAVHFHPHAAPLL 251 (767)
Q Consensus 211 d-------d~V~VWDl~t~~~~~~~~~l-~~h~~~VtsVaFSPDG~~Ll 251 (767)
. +.|++||+.... +.....+ .........++++++|+.++
T Consensus 207 ~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv 254 (305)
T 3dr2_A 207 TPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWS 254 (305)
T ss_dssp CCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEE
T ss_pred cCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEE
Confidence 4 359999987654 2111111 11234456789999998443
No 205
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.63 E-value=7.4e-07 Score=104.27 Aligned_cols=175 Identities=9% Similarity=-0.078 Sum_probs=119.5
Q ss_pred EEEEEcCCCEEEEEeCCCe-------------EEEEeCCCCC--------CCCCCCCeEEEEECCCCCeEEEEeCCC---
Q 004217 74 FEAGRDARRGLASWVEAES-------------LHHLRPKYCP--------LSPPPRSTIAAAFSPDGKTLASTHGDH--- 129 (767)
Q Consensus 74 ~vA~sd~g~~LaSgs~Dgs-------------IrlWd~~t~~--------L~gH~~sVtsVaFSpDG~~LASgs~DG--- 129 (767)
.++++.+++.|+..+.+.. |++|++.+++ ...|...+..+.|||||++|+..+.++
T Consensus 172 ~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~ 251 (695)
T 2bkl_A 172 TPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSE 251 (695)
T ss_dssp CCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTE
T ss_pred ceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCc
Confidence 4667788899998888776 9999998753 224556899999999999998888766
Q ss_pred -eEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEe---CCCeEEEEECCCCeE---EEeecC--CCCeEEEEEc
Q 004217 130 -TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS---LDHEVRLWNASTAEC---IGSRDF--YRPIASIAFH 200 (767)
Q Consensus 130 -tVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS---~DGtVrIWDl~tg~~---i~~l~h--~~~VtsVafS 200 (767)
.|++||..+++ ...+..+...+....| + ++++++... .++.|.+||+.+++. ...+.+ ...+..++|+
T Consensus 252 ~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~-~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~ 328 (695)
T 2bkl_A 252 NDVYWKRPGEKD-FRLLVKGVGAKYEVHA-W-KDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV 328 (695)
T ss_dssp EEEEEECTTCSS-CEEEEECSSCCEEEEE-E-TTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE
T ss_pred eEEEEEcCCCCc-eEEeecCCCceEEEEe-c-CCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE
Confidence 67778766665 4455556666777777 4 344666554 358899999988753 333433 4457888888
Q ss_pred CCCCEEEEEECCc-EEEEEcC-CCccccCCeEEecC-CCCeEEEEEccCCCeEEEEEe
Q 004217 201 ASGELLAVASGHK-LYIWRYN-MREETSSPRIVLRT-RRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 201 PdG~~LAsgSdd~-V~VWDl~-t~~~~~~~~~l~~h-~~~VtsVaFSPDG~~LlaSgs 255 (767)
++.++++...++ .+||.+. .++... .+..+ ...|..+.++||++.++.+..
T Consensus 329 -~~~lv~~~~~dg~~~l~~~~~~g~~~~---~l~~~~~~~v~~~~~s~d~~~l~~~~s 382 (695)
T 2bkl_A 329 -GGHLSLEYLKDATSEVRVATLKGKPVR---TVQLPGVGAASNLMGLEDLDDAYYVFT 382 (695)
T ss_dssp -TTEEEEEEEETTEEEEEEEETTCCEEE---ECCCSSSSEECCCBSCTTCSEEEEEEE
T ss_pred -CCEEEEEEEECCEEEEEEEeCCCCeeE---EecCCCCeEEEEeecCCCCCEEEEEEc
Confidence 666777776544 5555443 233222 23333 567888999999987776543
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.58 E-value=5.2e-06 Score=90.66 Aligned_cols=170 Identities=12% Similarity=0.054 Sum_probs=109.2
Q ss_pred EEEEEcCCCEEEEEe----------CCCeEEEEeCCCCCCCCC-----------CCCeEEEEECCCCCeEEEEeC--CCe
Q 004217 74 FEAGRDARRGLASWV----------EAESLHHLRPKYCPLSPP-----------PRSTIAAAFSPDGKTLASTHG--DHT 130 (767)
Q Consensus 74 ~vA~sd~g~~LaSgs----------~DgsIrlWd~~t~~L~gH-----------~~sVtsVaFSpDG~~LASgs~--DGt 130 (767)
-++++.+++.++... .++.|.+||..+.+..+. ...-..++|+|||++|+.+.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 577778888888775 367899999987532210 123458999999999998874 578
Q ss_pred EEEEECCCCeEEEE-EccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEE-----------------------
Q 004217 131 VKIIDCQTGSCLKV-LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIG----------------------- 186 (767)
Q Consensus 131 VrVWDl~tg~~l~~-L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~----------------------- 186 (767)
|.++| ++++.+.. +... . ++.+.|.+.+.+++.+.||++.+||. +++...
T Consensus 150 v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred EEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 99999 99988777 5421 1 13333433344555555666555555 433221
Q ss_pred ---------------------------eecC-----------CCCeEEEEEcCCCCEEEEEEC-----------CcEEEE
Q 004217 187 ---------------------------SRDF-----------YRPIASIAFHASGELLAVASG-----------HKLYIW 217 (767)
Q Consensus 187 ---------------------------~l~h-----------~~~VtsVafSPdG~~LAsgSd-----------d~V~VW 217 (767)
.+.. ......++++|+++.++++.. +.|.++
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI 303 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence 0100 111223678899887777542 349999
Q ss_pred EcCCCccccCCeEEecCCCCeEEEEEccCCC-eEEEE
Q 004217 218 RYNMREETSSPRIVLRTRRSLRAVHFHPHAA-PLLLT 253 (767)
Q Consensus 218 Dl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~-~LlaS 253 (767)
|+.+.+.+. .+ ........++|+|||+ .++++
T Consensus 304 D~~t~~vv~---~i-~~g~~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 304 TGLVGQTSS---QI-SLGHDVDAISVAQDGGPDLYAL 336 (373)
T ss_pred ECCCCEEEE---EE-ECCCCcCeEEECCCCCeEEEEE
Confidence 999887655 22 2334688999999999 44444
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.56 E-value=1.8e-05 Score=80.09 Aligned_cols=175 Identities=9% Similarity=0.002 Sum_probs=123.0
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC-----CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEE-EE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP-----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLK-VL 145 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~-----L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~-~L 145 (767)
...++...++...++...++.|.+|+.. ++ +..+...+.+++++++|+++++...++.|.+||.. ++... .+
T Consensus 22 p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~ 99 (300)
T 2qc5_A 22 PYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPL 99 (300)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEC
T ss_pred cceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecC
Confidence 4555665666655555567889999887 43 22344679999999999988877778899999988 65432 22
Q ss_pred ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe-ec-CCCCeEEEEEcCCCCEEEEEE-CCcEEEEEcCCC
Q 004217 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-RD-FYRPIASIAFHASGELLAVAS-GHKLYIWRYNMR 222 (767)
Q Consensus 146 ~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~-l~-h~~~VtsVafSPdG~~LAsgS-dd~V~VWDl~t~ 222 (767)
......+..+++.+ +++++++...++.|..||.. ++.... +. ....+..++++++|+++++.. .+.|.+||. ++
T Consensus 100 ~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 176 (300)
T 2qc5_A 100 PQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TG 176 (300)
T ss_dssp SSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CC
Confidence 22446789999998 88888887778899999987 555432 22 346789999999999666555 345999998 44
Q ss_pred ccccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 004217 223 EETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 223 ~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaS 253 (767)
+... .....+...+..++++++|..+++.
T Consensus 177 ~~~~--~~~~~~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 177 KLEE--YPLPTNAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp CEEE--EECSSTTCCEEEEEECTTSSEEEEE
T ss_pred cEEE--eeCCCCCCCcceEEECCCCCEEEEc
Confidence 3322 1122344578999999999855443
No 208
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.55 E-value=6.1e-07 Score=99.21 Aligned_cols=125 Identities=13% Similarity=0.009 Sum_probs=100.1
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
...+++ ++..|+.+ .++.|++||+... .+..|...|.++.+.+. .++++..||.|.+||+.++....
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---- 160 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---- 160 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----
Confidence 555666 77888888 8899999998654 24466778888888764 38889999999999999887643
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeE--EEee----------cCCCCeEEEEEcCCCCEEEE
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC--IGSR----------DFYRPIASIAFHASGELLAV 208 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~--i~~l----------~h~~~VtsVafSPdG~~LAs 208 (767)
+...|.+++|+| ++ ++.|..||++++|+...+++ .+.+ .+...|.+|.|.+++.++++
T Consensus 161 ~~~~Vs~v~WSp-kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 161 LAQNVTSFDVTN-SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEESEEEEEECS-SE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ccCCceEEEEcC-Cc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 345799999999 55 67899999999999988775 5555 26788999999999988874
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.55 E-value=2.9e-05 Score=84.75 Aligned_cols=125 Identities=10% Similarity=-0.041 Sum_probs=86.8
Q ss_pred eEEEEeCCCCCCC----CCCCCeEEEEECCCCCeEEEEe----------CCCeEEEEECCCCeEEEEEccC-------CC
Q 004217 92 SLHHLRPKYCPLS----PPPRSTIAAAFSPDGKTLASTH----------GDHTVKIIDCQTGSCLKVLHGH-------RR 150 (767)
Q Consensus 92 sIrlWd~~t~~L~----gH~~sVtsVaFSpDG~~LASgs----------~DGtVrVWDl~tg~~l~~L~gH-------~~ 150 (767)
.|.++|..+.++. .-..+ .++|||||++|+.+. .++.|.+||..+++.+..+.-. ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 7788888776422 22222 999999999998886 3678999999998877766422 12
Q ss_pred CcEEEEEccCCCcEEEEEeC--CCeEEEEECCCCeEEEe-ecCCCCeEEEEEcCCCC--EEEEEECCcEEEEEcCCCcc
Q 004217 151 TPWVVRFHPLNPTIIASGSL--DHEVRLWNASTAECIGS-RDFYRPIASIAFHASGE--LLAVASGHKLYIWRYNMREE 224 (767)
Q Consensus 151 ~V~sLafsP~dg~lLaSgS~--DGtVrIWDl~tg~~i~~-l~h~~~VtsVafSPdG~--~LAsgSdd~V~VWDl~t~~~ 224 (767)
....+.|+| ++++|+.+.. +++|.++| .+++.+.. +..... +.+.|++. +++.+.++++.+||. +++.
T Consensus 126 ~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~ 198 (373)
T 2mad_H 126 YSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGA 198 (373)
T ss_pred CccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcE
Confidence 356899999 8888887764 58899999 99998887 664433 34445553 333333455777777 5544
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.54 E-value=2.2e-05 Score=79.51 Aligned_cols=175 Identities=10% Similarity=0.011 Sum_probs=122.3
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCC-----CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEE-E
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCP-----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV-L 145 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~-----L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~-L 145 (767)
...++...++...++...++.|..+|.. ++ +......+.+++++++|+++++...++.|..||.+ ++.... +
T Consensus 64 ~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~ 141 (300)
T 2qc5_A 64 VMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDL 141 (300)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEEC
T ss_pred ceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccC
Confidence 4455555566655555557889999887 42 22234679999999999988887778899999987 654422 3
Q ss_pred ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe-e-cCCCCeEEEEEcCCCCEEEEEEC-CcEEEEEcCCC
Q 004217 146 HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-R-DFYRPIASIAFHASGELLAVASG-HKLYIWRYNMR 222 (767)
Q Consensus 146 ~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~-l-~h~~~VtsVafSPdG~~LAsgSd-d~V~VWDl~t~ 222 (767)
......+..+.+.+ +++++++...++.|..||. +++.... . .....+..++++++|+++++... +.|.+||. ++
T Consensus 142 ~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 218 (300)
T 2qc5_A 142 PNKGSYPAFITLGS-DNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TG 218 (300)
T ss_dssp SSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCCCceeEEECC-CCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CC
Confidence 33456789999999 7888887777889999998 5554432 2 23456889999999987766654 45999998 33
Q ss_pred ccccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 004217 223 EETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 223 ~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaS 253 (767)
+... .....+...+.+++++++|+.++++
T Consensus 219 ~~~~--~~~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 219 EISE--YDIPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp CEEE--EECSSTTCCEEEEEECSTTCEEEEE
T ss_pred cEEE--EECCCCCCCceEEEECCCCCEEEec
Confidence 3222 1122345678999999999854443
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.52 E-value=1.1e-05 Score=85.62 Aligned_cols=174 Identities=14% Similarity=0.107 Sum_probs=113.4
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCCCC---C----C-CCCeEEEEECCCCCeEEEEeC------CCeEEEEECC
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCPLS---P----P-PRSTIAAAFSPDGKTLASTHG------DHTVKIIDCQ 137 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~L~---g----H-~~sVtsVaFSpDG~~LASgs~------DGtVrVWDl~ 137 (767)
...++...++..++. .. ..|.+||..++++. . . ...+.+++++++|+++++... .+.|..+|
T Consensus 92 v~~i~~~~dg~l~v~-~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-- 167 (326)
T 2ghs_A 92 GSALAKISDSKQLIA-SD-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-- 167 (326)
T ss_dssp EEEEEEEETTEEEEE-ET-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--
T ss_pred ceEEEEeCCCeEEEE-EC-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--
Confidence 444555556665554 44 45889998766421 1 1 235889999999997765542 24566666
Q ss_pred CCeEEEEEccCCCCcEEEEEccCCCcE-EEEEeCCCeEEEEECC--CC-eE-----EEeec-CCCCeEEEEEcCCCCEEE
Q 004217 138 TGSCLKVLHGHRRTPWVVRFHPLNPTI-IASGSLDHEVRLWNAS--TA-EC-----IGSRD-FYRPIASIAFHASGELLA 207 (767)
Q Consensus 138 tg~~l~~L~gH~~~V~sLafsP~dg~l-LaSgS~DGtVrIWDl~--tg-~~-----i~~l~-h~~~VtsVafSPdG~~LA 207 (767)
+++.. .+..+......++|+| +++. +++.+.++.|.+||+. ++ +. ...+. ....+..++++++|++++
T Consensus 168 ~g~~~-~~~~~~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwv 245 (326)
T 2ghs_A 168 KGKVT-KLFADISIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWN 245 (326)
T ss_dssp TTEEE-EEEEEESSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEE
T ss_pred CCcEE-EeeCCCcccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEE
Confidence 56543 3333334577899999 6664 4555667899999986 55 32 22222 234567899999998777
Q ss_pred EEEC-CcEEEEEcCCCccccCCeEEecCCCCeEEEEEc-cCCCeEEEEEe
Q 004217 208 VASG-HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFH-PHAAPLLLTAE 255 (767)
Q Consensus 208 sgSd-d~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFS-PDG~~LlaSgs 255 (767)
+... ++|.+||. +++... .+..+...+++++|+ ++++.|+++..
T Consensus 246 a~~~~~~v~~~d~-~g~~~~---~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 246 ARWGEGAVDRYDT-DGNHIA---RYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEETTTEEEEECT-TCCEEE---EEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred EEeCCCEEEEECC-CCCEEE---EEECCCCCcEEEEEecCCCCEEEEEec
Confidence 6654 56999998 444332 344455679999998 89887776654
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.48 E-value=4.6e-06 Score=92.14 Aligned_cols=247 Identities=13% Similarity=0.066 Sum_probs=148.9
Q ss_pred EEEEcCCCEEEEEe----------CCCeEEEEeCCCCCCCC-----C------CCCeEEEEECCCCCeEEEEeC--CCeE
Q 004217 75 EAGRDARRGLASWV----------EAESLHHLRPKYCPLSP-----P------PRSTIAAAFSPDGKTLASTHG--DHTV 131 (767)
Q Consensus 75 vA~sd~g~~LaSgs----------~DgsIrlWd~~t~~L~g-----H------~~sVtsVaFSpDG~~LASgs~--DGtV 131 (767)
++++.+++.++... .++.|.+||..+.+... . ...-..++|+|||++|+.+.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 77888888887665 36789999998874221 1 124567999999999988864 6899
Q ss_pred EEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCC-CeEEEeec-C----CCCeE-EEEEc-CCC
Q 004217 132 KIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST-AECIGSRD-F----YRPIA-SIAFH-ASG 203 (767)
Q Consensus 132 rVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~t-g~~i~~l~-h----~~~Vt-sVafS-PdG 203 (767)
.|+|+.+++.+.++.... . ..+.|.+.+.+++.+.||++.+.++.+ ++...... . ..++. ...|. ++|
T Consensus 163 sVID~~t~~vv~tI~v~g--~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPD--C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred EEEECCCCcEEEEEECCC--c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 999999999998885321 1 223353667888889999999999986 55433211 1 12221 24664 788
Q ss_pred CEEEEEECCcEEEEEcCCCcccc-CCeEEe--------cCCCCeEEEEEccCCCeEEEEEeeCCcCCCCcceeEeecCCC
Q 004217 204 ELLAVASGHKLYIWRYNMREETS-SPRIVL--------RTRRSLRAVHFHPHAAPLLLTAEVNDLDSSESSLTLATSPGY 274 (767)
Q Consensus 204 ~~LAsgSdd~V~VWDl~t~~~~~-~~~~l~--------~h~~~VtsVaFSPDG~~LlaSgsvwdl~s~~~~~~l~t~sG~ 274 (767)
+++++..++.|++.|+.+..... ....+. ........++++++++.+.++.....-.. |
T Consensus 239 ~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~------------h 306 (386)
T 3sjl_D 239 RLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWR------------H 306 (386)
T ss_dssp EEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTC------------T
T ss_pred cEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccc------------c
Confidence 77666666669999997664211 011100 01223445778999998877643111000 0
Q ss_pred ccCCCCeEEEecCCCCCCC-ceeeccCCCCCCceeeEEecCCC-EEEEeecCCCCCCcccccccccCCceeeeeccCCCC
Q 004217 275 WRYPPPVICMAGAHSSSHP-GLAEEVPLITPPFLRPSFVRDDE-RISLQHTEHDSGATRTQQSLRSSSSVRLLTYSTPSG 352 (767)
Q Consensus 275 ~~~p~~~v~l~~~~Ssd~~-~L~sg~~~~slpil~psFSpDg~-rIva~~~~~d~Gs~~~~~~~~ss~~~~l~~~~~~~~ 352 (767)
+.+...+.+-+..+.... .+..+ .+.+.+.|++|++ ++++... .+..+-.+|..++
T Consensus 307 -k~~~~~V~viD~~t~kv~~~i~vg-----~~~~~lavs~D~~~~ly~tn~----------------~~~~VsViD~~t~ 364 (386)
T 3sjl_D 307 -KTASRFVVVLDAKTGERLAKFEMG-----HEIDSINVSQDEKPLLYALST----------------GDKTLYIHDAESG 364 (386)
T ss_dssp -TSCEEEEEEEETTTCCEEEEEEEE-----EEECEEEECSSSSCEEEEEET----------------TTTEEEEEETTTC
T ss_pred -CCCCCEEEEEECCCCeEEEEEECC-----CCcceEEECCCCCeEEEEEcC----------------CCCeEEEEECCCC
Confidence 111122333332222211 12222 2566899999997 6666111 1234567777777
Q ss_pred ceeeeec
Q 004217 353 QYELVLS 359 (767)
Q Consensus 353 q~~~~~~ 359 (767)
+.-..+.
T Consensus 365 k~~~~i~ 371 (386)
T 3sjl_D 365 EELRSVN 371 (386)
T ss_dssp CEEEEEC
T ss_pred cEEEEec
Confidence 7666663
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.47 E-value=7.2e-06 Score=90.46 Aligned_cols=174 Identities=9% Similarity=-0.037 Sum_probs=116.7
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCCCC---CCCCCeEEEEECCCCCeEEEEeCCC--eEEEEECCCCeEEEEE-
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCPLS---PPPRSTIAAAFSPDGKTLASTHGDH--TVKIIDCQTGSCLKVL- 145 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~L~---gH~~sVtsVaFSpDG~~LASgs~DG--tVrVWDl~tg~~l~~L- 145 (767)
+..+++..++..+++...++.|++||..++++. ....... ++|+++++.|+++..++ .|.+||..++.....+
T Consensus 133 P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g 211 (409)
T 3hrp_A 133 MWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIG 211 (409)
T ss_dssp EEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEE
T ss_pred ceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEee
Confidence 666777777776666667789999999876321 1122233 99999999999888866 8999998766544444
Q ss_pred ---ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe----e-cCCCCe--EEEEEcCCCCEEEEEE-C-Cc
Q 004217 146 ---HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS----R-DFYRPI--ASIAFHASGELLAVAS-G-HK 213 (767)
Q Consensus 146 ---~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~----l-~h~~~V--tsVafSPdG~~LAsgS-d-d~ 213 (767)
......+.+++++|.++.+++ +..++.|+.||..++..... . ...... ..++|+|++..|.++. . +.
T Consensus 212 ~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~ 290 (409)
T 3hrp_A 212 QLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSS 290 (409)
T ss_dssp ECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTE
T ss_pred eccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCE
Confidence 224567889999994444444 77789999999987764332 1 111222 2899999655555554 3 44
Q ss_pred EEEEEcCCCccccCCeEEecC---------------CCCeEEEEEccCCCeEEE
Q 004217 214 LYIWRYNMREETSSPRIVLRT---------------RRSLRAVHFHPHAAPLLL 252 (767)
Q Consensus 214 V~VWDl~t~~~~~~~~~l~~h---------------~~~VtsVaFSPDG~~Lla 252 (767)
|+.||..... . .+.++ -.....++|+|+|+.+++
T Consensus 291 I~~~~~~g~~--~---~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 291 VYKITPDGEC--E---WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp EEEECTTCCE--E---EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred EEEEecCCCE--E---EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 9999876431 1 22222 245789999999994443
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.47 E-value=1e-05 Score=89.30 Aligned_cols=172 Identities=10% Similarity=-0.033 Sum_probs=116.9
Q ss_pred EEEEcCCCEEEEEeCCC--eEEEEeCCCCC----C----CCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEE
Q 004217 75 EAGRDARRGLASWVEAE--SLHHLRPKYCP----L----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV 144 (767)
Q Consensus 75 vA~sd~g~~LaSgs~Dg--sIrlWd~~t~~----L----~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~ 144 (767)
+++..+++.|+....++ .|..|+..... + ......+.+++++|++..|+.+..++.|+.||..++.....
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 56667777888777655 78888876542 1 22456788999999555565577789999999987764322
Q ss_pred ----EccCCCCc-E-EEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecC---------------CCCeEEEEEcCCC
Q 004217 145 ----LHGHRRTP-W-VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF---------------YRPIASIAFHASG 203 (767)
Q Consensus 145 ----L~gH~~~V-~-sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h---------------~~~VtsVafSPdG 203 (767)
..++...- . .++|+|.++.++++-..++.|+.||.... ....... -.....++|+++|
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG 334 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG 334 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC
Confidence 22232222 3 99999966778888888899999997654 2222222 1347899999999
Q ss_pred CEEEEEE-CC-cEEEEEcCCCccccCCeEEecC---------------CCCeEEEEEccCCCeEE
Q 004217 204 ELLAVAS-GH-KLYIWRYNMREETSSPRIVLRT---------------RRSLRAVHFHPHAAPLL 251 (767)
Q Consensus 204 ~~LAsgS-dd-~V~VWDl~t~~~~~~~~~l~~h---------------~~~VtsVaFSPDG~~Ll 251 (767)
+++++-. .+ +|+.||+.++... .+.++ -.....|+++++|..++
T Consensus 335 ~lyvad~~~~~~I~~~~~~~G~v~----~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyV 395 (409)
T 3hrp_A 335 NFYIVDGFKGYCLRKLDILDGYVS----TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWI 395 (409)
T ss_dssp CEEEEETTTTCEEEEEETTTTEEE----EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEE
T ss_pred CEEEEeCCCCCEEEEEECCCCEEE----EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEE
Confidence 9666655 44 4999997766532 23332 24578999999976433
No 215
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.44 E-value=9.3e-06 Score=95.78 Aligned_cols=172 Identities=15% Similarity=0.039 Sum_probs=110.4
Q ss_pred EEEEcCCCEEEEEeCCC--------------eEEEEeCCCCC--------CCCCCCCeEEEEECCCCCeEEEEeCCC---
Q 004217 75 EAGRDARRGLASWVEAE--------------SLHHLRPKYCP--------LSPPPRSTIAAAFSPDGKTLASTHGDH--- 129 (767)
Q Consensus 75 vA~sd~g~~LaSgs~Dg--------------sIrlWd~~t~~--------L~gH~~sVtsVaFSpDG~~LASgs~DG--- 129 (767)
++++.+ +.|+....++ .|++|++.+.+ ...+...+..+.|||||++|+..+.++
T Consensus 214 ~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~ 292 (741)
T 1yr2_A 214 LAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDP 292 (741)
T ss_dssp CEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCS
T ss_pred EEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCC
Confidence 345556 6666666544 38899986652 123344689999999999998887654
Q ss_pred --eEEEEECCCC--eEEEEEccCCCCcEEEEEccCCCcEEEEEeC----CCeEEEEECCCC--eEEEeecC-CCCeEEEE
Q 004217 130 --TVKIIDCQTG--SCLKVLHGHRRTPWVVRFHPLNPTIIASGSL----DHEVRLWNASTA--ECIGSRDF-YRPIASIA 198 (767)
Q Consensus 130 --tVrVWDl~tg--~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~----DGtVrIWDl~tg--~~i~~l~h-~~~VtsVa 198 (767)
.|++||+.++ ++...+..+...+.... +| +++.|+..+. ++.|.+||+.++ +....+.+ ...+..++
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~ 370 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DG-VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVG 370 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEEE-EE-ETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEEE-ec-cCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEE
Confidence 8999999887 31455655665565554 47 6666666654 345999999884 33333443 34466777
Q ss_pred EcCCCCEEEEEECCc---EEEEEcCCCccccCCeEEec-CCCCeEEEEEccCCCeEEEEE
Q 004217 199 FHASGELLAVASGHK---LYIWRYNMREETSSPRIVLR-TRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 199 fSPdG~~LAsgSdd~---V~VWDl~t~~~~~~~~~l~~-h~~~VtsVaFSPDG~~LlaSg 254 (767)
|+ ++.++++...++ |+++|+. ++... .+.. +...+..+.++||++.++.+.
T Consensus 371 ~~-~~~lv~~~~~dg~~~l~~~~~~-g~~~~---~l~~~~~~~v~~~~~s~d~~~l~~~~ 425 (741)
T 1yr2_A 371 IA-GNRLFASYIHDAKSQVLAFDLD-GKPAG---AVSLPGIGSASGLSGRPGDRHAYLSF 425 (741)
T ss_dssp EE-BTEEEEEEEETTEEEEEEEETT-SCEEE---ECBCSSSCEEEEEECCBTCSCEEEEE
T ss_pred EE-CCEEEEEEEECCEEEEEEEeCC-CCcee---eccCCCCeEEEEeecCCCCCEEEEEE
Confidence 77 555666666444 4445543 33222 2222 356788999999998777554
No 216
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.43 E-value=9.2e-06 Score=86.60 Aligned_cols=148 Identities=9% Similarity=-0.019 Sum_probs=100.9
Q ss_pred CCCCCeEEEEECCCCCeEEEEeC-----CCeEEEEECCCCeEEEEEccC------CCCcEEEEEccCCCcEEEEEe---C
Q 004217 105 PPPRSTIAAAFSPDGKTLASTHG-----DHTVKIIDCQTGSCLKVLHGH------RRTPWVVRFHPLNPTIIASGS---L 170 (767)
Q Consensus 105 gH~~sVtsVaFSpDG~~LASgs~-----DGtVrVWDl~tg~~l~~L~gH------~~~V~sLafsP~dg~lLaSgS---~ 170 (767)
+|...+..++|+++|+++++-.. ++.|.+||+++++.+..+... ...+..+++++.++..+++.. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 45678999999999887665543 579999999999977766432 235688999984456667766 6
Q ss_pred CCeEEEEECCCCeEEEeecC------------------------------CCCeEEEEEcCCCCEEEEEECCc--EEEEE
Q 004217 171 DHEVRLWNASTAECIGSRDF------------------------------YRPIASIAFHASGELLAVASGHK--LYIWR 218 (767)
Q Consensus 171 DGtVrIWDl~tg~~i~~l~h------------------------------~~~VtsVafSPdG~~LAsgSdd~--V~VWD 218 (767)
++.|.+||+.+++..+.+.. ...+..++|+|+|+.|+++...+ |+.+|
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 88999999998876664421 02358899999999888887433 66665
Q ss_pred cCC---Cc----cccCCeEEecCCCCeEEEEEccCCCeEEE
Q 004217 219 YNM---RE----ETSSPRIVLRTRRSLRAVHFHPHAAPLLL 252 (767)
Q Consensus 219 l~t---~~----~~~~~~~l~~h~~~VtsVaFSPDG~~Lla 252 (767)
... .. .........++......++++++|..+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va 264 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVG 264 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEE
T ss_pred HHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEE
Confidence 421 11 00001122234456678999999985444
No 217
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.38 E-value=2.2e-05 Score=88.24 Aligned_cols=173 Identities=11% Similarity=0.114 Sum_probs=116.7
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCC--CCC-------------CCCeEEEEECCCCCeEEEEeCC------CeEEEEECCC
Q 004217 80 ARRGLASWVEAESLHHLRPKYCPL--SPP-------------PRSTIAAAFSPDGKTLASTHGD------HTVKIIDCQT 138 (767)
Q Consensus 80 ~g~~LaSgs~DgsIrlWd~~t~~L--~gH-------------~~sVtsVaFSpDG~~LASgs~D------GtVrVWDl~t 138 (767)
.+..++.+..+..|.++|..+... +-+ ...-..+..+||| +++++..+ +.|.++|.++
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 334445667788899999875411 100 1134567889999 77776665 7899999999
Q ss_pred CeEEEEEccCC---CCcEEEEEccCCCcEEEEEe-------------------CCCeEEEEECCCCeEEEeecCC---CC
Q 004217 139 GSCLKVLHGHR---RTPWVVRFHPLNPTIIASGS-------------------LDHEVRLWNASTAECIGSRDFY---RP 193 (767)
Q Consensus 139 g~~l~~L~gH~---~~V~sLafsP~dg~lLaSgS-------------------~DGtVrIWDl~tg~~i~~l~h~---~~ 193 (767)
++.+.++.... .--+.+.|+| +.+.+++.. .+.+|.+||+.+++.+.++... ..
T Consensus 174 ~~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~ 252 (462)
T 2ece_A 174 FEPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM 252 (462)
T ss_dssp CCEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred CeEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence 99998886322 2234688899 888888874 3789999999999888877653 23
Q ss_pred eEEEEE--cCCCCEEEEEEC-----C--cEEEEEcCCCccccCCeEE-------ec-----------CCCCeEEEEEccC
Q 004217 194 IASIAF--HASGELLAVASG-----H--KLYIWRYNMREETSSPRIV-------LR-----------TRRSLRAVHFHPH 246 (767)
Q Consensus 194 VtsVaf--SPdG~~LAsgSd-----d--~V~VWDl~t~~~~~~~~~l-------~~-----------h~~~VtsVaFSPD 246 (767)
...+.| +|+|+++.++.. . .|.+|..+.++... ...+ .+ .......|.+|||
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~-~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNA-EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEE-EEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeE-EEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 445655 999998777764 3 37766655432110 0000 00 0245789999999
Q ss_pred CCeEEEEEe
Q 004217 247 AAPLLLTAE 255 (767)
Q Consensus 247 G~~LlaSgs 255 (767)
|++|.++..
T Consensus 332 GrfLYVSnr 340 (462)
T 2ece_A 332 DKFLYLSLW 340 (462)
T ss_dssp SCEEEEEET
T ss_pred CCEEEEEeC
Confidence 999888764
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.33 E-value=9.5e-06 Score=84.64 Aligned_cols=174 Identities=10% Similarity=0.039 Sum_probs=112.2
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCCCC---C----C-CCCCeEEEEECCCCCeEEE----EeC------------
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYCPL---S----P-PPRSTIAAAFSPDGKTLAS----THG------------ 127 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~L---~----g-H~~sVtsVaFSpDG~~LAS----gs~------------ 127 (767)
...++...+++.+++...++.|.+|+.+ +++ . + ....+.+++++++|+++++ |..
T Consensus 88 ~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~ 166 (305)
T 3dr2_A 88 TNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPEL 166 (305)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSS
T ss_pred cceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccccccc
Confidence 3445555566655444455788888875 321 1 1 1234678999999998886 332
Q ss_pred -CCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCC------CeEEEEECCCCeEEE--eec--CCCCeEE
Q 004217 128 -DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLD------HEVRLWNASTAECIG--SRD--FYRPIAS 196 (767)
Q Consensus 128 -DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~D------GtVrIWDl~tg~~i~--~l~--h~~~Vts 196 (767)
.+.|..||.++++..... .......++|+| +++.|+.+..+ +.|.+||+..+.... .+. .......
T Consensus 167 ~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg 243 (305)
T 3dr2_A 167 AHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDG 243 (305)
T ss_dssp SCEEEEEECSSSCCCEEEE--EESSEEEEEECT-TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCS
T ss_pred CCCeEEEEcCCCCcEEEEe--cCCCCcceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCe
Confidence 256888888777654433 345578899999 77766665554 789999987654211 111 2344567
Q ss_pred EEEcCCCCEEEEEECCcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 197 IAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 197 VafSPdG~~LAsgSdd~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
++++++|++.++ ..++|.+||.. ++... .+..+ ..+.+++|+++++.|.+++.
T Consensus 244 i~~d~~G~lwv~-~~~gv~~~~~~-g~~~~---~~~~~-~~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 244 FCVDRGGWLWSS-SGTGVCVFDSD-GQLLG---HIPTP-GTASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp EEECTTSCEEEC-CSSEEEEECTT-SCEEE---EEECS-SCCCEEEECTTSCEEEEEET
T ss_pred EEECCCCCEEEe-cCCcEEEECCC-CCEEE---EEECC-CceeEEEEeCCCCEEEEEcC
Confidence 899999995544 46679999984 33322 22222 36889999999987777653
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.32 E-value=1.7e-05 Score=84.46 Aligned_cols=181 Identities=8% Similarity=-0.069 Sum_probs=113.4
Q ss_pred eEEEEEEcCCCEEEEEeC-----CCeEEEEeCCCCCC------C----CCCCCeEEEEECCCCCeE-EEEe---CCCeEE
Q 004217 72 QIFEAGRDARRGLASWVE-----AESLHHLRPKYCPL------S----PPPRSTIAAAFSPDGKTL-ASTH---GDHTVK 132 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~-----DgsIrlWd~~t~~L------~----gH~~sVtsVaFSpDG~~L-ASgs---~DGtVr 132 (767)
+.-+++..+++..+.-.. +..|.+||.+++++ . .+...+..+++++++..+ ++-. .++.|.
T Consensus 69 p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~ 148 (343)
T 2qe8_A 69 VLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALI 148 (343)
T ss_dssp EEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEE
T ss_pred eeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEE
Confidence 555666555543333222 47899999877641 1 233457899999865454 5544 678999
Q ss_pred EEECCCCeEEEEEccCC-----------------------------CCcEEEEEccCCCcEEEEEeCCC-eEEEEECC--
Q 004217 133 IIDCQTGSCLKVLHGHR-----------------------------RTPWVVRFHPLNPTIIASGSLDH-EVRLWNAS-- 180 (767)
Q Consensus 133 VWDl~tg~~l~~L~gH~-----------------------------~~V~sLafsP~dg~lLaSgS~DG-tVrIWDl~-- 180 (767)
+||+.+++..+.+.+|. ..+..|+|+| +++.|+.+..++ .+..++..
T Consensus 149 v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~~l~~~~~~~~ 227 (343)
T 2qe8_A 149 RVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHSTSMYRIKSADL 227 (343)
T ss_dssp EEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCSEEEEEEHHHH
T ss_pred EEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCCeEEEEEHHHh
Confidence 99999888776665431 1357899999 787777776665 44444421
Q ss_pred -CCeE--------EEeecCCCCeEEEEEcCCCCEEEEEEC-CcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeE
Q 004217 181 -TAEC--------IGSRDFYRPIASIAFHASGELLAVASG-HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPL 250 (767)
Q Consensus 181 -tg~~--------i~~l~h~~~VtsVafSPdG~~LAsgSd-d~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~L 250 (767)
.+.. +....+......++++++|+++++... +.|.+||..+++... .....+...+.+++|.++++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~--~~~~~~~~~p~~va~~~~g~l~ 305 (343)
T 2qe8_A 228 SNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKL--LVTDEKLSWTDSFNFGSDGYLY 305 (343)
T ss_dssp TCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEE--EEECGGGSCEEEEEECTTSCEE
T ss_pred cCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEE--EEECCceecCCeeEECCCCcEE
Confidence 1110 111223345667999999987777764 459999985554211 1111224568999999998866
Q ss_pred EEEEe
Q 004217 251 LLTAE 255 (767)
Q Consensus 251 laSgs 255 (767)
+++..
T Consensus 306 v~~~~ 310 (343)
T 2qe8_A 306 FDCNQ 310 (343)
T ss_dssp EEECC
T ss_pred EEeCc
Confidence 65554
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.32 E-value=2.2e-05 Score=92.18 Aligned_cols=174 Identities=11% Similarity=0.061 Sum_probs=117.0
Q ss_pred EEEEcCCCEEEEEeCCC-------------eEEEEeCCCCC--------CCC-CCCCeEEEEECCCCCeEEEEeC----C
Q 004217 75 EAGRDARRGLASWVEAE-------------SLHHLRPKYCP--------LSP-PPRSTIAAAFSPDGKTLASTHG----D 128 (767)
Q Consensus 75 vA~sd~g~~LaSgs~Dg-------------sIrlWd~~t~~--------L~g-H~~sVtsVaFSpDG~~LASgs~----D 128 (767)
++++ +++.|+..+.+. .|++|++.+.+ ... |...+..+.|||||++|+.... +
T Consensus 180 ~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 258 (693)
T 3iuj_A 180 ISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSG 258 (693)
T ss_dssp CEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSC
T ss_pred EEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCC
Confidence 3455 777777777663 49999987652 123 4456789999999998865443 3
Q ss_pred CeEEEEECCCCe-EEEEEccCCCCcEEEEEccCCCcEEEEEeCC---CeEEEEECCCCeE---EEeecCCCCeEEEEEcC
Q 004217 129 HTVKIIDCQTGS-CLKVLHGHRRTPWVVRFHPLNPTIIASGSLD---HEVRLWNASTAEC---IGSRDFYRPIASIAFHA 201 (767)
Q Consensus 129 GtVrVWDl~tg~-~l~~L~gH~~~V~sLafsP~dg~lLaSgS~D---GtVrIWDl~tg~~---i~~l~h~~~VtsVafSP 201 (767)
..|++||+.++. ....+..+....... |++.++.+++....| +.|..||+.++.. .....+...+. .|++
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~ 335 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHS 335 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEE
T ss_pred cEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEE
Confidence 589999998763 455666676666665 566356666666554 6799999988754 33345555554 8999
Q ss_pred CCCEEEEEE-CC---cEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 202 SGELLAVAS-GH---KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 202 dG~~LAsgS-dd---~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
++++|+... ++ .|++||+..+.... ........+..+.++++++.++.+..
T Consensus 336 ~g~~lv~~~~~~g~~~l~~~d~~g~~~~~---l~~p~~~~~~~~~~~~d~~~l~~~~s 390 (693)
T 3iuj_A 336 GSGYLFAEYMVDATARVEQFDYEGKRVRE---VALPGLGSVSGFNGKHDDPALYFGFE 390 (693)
T ss_dssp ETTEEEEEEEETTEEEEEEECTTSCEEEE---ECCSSSSEEEECCCCTTCSCEEEEEE
T ss_pred ECCEEEEEEEECCeeEEEEEECCCCeeEE---eecCCCceEEeeecCCCCCEEEEEec
Confidence 999887766 33 39999987543211 22234456778888999887776643
No 221
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.24 E-value=2.7e-05 Score=81.72 Aligned_cols=172 Identities=9% Similarity=0.009 Sum_probs=117.9
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCCCCC--CCCeE--EEEECCCCCeE-EEEeCCCeEEEEECCCCeEEEEEccCCCCcEE
Q 004217 80 ARRGLASWVEAESLHHLRPKYCPLSPP--PRSTI--AAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (767)
Q Consensus 80 ~g~~LaSgs~DgsIrlWd~~t~~L~gH--~~sVt--sVaFSpDG~~L-ASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~s 154 (767)
++...++.+.++.|+.+|++++++... ..... .+++. ++.| +....++.+.+||.++.+.+.++..- ..-+.
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwG 140 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWG 140 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCC
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeE
Confidence 456666777888899999998854321 22232 35554 4444 44556899999999999999998743 33355
Q ss_pred EEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecC---C---CCeEEEEEcCCCCEEEEEE-CCcEEEEEcCCCccccC
Q 004217 155 VRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF---Y---RPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSS 227 (767)
Q Consensus 155 LafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h---~---~~VtsVafSPdG~~LAsgS-dd~V~VWDl~t~~~~~~ 227 (767)
+++ +++.|+.+..+++|.++|..+.+.+..+.- . ..++.+.|. +|++.+... .+.|.+.|.++++.+..
T Consensus 141 Lt~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~ 216 (268)
T 3nok_A 141 LCY---WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGV 216 (268)
T ss_dssp EEE---ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEE
T ss_pred Eec---CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEE
Confidence 554 456666666799999999999998887542 1 245677877 776444332 45599999999986541
Q ss_pred CeEE----------ecCCCCeEEEEEccCCCeEEEEEeeCC
Q 004217 228 PRIV----------LRTRRSLRAVHFHPHAAPLLLTAEVND 258 (767)
Q Consensus 228 ~~~l----------~~h~~~VtsVaFSPDG~~LlaSgsvwd 258 (767)
...- ..-.+-.+.|+|+|+++.|++|++.|.
T Consensus 217 Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp 257 (268)
T 3nok_A 217 IDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWP 257 (268)
T ss_dssp EECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCS
T ss_pred EECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCC
Confidence 1110 011245789999999999999999885
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.24 E-value=6.7e-05 Score=83.85 Aligned_cols=97 Identities=10% Similarity=0.010 Sum_probs=74.7
Q ss_pred CeEEEEeCCCCCCC----CCCCCeEEEEECCCCCeEEEEe----------CCCeEEEEECCCCeEEEEEccC-------C
Q 004217 91 ESLHHLRPKYCPLS----PPPRSTIAAAFSPDGKTLASTH----------GDHTVKIIDCQTGSCLKVLHGH-------R 149 (767)
Q Consensus 91 gsIrlWd~~t~~L~----gH~~sVtsVaFSpDG~~LASgs----------~DGtVrVWDl~tg~~l~~L~gH-------~ 149 (767)
+.|.++|..+.++. .-..+ .++++|||++|+.+. .++.|.++|..+++.+..+.-. .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 68999999887422 11233 899999999998876 3678999999999988877421 2
Q ss_pred CCcEEEEEccCCCcEEEEEeC--CCeEEEEECCCCeEEEeecC
Q 004217 150 RTPWVVRFHPLNPTIIASGSL--DHEVRLWNASTAECIGSRDF 190 (767)
Q Consensus 150 ~~V~sLafsP~dg~lLaSgS~--DGtVrIWDl~tg~~i~~l~h 190 (767)
.....+.|+| ++++++.+.. +++|.+.|+.+++.+..+..
T Consensus 177 ~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 177 TYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp CCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 3466789999 8887777663 68999999999998877653
No 223
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.24 E-value=7.6e-05 Score=82.39 Aligned_cols=138 Identities=10% Similarity=0.012 Sum_probs=94.8
Q ss_pred cCCCEEEEEeC-----CCeEEEEeCCCCCCC----CCCCCeEEEEECCCCCeEEEEe----------CCCeEEEEECCCC
Q 004217 79 DARRGLASWVE-----AESLHHLRPKYCPLS----PPPRSTIAAAFSPDGKTLASTH----------GDHTVKIIDCQTG 139 (767)
Q Consensus 79 d~g~~LaSgs~-----DgsIrlWd~~t~~L~----gH~~sVtsVaFSpDG~~LASgs----------~DGtVrVWDl~tg 139 (767)
.++..++.... ++.|.+.|..+.++. .-..+ . +++||||++|+++. .++.|.+||..++
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 45666665544 578999998876422 12223 4 99999999998775 3678999999999
Q ss_pred eEEEEEccC-------CCCcEEEEEccCCCcEEEEEeC--CCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEE
Q 004217 140 SCLKVLHGH-------RRTPWVVRFHPLNPTIIASGSL--DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVAS 210 (767)
Q Consensus 140 ~~l~~L~gH-------~~~V~sLafsP~dg~lLaSgS~--DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgS 210 (767)
+.+..+.-. ......+.|+| ++++++.+.. +++|.++|+.+++.+..+...+. ...+....+.+++.+
T Consensus 120 ~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~ 196 (386)
T 3sjl_D 120 LPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFFMHC 196 (386)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEE
T ss_pred eEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeEEEC
Confidence 988877432 12567799999 7887777653 68999999999999988764432 122322233443433
Q ss_pred -CCcEEEEEcCC
Q 004217 211 -GHKLYIWRYNM 221 (767)
Q Consensus 211 -dd~V~VWDl~t 221 (767)
++++.+.++..
T Consensus 197 ~DG~~~~v~~~~ 208 (386)
T 3sjl_D 197 RDGSLAKVAFGT 208 (386)
T ss_dssp TTSCEEEEECCS
T ss_pred CCCCEEEEECCC
Confidence 45577777765
No 224
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.24 E-value=2.4e-05 Score=82.00 Aligned_cols=175 Identities=9% Similarity=0.031 Sum_probs=113.5
Q ss_pred CCCEEEEEeCCC--eEEEEeCCCCCCCC---CCCCeEEEEECCCCCeEEEE-eCCCeEEEEECCCCeEEEEEccCCCCcE
Q 004217 80 ARRGLASWVEAE--SLHHLRPKYCPLSP---PPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (767)
Q Consensus 80 ~g~~LaSgs~Dg--sIrlWd~~t~~L~g---H~~sVtsVaFSpDG~~LASg-s~DGtVrVWDl~tg~~l~~L~gH~~~V~ 153 (767)
++....+.+.++ .|+.+|++++++.. -..........++++.|... ..++.+.+||.++.+.+.++.-.. .-+
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-eG~ 130 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-EGW 130 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CCC
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC-Cce
Confidence 445555555555 89999999885221 11233332233345555554 458899999999999999887432 224
Q ss_pred EEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecC---C---CCeEEEEEcCCCCEEEEEE-CCcEEEEEcCCCcccc
Q 004217 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF---Y---RPIASIAFHASGELLAVAS-GHKLYIWRYNMREETS 226 (767)
Q Consensus 154 sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h---~---~~VtsVafSPdG~~LAsgS-dd~V~VWDl~t~~~~~ 226 (767)
.++ + +++.|+....+++|.++|..+.+.+..+.- . ..++.+.|. +|+..+... ++.|.+.|.++++...
