BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004218
(767 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 159/313 (50%), Gaps = 29/313 (9%)
Query: 443 QMISYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIES-TGTWKSFFAE 501
+ S EL+ A+ NFS++N++G G FG VYKG L +G VAVK L E G F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 502 CEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNF 561
E + HRNL++L C + E L LVY ++ NGS+ + + E L++
Sbjct: 86 VEMISMAVHRNLLRLRGFCMT----PTERL-LVYPYMANGSVASCLR--ERPESQPPLDW 138
Query: 562 LERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGN 621
+R IA+ A L YLH+ C+ I+H D+K NILLDE+ A VGDFGLA+ + +
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-----D 193
Query: 622 QSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP---THESFAGE 678
++G+IG+I PEY K S DV+ +GVMLLE+ TG + +
Sbjct: 194 YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 253
Query: 679 VSLVKWVESNFP-KNAQQVLDRELRQLMMSSE-SQTIQLHDCLITIIESVGLSCTTESPG 736
V L+ WV+ K + ++D +L+ E Q IQ V L CT SP
Sbjct: 254 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQ-----------VALLCTQSSPM 302
Query: 737 GRIDIREALRRLK 749
R + E +R L+
Sbjct: 303 ERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 156/311 (50%), Gaps = 29/311 (9%)
Query: 445 ISYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST-GTWKSFFAECE 503
S EL+ A+ NF ++N++G G FG VYKG L +G VAVK L E T G F E E
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLE 563
+ HRNL++L C + + LVY ++ NGS+ + + E L++ +
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTER-----LLVYPYMANGSVASCLR--ERPESQPPLDWPK 132
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
R IA+ A L YLH+ C+ I+H D+K NILLDE+ A VGDFGLA+ + +
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-----DYK 187
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP---THESFAGEVS 680
++G IG+I PEY K S DV+ +GVMLLE+ TG + +V
Sbjct: 188 DXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 247
Query: 681 LVKWVESNFP-KNAQQVLDRELRQLMMSSE-SQTIQLHDCLITIIESVGLSCTTESPGGR 738
L+ WV+ K + ++D +L+ E Q IQ V L CT SP R
Sbjct: 248 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQ-----------VALLCTQSSPMER 296
Query: 739 IDIREALRRLK 749
+ E +R L+
Sbjct: 297 PKMSEVVRMLE 307
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 190/400 (47%), Gaps = 64/400 (16%)
Query: 4 LVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLL 63
L +L ++SN IP+ +GD L + NK +G ++ T ++++ ++ N
Sbjct: 199 LEFLDVSSNNFSTGIPF-LGD-CSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 256
Query: 64 EGTVPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPE 123
G +PP LP L +L+ N+F GEIP+
Sbjct: 257 VGPIPP----LPL----------------------------KSLQYLSLAENKFTGEIPD 284
Query: 124 SIGNLSNVLSKLYMGGNRFYGKIPTSIG-------------------------RLRSLTL 158
+ + L+ L + GN FYG +P G ++R L +
Sbjct: 285 FLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKV 344
Query: 159 LNLSYNSISGEILTEIGQLQ-ELQSLDLAGNQISGSI-PNTLGNLKK-LNQIDLSGNELA 215
L+LS+N SGE+ + L L +LDL+ N SG I PN N K L ++ L N
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 404
Query: 216 SEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLG 275
+IP + N L+S+ LS N L+G IP + SLS L + L N L+G +P+E+ +
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL-KLWLNMLEGEIPQELMYVK 463
Query: 276 NVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKL 335
+ T+ L N L+G +P+ NC +L + ++NN+ +G IP + L+ L +L LS+N
Sbjct: 464 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 523
Query: 336 SGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFRHTSMV 375
SG+IP++L + R+L L+L N G +P +F+ + +
Sbjct: 524 SGNIPAELGDCRSLIWLDLNTNLFNGTIP-AAMFKQSGKI 562
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 189/424 (44%), Gaps = 61/424 (14%)
Query: 12 NQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLT-NIQIIRMAHNLLEGTVPPG 70
N GE+P D K+ L + FN+F+G++P SL NL+ ++ + ++ N G + P
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 71 LGNLPF-----LKMYNIGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESI 125
L P L + N GF + +L+N + L L N G IP S+
Sbjct: 385 LCQNPKNTLQELYLQNNGFTGKIP---------PTLSNCSELVSLHLSFNYLSGTIPSSL 435
Query: 126 GNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDL 185
G+LS L L + N G+IP + +++L L L +N ++GEI + + L + L
Sbjct: 436 GSLSK-LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL 494
Query: 186 AGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKE 245
+ N+++G IP +G L+ L + LS N + IP G+ ++L+ +DL+ N NG IP
Sbjct: 495 SNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 554
Query: 246 ILSLS---------------------------------------------SLTTIVNLSK 260
+ S S N++
Sbjct: 555 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITS 614
Query: 261 NFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILA 320
G G+++ +D+S N LSG +P + L L + +N SG IP+ +
Sbjct: 615 RVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVG 674
Query: 321 ELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFRHTSMVHLEGN 380
+L+GL +LDLSSNKL G IP + L L ++L+ NNL G +P G F N
Sbjct: 675 DLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNN 734
Query: 381 PKLC 384
P LC
Sbjct: 735 PGLC 738
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 136/430 (31%), Positives = 198/430 (46%), Gaps = 57/430 (13%)
Query: 1 MTSLVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAH 60
+ SL YL LA N+ GEIP + L G + N F G +P + + ++ + ++
Sbjct: 265 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 324
Query: 61 NLLEGTVP-PGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLTN-STRLNFLAFDGNQFE 118
N G +P L + LK+ ++ FN+ G E SLTN S L L N F
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE------SLTNLSASLLTLDLSSNNFS 378
Query: 119 GEI-PESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQL 177
G I P N N L +LY+ N F GKIP ++ L L+LS+N +SG I + +G L
Sbjct: 379 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 438
Query: 178 QELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNK 237
+L+ L L N + G IP L +K L + L N+L EIP+ N NL I LSNN+
Sbjct: 439 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 498
Query: 238 LNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSF-- 295
L G IPK I L +L I+ LS N G +P E+G +++ +DL+ N +G +P +
Sbjct: 499 LTGEIPKWIGRLENL-AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 557
Query: 296 ------------------------KNCKSLEKLLMAN-------NKFSGPIP-NILAELK 323
K C LL N+ S P NI + +
Sbjct: 558 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVY 617
Query: 324 G------------LEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPRE-GIFR 370
G + LD+S N LSG IP ++ ++ L LNL N++ G +P E G R
Sbjct: 618 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR 677
Query: 371 HTSMVHLEGN 380
+++ L N
Sbjct: 678 GLNILDLSSN 687
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 64/268 (23%)
Query: 142 FYGKIPTSIGRLRSLTLLNLSYNSISGE-----ILTEIGQLQELQSLDLAGNQISGSIPN 196
F GK+ + +L SL +L+LS NSISG +L++ EL+ L ++GN+ISG +
Sbjct: 137 FPGKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSD--GCGELKHLAISGNKISGDV-- 191
Query: 197 TLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIV 256
+ L +D+S N ++ IP G+ L +D+S NKL+G+ + I + + L ++
Sbjct: 192 DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELK-LL 249
Query: 257 NLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIP 316
N+S N G +P LP KSL+ L +A NKF+G IP
Sbjct: 250 NISSNQFVGPIPP---------------------LP-----LKSLQYLSLAENKFTGEIP 283
Query: 317 NILA-ELKGLEVLDLSSNKLSGSIP-------------------------SDLQNLRALR 350
+ L+ L LDLS N G++P L +R L+
Sbjct: 284 DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK 343
Query: 351 SLNLTFNNLEGVVPREGIFRHTSMVHLE 378
L+L+FN G +P S++ L+
Sbjct: 344 VLDLSFNEFSGELPESLTNLSASLLTLD 371
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 43/246 (17%)
Query: 129 SNVLSKLYMGGNRFYGKIPT--SIGRLRSLTLLNLSYNSIS--GEILTEIGQLQELQSLD 184
S L+ L + N G + T S+G L LN+S N++ G++ + +L L+ LD
Sbjct: 96 SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLD 154
Query: 185 LAGNQISGSIPNTLG-----NLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLN 239
L+ N ISG+ N +G +L + +SGN+++ ++ S NL +D+S+N +
Sbjct: 155 LSANSISGA--NVVGWVLSDGCGELKHLAISGNKISGDVDVS--RCVNLEFLDVSSNNFS 210
Query: 240 GNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCK 299
IP FL G + +D+S N LSG+ + C
Sbjct: 211 TGIP------------------FL--------GDCSALQHLDISGNKLSGDFSRAISTCT 244
Query: 300 SLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQN-LRALRSLNLTFNN 358
L+ L +++N+F GPIP + LK L+ L L+ NK +G IP L L L+L+ N+
Sbjct: 245 ELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNH 302
Query: 359 LEGVVP 364
G VP
Sbjct: 303 FYGAVP 308
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MTSLVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAH 60
M L L L N + G IP +VGD L L + NK G+IP ++ LT + I +++
Sbjct: 652 MPYLFILNLGHNDISGSIPDEVGD-LRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 710
Query: 61 NLLEGTVP 68
N L G +P
Sbjct: 711 NNLSGPIP 718
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 230 SIDLSNNKLNGNIPKEILSLSSLTTIVN--LSKNFLDGTLPEEIGMLGNVVTIDLSANGL 287
SIDLS+ LN SL SLT + + LS + ++G++ ++ ++DLS N L
Sbjct: 51 SIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSV-SGFKCSASLTSLDLSRNSL 109
Query: 288 SGNLP--NSFKNCKSLEKLLMANN--KFSGPIPNILAELKGLEVLDLSSNKLSGS 338
SG + S +C L+ L +++N F G + L +L LEVLDLS+N +SG+
Sbjct: 110 SGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGA 163
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 190/400 (47%), Gaps = 64/400 (16%)
Query: 4 LVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLL 63
L +L ++SN IP+ +GD L + NK +G ++ T ++++ ++ N
Sbjct: 202 LEFLDVSSNNFSTGIPF-LGD-CSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 64 EGTVPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPE 123
G +PP LP L +L+ N+F GEIP+
Sbjct: 260 VGPIPP----LPL----------------------------KSLQYLSLAENKFTGEIPD 287
Query: 124 SIGNLSNVLSKLYMGGNRFYGKIPTSIG-------------------------RLRSLTL 158
+ + L+ L + GN FYG +P G ++R L +
Sbjct: 288 FLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKV 347
Query: 159 LNLSYNSISGEILTEIGQLQ-ELQSLDLAGNQISGSI-PNTLGNLKK-LNQIDLSGNELA 215
L+LS+N SGE+ + L L +LDL+ N SG I PN N K L ++ L N
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 216 SEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLG 275
+IP + N L+S+ LS N L+G IP + SLS L + L N L+G +P+E+ +
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL-KLWLNMLEGEIPQELMYVK 466
Query: 276 NVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKL 335
+ T+ L N L+G +P+ NC +L + ++NN+ +G IP + L+ L +L LS+N
Sbjct: 467 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 526
Query: 336 SGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFRHTSMV 375
SG+IP++L + R+L L+L N G +P +F+ + +
Sbjct: 527 SGNIPAELGDCRSLIWLDLNTNLFNGTIP-AAMFKQSGKI 565
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 189/424 (44%), Gaps = 61/424 (14%)
Query: 12 NQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLT-NIQIIRMAHNLLEGTVPPG 70
N GE+P D K+ L + FN+F+G++P SL NL+ ++ + ++ N G + P
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 71 LGNLPF-----LKMYNIGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESI 125
L P L + N GF + +L+N + L L N G IP S+
Sbjct: 388 LCQNPKNTLQELYLQNNGFTGKIP---------PTLSNCSELVSLHLSFNYLSGTIPSSL 438
Query: 126 GNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDL 185
G+LS L L + N G+IP + +++L L L +N ++GEI + + L + L
Sbjct: 439 GSLSK-LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL 497
Query: 186 AGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKE 245
+ N+++G IP +G L+ L + LS N + IP G+ ++L+ +DL+ N NG IP
Sbjct: 498 SNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557
Query: 246 ILSLS---------------------------------------------SLTTIVNLSK 260
+ S S N++
Sbjct: 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITS 617
Query: 261 NFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILA 320
G G+++ +D+S N LSG +P + L L + +N SG IP+ +
Sbjct: 618 RVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVG 677
Query: 321 ELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFRHTSMVHLEGN 380
+L+GL +LDLSSNKL G IP + L L ++L+ NNL G +P G F N
Sbjct: 678 DLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNN 737
Query: 381 PKLC 384
P LC
Sbjct: 738 PGLC 741
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 136/430 (31%), Positives = 198/430 (46%), Gaps = 57/430 (13%)
Query: 1 MTSLVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAH 60
+ SL YL LA N+ GEIP + L G + N F G +P + + ++ + ++
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 327
Query: 61 NLLEGTVP-PGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLTN-STRLNFLAFDGNQFE 118
N G +P L + LK+ ++ FN+ G E SLTN S L L N F
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE------SLTNLSASLLTLDLSSNNFS 381
Query: 119 GEI-PESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQL 177
G I P N N L +LY+ N F GKIP ++ L L+LS+N +SG I + +G L
Sbjct: 382 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 441
Query: 178 QELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNK 237
+L+ L L N + G IP L +K L + L N+L EIP+ N NL I LSNN+
Sbjct: 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 501
Query: 238 LNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSF-- 295
L G IPK I L +L I+ LS N G +P E+G +++ +DL+ N +G +P +
Sbjct: 502 LTGEIPKWIGRLENL-AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560
Query: 296 ------------------------KNCKSLEKLLMAN-------NKFSGPIP-NILAELK 323
K C LL N+ S P NI + +
Sbjct: 561 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVY 620
Query: 324 G------------LEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPRE-GIFR 370
G + LD+S N LSG IP ++ ++ L LNL N++ G +P E G R
Sbjct: 621 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR 680
Query: 371 HTSMVHLEGN 380
+++ L N
Sbjct: 681 GLNILDLSSN 690
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 64/268 (23%)
Query: 142 FYGKIPTSIGRLRSLTLLNLSYNSISGE-----ILTEIGQLQELQSLDLAGNQISGSIPN 196
F GK+ + +L SL +L+LS NSISG +L++ EL+ L ++GN+ISG +
Sbjct: 140 FPGKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSD--GCGELKHLAISGNKISGDV-- 194
Query: 197 TLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIV 256
+ L +D+S N ++ IP G+ L +D+S NKL+G+ + I + + L ++
Sbjct: 195 DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELK-LL 252
Query: 257 NLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIP 316
N+S N G +P LP KSL+ L +A NKF+G IP
Sbjct: 253 NISSNQFVGPIPP---------------------LP-----LKSLQYLSLAENKFTGEIP 286
Query: 317 NILA-ELKGLEVLDLSSNKLSGSIP-------------------------SDLQNLRALR 350
+ L+ L LDLS N G++P L +R L+
Sbjct: 287 DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK 346
Query: 351 SLNLTFNNLEGVVPREGIFRHTSMVHLE 378
L+L+FN G +P S++ L+
Sbjct: 347 VLDLSFNEFSGELPESLTNLSASLLTLD 374
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 43/246 (17%)
Query: 129 SNVLSKLYMGGNRFYGKIPT--SIGRLRSLTLLNLSYNSIS--GEILTEIGQLQELQSLD 184
S L+ L + N G + T S+G L LN+S N++ G++ + +L L+ LD
Sbjct: 99 SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLD 157
Query: 185 LAGNQISGSIPNTLG-----NLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLN 239
L+ N ISG+ N +G +L + +SGN+++ ++ S NL +D+S+N +
Sbjct: 158 LSANSISGA--NVVGWVLSDGCGELKHLAISGNKISGDVDVS--RCVNLEFLDVSSNNFS 213
Query: 240 GNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCK 299
IP FL G + +D+S N LSG+ + C
Sbjct: 214 TGIP------------------FL--------GDCSALQHLDISGNKLSGDFSRAISTCT 247
Query: 300 SLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQN-LRALRSLNLTFNN 358
L+ L +++N+F GPIP + LK L+ L L+ NK +G IP L L L+L+ N+
Sbjct: 248 ELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNH 305
Query: 359 LEGVVP 364
G VP
Sbjct: 306 FYGAVP 311
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 1 MTSLVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAH 60
M L L L N + G IP +VGD L L + NK G+IP ++ LT + I +++
Sbjct: 655 MPYLFILNLGHNDISGSIPDEVGD-LRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713
Query: 61 NLLEGTVP 68
N L G +P
Sbjct: 714 NNLSGPIP 721
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 230 SIDLSNNKLNGNIPKEILSLSSLTTIVN--LSKNFLDGTLPEEIGMLGNVVTIDLSANGL 287
SIDLS+ LN SL SLT + + LS + ++G++ ++ ++DLS N L
Sbjct: 54 SIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSV-SGFKCSASLTSLDLSRNSL 112
Query: 288 SGNLP--NSFKNCKSLEKLLMANN--KFSGPIPNILAELKGLEVLDLSSNKLSGS 338
SG + S +C L+ L +++N F G + L +L LEVLDLS+N +SG+
Sbjct: 113 SGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGA 166
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 142/255 (55%), Gaps = 22/255 (8%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT 508
+L AT NF H+ LIG G FG VYKG LR+G VA+K ES+ + F E E L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 509 RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIA 568
RH +LV LI C D +N + L+Y+++ NG+L ++G + +++ +RL I
Sbjct: 93 RHPHLVSLIGFC---DERNE--MILIYKYMENGNLKRHLYG--SDLPTMSMSWEQRLEIC 145
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
I A L YLH I+H D+K NILLDE+ K+ DFG+++ E + T
Sbjct: 146 IGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTE-------LDQT 195
Query: 629 H---VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE-VSLVKW 684
H V+KG++GYI PEY + + + DVYSFGV+L E+ S +S E V+L +W
Sbjct: 196 HLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW 255
Query: 685 -VESNFPKNAQQVLD 698
VES+ +Q++D
Sbjct: 256 AVESHNNGQLEQIVD 270
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 142/255 (55%), Gaps = 22/255 (8%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT 508
+L AT NF H+ LIG G FG VYKG LR+G VA+K ES+ + F E E L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 509 RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIA 568
RH +LV LI C D +N + L+Y+++ NG+L ++G + +++ +RL I
Sbjct: 93 RHPHLVSLIGFC---DERNE--MILIYKYMENGNLKRHLYG--SDLPTMSMSWEQRLEIC 145
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
I A L YLH I+H D+K NILLDE+ K+ DFG+++ E + T
Sbjct: 146 IGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTE-------LGQT 195
Query: 629 H---VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE-VSLVKW 684
H V+KG++GYI PEY + + + DVYSFGV+L E+ S +S E V+L +W
Sbjct: 196 HLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW 255
Query: 685 -VESNFPKNAQQVLD 698
VES+ +Q++D
Sbjct: 256 AVESHNNGQLEQIVD 270
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 144/287 (50%), Gaps = 32/287 (11%)
Query: 102 TNSTRLNFLAFDGNQFEGE--IPESIGNLSNVLSKLYMGG-NRFYGKIPTSIGRLRSLTL 158
T + R+N L G IP S+ NL L+ LY+GG N G IP +I +L L
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLP-YLNFLYIGGINNLVGPIPPAIAKLTQLHY 105
Query: 159 LNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEI 218
L +++ ++SG I + Q++ L +LD + N +SG++P ++ +L L I GN ++ I
Sbjct: 106 LYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAI 165
Query: 219 PTSFGNFQNLL-SIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNV 277
P S+G+F L S+ +S N+L G IP T NL N+
Sbjct: 166 PDSYGSFSKLFTSMTISRNRLTGKIPP---------TFANL-----------------NL 199