T Consensus 131 glt--~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~ 206 (262)
T 3nol_A 131 GLT--H-NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTG 206 (262)
T ss_dssp CEE--E-CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEE
T ss_pred EEe--c-CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEE
Confidence 454 4 445455545578899999999988877542 1 345567786 676444333 4559999999998654
Q ss_pred CCeE--Ee-------cCCCCeEEEEEccCCCeEEEEEeeCCc
Q 004217 227 SPRI--VL-------RTRRSLRAVHFHPHAAPLLLTAEVNDL 259 (767)
Q Consensus 227 ~~~~--l~-------~h~~~VtsVaFSPDG~~LlaSgsvwdl 259 (767)
.... +. .-....+.|+|+|+++.|+++|+.|.-
T Consensus 207 ~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~ 248 (262)
T 3nol_A 207 IIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPK 248 (262)
T ss_dssp EEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSE
T ss_pred EEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCc
Confidence 1111 00 112356899999999999999998853
No 225
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.21 E-value=1.5e-07 Score=102.26 Aligned_cols=140 Identities=11% Similarity=0.013 Sum_probs=76.8
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCC-cE-
Q 004217 80 ARRGLASWVEAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT-PW- 153 (767)
Q Consensus 80 ~g~~LaSgs~DgsIrlWd~~t~~L----~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~-V~- 153 (767)
.+..++.++.|+.|..||..++++ .. +.+.+..+..+++.+++++.|+.|+.||.++|+.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 577888899999999999988742 22 45555556667888888889999999999999877666543211 10
Q ss_pred EEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECC-cEEEEEcCCCcccc
Q 004217 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETS 226 (767)
Q Consensus 154 sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd-~V~VWDl~t~~~~~ 226 (767)
...+. .+..+++++.|+.|+.||.++|+.+..+..... ..++|++..|++++.+ .|+.||.++++...
T Consensus 86 sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 86 SPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp CSCC-------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred CceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 00111 345677888899999999999999887654332 3456788888887754 59999999988655
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.16 E-value=3.6e-05 Score=86.49 Aligned_cols=182 Identities=10% Similarity=0.002 Sum_probs=117.9
Q ss_pred EEcCCCEEEEEeCC------CeEEEEeCCCCCCC------CCC-CCeEEEEECCCCCeEEEEe-----------------
Q 004217 77 GRDARRGLASWVEA------ESLHHLRPKYCPLS------PPP-RSTIAAAFSPDGKTLASTH----------------- 126 (767)
Q Consensus 77 ~sd~g~~LaSgs~D------gsIrlWd~~t~~L~------gH~-~sVtsVaFSpDG~~LASgs----------------- 126 (767)
...++ .+++...+ +.|.+.|.++.++. ... .--..+-|+|+++.+++..
T Consensus 145 ~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~ 223 (462)
T 2ece_A 145 CGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLK 223 (462)
T ss_dssp ECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHH
T ss_pred ECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhh
Confidence 33455 55555444 67999998876422 122 2234688899999988875
Q ss_pred --CCCeEEEEECCCCeEEEEEccC--CCCcEEEEE--ccCCCcEEEEEe------CCCeEEEEECCCCeEEEe--e--cC
Q 004217 127 --GDHTVKIIDCQTGSCLKVLHGH--RRTPWVVRF--HPLNPTIIASGS------LDHEVRLWNASTAECIGS--R--DF 190 (767)
Q Consensus 127 --~DGtVrVWDl~tg~~l~~L~gH--~~~V~sLaf--sP~dg~lLaSgS------~DGtVrIWDl~tg~~i~~--l--~h 190 (767)
.+.+|.+||+.+++.+.++.-- ......+.| +| ++++++.++ .+++|.+|....++.... + ..
T Consensus 224 ~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~ 302 (462)
T 2ece_A 224 DRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPA 302 (462)
T ss_dssp HHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECC
T ss_pred hccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCC
Confidence 3689999999999888877642 123456666 99 666665555 677888876655432111 1 10
Q ss_pred -----------------CCCeEEEEEcCCCCEEEEEEC--CcEEEEEcCCCccccCCeEE-ecCC-------------CC
Q 004217 191 -----------------YRPIASIAFHASGELLAVASG--HKLYIWRYNMREETSSPRIV-LRTR-------------RS 237 (767)
Q Consensus 191 -----------------~~~VtsVafSPdG~~LAsgSd--d~V~VWDl~t~~~~~~~~~l-~~h~-------------~~ 237 (767)
......|.+++||++|.++.. +.|.+||+...........+ .+.. ..
T Consensus 303 ~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~gg 382 (462)
T 2ece_A 303 EPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGA 382 (462)
T ss_dssp EECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSC
T ss_pred ccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCC
Confidence 245778999999999999984 44999998633221111111 1100 13
Q ss_pred eEEEEEccCCCeEEEEEe---eCCcC
Q 004217 238 LRAVHFHPHAAPLLLTAE---VNDLD 260 (767)
Q Consensus 238 VtsVaFSPDG~~LlaSgs---vwdl~ 260 (767)
-..++++|||++|+++.+ -||-.
T Consensus 383 Pr~~~lSpDGk~LyVaNsl~~~wd~Q 408 (462)
T 2ece_A 383 PQMLEISRDGRRVYVTNSLYSTWDNQ 408 (462)
T ss_dssp CCCEEECTTSSEEEEECCCCHHHHHH
T ss_pred CCEEEEcCCCCEEEEEcCCccccccc
Confidence 588999999999998875 55544
No 227
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.15 E-value=9.9e-05 Score=77.52 Aligned_cols=174 Identities=10% Similarity=0.014 Sum_probs=113.4
Q ss_pred EEcCCCEEEEEeC---CCeEEEEeCCCCCCC-----CCCCCeEEEEECCCCCeEEEE-eCCCeEEEEECCCCeEEEEEcc
Q 004217 77 GRDARRGLASWVE---AESLHHLRPKYCPLS-----PPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 77 ~sd~g~~LaSgs~---DgsIrlWd~~t~~L~-----gH~~sVtsVaFSpDG~~LASg-s~DGtVrVWDl~tg~~l~~L~g 147 (767)
+..++ .|+..+. ++.|+++|..++++. +.......+++. ++.|+.+ -.++.|.++|..+++.+.++..
T Consensus 28 ~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~ 104 (266)
T 2iwa_A 28 YAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTH 104 (266)
T ss_dssp ECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEEC
T ss_pred EeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEEC
Confidence 33444 5555442 578999999987422 111222345554 5555544 4578999999999999988853
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCC------CCeEEEEEcCCCCEEEEEE-CCcEEEEEcC
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY------RPIASIAFHASGELLAVAS-GHKLYIWRYN 220 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~------~~VtsVafSPdG~~LAsgS-dd~V~VWDl~ 220 (767)
-...-+. +++ +++.++.+..+++|.++|..+.+.+..+.-. ...+.+.|. +|+..+... ++.|.+.|..
T Consensus 105 g~~~g~g--lt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~ 180 (266)
T 2iwa_A 105 QMKDGWG--LAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAK 180 (266)
T ss_dssp CSSSCCE--EEE-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETT
T ss_pred CCCCeEE--EEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECC
Confidence 2122233 455 4444444557899999999998888775421 246788888 675443332 4559999999
Q ss_pred CCccccCCeEEecC-----------CCCeEEEEEccCCCeEEEEEeeCC
Q 004217 221 MREETSSPRIVLRT-----------RRSLRAVHFHPHAAPLLLTAEVND 258 (767)
Q Consensus 221 t~~~~~~~~~l~~h-----------~~~VtsVaFSPDG~~LlaSgsvwd 258 (767)
+++.+.... +.+. ....+.|+|+|+++.++++++.|+
T Consensus 181 tg~V~~~I~-~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 181 DGTLLGWIL-LPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp TCCEEEEEE-CHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred CCcEEEEEE-CCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 998755111 1110 135689999999999999998774
No 228
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.12 E-value=0.00016 Score=74.98 Aligned_cols=173 Identities=14% Similarity=0.093 Sum_probs=111.9
Q ss_pred CCEEEEEeCC--CeEEEEeCCCCCCCC---CCCCeEEEEECCCCCeE-EEEeCCCeEEEEECCCCeEEEEEccCCCCcEE
Q 004217 81 RRGLASWVEA--ESLHHLRPKYCPLSP---PPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (767)
Q Consensus 81 g~~LaSgs~D--gsIrlWd~~t~~L~g---H~~sVtsVaFSpDG~~L-ASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~s 154 (767)
+....+...+ ..|+.+|++++++.. -...........+++.| .....++.+.+||.++.+.+.++.... .-+.
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gwg 109 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGWA 109 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCCE
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-CceE
Confidence 4444444443 489999999885321 11222222222234455 444568999999999999999987433 3355
Q ss_pred EEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCC------CCeEEEEEcCCCCEEEEEE-CCcEEEEEcCCCccccC
Q 004217 155 VRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFY------RPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSS 227 (767)
Q Consensus 155 LafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~------~~VtsVafSPdG~~LAsgS-dd~V~VWDl~t~~~~~~ 227 (767)
+++ ++..|+.+..+++|.++|..+.+.+..+.-. ..++.+.|. +|+..+... .+.|.+.|.++++.+..
T Consensus 110 lt~---dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~ 185 (243)
T 3mbr_X 110 LTS---DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAW 185 (243)
T ss_dssp EEE---CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEE
T ss_pred Eee---CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEE
Confidence 654 3444444456889999999999888776421 345667776 666554442 45699999999986541
Q ss_pred CeE--E--------ecCCCCeEEEEEccCCCeEEEEEeeCC
Q 004217 228 PRI--V--------LRTRRSLRAVHFHPHAAPLLLTAEVND 258 (767)
Q Consensus 228 ~~~--l--------~~h~~~VtsVaFSPDG~~LlaSgsvwd 258 (767)
... + ....+-.+.|+++|+++.|++|++.|.
T Consensus 186 idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp 226 (243)
T 3mbr_X 186 IDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWP 226 (243)
T ss_dssp EECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCS
T ss_pred EECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCC
Confidence 110 0 011235689999999999999999885
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.08 E-value=7e-05 Score=88.15 Aligned_cols=160 Identities=13% Similarity=0.146 Sum_probs=110.0
Q ss_pred eEEEEeCCCCCC------CCC-------CCCeEEEEECCCC---CeEEEEeCCCeEEEEECCCCeEEEEEccCCCC----
Q 004217 92 SLHHLRPKYCPL------SPP-------PRSTIAAAFSPDG---KTLASTHGDHTVKIIDCQTGSCLKVLHGHRRT---- 151 (767)
Q Consensus 92 sIrlWd~~t~~L------~gH-------~~sVtsVaFSpDG---~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~---- 151 (767)
.|..+|.+++++ ..| ......+....|| +.|+.++.+|.|+++|.++|+.+..+......
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 488888887742 223 1223334444578 68899999999999999999988766422100
Q ss_pred -------c------------------------EEEEEccCCCcEEEEEeC------------------------------
Q 004217 152 -------P------------------------WVVRFHPLNPTIIASGSL------------------------------ 170 (767)
Q Consensus 152 -------V------------------------~sLafsP~dg~lLaSgS~------------------------------ 170 (767)
+ ..++|+| +..+++....
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 442 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP-QTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT 442 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET-TTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC-CCCEEEEeChhcceeeeccccccccccccccccccccccc
Confidence 0 1467888 6666666432
Q ss_pred -------------CCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECC-cEEEEEcCCCccccCCeEEecCCC
Q 004217 171 -------------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH-KLYIWRYNMREETSSPRIVLRTRR 236 (767)
Q Consensus 171 -------------DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd-~V~VWDl~t~~~~~~~~~l~~h~~ 236 (767)
.+.|..||+.+++.+..+.+...+....+..++.++++++.+ .+++||.++++.+. ....++..
T Consensus 443 g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw--~~~~~~~~ 520 (677)
T 1kb0_A 443 AKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW--EAPTGTGV 520 (677)
T ss_dssp CEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE--EEECSSCC
T ss_pred ccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceee--eeeCCCCc
Confidence 278999999999999888766666666677788888888754 49999999999866 22223333
Q ss_pred CeEEEEEccCCCeEEEEE
Q 004217 237 SLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 237 ~VtsVaFSPDG~~LlaSg 254 (767)
.-.-+.|..+|+.+++..
T Consensus 521 ~~~p~~y~~~G~~~v~~~ 538 (677)
T 1kb0_A 521 VAAPSTYMVDGRQYVSVA 538 (677)
T ss_dssp CSCCEEEEETTEEEEEEE
T ss_pred ccCCEEEEeCCEEEEEEe
Confidence 334566778998666543
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.02 E-value=0.00016 Score=85.30 Aligned_cols=178 Identities=13% Similarity=0.091 Sum_probs=117.4
Q ss_pred EEEEcCCCEEEEEeCCC-------------------eEEEEeCCCCCC------CCCC-------CCeEEEEECCCCC--
Q 004217 75 EAGRDARRGLASWVEAE-------------------SLHHLRPKYCPL------SPPP-------RSTIAAAFSPDGK-- 120 (767)
Q Consensus 75 vA~sd~g~~LaSgs~Dg-------------------sIrlWd~~t~~L------~gH~-------~sVtsVaFSpDG~-- 120 (767)
.+.......++.+..++ .|..||.+++++ ..|. ..+.......+|+
T Consensus 240 ~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~ 319 (689)
T 1yiq_A 240 FAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPR 319 (689)
T ss_dssp EEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEE
T ss_pred eeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEE
Confidence 34455667777776665 388889888742 2221 2222223333665
Q ss_pred -eEEEEeCCCeEEEEECCCCeEEEEEccCC-C--------------------------------------CcEEEEEccC
Q 004217 121 -TLASTHGDHTVKIIDCQTGSCLKVLHGHR-R--------------------------------------TPWVVRFHPL 160 (767)
Q Consensus 121 -~LASgs~DGtVrVWDl~tg~~l~~L~gH~-~--------------------------------------~V~sLafsP~ 160 (767)
.|+.++.+|.++++|.++|+.+....... . .-..++|+|
T Consensus 320 ~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp- 398 (689)
T 1yiq_A 320 KVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP- 398 (689)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET-
T ss_pred EEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC-
Confidence 78899999999999999999874432111 0 011267888
Q ss_pred CCcEEEEEeC---------------------------------------------CCeEEEEECCCCeEEEeecCCCCeE
Q 004217 161 NPTIIASGSL---------------------------------------------DHEVRLWNASTAECIGSRDFYRPIA 195 (767)
Q Consensus 161 dg~lLaSgS~---------------------------------------------DGtVrIWDl~tg~~i~~l~h~~~Vt 195 (767)
+..+++.... +|+|+.||+.+++.+..+.+...+.
T Consensus 399 ~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~ 478 (689)
T 1yiq_A 399 DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFN 478 (689)
T ss_dssp TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCC
T ss_pred CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCcc
Confidence 5566665421 4789999999999998877655555
Q ss_pred EEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 196 SIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 196 sVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
...+...+.+++.++.++ |+.||.++++.+. ....++...-.-+.|..||+.+++...
T Consensus 479 ~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw--~~~~~~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 479 GGTLSTAGNLVFEGSADGRVIAYAADTGEKLW--EQPAASGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTCCEEE--EEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CccceECCCEEEEECCCCcEEEEECCCCccce--eeeCCCCcccCceEEEECCEEEEEEEe
Confidence 556677788888888555 9999999999866 122233333345777889986665543
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.99 E-value=0.00024 Score=82.22 Aligned_cols=179 Identities=8% Similarity=-0.062 Sum_probs=125.4
Q ss_pred CCCEEEEEe-CCCeEEEEeCCCCCCC-----CCCCCeEEEEE-C-CCCCeEEEEe------------------CCCeEEE
Q 004217 80 ARRGLASWV-EAESLHHLRPKYCPLS-----PPPRSTIAAAF-S-PDGKTLASTH------------------GDHTVKI 133 (767)
Q Consensus 80 ~g~~LaSgs-~DgsIrlWd~~t~~L~-----gH~~sVtsVaF-S-pDG~~LASgs------------------~DGtVrV 133 (767)
+|++++... .+..|.+.|+.+.+.. ........+++ + |+++++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 456666554 4556999999886421 23356889998 5 8999998884 2568999
Q ss_pred EECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCC--------------------------------------eEE
Q 004217 134 IDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDH--------------------------------------EVR 175 (767)
Q Consensus 134 WDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DG--------------------------------------tVr 175 (767)
+|.++.+.+.++.--. ....++++| +++++++.+.+. .|.
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 9999999888876333 456788999 788888877553 477
Q ss_pred EEECCC--CeE-EEeecCCCCeEEEEEcCCCCEEEEEE--CCcEEEEEcCCCccc--------cCCeEEecCCCCeEEEE
Q 004217 176 LWNAST--AEC-IGSRDFYRPIASIAFHASGELLAVAS--GHKLYIWRYNMREET--------SSPRIVLRTRRSLRAVH 242 (767)
Q Consensus 176 IWDl~t--g~~-i~~l~h~~~VtsVafSPdG~~LAsgS--dd~V~VWDl~t~~~~--------~~~~~l~~h~~~VtsVa 242 (767)
+.|.++ ++. +..+.......++.++|||+++++++ ++.|.++|+.+.+.. ........-......++
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~a 337 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTA 337 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEE
T ss_pred EEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEE
Confidence 778877 444 45555455667899999999999887 455999999865310 00111223345688999
Q ss_pred EccCCCeEEEEEe------eCCcCC
Q 004217 243 FHPHAAPLLLTAE------VNDLDS 261 (767)
Q Consensus 243 FSPDG~~LlaSgs------vwdl~s 261 (767)
|+||| ++.++.. .|+++.
T Consensus 338 F~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 338 FDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp ECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred ECCCC-eEEEEEecCCcEEEEEhhH
Confidence 99999 6666543 666653
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.95 E-value=8.7e-05 Score=81.33 Aligned_cols=86 Identities=12% Similarity=-0.099 Sum_probs=64.1
Q ss_pred eEEEEeCCCCCCC----CCCCCeEEEEECCCCCeEEEEe----------CCCeEEEEECCCCeEEEEEccC-------CC
Q 004217 92 SLHHLRPKYCPLS----PPPRSTIAAAFSPDGKTLASTH----------GDHTVKIIDCQTGSCLKVLHGH-------RR 150 (767)
Q Consensus 92 sIrlWd~~t~~L~----gH~~sVtsVaFSpDG~~LASgs----------~DGtVrVWDl~tg~~l~~L~gH-------~~ 150 (767)
.|.++|..+.+.. .-..+ .+.|+||+++|+++. .++.|.+||..+++.+.++... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 7778888776422 11234 799999999999886 3689999999999999888643 13
Q ss_pred CcEEEEEccCCCcEEEEEeC--CCeEEE--EECC
Q 004217 151 TPWVVRFHPLNPTIIASGSL--DHEVRL--WNAS 180 (767)
Q Consensus 151 ~V~sLafsP~dg~lLaSgS~--DGtVrI--WDl~ 180 (767)
....+.|+| ++++++.+.. +..|.+ +|+.
T Consensus 125 ~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 125 RVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp CTTSEEECT-TSSCEEEEECSSSCEEEEEETTTE
T ss_pred CcceEEEcC-CCCEEEEEccCCCCeEEEEEEchh
Confidence 466899999 7777777654 466888 8774
No 233
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.91 E-value=0.00077 Score=70.63 Aligned_cols=176 Identities=8% Similarity=0.054 Sum_probs=108.4
Q ss_pred EEEEcCCCEEEEEeCCCeEEEEeCCCCCCCC-----------------------CCCCeEEEEECC-CCCeEEEEeCCCe
Q 004217 75 EAGRDARRGLASWVEAESLHHLRPKYCPLSP-----------------------PPRSTIAAAFSP-DGKTLASTHGDHT 130 (767)
Q Consensus 75 vA~sd~g~~LaSgs~DgsIrlWd~~t~~L~g-----------------------H~~sVtsVaFSp-DG~~LASgs~DGt 130 (767)
++...++..+++...++.|..|+...+.+.. ....+..+++.+ +|+ |+.+...+.
T Consensus 24 i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~~~~ 102 (322)
T 2fp8_A 24 FTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDCYYH 102 (322)
T ss_dssp EECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEETTTE
T ss_pred EEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEECCCC
Confidence 3344455557777777888888776543210 013578999998 555 555555556
Q ss_pred EEEEECCCCeEEEEEcc-----CCCCcEEEEEccCCCcEEEEEeC-----------------CCeEEEEECCCCeEEEee
Q 004217 131 VKIIDCQTGSCLKVLHG-----HRRTPWVVRFHPLNPTIIASGSL-----------------DHEVRLWNASTAECIGSR 188 (767)
Q Consensus 131 VrVWDl~tg~~l~~L~g-----H~~~V~sLafsP~dg~lLaSgS~-----------------DGtVrIWDl~tg~~i~~l 188 (767)
|.++|..+++. ..+.. .......+++.+.+++++++-.. ++.|..||..+++.....
T Consensus 103 i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 181 (322)
T 2fp8_A 103 LSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL 181 (322)
T ss_dssp EEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec
Confidence 88899776542 22211 11346789998834566666432 367899998877654433
Q ss_pred cCCCCeEEEEEcCCCCEEEEEE--CCcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 189 DFYRPIASIAFHASGELLAVAS--GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 189 ~h~~~VtsVafSPdG~~LAsgS--dd~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
........++|+|+|++|.++. .++|.+||+....... ...+..... ...++++++|+.+++..
T Consensus 182 ~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~-~~~~~~~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 182 KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGT-AEVLVKIPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTC-EEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCc-cceEEeCCC-CCCeEECCCCCEEEEec
Confidence 3223456799999999777665 3559999987532111 111111223 78899999998555543
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.86 E-value=0.0011 Score=67.42 Aligned_cols=161 Identities=12% Similarity=0.044 Sum_probs=103.7
Q ss_pred CeEEEEeCCCCCCC---------CCCCCeEEEEECCCCCeEEEE-eCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccC
Q 004217 91 ESLHHLRPKYCPLS---------PPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPL 160 (767)
Q Consensus 91 gsIrlWd~~t~~L~---------gH~~sVtsVaFSpDG~~LASg-s~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~ 160 (767)
+.|+.+++...... .....+..++|+++++.|+.+ ..++.|.++|..++.....+.........+++++.
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~ 89 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHL 89 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETT
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEec
Confidence 46777776544221 012346789999976655544 45789999999866544444333356889999984
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeEEEeecC-CCCeEEEEEcCCCCEEEEEEC----CcEEEEEcCCCccccCCeEEecCC
Q 004217 161 NPTIIASGSLDHEVRLWNASTAECIGSRDF-YRPIASIAFHASGELLAVASG----HKLYIWRYNMREETSSPRIVLRTR 235 (767)
Q Consensus 161 dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h-~~~VtsVafSPdG~~LAsgSd----d~V~VWDl~t~~~~~~~~~l~~h~ 235 (767)
++.++++-...+.|.++|+........... ......++++|++..|..+.. +.|..+++....... ......
T Consensus 90 ~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~---~~~~~~ 166 (267)
T 1npe_A 90 GRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRI---LAQDNL 166 (267)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEE---EECTTC
T ss_pred CCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEE---EEECCC
Confidence 566777777788999999875433222322 256789999997666655552 348888876433211 111233
Q ss_pred CCeEEEEEccCCCeEEEEE
Q 004217 236 RSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 236 ~~VtsVaFSPDG~~LlaSg 254 (767)
.....++|++++.+|.++.
T Consensus 167 ~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp SCEEEEEEETTTTEEEEEE
T ss_pred CCCcEEEEcCCCCEEEEEE
Confidence 4678999999988777664
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.74 E-value=1.4e-05 Score=86.71 Aligned_cols=127 Identities=16% Similarity=0.102 Sum_probs=65.3
Q ss_pred CCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCC--CeE
Q 004217 118 DGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYR--PIA 195 (767)
Q Consensus 118 DG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~--~Vt 195 (767)
++..|++++.|+.|+.||..+|+.+..+.. +.+.+..+.. ++.++++++.|+.|+.||..+++.+..+.... .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 678999999999999999999999988876 5555555556 66778888899999999999988766543221 010
Q ss_pred -EEEEcCCCCEEEEEE-CCcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 196 -SIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 196 -sVafSPdG~~LAsgS-dd~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
+..+. ++..|++++ ++.|+.||.++++... .+..+. .+.++|++..+++++.
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w---~~~~~~----~~~~~p~~~~v~~~~~ 138 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQ---TLSSAF----ADSLSPSTSLLYLGRT 138 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC-----------------------------EEEEEE
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEE---EecCCC----cccccccCCEEEEEec
Confidence 11111 234555555 4559999999998765 222222 2456677776666543
No 236
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.74 E-value=0.00019 Score=80.29 Aligned_cols=132 Identities=11% Similarity=-0.018 Sum_probs=95.2
Q ss_pred CCCCeEEEEeCC-----CeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEe----------CCCeEEEEECCC
Q 004217 117 PDGKTLASTHGD-----HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS----------LDHEVRLWNAST 181 (767)
Q Consensus 117 pDG~~LASgs~D-----GtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS----------~DGtVrIWDl~t 181 (767)
++++++++.... +.|.++|..+++.+.++..-..+ .+.++| ++++++.+. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~Sp-Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAE-DGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECC-CCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 477877766553 69999999999999888754444 899999 666665554 477999999999
Q ss_pred CeEEEeecCC--------CCeEEEEEcCCCCEEEEEEC---CcEEEEEcCCCccccCCeEEecCC-------CCeEEEEE
Q 004217 182 AECIGSRDFY--------RPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTR-------RSLRAVHF 243 (767)
Q Consensus 182 g~~i~~l~h~--------~~VtsVafSPdG~~LAsgSd---d~V~VWDl~t~~~~~~~~~l~~h~-------~~VtsVaF 243 (767)
.+.+..+... .....++|+|||++|+++.. +.|.+.|+.+.+.+. .+.-.. ..-.-+.+
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~---~I~v~g~~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDR---MLDVPDCYHIFPASPTVFYMN 235 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEE---EEECCSEEEEEEEETTEEEEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEE---EEEcCCceeeccCCCcEEEEE
Confidence 9988876432 34567899999999998873 349999999988654 121100 11223667
Q ss_pred ccCCCeEEEEE
Q 004217 244 HPHAAPLLLTA 254 (767)
Q Consensus 244 SPDG~~LlaSg 254 (767)
++||+.+++..
T Consensus 236 ~~dG~~~~V~~ 246 (426)
T 3c75_H 236 CRDGSLARVDF 246 (426)
T ss_dssp ETTSSEEEEEC
T ss_pred cCCCCEEEEEC
Confidence 88888665554
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.64 E-value=0.00057 Score=70.44 Aligned_cols=159 Identities=12% Similarity=0.012 Sum_probs=107.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEEEE
Q 004217 81 RRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVR 156 (767)
Q Consensus 81 g~~LaSgs~DgsIrlWd~~t~~----L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLa 156 (767)
+..|+.++.++.|..+|.. ++ ...+...+.++...+++. |..++.++.|..+|.. ++.+..+......+.++.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 183 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAAS 183 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCE
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeE
Confidence 6677888888999999987 42 223344566677777776 5567788999999998 887777766666677787
Q ss_pred EccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEECCcEEEEEcCCCccccCCeEEecCC
Q 004217 157 FHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLRTR 235 (767)
Q Consensus 157 fsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t~~~~~~~~~l~~h~ 235 (767)
+.+ ++.+++.. +.|..|| .+++...... ....+.++..+++|.+.+...+++|..+|. +++... ......
T Consensus 184 ~d~-~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~---~~~~~~ 254 (330)
T 3hxj_A 184 IGK-DGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKW---RFKTGK 254 (330)
T ss_dssp ECT-TCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEE---EEECSS
T ss_pred EcC-CCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeE---EeeCCC
Confidence 876 66655543 8899999 7777666654 345678888898887666555677888874 333322 222233
Q ss_pred CCeEEEEEccCCCeEE
Q 004217 236 RSLRAVHFHPHAAPLL 251 (767)
Q Consensus 236 ~~VtsVaFSPDG~~Ll 251 (767)
..+.++.+.+++..++
T Consensus 255 ~~~~~~~~~~~g~l~v 270 (330)
T 3hxj_A 255 RIESSPVIGNTDTIYF 270 (330)
T ss_dssp CCCSCCEECTTSCEEE
T ss_pred CccccceEcCCCeEEE
Confidence 3344566666776443
No 238
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.61 E-value=0.017 Score=60.17 Aligned_cols=173 Identities=12% Similarity=0.102 Sum_probs=100.5
Q ss_pred EEEEcCCCEEEEEeCCCeEEEEeCCCCC--CCCCCCCeEEEEECCCCCeEEEEeCC--CeEEEEECCCCeEEEEEc-cCC
Q 004217 75 EAGRDARRGLASWVEAESLHHLRPKYCP--LSPPPRSTIAAAFSPDGKTLASTHGD--HTVKIIDCQTGSCLKVLH-GHR 149 (767)
Q Consensus 75 vA~sd~g~~LaSgs~DgsIrlWd~~t~~--L~gH~~sVtsVaFSpDG~~LASgs~D--GtVrVWDl~tg~~l~~L~-gH~ 149 (767)
+++..++..+++-..++.|..||..... ..........++++++|+++++.... ..|..+|..+++...... ...
T Consensus 37 ia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~ 116 (306)
T 2p4o_A 37 LASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDA 116 (306)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTC
T ss_pred EEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCc
Confidence 4444455544454466777777765431 11123468899999999976655432 247777878877543322 122
Q ss_pred CCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeE-EE-ee---------cCCCCeEEEEEcCCCCEEEEEEC--CcEEE
Q 004217 150 RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAEC-IG-SR---------DFYRPIASIAFHASGELLAVASG--HKLYI 216 (767)
Q Consensus 150 ~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~-i~-~l---------~h~~~VtsVafSPdG~~LAsgSd--d~V~V 216 (767)
.....++..+ ++..+++-..++.|..+|..+++. +. .. ..-...+.+ ++++++|.++.. +.|.+
T Consensus 117 ~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~ 193 (306)
T 2p4o_A 117 IFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLR 193 (306)
T ss_dssp SCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEE
T ss_pred cccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEE
Confidence 3345566555 556666655688999999876532 21 10 111234555 889988777763 44999
Q ss_pred EEcCCCccccCCeEEecCCCCeEEEEEccCCCeEE
Q 004217 217 WRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLL 251 (767)
Q Consensus 217 WDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~Ll 251 (767)
||+...........+.. ......++++++|+.++
T Consensus 194 ~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~v 227 (306)
T 2p4o_A 194 IPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYG 227 (306)
T ss_dssp EEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEE
T ss_pred EEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEE
Confidence 99875211111112211 23456789999997433
No 239
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.59 E-value=0.00089 Score=78.75 Aligned_cols=78 Identities=10% Similarity=0.130 Sum_probs=59.0
Q ss_pred EEEEECCCCCeEEEEeCCC-------------------eEEEEECCCCeEEEEEcc--CC-------CCcEEEEEccCCC
Q 004217 111 IAAAFSPDGKTLASTHGDH-------------------TVKIIDCQTGSCLKVLHG--HR-------RTPWVVRFHPLNP 162 (767)
Q Consensus 111 tsVaFSpDG~~LASgs~DG-------------------tVrVWDl~tg~~l~~L~g--H~-------~~V~sLafsP~dg 162 (767)
..+++++++.+|+.+..++ .|..+|.++|+.+..++. |. .....+.... ++
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~-dG 324 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI-AG 324 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE-TT
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc-CC
Confidence 3578999999998887664 599999999999887754 21 1223334444 55
Q ss_pred ---cEEEEEeCCCeEEEEECCCCeEEEeec
Q 004217 163 ---TIIASGSLDHEVRLWNASTAECIGSRD 189 (767)
Q Consensus 163 ---~lLaSgS~DGtVrIWDl~tg~~i~~l~ 189 (767)
..++.++.+|.|.++|..+|+.+..+.
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence 689999999999999999999887643
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.57 E-value=0.0096 Score=60.32 Aligned_cols=171 Identities=9% Similarity=-0.011 Sum_probs=108.1
Q ss_pred eEEEEEEcCCCEEE-EEeCCCeEEEEeCCCCC---CC-CCCCCeEEEEECCCCCeEEEEeC---CCeEEEEECCCCeEEE
Q 004217 72 QIFEAGRDARRGLA-SWVEAESLHHLRPKYCP---LS-PPPRSTIAAAFSPDGKTLASTHG---DHTVKIIDCQTGSCLK 143 (767)
Q Consensus 72 ~~~vA~sd~g~~La-Sgs~DgsIrlWd~~t~~---L~-gH~~sVtsVaFSpDG~~LASgs~---DGtVrVWDl~tg~~l~ 143 (767)
+.-+++...++.|+ +-...+.|.+++.+... +. ........++++|++..|+.+.. .+.|.+++++... ..
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~ 159 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RR 159 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CE
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cE
Confidence 55566665444444 44456788888876432 11 12246789999997666655554 3688888876433 23
Q ss_pred EE-ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEEC--CcEEEEEcC
Q 004217 144 VL-HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG--HKLYIWRYN 220 (767)
Q Consensus 144 ~L-~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSd--d~V~VWDl~ 220 (767)
.+ ...-.....++++++++.++++-...+.|..+|..................++.. +..|..+.. +.|.++|..
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCC
Confidence 33 2333467899999944556677777889999999865444333333445667654 455665653 459999998
Q ss_pred CCccccCCeEEecC-CCCeEEEEEccCCC
Q 004217 221 MREETSSPRIVLRT-RRSLRAVHFHPHAA 248 (767)
Q Consensus 221 t~~~~~~~~~l~~h-~~~VtsVaFSPDG~ 248 (767)
+++.+. .+... ......+++.|++.
T Consensus 238 ~g~~~~---~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 238 ISKEMD---TFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEE---EECCSSCCCCCCEEEECSCC
T ss_pred CCCceE---EEccccccccceeeecCccC
Confidence 887644 33222 22467889998876
No 241
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.55 E-value=0.0028 Score=66.45 Aligned_cols=134 Identities=8% Similarity=0.027 Sum_probs=93.6
Q ss_pred CeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEE--EEEccCCCcEEEEEeCCCeEEEEECCCCeEEE
Q 004217 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV--VRFHPLNPTIIASGSLDHEVRLWNASTAECIG 186 (767)
Q Consensus 109 sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~s--LafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~ 186 (767)
-...+.|+ ++.++.+.+.+|.|+++|+++++.+..+ - ...... +.+. ++.+++..-.++.+.+||..+.+.+.
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEE
Confidence 35788888 4667778888899999999999987776 2 233333 5553 46777777789999999999999999
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEE-CCcEEEEEcCCCccccCCeEEecCC---CCeEEEEEccCCCeEEE
Q 004217 187 SRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTR---RSLRAVHFHPHAAPLLL 252 (767)
Q Consensus 187 ~l~h~~~VtsVafSPdG~~LAsgS-dd~V~VWDl~t~~~~~~~~~l~~h~---~~VtsVaFSPDG~~Lla 252 (767)
++.....-..++ ++++.|+.+. ++.|.++|..+.+...... ...+. ..++.+.|. +|+ |.+
T Consensus 131 ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~-V~~~g~~v~~lNeLe~~-dG~-lya 195 (268)
T 3nok_A 131 TTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQ-VKLRGQPVELINELECA-NGV-IYA 195 (268)
T ss_dssp EEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEE-CEETTEECCCEEEEEEE-TTE-EEE
T ss_pred EEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEE-eCCCCcccccccccEEe-CCE-EEE
Confidence 987554434444 5677777765 4459999999887655211 11222 245677877 675 443
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.54 E-value=0.0027 Score=66.40 Aligned_cols=136 Identities=10% Similarity=0.102 Sum_probs=92.3
Q ss_pred eEEEEECCCCCeEEEEeCCC--eEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe
Q 004217 110 TIAAAFSPDGKTLASTHGDH--TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS 187 (767)
Q Consensus 110 VtsVaFSpDG~~LASgs~DG--tVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~ 187 (767)
...+.|+ ++.++.+.+.+| .|+++|+++++.+..+.-.. ........+.++.+++..-.++.+.+||..+.+.+.+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 5789999 777777777776 89999999999988876433 3433333332456666666799999999999999999
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEE-CCcEEEEEcCCCccccCCeEEecCC---CCeEEEEEccCCCeEEE
Q 004217 188 RDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTR---RSLRAVHFHPHAAPLLL 252 (767)
Q Consensus 188 l~h~~~VtsVafSPdG~~LAsgS-dd~V~VWDl~t~~~~~~~~~l~~h~---~~VtsVaFSPDG~~Lla 252 (767)
+.....-..++ ++++.|+.+. ++.|.++|..+.+....... .... ..++.+.|. +|+ +.+
T Consensus 123 i~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V-~~~g~~~~~lNELe~~-~G~-lya 186 (262)
T 3nol_A 123 FNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITV-TAHGEELPELNELEWV-DGE-IFA 186 (262)
T ss_dssp EECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEEC-EETTEECCCEEEEEEE-TTE-EEE
T ss_pred EECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEe-ccCCccccccceeEEE-CCE-EEE
Confidence 87544333444 5677666655 45599999998876552111 1111 345667886 665 443
No 243
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.50 E-value=0.051 Score=59.46 Aligned_cols=165 Identities=10% Similarity=0.005 Sum_probs=110.6
Q ss_pred EeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCeEEEE-eCCCeEEEEECCCC----eEEEEEccCCCCcEEEEEc
Q 004217 87 WVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQTG----SCLKVLHGHRRTPWVVRFH 158 (767)
Q Consensus 87 gs~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~LASg-s~DGtVrVWDl~tg----~~l~~L~gH~~~V~sLafs 158 (767)
.+....|+..++.... +......+..|+|++.+..|+.. ...+.|+.+++... .....+.........+++.
T Consensus 88 ~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD 167 (400)
T 3p5b_L 88 FTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 167 (400)
T ss_dssp EEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEE
T ss_pred EeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEE
Confidence 3445778888876552 33445678999999865555544 45788999998752 2333344344567889998
Q ss_pred cCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEEC---CcEEEEEcCCCccccCCeEEecC
Q 004217 159 PLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRT 234 (767)
Q Consensus 159 P~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSd---d~V~VWDl~t~~~~~~~~~l~~h 234 (767)
+.+++++++-...+.|.+.|+........+. .......|+++|.+.+|+.+.. +.|...++....... .....
T Consensus 168 ~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~---~~~~~ 244 (400)
T 3p5b_L 168 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTEN 244 (400)
T ss_dssp TTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE---EECSS
T ss_pred ecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE---EEECC
Confidence 7567777877788999999998665444433 3456789999997777666652 348888887544322 22233
Q ss_pred CCCeEEEEEccCCCeEEEEE
Q 004217 235 RRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 235 ~~~VtsVaFSPDG~~LlaSg 254 (767)
-...+.|+|++++..|..+-
T Consensus 245 l~~P~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 245 IQWPNGITLDLLSGRLYWVD 264 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEE
Confidence 45778999999888777663
No 244
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.45 E-value=0.00097 Score=79.17 Aligned_cols=144 Identities=13% Similarity=0.086 Sum_probs=89.7
Q ss_pred CCCC-CeEEEEEC-CCCCeEEEEeC-C----CeEEEEECCCC-eEEE-EEccCCCCcEEEEEccCCCcEEEEEeCC----
Q 004217 105 PPPR-STIAAAFS-PDGKTLASTHG-D----HTVKIIDCQTG-SCLK-VLHGHRRTPWVVRFHPLNPTIIASGSLD---- 171 (767)
Q Consensus 105 gH~~-sVtsVaFS-pDG~~LASgs~-D----GtVrVWDl~tg-~~l~-~L~gH~~~V~sLafsP~dg~lLaSgS~D---- 171 (767)
+|.- .+...+|| |||++||.+.. + .+|+++|+.++ +.+. .+.. ....+.|+| |++.|+....|
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~Wsp-Dg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGP-DHTSLFYVTKDETLR 245 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECS-STTEEEEEEECTTCC
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEec-CCCEEEEEEECCCCC
Confidence 3443 68889999 99999886543 2 35999999998 6321 1211 134678999 77666666655
Q ss_pred -CeEEEEECCCCeE--EEee--cCCCCeEEEEEcCCCCEEEEEEC---Cc-EEEEEcCCCc-cccCCeEEe-cCCCCeEE
Q 004217 172 -HEVRLWNASTAEC--IGSR--DFYRPIASIAFHASGELLAVASG---HK-LYIWRYNMRE-ETSSPRIVL-RTRRSLRA 240 (767)
Q Consensus 172 -GtVrIWDl~tg~~--i~~l--~h~~~VtsVafSPdG~~LAsgSd---d~-V~VWDl~t~~-~~~~~~~l~-~h~~~Vts 240 (767)
..|.++++.+++. ...+ ........+.|+|||++|+..+. .. |+++|+.++. .. ....+. .......+
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~-~~~~l~~~~~~~~~s 324 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHN-TLEIVRPREKGVRYD 324 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCC-CEEESSCCCTTCCEE
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCc-eeEEeecCCCCceEE
Confidence 3688889887642 2222 23345678899999998887662 22 9999998752 11 001222 23445566
Q ss_pred EEEccCCCeEEEEE
Q 004217 241 VHFHPHAAPLLLTA 254 (767)
Q Consensus 241 VaFSPDG~~LlaSg 254 (767)
+.|+. |+.|+..+
T Consensus 325 ~~~~~-g~~l~~~t 337 (751)
T 2xe4_A 325 VQMHG-TSHLVILT 337 (751)
T ss_dssp EEEET-TTEEEEEE
T ss_pred Eeeee-CCEEEEEe
Confidence 66554 55555544
No 245
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.45 E-value=0.0021 Score=76.26 Aligned_cols=180 Identities=11% Similarity=-0.013 Sum_probs=104.7
Q ss_pred eEEEEEE-cCCCEEEEE-eCC----CeEEEEeCCCC-CCC-CCC-CCeEEEEECCCCCeEEEEeCC-----CeEEEEECC
Q 004217 72 QIFEAGR-DARRGLASW-VEA----ESLHHLRPKYC-PLS-PPP-RSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQ 137 (767)
Q Consensus 72 ~~~vA~s-d~g~~LaSg-s~D----gsIrlWd~~t~-~L~-gH~-~sVtsVaFSpDG~~LASgs~D-----GtVrVWDl~ 137 (767)
.....++ .+|+.|+-. ..+ ..|+++|+.++ +.. .+- .....++|+|||+.|+....| ..|+++++.
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lg 255 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMG 255 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETT
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECC
Confidence 4456777 788777643 333 25999999887 532 111 123468999999988887765 368889988
Q ss_pred CCeE--EEEEc-cCCCCcEEEEEccCCCcEEEEEe---CCCeEEEEECCCC--eE--EEeec-CCCCeEEEEEcCCCCEE
Q 004217 138 TGSC--LKVLH-GHRRTPWVVRFHPLNPTIIASGS---LDHEVRLWNASTA--EC--IGSRD-FYRPIASIAFHASGELL 206 (767)
Q Consensus 138 tg~~--l~~L~-gH~~~V~sLafsP~dg~lLaSgS---~DGtVrIWDl~tg--~~--i~~l~-h~~~VtsVafSPdG~~L 206 (767)
++.. ...+. .+......+.|+| ++++|+..+ ....|.++|+.++ +. ..... ......++.|+..+.++
T Consensus 256 t~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~ 334 (751)
T 2xe4_A 256 KLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLV 334 (751)
T ss_dssp SCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEE
T ss_pred CCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEE
Confidence 7642 23333 2334456789999 777766654 2446888999875 23 22222 33455666655444444
Q ss_pred EEEECC-----cEEEEEcCCCccccCCeE-EecCCCCeEEEEEccCCCeEEEEEe
Q 004217 207 AVASGH-----KLYIWRYNMREETSSPRI-VLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 207 AsgSdd-----~V~VWDl~t~~~~~~~~~-l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
+.+..+ +|..+|+.+.... .. +..+...+.--.|++++..|+++..
T Consensus 335 ~~t~~~~a~~~~L~~~d~~~~~~~---~~~li~~~~~~~l~~~~~~~~~lv~~~~ 386 (751)
T 2xe4_A 335 ILTNEGGAVNHKLLIAPRGQPSDW---SHVLVDHSEDVFMESIAVRSNYLVVAGR 386 (751)
T ss_dssp EEECTTTCTTCEEEEEETTSTTCC---CCEEECCCSSEEEEEEEECSSEEEEEEE
T ss_pred EEeCCCCCCCcEEEEEcCCCcccc---eeeEECCCCCcEEEEEEEECCEEEEEEE
Confidence 444433 2777777643211 12 3444443332334445666766654
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.43 E-value=0.0014 Score=67.55 Aligned_cols=161 Identities=14% Similarity=-0.001 Sum_probs=105.1
Q ss_pred cCCCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEE
Q 004217 79 DARRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWV 154 (767)
Q Consensus 79 d~g~~LaSgs~DgsIrlWd~~t~~----L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~s 154 (767)
+....++.++.++.|..+|.. ++ +......+.++.+.+++.+++. + +.|..+| .+++.+..+......+.+
T Consensus 145 ~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~ 219 (330)
T 3hxj_A 145 SEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTR 219 (330)
T ss_dssp CTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSC
T ss_pred cCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEE-e--CEEEEEC-CCCcEEEEEccCCcceec
Confidence 334557778888899999987 42 2233445677788778875554 4 7899999 778877777666667888
Q ss_pred EEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecC-CCCeEEEEEcCCCCEEEEEECCcEEEEEcCCCccccCCeEEec
Q 004217 155 VRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-YRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLR 233 (767)
Q Consensus 155 LafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h-~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t~~~~~~~~~l~~ 233 (767)
+...+ ++. +..++.++.|..+|. +++.+..+.. ...+..+.+.++|++.+...+++|..+|. +++... ....