Query: 278 VTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSG 337
+DLS N L G+ F + K+ +K+ +A N + + + K L LDL +N++ G
Sbjct: 200 AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKV-GLSKNLNGLDLRNNRIYG 258
Query: 338 SIPSDLQNLRALRSLNLTFNNLEGVVPREGIFRHTSMVHLEGNPKLC 384
++P L L+ L SLN++FNNL G +P+ G + + N LC
Sbjct: 259 TLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLC 305
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 12/230 (5%)
Query: 19 PYDVGDKLPNLLGFNFCF----NKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNL 74
PY + L NL NF + N G IP ++ LT + + + H + G +P L +
Sbjct: 65 PYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI 124
Query: 75 PFLKMYNIGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSK 134
L + +N + G+ +S + +L T FDGN+ G IP+S G+ S + +
Sbjct: 125 KTLVTLDFSYNALSGTLPPSISSLPNLVGIT------FDGNRISGAIPDSYGSFSKLFTS 178
Query: 135 LYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSI 194
+ + NR GKIP + L +L ++LS N + G+ G + Q + LA N ++ +
Sbjct: 179 MTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237
Query: 195 PNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPK 244
+G K LN +DL N + +P + L S+++S N L G IP+
Sbjct: 238 -GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 60/214 (28%)
Query: 1 MTSLVYLGLASNQLWGEIPYDVGDKLPNLLGFNF-------------------------C 35
+ +LV L + N L G +P + LPNL+G F
Sbjct: 124 IKTLVTLDFSYNALSGTLPPSIS-SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS 182
Query: 36 FNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIGFNKIVGSGDEGL 95
N+ TGKIP + NL N+ + ++ N+LEG ++ D+
Sbjct: 183 RNRLTGKIPPTFANL-NLAFVDLSRNMLEGDA------------------SVLFGSDKNT 223
Query: 96 SFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRS 155
I NS LAFD G++ LS L+ L + NR YG +P + +L+
Sbjct: 224 QKIHLAKNS-----LAFD----LGKV-----GLSKNLNGLDLRNNRIYGTLPQGLTQLKF 269
Query: 156 LTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQ 189
L LN+S+N++ GEI + G LQ A N+
Sbjct: 270 LHSLNVSFNNLCGEI-PQGGNLQRFDVSAYANNK 302
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 132/254 (51%), Gaps = 30/254 (11%)
Query: 430 KPIGVSTLFKHSPQMISYDELRRATGNFSHE------NLIGSGSFGSVYKGYLREGISVA 483
K + VS HS S+ EL+ T NF N +G G FG VYKGY+ +VA
Sbjct: 3 KSLEVSDTRFHS---FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVA 58
Query: 484 VK----VLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLG 539
VK ++DI + + F E + + +H NLV+L+ S D L LVY ++
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD-----LCLVYVYMP 113
Query: 540 NGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD 599
NGSL D + + L++ R IA A+ +++LH + + H D+K NILLD
Sbjct: 114 NGSLLDRLSCL---DGTPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLD 167
Query: 600 EDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGV 659
E TAK+ DFGLAR+ E+ Q+ + S V G+ Y+ PE GE + D+YSFGV
Sbjct: 168 EAFTAKISDFGLARA-SEKFA-QTVMXSRIV--GTTAYMAPEALRGE-ITPKSDIYSFGV 222
Query: 660 MLLEIFTGMSPTHE 673
+LLEI TG+ E
Sbjct: 223 VLLEIITGLPAVDE 236
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 131/254 (51%), Gaps = 30/254 (11%)
Query: 430 KPIGVSTLFKHSPQMISYDELRRATGNFSHE------NLIGSGSFGSVYKGYLREGISVA 483
K + VS HS S+ EL+ T NF N +G G FG VYKGY+ +VA
Sbjct: 3 KSLEVSDTRFHS---FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVA 58
Query: 484 VK----VLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLG 539
VK ++DI + + F E + + +H NLV+L+ S D L LVY ++
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD-----LCLVYVYMP 113
Query: 540 NGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD 599
NGSL D + + L++ R IA A+ +++LH + + H D+K NILLD
Sbjct: 114 NGSLLDRLSCL---DGTPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLD 167
Query: 600 EDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGV 659
E TAK+ DFGLAR+ E+ ++ ++ G+ Y+ PE GE + D+YSFGV
Sbjct: 168 EAFTAKISDFGLARA-SEKFAQ--TVMXXRIV-GTTAYMAPEALRGE-ITPKSDIYSFGV 222
Query: 660 MLLEIFTGMSPTHE 673
+LLEI TG+ E
Sbjct: 223 VLLEIITGLPAVDE 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 122/238 (51%), Gaps = 27/238 (11%)
Query: 446 SYDELRRATGNFSHE------NLIGSGSFGSVYKGYLREGISVAVK----VLDIESTGTW 495
S+ EL+ T NF N +G G FG VYKGY+ +VAVK ++DI +
Sbjct: 10 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELK 68
Query: 496 KSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEH 555
+ F E + + +H NLV+L+ S D L LVY ++ NGSL D + +
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDD-----LCLVYVYMPNGSLLDRLSCL---DG 120
Query: 556 GNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615
L++ R IA A+ +++LH + + H D+K NILLDE TAK+ DFGLAR+
Sbjct: 121 TPPLSWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARA- 176
Query: 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673
E+ + G+ Y+ PE GE + D+YSFGV+LLEI TG+ E
Sbjct: 177 SEKFAQXVMXXR---IVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDE 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 119/239 (49%), Gaps = 27/239 (11%)
Query: 445 ISYDELRRATGNFSHE------NLIGSGSFGSVYKGYLREGISVAVK----VLDIESTGT 494
S+ EL+ T NF N G G FG VYKGY+ +VAVK ++DI +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 64
Query: 495 WKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNE 554
+ F E + +H NLV+L+ S D L LVY + NGSL D + +
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDD-----LCLVYVYXPNGSLLDRLSCL---D 116
Query: 555 HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614
L++ R IA A+ +++LH + + H D+K NILLDE TAK+ DFGLAR+
Sbjct: 117 GTPPLSWHXRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARA 173
Query: 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673
E+ S + G+ Y PE GE + D+YSFGV+LLEI TG+ E
Sbjct: 174 -SEKFAQXVXXSR---IVGTTAYXAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAVDE 227
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 106/211 (50%), Gaps = 20/211 (9%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
IG+GSFG+V++ G VAVK+L D + F E ++ RH N+V + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERV-NEFLREVAIMKRLRHPNIVLFMGA 102
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
+ L++V E+L GSL +H E L+ RL++A D+A ++YLH
Sbjct: 103 VT-----QPPNLSIVTEYLSRGSLYRLLHKSGAREQ---LDERRRLSMAYDVAKGMNYLH 154
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
N PIVH DLK N+L+D+ T KV DFGL+R S + G+ ++
Sbjct: 155 NR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL------KASXFLXSKXAAGTPEWMA 207
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
PE E + DVYSFGV+L E+ T P
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
IG+GSFG+V++ G VAVK+L D + F E ++ RH N+V + +
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERV-NEFLREVAIMKRLRHPNIVLFMGA 102
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
+ L++V E+L GSL +H E L+ RL++A D+A ++YLH
Sbjct: 103 VT-----QPPNLSIVTEYLSRGSLYRLLHKSGAREQ---LDERRRLSMAYDVAKGMNYLH 154
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
N PIVH +LK N+L+D+ T KV DFGL+R S+ S+ G+ ++
Sbjct: 155 NR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL------KASTFLSSKSAAGTPEWMA 207
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
PE E + DVYSFGV+L E+ T P
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 33/234 (14%)
Query: 446 SYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST--GTWKSFFAECE 503
S D+ G + IGSGSFG+VYKG VAVK+L++ + ++F E
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVG 76
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFL 562
LR TRH N++ + + LA+V ++ SL +H E K E +
Sbjct: 77 VLRKTRHVNILLF------MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFE------MI 124
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++IA A +DYLH I+H DLK NI L ED+T K+GDFGLA +
Sbjct: 125 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA-------TEK 174
Query: 623 SSISSTH---VLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
S S +H L GSI ++ PE + S DVY+FG++L E+ TG P
Sbjct: 175 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 33/234 (14%)
Query: 446 SYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST--GTWKSFFAECE 503
S D+ G + IGSGSFG+VYKG VAVK+L++ + ++F E
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFL 562
LR TRH N++ + + LA+V ++ SL +H E K E +
Sbjct: 85 VLRKTRHVNILLF------MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFE------MI 132
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++IA A +DYLH I+H DLK NI L ED+T K+GDFGLA +
Sbjct: 133 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA-------TEK 182
Query: 623 SSISSTH---VLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
S S +H L GSI ++ PE + S DVY+FG++L E+ TG P
Sbjct: 183 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 33/234 (14%)
Query: 446 SYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST--GTWKSFFAECE 503
S D+ G + IGSGSFG+VYKG VAVK+L++ + ++F E
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVG 58
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFL 562
LR TRH N++ + + LA+V ++ SL +H E K E +
Sbjct: 59 VLRKTRHVNILLF------MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFE------MI 106
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++IA A +DYLH I+H DLK NI L ED+T K+GDFGLA +
Sbjct: 107 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------K 156
Query: 623 SSISSTH---VLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
S S +H L GSI ++ PE + S DVY+FG++L E+ TG P
Sbjct: 157 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 114/232 (49%), Gaps = 33/232 (14%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST--GTWKSFFAECEAL 505
D+ G + IGSGSFG+VYKG VAVK+L++ + ++F E L
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFLER 564
R TRH N++ + + LA+V ++ SL +H E K E ++
Sbjct: 59 RKTRHVNILLF------MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFE------MIKL 106
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
++IA A +DYLH I+H DLK NI L ED+T K+GDFGLA +S
Sbjct: 107 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA-------TEKSR 156
Query: 625 ISSTH---VLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
S +H L GSI ++ PE + S DVY+FG++L E+ TG P
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 33/234 (14%)
Query: 446 SYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTG--TWKSFFAECE 503
S D+ G + IGSGSFG+VYKG VAVK+L++ + ++F E
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVG 61
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFL 562
LR TRH N++ + + LA+V ++ SL +H E K E +
Sbjct: 62 VLRKTRHVNILLF------MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFE------MI 109
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++IA A +DYLH I+H DLK NI L ED+T K+GDFGLA +
Sbjct: 110 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------K 159
Query: 623 SSISSTH---VLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
S S +H L GSI ++ PE + S DVY+FG++L E+ TG P
Sbjct: 160 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 33/234 (14%)
Query: 446 SYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST--GTWKSFFAECE 503
S D+ G + IGSGSFG+VYKG VAVK+L++ + ++F E
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVG 61
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFL 562
LR TRH N++ + + LA+V ++ SL +H E K E +
Sbjct: 62 VLRKTRHVNILLF------MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFE------MI 109
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++IA A +DYLH I+H DLK NI L ED+T K+GDFGLA +
Sbjct: 110 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------K 159
Query: 623 SSISSTH---VLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
S S +H L GSI ++ PE + S DVY+FG++L E+ TG P
Sbjct: 160 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 33/234 (14%)
Query: 446 SYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST--GTWKSFFAECE 503
S D+ G + IGSGSFG+VYKG VAVK+L++ + ++F E
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVG 83
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFL 562
LR TRH N++ + + LA+V ++ SL +H E K E +
Sbjct: 84 VLRKTRHVNILLF------MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFE------MI 131
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++IA A +DYLH I+H DLK NI L ED+T K+GDFGLA +
Sbjct: 132 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------K 181
Query: 623 SSISSTH---VLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
S S +H L GSI ++ PE + S DVY+FG++L E+ TG P
Sbjct: 182 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 114/232 (49%), Gaps = 33/232 (14%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST--GTWKSFFAECEAL 505
D+ G + IGSGSFG+VYKG VAVK+L++ + ++F E L
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFLER 564
R TRH N++ + + LA+V ++ SL +H E K E ++
Sbjct: 59 RKTRHVNILLF------MGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFE------MIKL 106
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
++IA A +DYLH I+H DLK NI L ED+T K+GDFGLA +S
Sbjct: 107 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------KSR 156
Query: 625 ISSTH---VLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
S +H L GSI ++ PE + S DVY+FG++L E+ TG P
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 115/234 (49%), Gaps = 33/234 (14%)
Query: 446 SYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST--GTWKSFFAECE 503
S D+ G + IGSGSFG+VYKG VAVK+L++ + ++F E
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFL 562
LR TRH N++ + + LA+V ++ SL +H E K E +
Sbjct: 85 VLRKTRHVNILLF------MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFE------MI 132
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++IA A +DYLH I+H DLK NI L ED+T K+GDFGLA +
Sbjct: 133 KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------K 182
Query: 623 SSISSTH---VLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
S S +H L GSI ++ PE + S DVY+FG++L E+ TG P
Sbjct: 183 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 114/232 (49%), Gaps = 33/232 (14%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTG--TWKSFFAECEAL 505
D+ G + IGSGSFG+VYKG VAVK+L++ + ++F E L
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFLER 564
R TRH N++ + + LA+V ++ SL +H E K E ++
Sbjct: 59 RKTRHVNILLF------MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFE------MIKL 106
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
++IA A +DYLH I+H DLK NI L ED+T K+GDFGLA +S
Sbjct: 107 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-------KSR 156
Query: 625 ISSTH---VLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
S +H L GSI ++ PE + S DVY+FG++L E+ TG P
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 110/233 (47%), Gaps = 31/233 (13%)
Query: 446 SYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST--GTWKSFFAECE 503
S D+ G + IGSGSFG+VYKG VAVK+L++ + ++F E
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLE 563
LR TRH N++ + + LA+V ++ SL +H +
Sbjct: 73 VLRKTRHVNILLF------MGYSTKPQLAIVTQWCEGSSLYHHLHASETK-----FEMKK 121
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
++IA A +DYLH I+H DLK NI L ED T K+GDFGLA +S
Sbjct: 122 LIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLA-------TEKS 171
Query: 624 SISSTH---VLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
S +H L GSI ++ PE + S DVY+FG++L E+ TG P
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 23/212 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAV-KVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
IGSGSFG+VYKG ++V + KV+D + +++F E LR TRH N++
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLF----- 97
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
+ + + LA+V ++ SL +H + + ++IA A +DYLH
Sbjct: 98 -MGYMTKDNLAIVTQWCEGSSLYKHLHVQE-----TKFQMFQLIDIARQTAQGMDYLHAK 151
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
I+H D+K NI L E +T K+GDFGLA G+Q T GS+ ++ PE
Sbjct: 152 N---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT----GSVLWMAPE 204
Query: 642 YGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
+ S DVYS+G++L E+ TG P
Sbjct: 205 VIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 110/233 (47%), Gaps = 31/233 (13%)
Query: 446 SYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST--GTWKSFFAECE 503
S D+ G + IGSGSFG+VYKG VAVK+L++ + ++F E
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVG 60
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLE 563
LR TRH N++ + + LA+V ++ SL +H +
Sbjct: 61 VLRKTRHVNILLF------MGYSTKPQLAIVTQWCEGSSLYHHLHASETK-----FEMKK 109
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
++IA A +DYLH I+H DLK NI L ED T K+GDFGLA +S
Sbjct: 110 LIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATV-------KS 159
Query: 624 SISSTH---VLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
S +H L GSI ++ PE + S DVY+FG++L E+ TG P
Sbjct: 160 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 109/231 (47%), Gaps = 31/231 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST--GTWKSFFAECEAL 505
D+ G + IGSGSFG+VYKG VAVK+L++ + ++F E L
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
R TRH N++ + + LA+V ++ SL +H + +
Sbjct: 75 RKTRHVNILLF------MGYSTAPQLAIVTQWCEGSSLYHHLHASETK-----FEMKKLI 123
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+IA A +DYLH I+H DLK NI L ED T K+GDFGLA +S
Sbjct: 124 DIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLA-------TEKSRW 173
Query: 626 SSTH---VLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSP 670
S +H L GSI ++ PE + S DVY+FG++L E+ TG P
Sbjct: 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G G FG V+ G VA+K L T + ++F E + ++ RH LV+L S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 75 ------EPIXIVTEYMSKGSLLDFLKGE----TGKYLRLPQLVDMAAQIASGMAYVER-- 122
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I + PE
Sbjct: 123 -MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEXTARQGAKFPIKWTAPEA 176
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
L + + DV+SFG++L E+ T
Sbjct: 177 ALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
E +G G FG V+ G VA+K L T + ++F E + ++ RH LV+L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
S E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 82 VSE------EPIYIVTEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I +
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTA 183
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE L + + DV+SFG++L E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
E +G G FG V+ G VA+K L T + ++F E + ++ RH LV+L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
S E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 82 VSE------EPIYIVIEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I +
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEXTARQGAKFPIKWTA 183
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE L + + DV+SFG++L E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
E +G G FG V+ G VA+K L T + ++F E + ++ RH LV+L
Sbjct: 14 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
S E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 73 VSE------EPIYIVTEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMAYVE 122
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I +
Sbjct: 123 R---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTA 174
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE L + + DV+SFG++L E+ T
Sbjct: 175 PEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G G FG V+ G VA+K L T + ++F E + ++ RH LV+L S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 85 ------EPIYIVIEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMAYVER-- 132
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I + PE
Sbjct: 133 -MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTAPEA 186
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
L + + DV+SFG++L E+ T
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G G FG V+ G VA+K L T + ++F E + ++ RH LV+L S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 78 ------EPIYIVTEYMSKGSLLDFLKGE----TGKYLRLPQLVDMAAQIASGMAYVER-- 125
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I + PE
Sbjct: 126 -MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTAPEA 179
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
L + + DV+SFG++L E+ T
Sbjct: 180 ALYGRFTIKSDVWSFGILLTELTT 203
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
E +G G FG V+ G VA+K L T + ++F E + ++ RH LV+L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
S E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 82 VSE------EPIYIVTEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I +
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTA 183
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE L + + DV+SFG++L E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G G FG V+ G VA+K L T + ++F E + ++ RH LV+L S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 74 ------EPIYIVTEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMAYVER-- 121
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I + PE
Sbjct: 122 -MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTAPEA 175
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
L + + DV+SFG++L E+ T
Sbjct: 176 ALYGRFTIKSDVWSFGILLTELTT 199
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G G FG V+ G VA+K L T + ++F E + ++ RH LV+L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 251 ------EPIYIVTEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVER-- 298
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I + PE
Sbjct: 299 -MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTAPEA 352
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
L + + DV+SFG++L E+ T
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
E +G G FG V+ G VA+K L T + ++F E + ++ RH LV+L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
S E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 82 VSE------EPIYIVCEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I +
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTA 183
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE L + + DV+SFG++L E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G G FG V+ G VA+K L T + ++F E + ++ RH LV+L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 251 ------EPIYIVTEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVER-- 298
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I + PE
Sbjct: 299 -MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTAPEA 352
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
L + + DV+SFG++L E+ T
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
E +G G FG V+ G VA+K L T + ++F E + ++ RH LV+L
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
S E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 331 VSE------EPIYIVTEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVE 380
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I +
Sbjct: 381 R---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTA 432
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE L + + DV+SFG++L E+ T
Sbjct: 433 PEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G G FG V+ G VA+K L T + ++F E + ++ RH LV+L S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 251 ------EPIYIVGEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVER-- 298
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I + PE
Sbjct: 299 -MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTAPEA 352
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
L + + DV+SFG++L E+ T
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
E +G G FG V+ G VA+K L T + ++F E + ++ RH LV+L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
S E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 82 VSE------EPIYIVTEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+ VH DL NIL+ E++ KV DFGLAR L+E + ++ K I +
Sbjct: 132 R---MNYVHRDLAAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTA 183
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE L + + DV+SFG++L E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
E +G G FG V+ G VA+K L T + ++F E + ++ RH LV+L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
S E + +V E++ G L D++ GE G L + +++A IAS + Y+
Sbjct: 82 VSE------EPIYIVMEYMSKGCLLDFLKGE----MGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I +
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTA 183
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE L + + DV+SFG++L E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 20/231 (8%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFA 500
P +YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLK 63
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLN 560
E ++ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E +N
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQE----VN 114
Query: 561 FLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIG 620
+ L +A I+SA++YL +H DL N L+ E+ KV DFGL+R +
Sbjct: 115 AVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM----- 166
Query: 621 NQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ ++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 167 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G G FG V+ G VA+K L T + ++F E + ++ RH LV+L S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + +V E++ GSL D++ GE G L + ++++ IAS + Y+
Sbjct: 82 ------EPIYIVTEYMNKGSLLDFLKGE----TGKYLRLPQLVDMSAQIASGMAYVER-- 129
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I + PE
Sbjct: 130 -MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTAPEA 183
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
L + + DV+SFG++L E+ T
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTT 207
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 22/232 (9%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFA 500
P +YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLK 63
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLN 560
E ++ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E +N
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VN 114
Query: 561 FLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIG 620
+ L +A I+SA++YL +H DL N L+ E+ KV DFGL+R +
Sbjct: 115 AVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM----- 166
Query: 621 NQSSISSTHV-LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ H K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 167 -TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 23/235 (9%)
Query: 438 FKHSPQMISYDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWK 496
F+ SP +YD+ + + ++ +G G +G VY+G + + ++VAVK L E T +
Sbjct: 12 FQGSP---NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVE 67
Query: 497 SFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHG 556
F E ++ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E
Sbjct: 68 EFLKEAAVMKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE-- 120
Query: 557 NGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
+N + L +A I+SA++YL +H DL N L+ E+ KV DFGL+R +
Sbjct: 121 --VNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM- 174
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ ++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 175 ----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 225
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 19/207 (9%)
Query: 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
E +G G FG V+ G VA+K L T + ++F E + ++ RH LV+L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
S E + +V E++ G L D++ GE G L + +++A IAS + Y+
Sbjct: 82 VSE------EPIYIVTEYMSKGCLLDFLKGE----MGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I +
Sbjct: 132 R---MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEYTARQGAKFPIKWTA 183
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE L + + DV+SFG++L E+ T
Sbjct: 184 PEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G G FG V+ G VA+K L T + ++F E + ++ RH LV+L S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + +V E++ GSL D++ GE G L + ++++ IAS + Y+
Sbjct: 82 ------EPIYIVTEYMNKGSLLDFLKGE----TGKYLRLPQLVDMSAQIASGMAYVER-- 129
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+ VH DL+ NIL+ E++ KV DFGLAR L+E + ++ K I + PE
Sbjct: 130 -MNYVHRDLRAANILVGENLVCKVADFGLAR-LIE----DNEWTARQGAKFPIKWTAPEA 183
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
L + + DV+SFG++L E+ T
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 20/231 (8%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFA 500
P +YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLK 63
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLN 560
E ++ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E +N
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VN 114
Query: 561 FLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIG 620
+ L +A I+SA++YL +H DL N L+ E+ KV DFGL+ R+
Sbjct: 115 AVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS-----RLM 166
Query: 621 NQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ ++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 167 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 20/231 (8%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFA 500
P +YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLK 63
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLN 560
E ++ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E +N
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VN 114
Query: 561 FLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIG 620
+ L +A I+SA++YL +H DL N L+ E+ KV DFGL+R +
Sbjct: 115 AVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM----- 166
Query: 621 NQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ ++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 167 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 114/227 (50%), Gaps = 22/227 (9%)
Query: 447 YDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEAL 505
YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F E +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 64
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
+ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E +N + L
Sbjct: 65 KEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQE----VNAVVLL 115
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+A I+SA++YL +H DL N L+ E+ KV DFGL+R +
Sbjct: 116 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGDT 166
Query: 626 SSTHV-LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ H K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 167 XTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 447 YDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEAL 505
YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F E +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 64
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
+ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E +N + L
Sbjct: 65 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VNAVVLL 115
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+A I+SA++YL +H DL N L+ E+ KV DFGL+R + +
Sbjct: 116 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 167
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 168 TAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 447 YDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEAL 505
YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F E +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 65
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
+ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E +N + L
Sbjct: 66 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VNAVVLL 116
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+A I+SA++YL +H DL N L+ E+ KV DFGL+R + +
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 168
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 169 TAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 447 YDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEAL 505
YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
+ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E +N + L
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VNAVVLL 114
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+A I+SA++YL +H DL N L+ E+ KV DFGL+R + +
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 166
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 447 YDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEAL 505
YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
+ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E +N + L
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VNAVVLL 114
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+A I+SA++YL +H DL N L+ E+ KV DFGL+R + +
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 166
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 447 YDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEAL 505
YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F E +
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 67
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
+ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E +N + L
Sbjct: 68 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VNAVVLL 118
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+A I+SA++YL +H DL N L+ E+ KV DFGL+R + +
Sbjct: 119 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 170
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 171 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 216
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 447 YDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEAL 505
YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F E +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 65
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
+ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E +N + L
Sbjct: 66 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VNAVVLL 116
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+A I+SA++YL +H DL N L+ E+ KV DFGL+R + +
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 168
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 169 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 447 YDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEAL 505
YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F E +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 65
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
+ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E +N + L
Sbjct: 66 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VNAVVLL 116
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+A I+SA++YL +H DL N L+ E+ KV DFGL+R + +
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 168
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 169 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 112/235 (47%), Gaps = 34/235 (14%)
Query: 463 IGSGSFGSVYKGYL------REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G+FG V+ ++ I VAVK L S K F E E L N +H ++VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNG-----LNFLERLNIAI 569
C D L +V+E++ +G L ++ HG G L + L+IA
Sbjct: 81 YGVCVEGDP-----LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLE----RIGNQSSI 625
IA+ + YL + VH DL N L+ E++ K+GDFG++R + R+G + +
Sbjct: 136 QIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEV 679
I ++PPE + K +T DV+S GV+L EIFT G P ++ EV
Sbjct: 193 --------PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G G FG V+ G VA+K L + ++F E + ++ RH LV+L S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + +V E++ GSL D++ GE G L + +++A IAS + Y+
Sbjct: 252 ------EPIYIVTEYMSKGSLLDFLKGE----MGKYLRLPQLVDMAAQIASGMAYVER-- 299
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+ VH DL+ NIL+ E++ KV DFGL R L+E + ++ K I + PE
Sbjct: 300 -MNYVHRDLRAANILVGENLVCKVADFGLGR-LIE----DNEYTARQGAKFPIKWTAPEA 353
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
L + + DV+SFG++L E+ T
Sbjct: 354 ALYGRFTIKSDVWSFGILLTELTT 377
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 117/231 (50%), Gaps = 20/231 (8%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFA 500
P +YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLK 63
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLN 560
E ++ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E ++
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VS 114
Query: 561 FLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIG 620
+ L +A I+SA++YL +H DL N L+ E+ KV DFGL+R +
Sbjct: 115 AVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM----- 166
Query: 621 NQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ ++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 167 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 447 YDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEAL 505
YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
+ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E ++ + L
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQE----VSAVVLL 114
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+A I+SA++YL +H DL N L+ E+ KV DFGL+R + +
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 166
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 447 YDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEAL 505
YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
+ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E ++ + L
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQE----VSAVVLL 114
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+A I+SA++YL +H DL N L+ E+ KV DFGL+R + +
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 166
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
IG G FG V G R G VAVK I++ T ++F AE + RH NLV+L+
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLL----G 66
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
+ + L +V E++ GSL D++ ++ G L ++D+ A++YL +
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC----LLKFSLDVCEAMEYLEGN- 121
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
VH DL N+L+ ED AKV DFGL + SS T L + + PE
Sbjct: 122 --NFVHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKL--PVKWTAPEA 170
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
+K ST DV+SFG++L EI++
Sbjct: 171 LREKKFSTKSDVWSFGILLWEIYS 194
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
IGSG FG V+ GY VA+K + E + + F E E + H LV+L C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC-- 91