T Consensus 220 ~~~~~-~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~---~~~~ 292 (330)
T 3hxj_A 220 PAISE-DGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKW---NFET 292 (330)
T ss_dssp CEECT-TSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEE---EEEC
T ss_pred eEECC-CCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEE---EEEc
Confidence 88887 555 445667888888884 5555555432 23344566676776555444557999985 444333 2223
Q ss_pred CCCCeEEEEEccCCCeEE
Q 004217 234 TRRSLRAVHFHPHAAPLL 251 (767)
Q Consensus 234 h~~~VtsVaFSPDG~~Ll 251 (767)
....+.++...++|..++
T Consensus 293 ~~~~~~~~~~d~~g~l~~ 310 (330)
T 3hxj_A 293 GSWIIATPVIDENGTIYF 310 (330)
T ss_dssp SSCCCSCCEECTTCCEEE
T ss_pred CCccccceEEcCCCEEEE
Confidence 345677788878887444
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.43 E-value=0.00032 Score=81.15 Aligned_cols=163 Identities=11% Similarity=0.105 Sum_probs=105.5
Q ss_pred CCeEEEEeCCCCCCCCC---CCCeEEEEECCCCCeEEEEeCCC-------------------------------------
Q 004217 90 AESLHHLRPKYCPLSPP---PRSTIAAAFSPDGKTLASTHGDH------------------------------------- 129 (767)
Q Consensus 90 DgsIrlWd~~t~~L~gH---~~sVtsVaFSpDG~~LASgs~DG------------------------------------- 129 (767)
++.+.++|..+.+.... .+.-..++++|||+++++.+.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred CceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 34688888887532100 11345678999999999888543
Q ss_pred -eEEEEECCC--CeE-EEEEccCCCCcEEEEEccCCCcEE-EEEeCCCeEEEEECCCCe------------EEEeecCCC
Q 004217 130 -TVKIIDCQT--GSC-LKVLHGHRRTPWVVRFHPLNPTII-ASGSLDHEVRLWNASTAE------------CIGSRDFYR 192 (767)
Q Consensus 130 -tVrVWDl~t--g~~-l~~L~gH~~~V~sLafsP~dg~lL-aSgS~DGtVrIWDl~tg~------------~i~~l~h~~ 192 (767)
.|.|.|..+ ++. +..+.. .....++.++| |++++ +++..+.+|.++|+.+.+ ......-..
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~ 331 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL 331 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS
T ss_pred CcEEEEeCcccCCceeEEEEec-CCCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC
Confidence 377777776 544 445532 23456799999 66654 455578999999999653 344555667
Q ss_pred CeEEEEEcCCCCEEEEEE--CCcEEEEEcCCCc------c-ccCCeEEecCCCC-----eEEEEEccCCCeEEEEEe
Q 004217 193 PIASIAFHASGELLAVAS--GHKLYIWRYNMRE------E-TSSPRIVLRTRRS-----LRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 193 ~VtsVafSPdG~~LAsgS--dd~V~VWDl~t~~------~-~~~~~~l~~h~~~-----VtsVaFSPDG~~LlaSgs 255 (767)
....++|+|+| ++.+.. ++.|.+||+.+.. . ......+..|-.+ -..+.++|||++|+++.+
T Consensus 332 gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 332 GPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp CEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 78899999999 777766 4559999997621 0 1111233333221 123356899998887765
No 248
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.40 E-value=0.0032 Score=73.90 Aligned_cols=176 Identities=12% Similarity=0.115 Sum_probs=109.2
Q ss_pred EEEcCCCEEEEEeCCC-------------------eEEEEeCCCCCC------CCCC-------CCeEEEEECCCCC---
Q 004217 76 AGRDARRGLASWVEAE-------------------SLHHLRPKYCPL------SPPP-------RSTIAAAFSPDGK--- 120 (767)
Q Consensus 76 A~sd~g~~LaSgs~Dg-------------------sIrlWd~~t~~L------~gH~-------~sVtsVaFSpDG~--- 120 (767)
+.......++.+..++ .|.-+|.+++++ ..|. .......+..+|+
T Consensus 236 a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~ 315 (668)
T 1kv9_A 236 AYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRK 315 (668)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEE
T ss_pred EEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEE
Confidence 4444556666666554 388888887742 2232 2333333334675
Q ss_pred eEEEEeCCCeEEEEECCCCeEEEEEccCCC-----------C-c------------------------EEEEEccCCCcE
Q 004217 121 TLASTHGDHTVKIIDCQTGSCLKVLHGHRR-----------T-P------------------------WVVRFHPLNPTI 164 (767)
Q Consensus 121 ~LASgs~DGtVrVWDl~tg~~l~~L~gH~~-----------~-V------------------------~sLafsP~dg~l 164 (767)
.|+.++.+|.++++|..+|+.+..++.... . + ..++++| +..+
T Consensus 316 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp-~~g~ 394 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNP-GTGL 394 (668)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEET-TTTE
T ss_pred EEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECC-CCCE
Confidence 688999999999999999998754432110 0 0 1257777 4444
Q ss_pred EEEE------------------------------------eCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEE
Q 004217 165 IASG------------------------------------SLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAV 208 (767)
Q Consensus 165 LaSg------------------------------------S~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAs 208 (767)
++.. ..++.|..||+.+++.+.............+...+.++++
T Consensus 395 ~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~ 474 (668)
T 1kv9_A 395 VYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQ 474 (668)
T ss_dssp EEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE
T ss_pred EEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEE
Confidence 3321 1348899999999999888765555544455567788888
Q ss_pred EECCc-EEEEEcCCCccccCCeEEecCCC-CeEEEEEccCCCeEEEEEe
Q 004217 209 ASGHK-LYIWRYNMREETSSPRIVLRTRR-SLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 209 gSdd~-V~VWDl~t~~~~~~~~~l~~h~~-~VtsVaFSPDG~~LlaSgs 255 (767)
++.++ |++||.++++.+. .+..... .-.-+.+..+|+..++.+.
T Consensus 475 g~~dg~l~a~d~~tG~~l~---~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 475 GTAAGQMHAYSADKGEALW---QFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp ECTTSEEEEEETTTCCEEE---EEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred ECCcccchhhhhhcChhhe---EecCCCCcccCceEEEECCEEEEEEEe
Confidence 87555 9999999998765 2222211 1123445567875555554
No 249
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.38 E-value=0.0032 Score=66.00 Aligned_cols=138 Identities=12% Similarity=0.063 Sum_probs=92.6
Q ss_pred CeEEEEECCCCCeEEEEeC--CCeEEEEECCCCeEEEEEccCC-CCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEE
Q 004217 109 STIAAAFSPDGKTLASTHG--DHTVKIIDCQTGSCLKVLHGHR-RTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI 185 (767)
Q Consensus 109 sVtsVaFSpDG~~LASgs~--DGtVrVWDl~tg~~l~~L~gH~-~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i 185 (767)
....++|++|+.++++.+. +..|+++|+.+++.+..+.-.. .....+.+. ++.++++.-.++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 3689999998755555443 5799999999999888775222 223345554 3566677777899999999999999
Q ss_pred EeecCC-CCeEEEEEcCCCCEEEEEE-CCcEEEEEcCCCccccCCeEEecC---CCCeEEEEEccCCCeEEEE
Q 004217 186 GSRDFY-RPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRT---RRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 186 ~~l~h~-~~VtsVafSPdG~~LAsgS-dd~V~VWDl~t~~~~~~~~~l~~h---~~~VtsVaFSPDG~~LlaS 253 (767)
..+... .. ...+++||+.++++. ++.|.++|..+.+...... .... -..++.+.|. +|. +.+.
T Consensus 100 ~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~-Vg~~~~p~~~~nele~~-dg~-lyvn 167 (266)
T 2iwa_A 100 KNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHN-VKYNGHRVIRLNELEYI-NGE-VWAN 167 (266)
T ss_dssp EEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEE-CEETTEECCCEEEEEEE-TTE-EEEE
T ss_pred EEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEE-ECCCCcccccceeEEEE-CCE-EEEe
Confidence 887644 22 234556787666655 3449999999887654111 1111 1246788888 664 4443
No 250
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.36 E-value=0.021 Score=67.63 Aligned_cols=173 Identities=8% Similarity=0.003 Sum_probs=119.2
Q ss_pred EEcCCCEEEEEeCCCeEEEEeCCCCCCC------------CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEE
Q 004217 77 GRDARRGLASWVEAESLHHLRPKYCPLS------------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV 144 (767)
Q Consensus 77 ~sd~g~~LaSgs~DgsIrlWd~~t~~L~------------gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~ 144 (767)
..+....|+.|+.++-|..|+..++++. -....|.++...++|++|..|+.++-|.+||..+++....
T Consensus 363 ~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~ 442 (795)
T 4a2l_A 363 VEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENF 442 (795)
T ss_dssp EECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred EECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEe
Confidence 3455667888998888999998765321 1235799999998888567778777899999988764432
Q ss_pred Ec----cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-------CCCCeEEEEEcCCCCEEEEEECCc
Q 004217 145 LH----GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-------FYRPIASIAFHASGELLAVASGHK 213 (767)
Q Consensus 145 L~----gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-------h~~~VtsVafSPdG~~LAsgSdd~ 213 (767)
.. .....|.++...+ ++++.+.. . +.+.+||..+++...... ....|.++..+++|++.+... ++
T Consensus 443 ~~~~~~l~~~~v~~i~~d~-~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~G 518 (795)
T 4a2l_A 443 NQRNSQLVNENVYAILPDG-EGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EG 518 (795)
T ss_dssp CTTTSCCSCSCEEEEEECS-SSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SC
T ss_pred ecCCCCcCCCeeEEEEECC-CCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-Cc
Confidence 21 1345788998887 66666554 3 458999998876544321 235789999999998766554 77
Q ss_pred EEEEEcCCCccccCC---eEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 214 LYIWRYNMREETSSP---RIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 214 V~VWDl~t~~~~~~~---~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
|..||..+.+. ... .........|.++...++|...+.+.
T Consensus 519 l~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~ 561 (795)
T 4a2l_A 519 LSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR 561 (795)
T ss_dssp EEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES
T ss_pred eEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC
Confidence 99999876643 100 00011345799999999999666553
No 251
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.36 E-value=0.014 Score=63.61 Aligned_cols=165 Identities=9% Similarity=-0.029 Sum_probs=110.1
Q ss_pred EeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCeE-EEEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCC
Q 004217 87 WVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNP 162 (767)
Q Consensus 87 gs~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~L-ASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg 162 (767)
.+....|+..++.... +......+..++|++.+..| ++-...+.|+.++++.+.....+.........+++.+.++
T Consensus 92 ~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g 171 (386)
T 3v65_B 92 FANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD 171 (386)
T ss_dssp EECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTT
T ss_pred eecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCC
Confidence 3445678888887653 22334568899999855555 4545678999999887654444443334567888987567
Q ss_pred cEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEEC---CcEEEEEcCCCccccCCeEEecCCCCe
Q 004217 163 TIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRSL 238 (767)
Q Consensus 163 ~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSd---d~V~VWDl~t~~~~~~~~~l~~h~~~V 238 (767)
+++++-...+.|.+.++........+. .......++++|.+.+|+.+.. +.|..+++....... .....-...
T Consensus 172 ~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~~~~~~~~P 248 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI---IADTHLFWP 248 (386)
T ss_dssp EEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---EECSSCSCE
T ss_pred eEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE---EEECCCCCe
Confidence 777777778899999987554333332 3356789999998777666653 348888876543211 222334457
Q ss_pred EEEEEccCCCeEEEEE
Q 004217 239 RAVHFHPHAAPLLLTA 254 (767)
Q Consensus 239 tsVaFSPDG~~LlaSg 254 (767)
+.|+|+|++..|..+-
T Consensus 249 nGlavd~~~~~lY~aD 264 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVD 264 (386)
T ss_dssp EEEEEEGGGTEEEEEE
T ss_pred eeEEEeCCCCEEEEEE
Confidence 8999999888777663
No 252
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.35 E-value=0.035 Score=58.42 Aligned_cols=163 Identities=10% Similarity=0.005 Sum_probs=103.9
Q ss_pred CCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCeEE-EEeCCCeEEEEECCC----CeEEEEEccCCCCcEEEEEccC
Q 004217 89 EAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQT----GSCLKVLHGHRRTPWVVRFHPL 160 (767)
Q Consensus 89 ~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~LA-Sgs~DGtVrVWDl~t----g~~l~~L~gH~~~V~sLafsP~ 160 (767)
....|+..++.... +........+++|+++++.|+ +-..++.|..+|+.+ ......+...-..+..+++.+.
T Consensus 8 ~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 8 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp CBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 34557777776542 223345678999998665554 445568999999876 2222233333345678999874
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEEC---CcEEEEEcCCCccccCCeEEecCCC
Q 004217 161 NPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRR 236 (767)
Q Consensus 161 dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSd---d~V~VWDl~t~~~~~~~~~l~~h~~ 236 (767)
+++++++-...+.|.+.|.........+. .......++++|.+.+|+.+.. ++|...++....... .....-.
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~---~~~~~~~ 164 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTENIQ 164 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE---EECSSCS
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE---EEECCCC
Confidence 66777777788999999987654433332 3456789999997776655552 348888876443211 1222345
Q ss_pred CeEEEEEccCCCeEEEEE
Q 004217 237 SLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 237 ~VtsVaFSPDG~~LlaSg 254 (767)
..+.|+|++++..|..+-
T Consensus 165 ~P~gla~d~~~~~lY~~D 182 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVD 182 (316)
T ss_dssp CEEEEEEETTTTEEEEEE
T ss_pred CceEEEEeccCCEEEEEE
Confidence 678999999888777664
No 253
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.34 E-value=0.0047 Score=72.74 Aligned_cols=75 Identities=11% Similarity=0.174 Sum_probs=56.3
Q ss_pred EEEECCCCCeEEEEeCCCe-------------------EEEEECCCCeEEEEEcc--CC-------CCcEEEEEccCCCc
Q 004217 112 AAAFSPDGKTLASTHGDHT-------------------VKIIDCQTGSCLKVLHG--HR-------RTPWVVRFHPLNPT 163 (767)
Q Consensus 112 sVaFSpDG~~LASgs~DGt-------------------VrVWDl~tg~~l~~L~g--H~-------~~V~sLafsP~dg~ 163 (767)
.+++++++.+|+.+..++. |..||.++|+.+..++. |. ..+....... +++
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~-~G~ 317 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI-DGK 317 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE-TTE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc-CCc
Confidence 5789998899999988764 99999999999988764 21 1121222222 343
Q ss_pred ---EEEEEeCCCeEEEEECCCCeEEEe
Q 004217 164 ---IIASGSLDHEVRLWNASTAECIGS 187 (767)
Q Consensus 164 ---lLaSgS~DGtVrIWDl~tg~~i~~ 187 (767)
.++.++.+|.++++|.++|+.+..
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEecc
Confidence 788899999999999999998754
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.28 E-value=0.026 Score=60.56 Aligned_cols=163 Identities=9% Similarity=-0.035 Sum_probs=107.2
Q ss_pred CCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCeEE-EEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcE
Q 004217 89 EAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTI 164 (767)
Q Consensus 89 ~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~LA-Sgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~l 164 (767)
....|+..++.... +......+..++|++....|+ +-...+.|+.++++.+.....+.........+++.+.++++
T Consensus 51 ~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 130 (349)
T 3v64_C 51 NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 130 (349)
T ss_dssp CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE
T ss_pred cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeE
Confidence 44557767765542 222334588999998555554 44567899999988765444444334556789998756777
Q ss_pred EEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEEC---CcEEEEEcCCCccccCCeEEecCCCCeEE
Q 004217 165 IASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRSLRA 240 (767)
Q Consensus 165 LaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSd---d~V~VWDl~t~~~~~~~~~l~~h~~~Vts 240 (767)
+++-...+.|.+.++........+. .......++++|.+.+|+.+.. ++|..++++...... .....-...+.
T Consensus 131 y~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~~~~~~~~PnG 207 (349)
T 3v64_C 131 YWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI---IADTHLFWPNG 207 (349)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---SCCSSCSCEEE
T ss_pred EEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE---EEECCCCCcce
Confidence 7877778899999987654333332 3356789999997776666653 348888877543211 11223445789
Q ss_pred EEEccCCCeEEEEE
Q 004217 241 VHFHPHAAPLLLTA 254 (767)
Q Consensus 241 VaFSPDG~~LlaSg 254 (767)
|+|+|++..|..+-
T Consensus 208 la~d~~~~~lY~aD 221 (349)
T 3v64_C 208 LTIDYAGRRMYWVD 221 (349)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEeCCCCEEEEEE
Confidence 99999888777663
No 255
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.23 E-value=0.05 Score=56.21 Aligned_cols=135 Identities=13% Similarity=0.068 Sum_probs=90.5
Q ss_pred CCeEEEEECCCCCeEEEEeCCC--eEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEE
Q 004217 108 RSTIAAAFSPDGKTLASTHGDH--TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI 185 (767)
Q Consensus 108 ~sVtsVaFSpDG~~LASgs~DG--tVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i 185 (767)
.-...+.|+. +.++.+.+.+| .|+++|+++++.+..+.-... .........+++++...-.++.+.+||..+.+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 3467899986 56666666654 899999999999888754332 3333233324667777778999999999999999
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEE-CCcEEEEEcCCCccccCCeEEecCC---CCeEEEEEccCCC
Q 004217 186 GSRDFYRPIASIAFHASGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTR---RSLRAVHFHPHAA 248 (767)
Q Consensus 186 ~~l~h~~~VtsVafSPdG~~LAsgS-dd~V~VWDl~t~~~~~~~~~l~~h~---~~VtsVaFSPDG~ 248 (767)
.++.....-..++ +++..|+++. ++.|.++|..+.+...... ...+. ..++.+.|. +|+
T Consensus 99 ~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~-V~~~g~~~~~lNeLe~~-~G~ 161 (243)
T 3mbr_X 99 ARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIK-VTAGGRPLDNLNELEWV-NGE 161 (243)
T ss_dssp EEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEE-CEETTEECCCEEEEEEE-TTE
T ss_pred EEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEE-EccCCcccccceeeEEe-CCE
Confidence 9987655444555 4666555554 4459999999887655211 11121 345667766 565
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.15 E-value=0.009 Score=62.40 Aligned_cols=140 Identities=8% Similarity=0.071 Sum_probs=91.2
Q ss_pred CeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc--------------------CCCCcEEEEEccCCCcEEEEE
Q 004217 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG--------------------HRRTPWVVRFHPLNPTIIASG 168 (767)
Q Consensus 109 sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g--------------------H~~~V~sLafsP~dg~lLaSg 168 (767)
...+++|+++|++++++..++.|..||..+++.. .+.. ....+..+++.+.+++ |+.+
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 4567889999998888888999999998776533 2321 0135788999873444 4444
Q ss_pred eCCCeEEEEECCCCeEEEeec-----CCCCeEEEEEcC-CCCEEEEEEC------------------CcEEEEEcCCCcc
Q 004217 169 SLDHEVRLWNASTAECIGSRD-----FYRPIASIAFHA-SGELLAVASG------------------HKLYIWRYNMREE 224 (767)
Q Consensus 169 S~DGtVrIWDl~tg~~i~~l~-----h~~~VtsVafSP-dG~~LAsgSd------------------d~V~VWDl~t~~~ 224 (767)
...+.|..+|..+++...... .......+++++ +|++.++... ++|..||..+++.
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 455568889987654322211 123578899999 9987766532 3488888776653
Q ss_pred ccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 225 TSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 225 ~~~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
.. ........+.|+|+|||++|.++.
T Consensus 178 ~~----~~~~~~~p~gia~~~dg~~lyv~d 203 (322)
T 2fp8_A 178 TL----LLKELHVPGGAEVSADSSFVLVAE 203 (322)
T ss_dssp EE----EEEEESCCCEEEECTTSSEEEEEE
T ss_pred EE----eccCCccCcceEECCCCCEEEEEe
Confidence 22 112223456899999999766653
No 257
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.14 E-value=0.069 Score=63.18 Aligned_cols=178 Identities=9% Similarity=0.010 Sum_probs=120.7
Q ss_pred EEEEEEcCCCEEEEEeCCCeEEEEeCCCCCCC----------CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEE
Q 004217 73 IFEAGRDARRGLASWVEAESLHHLRPKYCPLS----------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCL 142 (767)
Q Consensus 73 ~~vA~sd~g~~LaSgs~DgsIrlWd~~t~~L~----------gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l 142 (767)
+.....+....|+.|+.++-|..|+....++. -....|.++...++|++. .|+.++-|..||..+++..
T Consensus 312 i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~ 390 (795)
T 4a2l_A 312 VRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFT 390 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEE
T ss_pred EEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEE
Confidence 33344566777888998888999987654321 123469999999888644 5777777999998877644
Q ss_pred EEEcc--------CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-----CCCCeEEEEEcCCCCEEEEE
Q 004217 143 KVLHG--------HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-----FYRPIASIAFHASGELLAVA 209 (767)
Q Consensus 143 ~~L~g--------H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-----h~~~VtsVafSPdG~~LAsg 209 (767)
..... ....|.++...+ ++++|..|+.++.|.+||..+++...... ....|.++..+++|++.+..
T Consensus 391 ~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt 469 (795)
T 4a2l_A 391 SYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT 469 (795)
T ss_dssp EECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE
T ss_pred EEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe
Confidence 32211 135688888877 67746667777889999998877554321 24578999999999866555
Q ss_pred ECCcEEEEEcCCCccccCCeE---EecCCCCeEEEEEccCCCeEEEE
Q 004217 210 SGHKLYIWRYNMREETSSPRI---VLRTRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 210 Sdd~V~VWDl~t~~~~~~~~~---l~~h~~~VtsVaFSPDG~~LlaS 253 (767)
. ++|.+||..+++....... ..-....|.++...++|...+.+
T Consensus 470 ~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 470 L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 4 7799999877653220000 01123678999999999865554
No 258
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.14 E-value=0.016 Score=66.98 Aligned_cols=160 Identities=9% Similarity=0.098 Sum_probs=97.7
Q ss_pred CeEEEEeCCCCC------CCCCC--------CCeEEEEEC-CCCC---eEEEEeCCCeEEEEECCCCeEEEEEccCCC--
Q 004217 91 ESLHHLRPKYCP------LSPPP--------RSTIAAAFS-PDGK---TLASTHGDHTVKIIDCQTGSCLKVLHGHRR-- 150 (767)
Q Consensus 91 gsIrlWd~~t~~------L~gH~--------~sVtsVaFS-pDG~---~LASgs~DGtVrVWDl~tg~~l~~L~gH~~-- 150 (767)
+.|.-+|.++++ +..|. ..+. +... .+|+ .|+.++.+|.++++|.++|+.+..+.....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 577888887763 22232 1222 2332 4674 788899999999999999998876643310
Q ss_pred ----------C-c--------------------------------EEEEEccCCCcEEEEEe------------------
Q 004217 151 ----------T-P--------------------------------WVVRFHPLNPTIIASGS------------------ 169 (767)
Q Consensus 151 ----------~-V--------------------------------~sLafsP~dg~lLaSgS------------------ 169 (767)
. + ..++++|..+.+++...
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 0 0 13456663333333221
Q ss_pred --------------CCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEEecC
Q 004217 170 --------------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVLRT 234 (767)
Q Consensus 170 --------------~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h 234 (767)
.++.|..||+.+++.+........+..-.....+.+++.++.++ |+.||.++++.+. .+..
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW---~~~~- 525 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELW---KFQT- 525 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEE---EEEC-
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEE---EecC-
Confidence 36889999999999887765443332222223466777777554 9999999999876 2222
Q ss_pred CCCe--EEEEEccCCCeEEEEEe
Q 004217 235 RRSL--RAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 235 ~~~V--tsVaFSPDG~~LlaSgs 255 (767)
...+ .-+.|..+|+.+++...
T Consensus 526 ~~g~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 526 GSGIVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp SSCCCSCCEEEEETTEEEEEEEE
T ss_pred CCCcccCceEEEECCEEEEEEEc
Confidence 2222 23667788886655443
No 259
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.13 E-value=0.085 Score=56.48 Aligned_cols=177 Identities=11% Similarity=0.013 Sum_probs=111.1
Q ss_pred eEEEEEEcC-CCEEEEEeCCCeEEEEeCCCCCC----CCCCCCeEEEEECCCCCeE-EEEeCCCeEEEEECCCCeEEEEE
Q 004217 72 QIFEAGRDA-RRGLASWVEAESLHHLRPKYCPL----SPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVL 145 (767)
Q Consensus 72 ~~~vA~sd~-g~~LaSgs~DgsIrlWd~~t~~L----~gH~~sVtsVaFSpDG~~L-ASgs~DGtVrVWDl~tg~~l~~L 145 (767)
+..+++... +...++-...+.|..++...... .........+++.+.+..| ++-...+.|.+.+++.......+
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~ 154 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 154 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE
Confidence 445555533 44444555678898888876521 1223456789999855444 55556789999998765433344
Q ss_pred ccCCCCcEEEEEccCCCcEEEEEeCC-CeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEEC--CcEEEEEcCC
Q 004217 146 HGHRRTPWVVRFHPLNPTIIASGSLD-HEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIWRYNM 221 (767)
Q Consensus 146 ~gH~~~V~sLafsP~dg~lLaSgS~D-GtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSd--d~V~VWDl~t 221 (767)
...-.....++++|.++.++++-..+ +.|..+++.......... .-...+.++|+|++..|..+.. +.|..+|+..
T Consensus 155 ~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 155 WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 44445678999999566667766666 889888887543333322 3345789999998887777763 3499999875
Q ss_pred CccccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 004217 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 222 ~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaS 253 (767)
..... ...........+++. . ..+..+
T Consensus 235 ~~~~~---~~~~~~~~P~giav~-~-~~ly~t 261 (349)
T 3v64_C 235 SHRKA---VISQGLPHPFAITVF-E-DSLYWT 261 (349)
T ss_dssp CSCEE---EECSSCSSEEEEEEE-T-TEEEEE
T ss_pred CceEE---EEeCCCCCceEEEEE-C-CEEEEe
Confidence 43211 222334456778873 3 345444
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.11 E-value=0.015 Score=66.88 Aligned_cols=136 Identities=10% Similarity=0.040 Sum_probs=87.3
Q ss_pred CCCC---eEEEEeCCCeEEEEECCCCeEEEEEccCC-------------CCc--------------------------EE
Q 004217 117 PDGK---TLASTHGDHTVKIIDCQTGSCLKVLHGHR-------------RTP--------------------------WV 154 (767)
Q Consensus 117 pDG~---~LASgs~DGtVrVWDl~tg~~l~~L~gH~-------------~~V--------------------------~s 154 (767)
.+|+ .++.++.+|.+.++|.++|+.+..++-.. .++ ..
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 390 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGV 390 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCC
Confidence 4774 57788999999999999999887664221 111 23
Q ss_pred EEEccCCCcEEEEEe-------------------------------------CCCeEEEEECCCCeEEEeecCCCCeEEE
Q 004217 155 VRFHPLNPTIIASGS-------------------------------------LDHEVRLWNASTAECIGSRDFYRPIASI 197 (767)
Q Consensus 155 LafsP~dg~lLaSgS-------------------------------------~DGtVrIWDl~tg~~i~~l~h~~~VtsV 197 (767)
++|+| +..+++... .++.|..||+.+++.+..+.....+...
T Consensus 391 ~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~ 469 (571)
T 2ad6_A 391 DSYDP-ESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGG 469 (571)
T ss_dssp CEEET-TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSB
T ss_pred ceECC-CCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccce
Confidence 57788 445554432 3578999999999998887654444433
Q ss_pred EEcCCCCEEEEEECC-cEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 198 AFHASGELLAVASGH-KLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 198 afSPdG~~LAsgSdd-~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
.+...+..+++++.+ .|+.||.++++.+. ....+....-.-+.+..+|+.++.+..
T Consensus 470 ~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw--~~~~~~~~~~~p~~~~~~G~~yv~~~~ 526 (571)
T 2ad6_A 470 TLYTKGGLVWYATLDGYLKALDNKDGKELW--NFKMPSGGIGSPMTYSFKGKQYIGSMY 526 (571)
T ss_dssp CEEETTTEEEEECTTSEEEEEETTTCCEEE--EEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred eEEECCCEEEEEcCCCeEEEEECCCCCEEE--EEeCCCCcEeeeEEEEECCEEEEEEEC
Confidence 333445666667754 49999999998766 111222111223446678886665544
No 261
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.04 E-value=0.0058 Score=64.89 Aligned_cols=140 Identities=6% Similarity=-0.059 Sum_probs=90.8
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC------CC-------CCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 81 RRGLASWVEAESLHHLRPKYCPLS------PP-------PRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 81 g~~LaSgs~DgsIrlWd~~t~~L~------gH-------~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
+..++.++.++.|..+|.+++++. .. ...+.+ ....++..|+.++.++.|..+|.++|+.+..+..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 566677777888888888776321 11 122322 1222456788888999999999999998877765
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCe------EEEEEcCCCCEEEEEEC-CcEEEEEcC
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPI------ASIAFHASGELLAVASG-HKLYIWRYN 220 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~V------tsVafSPdG~~LAsgSd-d~V~VWDl~ 220 (767)
........... +..++.++.++.|..+|..+++.+........+ ...... + ..++++.. +.|..+|..
T Consensus 132 ~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~-~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 132 AGEALSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-F-GAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp SSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-T-TEEEECCTTTEEEEEETT
T ss_pred CCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-C-CEEEEEcCCCEEEEEECC
Confidence 43322222332 356777888999999999999988876543332 122222 3 45566664 459999999
Q ss_pred CCcccc
Q 004217 221 MREETS 226 (767)
Q Consensus 221 t~~~~~ 226 (767)
+++...
T Consensus 207 tG~~~w 212 (376)
T 3q7m_A 207 QGQMIW 212 (376)
T ss_dssp TCCEEE
T ss_pred CCcEEE
Confidence 887654
No 262
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.02 E-value=0.19 Score=60.32 Aligned_cols=164 Identities=10% Similarity=0.005 Sum_probs=109.0
Q ss_pred EeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCe-EEEEeCCCeEEEEECCCC----eEEEEEccCCCCcEEEEEc
Q 004217 87 WVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKT-LASTHGDHTVKIIDCQTG----SCLKVLHGHRRTPWVVRFH 158 (767)
Q Consensus 87 gs~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~-LASgs~DGtVrVWDl~tg----~~l~~L~gH~~~V~sLafs 158 (767)
.+....|+..++.... +......+.+|+|++.... +++-...+.|+.+++... .....+......+..|++.
T Consensus 400 ~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 400 FTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp EECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred cccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 3455667777776542 3344567889999985444 455555788999998753 2233444345567789998
Q ss_pred cCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEEC---CcEEEEEcCCCccccCCeEEecC
Q 004217 159 PLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRT 234 (767)
Q Consensus 159 P~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSd---d~V~VWDl~t~~~~~~~~~l~~h 234 (767)
+.+++++++-...+.|.+.++........+. .......|+++|.+.+|+.+.. ++|.+.++....... .....
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~---lv~~~ 556 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTEN 556 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE---EECSS
T ss_pred ecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE---EEeCC
Confidence 8566788888888999999998655443332 4456889999998776666652 348888887554322 22333
Q ss_pred CCCeEEEEEccCCCeEEEE
Q 004217 235 RRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 235 ~~~VtsVaFSPDG~~LlaS 253 (767)
-...+.|++++.+..|..+
T Consensus 557 l~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 557 IQWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp CSCEEEEEEETTTTEEEEE
T ss_pred CCCceEEEEecCCCeEEEE
Confidence 4578899999888877766
No 263
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.98 E-value=0.027 Score=62.38 Aligned_cols=148 Identities=12% Similarity=0.034 Sum_probs=97.1
Q ss_pred eEEEEEEc-CCCEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCeEEEEeCC-C----eEEEEECCCCeEE
Q 004217 72 QIFEAGRD-ARRGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGD-H----TVKIIDCQTGSCL 142 (767)
Q Consensus 72 ~~~vA~sd-~g~~LaSgs~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~LASgs~D-G----tVrVWDl~tg~~l 142 (767)
+..+++.. ++..|+.....+.|+.+|.+..+ +.........|+|+++|++|+.+... + .+.+++. .+...
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~ 217 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFK 217 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSC
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCcee
Confidence 55566664 34556655555889999987753 23345568899999999966666542 1 3444443 23211
Q ss_pred --EEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe--ecCCCCeEEEEEcCCCCEEEEEEC--CcEEE
Q 004217 143 --KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--RDFYRPIASIAFHASGELLAVASG--HKLYI 216 (767)
Q Consensus 143 --~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~--l~h~~~VtsVafSPdG~~LAsgSd--d~V~V 216 (767)
..+.. ......++++|.++.++++-..++.|..+|..++..... .........++|+|+|++|..+.. +.|..
T Consensus 218 ~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 218 VITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp SEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 22321 234567889996677777777789999999987765332 223345778999999997776653 44999
Q ss_pred EEcCC
Q 004217 217 WRYNM 221 (767)
Q Consensus 217 WDl~t 221 (767)
+|.+.
T Consensus 297 ~~~d~ 301 (430)
T 3tc9_A 297 SDYDW 301 (430)
T ss_dssp EEEET
T ss_pred EeCCc
Confidence 88764
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.97 E-value=0.069 Score=58.06 Aligned_cols=177 Identities=11% Similarity=0.012 Sum_probs=109.8
Q ss_pred eEEEEEEc-CCCEEEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCeE-EEEeCCCeEEEEECCCCeEEEEE
Q 004217 72 QIFEAGRD-ARRGLASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVL 145 (767)
Q Consensus 72 ~~~vA~sd-~g~~LaSgs~DgsIrlWd~~t~~----L~gH~~sVtsVaFSpDG~~L-ASgs~DGtVrVWDl~tg~~l~~L 145 (767)
+..+++.. ++...++-...+.|..++..... +.........+++++.+..| ++-...+.|.+.+++.......+
T Consensus 118 ~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~ 197 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 197 (386)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE
T ss_pred cEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee
Confidence 44455553 34444455567888888887552 11222345678888755544 55555778999998755444444
Q ss_pred ccCCCCcEEEEEccCCCcEEEEEeCC-CeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEEC--CcEEEEEcCC
Q 004217 146 HGHRRTPWVVRFHPLNPTIIASGSLD-HEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIWRYNM 221 (767)
Q Consensus 146 ~gH~~~V~sLafsP~dg~lLaSgS~D-GtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSd--d~V~VWDl~t 221 (767)
...-.....++++|.++.++++-..+ +.|..+++.......... .-...+.|+|+|++..|..+.. +.|..+|+..
T Consensus 198 ~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 198 WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 44446788999999566666665555 788888887544333332 3345789999998887777763 3499999875
Q ss_pred CccccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 004217 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 222 ~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaS 253 (767)
..... ...........|++. +..++.+
T Consensus 278 ~~~~~---~~~~~~~~P~giav~--~~~ly~t 304 (386)
T 3v65_B 278 SHRKA---VISQGLPHPFAITVF--EDSLYWT 304 (386)
T ss_dssp CSCEE---EECSSCSSEEEEEEE--TTEEEEE
T ss_pred CeeEE---EEECCCCCceEEEEE--CCEEEEe
Confidence 43211 222234456778873 3345544
No 265
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.90 E-value=0.0047 Score=65.66 Aligned_cols=132 Identities=11% Similarity=0.041 Sum_probs=86.5
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC--CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc-CCCCcEEEEE
Q 004217 81 RRGLASWVEAESLHHLRPKYCPLS--PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG-HRRTPWVVRF 157 (767)
Q Consensus 81 g~~LaSgs~DgsIrlWd~~t~~L~--gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g-H~~~V~sLaf 157 (767)
+..++.++.++.+..+|..++++. ........+.. ++..|+.++.++.|..+|..+|+.+..... ....+.....
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~ 316 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL 316 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE
Confidence 456777778888999998876422 11223444444 466788888899999999999998877652 2223333333
Q ss_pred ccCCCcEEEEEeCCCeEEEEECCCCeEEEeecC-CCCeEEEEEcCCCCEEEEEEC-CcEEEEE
Q 004217 158 HPLNPTIIASGSLDHEVRLWNASTAECIGSRDF-YRPIASIAFHASGELLAVASG-HKLYIWR 218 (767)
Q Consensus 158 sP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h-~~~VtsVafSPdG~~LAsgSd-d~V~VWD 218 (767)
. +..++.++.+|.|.++|..+++.+..... ...+.......+ ..|++++. +.|+.||
T Consensus 317 ~---~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~-~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 317 Y---NGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAAD-GKLLIQAKDGTVYSIT 375 (376)
T ss_dssp E---TTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEET-TEEEEEBTTSCEEEEE
T ss_pred E---CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEEC-CEEEEEeCCCEEEEEe
Confidence 2 46788888999999999999998877653 333322111123 45555664 4588886
No 266
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.89 E-value=0.038 Score=64.22 Aligned_cols=160 Identities=10% Similarity=0.051 Sum_probs=96.5
Q ss_pred eEEEEeCCCCCC------CCCC--------CCeEEEEEC-CCC---CeEEEEeCCCeEEEEECCCCeEEEEEccCC----
Q 004217 92 SLHHLRPKYCPL------SPPP--------RSTIAAAFS-PDG---KTLASTHGDHTVKIIDCQTGSCLKVLHGHR---- 149 (767)
Q Consensus 92 sIrlWd~~t~~L------~gH~--------~sVtsVaFS-pDG---~~LASgs~DGtVrVWDl~tg~~l~~L~gH~---- 149 (767)
.|.-+|.+++++ ..|. ..+. +... .+| +.++.++.+|.+.++|.++|+.+.......
T Consensus 279 sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~ 357 (599)
T 1w6s_A 279 TIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNV 357 (599)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred eEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccc
Confidence 677777777632 2221 2222 3333 577 567788999999999999999887654211
Q ss_pred --------C-Cc--------------------------EEEEEccCCCcEEEEE--------------------------
Q 004217 150 --------R-TP--------------------------WVVRFHPLNPTIIASG-------------------------- 168 (767)
Q Consensus 150 --------~-~V--------------------------~sLafsP~dg~lLaSg-------------------------- 168 (767)
+ .+ ..++++| +..+++..
T Consensus 358 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 436 (599)
T 1w6s_A 358 FKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDP-KRELFFMGINHICMDWEPFMLPYKAGQFFVGATL 436 (599)
T ss_dssp EEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred ccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCC-CCCEEEEeccccceeeecccccccCCcceecccc
Confidence 1 11 1356666 44444332
Q ss_pred -------e------CCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEEecC
Q 004217 169 -------S------LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVLRT 234 (767)
Q Consensus 169 -------S------~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~~h 234 (767)
+ .++.|..||+.+++.+.......++..-.....+.+++.++.++ |+.||.++++.+.. ...+.
T Consensus 437 ~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~--~~l~~ 514 (599)
T 1w6s_A 437 NMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK--FKIPS 514 (599)
T ss_dssp EEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE--EECSS
T ss_pred eeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEE--eeCCC
Confidence 1 35789999999999888765443332212233566677777554 99999999998761 11222
Q ss_pred CCCeEEEEEccCCCeEEEEEe
Q 004217 235 RRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 235 ~~~VtsVaFSPDG~~LlaSgs 255 (767)
.....-+.+..+|+.+++...
T Consensus 515 g~~~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 515 GAIGYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp CCCSCCEEEEETTEEEEEEEE
T ss_pred CcEeccEEEEeCCEEEEEEEc
Confidence 222233556678886555443
No 267
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.86 E-value=0.048 Score=64.40 Aligned_cols=170 Identities=12% Similarity=0.017 Sum_probs=114.1
Q ss_pred EEcCCCEEEEEeCCCeEEEEeCCCCCCC-------CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEc--c
Q 004217 77 GRDARRGLASWVEAESLHHLRPKYCPLS-------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH--G 147 (767)
Q Consensus 77 ~sd~g~~LaSgs~DgsIrlWd~~t~~L~-------gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~--g 147 (767)
..+....|+.|+.++-|..|+..+.++. .....|.++...++|.+.+ |+.++-+..+|..+++...... .
T Consensus 369 ~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~ 447 (781)
T 3v9f_A 369 CDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKN 447 (781)
T ss_dssp EECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTT
T ss_pred EEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCC
Confidence 3355567888887777888888754221 2345699999988886554 6666778999988776433221 1
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-C-----CCCeEEEEEcCCCCEEEEEECCcEEEEEcCC
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-F-----YRPIASIAFHASGELLAVASGHKLYIWRYNM 221 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h-----~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t 221 (767)
....|.++...+ ++.+.+ |.. +.|.+||..+++...... . ...|.++..+++|++.+...+++|..||..+
T Consensus 448 ~~~~v~~i~~d~-~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~ 524 (781)
T 3v9f_A 448 ELLDVRVFYEDK-NKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDM 524 (781)
T ss_dssp CCCCEEEEEECT-TSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTC
T ss_pred CCCeEEEEEECC-CCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCC
Confidence 345788888877 565555 444 568999988766543322 1 3678999999999877655557799999876
Q ss_pred CccccCCeEEec---CCCCeEEEEEccCCCeEEEE
Q 004217 222 REETSSPRIVLR---TRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 222 ~~~~~~~~~l~~---h~~~VtsVaFSPDG~~LlaS 253 (767)
.+... .... ....|.++...++|...+.+
T Consensus 525 ~~~~~---~~~~~~l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 525 QLVRK---FNQYEGFCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp CEEEE---ECTTTTCSCSCEEEEEECTTSCEEEEE
T ss_pred CeEEE---ccCCCCCCCCeeEEEEECCCCCEEEEE
Confidence 54322 1111 24578999999999966655
No 268
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.85 E-value=0.002 Score=70.54 Aligned_cols=89 Identities=13% Similarity=-0.081 Sum_probs=71.2
Q ss_pred eEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEe----------CCCeEEEEECCCCeEEEeecCC--------
Q 004217 130 TVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS----------LDHEVRLWNASTAECIGSRDFY-------- 191 (767)
Q Consensus 130 tVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS----------~DGtVrIWDl~tg~~i~~l~h~-------- 191 (767)
+|.++|..+++.+.++..-..+ .+.++| ++++++.+. .+++|.+||+.+++.+..+...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 8899999999999988655555 799999 666666664 4789999999999999887532
Q ss_pred CCeEEEEEcCCCCEEEEEEC---CcEEE--EEcCC
Q 004217 192 RPIASIAFHASGELLAVASG---HKLYI--WRYNM 221 (767)
Q Consensus 192 ~~VtsVafSPdG~~LAsgSd---d~V~V--WDl~t 221 (767)
.....++|+|||++++++.. +.|.+ +|+.+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 34567999999999998873 34888 88876
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.76 E-value=0.019 Score=63.52 Aligned_cols=142 Identities=11% Similarity=0.172 Sum_probs=87.9
Q ss_pred CCeEEEEECC-CCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCc-EEEEEeCCC----eEEEEECCC
Q 004217 108 RSTIAAAFSP-DGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPT-IIASGSLDH----EVRLWNAST 181 (767)
Q Consensus 108 ~sVtsVaFSp-DG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~-lLaSgS~DG----tVrIWDl~t 181 (767)
.....|+|+| ++..|+.+...+.|+++|++++.... +.........|+|++ +++ ++++...++ .+..++ ..
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~-~~ 213 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILT-RE 213 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEE-GG
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEe-CC
Confidence 3567899998 46667666665889999998776444 333456688999999 777 555443222 233333 33
Q ss_pred CeEE--EeecCCCCeEEEEEcC-CCCEEEEEE-CCcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 182 AECI--GSRDFYRPIASIAFHA-SGELLAVAS-GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 182 g~~i--~~l~h~~~VtsVafSP-dG~~LAsgS-dd~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
+... ..+........++++| +|.++++-. .++|+.+|........ ..........+.++|+|+|++|+++.
T Consensus 214 g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~--~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 214 SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTP--LFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEE--EEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEE--EEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 3221 2222234456788999 666555443 3559999988654311 11122234578999999999766654
No 270
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.76 E-value=0.068 Score=55.48 Aligned_cols=180 Identities=12% Similarity=-0.034 Sum_probs=101.2
Q ss_pred eEEEEEEcCCCEEEEEeC-CC-eEEEEeCCCCCCC-----CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeE-EE
Q 004217 72 QIFEAGRDARRGLASWVE-AE-SLHHLRPKYCPLS-----PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC-LK 143 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~-Dg-sIrlWd~~t~~L~-----gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~-l~ 143 (767)
+.-+++..+++.+++-.. ++ .|..++..++++. ........+++.+++..+++-..++.|.++|..+++. +.
T Consensus 74 p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~ 153 (306)
T 2p4o_A 74 VSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIW 153 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEE
Confidence 334555556664444332 22 4555665554321 1223345566666555555555688999999876532 22
Q ss_pred EEcc---------CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCC-CeE--EEeecCCCCeEEEEEcCCCCEEEEEE-
Q 004217 144 VLHG---------HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAST-AEC--IGSRDFYRPIASIAFHASGELLAVAS- 210 (767)
Q Consensus 144 ~L~g---------H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~t-g~~--i~~l~h~~~VtsVafSPdG~~LAsgS- 210 (767)
...+ .-.....+ +|++..++++-...+.|..||+.. ++. ...+........++++++|+++++..
T Consensus 154 ~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~ 231 (306)
T 2p4o_A 154 LEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHI 231 (306)
T ss_dssp EECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBT
T ss_pred EECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCC
Confidence 1111 11234555 773345666667788999999875 322 11111123456789999998765554
Q ss_pred CCcEEEEEcCCCccccCCeEEecCCCCeEEEEEc---cCCCeEEEEEe
Q 004217 211 GHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFH---PHAAPLLLTAE 255 (767)
Q Consensus 211 dd~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFS---PDG~~LlaSgs 255 (767)
.++|.++|.. ++... ...........++++|. ||++.|+++..
T Consensus 232 ~~~V~~~~~~-G~~~~-~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 232 YNSVVRIAPD-RSTTI-IAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp TCCEEEECTT-CCEEE-EECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCeEEEECCC-CCEEE-EeecccccCCceEEEEecccCCCCEEEEECC
Confidence 4559999875 33211 00111223568999999 89887777664
No 271
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.73 E-value=0.076 Score=58.89 Aligned_cols=149 Identities=14% Similarity=0.105 Sum_probs=91.7
Q ss_pred eEEEEEEc--CCCEEEEEeCCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCeEEEEeCC---Ce-EEEEECCCCeE-
Q 004217 72 QIFEAGRD--ARRGLASWVEAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLASTHGD---HT-VKIIDCQTGSC- 141 (767)
Q Consensus 72 ~~~vA~sd--~g~~LaSgs~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~LASgs~D---Gt-VrVWDl~tg~~- 141 (767)
+.-+++.. +...|+.....+.|+.++...++ +.........++|+++|+++++.... .. +...+...+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~ 220 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTE 220 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeec
Confidence 44555654 24556555444889999987663 33445568999999999944443321 12 33333222211
Q ss_pred EEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe-e--cCCCCeEEEEEcCCCCEEEEEEC--CcEEE
Q 004217 142 LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS-R--DFYRPIASIAFHASGELLAVASG--HKLYI 216 (767)
Q Consensus 142 l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~-l--~h~~~VtsVafSPdG~~LAsgSd--d~V~V 216 (767)
...+. .......++++|.++.++++-..++.|+.+|..++..... + ........++|+|+|++|..+.. +.|+.