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL-NIAIDIASALDYLHND 581
+ LV+EF+ +G L D++ +R GL E L + +D+ + YL
Sbjct: 92 ---LEQAPICLVFEFMEHGCLSDYLRTQR------GLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
C ++H DL N L+ E+ KV DFG+ R +L+ +S+ K + + PE
Sbjct: 143 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-----DQYTSSTGTKFPVKWASPE 194
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFT 666
+ S+ DV+SFGV++ E+F+
Sbjct: 195 VFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
IGSG FG V+ GY VA+K + E + + F E E + H LV+L C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-- 69
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL-NIAIDIASALDYLHND 581
+ LV+EF+ +G L D++ +R GL E L + +D+ + YL
Sbjct: 70 ---LEQAPICLVFEFMEHGCLSDYLRTQR------GLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
C ++H DL N L+ E+ KV DFG+ R +L+ +S+ K + + PE
Sbjct: 121 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-----DQYTSSTGTKFPVKWASPE 172
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFT 666
+ S+ DV+SFGV++ E+F+
Sbjct: 173 VFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
IGSG FG V+ GY VA+K + E + + F E E + H LV+L C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-- 71
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL-NIAIDIASALDYLHND 581
+ LV+EF+ +G L D++ +R GL E L + +D+ + YL
Sbjct: 72 ---LEQAPICLVFEFMEHGCLSDYLRTQR------GLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
C ++H DL N L+ E+ KV DFG+ R +L+ +S+ K + + PE
Sbjct: 123 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-----DQYTSSTGTKFPVKWASPE 174
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFT 666
+ S+ DV+SFGV++ E+F+
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 23/237 (9%)
Query: 436 TLFKHSPQMISYDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGT 494
T++ SP +YD+ + + ++ +G G +G VY+G + + ++VAVK L E T
Sbjct: 201 TVYGVSP---NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTME 256
Query: 495 WKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNE 554
+ F E ++ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E
Sbjct: 257 VEEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE 311
Query: 555 HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614
+N + L +A I+SA++YL +H +L N L+ E+ KV DFGL+R
Sbjct: 312 ----VNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRL 364
Query: 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ + ++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 365 M-----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 416
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 112/238 (47%), Gaps = 36/238 (15%)
Query: 463 IGSGSFGSVYKGYLREG----ISVAVKVLDI---ESTGTWKSFFAECEALRNTRHRNLVK 515
+G G +VY L E I VA+K + I E T K F E H+N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
+I D LV E++ +L ++I +NF ++ L
Sbjct: 76 MIDVDEEDDC-----YYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQI---------L 121
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
D + + ++ IVH D+KP NIL+D + T K+ DFG+A++L E +S++ T+ + G++
Sbjct: 122 DGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE-----TSLTQTNHVLGTV 176
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL---VKWVESNFP 690
Y PE GE D+YS G++L E+ G P F GE ++ +K ++ + P
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP----FNGETAVSIAIKHIQDSVP 230
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
IGSG FG V+ GY VA+K + E + + F E E + H LV+L C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-- 74
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL-NIAIDIASALDYLHND 581
+ LV+EF+ +G L D++ +R GL E L + +D+ + YL
Sbjct: 75 ---LEQAPICLVFEFMEHGCLSDYLRTQR------GLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
C ++H DL N L+ E+ KV DFG+ R +L+ +S+ K + + PE
Sbjct: 126 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-----DQYTSSTGTKFPVKWASPE 177
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFT 666
+ S+ DV+SFGV++ E+F+
Sbjct: 178 VFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 121/237 (51%), Gaps = 23/237 (9%)
Query: 436 TLFKHSPQMISYDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGT 494
T++ SP +YD+ + + ++ +G G +G VY+G + + ++VAVK L E T
Sbjct: 243 TVYGVSP---NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTME 298
Query: 495 WKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNE 554
+ F E ++ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E
Sbjct: 299 VEEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE 353
Query: 555 HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614
+N + L +A I+SA++YL +H +L N L+ E+ KV DFGL+R
Sbjct: 354 ----VNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRL 406
Query: 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ + ++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 407 M-----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 458
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 447 YDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEAL 505
YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
+ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E ++ + L
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VSAVVLL 114
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+A I+SA++YL +H DL N L+ E+ KV DFGL+R + +
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 166
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 447 YDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEAL 505
YD+ + + ++ +G G +G VY+G + + ++VAVK L E T + F E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 63
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
+ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E ++ + L
Sbjct: 64 KEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VSAVVLL 114
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+A I+SA++YL +H DL N L+ E+ KV DFGL+R + +
Sbjct: 115 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTY 166
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 448 DELRRATGNFSHENL-----IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAEC 502
DE R+ + + L IG G FG V G R G VAVK I++ T ++F AE
Sbjct: 9 DEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEA 65
Query: 503 EALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFL 562
+ RH NLV+L+ + + L +V E++ GSL D++ ++ G
Sbjct: 66 SVMTQLRHSNLVQLL----GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC--- 118
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
L ++D+ A++YL + VH DL N+L+ ED AKV DFGL +
Sbjct: 119 -LLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-------EA 167
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
SS T L + + PE +K ST DV+SFG++L EI++
Sbjct: 168 SSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 22/229 (9%)
Query: 445 ISYDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECE 503
+S D+ + + ++ +G G FG VY+G + + ++VAVK L E T + F E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAA 59
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLE 563
++ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E ++ +
Sbjct: 60 VMKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VSAVV 110
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
L +A I+SA++YL +H DL N L+ E+ KV DFGL+R +
Sbjct: 111 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM------TG 161
Query: 624 SISSTHV-LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ H K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 162 DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
IG G FG V G R G VAVK I++ T ++F AE + RH NLV+L+
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLL----G 253
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
+ + L +V E++ GSL D++ ++ G L ++D+ A++YL +
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC----LLKFSLDVCEAMEYLEGN- 308
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
VH DL N+L+ ED AKV DFGL + SS T L + + PE
Sbjct: 309 --NFVHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKL--PVKWTAPEA 357
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
+K ST DV+SFG++L EI++
Sbjct: 358 LREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 39/230 (16%)
Query: 463 IGSGSFGSVYKGYL------REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G+FG V+ ++ + VAVK L + K F E E L N +H ++VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDW-----------IHGERKNEHGNGLNFLERL 565
C D L +V+E++ +G L + + G+ + G L + L
Sbjct: 83 YGVCGDGDP-----LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE-LGLSQML 136
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLE----RIGN 621
+IA IAS + YL + VH DL N L+ ++ K+GDFG++R + R+G
Sbjct: 137 HIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGG 193
Query: 622 QSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ + I ++PPE + K +T DV+SFGV+L EIFT G P
Sbjct: 194 HTMLP--------IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 116/228 (50%), Gaps = 20/228 (8%)
Query: 445 ISYDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECE 503
+S D+ + + ++ +G G +G VY+G + + ++VAVK L E T + F E
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAA 59
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLE 563
++ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E ++ +
Sbjct: 60 VMKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE----VSAVV 110
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
L +A I+SA++YL +H DL N L+ E+ KV DFGL+R +
Sbjct: 111 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGD 162
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ ++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 163 TFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
IGSG FG V+ GY VA+K + E + + F E E + H LV+L C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-- 71
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL-NIAIDIASALDYLHND 581
+ LV+EF+ +G L D++ +R GL E L + +D+ + YL
Sbjct: 72 ---LEQAPICLVFEFMEHGCLSDYLRTQR------GLFAAETLLGMCLDVCEGMAYLE-- 120
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
E ++H DL N L+ E+ KV DFG+ R +L+ +S+ K + + PE
Sbjct: 121 -EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-----DQYTSSTGTKFPVKWASPE 174
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFT 666
+ S+ DV+SFGV++ E+F+
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 24/225 (10%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEALRN 507
E+ R H+ +G G +G VY+G + + ++VAVK L E T + F E ++
Sbjct: 7 EMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKE 63
Query: 508 TRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI 567
+H NLV+L+ C+ + F ++ EF+ G+L D++ + E ++ + L +
Sbjct: 64 IKHPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLRECNRQE----VSAVVLLYM 114
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISS 627
A I+SA++YL +H DL N L+ E+ KV DFGL+R + +
Sbjct: 115 ATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGDTXT 165
Query: 628 THV-LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
H K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
IGSG FG V+ GY VA+K + E + + F E E + H LV+L C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-- 72
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL-NIAIDIASALDYLHND 581
+ LV EF+ +G L D++ +R GL E L + +D+ + YL
Sbjct: 73 ---LEQAPICLVTEFMEHGCLSDYLRTQR------GLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
C ++H DL N L+ E+ KV DFG+ R +L+ +S+ K + + PE
Sbjct: 124 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-----DQYTSSTGTKFPVKWASPE 175
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFT 666
+ S+ DV+SFGV++ E+F+
Sbjct: 176 VFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 23/237 (9%)
Query: 436 TLFKHSPQMISYDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGT 494
T++ SP +YD+ + + ++ +G G +G VY+G + + ++VAVK L E T
Sbjct: 204 TIYGVSP---NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTME 259
Query: 495 WKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNE 554
+ F E ++ +H NLV+L+ C+ + F ++ EF+ G+L D++ + E
Sbjct: 260 VEEFLKEAAVMKEIKHPNLVQLLGVCT----REPPFY-IITEFMTYGNLLDYLRECNRQE 314
Query: 555 HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614
++ + L +A I+SA++YL +H +L N L+ E+ KV DFGL+R
Sbjct: 315 ----VSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRL 367
Query: 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ + ++ K I + PE K S DV++FGV+L EI T GMSP
Sbjct: 368 M-----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 419
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 108/247 (43%), Gaps = 31/247 (12%)
Query: 443 QMISYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAEC 502
MI Y E+ E ++G G+FG V K R VA+K IES K+F E
Sbjct: 4 HMIDYKEIEV-------EEVVGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVEL 53
Query: 503 EALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFL 562
L H N+VKL +C + + LV E+ GSL + +HG + +
Sbjct: 54 RQLSRVNHPNIVKLYGAC-------LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAH-- 104
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLERIGN 621
++ + + + YLH+ ++H DLKP N+LL T K+ DFG A + + N
Sbjct: 105 -AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN 163
Query: 622 QSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL 681
KGS ++ PE G S DV+S+G++L E+ T P E G
Sbjct: 164 N---------KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE-IGGPAFR 213
Query: 682 VKWVESN 688
+ W N
Sbjct: 214 IMWAVHN 220
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 108/247 (43%), Gaps = 31/247 (12%)
Query: 443 QMISYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAEC 502
MI Y E+ E ++G G+FG V K R VA+K IES K+F E
Sbjct: 3 HMIDYKEIEV-------EEVVGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVEL 52
Query: 503 EALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFL 562
L H N+VKL +C + + LV E+ GSL + +HG + +
Sbjct: 53 RQLSRVNHPNIVKLYGAC-------LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAH-- 103
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLERIGN 621
++ + + + YLH+ ++H DLKP N+LL T K+ DFG A + + N
Sbjct: 104 -AMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN 162
Query: 622 QSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL 681
KGS ++ PE G S DV+S+G++L E+ T P E G
Sbjct: 163 N---------KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE-IGGPAFR 212
Query: 682 VKWVESN 688
+ W N
Sbjct: 213 IMWAVHN 219
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT 508
EL+R E +GSG FG V G + VAVK++ E + + FF E + +
Sbjct: 4 ELKREEITLLKE--LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKL 60
Query: 509 RHRNLVKLITSCSSLDFKNMEF-LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI 567
H LVK CS E+ + +V E++ NG L +++ HG GL + L +
Sbjct: 61 SHPKLVKFYGVCSK------EYPIYIVTEYISNGCLLNYL-----RSHGKGLEPSQLLEM 109
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISS 627
D+ + +L + +H DL N L+D D+ KV DFG+ R +L + +SS
Sbjct: 110 CYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL----DDQYVSS 162
Query: 628 THVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
K + + PE K S+ DV++FG+++ E+F+
Sbjct: 163 VGT-KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 23/204 (11%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
IG G FG V G R G VAVK I++ T ++F AE + RH NLV+L+
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLL----G 72
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
+ + L +V E++ GSL D++ ++ G L ++D+ A++YL +
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC----LLKFSLDVCEAMEYLEGN- 127
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
VH DL N+L+ ED AKV DFGL + SS T L + + PE
Sbjct: 128 --NFVHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKL--PVKWTAPEA 176
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
ST DV+SFG++L EI++
Sbjct: 177 LREAAFSTKSDVWSFGILLWEIYS 200
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 86 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 132
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H DL+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIE----DNEXTAREGAKFPIKWTAPEA 187
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 188 INYGTF---TIKSDVWSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 88 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 134
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H DL+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 135 ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIE----DNEXTAREGAKFPIKWTAPEA 189
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 190 INYGTF---TIKSDVWSFGILLTEIVT 213
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 90 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 136
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H DL+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 137 ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIE----DNEYTAREGAKFPIKWTAPEA 191
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 192 INYGTF---TIKSDVWSFGILLTEIVT 215
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 89 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 135
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H DL+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 136 ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIE----DNEXTAREGAKFPIKWTAPEA 190
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 191 INYGTF---TIKSDVWSFGILLTEIVT 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 86 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 132
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H DL+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIE----DNEYTAREGAKFPIKWTAPEA 187
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 188 INYGTF---TIKSDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 85 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 131
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H DL+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 132 ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIE----DNEYTAREGAKFPIKWTAPEA 186
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 187 INYGTF---TIKSDVWSFGILLTEIVT 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 80 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 126
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H DL+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIE----DNEXTAREGAKFPIKWTAPEA 181
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 182 INYGTF---TIKSDVWSFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 82 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 128
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H DL+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 129 ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIE----DNEXTAREGAKFPIKWTAPEA 183
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 184 INYGTF---TIKSDVWSFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 81 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 127
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H DL+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 128 ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIE----DNEXTAREGAKFPIKWTAPEA 182