T Consensus 221 ~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~ 299 (433)
T 4hw6_A 221 RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYR 299 (433)
T ss_dssp EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEE
Confidence 11222 2344567889986677777766788999999987766222 2 22223357999999997777663 44999
Q ss_pred EEcCC
Q 004217 217 WRYNM 221 (767)
Q Consensus 217 WDl~t 221 (767)
+|+..
T Consensus 300 ~~~d~ 304 (433)
T 4hw6_A 300 VDYNR 304 (433)
T ss_dssp EEBCT
T ss_pred EeCCC
Confidence 88763
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.67 E-value=0.41 Score=50.18 Aligned_cols=178 Identities=9% Similarity=-0.029 Sum_probs=105.8
Q ss_pred eEEEEEEcCC-CEEEEEeCCCeEEEEeCCC----CC----CCCCCCCeEEEEECCCCCeE-EEEeCCCeEEEEECCCCeE
Q 004217 72 QIFEAGRDAR-RGLASWVEAESLHHLRPKY----CP----LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSC 141 (767)
Q Consensus 72 ~~~vA~sd~g-~~LaSgs~DgsIrlWd~~t----~~----L~gH~~sVtsVaFSpDG~~L-ASgs~DGtVrVWDl~tg~~ 141 (767)
+..+++...+ ...++-...+.|..++... .. +...-.....+++++.+..| ++-..++.|.++|++....
T Consensus 32 p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~ 111 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 111 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE
T ss_pred eEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCce
Confidence 4445555444 3444445567888888765 11 11222456789998755544 4546678999999875543
Q ss_pred EEEEccCCCCcEEEEEccCCCcEEEEEeCC-CeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEEC--CcEEEE
Q 004217 142 LKVLHGHRRTPWVVRFHPLNPTIIASGSLD-HEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG--HKLYIW 217 (767)
Q Consensus 142 l~~L~gH~~~V~sLafsP~dg~lLaSgS~D-GtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSd--d~V~VW 217 (767)
...+...-.....++++|.++.++++.... +.|...++......... ..-.....+++++++..|..+.. +.|..+
T Consensus 112 ~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~ 191 (316)
T 1ijq_A 112 KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSI 191 (316)
T ss_dssp EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEE
Confidence 333333445688999998555566665443 78888888643322222 23456789999998887777763 349999
Q ss_pred EcCCCccccCCeEEec--CCCCeEEEEEccCCCeEEEEE
Q 004217 218 RYNMREETSSPRIVLR--TRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 218 Dl~t~~~~~~~~~l~~--h~~~VtsVaFSPDG~~LlaSg 254 (767)
|+....... .... .......+++. +..++.+.
T Consensus 192 d~dg~~~~~---~~~~~~~~~~P~giav~--~~~ly~~d 225 (316)
T 1ijq_A 192 DVNGGNRKT---ILEDEKRLAHPFSLAVF--EDKVFWTD 225 (316)
T ss_dssp ETTSCSCEE---EEECTTTTSSEEEEEEE--TTEEEEEE
T ss_pred ecCCCceEE---EeecCCccCCcEEEEEE--CCEEEEEE
Confidence 987543211 1111 22345677774 34455543
No 273
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.66 E-value=0.1 Score=56.88 Aligned_cols=173 Identities=10% Similarity=0.099 Sum_probs=109.0
Q ss_pred CEEEEEeCCCeEEEEeCCCCCCCCCC-CCeEEEEECCC----CCe--EEEE--eC--CCeEEEEEC--CCCeEEEEEcc-
Q 004217 82 RGLASWVEAESLHHLRPKYCPLSPPP-RSTIAAAFSPD----GKT--LAST--HG--DHTVKIIDC--QTGSCLKVLHG- 147 (767)
Q Consensus 82 ~~LaSgs~DgsIrlWd~~t~~L~gH~-~sVtsVaFSpD----G~~--LASg--s~--DGtVrVWDl--~tg~~l~~L~g- 147 (767)
..++.-.+.+-+.+||+....+.... +.++.+..-|+ |+. |+.+ -. +++|.+|++ .+++ +..+..
T Consensus 41 s~ii~t~k~~gL~Vydl~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~ 119 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLDGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDP 119 (355)
T ss_dssp CEEEEEETTTEEEEEETTSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCT
T ss_pred cEEEEEcCCCCEEEEcCCCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeecccc
Confidence 34555556677888888444332222 56777776662 332 3333 33 578999977 3443 555522
Q ss_pred -----CC-CCcEEEEE--ccCCCc-EEEEEeCCCeEEEEECC-------CCeEEEeecCCCCeEEEEEcCCCCEEEEEEC
Q 004217 148 -----HR-RTPWVVRF--HPLNPT-IIASGSLDHEVRLWNAS-------TAECIGSRDFYRPIASIAFHASGELLAVASG 211 (767)
Q Consensus 148 -----H~-~~V~sLaf--sP~dg~-lLaSgS~DGtVrIWDl~-------tg~~i~~l~h~~~VtsVafSPdG~~LAsgSd 211 (767)
.. ..+..+++ +|..+. +++....+|.+..|++. +.+.++.+.....+..+..++....|+.+-.
T Consensus 120 ~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eE 199 (355)
T 3amr_A 120 DHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEE 199 (355)
T ss_dssp TSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEET
T ss_pred ccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecc
Confidence 12 56777888 674443 67778889999999883 3466777888889999999999899999987
Q ss_pred Cc-EEEEEcCCCc--cccCCeEE-ecC-CCCeEEEEE--ccCCC-eEEEEEe
Q 004217 212 HK-LYIWRYNMRE--ETSSPRIV-LRT-RRSLRAVHF--HPHAA-PLLLTAE 255 (767)
Q Consensus 212 d~-V~VWDl~t~~--~~~~~~~l-~~h-~~~VtsVaF--SPDG~-~LlaSgs 255 (767)
+. |..+|.+-.. ........ .++ ...+..|++ .++++ +|++++.
T Consensus 200 d~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 200 DEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ 251 (355)
T ss_dssp TTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG
T ss_pred cceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC
Confidence 65 7777755221 10100111 122 346888888 56666 7887775
No 274
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.61 E-value=0.15 Score=52.96 Aligned_cols=152 Identities=9% Similarity=0.111 Sum_probs=99.1
Q ss_pred CCCCCCCCeEEEEECCCCCeEE-EEeCCCeEEEEECCCCeEEEEEcc-CCCCcEEEEEccCCCcEEEEEeCCCeEEEEEC
Q 004217 102 PLSPPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHG-HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNA 179 (767)
Q Consensus 102 ~L~gH~~sVtsVaFSpDG~~LA-Sgs~DGtVrVWDl~tg~~l~~L~g-H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl 179 (767)
.+.+-...+..++|+|+++.|+ +...++.|...|.. ++.++.+.- -......|++.+ ++.++++.-.++.+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEc
Confidence 4566667899999999776555 46678899999988 887777632 224578899988 7777777667889999987
Q ss_pred CCCeE---EEee--c-----CCCCeEEEEEcCCCCEEEEEECCc-EEEEEcCCCccccCCeEEe-------cCCCCeEEE
Q 004217 180 STAEC---IGSR--D-----FYRPIASIAFHASGELLAVASGHK-LYIWRYNMREETSSPRIVL-------RTRRSLRAV 241 (767)
Q Consensus 180 ~tg~~---i~~l--~-----h~~~VtsVafSPdG~~LAsgSdd~-V~VWDl~t~~~~~~~~~l~-------~h~~~VtsV 241 (767)
..... +... . .+.....++|+|+++.|.++.+.. ..+|.++............ .+...+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 65442 1222 1 234568999999998777776433 4444443100000011111 123467899
Q ss_pred EEccCCCeEEEEEe
Q 004217 242 HFHPHAAPLLLTAE 255 (767)
Q Consensus 242 aFSPDG~~LlaSgs 255 (767)
+|+|....+++.+.
T Consensus 179 ~~dp~tg~lliLS~ 192 (255)
T 3qqz_A 179 EFNQQKNTLLVLSH 192 (255)
T ss_dssp EEETTTTEEEEEET
T ss_pred EEcCCCCeEEEEEC
Confidence 99998776666554
No 275
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.59 E-value=0.071 Score=56.58 Aligned_cols=163 Identities=10% Similarity=-0.031 Sum_probs=104.5
Q ss_pred CCCeEEEEeCCCCC-----CCCCCCCeEEEEECCCC-CeEEEEeCCCeEEEEECCCCeE-EEEEccCCCCcEEEEEccCC
Q 004217 89 EAESLHHLRPKYCP-----LSPPPRSTIAAAFSPDG-KTLASTHGDHTVKIIDCQTGSC-LKVLHGHRRTPWVVRFHPLN 161 (767)
Q Consensus 89 ~DgsIrlWd~~t~~-----L~gH~~sVtsVaFSpDG-~~LASgs~DGtVrVWDl~tg~~-l~~L~gH~~~V~sLafsP~d 161 (767)
....|+..++.... +......+.+++|++.+ .++.+-...+.|+.++...+.. ...+...-.....+++.+.+
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred ccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 45667777776542 01112346789999854 4445555678999999876632 12222223456788998756
Q ss_pred CcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEEC---CcEEEEEcCCCccccCCeEEecCCCC
Q 004217 162 PTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRS 237 (767)
Q Consensus 162 g~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSd---d~V~VWDl~t~~~~~~~~~l~~h~~~ 237 (767)
++++++-...+.|.++++......... ........++++|.+.+|+.+.. .+|...++....... .....-..
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~~~~~l~~ 167 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI---IINSEIYW 167 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE---EECSSCSC
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE---EEECCCCC
Confidence 777787777889999998764433333 34456789999998776666652 348888876543211 22223345
Q ss_pred eEEEEEccCCCeEEEEE
Q 004217 238 LRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 238 VtsVaFSPDG~~LlaSg 254 (767)
.+.|+|+|++..|..+-
T Consensus 168 Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp EEEEEEETTTTEEEEEE
T ss_pred ccEEEEeccCCEEEEEE
Confidence 68999999888777663
No 276
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.58 E-value=0.15 Score=60.10 Aligned_cols=173 Identities=4% Similarity=-0.071 Sum_probs=114.6
Q ss_pred EEEEcCCCEEEEEeCCCeEEEEeCCCCCCC-------------CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeE
Q 004217 75 EAGRDARRGLASWVEAESLHHLRPKYCPLS-------------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC 141 (767)
Q Consensus 75 vA~sd~g~~LaSgs~DgsIrlWd~~t~~L~-------------gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~ 141 (767)
....+....|+.|+.++-|..++.....+. -....|.++...++|++. .|+.++-|.+||..+++.
T Consensus 317 ~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~ 395 (781)
T 3v9f_A 317 YIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVA 395 (781)
T ss_dssp EEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEE
T ss_pred EEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeE
Confidence 334456667888988888888888754321 123569999999887654 566566688899876543
Q ss_pred EEEE---ccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec---CCCCeEEEEEcCCCCEEEEEECCcEE
Q 004217 142 LKVL---HGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHASGELLAVASGHKLY 215 (767)
Q Consensus 142 l~~L---~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~---h~~~VtsVafSPdG~~LAsgSdd~V~ 215 (767)
.... ......|.++...+ ++.+.+ |..++.+..+|..+++...... ....|.++..+++|++.+. +.++|.
T Consensus 396 ~~~~~~~~~~~~~v~~i~~d~-~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~~Gl~ 472 (781)
T 3v9f_A 396 IYNKENRELLSNSVLCSLKDS-EGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG-THAGVF 472 (781)
T ss_dssp ECC-----CCCSBEEEEEECT-TSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-ETTEEE
T ss_pred EEccCCCCCCCcceEEEEECC-CCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-ECCceE
Confidence 2111 12335688888876 555554 6666779999988776544321 3467999999888875554 457899
Q ss_pred EEEcCCCccccCCeEEecC-----CCCeEEEEEccCCCeEEEEE
Q 004217 216 IWRYNMREETSSPRIVLRT-----RRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 216 VWDl~t~~~~~~~~~l~~h-----~~~VtsVaFSPDG~~LlaSg 254 (767)
+||..+++... ..... ...|.++...++|...+.+.
T Consensus 473 ~~~~~~~~~~~---~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 513 (781)
T 3v9f_A 473 VIDLASKKVIH---HYDTSNSQLLENFVRSIAQDSEGRFWIGTF 513 (781)
T ss_dssp EEESSSSSCCE---EECTTTSSCSCSCEEEEEECTTCCEEEEES
T ss_pred EEeCCCCeEEe---cccCcccccccceeEEEEEcCCCCEEEEEc
Confidence 99987765322 11111 46799999999999666553
No 277
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.52 E-value=0.5 Score=54.73 Aligned_cols=106 Identities=8% Similarity=0.019 Sum_probs=71.0
Q ss_pred CCCEEEEEeCCC-----------eEEEEeCCCCCCC-------CCCCCeEEEEECCCCCeEEEEeC-CCeEEEEECCCCe
Q 004217 80 ARRGLASWVEAE-----------SLHHLRPKYCPLS-------PPPRSTIAAAFSPDGKTLASTHG-DHTVKIIDCQTGS 140 (767)
Q Consensus 80 ~g~~LaSgs~Dg-----------sIrlWd~~t~~L~-------gH~~sVtsVaFSpDG~~LASgs~-DGtVrVWDl~tg~ 140 (767)
+++.++.|+.+. .+.+||..+.+.. .+.....++++..++++++.|+. +..+.+||..+++
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 666666665432 5889999876422 23334556788899999999984 5689999998876
Q ss_pred EEEEEccCCC-CcEEEEEccCCCcEEEEEe-CC-----CeEEEEECCCCeEEE
Q 004217 141 CLKVLHGHRR-TPWVVRFHPLNPTIIASGS-LD-----HEVRLWNASTAECIG 186 (767)
Q Consensus 141 ~l~~L~gH~~-~V~sLafsP~dg~lLaSgS-~D-----GtVrIWDl~tg~~i~ 186 (767)
-...-..+.. .-.++...+ ++++++.|+ .+ ..+.+||..+.+...
T Consensus 277 W~~~~~~~~~R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~ 328 (656)
T 1k3i_A 277 WIPGPDMQVARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS 328 (656)
T ss_dssp EEECCCCSSCCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEEE
T ss_pred eeECCCCCccccccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCccee
Confidence 4332221222 223455666 788998888 44 579999999877554
No 278
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.50 E-value=0.16 Score=53.57 Aligned_cols=141 Identities=9% Similarity=0.036 Sum_probs=86.5
Q ss_pred CCCCCeEEEEECCCCCeEEEEeCCCeEEEEEC--CCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCC
Q 004217 105 PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDC--QTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTA 182 (767)
Q Consensus 105 gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl--~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg 182 (767)
++...+..+++.+++++++.+...+..+-+|- .+-+.+ -......+..+.+.+ ++.+++ ++.+|.+++++...+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~-~g~~~~-~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTP-DGRLWM-IVNGGKIAFSDPDNS 235 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECT-TSCEEE-EETTTEEEEEETTEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECC-CCCEEE-EeCCceEEEecCCCC
Confidence 45668999999999988877655444444442 222222 134456788899988 666554 456788887753334
Q ss_pred eEEEeec-----CCCCeEEEEEcCCCCEEEEEECCcEEEEEcCCCccccCCeEEe---cCCCCeEEEEEccCCCeEEEEE
Q 004217 183 ECIGSRD-----FYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVL---RTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 183 ~~i~~l~-----h~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t~~~~~~~~~l~---~h~~~VtsVaFSPDG~~LlaSg 254 (767)
+....+. ....+..+++.+++++++++.++.| ++..+.++... ... .....++++.|.+++. +++.+
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~---~~~~~~~~~~~~~~v~~~~~~~-~~~~G 310 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQ---QDVDVKKVPSNFYKILFFSPDQ-GFILG 310 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCE---ECGGGTTSSSCCCEEEEEETTE-EEEEC
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccE---EcCccCCCCCCeEEEEEECCCc-eEEEc
Confidence 4333222 2245889999998888888776666 44444444322 222 1245688999986665 44443
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.48 E-value=0.43 Score=52.10 Aligned_cols=178 Identities=8% Similarity=-0.040 Sum_probs=109.2
Q ss_pred eEEEEEEcCCCE-EEEEeCCCeEEEEeCCCC-------C-CCCCCCCeEEEEECCC-CCeEEEEeCCCeEEEEECCCCeE
Q 004217 72 QIFEAGRDARRG-LASWVEAESLHHLRPKYC-------P-LSPPPRSTIAAAFSPD-GKTLASTHGDHTVKIIDCQTGSC 141 (767)
Q Consensus 72 ~~~vA~sd~g~~-LaSgs~DgsIrlWd~~t~-------~-L~gH~~sVtsVaFSpD-G~~LASgs~DGtVrVWDl~tg~~ 141 (767)
...+++...... .++-...+.|+.+++... . +.........+++.+. +++.++-...+.|.+.|++....
T Consensus 114 ~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~ 193 (400)
T 3p5b_L 114 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 193 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE
T ss_pred ceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce
Confidence 555666544444 444456778888887641 1 1223456788999984 44455555678999999886654
Q ss_pred EEEEccCCCCcEEEEEccCCCcEEEEEeC-CCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEEC--CcEEEE
Q 004217 142 LKVLHGHRRTPWVVRFHPLNPTIIASGSL-DHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIW 217 (767)
Q Consensus 142 l~~L~gH~~~V~sLafsP~dg~lLaSgS~-DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSd--d~V~VW 217 (767)
...+...-.....|+++|.++.++++-.. .+.|...++.......... .-.....|++++++..|..+.. +.|..+
T Consensus 194 ~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~ 273 (400)
T 3p5b_L 194 KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSI 273 (400)
T ss_dssp EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEE
Confidence 44444444568899999955556665433 4788888887544333332 3356789999998888877763 349999
Q ss_pred EcCCCccccCCeEEec--CCCCeEEEEEccCCCeEEEEE
Q 004217 218 RYNMREETSSPRIVLR--TRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 218 Dl~t~~~~~~~~~l~~--h~~~VtsVaFSPDG~~LlaSg 254 (767)
|++...... .... .......|++ ++..++.+.
T Consensus 274 d~dG~~~~~---~~~~~~~l~~P~gl~v--~~~~lywtd 307 (400)
T 3p5b_L 274 DVNGGNRKT---ILEDEKRLAHPFSLAV--FEDKVFWTD 307 (400)
T ss_dssp ETTSCCCEE---EEECSSTTSSEEEEEE--ETTEEEEEE
T ss_pred eCCCCccEE---EEeCCCCCCCCEEEEE--eCCEEEEec
Confidence 987544321 2221 1234556666 344455553
No 280
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.30 E-value=0.078 Score=61.56 Aligned_cols=178 Identities=9% Similarity=-0.010 Sum_probs=104.4
Q ss_pred EEcCCCEEEEEe-CCCeEEEEeCCCCC---CC--CCCCCeEEEEECCCCCeEEEEe-CC-----CeEEEEECCCCeEEEE
Q 004217 77 GRDARRGLASWV-EAESLHHLRPKYCP---LS--PPPRSTIAAAFSPDGKTLASTH-GD-----HTVKIIDCQTGSCLKV 144 (767)
Q Consensus 77 ~sd~g~~LaSgs-~DgsIrlWd~~t~~---L~--gH~~sVtsVaFSpDG~~LASgs-~D-----GtVrVWDl~tg~~l~~ 144 (767)
+..+++.++.|. .+..+.+||..+.+ +. ...+.-.++++.+||++++.|+ .+ ..+.+||..+++-...
T Consensus 250 ~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 250 MDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp ECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred CCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 335666666665 55689999988752 11 1122334566667999999998 44 5699999987653321
Q ss_pred -------E-cc-------CCC-------------------------------------------------CcEEEEEccC
Q 004217 145 -------L-HG-------HRR-------------------------------------------------TPWVVRFHPL 160 (767)
Q Consensus 145 -------L-~g-------H~~-------------------------------------------------~V~sLafsP~ 160 (767)
+ .. +.. .-.++.|...
T Consensus 330 ~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~ 409 (656)
T 1k3i_A 330 PNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAV 409 (656)
T ss_dssp TTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETT
T ss_pred CCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCC
Confidence 0 00 000 1122333233
Q ss_pred CCcEEEEEeCCC-----------eEEEEECCCCeEEEee----cCCCCeEEEEEcCCCCEEEEEEC------------Cc
Q 004217 161 NPTIIASGSLDH-----------EVRLWNASTAECIGSR----DFYRPIASIAFHASGELLAVASG------------HK 213 (767)
Q Consensus 161 dg~lLaSgS~DG-----------tVrIWDl~tg~~i~~l----~h~~~VtsVafSPdG~~LAsgSd------------d~ 213 (767)
++++++.|+.++ .|.+||..+.+..... .....-.+++..|+|++++.|+. ..
T Consensus 410 ~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~ 489 (656)
T 1k3i_A 410 KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFT 489 (656)
T ss_dssp TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCC
T ss_pred CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccc
Confidence 677888887543 6888888877655443 22222345567789999998873 23
Q ss_pred EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 214 LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 214 V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
+.+||..+.+-.. .......+.......+.|||+.+++++.
T Consensus 490 v~~ydp~t~~W~~-~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 490 PEIYVPEQDTFYK-QNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CEEEEGGGTEEEE-CCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred eEEEcCCCCceee-cCCCCCccccccHhhcCCCcEEEecCCC
Confidence 8999987654211 1111112233345567799996666554
No 281
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.25 E-value=0.95 Score=47.78 Aligned_cols=177 Identities=8% Similarity=-0.104 Sum_probs=106.1
Q ss_pred eEEEEEEc-CCCEEEEEeCCCeEEEEeCCCCCC-----CCCCCCeEEEEECCCC-CeEEEEeCCCeEEEEECCCCeEEEE
Q 004217 72 QIFEAGRD-ARRGLASWVEAESLHHLRPKYCPL-----SPPPRSTIAAAFSPDG-KTLASTHGDHTVKIIDCQTGSCLKV 144 (767)
Q Consensus 72 ~~~vA~sd-~g~~LaSgs~DgsIrlWd~~t~~L-----~gH~~sVtsVaFSpDG-~~LASgs~DGtVrVWDl~tg~~l~~ 144 (767)
...+.+.. ++...++-...+.|..++...... ...-.....+++.+.+ +++++-...+.|.+++++.......
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l 116 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVL 116 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEE
Confidence 33444443 344445555677888888765421 1122356678998744 4445555678999999875443333
Q ss_pred EccCCCCcEEEEEccCCCcEEEEEe-CCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEEC--CcEEEEEcC
Q 004217 145 LHGHRRTPWVVRFHPLNPTIIASGS-LDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG--HKLYIWRYN 220 (767)
Q Consensus 145 L~gH~~~V~sLafsP~dg~lLaSgS-~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSd--d~V~VWDl~ 220 (767)
+.........++++|.++.++++-. ..+.|...++......... ..-...+.++|++++..|..+.. +.|..+|+.
T Consensus 117 ~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 117 FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp ECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 3344566789999984455555542 3578888887643332222 22345689999998887777763 449999987
Q ss_pred CCccccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 004217 221 MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 221 t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaS 253 (767)
...... ...........+++. +..++.+
T Consensus 197 G~~~~~---~~~~~~~~P~glav~--~~~lywt 224 (318)
T 3sov_A 197 GTNRQA---VVKGSLPHPFALTLF--EDILYWT 224 (318)
T ss_dssp SCSCEE---EECSCCSCEEEEEEE--TTEEEEE
T ss_pred CCceEE---EecCCCCCceEEEEe--CCEEEEE
Confidence 543211 222234455677774 3345544
No 282
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.21 E-value=1 Score=46.64 Aligned_cols=175 Identities=10% Similarity=0.062 Sum_probs=99.8
Q ss_pred EEEcCCCEEE-EEeCCCeEEEEeCCCC-----CCCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeE---EEEEc
Q 004217 76 AGRDARRGLA-SWVEAESLHHLRPKYC-----PLSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC---LKVLH 146 (767)
Q Consensus 76 A~sd~g~~La-Sgs~DgsIrlWd~~t~-----~L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~---l~~L~ 146 (767)
+...++..|+ ...+++.|...|.... .+.+ ....-.|++.+++.++++.-.++.+.++++..... +....
T Consensus 33 a~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~ 111 (255)
T 3qqz_A 33 TWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDF-VKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIK 111 (255)
T ss_dssp EEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSS-CSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCC-CCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeec
Confidence 3333334343 3455666666666522 1222 25678899999888767665678899998865432 22221
Q ss_pred ------cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECC---CCeEEEee--------cCCCCeEEEEEcCCCCEEEEE
Q 004217 147 ------GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS---TAECIGSR--------DFYRPIASIAFHASGELLAVA 209 (767)
Q Consensus 147 ------gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~---tg~~i~~l--------~h~~~VtsVafSPdG~~LAsg 209 (767)
........++|+| .++.|+.+.......||.+. ....+..+ .+...+..++++|....|.+-
T Consensus 112 ~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliL 190 (255)
T 3qqz_A 112 IPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVL 190 (255)
T ss_dssp CCCSSCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEE
T ss_pred cccccccccCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEE
Confidence 1234568999999 55444444444344444443 11111111 123457899999987766666
Q ss_pred ECC-c-EEEEEcCCCccccCCeEEec-C------CCCeEEEEEccCCCeEEEEEe
Q 004217 210 SGH-K-LYIWRYNMREETSSPRIVLR-T------RRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 210 Sdd-~-V~VWDl~t~~~~~~~~~l~~-h------~~~VtsVaFSPDG~~LlaSgs 255 (767)
++. + |.++|.... .+. ...+.. . -..-..|+|.++|+ |.++++
T Consensus 191 S~~s~~L~~~d~~g~-~~~-~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE 242 (255)
T 3qqz_A 191 SHESRALQEVTLVGE-VIG-EMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSE 242 (255)
T ss_dssp ETTTTEEEEECTTCC-EEE-EEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEET
T ss_pred ECCCCeEEEEcCCCC-EEE-EEEcCCccCCcccccCCCCeeEECCCCC-EEEEcC
Confidence 643 3 888886644 322 112221 1 12567999999998 555554
No 283
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.19 E-value=0.6 Score=54.33 Aligned_cols=162 Identities=7% Similarity=-0.045 Sum_probs=109.4
Q ss_pred CCCeEEEEeCCCCCC-----CCCCCCeEEEEECCCCCeEE-EEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCC
Q 004217 89 EAESLHHLRPKYCPL-----SPPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNP 162 (767)
Q Consensus 89 ~DgsIrlWd~~t~~L-----~gH~~sVtsVaFSpDG~~LA-Sgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg 162 (767)
....|+..+++.... ...-..+..|+|++++..|+ +-..++.|+.++++.......+......+..+++.+.++
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 567788888875421 12335688999999655554 445678999999876544444443334677899987567
Q ss_pred cEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEEC---CcEEEEEcCCCccccCCeEEecCCCCe
Q 004217 163 TIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRSL 238 (767)
Q Consensus 163 ~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSd---d~V~VWDl~t~~~~~~~~~l~~h~~~V 238 (767)
+++++-...+.|.+.++........+ ..-.....|+++|...+|..+.. .+|...++...... .+...-...
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~----~l~~~~~~P 168 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT----TLVPNVGRA 168 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE----EEECSCSSE
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE----EEECCCCCc
Confidence 77788777889999998765433323 33456789999997666666652 34888887755432 233345678
Q ss_pred EEEEEccCCCeEEEEE
Q 004217 239 RAVHFHPHAAPLLLTA 254 (767)
Q Consensus 239 tsVaFSPDG~~LlaSg 254 (767)
+.|+++++++.|..+-
T Consensus 169 ~GlalD~~~~~LY~aD 184 (628)
T 4a0p_A 169 NGLTIDYAKRRLYWTD 184 (628)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred ceEEEccccCEEEEEE
Confidence 8999999888777664
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.16 E-value=0.51 Score=56.55 Aligned_cols=178 Identities=9% Similarity=-0.030 Sum_probs=108.4
Q ss_pred eEEEEEEcC-CCEEEEEeCCCeEEEEeCCCC-------C-CCCCCCCeEEEEECCCCCeEE-EEeCCCeEEEEECCCCeE
Q 004217 72 QIFEAGRDA-RRGLASWVEAESLHHLRPKYC-------P-LSPPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSC 141 (767)
Q Consensus 72 ~~~vA~sd~-g~~LaSgs~DgsIrlWd~~t~-------~-L~gH~~sVtsVaFSpDG~~LA-Sgs~DGtVrVWDl~tg~~ 141 (767)
...+++... +...++-...+.|+.+++... . +.........|++.+.++.|+ +-...+.|.+.+++....
T Consensus 426 ~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~ 505 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 505 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE
T ss_pred eEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE
Confidence 444555543 344445556677888887642 1 122345567899998765554 445678999999886554
Q ss_pred EEEEccCCCCcEEEEEccCCCcEEEEEeCC-CeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEEC--CcEEEE
Q 004217 142 LKVLHGHRRTPWVVRFHPLNPTIIASGSLD-HEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASG--HKLYIW 217 (767)
Q Consensus 142 l~~L~gH~~~V~sLafsP~dg~lLaSgS~D-GtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSd--d~V~VW 217 (767)
...+...-.....|+++|.++.++++-..+ +.|...++........+. .-.....|++++.+..|+.+.. +.|..+
T Consensus 506 ~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~ 585 (791)
T 3m0c_C 506 KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSI 585 (791)
T ss_dssp EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEE
Confidence 444444445688999999556666665333 789998987554443333 3357889999988887777763 349999
Q ss_pred EcCCCccccCCeEEecC--CCCeEEEEEccCCCeEEEEE
Q 004217 218 RYNMREETSSPRIVLRT--RRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 218 Dl~t~~~~~~~~~l~~h--~~~VtsVaFSPDG~~LlaSg 254 (767)
|+....... ..... -....+|++ ++.+|+.+-
T Consensus 586 d~dG~~~~~---v~~~~~~l~~P~glav--~~~~lYwtD 619 (791)
T 3m0c_C 586 DVNGGNRKT---ILEDEKRLAHPFSLAV--FEDKVFWTD 619 (791)
T ss_dssp ETTSCSCEE---EEECTTTTSSEEEEEE--ETTEEEEEE
T ss_pred ecCCCceEE---EecCCCccCCCCEEEE--eCCEEEEEE
Confidence 987654322 22221 223446665 344565553
No 285
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.09 E-value=0.09 Score=56.75 Aligned_cols=142 Identities=11% Similarity=0.093 Sum_probs=91.5
Q ss_pred eEEEEECCCCCeEEEEe-CCCeEEEEECCCCeEEEE-Ecc----CC--CCcEEEEE---ccCCCcEEEEEe---------
Q 004217 110 TIAAAFSPDGKTLASTH-GDHTVKIIDCQTGSCLKV-LHG----HR--RTPWVVRF---HPLNPTIIASGS--------- 169 (767)
Q Consensus 110 VtsVaFSpDG~~LASgs-~DGtVrVWDl~tg~~l~~-L~g----H~--~~V~sLaf---sP~dg~lLaSgS--------- 169 (767)
-.+++|.+....|..++ ..++|..||...+..... +.+ .. ..+..|.| .| ++++++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETTTTCTTS
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEcccccccccc
Confidence 45788988555555554 799999999986654333 222 11 13578999 68 677777543
Q ss_pred ----CCCeEEEEECC---CCeEEEeecC--------------CCCeEEEEEcCCCCEEEEEECC--cEEEEEcCCCcccc
Q 004217 170 ----LDHEVRLWNAS---TAECIGSRDF--------------YRPIASIAFHASGELLAVASGH--KLYIWRYNMREETS 226 (767)
Q Consensus 170 ----~DGtVrIWDl~---tg~~i~~l~h--------------~~~VtsVafSPdG~~LAsgSdd--~V~VWDl~t~~~~~ 226 (767)
.+..|..||+. +++.+..... ......++.+++|+..++++.. .|...+...... .
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~-~ 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV-S 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE-E
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE-e
Confidence 26789999999 7777655331 1247899999999987777744 466666554322 1
Q ss_pred CCeEEe----cCCCCeEEEEEccCCCeEEEEE
Q 004217 227 SPRIVL----RTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 227 ~~~~l~----~h~~~VtsVaFSPDG~~LlaSg 254 (767)
..... ......+.|+++|||+.|++..
T Consensus 173 -~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~ 203 (334)
T 2p9w_A 173 -TFAWESGNGGQRPGYSGITFDPHSNKLIAFG 203 (334)
T ss_dssp -EEEECCCCSSSCCSCSEEEEETTTTEEEEES
T ss_pred -eeeecCCCcccccCcceEEEeCCCCEEEEEc
Confidence 01111 1123467999999999777663
No 286
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.08 E-value=0.03 Score=66.05 Aligned_cols=163 Identities=10% Similarity=0.020 Sum_probs=99.5
Q ss_pred CCCeEEEEeCCCCC---CCCCCCCeEEEEECCCCCeEEEE-eCCCeEEEEECCC----CeEEEEEccCCCCcEEEEEccC
Q 004217 89 EAESLHHLRPKYCP---LSPPPRSTIAAAFSPDGKTLAST-HGDHTVKIIDCQT----GSCLKVLHGHRRTPWVVRFHPL 160 (767)
Q Consensus 89 ~DgsIrlWd~~t~~---L~gH~~sVtsVaFSpDG~~LASg-s~DGtVrVWDl~t----g~~l~~L~gH~~~V~sLafsP~ 160 (767)
....|+..++.... +......+..|+|++++..|+.+ ...+.|+.+++.+ ......+......+..|++.+.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 44567777776542 33334567789999876666555 4467899999875 2222222212234566888764
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEE-C--CcEEEEEcCCCccccCCeEEecCCC
Q 004217 161 NPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVAS-G--HKLYIWRYNMREETSSPRIVLRTRR 236 (767)
Q Consensus 161 dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgS-d--d~V~VWDl~t~~~~~~~~~l~~h~~ 236 (767)
+++++++-...+.|.++|+........+. .......|+++|.+.+|+.+. . ++|.++++....... .....-.
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~---l~~~~l~ 540 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTENIQ 540 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE---ESCSSCS
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE---EEeCCCC
Confidence 66777776677899999987655444333 234567889999766555544 2 348888776433211 1112234
Q ss_pred CeEEEEEccCCCeEEEEE
Q 004217 237 SLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 237 ~VtsVaFSPDG~~LlaSg 254 (767)
..+.|+|+|++..|..+-
T Consensus 541 ~PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVD 558 (699)
T ss_dssp SCCCEEECTTTCCEEEEE
T ss_pred CccEEEEeccCCEEEEEe
Confidence 567899999887777654
No 287
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.06 E-value=0.54 Score=50.72 Aligned_cols=178 Identities=9% Similarity=0.009 Sum_probs=108.2
Q ss_pred EEEEcCCCEEEEEe-CCCeEEEEeCCCCC-----CCC----CC--CCeEEEEE---CCCCCeEEEEe-------------
Q 004217 75 EAGRDARRGLASWV-EAESLHHLRPKYCP-----LSP----PP--RSTIAAAF---SPDGKTLASTH------------- 126 (767)
Q Consensus 75 vA~sd~g~~LaSgs-~DgsIrlWd~~t~~-----L~g----H~--~sVtsVaF---SpDG~~LASgs------------- 126 (767)
..+...+..++.++ ..++|..|+...+. +.+ .. ..+..|.| .++++++++..
T Consensus 18 ~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~ 97 (334)
T 2p9w_A 18 TIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSH 97 (334)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSS
T ss_pred ccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccC
Confidence 44444344444443 67888888876431 111 11 13589999 68887777543
Q ss_pred CCCeEEEEECC---CCeEEEEEc--cC-----------CCCcEEEEEccCCCcEEEEEeCC-CeEEEEECCCCeEEEee-
Q 004217 127 GDHTVKIIDCQ---TGSCLKVLH--GH-----------RRTPWVVRFHPLNPTIIASGSLD-HEVRLWNASTAECIGSR- 188 (767)
Q Consensus 127 ~DGtVrVWDl~---tg~~l~~L~--gH-----------~~~V~sLafsP~dg~lLaSgS~D-GtVrIWDl~tg~~i~~l- 188 (767)
.+..|..||+. +++.+.... .. ......++..+ +++..++++.. +.|...+..........
T Consensus 98 g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~ 176 (334)
T 2p9w_A 98 GASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGKTVSTFAW 176 (334)
T ss_dssp SCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSCCEEEEEE
T ss_pred CCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCCEEeeeee
Confidence 26789999999 777654432 11 12477899999 89999998888 88777776644322221
Q ss_pred cC-----CCCeEEEEEcCCCCEEEEEEC-CcEEEEEcCCCccccCCeEEe--cC---CCCeEEE-EEccCCCeEEEEEe
Q 004217 189 DF-----YRPIASIAFHASGELLAVASG-HKLYIWRYNMREETSSPRIVL--RT---RRSLRAV-HFHPHAAPLLLTAE 255 (767)
Q Consensus 189 ~h-----~~~VtsVafSPdG~~LAsgSd-d~V~VWDl~t~~~~~~~~~l~--~h---~~~VtsV-aFSPDG~~LlaSgs 255 (767)
.. ....+.|+++|+|+.|++... ++|..+|+++.... ..... +. -.....+ .--.+|+.++++..
T Consensus 177 ~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~--~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~ 253 (334)
T 2p9w_A 177 ESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAW--PEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR 253 (334)
T ss_dssp CCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCC--CEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE
T ss_pred cCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcce--eecccccCCcccccCcccccccccCCEEEEEEcC
Confidence 11 223678999999998777754 44999998843220 11111 21 1223443 33457887666654
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.91 E-value=0.17 Score=57.45 Aligned_cols=149 Identities=13% Similarity=0.054 Sum_probs=95.7
Q ss_pred eEEEEEEc--CCCEEEEEeCCCeEEEEeCCCCCCC---C----CCCCeEEEEE-------CCCCCeEEEEeCCC------
Q 004217 72 QIFEAGRD--ARRGLASWVEAESLHHLRPKYCPLS---P----PPRSTIAAAF-------SPDGKTLASTHGDH------ 129 (767)
Q Consensus 72 ~~~vA~sd--~g~~LaSgs~DgsIrlWd~~t~~L~---g----H~~sVtsVaF-------SpDG~~LASgs~DG------ 129 (767)
+..+++.. ++...++....+.|++.|.+.+.+. . .......|+| +++|++|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 55667764 3444455555577999998876322 1 2235899999 99999777665543
Q ss_pred -eEEEEECCC-CeEE-----EEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECC-------CCeE-----------
Q 004217 130 -TVKIIDCQT-GSCL-----KVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS-------TAEC----------- 184 (767)
Q Consensus 130 -tVrVWDl~t-g~~l-----~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~-------tg~~----------- 184 (767)
.|.+++... +... ..+... .....++++|.++.++++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 366666443 2221 222211 2346788999677778888888999999987 5543
Q ss_pred ---EEeecCCCCeEEEEEcCCCCEEEEEEC--CcEEEEEcCC
Q 004217 185 ---IGSRDFYRPIASIAFHASGELLAVASG--HKLYIWRYNM 221 (767)
Q Consensus 185 ---i~~l~h~~~VtsVafSPdG~~LAsgSd--d~V~VWDl~t 221 (767)
+...........++|+|+|++|..+.. +.|+.+|...
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 122333445689999999997666653 4488877643
No 289
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.84 E-value=0.66 Score=50.36 Aligned_cols=161 Identities=11% Similarity=0.069 Sum_probs=97.7
Q ss_pred CCCeEEEEeCCCC--C-----CCC-----CCCCeEEEEECC--CCC-eEEEE-eC--CCeEEEEECCCC--e--EEEEEc
Q 004217 89 EAESLHHLRPKYC--P-----LSP-----PPRSTIAAAFSP--DGK-TLAST-HG--DHTVKIIDCQTG--S--CLKVLH 146 (767)
Q Consensus 89 ~DgsIrlWd~~t~--~-----L~g-----H~~sVtsVaFSp--DG~-~LASg-s~--DGtVrVWDl~tg--~--~l~~L~ 146 (767)
.+|.|.++|.++. + +.+ ..-....+.+.+ +++ +|+.+ .. +.+|.||+++.+ . .+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6888999998742 1 112 223567777765 454 34444 33 467888877543 2 234444
Q ss_pred cCC-CCcEEEEEccCCCcEEEEEeC-----------------CCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEE
Q 004217 147 GHR-RTPWVVRFHPLNPTIIASGSL-----------------DHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAV 208 (767)
Q Consensus 147 gH~-~~V~sLafsP~dg~lLaSgS~-----------------DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAs 208 (767)
+.. ...+.+.+.+ ++.++++... .+.|.-+|. ++.......-...+.++|+||++.|.+
T Consensus 161 g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEE
Confidence 432 3578899999 8888877641 244555554 333333333455789999999998888
Q ss_pred EEC--CcEEEEEcCCCccccCCeEEecCCCCeEEEEEcc-CCCeEEEE
Q 004217 209 ASG--HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHP-HAAPLLLT 253 (767)
Q Consensus 209 gSd--d~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSP-DG~~LlaS 253 (767)
+.. ++|+.||+.....+.....+ ........+++.+ +|+.++++
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred EeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 773 45999998743222211222 3356678899999 59855544
No 290
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.82 E-value=0.063 Score=62.87 Aligned_cols=145 Identities=13% Similarity=0.068 Sum_probs=92.3
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC----C-CCCCeEEEEECC--CCCeEEEEeC------CCeEEEEECCCCeEEEEEcc
Q 004217 81 RRGLASWVEAESLHHLRPKYCPLS----P-PPRSTIAAAFSP--DGKTLASTHG------DHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 81 g~~LaSgs~DgsIrlWd~~t~~L~----g-H~~sVtsVaFSp--DG~~LASgs~------DGtVrVWDl~tg~~l~~L~g 147 (767)
+..|+.++.|+.|..+|.+++++. . .......+..+| .+..++.+.. ++.|..+|.++|+.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 456777888999999998887421 1 100000111112 1334555443 58999999999999887752
Q ss_pred CC---C----------------------------CcEEEEEccCCCcEEEEEeCCC-------------------eEEEE
Q 004217 148 HR---R----------------------------TPWVVRFHPLNPTIIASGSLDH-------------------EVRLW 177 (767)
Q Consensus 148 H~---~----------------------------~V~sLafsP~dg~lLaSgS~DG-------------------tVrIW 177 (767)
.. . ....+++.| +.++++.+..++ .|..+
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 11 0 012467888 667787777665 49999
Q ss_pred ECCCCeEEEeecC---C-------CCeEEEEEcCCCC---EEEEEECCc-EEEEEcCCCcccc
Q 004217 178 NASTAECIGSRDF---Y-------RPIASIAFHASGE---LLAVASGHK-LYIWRYNMREETS 226 (767)
Q Consensus 178 Dl~tg~~i~~l~h---~-------~~VtsVafSPdG~---~LAsgSdd~-V~VWDl~t~~~~~ 226 (767)
|.++++.+..+.. . .+.....+..+|+ .|+.++.++ ++++|..+++.+.
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~ 338 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLIS 338 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEec
Confidence 9999999887642 1 2333333334675 577776555 9999999998754
No 291
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.72 E-value=0.046 Score=63.08 Aligned_cols=82 Identities=17% Similarity=0.255 Sum_probs=57.7
Q ss_pred CCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeE--EEEEcCCCC-
Q 004217 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIA--SIAFHASGE- 204 (767)
Q Consensus 128 DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~Vt--sVafSPdG~- 204 (767)
+|.|..||+.+|+.+.+..... .+..-.... .+.+++.++.|+.++.||.++++.+..+.....+. -+.|..+|+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~t-agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEe-CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 5889999999999887765432 222111122 35678889999999999999999999876544443 366777887
Q ss_pred EEEEEEC
Q 004217 205 LLAVASG 211 (767)
Q Consensus 205 ~LAsgSd 211 (767)
|+++.+.
T Consensus 543 Yv~~~~G 549 (582)
T 1flg_A 543 YLGVTVG 549 (582)
T ss_dssp EEEEEEC
T ss_pred EEEEEcc
Confidence 5655554
No 292
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.71 E-value=0.11 Score=57.52 Aligned_cols=144 Identities=13% Similarity=0.067 Sum_probs=85.2
Q ss_pred CCeEEEEECCC--CCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCC---Ce-EEEEECCC
Q 004217 108 RSTIAAAFSPD--GKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLD---HE-VRLWNAST 181 (767)
Q Consensus 108 ~sVtsVaFSpD--G~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~D---Gt-VrIWDl~t 181 (767)
.....|+|+++ ...|+.+...+.|+.+|..+++... +.........++|++ +++++++.... .. +...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEECCC
Confidence 45678999985 4456555554899999998887544 444455688999999 77766654422 22 33333221
Q ss_pred CeE-EEeecCCCCeEEEEEcC-CCCEEEEEEC-CcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 182 AEC-IGSRDFYRPIASIAFHA-SGELLAVASG-HKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 182 g~~-i~~l~h~~~VtsVafSP-dG~~LAsgSd-d~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
+.. ...+........++++| +|.+.++-.. +.|+.+|..++..... ....+....-..++|+|+|++|.++.
T Consensus 217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~-~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEE-EVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEE-EEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEE-EeccCCCCCcccEEEeCCCCEEEEEe
Confidence 111 01122234456788999 6665544433 4499999876654120 11111223345799999999666654
No 293
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.63 E-value=0.03 Score=64.40 Aligned_cols=81 Identities=9% Similarity=0.074 Sum_probs=55.1
Q ss_pred CCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCe--EEEEEcCCCCE
Q 004217 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPI--ASIAFHASGEL 205 (767)
Q Consensus 128 DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~V--tsVafSPdG~~ 205 (767)
++.|..||..+++.+.++... ..+....+.. .+.+++.++.|+.|+.||.++++.+..+.....+ ..+.+..+|+.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~ 520 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ 520 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCeEEEEECCCCCEEEEecCC-CCccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEE
Confidence 578999999999988777533 2232222233 3566777899999999999999999887643332 22445678875
Q ss_pred EEEEE
Q 004217 206 LAVAS 210 (767)
Q Consensus 206 LAsgS 210 (767)
++...
T Consensus 521 yv~~~ 525 (571)
T 2ad6_A 521 YIGSM 525 (571)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.56 E-value=0.93 Score=52.61 Aligned_cols=164 Identities=9% Similarity=-0.024 Sum_probs=103.9
Q ss_pred eCCCeEEEEeCCCCC-----CCCCCCCeEEEEECCCCCeEEEEe-CCCeEEEEECCCCeE-EEEEccCCCCcEEEEEccC
Q 004217 88 VEAESLHHLRPKYCP-----LSPPPRSTIAAAFSPDGKTLASTH-GDHTVKIIDCQTGSC-LKVLHGHRRTPWVVRFHPL 160 (767)
Q Consensus 88 s~DgsIrlWd~~t~~-----L~gH~~sVtsVaFSpDG~~LASgs-~DGtVrVWDl~tg~~-l~~L~gH~~~V~sLafsP~ 160 (767)
.+.+.|+..++.... +...-....+++|++.+..|+.+. ..+.|..++++.... ...+...-..+..+++.+.
T Consensus 15 ~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 15 ANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 94 (619)
T ss_dssp ECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETT
T ss_pred eccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEec
Confidence 346667777775431 223455688999999666665554 467899999876532 2333333356889999986
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEEC---CcEEEEEcCCCccccCCeEEecCCC
Q 004217 161 NPTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRR 236 (767)
Q Consensus 161 dg~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSd---d~V~VWDl~t~~~~~~~~~l~~h~~ 236 (767)
+++++++-...+.|.+.|+......... ..-.....|+++|.+.+|+.+.. .+|...++....... .....-.
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~---l~~~~~~ 171 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI---IINSEIY 171 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---EECSSCS
T ss_pred CCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEE---EEeCCCC
Confidence 6777777778899999999765443333 33455678999998766666653 237777766543211 2223345
Q ss_pred CeEEEEEccCCCeEEEEE
Q 004217 237 SLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 237 ~VtsVaFSPDG~~LlaSg 254 (767)
..+.|++++++..|..+-
T Consensus 172 ~P~Glald~~~~~LY~aD 189 (619)
T 3s94_A 172 WPNGLTLDYEEQKLYWAD 189 (619)
T ss_dssp SEEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEccCCEEEEEe
Confidence 678999999887776663
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.45 E-value=0.22 Score=56.60 Aligned_cols=145 Identities=10% Similarity=0.061 Sum_probs=86.4
Q ss_pred CeEEEEECC-CCCeEEEEeC-CCeEEEEECCCCeEEEEEccC---CCCcEEEEE-------ccCCCcEEEEEeCCC----
Q 004217 109 STIAAAFSP-DGKTLASTHG-DHTVKIIDCQTGSCLKVLHGH---RRTPWVVRF-------HPLNPTIIASGSLDH---- 172 (767)
Q Consensus 109 sVtsVaFSp-DG~~LASgs~-DGtVrVWDl~tg~~l~~L~gH---~~~V~sLaf-------sP~dg~lLaSgS~DG---- 172 (767)
....|+|+| +...|+.+.. .+.|++.|++++.....+..- ......|+| ++ +++.|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCCCcc
Confidence 467899998 4555555544 467999999888765544332 224789999 99 677455544433
Q ss_pred ---eEEEEECCC-CeEE-----EeecCCCCeEEEEEcCCCCEEEEEE-C-CcEEEEEcC-------CCccc-----c---
Q 004217 173 ---EVRLWNAST-AECI-----GSRDFYRPIASIAFHASGELLAVAS-G-HKLYIWRYN-------MREET-----S--- 226 (767)
Q Consensus 173 ---tVrIWDl~t-g~~i-----~~l~h~~~VtsVafSPdG~~LAsgS-d-d~V~VWDl~-------t~~~~-----~--- 226 (767)
.|.+++... ++.. ..+........++++|++.+|..+. . +.|..+|+. ++... .
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266666433 2221 1222123445778999666555554 3 349999987 44430 0
Q ss_pred --CCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 227 --SPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 227 --~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
......+.....+.|+|+|+|++|.++-
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence 0011122344568999999999655553
No 296
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.40 E-value=1.9 Score=45.16 Aligned_cols=143 Identities=14% Similarity=0.108 Sum_probs=84.3
Q ss_pred CCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEE-EccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEEC--CCC
Q 004217 106 PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKV-LHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNA--STA 182 (767)
Q Consensus 106 H~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~-L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl--~tg 182 (767)
+...+..+.+.++++.++.+ .++.|.. ..+.|+.-.. ..++...+..+.+.+ ++.+++.+...+..+-+|- .+.
T Consensus 120 ~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~-~~~~~~~g~~G~~~~S~d~gG~tW 196 (327)
T 2xbg_A 120 LPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSP-SGEYVAVSSRGSFYSTWEPGQTAW 196 (327)
T ss_dssp CSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECT-TSCEEEEETTSSEEEEECTTCSSC
T ss_pred CCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcC-CCcEEEEECCCcEEEEeCCCCCce
Confidence 44568888888777766655 4554432 2233443332 245566788999999 7777776655444444553 333
Q ss_pred eEEEeecCCCCeEEEEEcCCCCEEEEEECCcEEEEEcCCCccccCCeEE-ecCCCCeEEEEEccCCCeEEE
Q 004217 183 ECIGSRDFYRPIASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIV-LRTRRSLRAVHFHPHAAPLLL 252 (767)
Q Consensus 183 ~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t~~~~~~~~~l-~~h~~~VtsVaFSPDG~~Lla 252 (767)
+.+. ......+..+++.+++++++++.++.+++.+.+.++.......- ..+...+.++.|.+++..+++
T Consensus 197 ~~~~-~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 266 (327)
T 2xbg_A 197 EPHN-RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLA 266 (327)
T ss_dssp EEEE-CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEE
T ss_pred eECC-CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEE
Confidence 3332 23456788999999998887766665777643323221111000 112346889999988774444
No 297
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.12 E-value=0.57 Score=50.96 Aligned_cols=129 Identities=14% Similarity=0.139 Sum_probs=89.8
Q ss_pred CCeEEEEeC--CCCCCC---C------CC-CCeEEEEE--CCC-CC-eEEEEeCCCeEEEEECC-------CCeEEEEEc
Q 004217 90 AESLHHLRP--KYCPLS---P------PP-RSTIAAAF--SPD-GK-TLASTHGDHTVKIIDCQ-------TGSCLKVLH 146 (767)
Q Consensus 90 DgsIrlWd~--~t~~L~---g------H~-~sVtsVaF--SpD-G~-~LASgs~DGtVrVWDl~-------tg~~l~~L~ 146 (767)
+++|.+|++ .+.++. . .. ..+..+++ +++ ++ +++....+|.+..|++. +.+.+++|.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 578888955 444321 1 11 56677888 774 54 57788889999999982 335667776
Q ss_pred cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECC-----CCeEEEeecC---CCCeEEEEE--cCCCC-EEEEEE--CCc
Q 004217 147 GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS-----TAECIGSRDF---YRPIASIAF--HASGE-LLAVAS--GHK 213 (767)
Q Consensus 147 gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~-----tg~~i~~l~h---~~~VtsVaf--SPdG~-~LAsgS--dd~ 213 (767)
- ...+..+...+ ....|+.+-+|..|..+|.+ +++.+..+.. ...+..|++ .++|+ +|++++ ++.
T Consensus 178 l-gsq~EgcvvDd-~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 178 M-NSQTEGMAADD-EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp C-SSCEEEEEEET-TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred C-CCCcceEEEcC-CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 4 45788899988 77888888898877777865 3556655532 246888887 56666 777777 345
Q ss_pred EEEEEcC
Q 004217 214 LYIWRYN 220 (767)
Q Consensus 214 V~VWDl~ 220 (767)
..+||..
T Consensus 256 ~~Vydr~ 262 (355)
T 3amr_A 256 YAIYDRQ 262 (355)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 9999986
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.02 E-value=3.2 Score=48.23 Aligned_cols=177 Identities=6% Similarity=-0.097 Sum_probs=112.0
Q ss_pred eEEEEEEcCCCE-EEEEeCCCeEEEEeCCCCC----CCCCCCCeEEEEECCCCCeE-EEEeCCCeEEEEECCCCeEEEEE
Q 004217 72 QIFEAGRDARRG-LASWVEAESLHHLRPKYCP----LSPPPRSTIAAAFSPDGKTL-ASTHGDHTVKIIDCQTGSCLKVL 145 (767)
Q Consensus 72 ~~~vA~sd~g~~-LaSgs~DgsIrlWd~~t~~----L~gH~~sVtsVaFSpDG~~L-ASgs~DGtVrVWDl~tg~~l~~L 145 (767)
+..+++...... .++-..++.|..+++.... +..-......+++...+..| ++-...+.|.+.+++.......+
T Consensus 39 ~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~ 118 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLV 118 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEE
T ss_pred eEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEE
Confidence 455666544444 4455567888888876532 11122457789998765555 44455788999998755433333
Q ss_pred ccCCCCcEEEEEccCCCcEEEEE-eCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEEC--CcEEEEEcCCC
Q 004217 146 HGHRRTPWVVRFHPLNPTIIASG-SLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASG--HKLYIWRYNMR 222 (767)
Q Consensus 146 ~gH~~~V~sLafsP~dg~lLaSg-S~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSd--d~V~VWDl~t~ 222 (767)
...-.....|+++|.++.++++- +..+.|...++...........-.....+++++++..|..+.. +.|..+|+...
T Consensus 119 ~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 119 WKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp CSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred eCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 34445678999999556666654 2356788888876554444445567889999999888877764 44999998765
Q ss_pred ccccCCeEEecCCCCeEEEEEccCCCeEEEEE
Q 004217 223 EETSSPRIVLRTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 223 ~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSg 254 (767)
.. . .+.........|++.. ..+..+.
T Consensus 199 ~~-~---v~~~~l~~P~glav~~--~~ly~tD 224 (628)
T 4a0p_A 199 NR-E---VIADDLPHPFGLTQYQ--DYIYWTD 224 (628)
T ss_dssp SC-E---EEEECCSCEEEEEEET--TEEEEEE
T ss_pred ce-E---EeeccCCCceEEEEEC--CEEEEec
Confidence 43 2 2333344556787764 3455553
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.00 E-value=0.56 Score=50.19 Aligned_cols=99 Identities=19% Similarity=0.216 Sum_probs=61.7
Q ss_pred CeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEE--EEEc---cCCCCcEEEEEccC---CCcEEEEEeCC-----CeEE
Q 004217 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCL--KVLH---GHRRTPWVVRFHPL---NPTIIASGSLD-----HEVR 175 (767)
Q Consensus 109 sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l--~~L~---gH~~~V~sLafsP~---dg~lLaSgS~D-----GtVr 175 (767)
.-..++|.|||+++++ ..++.|++++ +++.. ..+. ........|+|+|+ ++.++++-..+ +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4679999999985554 5679999998 45422 2121 12346789999993 25555554433 6788
Q ss_pred EEECCCCeE-----EEe-ecC----CCCeEEEEEcCCCCEEEEEE
Q 004217 176 LWNASTAEC-----IGS-RDF----YRPIASIAFHASGELLAVAS 210 (767)
Q Consensus 176 IWDl~tg~~-----i~~-l~h----~~~VtsVafSPdG~~LAsgS 210 (767)
.|+...+.. +.. +.. ......++|.|+|.+.++.+
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 888765421 111 221 12346899999997655543
No 300
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.93 E-value=1.3 Score=49.45 Aligned_cols=143 Identities=13% Similarity=0.102 Sum_probs=93.7
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC-C---CCC----CCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCe---
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC-P---LSP----PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGS--- 140 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~-~---L~g----H~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~--- 140 (767)
.++.....++..++.+. ++.||..++... . +.- --..|..+..||+|++||..+ +..|.|-.+..+.
T Consensus 23 ~R~~~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~ 100 (452)
T 3pbp_A 23 PRYIFSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNV 100 (452)
T ss_dssp CEEEEEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCC
T ss_pred CcEEEEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccC
Confidence 34445556777777664 578888877632 1 111 123678899999999999876 4689998886321
Q ss_pred ---------EEEEEcc------CCCCcEEEEEccCC--CcEEEEEeCCCeEEEEECCCCe--EEEee-------c---CC
Q 004217 141 ---------CLKVLHG------HRRTPWVVRFHPLN--PTIIASGSLDHEVRLWNASTAE--CIGSR-------D---FY 191 (767)
Q Consensus 141 ---------~l~~L~g------H~~~V~sLafsP~d--g~lLaSgS~DGtVrIWDl~tg~--~i~~l-------~---h~ 191 (767)
..+.+.- ....|..+.|||.. +..|++-..|++|++||+.... +. .+ + ..
T Consensus 101 ~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~ 179 (452)
T 3pbp_A 101 EDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARV 179 (452)
T ss_dssp CCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSC
T ss_pred cccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCccc
Confidence 1223321 24679999999953 3489999999999999998621 22 22 1 22
Q ss_pred CCeEEEEEcCCCCEEEEEE--CCc-EEEE
Q 004217 192 RPIASIAFHASGELLAVAS--GHK-LYIW 217 (767)
Q Consensus 192 ~~VtsVafSPdG~~LAsgS--dd~-V~VW 217 (767)
..|.+++|..++-.|...+ .++ |+-.
T Consensus 180 ~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 180 NDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 6788899988776555543 433 5443
No 301
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.85 E-value=3.5 Score=47.72 Aligned_cols=143 Identities=13% Similarity=0.123 Sum_probs=88.5
Q ss_pred CCEEEEEeC-CCeEEEEeC-CCCCC------CCCC---------CCeEEEEECCCCCe----EEEEeCCCeEEEEECCCC
Q 004217 81 RRGLASWVE-AESLHHLRP-KYCPL------SPPP---------RSTIAAAFSPDGKT----LASTHGDHTVKIIDCQTG 139 (767)
Q Consensus 81 g~~LaSgs~-DgsIrlWd~-~t~~L------~gH~---------~sVtsVaFSpDG~~----LASgs~DGtVrVWDl~tg 139 (767)
+..|+..+. ++.|.-+|. .+++. .... .....++++|++.. |+.++.|+.|.-+|.++|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 345555555 667777777 56531 1100 01123556544444 888889999999999999
Q ss_pred eEEEEEccCC----CCcE-EEEEccCCCcEEEEEe------CCCeEEEEECCCCeEEEeecCCCCe--------------
Q 004217 140 SCLKVLHGHR----RTPW-VVRFHPLNPTIIASGS------LDHEVRLWNASTAECIGSRDFYRPI-------------- 194 (767)
Q Consensus 140 ~~l~~L~gH~----~~V~-sLafsP~dg~lLaSgS------~DGtVrIWDl~tg~~i~~l~h~~~V-------------- 194 (767)
+.+....... ..+. ..... ++. ++.++ .++.|+.+|.++|+.+..+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~--~g~-V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV--KDK-VIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE--TTE-EEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CEEEeecCCCCCccceeecCCEEE--CCE-EEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 9887764321 0111 11121 344 44444 3899999999999998775432221
Q ss_pred -------------------------EEEEEcCCCCEEEEEECC-----------------cEEEEEcCCCcccc
Q 004217 195 -------------------------ASIAFHASGELLAVASGH-----------------KLYIWRYNMREETS 226 (767)
Q Consensus 195 -------------------------tsVafSPdG~~LAsgSdd-----------------~V~VWDl~t~~~~~ 226 (767)
..++++++..+|+.+..+ .|..+|.++++...
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W 292 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKF 292 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEE
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceee
Confidence 135677777777777642 59999999998755
No 302
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.67 E-value=0.91 Score=49.09 Aligned_cols=141 Identities=16% Similarity=0.119 Sum_probs=81.0
Q ss_pred CCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEE--EEE----ccCCCCcEEEEEccC---CCcEEEEEe--CCCeEEE
Q 004217 108 RSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCL--KVL----HGHRRTPWVVRFHPL---NPTIIASGS--LDHEVRL 176 (767)
Q Consensus 108 ~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l--~~L----~gH~~~V~sLafsP~---dg~lLaSgS--~DGtVrI 176 (767)
.....|+|.|||+++++--..|.|++++..+++.. ..+ .........|+|+|+ ++.++++-+ .++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 34689999999987776655899999987666532 222 122456789999993 344555422 4556666
Q ss_pred EECCCC----------eEEEe-ec--CCCCeEEEEEcCCCCEEEEEEC--------------CcEEEEEcCCCccc----
Q 004217 177 WNASTA----------ECIGS-RD--FYRPIASIAFHASGELLAVASG--------------HKLYIWRYNMREET---- 225 (767)
Q Consensus 177 WDl~tg----------~~i~~-l~--h~~~VtsVafSPdG~~LAsgSd--------------d~V~VWDl~t~~~~---- 225 (767)
|.+..+ +.+.. +. .......|+|.|||.+.++.++ ++|.-.+....-..
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 665541 11111 22 1223457999999986666442 23444444322000
Q ss_pred -cCCeEEecCCCCeEEEEEccCCCe
Q 004217 226 -SSPRIVLRTRRSLRAVHFHPHAAP 249 (767)
Q Consensus 226 -~~~~~l~~h~~~VtsVaFSPDG~~ 249 (767)
.......+|+ ....++|+|+|..
T Consensus 192 ~~~~i~a~G~R-Np~Gla~dp~G~L 215 (347)
T 3das_A 192 PGSPVYSYGHR-NVQGLAWDDKQRL 215 (347)
T ss_dssp TTCCEEEBCCS-BCCEEEECTTCCE
T ss_pred CCCeEEeeCCC-CcceEEECCCCCE
Confidence 0112233454 3468999998873
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.61 E-value=5.2 Score=46.34 Aligned_cols=162 Identities=6% Similarity=-0.039 Sum_probs=104.6
Q ss_pred CCCeEEEEeCCCCCC-----C-CCCCCeEEEEECCCCCeEE-EEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCC
Q 004217 89 EAESLHHLRPKYCPL-----S-PPPRSTIAAAFSPDGKTLA-STHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLN 161 (767)
Q Consensus 89 ~DgsIrlWd~~t~~L-----~-gH~~sVtsVaFSpDG~~LA-Sgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~d 161 (767)
..+.|+..++..... . ..-..+.+|+|++.+..|+ +-...+.|+.++.+.......+...-..+..+++.+.+
T Consensus 324 ~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~ 403 (619)
T 3s94_A 324 RRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVA 403 (619)
T ss_dssp ESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTT
T ss_pred cccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEeccc
Confidence 455677777765421 1 1234578999998555554 44457899999987654444444344567889998756
Q ss_pred CcEEEEEeCCCeEEEEECCCCeEEEee-cCCCCeEEEEEcCCCCEEEEEEC---CcEEEEEcCCCccccCCeEEecCCCC
Q 004217 162 PTIIASGSLDHEVRLWNASTAECIGSR-DFYRPIASIAFHASGELLAVASG---HKLYIWRYNMREETSSPRIVLRTRRS 237 (767)
Q Consensus 162 g~lLaSgS~DGtVrIWDl~tg~~i~~l-~h~~~VtsVafSPdG~~LAsgSd---d~V~VWDl~t~~~~~~~~~l~~h~~~ 237 (767)
++++++-+..+.|.+.++........+ ..-.....|+++|...+|..+.. .+|...+++...... .....-..
T Consensus 404 ~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~---l~~~~l~~ 480 (619)
T 3s94_A 404 RNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVV---LVNTSLGW 480 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---EECSSCSC
T ss_pred CcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEE---EEeCCCCC
Confidence 778888778899999998765432222 23456789999997555555542 347777766443211 22333457
Q ss_pred eEEEEEccCCCeEEEE
Q 004217 238 LRAVHFHPHAAPLLLT 253 (767)
Q Consensus 238 VtsVaFSPDG~~LlaS 253 (767)
.+.|++++++..|..+
T Consensus 481 P~GlalD~~~~~LY~a 496 (619)
T 3s94_A 481 PNGLALDYDEGKIYWG 496 (619)
T ss_dssp EEEEEEETTTTEEEEE
T ss_pred CeeeEEcccCCEEEEE
Confidence 7899999987767665
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.61 E-value=0.61 Score=50.07 Aligned_cols=100 Identities=14% Similarity=0.111 Sum_probs=61.6
Q ss_pred CeEEEEECCCCCeEEEEeCCCeEEEEECCCCe-EEEEEc---cCCCCcEEEEEccC---CCcEEEEEeC---C----CeE
Q 004217 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGS-CLKVLH---GHRRTPWVVRFHPL---NPTIIASGSL---D----HEV 174 (767)
Q Consensus 109 sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~-~l~~L~---gH~~~V~sLafsP~---dg~lLaSgS~---D----GtV 174 (767)
....++|.|||++++ +..++.|+++| .+++ .+..+. ........|+|+|+ ++.++++-+. + ..|
T Consensus 30 ~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 468999999998555 45669999997 4555 222221 12345789999993 3556555442 3 567
Q ss_pred EEEECCCC--e-----EEEe-ec--CCCCeEEEEEcCCCCEEEEEE
Q 004217 175 RLWNASTA--E-----CIGS-RD--FYRPIASIAFHASGELLAVAS 210 (767)
Q Consensus 175 rIWDl~tg--~-----~i~~-l~--h~~~VtsVafSPdG~~LAsgS 210 (767)
..|+.... . .+.. +. .......++|.|||.+.++.+
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 77877654 1 1111 22 112346799999998666543
No 305
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.29 E-value=0.61 Score=49.93 Aligned_cols=142 Identities=17% Similarity=0.066 Sum_probs=78.2
Q ss_pred CeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEc-------cCCCCcEEEEEccC---CCcEEEEEeC-------C
Q 004217 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH-------GHRRTPWVVRFHPL---NPTIIASGSL-------D 171 (767)
Q Consensus 109 sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~-------gH~~~V~sLafsP~---dg~lLaSgS~-------D 171 (767)
....|+|.|||+.|+.+..+|.|++++.. ++....+. ........|+|+|+ ++.++++-.. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 46789999999844455678999999853 43221111 12345689999994 3555555433 2
Q ss_pred CeEEEEECCCC--eE--EEe----ec----CCCCeEEEEEcCCCCEEEEEEC--------------CcEEEEEcCCCccc
Q 004217 172 HEVRLWNASTA--EC--IGS----RD----FYRPIASIAFHASGELLAVASG--------------HKLYIWRYNMREET 225 (767)
Q Consensus 172 GtVrIWDl~tg--~~--i~~----l~----h~~~VtsVafSPdG~~LAsgSd--------------d~V~VWDl~t~~~~ 225 (767)
..|..|++... +. ... +. .......++|.|||.+.++.++ ++|.-+|....-..
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35666666533 11 111 11 1122457999999975555433 23666665532100
Q ss_pred ----------cCCeEEecCCCCeEEEEEcc-CCCeEEEE
Q 004217 226 ----------SSPRIVLRTRRSLRAVHFHP-HAAPLLLT 253 (767)
Q Consensus 226 ----------~~~~~l~~h~~~VtsVaFSP-DG~~LlaS 253 (767)
.......++ .....++|+| +|+ |.++
T Consensus 178 ~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~-l~~~ 214 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNA-LWLN 214 (353)
T ss_dssp TCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTE-EEEE
T ss_pred CCCCcCCCCCCccEEEEcC-cCccceEEECCCCC-EEEE
Confidence 111122333 3467899999 555 4443
No 306
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.22 E-value=1.5 Score=48.86 Aligned_cols=102 Identities=14% Similarity=0.172 Sum_probs=61.6
Q ss_pred CeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEE--EEEcc------CCCCcEEEEEccC---CCcEEEEEeC-------
Q 004217 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCL--KVLHG------HRRTPWVVRFHPL---NPTIIASGSL------- 170 (767)
Q Consensus 109 sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l--~~L~g------H~~~V~sLafsP~---dg~lLaSgS~------- 170 (767)
....|+|.|||+++++-...+.|++++..+++.. ..+.. .......|+|+|+ ++.++++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 4679999999987776544457888886655432 22221 2345679999994 4555555442
Q ss_pred -----CCeEEEEECCCC--e-----EEEe-ec--CCCCeEEEEEcCCCCEEEEEE
Q 004217 171 -----DHEVRLWNASTA--E-----CIGS-RD--FYRPIASIAFHASGELLAVAS 210 (767)
Q Consensus 171 -----DGtVrIWDl~tg--~-----~i~~-l~--h~~~VtsVafSPdG~~LAsgS 210 (767)
...|.-|++..+ + .+.. +. .......|+|.|||.+.++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555655322 1 1111 22 123478899999998666554
No 307
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.62 E-value=14 Score=43.09 Aligned_cols=166 Identities=10% Similarity=0.005 Sum_probs=103.3
Q ss_pred EEcCCCEEEEEeCCCeEEEEeCCCCCCCC----CCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEc----c-
Q 004217 77 GRDARRGLASWVEAESLHHLRPKYCPLSP----PPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLH----G- 147 (767)
Q Consensus 77 ~sd~g~~LaSgs~DgsIrlWd~~t~~L~g----H~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~----g- 147 (767)
..+....|+.++.+| +..+|..+.++.. ....|.++... +| .|..++.+ -+..+|..+++.. .+. +
T Consensus 69 ~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~-~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l 143 (758)
T 3ott_A 69 VIIDNTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMALQ-GD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGL 143 (758)
T ss_dssp EEETTTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEEE-TT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCC
T ss_pred EEcCCCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEec-CC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCc
Confidence 345667888888665 7789987764432 23357777653 55 45556665 5788998776533 331 1
Q ss_pred CCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee-c-----CCCCeEEEEEcCCCCEEEEEECCcEEEEEcCC
Q 004217 148 HRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR-D-----FYRPIASIAFHASGELLAVASGHKLYIWRYNM 221 (767)
Q Consensus 148 H~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l-~-----h~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t 221 (767)
....|.++.... ++.+.+ +.. +-+..+|..+++..... . ....|.++..+.++..|..|.+++|..+|..+
T Consensus 144 ~~~~i~~i~~d~-~g~lWi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~~~ 220 (758)
T 3ott_A 144 PNNTIYSIIRTK-DNQIYV-GTY-NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYFPST 220 (758)
T ss_dssp SCSCEEEEEECT-TCCEEE-EET-TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEETTT
T ss_pred CCCeEEEEEEcC-CCCEEE-EeC-CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECCCCeEEcCCC
Confidence 134577887776 566655 344 45888898776643321 1 12348888888877755556556799999876
Q ss_pred CccccCCeEEecCCCCeEEEEEccCCCeEEEE
Q 004217 222 REETSSPRIVLRTRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 222 ~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaS 253 (767)
.+... ...-....|.++....+|...+.+
T Consensus 221 ~~~~~---~~~l~~~~i~~i~~d~~g~lWigT 249 (758)
T 3ott_A 221 GQIKQ---TEAFHNNSIKSLALDGNGDLLAGT 249 (758)
T ss_dssp TEEEE---EEEEEEEEEEEEEECTTCCEEEEE
T ss_pred CeEEe---ccCCCCCeEEEEEEcCCCCEEEEe
Confidence 54322 111123468899988888866655
No 308
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=92.32 E-value=0.14 Score=60.46 Aligned_cols=143 Identities=9% Similarity=-0.067 Sum_probs=83.4
Q ss_pred CCEEEEEeCCCeEEEEeCCCCC---C-CCCCCCeEEEEECCCCCeEEEEeC-C-CeEEEEECCCCeEEEEE-ccCCCCcE
Q 004217 81 RRGLASWVEAESLHHLRPKYCP---L-SPPPRSTIAAAFSPDGKTLASTHG-D-HTVKIIDCQTGSCLKVL-HGHRRTPW 153 (767)
Q Consensus 81 g~~LaSgs~DgsIrlWd~~t~~---L-~gH~~sVtsVaFSpDG~~LASgs~-D-GtVrVWDl~tg~~l~~L-~gH~~~V~ 153 (767)
+...++-...+.|.+++..... + .........|+++|++.+|+.+.. . +.|.++++.... ...+ ...-....
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPN 543 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCC
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCcc
Confidence 3334444456778888876542 1 122345678899996655554443 2 678887775432 2223 22234567
Q ss_pred EEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec---CCCCeEEEEEcCCCCEEEEEE--CCcEEEEEcCCCcccc
Q 004217 154 VVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD---FYRPIASIAFHASGELLAVAS--GHKLYIWRYNMREETS 226 (767)
Q Consensus 154 sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~---h~~~VtsVafSPdG~~LAsgS--dd~V~VWDl~t~~~~~ 226 (767)
.|+|+|.++.++++-...+.|..+|+........+. .......|++..+ .|+... .+.|..+|..+++...
T Consensus 544 Glavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEEEEE
T ss_pred EEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCCceE
Confidence 899999667777777778899999987533332222 1122344555443 444443 2449888877666433
No 309
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=92.15 E-value=4.1 Score=42.76 Aligned_cols=126 Identities=9% Similarity=-0.015 Sum_probs=75.3
Q ss_pred EEEECCCCCeEEEEeCC--------------CeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEe----CCCe
Q 004217 112 AAAFSPDGKTLASTHGD--------------HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGS----LDHE 173 (767)
Q Consensus 112 sVaFSpDG~~LASgs~D--------------GtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS----~DGt 173 (767)
+--|+++|++|+-+... ..|+..+++.++... +.. . ....|++ +++.|+-.. .+..
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~--~--~~~~~s~-~g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDP--D--PCIYASL-IGNYIYYLHYDTQTATS 130 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EEC--S--CEEEEEE-ETTEEEEEEESSSSCEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eec--C--CccEEEE-eCCEEEEEeecCCCCce
Confidence 34567889998877653 468888887665333 321 1 1236777 566666554 3445
Q ss_pred EEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECCc--EEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEE
Q 004217 174 VRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGHK--LYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLL 251 (767)
Q Consensus 174 VrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd~--V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~Ll 251 (767)
|..-++......+...+.. .+|+++|+.|+-.+++. |.+.++....... +.. .... ..++|++.+|+
T Consensus 131 Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~----l~~--~~~~-~~~~P~g~~iy 199 (302)
T 3s25_A 131 LYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL----FYD--CNCY-KPVVLDDTNVY 199 (302)
T ss_dssp EEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE----EEC--SCEE-EEEEEETTEEE
T ss_pred EEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE----EeC--CCcc-ceeeecCCEEE
Confidence 5555666444443333322 45688899888777533 8888887665322 222 2222 34669999887
Q ss_pred EEE
Q 004217 252 LTA 254 (767)
Q Consensus 252 aSg 254 (767)
.+.
T Consensus 200 ~t~ 202 (302)
T 3s25_A 200 YMD 202 (302)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 310
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.93 E-value=0.39 Score=49.20 Aligned_cols=138 Identities=14% Similarity=0.108 Sum_probs=81.7
Q ss_pred CeEEEEECCCCCeEEEEeCCCeEEEEECCCCeE------EEEEc--cCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECC
Q 004217 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSC------LKVLH--GHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNAS 180 (767)
Q Consensus 109 sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~------l~~L~--gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~ 180 (767)
.+.+++|+|+|.+.+. .+|.+.-.+..+... -..+- +-.. ...+.|.| ++.+.++ .||.|.-++-.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~-~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDP-NGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECT-TSCEEEE--ETTEEEEESCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECC-CCCEEEe--CCCEEEEeCCC
Confidence 6779999999986666 677777666544211 11221 1112 47889999 8888887 56999888764
Q ss_pred CCeEEEe------ec--CCCCeEEEEEcCCCCEEEEEECCcEEEEEcCCCcc---ccCCeEEe-cCCCCeEEEEEccCCC
Q 004217 181 TAECIGS------RD--FYRPIASIAFHASGELLAVASGHKLYIWRYNMREE---TSSPRIVL-RTRRSLRAVHFHPHAA 248 (767)
Q Consensus 181 tg~~i~~------l~--h~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t~~~---~~~~~~l~-~h~~~VtsVaFSPDG~ 248 (767)
+.....- +. -=..+..|.|+|+|.+.++. ++.++-+...+... ......+. ..-..-+-+.|.++|.
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 4221111 11 11467899999999999888 77654433222211 00011222 2223345577999998
Q ss_pred eEEEE
Q 004217 249 PLLLT 253 (767)
Q Consensus 249 ~LlaS 253 (767)
.+.+.
T Consensus 195 l~~v~ 199 (236)
T 1tl2_A 195 LFGVQ 199 (236)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 65554
No 311
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.29 E-value=9.2 Score=38.83 Aligned_cols=138 Identities=15% Similarity=0.098 Sum_probs=75.4
Q ss_pred CCCEEEEEeCC----CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEeCC------CeEEEEECCCCeEEE
Q 004217 80 ARRGLASWVEA----ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD------HTVKIIDCQTGSCLK 143 (767)
Q Consensus 80 ~g~~LaSgs~D----gsIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs~D------GtVrVWDl~tg~~l~ 143 (767)
++..++.|..+ ..+.++|..+.+ +........++.+ ++++++.|+.+ ..+.+||..+.+-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 44444444433 568888887752 2211122223333 67777888765 468999998876332
Q ss_pred E--EccCCCCcEEEEEccCCCcEEEEEeC---------CCeEEEEECCCCeEEEee--cCCCCeEEEEEcCCCCEEEEEE
Q 004217 144 V--LHGHRRTPWVVRFHPLNPTIIASGSL---------DHEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVAS 210 (767)
Q Consensus 144 ~--L~gH~~~V~sLafsP~dg~lLaSgS~---------DGtVrIWDl~tg~~i~~l--~h~~~VtsVafSPdG~~LAsgS 210 (767)
. +.........+.+ ++++++.|+. -..+.+||+.+.+....- .....-.+++.. ++++++.|+
T Consensus 133 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG 208 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA---NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGG 208 (306)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred CCCCcCCcceeEEEEE---CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeC
Confidence 2 1111111222222 5677777764 345889999987655442 222111222222 566666665
Q ss_pred C------CcEEEEEcCCCc
Q 004217 211 G------HKLYIWRYNMRE 223 (767)
Q Consensus 211 d------d~V~VWDl~t~~ 223 (767)
. +.+.+||+.+.+
T Consensus 209 ~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp EETTEEBCCEEEEETTTTE
T ss_pred CCCCCCCceEEEeeCCCCc
Confidence 2 238999988764
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=90.97 E-value=5.3 Score=43.20 Aligned_cols=140 Identities=9% Similarity=0.116 Sum_probs=80.0
Q ss_pred eEEEEECCCCCeEEEE------------eCCCeEEEEECCC--CeEE-EEEcc-----CCCCcEEEEEccC-CC--cEEE
Q 004217 110 TIAAAFSPDGKTLAST------------HGDHTVKIIDCQT--GSCL-KVLHG-----HRRTPWVVRFHPL-NP--TIIA 166 (767)
Q Consensus 110 VtsVaFSpDG~~LASg------------s~DGtVrVWDl~t--g~~l-~~L~g-----H~~~V~sLafsP~-dg--~lLa 166 (767)
.-+++..++|..++++ ..+|.|.++|.++ ++.. ..+.+ ..-....+.+.++ ++ .+++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 3445555655444443 2688999999873 3321 12232 2236777887662 23 2444
Q ss_pred EEeC--CCeEEEEECCCC--eE--EEeecC--CCCeEEEEEcCCCCEEEEEEC------------------CcEEEEEcC
Q 004217 167 SGSL--DHEVRLWNASTA--EC--IGSRDF--YRPIASIAFHASGELLAVASG------------------HKLYIWRYN 220 (767)
Q Consensus 167 SgS~--DGtVrIWDl~tg--~~--i~~l~h--~~~VtsVafSPdG~~LAsgSd------------------d~V~VWDl~ 220 (767)
.-.. +.+|.+|++... .. +..+.+ -...+.+++.++|++.++... +.|+.+|.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 4333 567888876643 22 222332 346789999999998877641 11444443
Q ss_pred CCccccCCeEEecCCCCeEEEEEccCCCeEEEEEe
Q 004217 221 MREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 221 t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
++ ...+...-..-+.++|+||+++|.++-.
T Consensus 211 -~~----~~~~~~~l~~pNGia~spDg~~lYvadt 240 (355)
T 3sre_A 211 -ND----VRVVAEGFDFANGINISPDGKYVYIAEL 240 (355)
T ss_dssp -TC----CEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred -Ce----EEEeecCCcccCcceECCCCCEEEEEeC
Confidence 32 1233333456789999999998877654
No 313
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=89.75 E-value=8.1 Score=43.12 Aligned_cols=131 Identities=14% Similarity=0.159 Sum_probs=80.9
Q ss_pred CCCCeEEEEeCCCeEEEEECCCCeEEEEEccC----CCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCe---------
Q 004217 117 PDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH----RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAE--------- 183 (767)
Q Consensus 117 pDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH----~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~--------- 183 (767)
.+|..|+.+- ++.||.-++..+..-+.++-. -..|..+..+| ++++|+..+ +.+|.|-.+..+.
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 3555555544 367887777644333444332 23688899999 889888875 5689998887322
Q ss_pred ---EEEee--c-----CCCCeEEEEEcCCCC---EEEEEE-CCcEEEEEcCCCccccCCeEEe---------cCCCCeEE
Q 004217 184 ---CIGSR--D-----FYRPIASIAFHASGE---LLAVAS-GHKLYIWRYNMREETSSPRIVL---------RTRRSLRA 240 (767)
Q Consensus 184 ---~i~~l--~-----h~~~VtsVafSPdG~---~LAsgS-dd~V~VWDl~t~~~~~~~~~l~---------~h~~~Vts 240 (767)
..+.+ + ...+|..+.|||-+. .|++-. ++.|++||+..... .+..+. .....|.+
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~--~P~~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQE--KPIVLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTS--CCEEESCCCSEEESCSSCCCEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCC--CCcchhccccccCCCcccceEEE
Confidence 11122 1 246799999999663 555555 55599999986332 111111 12256788
Q ss_pred EEEccCCCeEEE
Q 004217 241 VHFHPHAAPLLL 252 (767)
Q Consensus 241 VaFSPDG~~Lla 252 (767)
++|..++-.|.+
T Consensus 185 ~~Fg~~~lTLYv 196 (452)
T 3pbp_A 185 LEFSKDGLTLYC 196 (452)
T ss_dssp EEECTTSSCEEE
T ss_pred EEEcCCCcEEEE
Confidence 888886654443
No 314
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=89.46 E-value=10 Score=40.31 Aligned_cols=136 Identities=14% Similarity=0.053 Sum_probs=75.9
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC-CC------CCCCCCeEEEEECCC---CCeEEEEeC----C----CeEEE
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC-PL------SPPPRSTIAAAFSPD---GKTLASTHG----D----HTVKI 133 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~-~L------~gH~~sVtsVaFSpD---G~~LASgs~----D----GtVrV 133 (767)
+..+++..++. |+....++.|++++.... .+ .........|+|+|+ +..|..+.. + ..|..
T Consensus 31 P~~ia~~pdG~-l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r 109 (354)
T 3a9g_A 31 PWSIAPLGGGR-YLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIR 109 (354)
T ss_dssp EEEEEEEETTE-EEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEE
T ss_pred CeEEEEcCCCe-EEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEE
Confidence 45566656665 444455688888864321 11 112356899999997 555554433 3 56777
Q ss_pred EECCCC--e-----EE-EEEcc-CCCCcEEEEEccCCCcEEEEEeC-------------CCeEEEEECCCC---------
Q 004217 134 IDCQTG--S-----CL-KVLHG-HRRTPWVVRFHPLNPTIIASGSL-------------DHEVRLWNASTA--------- 182 (767)
Q Consensus 134 WDl~tg--~-----~l-~~L~g-H~~~V~sLafsP~dg~lLaSgS~-------------DGtVrIWDl~tg--------- 182 (767)
|+...+ . .+ ..+.. .......|.|.| ++.++++.+. .+.|.-+|....
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~ 188 (354)
T 3a9g_A 110 GRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPN 188 (354)
T ss_dssp EEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTT
T ss_pred EEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCC
Confidence 887654 1 11 11221 112346799999 8887777432 245655555421
Q ss_pred eEEEeecCCCCeEEEEEcC-CCCEEEEEE
Q 004217 183 ECIGSRDFYRPIASIAFHA-SGELLAVAS 210 (767)
Q Consensus 183 ~~i~~l~h~~~VtsVafSP-dG~~LAsgS 210 (767)
..+...++.. ...++|+| +|+++++-.
T Consensus 189 ~~i~a~G~rn-p~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 189 SPIWSYGHRN-PQGIDWHRASGVMVATEH 216 (354)
T ss_dssp CCEEEECCSC-CCEEEECTTTCCEEEEEC
T ss_pred CcEEEEccCC-cceEEEeCCCCCEEEEec
Confidence 1233333333 45799999 677655543
No 315
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=88.92 E-value=4.4 Score=43.08 Aligned_cols=102 Identities=13% Similarity=0.181 Sum_probs=61.4
Q ss_pred CCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEE--Eeec----CCCCeEEEEEcCC---CCEEEEEEC-------C
Q 004217 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECI--GSRD----FYRPIASIAFHAS---GELLAVASG-------H 212 (767)
Q Consensus 149 ~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i--~~l~----h~~~VtsVafSPd---G~~LAsgSd-------d 212 (767)
-...+.++|.| +++++++ ..++.|++++ +++.. ..+. .......|+|+|+ +..|.++.. +
T Consensus 30 l~~P~~ia~~p-dG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 30 LEVPWALAFLP-DGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CSCEEEEEECT-TSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCceEEEEcC-CCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 34578999999 7786665 5679999998 44422 1111 2356789999998 555554432 4
Q ss_pred cEEEEEcCCCccccCCeE---Ee---cCCCCeEEEEEccCCCeEEEEE
Q 004217 213 KLYIWRYNMREETSSPRI---VL---RTRRSLRAVHFHPHAAPLLLTA 254 (767)
Q Consensus 213 ~V~VWDl~t~~~~~~~~~---l~---~h~~~VtsVaFSPDG~~LlaSg 254 (767)
.|..|+............ +. ........++|.|||..+++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 588888764321110011 11 1112346899999997555444
No 316
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=88.67 E-value=35 Score=39.60 Aligned_cols=166 Identities=13% Similarity=0.008 Sum_probs=100.6
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCCC--------CCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccC----
Q 004217 81 RRGLASWVEAESLHHLRPKYCPLS--------PPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGH---- 148 (767)
Q Consensus 81 g~~LaSgs~DgsIrlWd~~t~~L~--------gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH---- 148 (767)
...|+.++.+ -|..++..+.++. -....|.++....+|.+.+ |..+ -+..+|..+++.. .+...
T Consensus 112 ~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~-~~~~~~~~~ 187 (758)
T 3ott_A 112 GDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFE-GIPLPVHSS 187 (758)
T ss_dssp TTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEE-EECCCCCTT
T ss_pred CCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceE-EecCCCccc
Confidence 4567777766 5777887655422 1234688998888887665 4444 4777888776643 22211
Q ss_pred --CCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec-CCCCeEEEEEcCCCCEEEEEECCcEEEEEcCCCccc
Q 004217 149 --RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD-FYRPIASIAFHASGELLAVASGHKLYIWRYNMREET 225 (767)
Q Consensus 149 --~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~-h~~~VtsVafSPdG~~LAsgSdd~V~VWDl~t~~~~ 225 (767)
...|.++.... ++..|..|.. +-+..+|..+++...... ....|.++..+.+|.+.+.. +++|.++|..+....
T Consensus 188 ~~~~~i~~i~~d~-~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~Gl~~~~~~~~~~~ 264 (758)
T 3ott_A 188 QSNLFVNSLLEDT-TRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT-DNGLYVYHNDTTPLQ 264 (758)
T ss_dssp CSSCCEEEEEEET-TTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE-TTEEEEECCTTSCCE
T ss_pred cccceeEEEEEEC-CCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe-CCceeEEecCCCcEE
Confidence 12477887766 4554333443 468889988765433211 23458888888888766544 678999987665321
Q ss_pred cCCeE----EecCCCCeEEEEEccCCCeEEEE
Q 004217 226 SSPRI----VLRTRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 226 ~~~~~----l~~h~~~VtsVaFSPDG~~LlaS 253 (767)
..... ..-....|.++....+|...+.+
T Consensus 265 ~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT 296 (758)
T 3ott_A 265 HIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT 296 (758)
T ss_dssp EECCCTTCTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred EEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe
Confidence 10000 00113468999999888865555
No 317
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=88.55 E-value=15 Score=39.70 Aligned_cols=119 Identities=14% Similarity=0.158 Sum_probs=85.7
Q ss_pred CeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEE
Q 004217 129 HTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAV 208 (767)
Q Consensus 129 GtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAs 208 (767)
..|.|.|+.++..+.+-.- .-.+.-.+| ..+.++-=. ..++.++|+++.+.++.+.....|..-.|-.+ +.|+.
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi---~AdsAIMnP-~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~-~~L~l 122 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPI---SADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVAL 122 (365)
T ss_dssp EEEEEEETTSTTSCEEEEC---CCSEEEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSS-SEEEE
T ss_pred CEEEEEECCCCCCcccccc---ccceeeeCC-CccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCC-CeEEE
Confidence 4788899987654322111 112334699 777776654 78899999999999999888889988888754 57777
Q ss_pred EECCcEEEEEcCCCccccCCeEEecC----CCCeEEEEEccCCCeEEEEEe
Q 004217 209 ASGHKLYIWRYNMREETSSPRIVLRT----RRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 209 gSdd~V~VWDl~t~~~~~~~~~l~~h----~~~VtsVaFSPDG~~LlaSgs 255 (767)
-++..|+-|++..... +...+..| ...|..-..+++.+|++..|-
T Consensus 123 VT~taVyHWs~~~~s~--P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 171 (365)
T 2xzh_A 123 VTDNAVYHWSMEGESQ--PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 171 (365)
T ss_dssp EESSEEEEEESSTTCC--CEEEEECCGGGTTCEEEEEEECTTSCEEEEEEE
T ss_pred EcCCcEEEEcccCCCC--CceeeecchhcccceEEEEEECCCCCEEEEEeE
Confidence 7888899999976432 22344444 457888889999999888764
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=87.55 E-value=5.9 Score=42.68 Aligned_cols=113 Identities=14% Similarity=0.170 Sum_probs=68.3
Q ss_pred EEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe--e-----cCCCCeEEEEEcCC---CCEEEEE--
Q 004217 142 LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--R-----DFYRPIASIAFHAS---GELLAVA-- 209 (767)
Q Consensus 142 l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~--l-----~h~~~VtsVafSPd---G~~LAsg-- 209 (767)
+..+...-...+.|+|.| ++.++++--..|.|++++..+++.... + ........|+|+|+ +.+|.+.