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 183 INYGTF---TIKSDVWSFGILLTEIVT 206
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 80 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 126
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H DL+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIE----DNEYTAREGAKFPIKWTAPEA 181
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 182 INYGTF---TIKSDVWSFGILLTEIVT 205
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 80 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 126
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H DL+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIE----DNEXTAREGAKFPIKWTAPEA 181
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 182 INYGTF---TIKSDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 75 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 121
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H DL+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 122 ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIE----DNEYTAREGAKFPIKWTAPEA 176
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 177 INYGTF---TIKSDVWSFGILLTEIVT 200
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ G VA+K L T + +SF E + ++ +H LV+L S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + +V E++ GSL D++ K+ G L +++A +A+ + Y+
Sbjct: 76 ------EPIYIVTEYMNKGSLLDFL----KDGEGRALKLPNLVDMAAQVAAGMAYIER-- 123
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+ +H DL+ NIL+ + K+ DFGLAR L+E + ++ K I + PE
Sbjct: 124 -MNYIHRDLRSANILVGNGLICKIADFGLAR-LIE----DNEXTARQGAKFPIKWTAPEA 177
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFT 666
L + + DV+SFG++L E+ T
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELVT 201
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V G R VA+K++ E + + F E + + N H LV+L C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 74
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
+ ++ E++ NG L +++ R L L + D+ A++YL +
Sbjct: 75 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESK- 124
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+H DL N L+++ KV DFGL+R +L+ +S+ K + + PPE
Sbjct: 125 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-----DEYTSSRGSKFPVRWSPPEV 177
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676
+ K S+ D+++FGV++ EI++ +E F
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 211
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 105/223 (47%), Gaps = 33/223 (14%)
Query: 460 ENLIGSGSFGSVYKGYLREGISVAVKVL----DIESTGTWKSFFAECEALRNTRHRNLVK 515
E +IG G FG VY+ + G VAVK D + + T ++ E + +H N++
Sbjct: 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L C L N L LV EF G L + G+R + L +N A+ IA +
Sbjct: 71 LRGVC--LKEPN---LCLVMEFARGGPLNRVLSGKRIPP-----DIL--VNWAVQIARGM 118
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDM--------TAKVGDFGLARSLLERIGNQSSISS 627
+YLH++ VPI+H DLK NIL+ + + K+ DFGLAR R S+
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE-WHRTTKMSA--- 174
Query: 628 THVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ ++ PE S DV+S+GV+L E+ TG P
Sbjct: 175 ----AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ H ++ ++ L I ++Y
Sbjct: 81 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQA-----HAERIDHIKLLQYTSQICKGMEY 132
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 186
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V G R VA+K++ E + + F E + + N H LV+L C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 74
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
+ ++ E++ NG L +++ R L L + D+ A++YL +
Sbjct: 75 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESK- 124
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+H DL N L+++ KV DFGL+R +L+ SS+ S K + + PPE
Sbjct: 125 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGS----KFPVRWSPPEV 177
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676
+ K S+ D+++FGV++ EI++ +E F
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 211
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V G R VA+K++ E + + F E + + N H LV+L C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 89
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
+ ++ E++ NG L +++ R L L + D+ A++YL +
Sbjct: 90 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESK- 139
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+H DL N L+++ KV DFGL+R +L+ SS+ S K + + PPE
Sbjct: 140 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EETSSVGS----KFPVRWSPPEV 192
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676
+ K S+ D+++FGV++ EI++ +E F
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 226
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V G R VA+K++ E + + F E + + N H LV+L C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 69
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
+ ++ E++ NG L +++ R L L + D+ A++YL +
Sbjct: 70 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESK- 119
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+H DL N L+++ KV DFGL+R +L+ SS+ S K + + PPE
Sbjct: 120 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGS----KFPVRWSPPEV 172
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676
+ K S+ D+++FGV++ EI++ +E F
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 206
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V G R VA+K++ E + + F E + + N H LV+L C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 73
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
+ ++ E++ NG L +++ R L L + D+ A++YL +
Sbjct: 74 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESK- 123
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+H DL N L+++ KV DFGL+R +L+ SS+ S K + + PPE
Sbjct: 124 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGS----KFPVRWSPPEV 176
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676
+ K S+ D+++FGV++ EI++ +E F
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 129
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 183
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 96 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 147
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 148 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 201
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 77 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 128
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 129 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 182
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 96 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 147
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 148 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 201
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 76 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 127
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 128 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 181
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 129
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 183
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 82 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 133
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 134 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 187
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 188 YAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 109 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 160
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 161 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 214
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 84 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 135
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 136 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 189
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 190 YAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 81 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 132
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 186
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 83 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 134
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 135 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 188
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 189 YAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 85 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 136
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 137 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 190
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 191 YAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 78 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 129
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEFFKVKEPGESPIFW 183
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 184 YAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V G R VA+K++ E + + F E + + N H LV+L C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 89
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
+ ++ E++ NG L +++ R L L + D+ A++YL +
Sbjct: 90 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESK- 139
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+H DL N L+++ KV DFGL+R +L+ SS+ S K + + PPE
Sbjct: 140 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGS----KFPVRWSPPEV 192
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676
+ K S+ D+++FGV++ EI++ +E F
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 226
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V G R VA+K++ E + + F E + + N H LV+L C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT- 80
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
+ ++ E++ NG L +++ R L L + D+ A++YL +
Sbjct: 81 ----KQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESK- 130
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
+H DL N L+++ KV DFGL+R +L+ SS+ S K + + PPE
Sbjct: 131 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVGS----KFPVRWSPPEV 183
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676
+ K S+ D+++FGV++ EI++ +E F
Sbjct: 184 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 217
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 123/261 (47%), Gaps = 25/261 (9%)
Query: 458 SHENLIGSGSFGSVYKGYLR-----EGISVAVKVLDIESTGTWK-SFFAECEALRNTRHR 511
+ + +IG+G FG VYKG L+ + + VA+K L T + F E + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
N+++L S +K M ++ E++ NG+L ++ E + L+ + + I
Sbjct: 107 NIIRLEGVISK--YKPM---MIITEYMENGALDKFLR-----EKDGEFSVLQLVGMLRGI 156
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A+ + YL N + VH DL NIL++ ++ KV DFGL+R L + + + +T
Sbjct: 157 AAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED---DPEATYTTSGG 210
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFP 690
K I + PE K ++A DV+SFG+++ E+ T G P E EV +K + F
Sbjct: 211 KIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV--MKAINDGFR 268
Query: 691 KNAQQVLDRELRQLMMSSESQ 711
+ QLMM Q
Sbjct: 269 LPTPMDCPSAIYQLMMQCWQQ 289
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 76 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 122
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H +L+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 123 ERNYIHRNLRAANILVSDTLSCKIADFGLAR-LIE----DNEYTAREGAKFPIKWTAPEA 177
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 178 INYGTF---TIKSDVWSFGILLTEIVT 201
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ EFL GSL +++ +H ++ ++ L I ++Y
Sbjct: 81 GVCYSAGRRN---LKLIMEFLPYGSLREYLQ-----KHKERIDHIKLLQYTSQICKGMEY 132
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H DL NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQ---DKEXXKVKEPGESPIFW 186
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 112/248 (45%), Gaps = 37/248 (14%)
Query: 453 ATGNFSHENLIGSGSFGSVYKGYLREGISV-AVKVL-------DIESTGTWKSFFAECEA 504
A +E IG G FG V+KG L + SV A+K L + E ++ F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 505 LRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER 564
+ N H N+VKL + MEF+ GD H R + + + + +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPC----------GDLYH--RLLDKAHPIKWSVK 124
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL---DED--MTAKVGDFGLARSLLERI 619
L + +DIA ++Y+ N PIVH DL+ NI L DE+ + AKV DFGL+
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS------- 176
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTA--GDVYSFGVMLLEIFTGMSPTHESFAG 677
Q S+ S L G+ ++ PE E+ S D YSF ++L I TG P E G
Sbjct: 177 --QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 678 EVSLVKWV 685
++ + +
Sbjct: 235 KIKFINMI 242
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 25/207 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G G V+ GY VAVK L S +F AE ++ +H+ LV+L +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ NGSL D++ K G L + L++A IA + ++
Sbjct: 80 ------EPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 126
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
E +H DL+ NIL+ + ++ K+ DFGLAR L+E + ++ K I + PE
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIE----DAEXTAREGAKFPIKWTAPEA 181
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
YG + DV+SFG++L EI T
Sbjct: 182 INYGTF---TIKSDVWSFGILLTEIVT 205
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 24/222 (10%)
Query: 461 NLIGSGSFGSVYKGYLRE----GISVAVKV--LDIESTGTWKSFFAECEALRNTRHRNLV 514
++G G FGSV +G L++ + VAVK LD S + F +E +++ H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+L+ C + + + ++ F+ G L ++ R + L +DIA
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
++YL N +H DL N +L +DMT V DFGL++ + S + +G
Sbjct: 160 MEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKI---------YSGDYYRQGR 207
Query: 635 IGYIPPEY----GLGEKPSTA-GDVYSFGVMLLEIFT-GMSP 670
I +P ++ L ++ T+ DV++FGV + EI T GM+P
Sbjct: 208 IAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 112/227 (49%), Gaps = 20/227 (8%)
Query: 446 SYDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEA 504
S D+ + + ++ +G G +G VY G + + ++VAVK L E T + F E
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 81
Query: 505 LRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER 564
++ +H NLV+L+ C +L+ +V E++ G+L D++ + E + +
Sbjct: 82 MKEIKHPNLVQLLGVC-TLEPP----FYIVTEYMPYGNLLDYLRECNREE----VTAVVL 132
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
L +A I+SA++YL +H DL N L+ E+ KV DFGL+R + +
Sbjct: 133 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLM-----TGDT 184
Query: 625 ISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ K I + PE S DV++FGV+L EI T GMSP
Sbjct: 185 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 463 IGSGSFGSVYKGYL-----REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + + F E E L++ +H N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C S +N L L+ E+L GSL D++ +H ++ ++ L I ++Y
Sbjct: 79 GVCYSAGRRN---LKLIMEYLPYGSLRDYLQ-----KHKERIDHIKLLQYTSQICKGMEY 130
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L +H +L NIL++ + K+GDFGL + L + ++ + I +
Sbjct: 131 LGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQ---DKEYYKVKEPGESPIFW 184
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE K S A DV+SFGV+L E+FT
Sbjct: 185 YAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 96 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 146
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
YL + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 147 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EXXSVHNKTGAKLPVK 201
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 36/231 (15%)
Query: 463 IGSGSFGSVYKGYL------REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G+FG V+ ++ + VAVK L S + F E E L +H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNG-------LNFLERLNI 567
C+ L +V+E++ +G L ++ HG G L + L +
Sbjct: 86 FGVCT-----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLE----RIGNQS 623
A +A+ + YL + VH DL N L+ + + K+GDFG++R + R+G ++
Sbjct: 141 ASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHE 673
+ I ++PPE L K +T DV+SFGV+L EIFT G P ++
Sbjct: 198 MLP--------IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 240
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 36/231 (15%)
Query: 463 IGSGSFGSVYKGYL------REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G+FG V+ ++ + VAVK L S + F E E L +H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNG-------LNFLERLNI 567
C+ L +V+E++ +G L ++ HG G L + L +
Sbjct: 80 FGVCT-----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLE----RIGNQS 623
A +A+ + YL + VH DL N L+ + + K+GDFG++R + R+G ++
Sbjct: 135 ASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHE 673
+ I ++PPE L K +T DV+SFGV+L EIFT G P ++
Sbjct: 192 MLP--------IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 234
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 36/231 (15%)
Query: 463 IGSGSFGSVYKGYL------REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G+FG V+ ++ + VAVK L S + F E E L +H+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNG-------LNFLERLNI 567
C+ L +V+E++ +G L ++ HG G L + L +
Sbjct: 109 FGVCT-----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLE----RIGNQS 623
A +A+ + YL + VH DL N L+ + + K+GDFG++R + R+G ++
Sbjct: 164 ASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHE 673
+ I ++PPE L K +T DV+SFGV+L EIFT G P ++
Sbjct: 221 MLP--------IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 263
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 22/224 (9%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
N S + ++G+G FG V G L+ + ISVA+K L + T + F E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+++L + + + +V E++ NGSL ++ +H ++ + +
Sbjct: 106 PNIIRLEGVVT-----KSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
IAS + YL ++ VH DL NIL++ ++ KV DFGLAR L + + + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED---DPEAAYTTRG 209
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHE 673
K I + PE K ++A DV+S+G++L E+ + G P E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 111/248 (44%), Gaps = 37/248 (14%)
Query: 453 ATGNFSHENLIGSGSFGSVYKGYLREGISV-AVKVL-------DIESTGTWKSFFAECEA 504
A +E IG G FG V+KG L + SV A+K L + E ++ F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 505 LRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER 564
+ N H N+VKL + MEF+ GD H R + + + + +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPC----------GDLYH--RLLDKAHPIKWSVK 124
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL---DED--MTAKVGDFGLARSLLERI 619
L + +DIA ++Y+ N PIVH DL+ NI L DE+ + AKV DFG +
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS------- 176
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTA--GDVYSFGVMLLEIFTGMSPTHESFAG 677
Q S+ S L G+ ++ PE E+ S D YSF ++L I TG P E G
Sbjct: 177 --QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 678 EVSLVKWV 685
++ + +
Sbjct: 235 KIKFINMI 242
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 116 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 166
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
YL + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 167 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EYYSVHNKTGAKLPVK 221
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 257
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 111/248 (44%), Gaps = 37/248 (14%)
Query: 453 ATGNFSHENLIGSGSFGSVYKGYLREGISV-AVKVL-------DIESTGTWKSFFAECEA 504
A +E IG G FG V+KG L + SV A+K L + E ++ F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 505 LRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER 564
+ N H N+VKL + MEF+ GD H R + + + + +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPC----------GDLYH--RLLDKAHPIKWSVK 124
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL---DED--MTAKVGDFGLARSLLERI 619
L + +DIA ++Y+ N PIVH DL+ NI L DE+ + AKV DF L+
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS------- 176
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTA--GDVYSFGVMLLEIFTGMSPTHESFAG 677
Q S+ S L G+ ++ PE E+ S D YSF ++L I TG P E G
Sbjct: 177 --QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 678 EVSLVKWV 685
++ + +
Sbjct: 235 KIKFINMI 242
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L T + ++F E ++ +H LV+L +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT- 78
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ E++ GSL D++ K++ G + + ++ + IA + Y+
Sbjct: 79 ----REEPIYIITEYMAKGSLLDFL----KSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 130
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
+H DL+ N+L+ E + K+ DFGLAR + + ++ K I + PE
Sbjct: 131 ---YIHRDLRAANVLVSESLMCKIADFGLARVI-----EDNEYTAREGAKFPIKWTAPEA 182
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
+G + DV+SFG++L EI T
Sbjct: 183 INFGCF---TIKSDVWSFGILLYEIVT 206
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 97 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 147
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
YL + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 148 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EYYSVHNKTGAKLPVK 202
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 115 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 165
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
YL + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 166 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EYYSVHNKTGAKLPVK 220
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 256
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 89 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 139
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
YL + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 140 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EYYSVHNKTGAKLPVK 194
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 94 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 144
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
YL + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 145 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EYYSVHNKTGAKLPVK 199
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 235
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 33/298 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGT-WKSFFAECEALRNTRHRNL 513
++ + +IGSG+ V Y + VA+K +++E T E +A+ H N+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI-HGERKNEHGNGLNFLERLNIAI--- 569
V TS F + L LV + L GS+ D I H K EH +G+ L+ IA
Sbjct: 71 VSYYTS-----FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV--LDESTIATILR 123
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
++ L+YLH + ++ H D+K GNILL ED + ++ DFG++ + L G+ +
Sbjct: 124 EVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVS-AFLATGGDITRNKVRK 179
Query: 630 VLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688
G+ ++ PE + D++SFG+ +E+ TG +P H+ +V ++ ++++
Sbjct: 180 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-LQND 238
Query: 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746
P V D+E+ + S + I L C + P R E LR
Sbjct: 239 PPSLETGVQDKEMLKKYGKSFRKMISL--------------CLQKDPEKRPTAAELLR 282
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 98 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 148
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
+L + VH DL N +LDE T KV DFGLAR +L++ S+ + K +
Sbjct: 149 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDK--EFDSVHNKTGAKLPVK 203
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 33/298 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGT-WKSFFAECEALRNTRHRNL 513
++ + +IGSG+ V Y + VA+K +++E T E +A+ H N+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI-HGERKNEHGNGLNFLERLNIAI--- 569
V TS F + L LV + L GS+ D I H K EH +G+ L+ IA
Sbjct: 76 VSYYTS-----FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV--LDESTIATILR 128
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
++ L+YLH + ++ H D+K GNILL ED + ++ DFG++ + L G+ +
Sbjct: 129 EVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVS-AFLATGGDITRNKVRK 184
Query: 630 VLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688
G+ ++ PE + D++SFG+ +E+ TG +P H+ +V ++ ++++
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-LQND 243
Query: 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746
P V D+E+ + S + I L C + P R E LR
Sbjct: 244 PPSLETGVQDKEMLKKYGKSFRKMISL--------------CLQKDPEKRPTAAELLR 287
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 97 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 147
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
YL + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 148 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EYYSVHNKTGAKLPVK 202
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 96 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 146
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
YL + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 147 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EYYSVHNKTGAKLPVK 201
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 95 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 145
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
YL + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 146 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EYYSVHNKTGAKLPVK 200
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 92 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 142
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
YL + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 143 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EYYSVHNKTGAKLPVK 197
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 233
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
E +G+G FG V+ + VAVK + S ++F AE ++ +H LVKL
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAV 78
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
+ E + ++ EF+ GSL D++ K++ G+ + ++ + IA + ++
Sbjct: 79 VTK------EPIYIITEFMAKGSLLDFL----KSDEGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+H DL+ NIL+ + K+ DFGLAR + + ++ K I +
Sbjct: 129 QRN---YIHRDLRAANILVSASLVCKIADFGLARVI-----EDNEYTAREGAKFPIKWTA 180
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE + DV+SFG++L+EI T
Sbjct: 181 PEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 22/224 (9%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
N S + ++G+G FG V G L+ + ISVA+K L + T + F E + H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+++L + + + +V E++ NGSL ++ +H ++ + +
Sbjct: 94 PNIIRLEGVVT-----KSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 143
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
IAS + YL + + VH DL NIL++ ++ KV DFGL+R L + + + +T
Sbjct: 144 IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRG 197
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHE 673
K I + PE K ++A DV+S+G++L E+ + G P E
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 241
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 22/224 (9%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
N S + ++G+G FG V G L+ + ISVA+K L + T + F E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+++L + + + +V E++ NGSL ++ +H ++ + +
Sbjct: 106 PNIIRLEGVVT-----KSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
IAS + YL ++ VH DL NIL++ ++ KV DFGL+R L + + + +T
Sbjct: 156 IASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRG 209
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHE 673
K I + PE K ++A DV+S+G++L E+ + G P E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522
+G+G FG V+ GY VAVK L T + ++F E ++ +H LV+L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT- 77
Query: 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
E + ++ EF+ GSL D++ K++ G + + ++ + IA + Y+
Sbjct: 78 ----KEEPIYIITEFMAKGSLLDFL----KSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 129
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE- 641
+H DL+ N+L+ E + K+ DFGLAR + + ++ K I + PE
Sbjct: 130 ---YIHRDLRAANVLVSESLMCKIADFGLARVI-----EDNEYTAREGAKFPIKWTAPEA 181
Query: 642 --YGLGEKPSTAGDVYSFGVMLLEIFT 666
+G + +V+SFG++L EI T
Sbjct: 182 INFGCF---TIKSNVWSFGILLYEIVT 205
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 22/224 (9%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
N S + ++G+G FG V G L+ + ISVA+K L + T + F E + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+++L + + + +V E++ NGSL ++ +H ++ + +
Sbjct: 77 PNIIRLEGVVT-----KSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 126
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
IAS + YL + + VH DL NIL++ ++ KV DFGL+R L + + + +T
Sbjct: 127 IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRG 180
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHE 673
K I + PE K ++A DV+S+G++L E+ + G P E
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 224
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 24/257 (9%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
N S + ++G+G FG V G L+ + ISVA+K L + T + F E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+++L + + + +V E++ NGSL ++ +H ++ + +
Sbjct: 106 PNIIRLEGVVT-----KSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
IAS + YL ++ VH DL NIL++ ++ KV DFGL+R L + + + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRG 209
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNF 689
K I + PE K ++A DV+S+G++L E+ + G P E +V +K V+ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV--IKAVDEGY 267
Query: 690 PKNAQQVLDRELRQLMM 706
L QLM+
Sbjct: 268 RLPPPMDCPAALYQLML 284
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 24/257 (9%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
N S + ++G+G FG V G L+ + ISVA+K L + T + F E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+++L + + + +V E++ NGSL ++ +H ++ + +
Sbjct: 106 PNIIRLEGVVT-----KSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
IAS + YL ++ VH DL NIL++ ++ KV DFGL+R L + + + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRG 209
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNF 689
K I + PE K ++A DV+S+G++L E+ + G P E +V +K V+ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV--IKAVDEGY 267
Query: 690 PKNAQQVLDRELRQLMM 706
L QLM+
Sbjct: 268 RLPPPMDCPAALYQLML 284
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 24/257 (9%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
N S + ++G+G FG V G L+ + ISVA+K L + T + F E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+++L + + + +V E++ NGSL ++ +H ++ + +
Sbjct: 106 PNIIRLEGVVT-----KSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
IAS + YL ++ VH DL NIL++ ++ KV DFGL+R L + + + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRG 209
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNF 689
K I + PE K ++A DV+S+G++L E+ + G P E +V +K V+ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV--IKAVDEGY 267
Query: 690 PKNAQQVLDRELRQLMM 706
L QLM+
Sbjct: 268 RLPPPMDCPAALYQLML 284
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 22/224 (9%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
N S + ++G+G FG V G L+ + ISVA+K L + T + F E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+++L + + + +V E++ NGSL ++ +H ++ + +
Sbjct: 106 PNIIRLEGVVT-----KSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
IAS + YL ++ VH DL NIL++ ++ KV DFGL+R L + + + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRG 209
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHE 673
K I + PE K ++A DV+S+G++L E+ + G P E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 22/224 (9%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
N S + ++G+G FG V G L+ + ISVA+K L + T + F E + H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+++L + + + +V E++ NGSL ++ +H ++ + +
Sbjct: 104 PNIIRLEGVVT-----KSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 153
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
IAS + YL ++ VH DL NIL++ ++ KV DFGL+R L + + + +T
Sbjct: 154 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRG 207
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHE 673
K I + PE K ++A DV+S+G++L E+ + G P E
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 251
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 463 IGSGSFGSV-YKGYLREGI----SVAVKVLDIESTGTW-KSFFAECEALRNTRHRNLVKL 516
+G G FG V Y EG VAVK L ES G E E LRN H N+VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
C+ D N + L+ EFL +GSL +++ + N +N ++L A+ I +D
Sbjct: 89 KGICTE-DGGNG--IKLIMEFLPSGSLKEYLPKNK-----NKINLKQQLKYAVQICKGMD 140
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
YL + VH DL N+L++ + K+GDFGL +++ ++ + +
Sbjct: 141 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE---TDKEXXTVKDDRDSPVF 194
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
+ PE + K A DV+SFGV L E+ T
Sbjct: 195 WYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 463 IGSGSFGSV-YKGYLREGI----SVAVKVLDIESTGTW-KSFFAECEALRNTRHRNLVKL 516
+G G FG V Y EG VAVK L ES G E E LRN H N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
C+ D N + L+ EFL +GSL +++ + N +N ++L A+ I +D
Sbjct: 77 KGICTE-DGGNG--IKLIMEFLPSGSLKEYLPKNK-----NKINLKQQLKYAVQICKGMD 128
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
YL + VH DL N+L++ + K+GDFGL +++ ++ + +
Sbjct: 129 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE---TDKEXXTVKDDRDSPVF 182
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
+ PE + K A DV+SFGV L E+ T
Sbjct: 183 WYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 24/257 (9%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
N S + ++G+G FG V G L+ + ISVA+K L + T + F E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+++L + + + +V E++ NGSL ++ +H ++ + +
Sbjct: 106 PNIIRLEGVVT-----KSKPVMIVTEYMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
IAS + YL ++ VH DL NIL++ ++ KV DFGL R L + + + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED---DPEAAYTTRG 209
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNF 689
K I + PE K ++A DV+S+G++L E+ + G P E +V +K V+ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV--IKAVDEGY 267
Query: 690 PKNAQQVLDRELRQLMM 706
L QLM+
Sbjct: 268 RLPPPMDCPAALYQLML 284
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
E +G+G FG V+ + VAVK + S ++F AE ++ +H LVKL
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAV 251
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
+ E + ++ EF+ GSL D++ K++ G+ + ++ + IA + ++
Sbjct: 252 VTK------EPIYIITEFMAKGSLLDFL----KSDEGSKQPLPKLIDFSAQIAEGMAFIE 301
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+H DL+ NIL+ + K+ DFGLAR + + ++ K I +
Sbjct: 302 QRN---YIHRDLRAANILVSASLVCKIADFGLARVI-----EDNEYTAREGAKFPIKWTA 353
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFT 666
PE + DV+SFG++L+EI T
Sbjct: 354 PEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 95 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 145
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
+L + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 146 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EFDSVHNKTGAKLPVK 200
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 97 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 147
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
+L + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 148 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EFDSVHNKTGAKLPVK 202
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 98 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 148
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
+L + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 149 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EFDSVHNKTGAKLPVK 203
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 156 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 206
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
+L + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 207 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EFDSVHNKTGAKLPVK 261
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 297
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 97 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 147
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
+L + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 148 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EFDSVHNKTGAKLPVK 202
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 462 LIGSGSFGSVYKGYLREG----ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKL 516
+IG G FG VY G L + I AVK L+ I G F E +++ H N++ L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ C + + +V ++ +G L ++I E N L + + +A +
Sbjct: 102 LGICLRSEGSPL----VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMK 152
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
+L + VH DL N +LDE T KV DFGLAR + ++ S+ + K +
Sbjct: 153 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK--EFDSVHNKTGAKLPVK 207
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ E +K +T DV+SFGV+L E+ T +P +
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 243
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 22/234 (9%)
Query: 445 ISYDELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECE 503
I LR G F L+G+G++G VYKG +++ G A+KV+D+ + E
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEIN 72
Query: 504 ALRN-TRHRNLVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNF 561
L+ + HRN+ + + M+ L LV EF G GS+ D I KN GN L
Sbjct: 73 MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI----KNTKGNTLKE 128
Query: 562 LERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGN 621
I +I L +LH ++H D+K N+LL E+ K+ DFG++ L +G
Sbjct: 129 EWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR 185
Query: 622 QSSISSTHVLKGSIGYIPPEY-GLGEKPSTA----GDVYSFGVMLLEIFTGMSP 670
+++ G+ ++ PE E P D++S G+ +E+ G P
Sbjct: 186 RNTFI------GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 114/276 (41%), Gaps = 30/276 (10%)
Query: 442 PQMISYDELRRATG-----NFSHENLIGSGSFGSVYKGY-LREGISVA---VKVLDIEST 492
PQ LR G NF E IG G F VY+ L +G+ VA V++ D+
Sbjct: 14 PQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDA 73
Query: 493 GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERK 552