T Consensus 24 ~~~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eEEeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 334444456688999999 888877765589999998766554222 2 12456789999996 3444443
Q ss_pred --ECCcEEEEEcCCCc----cccCCeE-Ee----cCCCCeEEEEEccCCCeEEEEEe
Q 004217 210 --SGHKLYIWRYNMRE----ETSSPRI-VL----RTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 210 --Sdd~V~VWDl~t~~----~~~~~~~-l~----~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
..++|.-|.+.... .+..... +. .....-..|.|.|||..+++.+.
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 23447777765421 1111111 11 11223467999999986666654
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=87.52 E-value=19 Score=36.19 Aligned_cols=127 Identities=13% Similarity=0.062 Sum_probs=70.4
Q ss_pred CeEEEEeCCCCC---C------CCCCCCeEEEEECCCCCeEEEEeCC-----CeEEEEECCCCeEEE--EEccCCCCcEE
Q 004217 91 ESLHHLRPKYCP---L------SPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLK--VLHGHRRTPWV 154 (767)
Q Consensus 91 gsIrlWd~~t~~---L------~gH~~sVtsVaFSpDG~~LASgs~D-----GtVrVWDl~tg~~l~--~L~gH~~~V~s 154 (767)
..+.+||..+.+ . ........++.+ ++++++.|+.+ ..+.+||..+.+-.. .+.........
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 155 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGL 155 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEE
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceE
Confidence 458888887654 1 111111222333 57777777654 368899998876332 22211112222
Q ss_pred EEEccCCCcEEEEEeCC-----CeEEEEECCCCeEEEee--cCCCCeEEEEEcCCCCEEEEEEC------CcEEEEEcCC
Q 004217 155 VRFHPLNPTIIASGSLD-----HEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASG------HKLYIWRYNM 221 (767)
Q Consensus 155 LafsP~dg~lLaSgS~D-----GtVrIWDl~tg~~i~~l--~h~~~VtsVafSPdG~~LAsgSd------d~V~VWDl~t 221 (767)
+.+ ++++++.|+.+ ..+.+||+.+.+....- .....-.+++. -++++++.|+. +.+.+||+.+
T Consensus 156 ~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 156 VVA---SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp EEE---TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EEE---CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCC
Confidence 223 56788887765 46899999887665442 22111112222 25666677662 2399999887
Q ss_pred Cc
Q 004217 222 RE 223 (767)
Q Consensus 222 ~~ 223 (767)
.+
T Consensus 232 ~~ 233 (301)
T 2vpj_A 232 DS 233 (301)
T ss_dssp TE
T ss_pred Cc
Confidence 64
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=86.90 E-value=4.3 Score=41.55 Aligned_cols=129 Identities=15% Similarity=0.117 Sum_probs=75.1
Q ss_pred CCeEEEEeCCCeEEEEECCCCe------EEEEEccC--CCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecC
Q 004217 119 GKTLASTHGDHTVKIIDCQTGS------CLKVLHGH--RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF 190 (767)
Q Consensus 119 G~~LASgs~DGtVrVWDl~tg~------~l~~L~gH--~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h 190 (767)
...|+....| +|++=...++. ...++ ++ =..+..++|+| ++.+.+. .+|.+.-.+..+.+...-+..
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~i-G~~gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s 78 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLI-GKGGWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGR 78 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEE-ESSSCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHH
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhcccc-CccccccceeEEECC-CccEEEE--eCCeEEEECCCCCCccccccc
Confidence 3456666666 66554443332 11222 22 24678999999 8887776 677766666654222111111
Q ss_pred CCC--------eEEEEEcCCCCEEEEEECCcEEEEEcCCCcccc---CCeEEec-CCCCeEEEEEccCCCeEEEE
Q 004217 191 YRP--------IASIAFHASGELLAVASGHKLYIWRYNMREETS---SPRIVLR-TRRSLRAVHFHPHAAPLLLT 253 (767)
Q Consensus 191 ~~~--------VtsVafSPdG~~LAsgSdd~V~VWDl~t~~~~~---~~~~l~~-h~~~VtsVaFSPDG~~LlaS 253 (767)
... ..++.|+|+|.+.++ +++.|+-++-.+..... ....+.. .=..+..|.|.|+|...+++
T Consensus 79 ~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 79 AKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp CEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred ccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 111 468999999998888 77778877754322111 0011111 11467999999999966555
No 321
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=85.84 E-value=8.8 Score=42.59 Aligned_cols=106 Identities=10% Similarity=0.133 Sum_probs=62.8
Q ss_pred CCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEe--ec-------CCCCeEEEEEcCC---CCEEEEEE-C----
Q 004217 149 RRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGS--RD-------FYRPIASIAFHAS---GELLAVAS-G---- 211 (767)
Q Consensus 149 ~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~--l~-------h~~~VtsVafSPd---G~~LAsgS-d---- 211 (767)
-...+.|+|.| +++++++-...+.|++++..+++.... +. .......|+|+|+ +.+|.++. .
T Consensus 26 l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 44678999999 888777754445799888765554322 21 2345679999995 55444443 1
Q ss_pred ---------CcEEEEEcCCCc-cccCCe-EE---e-cCCCCeEEEEEccCCCeEEEEEe
Q 004217 212 ---------HKLYIWRYNMRE-ETSSPR-IV---L-RTRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 212 ---------d~V~VWDl~t~~-~~~~~~-~l---~-~h~~~VtsVaFSPDG~~LlaSgs 255 (767)
..|.-|++.... .+.... .+ . ........|+|.|||..+++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 236666654321 110001 11 1 11234789999999986666554
No 322
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=85.54 E-value=17 Score=38.60 Aligned_cols=137 Identities=12% Similarity=0.044 Sum_probs=76.0
Q ss_pred eEEEEEEcCCCEEEEEeCCCeEEEEeCCCC--C-CC-------CCCCCeEEEEECCC---CCeEEEEe-C-------CCe
Q 004217 72 QIFEAGRDARRGLASWVEAESLHHLRPKYC--P-LS-------PPPRSTIAAAFSPD---GKTLASTH-G-------DHT 130 (767)
Q Consensus 72 ~~~vA~sd~g~~LaSgs~DgsIrlWd~~t~--~-L~-------gH~~sVtsVaFSpD---G~~LASgs-~-------DGt 130 (767)
+..+++..+++.|+.....+.|++++.... + +. ........|+|+|| +.+|..+. . ...
T Consensus 20 P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~ 99 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTA 99 (353)
T ss_dssp EEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEE
T ss_pred cEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeE
Confidence 556777677763445556788988875432 1 11 12346789999996 55554443 2 235
Q ss_pred EEEEECCCC--e--EEE-EEccC------CCCcEEEEEccCCCcEEEEEeC-------------CCeEEEEECCCC----
Q 004217 131 VKIIDCQTG--S--CLK-VLHGH------RRTPWVVRFHPLNPTIIASGSL-------------DHEVRLWNASTA---- 182 (767)
Q Consensus 131 VrVWDl~tg--~--~l~-~L~gH------~~~V~sLafsP~dg~lLaSgS~-------------DGtVrIWDl~tg---- 182 (767)
|..|++..+ + ... .+.+- ......|.|.| ++.++++.+. .+.|.-+|....
T Consensus 100 v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~ 178 (353)
T 2g8s_A 100 VGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD 178 (353)
T ss_dssp EEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred EEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence 666666533 1 112 12211 11235799999 7777777543 246666666432
Q ss_pred ----------eEEEeecCCCCeEEEEEcC-CCCEEEEEE
Q 004217 183 ----------ECIGSRDFYRPIASIAFHA-SGELLAVAS 210 (767)
Q Consensus 183 ----------~~i~~l~h~~~VtsVafSP-dG~~LAsgS 210 (767)
..+...++ .....++|+| +|+++++-.
T Consensus 179 npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 179 NPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp CTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEE
T ss_pred CCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEec
Confidence 11222223 3357899999 566555443
No 323
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=85.17 E-value=28 Score=35.15 Aligned_cols=128 Identities=12% Similarity=0.062 Sum_probs=72.0
Q ss_pred CCeEEEEeCCCCC---C---CCCCCCeEEEEECCCCCeEEEEeCC----CeEEEEECCCCeEEEEE--ccCCCCcEEEEE
Q 004217 90 AESLHHLRPKYCP---L---SPPPRSTIAAAFSPDGKTLASTHGD----HTVKIIDCQTGSCLKVL--HGHRRTPWVVRF 157 (767)
Q Consensus 90 DgsIrlWd~~t~~---L---~gH~~sVtsVaFSpDG~~LASgs~D----GtVrVWDl~tg~~l~~L--~gH~~~V~sLaf 157 (767)
...+..||..+.+ + ........++.+ ++++++.|+.+ ..+.+||..+++-...- .........+.+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 100 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA 100 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE
Confidence 4568888887652 1 111112223332 66777787755 67899999887643222 111112222333
Q ss_pred ccCCCcEEEEEeCC------CeEEEEECCCCeEEEee--cCCCCeEEEEEcCCCCEEEEEE----------CCcEEEEEc
Q 004217 158 HPLNPTIIASGSLD------HEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVAS----------GHKLYIWRY 219 (767)
Q Consensus 158 sP~dg~lLaSgS~D------GtVrIWDl~tg~~i~~l--~h~~~VtsVafSPdG~~LAsgS----------dd~V~VWDl 219 (767)
++.+++.|+.+ ..+.+||..+.+....- .....-.+++. -++++++.|+ .+.+.+||.
T Consensus 101 ---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~ 176 (306)
T 3ii7_A 101 ---EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDP 176 (306)
T ss_dssp ---TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEET
T ss_pred ---CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCC
Confidence 56788888765 56899999987755442 21111122222 2566666665 223899998
Q ss_pred CCCc
Q 004217 220 NMRE 223 (767)
Q Consensus 220 ~t~~ 223 (767)
.+.+
T Consensus 177 ~~~~ 180 (306)
T 3ii7_A 177 ATET 180 (306)
T ss_dssp TTTE
T ss_pred CCCe
Confidence 8764
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=84.47 E-value=18 Score=36.58 Aligned_cols=126 Identities=18% Similarity=0.176 Sum_probs=68.1
Q ss_pred eEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEeCC-------CeEEEEECCCCeEEEE--EccCCCCcEEEE
Q 004217 92 SLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-------HTVKIIDCQTGSCLKV--LHGHRRTPWVVR 156 (767)
Q Consensus 92 sIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs~D-------GtVrVWDl~tg~~l~~--L~gH~~~V~sLa 156 (767)
.+.+||..+.+ +........++.+ ++++++.|+.+ ..+.+||+.+.+-... +.........+.
T Consensus 125 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 202 (302)
T 2xn4_A 125 SVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV 202 (302)
T ss_dssp EEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred eEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE
Confidence 47788887652 1111112222233 56777777643 3588999988763322 111111222233
Q ss_pred EccCCCcEEEEEeCC-----CeEEEEECCCCeEEEeec--CCCCeEEEEEcCCCCEEEEEECC------cEEEEEcCCCc
Q 004217 157 FHPLNPTIIASGSLD-----HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVASGH------KLYIWRYNMRE 223 (767)
Q Consensus 157 fsP~dg~lLaSgS~D-----GtVrIWDl~tg~~i~~l~--h~~~VtsVafSPdG~~LAsgSdd------~V~VWDl~t~~ 223 (767)
+ ++.+++.|+.+ ..+.+||+.+.+....-. ....-..++. -++++++.|+.+ .+.+||..+.+
T Consensus 203 ~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 203 L---NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp E---TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred E---CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 3 56888888764 469999999876554422 1111112222 256666666522 28888887654
No 325
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=84.45 E-value=19 Score=36.24 Aligned_cols=126 Identities=18% Similarity=0.198 Sum_probs=69.8
Q ss_pred CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEeCC-----CeEEEEECCCCeEEEE--EccCCCCcEEEEE
Q 004217 91 ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLKV--LHGHRRTPWVVRF 157 (767)
Q Consensus 91 gsIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs~D-----GtVrVWDl~tg~~l~~--L~gH~~~V~sLaf 157 (767)
..+.++|..+.+ +......-.++.+ ++++++.|+.+ ..+.+||+.+.+-... +.........+.+
T Consensus 128 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 205 (301)
T 2vpj_A 128 TSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL 205 (301)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE
Confidence 458888887652 1111111222233 67777777754 4589999988764322 1111111222333
Q ss_pred ccCCCcEEEEEeCC-----CeEEEEECCCCeEEEee--cCCC-CeEEEEEcCCCCEEEEEECC------cEEEEEcCCCc
Q 004217 158 HPLNPTIIASGSLD-----HEVRLWNASTAECIGSR--DFYR-PIASIAFHASGELLAVASGH------KLYIWRYNMRE 223 (767)
Q Consensus 158 sP~dg~lLaSgS~D-----GtVrIWDl~tg~~i~~l--~h~~-~VtsVafSPdG~~LAsgSdd------~V~VWDl~t~~ 223 (767)
++.+++.|+.+ ..+.+||+.+.+....- .... ....+.+ ++++++.|+.+ .+.+||..+.+
T Consensus 206 ---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 206 ---NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp ---TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred ---CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 56788888764 46899999987755442 2111 1122222 56666666522 27888887654
No 326
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=83.53 E-value=22 Score=39.88 Aligned_cols=120 Identities=14% Similarity=0.165 Sum_probs=84.7
Q ss_pred CCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEE
Q 004217 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLA 207 (767)
Q Consensus 128 DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LA 207 (767)
+..|-|.|+.++..+..-. -.-.+.-.+| ..+.++-=. ..++.|+|+.+.+.++.+.....|..-.|-.+ +.|+
T Consensus 47 ~~~vvIiDl~~~~~~~rrp---i~AdsAIMnP-~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~-~~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEE---CCCSEEEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET-TEEE
T ss_pred CCeEEEEECCCCCcceecc---cccceeeeCC-CCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC-CeEE
Confidence 3478889998765432211 1112344788 667666654 78999999999999999887788888888644 5777
Q ss_pred EEECCcEEEEEcCCCccccCCeEEecC----CCCeEEEEEccCCCeEEEEEe
Q 004217 208 VASGHKLYIWRYNMREETSSPRIVLRT----RRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 208 sgSdd~V~VWDl~t~~~~~~~~~l~~h----~~~VtsVaFSPDG~~LlaSgs 255 (767)
.-++..|+-|++..... +...+..| ...|..-..++|.+|++..|-
T Consensus 121 lVT~taVyHWsi~~~s~--P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI 170 (494)
T 1bpo_A 121 LVTDNAVYHWSMEGESQ--PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (494)
T ss_dssp EECSSEEEEEESSSSCC--CEEEEECCGGGTTCEEEEEEECTTSSEEEEEEE
T ss_pred EEcCCeeEEecccCCCC--chhheecchhcccceEEEEEECCCCCeEEEEee
Confidence 77788899999976332 22344444 457888889999999887663
No 327
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=82.53 E-value=31 Score=34.73 Aligned_cols=127 Identities=18% Similarity=0.165 Sum_probs=69.5
Q ss_pred CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEeCCC-----eEEEEECCCCeEEEE--EccCCCCcEEEEE
Q 004217 91 ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGDH-----TVKIIDCQTGSCLKV--LHGHRRTPWVVRF 157 (767)
Q Consensus 91 gsIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs~DG-----tVrVWDl~tg~~l~~--L~gH~~~V~sLaf 157 (767)
..+.+||..+.+ +........++.+ ++++++.|+.++ .+.+||+.+.+-... +.........+.+
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 154 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV 154 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred cceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE
Confidence 357888887652 1111112223333 577778887653 588899888763322 1111111222222
Q ss_pred ccCCCcEEEEEeCC-------CeEEEEECCCCeEEEe--ecCCCCeEEEEEcCCCCEEEEEEC------CcEEEEEcCCC
Q 004217 158 HPLNPTIIASGSLD-------HEVRLWNASTAECIGS--RDFYRPIASIAFHASGELLAVASG------HKLYIWRYNMR 222 (767)
Q Consensus 158 sP~dg~lLaSgS~D-------GtVrIWDl~tg~~i~~--l~h~~~VtsVafSPdG~~LAsgSd------d~V~VWDl~t~ 222 (767)
++++++.|+.+ ..+.+||+.+.+.... +.....-.+++. -++++++.|+. +.+.+||+.+.
T Consensus 155 ---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 155 ---GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp ---TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred ---CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 56777777643 4588999988765544 222111122222 25677777652 23899998776
Q ss_pred c
Q 004217 223 E 223 (767)
Q Consensus 223 ~ 223 (767)
+
T Consensus 231 ~ 231 (302)
T 2xn4_A 231 A 231 (302)
T ss_dssp E
T ss_pred C
Confidence 4
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=82.40 E-value=20 Score=36.51 Aligned_cols=127 Identities=13% Similarity=0.106 Sum_probs=69.5
Q ss_pred CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEeCC-----CeEEEEECCCCeEEEE--EccCCCCcEEEEE
Q 004217 91 ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLKV--LHGHRRTPWVVRF 157 (767)
Q Consensus 91 gsIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs~D-----GtVrVWDl~tg~~l~~--L~gH~~~V~sLaf 157 (767)
..+.+||..+.+ +......-.++.+ ++++++.|+.+ ..+.+||+.+.+-... +.........+.+
T Consensus 137 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 214 (308)
T 1zgk_A 137 NSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL 214 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE
Confidence 457888887652 1111122223333 67777777764 4589999987753321 1111112222333
Q ss_pred ccCCCcEEEEEeCC-----CeEEEEECCCCeEEEeec--CCCCeEEEEEcCCCCEEEEEEC------CcEEEEEcCCCc
Q 004217 158 HPLNPTIIASGSLD-----HEVRLWNASTAECIGSRD--FYRPIASIAFHASGELLAVASG------HKLYIWRYNMRE 223 (767)
Q Consensus 158 sP~dg~lLaSgS~D-----GtVrIWDl~tg~~i~~l~--h~~~VtsVafSPdG~~LAsgSd------d~V~VWDl~t~~ 223 (767)
++.+++.|+.+ ..+.+||+.+.+....-. ....-.+++. -++++++.|+. +.+.+||+.+.+
T Consensus 215 ---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 215 ---HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp ---TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred ---CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 56788888765 569999999876554322 1111122222 25666666652 227888877653
No 329
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=81.10 E-value=31 Score=35.03 Aligned_cols=127 Identities=15% Similarity=0.133 Sum_probs=69.9
Q ss_pred CeEEEEeCCCCC------CCCCCCCeEEEEECCCCCeEEEEeCC-----CeEEEEECCCCeEEEE--EccCCCCcEEEEE
Q 004217 91 ESLHHLRPKYCP------LSPPPRSTIAAAFSPDGKTLASTHGD-----HTVKIIDCQTGSCLKV--LHGHRRTPWVVRF 157 (767)
Q Consensus 91 gsIrlWd~~t~~------L~gH~~sVtsVaFSpDG~~LASgs~D-----GtVrVWDl~tg~~l~~--L~gH~~~V~sLaf 157 (767)
..+.++|..+.+ +........++.+ ++++++.|+.+ ..+.+||..+.+-... +.........+.+
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 167 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL 167 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE
Confidence 457888887652 1111122223333 67777777643 3688999988763321 1111112222333
Q ss_pred ccCCCcEEEEEeCC-----CeEEEEECCCCeEEEee--cCCCCeEEEEEcCCCCEEEEEEC------CcEEEEEcCCCc
Q 004217 158 HPLNPTIIASGSLD-----HEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASG------HKLYIWRYNMRE 223 (767)
Q Consensus 158 sP~dg~lLaSgS~D-----GtVrIWDl~tg~~i~~l--~h~~~VtsVafSPdG~~LAsgSd------d~V~VWDl~t~~ 223 (767)
++.+++.|+.+ ..+.+||+.+.+....- .....-.+++.. ++++++.|+. +.+.+||+.+.+
T Consensus 168 ---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 168 ---NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp ---TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ---CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 56788877764 46899999887655432 111111222222 6667777652 339999988764
No 330
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=80.57 E-value=32 Score=35.89 Aligned_cols=144 Identities=8% Similarity=0.006 Sum_probs=82.5
Q ss_pred CeEEEEeCCCCCCCC-CCCCeEEEEECCCCCeEEEEe----CCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEE
Q 004217 91 ESLHHLRPKYCPLSP-PPRSTIAAAFSPDGKTLASTH----GDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTII 165 (767)
Q Consensus 91 gsIrlWd~~t~~L~g-H~~sVtsVaFSpDG~~LASgs----~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lL 165 (767)
..|+..++...+... ... .+..|++++++|+-.. .+..|...+++... ...+..+.. ..|++ +++.|
T Consensus 88 ~~Iy~i~~dg~~~~~l~~~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~-~g~~i 159 (302)
T 3s25_A 88 NSLCRIKRNGHGSTVLDPD--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNT-SDRYF 159 (302)
T ss_dssp EEEEEEETTSCCCEEEECS--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEE-ETTEE
T ss_pred CeEEEEeCCCCcceEeecC--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeE-ECCEE
Confidence 356666666542110 011 1337788899988776 34466666776433 444544433 34566 44555
Q ss_pred EEEe-CCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEEEEECC---cEEEEEcCCCccccCCeEEecCCCCeEEE
Q 004217 166 ASGS-LDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLAVASGH---KLYIWRYNMREETSSPRIVLRTRRSLRAV 241 (767)
Q Consensus 166 aSgS-~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LAsgSdd---~V~VWDl~t~~~~~~~~~l~~h~~~VtsV 241 (767)
+-.+ ...+|..-++..+.....+. .... ..++|++.+|+-...+ .|..-++....... +. ...+ .
T Consensus 160 y~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~----Lt--~~~~--~ 228 (302)
T 3s25_A 160 YYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVV----LT--EANI--E 228 (302)
T ss_dssp EEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEE----CS--CSCE--E
T ss_pred EEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEE----Ee--CCCc--c
Confidence 5444 36788888887766554443 2222 3466999988877632 37777776654322 22 2233 3
Q ss_pred EEccCCCeEEEE
Q 004217 242 HFHPHAAPLLLT 253 (767)
Q Consensus 242 aFSPDG~~LlaS 253 (767)
.|+|++++|..+
T Consensus 229 ~~~~~g~~Iy~~ 240 (302)
T 3s25_A 229 HYNVYGSLIFYQ 240 (302)
T ss_dssp EEEEETTEEEEE
T ss_pred eEEECCCEEEEE
Confidence 488899988655
No 331
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=80.20 E-value=1.3e+02 Score=37.58 Aligned_cols=103 Identities=14% Similarity=0.111 Sum_probs=66.0
Q ss_pred CCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEE-ccCCCCcEEEEEccCC-----CcEEEEEeC-CCeEEEEECC
Q 004217 108 RSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVL-HGHRRTPWVVRFHPLN-----PTIIASGSL-DHEVRLWNAS 180 (767)
Q Consensus 108 ~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L-~gH~~~V~sLafsP~d-----g~lLaSgS~-DGtVrIWDl~ 180 (767)
..|...+.+. .+++.+. ++.+.+++++.++..... ..-...|.|+++.|.. .++++.|.. |++|+|+++.
T Consensus 514 ~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred CEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 4576666653 4666665 578888888766422111 1234679999997632 478999996 9999999999
Q ss_pred CCeEEEeec--CCCCeEEEEEcC--CCCEEEEEECCc
Q 004217 181 TAECIGSRD--FYRPIASIAFHA--SGELLAVASGHK 213 (767)
Q Consensus 181 tg~~i~~l~--h~~~VtsVafSP--dG~~LAsgSdd~ 213 (767)
+.+.+.... ......++.+.. ...+|..|-.++
T Consensus 591 ~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG 627 (1158)
T 3ei3_A 591 SFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDG 627 (1158)
T ss_dssp TCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTS
T ss_pred CCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCC
Confidence 877665433 223445554432 234788887766
No 332
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=80.14 E-value=45 Score=41.60 Aligned_cols=93 Identities=13% Similarity=0.143 Sum_probs=58.8
Q ss_pred eEEEEECCCCeEEEEEccC-CCCcEEEE---EccCCCcEEEEEe----------CCCeEEEEECCCCeEE--EeecCCCC
Q 004217 130 TVKIIDCQTGSCLKVLHGH-RRTPWVVR---FHPLNPTIIASGS----------LDHEVRLWNASTAECI--GSRDFYRP 193 (767)
Q Consensus 130 tVrVWDl~tg~~l~~L~gH-~~~V~sLa---fsP~dg~lLaSgS----------~DGtVrIWDl~tg~~i--~~l~h~~~ 193 (767)
.|++.|-.+.+.+..+.-. ...+.+++ |......+++.|. ..|.|.+|++..++.. .....+++
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 3677777776666554322 22344444 3332346787775 3478999998755433 33456788
Q ss_pred eEEEEEcCCCCEEEEEECCcEEEEEcCCCcc
Q 004217 194 IASIAFHASGELLAVASGHKLYIWRYNMREE 224 (767)
Q Consensus 194 VtsVafSPdG~~LAsgSdd~V~VWDl~t~~~ 224 (767)
|++++-- +| +|++|-+.+|++||+...+.
T Consensus 888 v~al~~~-~g-~Lla~ig~~l~vy~l~~~~~ 916 (1158)
T 3ei3_A 888 VYSMVEF-NG-KLLASINSTVRLYEWTTEKE 916 (1158)
T ss_dssp EEEEEEE-TT-EEEEEETTEEEEEEECTTSC
T ss_pred CEEEeee-CC-EEEEEcCCEEEEEECCCCce
Confidence 9888733 34 67777788899999986654
No 333
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=78.93 E-value=48 Score=33.62 Aligned_cols=128 Identities=9% Similarity=0.001 Sum_probs=69.9
Q ss_pred CeEEEEeCCCCC-----CCCCCCCeEEEEECCCCCeEEEEeC-----C------CeEEEEECCCCeEEEEEccCC---CC
Q 004217 91 ESLHHLRPKYCP-----LSPPPRSTIAAAFSPDGKTLASTHG-----D------HTVKIIDCQTGSCLKVLHGHR---RT 151 (767)
Q Consensus 91 gsIrlWd~~t~~-----L~gH~~sVtsVaFSpDG~~LASgs~-----D------GtVrVWDl~tg~~l~~L~gH~---~~ 151 (767)
..+..||..+.+ +..............++++++.|+. . ..+.+||..+++-. .+..-. ..
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~ 91 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GMPPLPSPRCL 91 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-ECCCBSSCEES
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-ECCCCCcchhc
Confidence 467777776652 2222222333334457888888883 1 13788998887632 221111 11
Q ss_pred cEEEEEccCCCcEEEEEeCC--------CeEEEEECCCCeEEEee--cCCCCeEEEEEcCCCCEEEEEEC-------CcE
Q 004217 152 PWVVRFHPLNPTIIASGSLD--------HEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASG-------HKL 214 (767)
Q Consensus 152 V~sLafsP~dg~lLaSgS~D--------GtVrIWDl~tg~~i~~l--~h~~~VtsVafSPdG~~LAsgSd-------d~V 214 (767)
...+.+ ++.+++.|+.+ ..+.+||..+.+....- .....-.+++. -++++++.|+. +.+
T Consensus 92 ~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 167 (315)
T 4asc_A 92 FGLGEA---LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKM 167 (315)
T ss_dssp CEEEEE---TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCE
T ss_pred eeEEEE---CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceE
Confidence 122222 56777777742 46899999987654432 22111122222 35666666653 239
Q ss_pred EEEEcCCCc
Q 004217 215 YIWRYNMRE 223 (767)
Q Consensus 215 ~VWDl~t~~ 223 (767)
.+||..+.+
T Consensus 168 ~~yd~~~~~ 176 (315)
T 4asc_A 168 CVYDPKKFE 176 (315)
T ss_dssp EEEETTTTE
T ss_pred EEEeCCCCe
Confidence 999988764
No 334
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=77.92 E-value=5.9 Score=45.70 Aligned_cols=101 Identities=19% Similarity=0.185 Sum_probs=69.9
Q ss_pred CCeEEEEECCCCCeEEEEeC-CCeEEEEECCC------CeE-------EEEEccCCCCcEEEEEccCCCcEEEEEeCCCe
Q 004217 108 RSTIAAAFSPDGKTLASTHG-DHTVKIIDCQT------GSC-------LKVLHGHRRTPWVVRFHPLNPTIIASGSLDHE 173 (767)
Q Consensus 108 ~sVtsVaFSpDG~~LASgs~-DGtVrVWDl~t------g~~-------l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGt 173 (767)
.+...+.++|||++++.++. +.+|.|+|+++ ++. ..... -.-.....+|.+ +++...|...|..
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~-~G~aYTtlfidSq 400 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG-RGNAYTTLFIDSQ 400 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS-SSEEEEEETTTTE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC-CCceEeeeeecce
Confidence 34568899999999977765 78999999874 111 22222 234578899999 7777777889999
Q ss_pred EEEEECCCC----------eEEEeecCCCCeEEEEE------cCCCCEEEEEE
Q 004217 174 VRLWNASTA----------ECIGSRDFYRPIASIAF------HASGELLAVAS 210 (767)
Q Consensus 174 VrIWDl~tg----------~~i~~l~h~~~VtsVaf------SPdG~~LAsgS 210 (767)
|..|++... ..+..+.-...+-.+.- .|+|++|++..
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 999998753 23444443333333333 57999999886
No 335
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=76.62 E-value=88 Score=33.85 Aligned_cols=141 Identities=14% Similarity=0.121 Sum_probs=92.3
Q ss_pred CCCeEEEEeCCCCCC-CCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEE
Q 004217 89 EAESLHHLRPKYCPL-SPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIAS 167 (767)
Q Consensus 89 ~DgsIrlWd~~t~~L-~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaS 167 (767)
++.+|-+.|+....- ....-.--+.-.+|..+.||.-. ..++.|+|+++...++.+.- ...|.--.|-. .+.|+-
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis--~~~L~l 122 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS--LNTVAL 122 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECS--SSEEEE
T ss_pred CCCEEEEEECCCCCCccccccccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecC--CCeEEE
Confidence 344677888876421 11112223455688888777665 57999999999998888764 45677778865 455555
Q ss_pred EeCCCeEEEEECCC-CeEEEeec-----CCCCeEEEEEcCCCCEEEEEE----CC----cEEEEEcCCCccccCCeEEec
Q 004217 168 GSLDHEVRLWNAST-AECIGSRD-----FYRPIASIAFHASGELLAVAS----GH----KLYIWRYNMREETSSPRIVLR 233 (767)
Q Consensus 168 gS~DGtVrIWDl~t-g~~i~~l~-----h~~~VtsVafSPdG~~LAsgS----dd----~V~VWDl~t~~~~~~~~~l~~ 233 (767)
.. +..|.-|++.. ..+++.++ ....|..-..+++.++++..+ ++ .+.+|..+.+.. +.+.+
T Consensus 123 VT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s----Q~ieG 197 (365)
T 2xzh_A 123 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPIEG 197 (365)
T ss_dssp EE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE----EEECC
T ss_pred Ec-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc----ceeee
Confidence 43 56799999974 34555543 245677777899999877655 33 289998876543 34667
Q ss_pred CCCCe
Q 004217 234 TRRSL 238 (767)
Q Consensus 234 h~~~V 238 (767)
|....
T Consensus 198 haa~F 202 (365)
T 2xzh_A 198 HAASF 202 (365)
T ss_dssp SEEEE
T ss_pred eeeee
Confidence 74444
No 336
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=74.13 E-value=42 Score=34.64 Aligned_cols=127 Identities=17% Similarity=0.198 Sum_probs=67.8
Q ss_pred eCCCeEEEEeCCC--C---CCCC---CCCC-eEEEEECCCCCeEEEEeC-C---------CeEEEEECCCCeEEEEEccC
Q 004217 88 VEAESLHHLRPKY--C---PLSP---PPRS-TIAAAFSPDGKTLASTHG-D---------HTVKIIDCQTGSCLKVLHGH 148 (767)
Q Consensus 88 s~DgsIrlWd~~t--~---~L~g---H~~s-VtsVaFSpDG~~LASgs~-D---------GtVrVWDl~tg~~l~~L~gH 148 (767)
.....+..+|... . ++.. .... -.++.+ ++++++.|+. + ..+.+||..+.+-.. +...
T Consensus 28 ~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~-~~~~ 104 (357)
T 2uvk_A 28 SAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVK-LMSH 104 (357)
T ss_dssp GGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEE-CSCC
T ss_pred cCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEE-CCCC
Confidence 3445688888763 2 1211 1121 222333 5777777776 2 468999998876332 2111
Q ss_pred --CCCcEEEEEccCCCcEEEEEeCC---------------------------------------CeEEEEECCCCeEEEe
Q 004217 149 --RRTPWVVRFHPLNPTIIASGSLD---------------------------------------HEVRLWNASTAECIGS 187 (767)
Q Consensus 149 --~~~V~sLafsP~dg~lLaSgS~D---------------------------------------GtVrIWDl~tg~~i~~ 187 (767)
........... ++++++.|+.+ ..+.+||..+.+....
T Consensus 105 ~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 183 (357)
T 2uvk_A 105 APMGMAGHVTFVH-NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYA 183 (357)
T ss_dssp CSSCCSSEEEEEE-TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEE
T ss_pred CCcccccceEEEE-CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEEC
Confidence 11111111223 67888888865 5799999988765544
Q ss_pred --ecCCCCe-EEEEEcCCCCEEEEEEC-------CcEEEEEc
Q 004217 188 --RDFYRPI-ASIAFHASGELLAVASG-------HKLYIWRY 219 (767)
Q Consensus 188 --l~h~~~V-tsVafSPdG~~LAsgSd-------d~V~VWDl 219 (767)
+...... .+++.. ++++++.|+. +.+.+||+
T Consensus 184 ~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 184 GESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp EECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred CCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 2222222 233332 5666666651 23788887
No 337
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=73.99 E-value=79 Score=31.97 Aligned_cols=102 Identities=9% Similarity=0.010 Sum_probs=57.6
Q ss_pred CCCeEEEEeCC--------CeEEEEECCCCeEEEE--EccCCCCcEEEEEccCCCcEEEEEeC-C-----CeEEEEECCC
Q 004217 118 DGKTLASTHGD--------HTVKIIDCQTGSCLKV--LHGHRRTPWVVRFHPLNPTIIASGSL-D-----HEVRLWNAST 181 (767)
Q Consensus 118 DG~~LASgs~D--------GtVrVWDl~tg~~l~~--L~gH~~~V~sLafsP~dg~lLaSgS~-D-----GtVrIWDl~t 181 (767)
++++++.|+.+ ..+.+||..+.+-... +.........+.+ ++++++.|+. + ..+.+||..+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH---MDLVYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCTTSCBCCCEEEEETTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE---CCEEEEEeCCCCCCcccceEEEEeCCC
Confidence 56777777742 4589999988753221 1111111222222 5678888876 2 4689999998
Q ss_pred CeEEEeec--CCCCeEEEEEcCCCCEEEEEEC-C-----cEEEEEcCCCc
Q 004217 182 AECIGSRD--FYRPIASIAFHASGELLAVASG-H-----KLYIWRYNMRE 223 (767)
Q Consensus 182 g~~i~~l~--h~~~VtsVafSPdG~~LAsgSd-d-----~V~VWDl~t~~ 223 (767)
.+....-. ....-.+++. -++++++.|+. + .+.+||+.+.+
T Consensus 175 ~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 175 FEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 76554322 1111122222 26677777762 2 28889987764
No 338
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=73.02 E-value=31 Score=38.38 Aligned_cols=104 Identities=21% Similarity=0.192 Sum_probs=60.4
Q ss_pred CeEEEEECCCCC-eEEEEeCCCeEEEEECCCCe---EEEEEc-----c----CCCCcEEEEEccC---CCcEEEEEeCC-
Q 004217 109 STIAAAFSPDGK-TLASTHGDHTVKIIDCQTGS---CLKVLH-----G----HRRTPWVVRFHPL---NPTIIASGSLD- 171 (767)
Q Consensus 109 sVtsVaFSpDG~-~LASgs~DGtVrVWDl~tg~---~l~~L~-----g----H~~~V~sLafsP~---dg~lLaSgS~D- 171 (767)
.-+.|+|.|||. .|+++...|.|++++..... .+..+. + .......|+|+|+ ++.++++-+.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 357899999986 55566788999999754321 122221 1 1356788999992 24555553321
Q ss_pred -----------CeEEEEECCC----------CeEEEeec---CCCCeEEEEEcCCCCEEEEEECC
Q 004217 172 -----------HEVRLWNAST----------AECIGSRD---FYRPIASIAFHASGELLAVASGH 212 (767)
Q Consensus 172 -----------GtVrIWDl~t----------g~~i~~l~---h~~~VtsVafSPdG~~LAsgSdd 212 (767)
..|.-|.+.. .+.+..+. .......|+|.|||.+.++.++.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1344465542 12222221 22346789999999866666543
No 339
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=70.51 E-value=53 Score=39.93 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=47.3
Q ss_pred CeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc-----CCCCcEEEEEccCCCcEEEEE---eCCCeEEEEECC
Q 004217 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG-----HRRTPWVVRFHPLNPTIIASG---SLDHEVRLWNAS 180 (767)
Q Consensus 109 sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g-----H~~~V~sLafsP~dg~lLaSg---S~DGtVrIWDl~ 180 (767)
.+.+++..++..++++-+.|+++|||++.+++++.+..- ...........|..+.++..- ..+|..++|.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~~~g~F~~~~~~ 316 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDNSHGSFSIYKLN 316 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCSSSCEEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCCCCcEEEEEEEe
Confidence 578888888889999999999999999999998876521 111112223344333433322 345777777654
No 340
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=69.71 E-value=1.5e+02 Score=33.33 Aligned_cols=146 Identities=14% Similarity=0.122 Sum_probs=94.5
Q ss_pred CCCeEEEEeCCCCC-CCCCCCCeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEE
Q 004217 89 EAESLHHLRPKYCP-LSPPPRSTIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIAS 167 (767)
Q Consensus 89 ~DgsIrlWd~~t~~-L~gH~~sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaS 167 (767)
++..|-+.|+.... .....-.--+.-.+|..+.||.-. ..++.|+|+++...++.+.-. ..|.-..|-. .+.|+-
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis--~~~l~l 121 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWIS--LNTVAL 121 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEE--TTEEEE
T ss_pred CCCeEEEEECCCCCcceecccccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecC--CCeEEE
Confidence 34467788876642 111122233566778777777665 679999999999988887654 4566677765 355554
Q ss_pred EeCCCeEEEEECCC-CeEEEeec-----CCCCeEEEEEcCCCCEEEEEE----CC----cEEEEEcCCCccccCCeEEec
Q 004217 168 GSLDHEVRLWNAST-AECIGSRD-----FYRPIASIAFHASGELLAVAS----GH----KLYIWRYNMREETSSPRIVLR 233 (767)
Q Consensus 168 gS~DGtVrIWDl~t-g~~i~~l~-----h~~~VtsVafSPdG~~LAsgS----dd----~V~VWDl~t~~~~~~~~~l~~ 233 (767)
.. +..|.-|++.. ..+++.++ ....|..-..+++.+|++..+ ++ .+.+|..+.+.. ..+.+
T Consensus 122 VT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s----Q~ieG 196 (494)
T 1bpo_A 122 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS----QPIEG 196 (494)
T ss_dssp EC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE----EEECC
T ss_pred Ec-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc----chhee
Confidence 43 66799999974 34555543 245677777899999877654 22 289998876543 35677
Q ss_pred CCCCeEEEEE
Q 004217 234 TRRSLRAVHF 243 (767)
Q Consensus 234 h~~~VtsVaF 243 (767)
|......+.+
T Consensus 197 haa~F~~~~~ 206 (494)
T 1bpo_A 197 HAASFAQFKM 206 (494)
T ss_dssp SEEEEEEEEC
T ss_pred eeeeeEEEec
Confidence 7555544443
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=69.70 E-value=94 Score=31.93 Aligned_cols=80 Identities=8% Similarity=-0.173 Sum_probs=38.1
Q ss_pred CeEEEEECCCCeEEEE--EccCCCCcEEEEEccCCCcEEEEEeC------CCeEEEEEC--CCCeEEEe--ecCCC-CeE
Q 004217 129 HTVKIIDCQTGSCLKV--LHGHRRTPWVVRFHPLNPTIIASGSL------DHEVRLWNA--STAECIGS--RDFYR-PIA 195 (767)
Q Consensus 129 GtVrVWDl~tg~~l~~--L~gH~~~V~sLafsP~dg~lLaSgS~------DGtVrIWDl--~tg~~i~~--l~h~~-~Vt 195 (767)
..+.+||..+.+-... +......-.++... ++.+++.|+. ...+.+||+ .+.+.... +.... ...
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 4799999988763322 22111111223332 5677777764 345778887 44443332 21111 111
Q ss_pred EEEEcCCCCEEEEEE
Q 004217 196 SIAFHASGELLAVAS 210 (767)
Q Consensus 196 sVafSPdG~~LAsgS 210 (767)
..+...++++++.|+
T Consensus 246 ~~~~~~~~~iyv~GG 260 (357)
T 2uvk_A 246 GFAGISNDSLIFAGG 260 (357)
T ss_dssp CEEEEETTEEEEECC
T ss_pred ceEEEECCEEEEEcC
Confidence 112223566666665
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=68.32 E-value=1.1e+02 Score=31.07 Aligned_cols=125 Identities=14% Similarity=0.112 Sum_probs=66.1
Q ss_pred EEEEeCCCCC---C---CCCCCCeEEEEECCCCCeEEEEeCC-------CeEEEEECCCCeEEEE--EccCCCCcEEEEE
Q 004217 93 LHHLRPKYCP---L---SPPPRSTIAAAFSPDGKTLASTHGD-------HTVKIIDCQTGSCLKV--LHGHRRTPWVVRF 157 (767)
Q Consensus 93 IrlWd~~t~~---L---~gH~~sVtsVaFSpDG~~LASgs~D-------GtVrVWDl~tg~~l~~--L~gH~~~V~sLaf 157 (767)
+..+|..+.+ + .........+.+ ++++++.|+.+ ..+.+||..+.+-... +.........+.
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~- 156 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS- 156 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-
Confidence 6778876652 1 111112222333 57777888764 3588899987763322 111111112222
Q ss_pred ccCCCcEEEEEeC------CCeEEEEECCCCeEEEee--cCCCCeEEEEEcCCCCEEEEEEC--C----cEEEEEcCCCc
Q 004217 158 HPLNPTIIASGSL------DHEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVASG--H----KLYIWRYNMRE 223 (767)
Q Consensus 158 sP~dg~lLaSgS~------DGtVrIWDl~tg~~i~~l--~h~~~VtsVafSPdG~~LAsgSd--d----~V~VWDl~t~~ 223 (767)
- ++.+++.|+. -..+.+||+.+.+....- .....-.+++. -++++++.|+. + .+.+||+.+.+
T Consensus 157 -~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 157 -H-NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp -E-TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred -E-CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 2 6677777764 245999999987655442 22111122222 25666666652 1 27788877654
No 343
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=65.47 E-value=69 Score=32.49 Aligned_cols=92 Identities=14% Similarity=0.105 Sum_probs=49.5
Q ss_pred eEEEEeCCCCC---CCCCCCC--eEEEEECCCCCeEEEEeCC------CeEEEEECCCCeEEEE--EccCCCCcEEEEEc
Q 004217 92 SLHHLRPKYCP---LSPPPRS--TIAAAFSPDGKTLASTHGD------HTVKIIDCQTGSCLKV--LHGHRRTPWVVRFH 158 (767)
Q Consensus 92 sIrlWd~~t~~---L~gH~~s--VtsVaFSpDG~~LASgs~D------GtVrVWDl~tg~~l~~--L~gH~~~V~sLafs 158 (767)
.+.++|..+.+ +...... -.+++. .++++++.|+.+ ..+.+||..+.+-... +.........+.+
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 205 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH- 205 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred eEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-
Confidence 47788887652 1111111 112222 367777777642 3589999988763322 1111111222333
Q ss_pred cCCCcEEEEEeCC-----CeEEEEECCCCeEEEe
Q 004217 159 PLNPTIIASGSLD-----HEVRLWNASTAECIGS 187 (767)
Q Consensus 159 P~dg~lLaSgS~D-----GtVrIWDl~tg~~i~~ 187 (767)
++++++.|+.+ ..+.+||+.+.+....
T Consensus 206 --~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 237 (318)
T 2woz_A 206 --KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM 237 (318)
T ss_dssp --TTEEEEEEEEETTEEEEEEEEEETTTCCEEEC
T ss_pred --CCEEEEEcCcCCCCccceEEEEECCCCeEEEC
Confidence 56778877654 3577899988765443
No 344
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=65.08 E-value=4.7 Score=43.35 Aligned_cols=107 Identities=12% Similarity=0.030 Sum_probs=66.2
Q ss_pred CeEEEEeCCCeEEEEECCCCeEEEEEccC-CCCcEEEEEc--cCCCcEEEEE-eCCCeEEEEECCCCeEEEeec-----C
Q 004217 120 KTLASTHGDHTVKIIDCQTGSCLKVLHGH-RRTPWVVRFH--PLNPTIIASG-SLDHEVRLWNASTAECIGSRD-----F 190 (767)
Q Consensus 120 ~~LASgs~DGtVrVWDl~tg~~l~~L~gH-~~~V~sLafs--P~dg~lLaSg-S~DGtVrIWDl~tg~~i~~l~-----h 190 (767)
.+++.++.||.|.-+|.++|+.+.+++.. ..++....-. +.++..++.. +.||.|..+|..+|.....+. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888999999999999999999988754 1233221110 1122333333 689999999999886554432 2
Q ss_pred CCCeEE---EEE-cC----CCCEEEEEE-CCcEEEEEcCCCcccc
Q 004217 191 YRPIAS---IAF-HA----SGELLAVAS-GHKLYIWRYNMREETS 226 (767)
Q Consensus 191 ~~~Vts---Vaf-SP----dG~~LAsgS-dd~V~VWDl~t~~~~~ 226 (767)
..++.. ... .+ .+..+++|+ ++++...|+++++.+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEE
Confidence 222221 001 00 334556666 4559999999998765
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=63.62 E-value=1.2e+02 Score=36.94 Aligned_cols=37 Identities=22% Similarity=0.320 Sum_probs=31.8
Q ss_pred CcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEee
Q 004217 151 TPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSR 188 (767)
Q Consensus 151 ~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l 188 (767)
.+.++...+ +..++++-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 456677777 7789999999999999999999998874
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=61.86 E-value=1e+02 Score=35.83 Aligned_cols=131 Identities=15% Similarity=0.175 Sum_probs=74.0
Q ss_pred CeEEEEeCCCCC---CC--------CCCCCeEEEEECC-CCCeEEEEeCC------CeEEEEECCCCeEEEE--EccCCC
Q 004217 91 ESLHHLRPKYCP---LS--------PPPRSTIAAAFSP-DGKTLASTHGD------HTVKIIDCQTGSCLKV--LHGHRR 150 (767)
Q Consensus 91 gsIrlWd~~t~~---L~--------gH~~sVtsVaFSp-DG~~LASgs~D------GtVrVWDl~tg~~l~~--L~gH~~ 150 (767)
..+.+||..+.+ +. .....-.+++... ++++++.|+.+ ..+.+||..+.+-... +.....