E + L+ H N++K S F L +V E G L I +K
Sbjct: 74 KARADCIKEIDLLKQLNHPNVIKYYAS-----FIEDNELNIVLELADAGDLSRMIKHFKK 128
Query: 553 NEHGNGLNFLER--LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610
+ ER + + SAL+++H+ ++H D+KP N+ + K+GD G
Sbjct: 129 QKRL----IPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 181
Query: 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L R S ++ H L G+ Y+ PE + D++S G +L E+ SP
Sbjct: 182 LGRFF------SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
Query: 671 THESFAGEVSLVKWVES-NFPKNAQQVLDRELRQLM 705
+ SL K +E ++P ELRQL+
Sbjct: 236 FYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV 271
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 22/224 (9%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
N S + ++G+G FG V G L+ + ISVA+K L + T + F E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+++L + + + +V E + NGSL ++ +H ++ + +
Sbjct: 106 PNIIRLEGVVT-----KSKPVMIVTEXMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
IAS + YL ++ VH DL NIL++ ++ KV DFGL+R L + + + +T
Sbjct: 156 IASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRG 209
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHE 673
K I + PE K ++A DV+S+G++L E+ + G P E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 22/224 (9%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
N S + ++G+G FG V G L+ + ISVA+K L + T + F E + H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+++L + + + +V E + NGSL ++ +H ++ + +
Sbjct: 77 PNIIRLEGVVT-----KSKPVMIVTEXMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 126
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
IAS + YL + + VH DL NIL++ ++ KV DFGL+R L + + + +T
Sbjct: 127 IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRG 180
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHE 673
K I + PE K ++A DV+S+G++L E+ + G P E
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 224
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 26/213 (12%)
Query: 461 NLIGSGSFGSVYKG-YLREG----ISVAVKVLDIESTGTWK--SFFAECEALRNTRHRNL 513
++GSG+FG+VYKG ++ EG I VA+K+L+ E+TG F E + + H +L
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVEFMDEALIMASMDHPHL 102
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
V+L+ C S + LV + + +G L +++H EH + + LN + IA
Sbjct: 103 VRLLGVCLS------PTIQLVTQLMPHGCLLEYVH-----EHKDNIGSQLLLNWCVQIAK 151
Query: 574 ALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKG 633
+ YL E +VH DL N+L+ K+ DFGLAR LLE G++ ++ K
Sbjct: 152 GMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLAR-LLE--GDEKEYNADGG-KM 204
Query: 634 SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
I ++ E K + DV+S+GV + E+ T
Sbjct: 205 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 26/213 (12%)
Query: 461 NLIGSGSFGSVYKG-YLREG----ISVAVKVLDIESTGTWK--SFFAECEALRNTRHRNL 513
++GSG+FG+VYKG ++ EG I VA+K+L+ E+TG F E + + H +L
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVEFMDEALIMASMDHPHL 79
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
V+L+ C S + LV + + +G L +++H EH + + LN + IA
Sbjct: 80 VRLLGVCLS------PTIQLVTQLMPHGCLLEYVH-----EHKDNIGSQLLLNWCVQIAK 128
Query: 574 ALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKG 633
+ YL E +VH DL N+L+ K+ DFGLAR LLE G++ ++ K
Sbjct: 129 GMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLAR-LLE--GDEKEYNADGG-KM 181
Query: 634 SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
I ++ E K + DV+S+GV + E+ T
Sbjct: 182 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 24/257 (9%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
N S + ++G+G FG V G L+ + ISVA+K L + T + F E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+++L + + + +V E + NGSL ++ +H ++ + +
Sbjct: 106 PNIIRLEGVVT-----KSKPVMIVTEXMENGSLDSFLR-----KHDAQFTVIQLVGMLRG 155
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
IAS + YL ++ VH DL NIL++ ++ KV DFGL+R L + + + +T
Sbjct: 156 IASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRG 209
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNF 689
K I + PE K ++A DV+S+G++L E+ + G P E +V +K V+ +
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV--IKAVDEGY 267
Query: 690 PKNAQQVLDRELRQLMM 706
L QLM+
Sbjct: 268 RLPPPMDCPAALYQLML 284
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
Query: 460 ENLIGSGSFGSVYKG-YLREG---ISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+ +IG G FG VY G Y+ + I A+K L I ++F E +R H N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
LI L + + + L Y + +G L +I ++N L ++ + +A
Sbjct: 86 ALIGIM--LPPEGLPHVLLPY--MCHGDLLQFIRSPQRNPTVKDL-----ISFGLQVARG 136
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
++YL E VH DL N +LDE T KV DFGLAR +L+R S+ +
Sbjct: 137 MEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR--EYYSVQQHRHARLP 191
Query: 635 IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673
+ + E + +T DV+SFGV+L E+ T +P +
Sbjct: 192 VKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR 230
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 455 GNFSHENLIGSGSFGSV-YKGYLREGISVAVKVLDIES--TGTWKSFFAECEALRNTRHR 511
GN+ + IG G+F V ++ G VAVK++D + + F E ++ H
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNGLNFLERLNIAI 569
N+VKL + + L LV E+ G + D++ HG K + F +
Sbjct: 75 NIVKLFEVIET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA-KFRQ------ 122
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I SA+ Y H IVH DLK N+LLD DM K+ DFG + +GN+
Sbjct: 123 -IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFT--VGNK-----LD 171
Query: 630 VLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSP 670
GS Y PE G+K DV+S GV+L + +G P
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 25/228 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGYLREG----ISVAVKVL--DIESTGTWKSFFAECEALRNTR 509
F+ ++G G FGSV + L++ + VAVK+L DI ++ + F E ++
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 510 HRNLVKLI-TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIA 568
H ++ KL+ S S + ++ F+ +G L ++ R E+ L +
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+DIA ++YL + +H DL N +L EDMT V DFGL+R + S
Sbjct: 144 VDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIY---------SGD 191
Query: 629 HVLKGSIGYIPPEY----GLGEKPSTA-GDVYSFGVMLLEIFT-GMSP 670
+ +G +P ++ L + T DV++FGV + EI T G +P
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
E +G+G FG V+ + VAVK + S ++F AE ++ +H LVKL
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAV 245
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
+ E + ++ EF+ GSL D++ K++ G+ + ++ + IA + ++
Sbjct: 246 VTK------EPIYIITEFMAKGSLLDFL----KSDEGSKQPLPKLIDFSAQIAEGMAFIE 295
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+H DL+ NIL+ + K+ DFGLA R+G + I T + G
Sbjct: 296 QRN---YIHRDLRAANILVSASLVCKIADFGLA-----RVGAKFPIKWTAPEAINFGSF- 346
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFT 666
+ DV+SFG++L+EI T
Sbjct: 347 ---------TIKSDVWSFGILLMEIVT 364
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 455 GNFSHENLIGSGSFGSV-YKGYLREGISVAVKVLDIES--TGTWKSFFAECEALRNTRHR 511
GN+ IG G+F V ++ G VAVK++D + + + F E ++ H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNGLNFLERLNIAI 569
N+VKL + + L LV E+ G + D++ HG K + F +
Sbjct: 74 NIVKLFEVIET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA-KFRQ------ 121
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I SA+ Y H IVH DLK N+LLD DM K+ DFG + GN+
Sbjct: 122 -IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNK-----LD 170
Query: 630 VLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSP 670
GS Y PE G+K DV+S GV+L + +G P
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 455 GNFSHENLIGSGSFGSV-YKGYLREGISVAVKVLDIES--TGTWKSFFAECEALRNTRHR 511
GN+ IG G+F V ++ G VAVK++D + + + F E ++ H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNGLNFLERLNIAI 569
N+VKL + + L LV E+ G + D++ HG K + F +
Sbjct: 74 NIVKLFEVIET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA-KFRQ------ 121
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I SA+ Y H IVH DLK N+LLD DM K+ DFG + GN+
Sbjct: 122 -IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNK-----LD 170
Query: 630 VLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSP 670
GS Y PE G+K DV+S GV+L + +G P
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLD---IESTGTWKSFFAECEALR 506
R G++ + +G G+FG V G + G VAVK+L+ I S E + L+
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 507 NTRHRNLVKLITSCSS-LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
RH +++KL S+ DF +V E++ G L D+I +HG + +E
Sbjct: 67 LFRHPHIIKLYQVISTPTDF------FMVMEYVSGGELFDYI-----CKHGR-VEEMEAR 114
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+ I SA+DY H +VH DLKP N+LLD M AK+ DFGL+ + +
Sbjct: 115 RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLS----------NMM 161
Query: 626 SSTHVLKGSIG---YIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSP 670
S L+ S G Y PE G D++S GV+L + G P
Sbjct: 162 SDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLD---IESTGTWKSFFAECEALR 506
R G++ + +G G+FG V G + G VAVK+L+ I S E + L+
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 507 NTRHRNLVKLITSCSS-LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL 565
RH +++KL S+ DF +V E++ G L D+I +HG + +E
Sbjct: 67 LFRHPHIIKLYQVISTPTDF------FMVMEYVSGGELFDYI-----CKHGR-VEEMEAR 114
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+ I SA+DY H +VH DLKP N+LLD M AK+ DFGL+ + +
Sbjct: 115 RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLS----------NMM 161
Query: 626 SSTHVLKGSIG---YIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSP 670
S L+ S G Y PE G D++S GV+L + G P
Sbjct: 162 SDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 129/277 (46%), Gaps = 33/277 (11%)
Query: 446 SYDELRRATGNFSHE---------NLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST 492
+Y++ RA F+ E +IG+G FG V G L+ ++VA+K L + T
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 493 -GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER 551
+ F E + H N+V L + + + +V EF+ NG+L ++
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVT-----RGKPVMIVIEFMENGALDAFL---- 135
Query: 552 KNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611
+H ++ + + IA+ + YL ++ VH DL NIL++ ++ KV DFGL
Sbjct: 136 -RKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGL 191
Query: 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+R + + + ++ +T K + + PE K ++A DV+S+G+++ E+ + G P
Sbjct: 192 SRVIED---DPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
Query: 671 THESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMS 707
+ +V +K +E + A L QLM+
Sbjct: 249 YWDMSNQDV--IKAIEEGYRLPAPMDCPAGLHQLMLD 283
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 17/238 (7%)
Query: 462 LIGSGSFGSVYKGY-LREGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLI 517
++G G V+ LR+ VAVKVL + + F E + H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + + +V E++ +L D +H E + + + D AL++
Sbjct: 79 DTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTE------GPMTPKRAIEVIADACQALNF 131
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
H + I+H D+KP NI++ KV DFG+AR++ + GN S++ T + G+ Y
Sbjct: 132 SHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS-GN--SVTQTAAVIGTAQY 185
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQ 695
+ PE G+ DVYS G +L E+ TG P V+ E P +A+
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARH 243
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 455 GNFSHENLIGSGSFGSV-YKGYLREGISVAVKVLDIES--TGTWKSFFAECEALRNTRHR 511
GN+ IG G+F V ++ G VAVK++D + + + F E ++ H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNGLNFLERLNIAI 569
N+VKL + + L LV E+ G + D++ HG K + F +
Sbjct: 74 NIVKLFEVIET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA-KFRQ------ 121
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I SA+ Y H IVH DLK N+LLD DM K+ DFG + GN+
Sbjct: 122 -IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNK-----LD 170
Query: 630 VLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y PE G+K DV+S GV+L + +G P
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 455 GNFSHENLIGSGSFGSV-YKGYLREGISVAVKVLDIES--TGTWKSFFAECEALRNTRHR 511
GN+ IG G+F V ++ G VAV+++D + + + F E ++ H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNGLNFLERLNIAI 569
N+VKL + + L LV E+ G + D++ HG K + F +
Sbjct: 74 NIVKLFEVIET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA-KFRQ------ 121
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I SA+ Y H IVH DLK N+LLD DM K+ DFG + GN+
Sbjct: 122 -IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNK-----LD 170
Query: 630 VLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSP 670
GS Y PE G+K DV+S GV+L + +G P
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 455 GNFSHENLIGSGSFGSV-YKGYLREGISVAVKVLDIES--TGTWKSFFAECEALRNTRHR 511
GN+ IG G+F V ++ G VAVK++D + + + F E ++ H
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNGLNFLERLNIAI 569
N+VKL + + L LV E+ G + D++ HG K + F +
Sbjct: 67 NIVKLFEVIET-----EKTLYLVMEYASGGEVFDYLVAHGWMKEKEARA-KFRQ------ 114
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I SA+ Y H IVH DLK N+LLD DM K+ DFG + GN+
Sbjct: 115 -IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNK-----LD 163
Query: 630 VLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSP 670
GS Y PE G+K DV+S GV+L + +G P
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 41/283 (14%)
Query: 453 ATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIEST-GTWKSFFAECEALRNTRH 510
++ F +G+G++ +VYKG + G+ VA+K + ++S GT + E ++ +H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+V+L + + L LV+EF+ N L ++ GL
Sbjct: 63 ENIVRLYDVIHTENK-----LTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
+ L + H E I+H DLKP N+L+++ K+GDFGLAR+ G + S+ V
Sbjct: 117 LLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF----GIPVNTFSSEV 169
Query: 631 LKGSIGYIPPEYGLGEKP-STAGDVYSFGVMLLEIFTG-------------------MSP 670
+ ++ Y P+ +G + ST+ D++S G +L E+ TG M
Sbjct: 170 V--TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGT 227
Query: 671 THESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTI 713
+ES V+ + + N QQ R+LRQ++ + +
Sbjct: 228 PNESLWPSVTKL----PKYNPNIQQRPPRDLRQVLQPHTKEPL 266
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 457 FSHENL-----IGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKS-FFAECEALRNTR 509
+HE+L IG G+FG V+ G LR + VAVK K+ F E L+
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
H N+V+LI C+ + + +V E + G ++ E G L L +
Sbjct: 171 HPNIVRLIGVCT-----QKQPIYIVMELVQGGDFLTFLRTE-----GARLRVKTLLQMVG 220
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
D A+ ++YL + C +H DL N L+ E K+ DFG++R + + +S
Sbjct: 221 DAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV----XAASGG 273
Query: 630 VLKGSIGYIPPE---YGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ + + + PE YG + S+ DV+SFG++L E F+ G SP
Sbjct: 274 LRQVPVKWTAPEALNYG---RYSSESDVWSFGILLWETFSLGASP 315
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 17/238 (7%)
Query: 462 LIGSGSFGSVYKGY-LREGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLI 517
++G G V+ LR+ VAVKVL + + F E + H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + + +V E++ +L D +H E + + + D AL++
Sbjct: 79 DTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTE------GPMTPKRAIEVIADACQALNF 131
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
H + I+H D+KP NI++ KV DFG+AR++ + GN S++ T + G+ Y
Sbjct: 132 SHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS-GN--SVTQTAAVIGTAQY 185
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQ 695
+ PE G+ DVYS G +L E+ TG P V+ E P +A+
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH 243
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 102/234 (43%), Gaps = 35/234 (14%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVL---------DIESTGTWKSF 498
+++ +F ++G GSFG V+ + + A+K L D+E T K
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 499 FAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNG 558
+ H L + + F+ E L V E+L G L I K +
Sbjct: 72 LSLA-----WEHPFLTHMFCT-----FQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRA 121
Query: 559 LNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618
+ A +I L +LH+ IV+ DLK NILLD+D K+ DFG+ +
Sbjct: 122 TFY------AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE---- 168
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
N + T+ G+ YI PE LG+K + + D +SFGV+L E+ G SP H
Sbjct: 169 --NMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 102/234 (43%), Gaps = 35/234 (14%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVL---------DIESTGTWKSF 498
+++ +F ++G GSFG V+ + + A+K L D+E T K
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 499 FAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNG 558
+ H L + + F+ E L V E+L G L I K +
Sbjct: 71 LSLA-----WEHPFLTHMFCT-----FQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRA 120
Query: 559 LNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618
+ A +I L +LH+ IV+ DLK NILLD+D K+ DFG+ +
Sbjct: 121 TFY------AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE---- 167
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
N + T+ G+ YI PE LG+K + + D +SFGV+L E+ G SP H
Sbjct: 168 --NMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 219
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 17/238 (7%)
Query: 462 LIGSGSFGSVYKGY-LREGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLI 517
++G G V+ LR+ VAVKVL + + F E + H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + + +V E++ +L D +H E + + + D AL++
Sbjct: 79 DTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTE------GPMTPKRAIEVIADACQALNF 131
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
H + I+H D+KP NIL+ KV DFG+AR++ + GN S+ T + G+ Y
Sbjct: 132 SHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADS-GN--SVXQTAAVIGTAQY 185
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQ 695
+ PE G+ DVYS G +L E+ TG P V+ E P +A+
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH 243
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 35/227 (15%)
Query: 457 FSHENL-----IGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKS-FFAECEALRNTR 509
+HE+L IG G+FG V+ G LR + VAVK K+ F E L+
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS 170
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
H N+V+LI C+ + + +V E + G ++ E G L L +
Sbjct: 171 HPNIVRLIGVCT-----QKQPIYIVMELVQGGDFLTFLRTE-----GARLRVKTLLQMVG 220
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
D A+ ++YL + C +H DL N L+ E K+ DFG++R +
Sbjct: 221 DAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR---------EEADGVY 268
Query: 630 VLKGSIGYIPPEYGLGE-----KPSTAGDVYSFGVMLLEIFT-GMSP 670
G + +P ++ E + S+ DV+SFG++L E F+ G SP
Sbjct: 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 455 GNFSHENLIGSGSFGSV-YKGYLREGISVAVKVLDIES--TGTWKSFFAECEALRNTRHR 511
GN+ IG G+F V ++ G VAV+++D + + + F E ++ H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNGLNFLERLNIAI 569
N+VKL + + L LV E+ G + D++ HG K + F +
Sbjct: 74 NIVKLFEVIET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA-KFRQ------ 121
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I SA+ Y H IVH DLK N+LLD DM K+ DFG + GN+