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~ 491 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF 491 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc
Confidence 457777776652 11 1122223333333 77788888754 3588999988653321 111111
Q ss_pred CcEEEEEccCCCcEEEEEeCCC--eEEEEECCCCeEEEeec------CCCCeEEEEEcCC-CCEEEEEEC--------Cc
Q 004217 151 TPWVVRFHPLNPTIIASGSLDH--EVRLWNASTAECIGSRD------FYRPIASIAFHAS-GELLAVASG--------HK 213 (767)
Q Consensus 151 ~V~sLafsP~dg~lLaSgS~DG--tVrIWDl~tg~~i~~l~------h~~~VtsVafSPd-G~~LAsgSd--------d~ 213 (767)
. .++.... ++.+++.|+.++ .+.+||..+.+....-. .......+.+..+ +++++.|+. +.
T Consensus 492 ~-h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~ 569 (695)
T 2zwa_A 492 R-HSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDK 569 (695)
T ss_dssp S-CEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCE
T ss_pred c-ceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCc
Confidence 1 2233323 678888887655 69999999877554321 1122233555655 666666652 22
Q ss_pred EEEEEcCCCc
Q 004217 214 LYIWRYNMRE 223 (767)
Q Consensus 214 V~VWDl~t~~ 223 (767)
+.+||+.+..
T Consensus 570 v~~yd~~~~~ 579 (695)
T 2zwa_A 570 AIIFKYDAEN 579 (695)
T ss_dssp EEEEEECTTC
T ss_pred EEEEEccCCc
Confidence 8999988776
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=58.47 E-value=94 Score=36.11 Aligned_cols=132 Identities=15% Similarity=0.123 Sum_probs=73.5
Q ss_pred eEEEEeCCCCC---CC--CCCCCeEEEEECCCCCeEEEEeCCC--eEEEEECCCCeEEEEE-----ccCCCCcEEEEEcc
Q 004217 92 SLHHLRPKYCP---LS--PPPRSTIAAAFSPDGKTLASTHGDH--TVKIIDCQTGSCLKVL-----HGHRRTPWVVRFHP 159 (767)
Q Consensus 92 sIrlWd~~t~~---L~--gH~~sVtsVaFSpDG~~LASgs~DG--tVrVWDl~tg~~l~~L-----~gH~~~V~sLafsP 159 (767)
.+.+||..+.+ +. .....-.+++.-.++++++.|+.++ .+.+||..+.+-...- .........+.+..
T Consensus 469 dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~ 548 (695)
T 2zwa_A 469 DNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDP 548 (695)
T ss_dssp CCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEET
T ss_pred cEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeC
Confidence 47888887742 11 1122223334334788888888755 6999999887633211 11122233455665
Q ss_pred CCCcEEEEEeC--C-----CeEEEEECCCCe------EEEeec---CCCCeEEEEEcCCCCEEEEEEC---------CcE
Q 004217 160 LNPTIIASGSL--D-----HEVRLWNASTAE------CIGSRD---FYRPIASIAFHASGELLAVASG---------HKL 214 (767)
Q Consensus 160 ~dg~lLaSgS~--D-----GtVrIWDl~tg~------~i~~l~---h~~~VtsVafSPdG~~LAsgSd---------d~V 214 (767)
.++.+++.|+. + +.+.+||+.+.+ ...... ....-.+++...++++++.|+. +.|
T Consensus 549 ~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v 628 (695)
T 2zwa_A 549 VSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSI 628 (695)
T ss_dssp TTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSE
T ss_pred CCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeE
Confidence 23678888876 2 468999998876 222111 1111122333333677777762 228
Q ss_pred EEEEcCCCc
Q 004217 215 YIWRYNMRE 223 (767)
Q Consensus 215 ~VWDl~t~~ 223 (767)
.+||+.+.+
T Consensus 629 ~~yd~~t~~ 637 (695)
T 2zwa_A 629 ISLDPLSET 637 (695)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCe
Confidence 889887664
No 348
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=56.18 E-value=2e+02 Score=30.15 Aligned_cols=70 Identities=10% Similarity=-0.007 Sum_probs=37.2
Q ss_pred CCeEEEEECC-CCCeEEEEeCCC----eEEEEECCCCeEEEEEcc--------------CCCCcEEEEEccCC-CcEEEE
Q 004217 108 RSTIAAAFSP-DGKTLASTHGDH----TVKIIDCQTGSCLKVLHG--------------HRRTPWVVRFHPLN-PTIIAS 167 (767)
Q Consensus 108 ~sVtsVaFSp-DG~~LASgs~DG----tVrVWDl~tg~~l~~L~g--------------H~~~V~sLafsP~d-g~lLaS 167 (767)
..|.+|++.| +...|..+...+ .|...+ +.|+....+.. ....|.++++.|.+ .+.+..
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 4699999998 444455555444 344332 33433222221 11247788898743 455555
Q ss_pred EeCCCeEEEEE
Q 004217 168 GSLDHEVRLWN 178 (767)
Q Consensus 168 gS~DGtVrIWD 178 (767)
+..++.|...+
T Consensus 134 g~~~ggl~~S~ 144 (394)
T 3b7f_A 134 GTSPQGLFRST 144 (394)
T ss_dssp EEETTEEEEES
T ss_pred EecCCcEEEEc
Confidence 55566555543
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=52.04 E-value=68 Score=37.10 Aligned_cols=103 Identities=10% Similarity=0.117 Sum_probs=62.3
Q ss_pred CCcEEEEEccCCCcEEEE-EeCCCeEEEEECCC------CeE-------EEeecCCCCeEEEEEcCCCCEEEEEE--CCc
Q 004217 150 RTPWVVRFHPLNPTIIAS-GSLDHEVRLWNAST------AEC-------IGSRDFYRPIASIAFHASGELLAVAS--GHK 213 (767)
Q Consensus 150 ~~V~sLafsP~dg~lLaS-gS~DGtVrIWDl~t------g~~-------i~~l~h~~~VtsVafSPdG~~LAsgS--dd~ 213 (767)
.....+.++| ++++++. |-.+.+|.++|+++ ++. ....+..-.....+|+++| ...+.- +..
T Consensus 323 ksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSq 400 (638)
T 3sbq_A 323 KNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQ 400 (638)
T ss_dssp SSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTE
T ss_pred CCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecce
Confidence 4456788999 6665555 55689999999884 221 2233445566789999999 444444 455
Q ss_pred EEEEEcCCC------ccccCC-eEEecCCCCeEEEEE------ccCCCeEEEEEe
Q 004217 214 LYIWRYNMR------EETSSP-RIVLRTRRSLRAVHF------HPHAAPLLLTAE 255 (767)
Q Consensus 214 V~VWDl~t~------~~~~~~-~~l~~h~~~VtsVaF------SPDG~~LlaSgs 255 (767)
|..|++... +..... ..+.-| ..+-.+.- .|||++|++..+
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~-YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVH-YQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECS-SCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred EEEEeccHHHHHhcCccCCeeeeccccc-cCCcccccCCCccCCCCccEEEEecc
Confidence 999998753 211111 112222 23333333 579998877665
No 350
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=51.85 E-value=45 Score=42.70 Aligned_cols=120 Identities=14% Similarity=0.160 Sum_probs=82.5
Q ss_pred CCeEEEEECCCCeEEEEEccCCCCcEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecCCCCeEEEEEcCCCCEEE
Q 004217 128 DHTVKIIDCQTGSCLKVLHGHRRTPWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDFYRPIASIAFHASGELLA 207 (767)
Q Consensus 128 DGtVrVWDl~tg~~l~~L~gH~~~V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~~~VtsVafSPdG~~LA 207 (767)
...|.|.|+.++..+..- .-.--+.-.+| ..+.++-= ...++.|||+.+.+.++.+.....|..-.|-.+ +.|+
T Consensus 47 ~~~vvIidl~~~~~~~rr---pi~AdsAIMnP-~~~iiALr-ag~~lQiFnl~~k~klks~~~~e~VvfWkWis~-~~l~ 120 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRR---PISADSAIMNP-ASKVIALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVA 120 (1630)
T ss_pred CceEEEEECCCCCCcccc---cccchhhccCC-CcceEEEe-cCCeEEEeehHHhhhhcccccCCCceEEEecCC-CeeE
Confidence 347888998876543111 11112334788 66666654 378999999999999998888888888888644 5677
Q ss_pred EEECCcEEEEEcCCCccccCCeEEecC----CCCeEEEEEccCCCeEEEEEe
Q 004217 208 VASGHKLYIWRYNMREETSSPRIVLRT----RRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 208 sgSdd~V~VWDl~t~~~~~~~~~l~~h----~~~VtsVaFSPDG~~LlaSgs 255 (767)
..++..|+-|++..... +...+..| ...|..-..+++.+|++..|=
T Consensus 121 lVT~~aVyHW~~~~~s~--P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi 170 (1630)
T 1xi4_A 121 LVTDNAVYHWSMEGESQ--PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI 170 (1630)
T ss_pred EEcCCeEEEeccCCCCc--cHHHHhcchhcccCeeEEeeeCCCCCeEEEEee
Confidence 77778899999965332 11223333 467888889999999887763
No 351
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=49.16 E-value=12 Score=33.81 Aligned_cols=17 Identities=29% Similarity=0.708 Sum_probs=12.1
Q ss_pred chhhhhh-HhhhccceeE
Q 004217 637 GTVLTSR-AIRAAHCLTS 653 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~ 653 (767)
|.++..+ .++||||+..
T Consensus 29 GsLIs~~~VLTAAHC~~~ 46 (131)
T 1yph_C 29 GSLINENWVVTAAHCGVT 46 (131)
T ss_dssp EEEEETTEEEECGGGCCC
T ss_pred EEEeeCCEEEECHHHCCC
Confidence 4455555 7899999864
No 352
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=46.47 E-value=7.2 Score=38.73 Aligned_cols=76 Identities=17% Similarity=0.319 Sum_probs=40.4
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---ecCcEEEEeecCCC--
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---VSDMELVRVLPSAE-- 710 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-- 710 (767)
|.++..+ .++||||+..-...+..-.+.+|.-.+.. ...+.....+.|.+++. -.|+.|++.-....
T Consensus 26 GtLI~~~~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~-------~~~~~~~~~~~v~~i~~hp~~~DiALl~L~~~v~~~ 98 (234)
T 2asu_B 26 GSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNP-------QHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLN 98 (234)
T ss_dssp EEEEETTEEEEEGGGSSCTTCCCTTCEEEESCSBSSC-------CTTCTTCEEEEEEEEEECSTTCCEEEEEESSCCCCS
T ss_pred EEEEeCCEEEECHHHcCCCCCCcccEEEEEeeeeccC-------CCCCCceEEEEEEEEecCCCCCCeEEEEeCCcCcCC
Confidence 4555555 78999998654333444444444222211 11123345566666654 25888888543332
Q ss_pred CceeeeEec
Q 004217 711 DEVNVACFH 719 (767)
Q Consensus 711 ~~~~~~~~~ 719 (767)
+.|.-+|.-
T Consensus 99 ~~v~picLp 107 (234)
T 2asu_B 99 QRVALICLP 107 (234)
T ss_dssp SSSCCCBCC
T ss_pred CcEeccCCC
Confidence 356666664
No 353
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=43.66 E-value=5.2e+02 Score=33.35 Aligned_cols=136 Identities=7% Similarity=0.014 Sum_probs=80.2
Q ss_pred CCeEEEEeCCCC--C---CCCC----CCCeEEEEECCCCCeEEEEe-------CCCeEEEEECCCCeEEEEEccCCCCcE
Q 004217 90 AESLHHLRPKYC--P---LSPP----PRSTIAAAFSPDGKTLASTH-------GDHTVKIIDCQTGSCLKVLHGHRRTPW 153 (767)
Q Consensus 90 DgsIrlWd~~t~--~---L~gH----~~sVtsVaFSpDG~~LASgs-------~DGtVrVWDl~tg~~l~~L~gH~~~V~ 153 (767)
+..|..|++... + +.-| ...|..-..+++.++++..+ -.|.+.+|.++.+. .+.+.||.+...
T Consensus 124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~ 202 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFA 202 (1630)
T ss_pred CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhh
Confidence 567888988532 1 1122 34578888899999887544 25889999887543 455677776554
Q ss_pred EEEEc--cCCCcEEEEEeC---CCeEEEEECCCC---e-EEE-----e-ec---CCCCeEEEEEcCCCCEEEEEECCc-E
Q 004217 154 VVRFH--PLNPTIIASGSL---DHEVRLWNASTA---E-CIG-----S-RD---FYRPIASIAFHASGELLAVASGHK-L 214 (767)
Q Consensus 154 sLafs--P~dg~lLaSgS~---DGtVrIWDl~tg---~-~i~-----~-l~---h~~~VtsVafSPdG~~LAsgSdd~-V 214 (767)
.+... +....+++.+.. .+.++|-++... . ... . +. ..+-..++..++.-..+..-+..+ |
T Consensus 203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~ 282 (1630)
T 1xi4_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 282 (1630)
T ss_pred eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceE
Confidence 44442 212234443332 368888888543 1 110 0 11 112223456666666666666545 9
Q ss_pred EEEEcCCCcccc
Q 004217 215 YIWRYNMREETS 226 (767)
Q Consensus 215 ~VWDl~t~~~~~ 226 (767)
+++|+.++..+-
T Consensus 283 ~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 283 HLYDLETGTCIY 294 (1630)
T ss_pred EEEecccchhhh
Confidence 999999997644
No 354
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=42.22 E-value=12 Score=37.13 Aligned_cols=67 Identities=24% Similarity=0.443 Sum_probs=36.7
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE-------------------
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR------------------- 696 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 696 (767)
|.++..+ .++||||+. ..+.+-+|....+ ..+....++.|.+++.
T Consensus 28 GsLIs~~~VLTAAHC~~--------~~~~v~~G~~~~~-------~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~ 92 (237)
T 1gvz_A 28 GVLVHPQWVLTAAHCMS--------DDYQIWLGRHNLS-------KDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDD 92 (237)
T ss_dssp EEEEETTEEEECGGGCC--------SSCEEEESCSBTT-------SCCTTCEEECEEEEEECTTSCGGGGGCSSCCTTSC
T ss_pred eEEeeCCEEEEcHHhCC--------CCCeEEEeecccc-------cCCCCceEEEeeeEecCCccCcccccccccccccc
Confidence 5666655 789999985 2333444443321 1122234566666654
Q ss_pred -ecCcEEEEeecCCC--CceeeeEe
Q 004217 697 -VSDMELVRVLPSAE--DEVNVACF 718 (767)
Q Consensus 697 -~~~~~~~~~~~~~~--~~~~~~~~ 718 (767)
..|+.|++.-.... +.|..+|.
T Consensus 93 ~~~DIALl~L~~~~~~~~~v~picL 117 (237)
T 1gvz_A 93 ISHDLMLLRLAQPARITDAVKILDL 117 (237)
T ss_dssp CTTCCEEEEESSCCCCBTTBCCCCC
T ss_pred cCCceEEEEeCCCcccCCcEeeeEC
Confidence 46888888643332 34555555
No 355
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=37.00 E-value=4.3e+02 Score=30.99 Aligned_cols=143 Identities=11% Similarity=0.050 Sum_probs=74.8
Q ss_pred CCCeEEEEECCC-CCeEEEEeCCCeEEEEECCCCeEEEEEccC-------CCCcEEEEEccCCCcEEEEEeCCCe----E
Q 004217 107 PRSTIAAAFSPD-GKTLASTHGDHTVKIIDCQTGSCLKVLHGH-------RRTPWVVRFHPLNPTIIASGSLDHE----V 174 (767)
Q Consensus 107 ~~sVtsVaFSpD-G~~LASgs~DGtVrVWDl~tg~~l~~L~gH-------~~~V~sLafsP~dg~lLaSgS~DGt----V 174 (767)
.+.|.+|+++|+ ...++.+...+.|...+ +.|+.-..+..+ ...|.+|+++|.+.+.++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 457999999994 56677777777776665 445544444332 2468999999854455554443211 2
Q ss_pred EEEE-CCCCeEEEeecC--------C--CCeEEEEEcCCC-CEEEEEECCcEEEEEcCC-CccccCCeEEe------cCC
Q 004217 175 RLWN-ASTAECIGSRDF--------Y--RPIASIAFHASG-ELLAVASGHKLYIWRYNM-REETSSPRIVL------RTR 235 (767)
Q Consensus 175 rIWD-l~tg~~i~~l~h--------~--~~VtsVafSPdG-~~LAsgSdd~V~VWDl~t-~~~~~~~~~l~------~h~ 235 (767)
.||- ...|+--..+.. . ..+..++++|.. ..+..+.... .||-... ++... ... ...
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~-gl~~S~DgG~TW~---~~~~~~~~~~~~ 168 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTE-GIWKSSDRAKTWT---NVTSIPDAFTNG 168 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSS-CEEEESSTTSSCE---EETTSCCCCSTT
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccC-CEEEECCCCcccC---CCccCccccCCC
Confidence 3332 333433222211 1 135568888753 4555555222 1333322 22211 111 112
Q ss_pred CCeEEEEEccCC-CeEEEEE
Q 004217 236 RSLRAVHFHPHA-APLLLTA 254 (767)
Q Consensus 236 ~~VtsVaFSPDG-~~LlaSg 254 (767)
..+..|.++|.. ..++++.
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~ 188 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASA 188 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEE
T ss_pred CCeEEEEECCCCCCEEEEEE
Confidence 457889998853 3454443
No 356
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=36.93 E-value=21 Score=35.13 Aligned_cols=68 Identities=22% Similarity=0.377 Sum_probs=36.9
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (767)
|.++..+ .++||||+.. .+.+-+|.... .+.+.....+.|.+++. ..|+.|++.-
T Consensus 31 GsLI~~~~VLTAAHC~~~--------~~~v~~G~~~~-------~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (227)
T 1euf_A 31 GFLVREDFVLTAAHCLGS--------SINVTLGAHNI-------MERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLT 95 (227)
T ss_dssp EEEEETTEEEECGGGCCE--------EEEEEESCSBT-------TSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEeeCCEEEECHHHCCC--------CcEEEEccccc-------CCCCCccEEEEEEEEEeCCCCCCCCCcCceEEEEEC
Confidence 4555555 7899999964 13333444322 11222345566666654 2588888863
Q ss_pred cCCC--CceeeeEec
Q 004217 707 PSAE--DEVNVACFH 719 (767)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (767)
.... +.|.-+|.-
T Consensus 96 ~~~~~~~~v~picLp 110 (227)
T 1euf_A 96 RKADITDKVSPINLP 110 (227)
T ss_dssp SCCCCCSSCCCCCCC
T ss_pred CcCcCCCceeccCCC
Confidence 3322 345556653
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=36.78 E-value=1.2e+02 Score=37.39 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=30.9
Q ss_pred cEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeec
Q 004217 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRD 189 (767)
Q Consensus 152 V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~ 189 (767)
+.++...+ +..++++-+.|+++|+||+.+++++.+..
T Consensus 240 ~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44455566 77899999999999999999999998854
No 358
>1vqy_A Hypothetical protein AGR_PAT_315; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.40A {Agrobacterium tumefaciens str} SCOP: d.58.4.13
Probab=36.69 E-value=15 Score=32.99 Aligned_cols=21 Identities=33% Similarity=0.559 Sum_probs=18.2
Q ss_pred ceEEEEEEEEeecccccchhh
Q 004217 620 HQVIYELRIYSLEEATFGTVL 640 (767)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~ 640 (767)
|.+|||||.|.|..++..+.+
T Consensus 11 ~~~~yElRtY~i~Pg~~~~f~ 31 (116)
T 1vqy_A 11 HHMIVEERIYRIRGGKMQEYL 31 (116)
T ss_dssp -CCEEEEEEEEECTTCHHHHH
T ss_pred ceeEEEEEEEEEcCCCHHHHH
Confidence 689999999999999888776
No 359
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=36.58 E-value=24 Score=35.07 Aligned_cols=72 Identities=15% Similarity=0.252 Sum_probs=37.5
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (767)
|.++..+ .++||||+..- .....+.+-+|.... ...+....+++|.+++.- .|+.|++.-
T Consensus 28 GtLI~~~~VLTAAhC~~~~---~~~~~~~v~~g~~~~-------~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 97 (261)
T 3gyl_B 28 GSLVSEQWVLSAAHCFPSE---HHKEAYEVKLGAHQL-------DSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLS 97 (261)
T ss_dssp EEECSSSEEEECGGGSCTT---SCGGGEEEEESCSBT-------TSCCSSCEEECEEEEEECTTCCSTTCSCCCEEEEES
T ss_pred EEEEcCCEEEECHHHCCCC---CCcccEEEEeCceec-------cCCCCCceEEEEEEEEECCCcCCCCCCCcEEEEEEC
Confidence 5555555 78999998531 112233344444332 111223345566666543 388888863
Q ss_pred cCCC--CceeeeEe
Q 004217 707 PSAE--DEVNVACF 718 (767)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (767)
.... +.|.-+|.
T Consensus 98 ~~v~~~~~v~picL 111 (261)
T 3gyl_B 98 RPITFSRYIRPISL 111 (261)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CCccCCCceeccCC
Confidence 3322 34555665
No 360
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=34.99 E-value=24 Score=34.70 Aligned_cols=72 Identities=15% Similarity=0.393 Sum_probs=37.7
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEE-----------EecCcEEEE
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVY-----------RVSDMELVR 704 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 704 (767)
|.++..+ .++||||+... +..+.+.+-+|.....- .+.....+.|.+++ .-.|+.|++
T Consensus 33 GtLI~~~~VLTAAHC~~~~---~~~~~~~v~~g~~~~~~-------~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~ 102 (247)
T 3mhw_U 33 GSLISPCWVISATHCFIDY---PKKEDYIVYLGRSRLNS-------NTQGEMKFEVENLILHKDYSADTLAHHNDIALLK 102 (247)
T ss_dssp EEEEETTEEEECGGGTTTS---CCGGGEEEEESCCBSSS-------CCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEE
T ss_pred EEEEeCCEEEEcHHhCcCC---CCCccEEEEeccccccC-------CCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEE
Confidence 6666666 78999998642 12334445555433211 11122334455443 235888888
Q ss_pred eecC------CCCceeeeEe
Q 004217 705 VLPS------AEDEVNVACF 718 (767)
Q Consensus 705 ~~~~------~~~~~~~~~~ 718 (767)
.-.. ..+.|.-+|.
T Consensus 103 L~~~~~~~~~~~~~v~pi~l 122 (247)
T 3mhw_U 103 IRSKEGRCAQPSRTIQTISL 122 (247)
T ss_dssp EECTTSCCCCCBTTBCCCBC
T ss_pred eCCccccccccCCccccccc
Confidence 5322 2345666665
No 361
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=34.04 E-value=26 Score=34.05 Aligned_cols=68 Identities=21% Similarity=0.311 Sum_probs=36.5
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (767)
|.++..+ .++||||+. +.+.+-+|..... ..+.....+.|.+++.- .|+.|++.-
T Consensus 32 GtLI~~~~VLTAAhC~~--------~~~~v~~g~~~~~-------~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~ 96 (224)
T 3rp2_A 32 GFLISRQFVLTAAHCKG--------REITVILGAHDVR-------KRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLE 96 (224)
T ss_dssp EEESSSSEEEECGGGCC--------SEEEEEESCSBTT-------SCCTTCEEEEEEEEEECTTCCSSSCCSCCEEEEES
T ss_pred eEEeeCCEEEEchhcCC--------CCcEEEEeccccC-------cCCCCcEEEEEEEEEECCCccCCCCCccEEEEEcC
Confidence 5555555 789999973 2334444443321 11223345556665542 488888853
Q ss_pred cCCC--CceeeeEec
Q 004217 707 PSAE--DEVNVACFH 719 (767)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (767)
.... +.|+.+|..
T Consensus 97 ~~~~~~~~v~pi~l~ 111 (224)
T 3rp2_A 97 KKVELTPAVNVVPLP 111 (224)
T ss_dssp SCCCCBTTBCCCCCC
T ss_pred CCcccCCcccceecC
Confidence 3222 456666653
No 362
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=32.82 E-value=26 Score=34.29 Aligned_cols=68 Identities=24% Similarity=0.330 Sum_probs=37.2
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (767)
|.++..+ .++||||+.. .+.+-+|..... ..+.....+.|.+++. -.|+.|++.-
T Consensus 31 GsLI~~~~VLTAAHC~~~--------~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (224)
T 1cgh_A 31 GFLVREDFVLTAAHCWGS--------NINVTLGAHNIQ-------RRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLS 95 (224)
T ss_dssp EEEEETTEEEECGGGCCS--------SEEEEESCSBTT-------SCCTTCEEEEEEEEEECTTCBTTTTBSCCEEEEES
T ss_pred EEEeeCCEEEEhHHhCCC--------CCEEEEeecccC-------CCCCccEEEEEEEEEcCCCCCCCCCcCCEEEEEEC
Confidence 4555555 7899999853 233344443221 1122335566666654 2488888853
Q ss_pred cCCC--CceeeeEec
Q 004217 707 PSAE--DEVNVACFH 719 (767)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (767)
.... +.|.-+|.-
T Consensus 96 ~~v~~~~~v~picLp 110 (224)
T 1cgh_A 96 RRVRRNRNVNPVALP 110 (224)
T ss_dssp SCCCCBTTBCCCBCC
T ss_pred CCCcCCCceEeeECC
Confidence 3332 356666763
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=32.37 E-value=33 Score=42.48 Aligned_cols=37 Identities=22% Similarity=0.368 Sum_probs=31.9
Q ss_pred CeEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEE
Q 004217 109 STIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVL 145 (767)
Q Consensus 109 sVtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L 145 (767)
.+.+++..++.++|++-+.|+++||||+.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4556677778899999999999999999999998775
No 364
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=31.83 E-value=17 Score=36.04 Aligned_cols=74 Identities=16% Similarity=0.178 Sum_probs=38.9
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---ecCcEEEEeecCCC--
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---VSDMELVRVLPSAE-- 710 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-- 710 (767)
|.++..+ .++||||+.... +. .+.+-+|.....- ...+....++.|.+++. -.|+.|++.-....
T Consensus 27 GtLIs~~~VLTAAHC~~~~~--~~--~~~v~~G~~~~~~-----~~~~~~~~~~~v~~~~~~p~~~DiALl~L~~~v~~~ 97 (240)
T 1si5_H 27 GSLIKESWVLTARQCFPSRD--LK--DYEAWLGIHDVHG-----RGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLD 97 (240)
T ss_dssp EEEEETTEEEEEGGGCSSSC--GG--GEEEEESCSBSSC-----STTTTTCEEEEEEEEEECSSTTCEEEEEESSCCCCS
T ss_pred EEEeeCCEEEEhHHhcCCCC--Cc--cEEEEEeeeecCC-----CCCCCcceEEEEEEEEcCCCCCcEEEEEECCccccC
Confidence 4445554 789999986532 22 3334444432210 11122344566666653 35899988643332
Q ss_pred CceeeeEec
Q 004217 711 DEVNVACFH 719 (767)
Q Consensus 711 ~~~~~~~~~ 719 (767)
+.|.-+|..
T Consensus 98 ~~v~picLp 106 (240)
T 1si5_H 98 DFVSTIDLP 106 (240)
T ss_dssp SSCCCCBCC
T ss_pred CceeccCcC
Confidence 356666653
No 365
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=31.36 E-value=25 Score=34.34 Aligned_cols=72 Identities=19% Similarity=0.330 Sum_probs=35.2
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE--------ecCcEEEEeec
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR--------VSDMELVRVLP 707 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 707 (767)
|.++..+ .++||||+... .|. .+.+-+|..... ...+.....+.|.+++. ..|+.|++.-.
T Consensus 28 GtLI~~~~VLTAAHC~~~~--~~~--~~~V~~G~~~~~------~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~ 97 (225)
T 1a7s_A 28 GALIHARFVMTAASCFQSQ--NPG--VSTVVLGAYDLR------RRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDR 97 (225)
T ss_dssp EEEEETTEEEECGGGC------CC--SEEEEESCSSTT------SCCTTTCEEEEEEEEECSSCBTTTTBSCCEEEEESS
T ss_pred EEEeeCCEEEEchhccCCC--CCC--ceEEEEeeeECC------CCCCcceeEEeEEEEecccccCCCCcCCEEEEEcCC
Confidence 4555555 78999999762 222 333344433221 01111225566666654 25888888533
Q ss_pred CCC--CceeeeEe
Q 004217 708 SAE--DEVNVACF 718 (767)
Q Consensus 708 ~~~--~~~~~~~~ 718 (767)
... +.|..+|.
T Consensus 98 ~~~~~~~v~pi~L 110 (225)
T 1a7s_A 98 EANLTSSVTILPL 110 (225)
T ss_dssp CCCCBTTBCCCCC
T ss_pred cccCCCceeEEEc
Confidence 322 24555554
No 366
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=30.88 E-value=29 Score=33.86 Aligned_cols=67 Identities=21% Similarity=0.372 Sum_probs=36.1
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (767)
|.++..+ .++||||+. +.+.+-+|.... .+.+.....+.|.+++.- .|+.|++.-
T Consensus 32 GtLI~~~~VLTAAhC~~--------~~~~v~~G~~~~-------~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~ 96 (226)
T 4ag1_A 32 GFLIRRNFVLTAAHCAG--------RSITVTLGAHNI-------TEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLK 96 (226)
T ss_dssp EEEEETTEEEECGGGCC--------SEEEEEESCSBT-------TSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEEeCCEEEECcccCC--------CCeEEEeCCccc-------CCCCCcceEEEEEEEEeCCCCCCCCCcCcEEEEEEC
Confidence 5555555 789999983 234444554332 112233345666666542 488888853
Q ss_pred cCC--CCceeeeEe
Q 004217 707 PSA--EDEVNVACF 718 (767)
Q Consensus 707 ~~~--~~~~~~~~~ 718 (767)
... .+.|..+|.
T Consensus 97 ~~~~~~~~v~pi~l 110 (226)
T 4ag1_A 97 EKASLTLAVGTLPF 110 (226)
T ss_dssp SCCCCCSSSCCCCC
T ss_pred CCCccCCceecccc
Confidence 222 234445554
No 367
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=30.85 E-value=52 Score=35.18 Aligned_cols=66 Identities=14% Similarity=0.090 Sum_probs=44.1
Q ss_pred eCCCeEEEEECCCCeEEEEEcc----CCCCcEE---EEE-cc---CCCcEEEEEeCCCeEEEEECCCCeEEEeecCC
Q 004217 126 HGDHTVKIIDCQTGSCLKVLHG----HRRTPWV---VRF-HP---LNPTIIASGSLDHEVRLWNASTAECIGSRDFY 191 (767)
Q Consensus 126 s~DGtVrVWDl~tg~~l~~L~g----H~~~V~s---Laf-sP---~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h~ 191 (767)
..||.|..+|..+|.....+.. ...++.. ... .+ ..+..+++|+.++.+...|+++|+.+..+...
T Consensus 64 ~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 64 FGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp STTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred CCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 5799999999988865544421 1111111 000 00 03567889999999999999999999997644
No 368
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=30.69 E-value=34 Score=33.52 Aligned_cols=68 Identities=19% Similarity=0.313 Sum_probs=36.0
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (767)
|.++..+ .++||||+. ..+.+-+|...... .+.....+.|.+++. -.|+.|++.-
T Consensus 27 GsLIs~~~VLTAAHC~~--------~~~~v~~G~~~~~~-------~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 91 (222)
T 1hj8_A 27 GSLVNENWVVSAAHCYK--------SRVEVRLGEHNIKV-------TEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLS 91 (222)
T ss_dssp EEEEETTEEEECGGGCC--------SSCEEEESCSBTTS-------CCSCCEEEEEEEEEECTTCBTTTTBSCCEEEEES
T ss_pred eEEecCCEEEECHHhcC--------CCeEEEEccccccc-------CCCCcEEEEEEEEEECCCCCCCCCCCcEEEEEEC
Confidence 4555555 789999985 12233334332211 112234566777654 3588888853
Q ss_pred cCCC--CceeeeEec
Q 004217 707 PSAE--DEVNVACFH 719 (767)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (767)
.... +.|.-+|..
T Consensus 92 ~~~~~~~~v~picL~ 106 (222)
T 1hj8_A 92 KPATLNTYVQPVALP 106 (222)
T ss_dssp SCCCCSSSCCCCBCC
T ss_pred CcccCCCceeccCCC
Confidence 3322 346666653
No 369
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=30.50 E-value=19 Score=35.53 Aligned_cols=70 Identities=23% Similarity=0.374 Sum_probs=37.9
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE-----------ecCcEEEE
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR-----------VSDMELVR 704 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 704 (767)
|.++..+ .++||||+.. + ..+.+-+|..... ..+...+.+.|.+++. -.|+.|++
T Consensus 32 GtLIs~~~VLTAAHC~~~----~--~~~~V~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiALl~ 98 (236)
T 1elt_A 32 GSLIRQGWVMTAAHCVDS----A--RTWRVVLGEHNLN-------TNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLR 98 (236)
T ss_dssp EEEEETTEEEECHHHHSS----C--CCEEEEESCSBTT-------SCCSCCEEECEEEEEECTTCCTTCGGGCCCCEEEE
T ss_pred EEEEeCCEEEECHHhhCC----c--CceEEEEccccCC-------CCCCCcEEEEEEEEEECCCCCCCCCCCCccEEEEE
Confidence 4555555 8899999864 2 2333444443321 1112234566666654 34888888
Q ss_pred eecCCC--CceeeeEec
Q 004217 705 VLPSAE--DEVNVACFH 719 (767)
Q Consensus 705 ~~~~~~--~~~~~~~~~ 719 (767)
.-.... +.|..+|.-
T Consensus 99 L~~~~~~~~~v~picL~ 115 (236)
T 1elt_A 99 LNTQASLNSAVQLAALP 115 (236)
T ss_dssp ESSCCCCSSSCCCCCCC
T ss_pred CCCCCccCCcEEeccCC
Confidence 643322 456667764
No 370
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=30.38 E-value=44 Score=32.43 Aligned_cols=71 Identities=23% Similarity=0.426 Sum_probs=36.7
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE--------ecCcEEEEeec
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR--------VSDMELVRVLP 707 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 707 (767)
|.++..+ .++||||+.... + ..+.+-+|..... ..+.....+.|.+++. ..|+.|++.-.
T Consensus 31 GtLIs~~~VLTAAHC~~~~~--~--~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L~~ 99 (221)
T 1fuj_A 31 GTLIHPSFVLTAAHCLRDIP--Q--RLVNVVLGAHNVR-------TQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSS 99 (221)
T ss_dssp EEEEETTEEEECGGGGSSSC--G--GGEEEEESCSBTT-------SCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEESS
T ss_pred EEEecCCEEEEchHhcCcCC--C--CceEEEEeeeecc-------CCCCceEEEEEEEEEeCCCCCCCCcccEEEEEeCC
Confidence 4555555 889999996522 1 2333444433221 1122344556666654 25888888533
Q ss_pred CCC--CceeeeEe
Q 004217 708 SAE--DEVNVACF 718 (767)
Q Consensus 708 ~~~--~~~~~~~~ 718 (767)
... +.|.-+|.
T Consensus 100 ~~~~~~~v~picL 112 (221)
T 1fuj_A 100 PANLSASVATVQL 112 (221)
T ss_dssp CCCCCSSCCCCBC
T ss_pred ccccCCcceeeEC
Confidence 222 34555555
No 371
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=30.07 E-value=27 Score=34.43 Aligned_cols=17 Identities=29% Similarity=0.790 Sum_probs=12.2
Q ss_pred chhhhhh-HhhhccceeE
Q 004217 637 GTVLTSR-AIRAAHCLTS 653 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~ 653 (767)
|.++..+ .++||||+..
T Consensus 28 GsLIs~~~VLTAAHC~~~ 45 (237)
T 2zch_P 28 GVLVHPQWVLTAAHCIRN 45 (237)
T ss_dssp EEEEETTEEEECGGGCCS
T ss_pred EEEecCCEEEEcHHhcCC
Confidence 4555555 7899999853
No 372
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=29.33 E-value=29 Score=34.02 Aligned_cols=67 Identities=19% Similarity=0.286 Sum_probs=37.3
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (767)
|.++..+ .++||||+.. .+.+-+|..... +.+.....+.|.+++. -.|+.|++.-
T Consensus 31 GtLI~~~~VLTAAHC~~~--------~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (227)
T 1iau_A 31 GFLIRDDFVLTAAHCWGS--------SINVTLGAHNIK-------EQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLE 95 (227)
T ss_dssp EEEEETTEEEECGGGCCS--------EEEEEESCSBTT-------SCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEEcCCEEEECHHhCCC--------ceEEEEcccccc-------CCCCccEEEEEEEEECCCCCCCCCCCCCeEEEEEC
Confidence 5666665 8899999853 133444443321 1122345566776654 2488888853
Q ss_pred cCCC--CceeeeEe
Q 004217 707 PSAE--DEVNVACF 718 (767)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (767)
.... +.|.-+|.
T Consensus 96 ~~~~~~~~v~picL 109 (227)
T 1iau_A 96 RKAKRTRAVQPLRL 109 (227)
T ss_dssp SCCCCBTTBCCCCC
T ss_pred CcccCCCceecccC
Confidence 3322 34666665
No 373
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=29.13 E-value=32 Score=34.04 Aligned_cols=69 Identities=19% Similarity=0.309 Sum_probs=36.3
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE-----------ecCcEEEE
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR-----------VSDMELVR 704 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 704 (767)
|.++..+ .++||||+.. + ..+.+-+|.-... ..+...+.+.|.+++. -.|+.|++
T Consensus 32 GsLI~~~~VLTAAHC~~~----~--~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~ 98 (240)
T 1gvk_B 32 GTLIRQNWVMTAAHCVDR----E--LTFRVVVGEHNLN-------QNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLR 98 (240)
T ss_dssp EEEEETTEEEECGGGGCS----C--CCEEEEESCSBTT-------SCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEEEE
T ss_pred EEEeeCCEEEECHHHCCC----C--cceEEEECCeecc-------cCCCcceEEEEEEEEECCCCCCCCCCCCCcEEEEE
Confidence 4555555 7899999854 2 2233344433221 1112234566666654 34888888
Q ss_pred eecCCC--CceeeeEe
Q 004217 705 VLPSAE--DEVNVACF 718 (767)
Q Consensus 705 ~~~~~~--~~~~~~~~ 718 (767)
.-.... +.|..+|.
T Consensus 99 L~~~v~~~~~v~pi~l 114 (240)
T 1gvk_B 99 LAQSVTLNSYVQLGVL 114 (240)
T ss_dssp ESSCCCCBTTBCCCCC
T ss_pred ECCccccCCCccceec
Confidence 533322 34555665
No 374
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=29.13 E-value=34 Score=34.03 Aligned_cols=69 Identities=22% Similarity=0.475 Sum_probs=36.1
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (767)
|.++..+ .++||||+.. .... +-+|.-... ..+.....+.|.+++. -.|+.|++.-
T Consensus 44 GtLI~~~~VLTAAHC~~~-----~~~~--v~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 109 (245)
T 1t8o_A 44 GSLINENWVVTAAHCGVT-----TSDV--VVAGEFDQG-------SSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLS 109 (245)
T ss_dssp EEEEETTEEEECGGGCCC-----TTSE--EEESCSBTT-------CSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEES
T ss_pred EEEeeCCEEEEcHHhCcC-----CCcE--EEEeeeecC-------CCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEEC
Confidence 4555555 7899999864 2222 333432221 1122334566666654 2588888853
Q ss_pred cCCC--CceeeeEec
Q 004217 707 PSAE--DEVNVACFH 719 (767)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (767)
.... +.|.-+|.-
T Consensus 110 ~~~~~~~~v~picLp 124 (245)
T 1t8o_A 110 TAASFSQTVSAVCLP 124 (245)
T ss_dssp SCCCCBTTBCCCBCC
T ss_pred CCCcCCCceeeeECC
Confidence 3322 346666653
No 375
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=29.09 E-value=24 Score=34.78 Aligned_cols=69 Identities=17% Similarity=0.328 Sum_probs=36.5
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (767)
|.++..+ .++||||+.. ..-.+. +|.... ...+...+++.|.+++. -.|+.|++.-
T Consensus 28 GtLIs~~~VLTAAHC~~~-----~~~~v~--~G~~~~-------~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~ 93 (234)
T 1orf_A 28 GALIAKDWVLTAAHCNLN-----KRSQVI--LGAHSI-------TREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLT 93 (234)
T ss_dssp EEEEETTEEEECTTCCCC-----TTCEEE--ESCSBS-------SSCCTTCEEECEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEeeCCEEEEchhcCCC-----CCceEE--Eecccc-------CcCCCceEEEEEEEEEcCCCCCCCCCCCCEEEEEEC
Confidence 5555555 7899999863 222333 343221 11122234566666654 2588888864
Q ss_pred cCCC--CceeeeEec
Q 004217 707 PSAE--DEVNVACFH 719 (767)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (767)
.... +.|..+|.-
T Consensus 94 ~~~~~~~~v~picLp 108 (234)
T 1orf_A 94 EKAKINKYVTILHLP 108 (234)
T ss_dssp SCCCCSSSSCCCCCC
T ss_pred CcCccCCCeeeeecC
Confidence 3332 345566653
No 376
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=28.83 E-value=39 Score=32.99 Aligned_cols=71 Identities=20% Similarity=0.319 Sum_probs=36.8
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (767)
|.++..+ .++||||+... .|. .+.+-+|.... ...+.....+.|.+++.- .|+.|++.-
T Consensus 28 GtLIs~~~VLTAAHC~~~~--~~~--~~~v~~G~~~~-------~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~ 96 (228)
T 2xw9_A 28 GVLVAEQWVLSAAHCLEDA--ADG--KVQVLLGAHSL-------SQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLS 96 (228)
T ss_dssp EEEEETTEEEECGGGGSSC--TTC--CEEEEESCSBS-------SSCCTTCEEEEEEEEEECTTCCTTCCTTCCEEEEES
T ss_pred EEEEeCCEEEEcHHhCCCC--CCC--ceEEEEccccc-------CCCCCcceEEEEEEEEeCCCCCCCCCCCcEEEEEeC
Confidence 4555555 78999998632 222 33444444322 111222345666666542 478888853
Q ss_pred cCCC--CceeeeEe
Q 004217 707 PSAE--DEVNVACF 718 (767)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (767)
.... +.|.-+|.
T Consensus 97 ~~~~~~~~v~pi~l 110 (228)
T 2xw9_A 97 EKATLGPAVRPLPW 110 (228)
T ss_dssp SCCCCBTTBCCCCB
T ss_pred CCcccCCCeeeccc
Confidence 3332 34555554
No 377
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=28.63 E-value=32 Score=33.92 Aligned_cols=73 Identities=19% Similarity=0.338 Sum_probs=38.7
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (767)
|.++..+ .++||||+... .....+.+-+|.... .+.+...+.+.|.+++.- .|+.|++.-
T Consensus 30 GtLIs~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~-------~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 99 (240)
T 1mza_A 30 GVLIDPQWVLTAAHCQYRF---TKGQSPTVVLGAHSL-------SKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQ 99 (240)
T ss_dssp EEEEETTEEEECGGGSCTT---CSCSCEEEEESCSBS-------SSCCTTCEEEEEEEEEECCCSSCSSSSSCCEEEEES
T ss_pred EEEecCCEEEECHHhCCCC---CCCCCeEEEeCceec-------CCCCCceEEEEEEEEEeCCCccCCCCCceEEEEEeC
Confidence 5556555 78999998532 112233444444332 111222345666666542 588888854
Q ss_pred cCCC--CceeeeEec
Q 004217 707 PSAE--DEVNVACFH 719 (767)
Q Consensus 707 ~~~~--~~~~~~~~~ 719 (767)
.... +.|..+|.-
T Consensus 100 ~~~~~~~~v~pi~l~ 114 (240)
T 1mza_A 100 TAAKLNKHVKMLHIR 114 (240)
T ss_dssp SCCCCBTTBCCCCBC
T ss_pred CCcccCCceeeeecC
Confidence 3332 356666664
No 378
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=28.62 E-value=20 Score=35.38 Aligned_cols=71 Identities=21% Similarity=0.403 Sum_probs=38.3
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (767)
|.++..+ .++||||+... .| ..+.+-+|..... ..+.....+.|.+++. -.|+.|++.-
T Consensus 30 GtLIs~~~VLTAAHC~~~~--~~--~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 98 (238)
T 1ym0_A 30 GSIINDRWVVCAAHCMQGE--AP--ALVSLVVGEHDSS-------AASTVRQTHDVDSIFVNENYDPATLENDVSVIKTA 98 (238)
T ss_dssp EEEEETTEEEECHHHHTTC--CG--GGEEEEESCSBTT-------SCCSSCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEeeCCEEEECHHhCCCC--CC--ceEEEEEcccccC-------CCCCCceEEEEEEEEECCCCCCCCCcccEEEEEeC
Confidence 5555555 78999998654 23 3344445543321 1122345666777664 2588888753
Q ss_pred cCCC--CceeeeEe
Q 004217 707 PSAE--DEVNVACF 718 (767)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (767)
.... +.|.-+|.
T Consensus 99 ~~~~~~~~v~picL 112 (238)
T 1ym0_A 99 VAITFDINVGPICA 112 (238)
T ss_dssp SCCCCSSSCCCCBC
T ss_pred CCccccCcccccCC
Confidence 2222 34555554
No 379
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=28.57 E-value=23 Score=34.99 Aligned_cols=16 Identities=38% Similarity=0.781 Sum_probs=11.6
Q ss_pred chhhhhh-Hhhhcccee
Q 004217 637 GTVLTSR-AIRAAHCLT 652 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~ 652 (767)
|.++..+ .++||||+.
T Consensus 28 GtLI~~~~VLTAAHC~~ 44 (237)
T 1ao5_A 28 GVLLDRNWVLTAAHCYV 44 (237)
T ss_dssp EEEEETTEEEECTTCCC
T ss_pred EEEeeCCEEEECHHHCC
Confidence 4555555 789999985
No 380
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=28.52 E-value=46 Score=32.32 Aligned_cols=67 Identities=18% Similarity=0.323 Sum_probs=35.6
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (767)
|.++..+ .++||||+.. .+.+-+|..... ..+....++.|.+++.- .|+.|++.-
T Consensus 32 GtLI~~~~VLTAAHC~~~--------~~~v~~G~~~~~-------~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~ 96 (227)
T 3fzz_A 32 GFLVRDKFVLTAAHCKGR--------SMTVTLGAHNIK-------AKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLV 96 (227)
T ss_dssp EEEEETTEEEECTTCCCE--------EEEEEESCSBTT-------SCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEES
T ss_pred EEEEeCCEEEECcccCCC--------CcEEEEcccccC-------CCCCCceEEEEEEEEECcCCCCCCCcCCEEEEEEC
Confidence 5566655 7899999732 233334433221 11222345666666542 488888863
Q ss_pred cCCC--CceeeeEe
Q 004217 707 PSAE--DEVNVACF 718 (767)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (767)
.... +.|.-+|.
T Consensus 97 ~~~~~~~~v~picL 110 (227)
T 3fzz_A 97 RNAKRTRAVRPLNL 110 (227)
T ss_dssp SCCCCBTTBCCCCC
T ss_pred CcCCCCCcccccCC
Confidence 3332 34555565
No 381
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=28.35 E-value=42 Score=33.42 Aligned_cols=70 Identities=23% Similarity=0.513 Sum_probs=36.3
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (767)
|.++..+ .++||||+. .+..-.+. +|...... +.+.....+.|.+++. -.|+.|++.-
T Consensus 45 GtLIs~~~VLTAAHC~~----~~~~~~V~--~G~~~~~~------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 112 (251)
T 1pyt_D 45 GTLITPNHVLTAAHCIS----NTLTYRVA--LGKNNLEV------EDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLA 112 (251)
T ss_dssp EEEEETTEEEECGGGCC----TTCCEEEE--ESCSBTTC------SCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEES
T ss_pred eEEecCCEEEECHHHhC----CCceEEEE--Eccccccc------CCCCCcEEEEEEEEEECCCCCCCCCCCCEEEEEEC
Confidence 4555555 789999986 23333333 34332211 1122233455666653 3588888853
Q ss_pred cCCC--CceeeeEe
Q 004217 707 PSAE--DEVNVACF 718 (767)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (767)
.... +.|..+|.
T Consensus 113 ~~v~~~~~v~picL 126 (251)
T 1pyt_D 113 ETVELGDTIQVACL 126 (251)
T ss_dssp SCCCCCSSCCCCBC
T ss_pred CCcccCCCeeeeEc
Confidence 3322 34666665
No 382
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=27.34 E-value=29 Score=34.56 Aligned_cols=72 Identities=25% Similarity=0.432 Sum_probs=39.3
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (767)
|.++..+ .++||||+.... ....+.+-+|..... ..+.....+.|.+++.- .|+.|++.-
T Consensus 28 GtLIs~~~VLTAAHC~~~~~---~~~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 97 (254)
T 2bz6_H 28 GTLINTIWVVSAAHCFDKIK---NWRNLIAVLGEHDLS-------EHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLH 97 (254)
T ss_dssp EEECSSSEEEECGGGGTTCS---CGGGEEEEESCCBTT-------CCCSCCEEEEEEEEEEETTCCTTSCSSCCEEEEES
T ss_pred EEEecCCEEEECHHHcCCCC---CcceEEEEECCcccC-------CCCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEEC
Confidence 4555555 789999986422 113345555543321 11122345666666542 588998864
Q ss_pred cCCC--CceeeeEe
Q 004217 707 PSAE--DEVNVACF 718 (767)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (767)
.... +.|.-+|.
T Consensus 98 ~~v~~~~~v~picL 111 (254)
T 2bz6_H 98 QPVVLTDHVVPLCL 111 (254)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CccccCCCccceEC
Confidence 3332 45666666
No 383
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=27.22 E-value=19 Score=35.37 Aligned_cols=74 Identities=18% Similarity=0.241 Sum_probs=38.6
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (767)
|.++..+ .++||||+..-...|..-.+.++ ....+-. .+.....+.|.+++.- .|+.|++.-
T Consensus 28 GtLI~~~~VLTAAHC~~~~~~~~~~~~v~~g--~~~~~~~------~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~ 99 (235)
T 4dgj_A 28 ASLVSSDWLVSAAHCVYGRNLEPSKWTAILG--LHMKSNL------TSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLE 99 (235)
T ss_dssp EEECSSSEEEECHHHHTTSCSSGGGEEEEES--CCBTTCC------SCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEES
T ss_pred EEEeeCCEEEECHHhcCCCCCCCccEEEEEe--eeccccc------CCCceeEEeEEEEEECCCCCCCCCCCeEEEEEEC
Confidence 5555555 78999999654444544444444 3222111 1122234556665542 488888753
Q ss_pred cCCC--CceeeeEe
Q 004217 707 PSAE--DEVNVACF 718 (767)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (767)
.... +.|.-+|.
T Consensus 100 ~~~~~~~~v~picL 113 (235)
T 4dgj_A 100 FKVNYTDYIQPISL 113 (235)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CccccCCcccccCC
Confidence 2222 34566665
No 384
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=27.14 E-value=4.1e+02 Score=28.67 Aligned_cols=92 Identities=8% Similarity=0.006 Sum_probs=0.0
Q ss_pred eEEEEECCCC--eEEEEEccC------CCCcEEEEEc---cC----CCcEEEEEeCCCeEEEEECCCCeEEEeec---CC
Q 004217 130 TVKIIDCQTG--SCLKVLHGH------RRTPWVVRFH---PL----NPTIIASGSLDHEVRLWNASTAECIGSRD---FY 191 (767)
Q Consensus 130 tVrVWDl~tg--~~l~~L~gH------~~~V~sLafs---P~----dg~lLaSgS~DGtVrIWDl~tg~~i~~l~---h~ 191 (767)
+|.+||+.++ +.++++.-. ...+..+++. |. ++...++=+.+..|.++|+.+++..+.+. ..
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Q ss_pred C----------------CeEEEEEcCC----CCEEEEEECCcEEEEEcCC
Q 004217 192 R----------------PIASIAFHAS----GELLAVASGHKLYIWRYNM 221 (767)
Q Consensus 192 ~----------------~VtsVafSPd----G~~LAsgSdd~V~VWDl~t 221 (767)
. .+..|+.+|+ ++.|....-.+-++|-+.+
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T 253 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNT 253 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEH
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEH
No 385
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=27.12 E-value=82 Score=37.25 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=29.7
Q ss_pred eEEEEECCCCCeEEEEeCCCeEEEEECCCCeEEEEEcc
Q 004217 110 TIAAAFSPDGKTLASTHGDHTVKIIDCQTGSCLKVLHG 147 (767)
Q Consensus 110 VtsVaFSpDG~~LASgs~DGtVrVWDl~tg~~l~~L~g 147 (767)
|.++.+ +..+|++-+.|+++|+||+++++++....-
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 555555 477999999999999999999998877643
No 386
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=26.95 E-value=34 Score=34.53 Aligned_cols=72 Identities=17% Similarity=0.432 Sum_probs=37.0
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE-----------ecCcEEEE
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR-----------VSDMELVR 704 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 704 (767)
|.++..+ .++||||+... +..+.+.+-+|.....- .+.....+.|.+++. -.|+.|++
T Consensus 56 GtLI~~~~VLTAAHC~~~~---~~~~~~~v~~G~~~~~~-------~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~ 125 (276)
T 2jde_A 56 GSLMSPCWVISATHCFIDY---PKKEDYIVYLGRSRLNS-------NTQGEMKFEVENLILHKDYSADTLAHHNDIALLK 125 (276)
T ss_dssp EEEEETTEEEECGGGTTTS---CCGGGEEEEESCCBSSS-------CCTTCEEEEEEEEEECTTCEECSSCEESCCEEEE
T ss_pred eEEeeCCEEEEcHHhccCC---CCcccEEEEecccccCC-------CCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEE
Confidence 5666666 78999998642 12233444455433211 111223445555432 25888888
Q ss_pred eecC------CCCceeeeEe
Q 004217 705 VLPS------AEDEVNVACF 718 (767)
Q Consensus 705 ~~~~------~~~~~~~~~~ 718 (767)
.-.. -.+.|.-+|.
T Consensus 126 L~~~~~~~~~~~~~v~picL 145 (276)
T 2jde_A 126 IRSKEGRCAQPSRTIQTICL 145 (276)
T ss_dssp EECTTSCCCCCBTTBCCCBC
T ss_pred eCCccccccccCCceEccCC
Confidence 5322 2345555665
No 387
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=26.81 E-value=35 Score=33.93 Aligned_cols=72 Identities=25% Similarity=0.488 Sum_probs=37.2
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---cCcEEEEeecCCC--
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---SDMELVRVLPSAE-- 710 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-- 710 (767)
|.++..+ .++||||+.... .|. .+.+-+|.... .+.+.....+.|.++|.- .|+.|++.-....
T Consensus 46 GsLIs~~~VLTAAHC~~~~~-~~~--~~~v~~G~~~~-------~~~~~~~~~~~v~~~~~hp~~~DIALl~L~~~v~~~ 115 (247)
T 1ddj_A 46 GTLISPEWVLTAAHCLEKSP-RPS--SYKVILGAHQE-------VNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVIT 115 (247)
T ss_dssp EEEEETTEEEECGGGGTTCS-CGG--GCEEEESCSBS-------SSCCTTCEEEEEEEEEECTTSCSCEEEEESSCCCCC
T ss_pred EEEeeCCEEEEcHHHcCCCC-CCc--cEEEEEccccc-------CccCCceEEEEeeeEEcCCCCCcEEEEEeCCceeeC
Confidence 4555555 789999986421 222 23333443322 111223445566676653 5888888533222
Q ss_pred CceeeeEe
Q 004217 711 DEVNVACF 718 (767)
Q Consensus 711 ~~~~~~~~ 718 (767)
+.|.-+|.
T Consensus 116 ~~v~picL 123 (247)
T 1ddj_A 116 DKVIPACL 123 (247)
T ss_dssp SSCCCCBC
T ss_pred CCEEeeec
Confidence 34555565
No 388
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=26.44 E-value=46 Score=32.89 Aligned_cols=70 Identities=21% Similarity=0.454 Sum_probs=37.1
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe-----------cCcEEEE
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV-----------SDMELVR 704 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 704 (767)
|.++..+ .++||||+. .+ ..+-+-+|..... ..+.....+.|.+++.- .|+.|++
T Consensus 32 GtLI~~~~VLTAAHC~~----~~--~~~~V~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~ 98 (241)
T 1bru_P 32 GTLVDQSWVLTAAHCIS----SS--RTYRVVLGRHSLS-------TNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLK 98 (241)
T ss_dssp EEEEETTEEEECGGGCC----TT--SCEEEEESCSBSS-------SCCTTCEEEEEEEEEECTTCCTTCGGGCCCCEEEE
T ss_pred eEEeeCCEEEEcHHhcc----cC--CceEEEEEccccc-------CCCCccEEEEEEEEEECCCCCCCCCCCCCcEEEEE
Confidence 5555555 889999986 23 2233334433221 11222345666666531 5888888
Q ss_pred eecCCC--CceeeeEec
Q 004217 705 VLPSAE--DEVNVACFH 719 (767)
Q Consensus 705 ~~~~~~--~~~~~~~~~ 719 (767)
.-.... +.|.-+|.-
T Consensus 99 L~~~v~~~~~v~picLp 115 (241)
T 1bru_P 99 LASPVSLTDKIQLGCLP 115 (241)
T ss_dssp ESSCCCCCSSCCCCBCC
T ss_pred eCCCcccCCccCCcccC
Confidence 533322 346666653
No 389
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=26.37 E-value=6.7e+02 Score=27.46 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=56.8
Q ss_pred eEEEEEEcCCC-EEEEEeCCCeEEEEeCCCC----C-------CC-----CCCCCeEEEEECCC----CCeEEEEeC--C
Q 004217 72 QIFEAGRDARR-GLASWVEAESLHHLRPKYC----P-------LS-----PPPRSTIAAAFSPD----GKTLASTHG--D 128 (767)
Q Consensus 72 ~~~vA~sd~g~-~LaSgs~DgsIrlWd~~t~----~-------L~-----gH~~sVtsVaFSpD----G~~LASgs~--D 128 (767)
+..+++..++. +|+.....+.|++++.... . +. ...+....|+|+|+ +.+.++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 55666666664 5666667899999975422 1 11 11457899999996 444343332 1
Q ss_pred ----------CeEEEEECCC----------CeEEEEEc--cCCCCcEEEEEccCCCcEEEEEeCC
Q 004217 129 ----------HTVKIIDCQT----------GSCLKVLH--GHRRTPWVVRFHPLNPTIIASGSLD 171 (767)
Q Consensus 129 ----------GtVrVWDl~t----------g~~l~~L~--gH~~~V~sLafsP~dg~lLaSgS~D 171 (767)
..|.-|.+.. .+.+..+. .....-..|.|.| |+.++++.+..
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~ 159 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDG 159 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCT
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCC
Confidence 1344455532 12333332 1123457899999 88888876653
No 390
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=25.96 E-value=33 Score=33.34 Aligned_cols=67 Identities=19% Similarity=0.359 Sum_probs=35.2
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 706 (767)
|.++..+ .++||||+.+ .+.+-+|...... . +.....+.+.+++.- .|+.|++.-
T Consensus 27 GtLI~~~~VLTAAhC~~~--------~~~v~~g~~~~~~-----~--~~~~~~~~v~~~~~hp~y~~~~~~~DIAll~L~ 91 (223)
T 4i8h_A 27 GSLINSQWVVSAAHCYKS--------GIQVRLGEDNINV-----V--EGNEQFISASKSIVHPSYNSNTLNNDIMLIKLK 91 (223)
T ss_dssp EEECSSSEEEECGGGCCS--------SCEEEESCSSTTS-----C--CSCCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEEcCCEEEecHHhCCC--------CcEEEEccccccc-----c--CCCcEEEEEeEEEECcCCCCCCCcCCEEEEEEC
Confidence 6666655 7799999852 2333334333211 1 112234566666653 488888853
Q ss_pred cCCC--CceeeeEe
Q 004217 707 PSAE--DEVNVACF 718 (767)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (767)
.... +.|.-+|.
T Consensus 92 ~~~~~~~~v~pi~l 105 (223)
T 4i8h_A 92 SAASLNSRVASISL 105 (223)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CcCcCCCceeceEC
Confidence 3222 34555554
No 391
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=25.74 E-value=5.8e+02 Score=26.45 Aligned_cols=142 Identities=8% Similarity=-0.028 Sum_probs=71.6
Q ss_pred CeEEEEECC-C-CCeEEEEeCCCeEEEEECCCCeEEEEEcc-------------------CCCCcEEEEEccCCCcEEEE
Q 004217 109 STIAAAFSP-D-GKTLASTHGDHTVKIIDCQTGSCLKVLHG-------------------HRRTPWVVRFHPLNPTIIAS 167 (767)
Q Consensus 109 sVtsVaFSp-D-G~~LASgs~DGtVrVWDl~tg~~l~~L~g-------------------H~~~V~sLafsP~dg~lLaS 167 (767)
.|.++++.| + ...|..+...+.|...+ +.|+....+.. ....+.+|.++|.+.+.+..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 578899987 3 56666666666555543 33433333321 12347789998844444444
Q ss_pred EeCCCeEEEEECCCCeEEEeecC--------------CCCeEEEEEcCC-CCEEEEEECCcEEEEEcCCCccccCCeEEe
Q 004217 168 GSLDHEVRLWNASTAECIGSRDF--------------YRPIASIAFHAS-GELLAVASGHKLYIWRYNMREETSSPRIVL 232 (767)
Q Consensus 168 gS~DGtVrIWDl~tg~~i~~l~h--------------~~~VtsVafSPd-G~~LAsgSdd~V~VWDl~t~~~~~~~~~l~ 232 (767)
+..++.|...+- .++....+.. ...+.+++++|+ ...|.++..++|...+-. ++.........
T Consensus 195 g~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~D~-G~tW~~~~~~l 272 (394)
T 3b7f_A 195 GMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDRR-EGVWKRIGDAM 272 (394)
T ss_dssp EEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEETT-TTEEECGGGGS
T ss_pred EECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeCCC-CCcceECCCCC
Confidence 444444444322 1222111110 134889999986 356767777776665422 22111010000
Q ss_pred cC--CCCeEEEEEccC-CCeEEEE
Q 004217 233 RT--RRSLRAVHFHPH-AAPLLLT 253 (767)
Q Consensus 233 ~h--~~~VtsVaFSPD-G~~LlaS 253 (767)
.. ...+.++.++|. ...+.++
T Consensus 273 ~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 273 PREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp CTTTCSCEEEEEECSSCTTCEEEE
T ss_pred CCCCccceEEEEECCCCCCEEEEE
Confidence 11 134567888874 3334443
No 392
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=25.69 E-value=30 Score=33.65 Aligned_cols=72 Identities=21% Similarity=0.416 Sum_probs=38.8
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE--------ecCcEEEEeec
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR--------VSDMELVRVLP 707 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 707 (767)
|.++..+ .++||||+... .+ ..+.+-+|..... ..+.....+.|.+++. -.|+.|++.-.
T Consensus 28 GtLI~~~~VLTAAHC~~~~--~~--~~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~ 96 (218)
T 2z7f_E 28 ATLIAPNFVMSAAHCVANV--NV--RAVRVVLGAHNLS-------RREPTRQVFAVQRIFENGYDPVNLLNDIVILQLNG 96 (218)
T ss_dssp EEEEETTEEEECHHHHTTS--CG--GGCEEEESCSBTT-------SCCTTCEEEEEEEEEESCCBTTTTBSCCEEEEESS
T ss_pred EEEccCCEEEEcHHhcCCC--Cc--CcEEEEEeceecC-------CCCCceEEEEEEEEEccCCCCCCCCCCEEEEEECC
Confidence 4555555 78999999642 22 2334444443321 1122234566666654 25888988643
Q ss_pred CCC--CceeeeEec
Q 004217 708 SAE--DEVNVACFH 719 (767)
Q Consensus 708 ~~~--~~~~~~~~~ 719 (767)
... +.|.-+|.-
T Consensus 97 ~~~~~~~v~picL~ 110 (218)
T 2z7f_E 97 SATINANVQVAQLP 110 (218)
T ss_dssp CCCCSSSCCCCCCC
T ss_pred cCcCCCceeccCcC
Confidence 332 356666663
No 393
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=25.65 E-value=44 Score=32.87 Aligned_cols=74 Identities=22% Similarity=0.363 Sum_probs=39.1
Q ss_pred chhhhhh-HhhhccceeEEEe-ccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEEEe
Q 004217 637 GTVLTSR-AIRAAHCLTSIQF-SPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELVRV 705 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 705 (767)
|.++..+ .++||||+..... .|. .+.+-+|...... .+.....+.|.+++.- .|+.|++.
T Consensus 32 GtLIs~~~VLTAAHC~~~~~~~~~~--~~~v~~G~~~~~~-------~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L 102 (237)
T 2f91_A 32 ASIYNENYAITAGHCVYGDDYENPS--GLQIVAGELDMSV-------NEGSEQIITVSKIILHENFDYNLLDNDISLLKL 102 (237)
T ss_dssp EEEEETTEEEECGGGTTTSCTTSCC--SEEEEESCSBTTS-------CCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEE
T ss_pred EEEeeCCEEEEcHHhCCCCccCCcc--cEEEEECCeeccC-------CCCccEEEEEEEEEECCCCCCCCCCCcEEEEEE
Confidence 5556555 8899999864321 222 3344445433211 1222345667776542 58888885
Q ss_pred ecCCC--CceeeeEec
Q 004217 706 LPSAE--DEVNVACFH 719 (767)
Q Consensus 706 ~~~~~--~~~~~~~~~ 719 (767)
-.... +.|.-+|.-
T Consensus 103 ~~~v~~~~~v~picLp 118 (237)
T 2f91_A 103 SGSLTFNDNVAPIALP 118 (237)
T ss_dssp SSCCCCBTTBCCCBCC
T ss_pred CCCcccCCceeeccCC
Confidence 33222 345556653
No 394
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=25.59 E-value=36 Score=33.47 Aligned_cols=16 Identities=31% Similarity=0.831 Sum_probs=11.7
Q ss_pred chhhhhh-Hhhhcccee
Q 004217 637 GTVLTSR-AIRAAHCLT 652 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~ 652 (767)
|.++..+ .++||||+.
T Consensus 28 GsLIs~~~VLTAAHC~~ 44 (238)
T 1spj_A 28 GILVHRQWVLTAAHCIS 44 (238)
T ss_dssp EEEEETTEEEECGGGCC
T ss_pred EEEecCCEEEEcHHhCC
Confidence 4555555 789999985
No 395
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=25.57 E-value=34 Score=33.38 Aligned_cols=69 Identities=17% Similarity=0.302 Sum_probs=37.2
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE-------ecCcEEEEeecC
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR-------VSDMELVRVLPS 708 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 708 (767)
|.++..+ .++||||+... .+ ..+.+-+|.... ......+.|.+++. -.|+.|++.-..
T Consensus 28 GtLI~~~~VLTAAHC~~~~--~~--~~~~v~~G~~~~----------~~~~~~~~v~~i~~hp~y~~~~~DiALl~L~~~ 93 (224)
T 1pq7_A 28 GSLLNANTVLTAAHCVSGY--AQ--SGFQIRAGSLSR----------TSGGITSSLSSVRVHPSYSGNNNDLAILKLSTS 93 (224)
T ss_dssp EEEEETTEEEECHHHHTTS--CG--GGEEEEESCSBS----------SSSSEEECEEEEEECTTCBTTBTCCEEEEESSC
T ss_pred EEEecCCEEEEcHHccCCC--CC--CceEEEeCccee----------cCCCEEEEEEEEEECCCCCCCCCCEEEEEeCCC
Confidence 4455555 78999998642 12 233444444322 11123455666554 358899886433
Q ss_pred CC--CceeeeEec
Q 004217 709 AE--DEVNVACFH 719 (767)
Q Consensus 709 ~~--~~~~~~~~~ 719 (767)
.. +.|..+|.-
T Consensus 94 ~~~~~~v~picL~ 106 (224)
T 1pq7_A 94 IPSGGNIGYARLA 106 (224)
T ss_dssp CCCBTTBCCCCBC
T ss_pred CcCCCcccceecC
Confidence 32 356667764
No 396
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=25.49 E-value=1.8e+02 Score=33.50 Aligned_cols=60 Identities=13% Similarity=0.285 Sum_probs=40.0
Q ss_pred CeEEEEEcCCCCEEEEEEC-------------CcEEEEEcCCCccccCCeEEec-CCCCeEEEEEccCCCeEEEEEe
Q 004217 193 PIASIAFHASGELLAVASG-------------HKLYIWRYNMREETSSPRIVLR-TRRSLRAVHFHPHAAPLLLTAE 255 (767)
Q Consensus 193 ~VtsVafSPdG~~LAsgSd-------------d~V~VWDl~t~~~~~~~~~l~~-h~~~VtsVaFSPDG~~LlaSgs 255 (767)
....|+|+++|.+.+.... +.|..++..+++... .+.. ....++.++|+||+++|+++-.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~---fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRR---FMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEE---EEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEE---EEeCCCCccccCCEECCCCCEEEEEEe
Confidence 4567999999987764321 136666665565422 2332 2467899999999998887754
No 397
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=24.85 E-value=26 Score=28.62 Aligned_cols=16 Identities=31% Similarity=0.775 Sum_probs=11.4
Q ss_pred chhhhhh-Hhhhcccee
Q 004217 637 GTVLTSR-AIRAAHCLT 652 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~ 652 (767)
|.++..+ .++||||+.
T Consensus 28 GslIs~~~VLTAAHC~~ 44 (80)
T 2pka_A 28 GVLVNPKWVLTAAHCKN 44 (80)
T ss_dssp EEEEETTEEEECGGGCC
T ss_pred EEEEcCCEEEECHHHCC
Confidence 4445444 789999985
No 398
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=24.71 E-value=36 Score=33.28 Aligned_cols=16 Identities=31% Similarity=0.669 Sum_probs=11.9
Q ss_pred chhhhhh-Hhhhcccee
Q 004217 637 GTVLTSR-AIRAAHCLT 652 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~ 652 (767)
|.++..+ .++||||+.
T Consensus 28 GtLIs~~~VLTAAHC~~ 44 (223)
T 1lo6_A 28 GVLIHPLWVLTAAHCKK 44 (223)
T ss_dssp EEEEETTEEEECGGGCC
T ss_pred eEEecCCEEEECccCCC
Confidence 5555555 789999975
No 399
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=24.26 E-value=36 Score=33.75 Aligned_cols=74 Identities=22% Similarity=0.417 Sum_probs=39.7
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (767)
|.++..+ .++||||+... +.| ..+.+-+|..... ..+.....+.|.+++. -.|+.|++.-
T Consensus 34 GtLI~~~~VLTAAHC~~~~-~~~--~~~~V~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 103 (252)
T 1rtf_B 34 GILISSCWILSAAHCFQER-FPP--HHLTVILGRTYRV-------VPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLK 103 (252)
T ss_dssp EEECSSSEEEECGGGGTTC-CCG--GGEEEEESCSBSS-------SCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEEC
T ss_pred EEEEeCCEEEECHHHCCCC-CCc--ccEEEEeCccccc-------CCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEEC
Confidence 4555555 78999998542 223 3344444543321 1122234566777654 2588998853
Q ss_pred cC------CCCceeeeEecc
Q 004217 707 PS------AEDEVNVACFHP 720 (767)
Q Consensus 707 ~~------~~~~~~~~~~~~ 720 (767)
.. -.+.|.-+|.-+
T Consensus 104 ~~~~~~~~~~~~v~picLp~ 123 (252)
T 1rtf_B 104 SDSSRCAQESSVVRTVCLPP 123 (252)
T ss_dssp CSSSCCSCCBTTBCCCBCCC
T ss_pred CccccccccCCceeceeCCC
Confidence 22 124566677643
No 400
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=23.88 E-value=39 Score=33.23 Aligned_cols=16 Identities=38% Similarity=0.814 Sum_probs=11.6
Q ss_pred chhhhhh-Hhhhcccee
Q 004217 637 GTVLTSR-AIRAAHCLT 652 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~ 652 (767)
|.++..+ .++||||+.
T Consensus 26 GsLIs~~~VLTAAHC~~ 42 (235)
T 1ton_A 26 GVLIDPSWVITAAHCYS 42 (235)
T ss_dssp EEEEETTEEEECGGGCC
T ss_pred EEEecCCEEEEcHHhCC
Confidence 4555555 789999984
No 401
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=23.76 E-value=91 Score=36.87 Aligned_cols=36 Identities=11% Similarity=0.228 Sum_probs=29.3
Q ss_pred cEEEEEccCCCcEEEEEeCCCeEEEEECCCCeEEEeecC
Q 004217 152 PWVVRFHPLNPTIIASGSLDHEVRLWNASTAECIGSRDF 190 (767)
Q Consensus 152 V~sLafsP~dg~lLaSgS~DGtVrIWDl~tg~~i~~l~h 190 (767)
|.++.+ +..++++-+.|+++|+||+++++++.....
T Consensus 224 Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF---HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE---TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc---CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444444 468999999999999999999999887543
No 402
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=23.62 E-value=44 Score=32.74 Aligned_cols=75 Identities=16% Similarity=0.233 Sum_probs=39.3
Q ss_pred chhhhhh-HhhhccceeEE---EeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEEe---------cCcEEE
Q 004217 637 GTVLTSR-AIRAAHCLTSI---QFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYRV---------SDMELV 703 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 703 (767)
|.++..+ .++||||+..- .+.+ ...+.+-+|....+. ..+.....++|.+++.- .|+.|+
T Consensus 29 GtLI~~~~VLTAAhC~~~~~~~~~~~-~~~~~v~~G~~~~~~------~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl 101 (241)
T 3ncl_A 29 ASLISPNWLVSAAHCYIDDRGFRYSD-PTQWTAFLGLHDQSQ------RSAPGVQERRLKRIISHPFFNDFTFDYDIALL 101 (241)
T ss_dssp EEECSSSEEEECGGGGCCBTTBCTTC-GGGEEEEESCSBTTC------TTSTTCEEEEEEEEEECTTCCTTTCTTCCEEE
T ss_pred EEEeeCCEEEEcHHhcccCCCccccC-CceEEEEEecccccc------CCCCCceEEEEEEEEECCCCCCCCCCCcEEEE
Confidence 5555555 78999998643 1111 122333344433211 11223456677777653 488888
Q ss_pred EeecCC--CCceeeeEe
Q 004217 704 RVLPSA--EDEVNVACF 718 (767)
Q Consensus 704 ~~~~~~--~~~~~~~~~ 718 (767)
+.-... .+.|.-+|.
T Consensus 102 ~L~~~~~~~~~v~picl 118 (241)
T 3ncl_A 102 ELEKPAEYSSMVRPISL 118 (241)
T ss_dssp EESSCCCCCSSCCCCBC
T ss_pred EECCCCcccCccCceEc
Confidence 853322 235666665
No 403
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=23.53 E-value=39 Score=32.83 Aligned_cols=69 Identities=16% Similarity=0.337 Sum_probs=37.8
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE--------ecCcEEEEeec
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR--------VSDMELVRVLP 707 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 707 (767)
|.++..+ .++||||+.. .....+.+-+|..... +.+ ..+.+.+++. -.|+.|++.-.
T Consensus 28 GtLIs~~~VLTAAHC~~~----~~~~~~~v~~G~~~~~-------~~~---~~~~v~~i~~h~y~~~~~~~DiAll~L~~ 93 (235)
T 3h7t_A 28 GSILTANFVITAAQCVDG----TKPSDISIHYGSSYRT-------TKG---TSVMAKKIYIVRYHPLTMQNNYAVIETEM 93 (235)
T ss_dssp EEESSSSEEEECHHHHTT----CCGGGEEEEESCSBSS-------SSS---EEEEEEEEEECSCBTTTTBTCCEEEEESS
T ss_pred EEEeeCCEEEECHHHCCC----CCCCeeEEEcCccccc-------cCC---ceeeeeeEEeeecCCCCCCCCeEEEEecc
Confidence 5555555 7899999962 2234455555654431 222 4455666653 25888887532
Q ss_pred CCC--C-ceeeeEec
Q 004217 708 SAE--D-EVNVACFH 719 (767)
Q Consensus 708 ~~~--~-~~~~~~~~ 719 (767)
... + .|.-+|..
T Consensus 94 ~v~~~~~~v~pi~Lp 108 (235)
T 3h7t_A 94 PIKLDDKTTKKIELP 108 (235)
T ss_dssp CCCCCSSSCCCCBCC
T ss_pred ccccCCccccceecC
Confidence 221 1 45556653
No 404
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=23.41 E-value=23 Score=34.79 Aligned_cols=17 Identities=29% Similarity=0.829 Sum_probs=12.2
Q ss_pred chhhhhh-HhhhccceeE
Q 004217 637 GTVLTSR-AIRAAHCLTS 653 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~ 653 (767)
|.++..+ .++||||+..
T Consensus 28 GtLI~~~~VLTAAHC~~~ 45 (226)
T 1azz_A 28 GSLISPEWILTAAHCMDG 45 (226)
T ss_dssp EEEEETTEEEECHHHHTT
T ss_pred EEEecCCEEEEhHHhcCC
Confidence 4555555 8899999863
No 405
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=22.95 E-value=1.9e+02 Score=33.36 Aligned_cols=59 Identities=22% Similarity=0.286 Sum_probs=41.7
Q ss_pred CeEEEEECCCCCeEEEEeCC------------CeEEEEECCCCeEEEEEccCC-CCcEEEEEccCCCcEEEEE
Q 004217 109 STIAAAFSPDGKTLASTHGD------------HTVKIIDCQTGSCLKVLHGHR-RTPWVVRFHPLNPTIIASG 168 (767)
Q Consensus 109 sVtsVaFSpDG~~LASgs~D------------GtVrVWDl~tg~~l~~L~gH~-~~V~sLafsP~dg~lLaSg 168 (767)
..--|+|+++|++++.-..+ ..+.+.+..+++..+.+.++. ..++.++|+| |++.|+..
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp-Dg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC-CCCEEEEE
Confidence 34679999999977765432 246667777888777676654 5799999999 66655543
No 406
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=22.60 E-value=53 Score=32.07 Aligned_cols=67 Identities=18% Similarity=0.355 Sum_probs=34.9
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (767)
|.++..+ .++||||+. . .+.+-+|...... . +.....+.|.+++. -.|+.|++.-
T Consensus 27 GsLIs~~~VLTAAHC~~------~--~~~v~~G~~~~~~-----~--~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 91 (223)
T 3mfj_A 27 GSLINSQWVVSAAHCYK------S--GIQVRLGEDNINV-----V--EGNEQFISASKSIVHPSYNSNTLNNDIMLIKLK 91 (223)
T ss_dssp EEEEETTEEEECGGGCC------S--SCEEEESCSSTTS-----C--CSCCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred EEEecCCEEEEhHHhcC------C--CcEEEECCceecc-----c--CCCcEEEEeeEEEECCCCCCCCCCCCEEEEEeC
Confidence 5555555 789999983 2 2233334332211 1 11224556666654 2588888853
Q ss_pred cCCC--CceeeeEe
Q 004217 707 PSAE--DEVNVACF 718 (767)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (767)
.... +.|.-+|.
T Consensus 92 ~~~~~~~~v~picL 105 (223)
T 3mfj_A 92 SAASLNSRVASISL 105 (223)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CCcccCCcEeeeEC
Confidence 3322 34555565
No 407
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=22.53 E-value=54 Score=32.32 Aligned_cols=74 Identities=20% Similarity=0.434 Sum_probs=38.0
Q ss_pred chhhhhh-HhhhccceeE----EEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE----------ecCcE
Q 004217 637 GTVLTSR-AIRAAHCLTS----IQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR----------VSDME 701 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 701 (767)
|.++..+ .++||||+.. ..+.+. .+.+-+|.....-. ......++.|.+++. -.|+.
T Consensus 30 GtLI~~~~VLTAAHC~~~~~~~~~~~~~--~~~v~~G~~~~~~~------~~~~~~~~~v~~i~~hp~y~~~~~~~~DIA 101 (259)
T 3rm2_H 30 ASLISDRWVLTAAHCLLYPPWDKNFTEN--DLLVRIGKHSRTRY------ERNIEKISMLEKIYIHPRYNWRENLDRDIA 101 (259)
T ss_dssp EEECSSSEEEECGGGTEEGGGTEECCGG--GEEEEESCCBSSSC------CTTTCEEEEEEEEEECTTCBTTTTCBTCCE
T ss_pred EEEEeCCEEEEcHHhCcccccccccCcc--cEEEEECccccccc------ccCcceeeEEEEEEECCCCCCCCCCCCcEE
Confidence 5556555 7899999964 334443 34444554333111 111122334555532 13888
Q ss_pred EEEeecCCC--CceeeeEe
Q 004217 702 LVRVLPSAE--DEVNVACF 718 (767)
Q Consensus 702 ~~~~~~~~~--~~~~~~~~ 718 (767)
|++.-.... +.|.-+|.
T Consensus 102 Ll~L~~~v~~~~~v~picL 120 (259)
T 3rm2_H 102 LMKLKKPVAFSDYIHPVCL 120 (259)
T ss_dssp EEEESSCCCCBTTBCCCBC
T ss_pred EEEeCCceEcCCCcccccC
Confidence 888643332 45666665
No 408
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=22.10 E-value=8.9e+02 Score=28.12 Aligned_cols=112 Identities=10% Similarity=-0.022 Sum_probs=60.7
Q ss_pred CeEEEE-ECCCCCeEEEE-eC----CCeEEEEECCCCeEEE-EEc-cCCC------CcEEEEEccCCCcEEEEEe-----
Q 004217 109 STIAAA-FSPDGKTLAST-HG----DHTVKIIDCQTGSCLK-VLH-GHRR------TPWVVRFHPLNPTIIASGS----- 169 (767)
Q Consensus 109 sVtsVa-FSpDG~~LASg-s~----DGtVrVWDl~tg~~l~-~L~-gH~~------~V~sLafsP~dg~lLaSgS----- 169 (767)
....+. ++||+++++.+ +. -..|+++|+.+++.+. .|. .-+. ....++|-. +..++++..
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d-~~~~~~~~~~~~~~ 208 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWIN-KDTIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEE-TTEEEECCCCSTTC
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEEC-CCEEEEEeCCCCCC
Confidence 345566 89999987664 22 2479999999998652 122 0001 113458864 555555421
Q ss_pred -----CCCeEEEEECCCCe----EEEeecCCCCeEEEEEcCCCCE-----EEEEECC----cEEEEEcCC
Q 004217 170 -----LDHEVRLWNASTAE----CIGSRDFYRPIASIAFHASGEL-----LAVASGH----KLYIWRYNM 221 (767)
Q Consensus 170 -----~DGtVrIWDl~tg~----~i~~l~h~~~VtsVafSPdG~~-----LAsgSdd----~V~VWDl~t 221 (767)
...+|+.|.+-+.. .+..-...........++++++ +++.+.+ .+++.|...
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 278 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKY 278 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSS
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCC
Confidence 23568999887643 2222222222334556677662 3433322 277777653
No 409
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=21.97 E-value=50 Score=32.87 Aligned_cols=69 Identities=22% Similarity=0.366 Sum_probs=36.0
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (767)
|.++..+ .++||||+.. +. .+.+-+|.-... ..+.....+.|.+++. -.|+.|++.-
T Consensus 29 GsLI~~~~VLTAAHC~~~----~~--~~~v~~G~~~~~-------~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (250)
T 1aut_C 29 AVLIHPSWVLTAAHCMDE----SK--KLLVRLGEYDLR-------RWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLA 95 (250)
T ss_dssp EEEEETTEEEECGGGSSS----CS--CCEEEESCCBTT-------CCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEES
T ss_pred EEEeeCCEEEEChHHcCC----CC--ceEEEEcccccC-------CCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEEC
Confidence 4555555 7899999853 22 233444443221 0111234556666653 2588888853
Q ss_pred cCCC--CceeeeEe
Q 004217 707 PSAE--DEVNVACF 718 (767)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (767)
.... +.|.-+|.
T Consensus 96 ~~v~~~~~v~picL 109 (250)
T 1aut_C 96 QPATLSQTIVPICL 109 (250)
T ss_dssp SCCCCBTTBCCCBC
T ss_pred CcccCCCceeeeEc
Confidence 3322 34555665
No 410
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=21.71 E-value=22 Score=35.13 Aligned_cols=17 Identities=24% Similarity=0.835 Sum_probs=12.2
Q ss_pred chhhhhh-HhhhccceeE
Q 004217 637 GTVLTSR-AIRAAHCLTS 653 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~ 653 (767)
|.++..+ .++||||+..
T Consensus 30 GtLIs~~~VLTAAhC~~~ 47 (240)
T 1fon_A 30 GSLIAPDWVVTAGHCIST 47 (240)
T ss_dssp CEEEETTEEEECGGGCCT
T ss_pred EEEeeCCEEEECHHHCCC
Confidence 4555555 8899999864
No 411
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=21.44 E-value=31 Score=33.47 Aligned_cols=71 Identities=17% Similarity=0.302 Sum_probs=38.2
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE--------ecCcEEEEeec
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR--------VSDMELVRVLP 707 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 707 (767)
|.++..+ .++||||+.. .....+.+.+|.....- ......+.+.+++. -.|+.|++.-.
T Consensus 30 GtLI~~~~VLTAAHC~~~----~~~~~~~v~~g~~~~~~--------~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~ 97 (228)
T 3h7o_A 30 GAILSQWFVLTAAHCVFD----QKPETIVIQYESTNLWE--------DPGKSDPYVSHVYLSFYRQETMENDIAILELSR 97 (228)
T ss_dssp EEESSSSEEEECHHHHTT----SCGGGCEEEESCSBTTT--------BCCEEECCEEEEEESSCBTTTTBTCCEEEEESS
T ss_pred eEEeeCCEEEEcHHhccc----CCCCcEEEEeccccccc--------CCCceeeeEEEEEccccCCCCccCCEEEEEECC
Confidence 6666666 7899999962 22344555555543311 11113444555553 25888888533
Q ss_pred CCC--C-ceeeeEec
Q 004217 708 SAE--D-EVNVACFH 719 (767)
Q Consensus 708 ~~~--~-~~~~~~~~ 719 (767)
... + .|..+|.-
T Consensus 98 ~v~~~~~~v~pi~lp 112 (228)
T 3h7o_A 98 PLKLDGLKSKPAKLP 112 (228)
T ss_dssp CCCCCSSSSCCCBCC
T ss_pred cccccccccccccCC
Confidence 222 2 45566653
No 412
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=21.26 E-value=57 Score=31.90 Aligned_cols=69 Identities=23% Similarity=0.316 Sum_probs=36.2
Q ss_pred chhhhhh-HhhhccceeEEEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE---------ecCcEEEEee
Q 004217 637 GTVLTSR-AIRAAHCLTSIQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR---------VSDMELVRVL 706 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 706 (767)
|.++..+ .++||||+.. + ..+.+-+|...... .+....++.|.+++. -.|+.|++.-
T Consensus 29 GtLI~~~~VLTAAHC~~~----~--~~~~V~~G~~~~~~-------~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~ 95 (228)
T 1fxy_A 29 GTILSEFYILTAAHCLYQ----A--KRFKVRVGDRNTEQ-------EEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLK 95 (228)
T ss_dssp EEECSSSEEEECGGGTTS----C--SSCEEEEECSCTTT-------CCCCEEEEEEEEEEECTTCBTTTTBTCCEEEEES
T ss_pred EEEeeCCEEEECHHHCCC----C--CcEEEEECccCccc-------cCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEEC
Confidence 4555555 7899999842 2 23334444433211 112234566666654 2488888854
Q ss_pred cCCC--CceeeeEe
Q 004217 707 PSAE--DEVNVACF 718 (767)
Q Consensus 707 ~~~~--~~~~~~~~ 718 (767)
.... +.|.-+|.
T Consensus 96 ~~v~~~~~v~picL 109 (228)
T 1fxy_A 96 TPITFRMNVAPASL 109 (228)
T ss_dssp SCCCCBTTBCCCCC
T ss_pred CcccCCCceeccCC
Confidence 3322 34555565
No 413
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=20.91 E-value=73 Score=32.45 Aligned_cols=75 Identities=20% Similarity=0.403 Sum_probs=38.3
Q ss_pred chhhhhh-HhhhccceeE----EEeccCccceEEeecccccccceeeEEcCceeeeeEEEEEEEE----------ecCcE
Q 004217 637 GTVLTSR-AIRAAHCLTS----IQFSPTSENLLLAYGRRHSSLLKSVLIDGEITVPTYTILEVYR----------VSDME 701 (767)
Q Consensus 637 ~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 701 (767)
|.++..+ .++||||+.. ..+.+.. +.+-+|.-...- .......++.|.+++. -.|+.
T Consensus 60 GsLIs~~~VLTAAHC~~~~~~~~~~~~~~--~~V~~G~~~~~~------~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIA 131 (289)
T 2bdy_A 60 ASLISDRWVLTAAHCLLYPPWDKNFTEND--LLVRIGKHSRTR------YERNIEKISMLEKIYIHPRYNWRENLDRDIA 131 (289)
T ss_dssp EEECSSSEEEECGGGTEEGGGTEECCGGG--EEEEESCCBSSS------CCTTTCEEEEEEEEEECTTCBTTTTCBTCCE
T ss_pred EEEecCCEEEEcHHhcccCccccccCccc--EEEEEccccccc------cCCCcceeeeeEEEEECCCCCCCCCCCCeEE
Confidence 4555555 7899999864 2344433 344444422210 0111223445555542 24888
Q ss_pred EEEeecCCC--CceeeeEec
Q 004217 702 LVRVLPSAE--DEVNVACFH 719 (767)
Q Consensus 702 ~~~~~~~~~--~~~~~~~~~ 719 (767)
|++.-.... +.|.-+|.-
T Consensus 132 Ll~L~~pv~~~~~v~picLp 151 (289)
T 2bdy_A 132 LMKLKKPVAFSDYIHPVCLP 151 (289)
T ss_dssp EEEESSCCCCBTTBCCCBCC
T ss_pred EEEECCccccCCcccccCCC
Confidence 888543332 456667763
No 414
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=20.50 E-value=4.2e+02 Score=23.00 Aligned_cols=51 Identities=12% Similarity=0.083 Sum_probs=31.3
Q ss_pred EEEEEcCCCCEEEEEECCcEEEEEcCCCccccCCeEEecCCCCeEEEEEccCCCeEEEEEeeC
Q 004217 195 ASIAFHASGELLAVASGHKLYIWRYNMREETSSPRIVLRTRRSLRAVHFHPHAAPLLLTAEVN 257 (767)
Q Consensus 195 tsVafSPdG~~LAsgSdd~V~VWDl~t~~~~~~~~~l~~h~~~VtsVaFSPDG~~LlaSgsvw 257 (767)
..+.+..+|.+++...++.+ +|...+... ...+.+.+..||...+....+|
T Consensus 59 ~~l~l~~dGNLVl~d~~~~~-iW~S~t~~~-----------~~~~~~~L~~dGnlvly~~~~W 109 (113)
T 3mez_B 59 CFMRLGHSGELDITDDRLNT-VFVSNTVGQ-----------EGDYVLILQINGQAVVYGPAVW 109 (113)
T ss_dssp CEEEECTTSCEEEECTTSCE-EEECSCCCS-----------SSCCEEEECTTSCEEEECSEEE
T ss_pred EEEEEeCCCcEEEECCCCCE-EEECCCcCC-----------CCCEEEEEcCCceEEEecCCEe
Confidence 45778889998876544444 787655321 1124567888898666543344
No 415
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=20.46 E-value=2.2e+02 Score=32.76 Aligned_cols=57 Identities=16% Similarity=0.094 Sum_probs=40.6
Q ss_pred cEEEEEccCCCcEEEEEeCC------------CeEEEEECCCCeEEEee--cCCCCeEEEEEcCCCCEEEEE
Q 004217 152 PWVVRFHPLNPTIIASGSLD------------HEVRLWNASTAECIGSR--DFYRPIASIAFHASGELLAVA 209 (767)
Q Consensus 152 V~sLafsP~dg~lLaSgS~D------------GtVrIWDl~tg~~i~~l--~h~~~VtsVafSPdG~~LAsg 209 (767)
.-.|.|+| .+++++.-..+ ..+.+.+..+++..+.+ .....++.++|+||++.|++.
T Consensus 478 PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 46789999 77877764332 24566677777766554 356789999999999987765
Done!