Sbjct: 122 -IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNK-----LD 170
Query: 630 VLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSP 670
GS Y PE G+K DV+S GV+L + +G P
Sbjct: 171 EFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 27/262 (10%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY R+ +A+KVL +E G E E + RH N+++L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + L+ E+ G++ + + + ++ ++A+AL Y
Sbjct: 80 Y-----FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYI------TELANALSYC 128
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H D+KP N+LL + K+ DFG + + SS +T L G++ Y+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS------VHAPSSRRTT--LCGTLDYL 177
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH-ESFAGEVSLVKWVESNFPKNAQQVL 697
PPE G D++S GV+ E GM P ++ + VE FP +
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA 237
Query: 698 DRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ + L + L
Sbjct: 238 RDLISRLLKHNASQRLTLAEVL 259
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 33/229 (14%)
Query: 463 IGSGSFGSVY--------KGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNT-RHRN 512
+G G+FG V K +E ++VAVK+L ++T +E E ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLN--------FL 562
++ L+ +C+ L ++ E+ G+L +++ R E+ +N F
Sbjct: 103 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++ +A ++YL + +H DL N+L+ E+ K+ DFGLAR I N
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD----INNI 210
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
T + + ++ PE + DV+SFGV++ EIFT G SP
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 110/238 (46%), Gaps = 26/238 (10%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
+G G+FG VYK +E + A KV+D +S + + E + L + H N+VKL+ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
F L ++ EF G++ D + E + L + + AL+YLH++
Sbjct: 103 ---FYYENNLWILIEFCAGGAV-DAVMLELER----PLTESQIQVVCKQTLDALNYLHDN 154
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
I+H DLK GNIL D K+ DFG++ N +I G+ ++ PE
Sbjct: 155 ---KIIHRDLKAGNILFTLDGDIKLADFGVSAK------NTRTIQRRDSFIGTPYWMAPE 205
Query: 642 YGLGE----KP-STAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQ 694
+ E +P DV+S G+ L+E+ P HE V L+K +S P AQ
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV-LLKIAKSEPPTLAQ 262
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 43/312 (13%)
Query: 446 SYDELRRATGNFSHE---------NLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST 492
+Y+E RA +F+ E +IGSG G V G LR + VA+K L T
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 493 GTWK-SFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER 551
+ F +E + H N+++L + +V E++ NGSL ++
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVT-----RGRLAMIVTEYMENGSLDTFL---- 141
Query: 552 KNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611
H ++ + + + + + YL ++ VH DL N+L+D ++ KV DFGL
Sbjct: 142 -RTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+R L + + + +T K I + PE S+A DV+SFGV++ E+ G P
Sbjct: 198 SRVLED---DPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
Query: 671 THESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSE----------SQTIQLHDCLI 720
+V + VE + A L QLM+ SQ + + D LI
Sbjct: 255 YWNMTNRDV--ISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
Query: 721 TIIESVGLSCTT 732
ES+ + T
Sbjct: 313 RSPESLRATATV 324
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 27/215 (12%)
Query: 460 ENLIGSGSFGSVYKGYLR----EGISVAVKVLDIESTGTWK-SFFAECEALRNTRHRNLV 514
E +IG G FG V G L+ I VA+K L T + F +E + H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 515 KL---ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
L +T C + ++ E++ NGSL ++ RKN+ ++ + + I
Sbjct: 94 HLEGVVTKCKPV--------MIITEYMENGSLDAFL---RKND--GRFTVIQLVGMLRGI 140
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
S + YL + + VH DL NIL++ ++ KV DFG++R L + + + +T
Sbjct: 141 GSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED---DPEAAYTTRGG 194
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
K I + PE K ++A DV+S+G+++ E+ +
Sbjct: 195 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
IG GS G V + G VAVK +D+ + F E +R+ H N+V + +S
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS-- 110
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
+ + L +V EFL G+L D + R NE + + + AL YLHN
Sbjct: 111 ---YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------TVCLSVLRALSYLHNQ 160
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
++H D+K +ILL D K+ DFG + + + + L G+ ++ PE
Sbjct: 161 G---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKX------LVGTPYWMAPE 211
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
T D++S G+M++E+ G P
Sbjct: 212 VISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 27/215 (12%)
Query: 460 ENLIGSGSFGSVYKGYLR----EGISVAVKVLDIESTGTWK-SFFAECEALRNTRHRNLV 514
E +IG G FG V G L+ I VA+K L T + F +E + H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 515 KL---ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
L +T C + ++ E++ NGSL ++ RKN+ ++ + + I
Sbjct: 79 HLEGVVTKCKPV--------MIITEYMENGSLDAFL---RKND--GRFTVIQLVGMLRGI 125
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
S + YL + + VH DL NIL++ ++ KV DFG++R L + + + +T
Sbjct: 126 GSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED---DPEAAYTTRGG 179
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
K I + PE K ++A DV+S+G+++ E+ +
Sbjct: 180 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 27/215 (12%)
Query: 460 ENLIGSGSFGSVYKGYLR----EGISVAVKVLDIESTGTWK-SFFAECEALRNTRHRNLV 514
E +IG G FG V G L+ I VA+K L T + F +E + H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 515 KL---ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
L +T C + ++ E++ NGSL ++ RKN+ ++ + + I
Sbjct: 73 HLEGVVTKCKPV--------MIITEYMENGSLDAFL---RKND--GRFTVIQLVGMLRGI 119
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
S + YL + + VH DL NIL++ ++ KV DFG++R L + + + +T
Sbjct: 120 GSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED---DPEAAYTTRGG 173
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
K I + PE K ++A DV+S+G+++ E+ +
Sbjct: 174 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 26/238 (10%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
+G G+FG VYK +E + A KV+D +S + + E + L + H N+VKL+ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
F L ++ EF G++ D + E + L + + AL+YLH++
Sbjct: 103 ---FYYENNLWILIEFCAGGAV-DAVMLELER----PLTESQIQVVCKQTLDALNYLHDN 154
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
I+H DLK GNIL D K+ DFG++ N I G+ ++ PE
Sbjct: 155 ---KIIHRDLKAGNILFTLDGDIKLADFGVSAK------NTRXIQRRDXFIGTPYWMAPE 205
Query: 642 YGLGE----KP-STAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQ 694
+ E +P DV+S G+ L+E+ P HE V L+K +S P AQ
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV-LLKIAKSEPPTLAQ 262
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTR 509
+R +F LIGSG FG V+K R +G + +K + + + E +AL
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLD 62
Query: 510 HRNLVKLITSCSSLDFK-----------NMEFLALVYEFLGNGSLGDWIHGERKNEHGNG 558
H N+V D+ + L + EF G+L WI R G
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR----GEK 118
Query: 559 LNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618
L+ + L + I +DY+H+ +++ DLKP NI L + K+GDFGL SL
Sbjct: 119 LDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
S KG++ Y+ PE + D+Y+ G++L E+
Sbjct: 176 GKRXRS-------KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 43/312 (13%)
Query: 446 SYDELRRATGNFSHE---------NLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST 492
+Y+E RA +F+ E +IGSG G V G LR + VA+K L T
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 493 GTWK-SFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER 551
+ F +E + H N+++L + +V E++ NGSL ++
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVT-----RGRLAMIVTEYMENGSLDTFL---- 141
Query: 552 KNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611
H ++ + + + + + YL ++ VH DL N+L+D ++ KV DFGL
Sbjct: 142 -RTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+R L + + + +T K I + PE S+A DV+SFGV++ E+ G P
Sbjct: 198 SRVLED---DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
Query: 671 THESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSE----------SQTIQLHDCLI 720
+V + VE + A L QLM+ SQ + + D LI
Sbjct: 255 YWNMTNRDV--ISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
Query: 721 TIIESVGLSCTT 732
ES+ + T
Sbjct: 313 RSPESLRATATV 324
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 33/229 (14%)
Query: 463 IGSGSFGSVY--------KGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNT-RHRN 512
+G G+FG V K +E ++VAVK+L ++T +E E ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLN--------FL 562
++ L+ +C+ L ++ E+ G+L +++ R E+ +N F
Sbjct: 103 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++ +A ++YL + +H DL N+L+ E+ K+ DFGLAR I N
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD----INNI 210
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+T + + ++ PE + DV+SFGV++ EIFT G SP
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 27/262 (10%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY R+ +A+KVL +E G E E + RH N+++L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + L+ E+ G++ + + + ++ ++A+AL Y
Sbjct: 80 Y-----FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYI------TELANALSYC 128
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H D+KP N+LL + K+ DFG + + SS T L G++ Y+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS------VHAPSSRRDT--LCGTLDYL 177
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH-ESFAGEVSLVKWVESNFPKNAQQVL 697
PPE G D++S GV+ E GM P ++ + VE FP +
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA 237
Query: 698 DRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ + L + L
Sbjct: 238 RDLISRLLKHNASQRLTLAEVL 259
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 33/229 (14%)
Query: 463 IGSGSFGSVY--------KGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNT-RHRN 512
+G G+FG V K +E ++VAVK+L ++T +E E ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLN--------FL 562
++ L+ +C+ L ++ E+ G+L +++ R E+ +N F
Sbjct: 103 IITLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++ +A ++YL + +H DL N+L+ E+ K+ DFGLAR I N
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD----INNI 210
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
T + + ++ PE + DV+SFGV++ EIFT G SP
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 33/229 (14%)
Query: 463 IGSGSFGSVY--------KGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNT-RHRN 512
+G G+FG V K +E ++VAVK+L ++T +E E ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLN--------FL 562
++ L+ +C+ L ++ E+ G+L +++ R E+ +N F
Sbjct: 103 IIHLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++ +A ++YL + +H DL N+L+ E+ K+ DFGLAR I N
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD----INNI 210
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
T + + ++ PE + DV+SFGV++ EIFT G SP
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 29/217 (13%)
Query: 460 ENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLV 514
E +IG+G FG V G+L+ I VA+K L T + F +E + H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 515 KL---ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
L +T + + ++ EF+ NGSL ++ R+N+ ++ + + I
Sbjct: 98 HLEGVVTKSTPV--------MIITEFMENGSLDSFL---RQND--GQFTVIQLVGMLRGI 144
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A+ + YL ++ VH DL NIL++ ++ KV DFGL+R L + + S + T L
Sbjct: 145 AAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED---DTSDPTYTSAL 198
Query: 632 KGSIG--YIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
G I + PE K ++A DV+S+G+++ E+ +
Sbjct: 199 GGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 22/215 (10%)
Query: 459 HENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
H ++G G FG K RE G + +K L T ++F E + +R H N++K I
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ +K+ L + E++ G+L I + + +R++ A DIAS + Y
Sbjct: 74 ----GVLYKDKR-LNFITEYIKGGTLRGII-----KSMDSQYPWSQRVSFAKDIASGMAY 123
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISS--------TH 629
LH+ + I+H DL N L+ E+ V DFGLAR +++ + S +
Sbjct: 124 LHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ G+ ++ PE G DV+SFG++L EI
Sbjct: 181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 463 IGSGSFGSVY--------KGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNT-RHRN 512
+G G FG V K +E ++VAVK+L ++T +E E ++ +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLN--------FL 562
++ L+ +C+ L ++ E+ G+L +++ R E+ +N F
Sbjct: 149 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++ +A ++YL + +H DL N+L+ E+ K+ DFGLAR I N
Sbjct: 204 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD----INNI 256
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
T + + ++ PE + DV+SFGV++ EIFT G SP
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 17/238 (7%)
Query: 462 LIGSGSFGSVYKGY-LREGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLI 517
++G G V+ LR VAVKVL + + F E + H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA-V 77
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + +V E++ +L D +H E + + + D AL++
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE------GPMTPKRAIEVIADACQALNF 131
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
H + I+H D+KP NI++ KV DFG+AR++ + GN S++ T + G+ Y
Sbjct: 132 SHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS-GN--SVTQTAAVIGTAQY 185
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQ 695
+ PE G+ DVYS G +L E+ TG P V+ E P +A+
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH 243
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 40/231 (17%)
Query: 456 NFSHENLIGSGSFGSVYKGYLREG---ISVAVKVL-DIESTGTWKSFFAECEAL-RNTRH 510
+ +++IG G+FG V K +++ + A+K + + S + F E E L + H
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 75
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGLN 560
N++ L+ +C ++ +L L E+ +G+L D++ R N + L+
Sbjct: 76 PNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 561 FLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIG 620
+ L+ A D+A +DYL + +H DL NIL+ E+ AK+ DFGL+R G
Sbjct: 131 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------G 181
Query: 621 NQSSISSTHVLKGSIGYIPPEYGLGEK-----PSTAGDVYSFGVMLLEIFT 666
+ + K ++G +P + E +T DV+S+GV+L EI +
Sbjct: 182 QEVYV------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 109/238 (45%), Gaps = 26/238 (10%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
+G G+FG VYK +E + A KV+D +S + + E + L + H N+VKL+ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
F L ++ EF G++ D + E + L + + AL+YLH++
Sbjct: 103 ---FYYENNLWILIEFCAGGAV-DAVMLELER----PLTESQIQVVCKQTLDALNYLHDN 154
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
I+H DLK GNIL D K+ DFG++ N I G+ ++ PE
Sbjct: 155 ---KIIHRDLKAGNILFTLDGDIKLADFGVSAK------NTRXIQRRDSFIGTPYWMAPE 205
Query: 642 YGLGE----KP-STAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQ 694
+ E +P DV+S G+ L+E+ P HE V L+K +S P AQ
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV-LLKIAKSEPPTLAQ 262
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 33/229 (14%)
Query: 463 IGSGSFGSVY--------KGYLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRN 512
+G G+FG V K +E ++VAVK+L ++T +E E ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLN--------FL 562
++ L+ +C+ L ++ E+ G+L +++ R E+ +N F
Sbjct: 103 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++ +A ++YL + +H DL N+L+ E+ K+ DFGLAR I N
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD----INNI 210
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
T + + ++ PE + DV+SFGV++ EIFT G SP
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLK 592
+V E++ +L D +H E + + + D AL++ H + I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTE------GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVK 143
Query: 593 PGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG 652
P NI++ KV DFG+AR++ + GN S++ T + G+ Y+ PE G+
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADS-GN--SVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 653 DVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQ 695
DVYS G +L E+ TG P V+ E P +A+
Sbjct: 201 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH 243
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 40/231 (17%)
Query: 456 NFSHENLIGSGSFGSVYKGYLREG---ISVAVKVL-DIESTGTWKSFFAECEAL-RNTRH 510
+ +++IG G+FG V K +++ + A+K + + S + F E E L + H
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 85
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGLN 560
N++ L+ +C ++ +L L E+ +G+L D++ R N + L+
Sbjct: 86 PNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 561 FLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIG 620
+ L+ A D+A +DYL + +H DL NIL+ E+ AK+ DFGL+R G
Sbjct: 141 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------G 191
Query: 621 NQSSISSTHVLKGSIGYIPPEYGLGEK-----PSTAGDVYSFGVMLLEIFT 666
+ + K ++G +P + E +T DV+S+GV+L EI +
Sbjct: 192 QEVYV------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 463 IGSGSFGSVY--------KGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNT-RHRN 512
+G G FG V K +E ++VAVK+L ++T +E E ++ +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLN--------FL 562
++ L+ +C+ L ++ E+ G+L +++ R E+ +N F
Sbjct: 90 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++ +A ++YL + +H DL N+L+ E+ K+ DFGLAR I N
Sbjct: 145 DLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARD----INNI 197
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
T + + ++ PE + DV+SFGV++ EIFT G SP
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 455 GNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRH 510
GN+ +G GSFG V Y G VA+K+++ + + E LR RH
Sbjct: 14 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 73
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+++KL S D + +V E+ GN L D+I K F ++
Sbjct: 74 PHIIKLYDVIKSKDE-----IIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ------ 121
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I SA++Y H IVH DLKP N+LLDE + K+ DFGL+ + + GN S
Sbjct: 122 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSC--- 173
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSP 670
GS Y PE G+ DV+S GV+L + P
Sbjct: 174 --GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 455 GNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRH 510
GN+ +G GSFG V Y G VA+K+++ + + E LR RH
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+++KL S D + +V E+ GN L D+I K F ++
Sbjct: 64 PHIIKLYDVIKSKDE-----IIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ------ 111
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I SA++Y H IVH DLKP N+LLDE + K+ DFGL+ + + GN S
Sbjct: 112 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSC--- 163
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSP 670
GS Y PE G+ DV+S GV+L + P
Sbjct: 164 --GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 23/214 (10%)
Query: 460 ENLIGSGSFGSVYKGYLR----EGISVAVKVLDIESTGTWK-SFFAECEALRNTRHRNLV 514
E +IG+G FG V +G L+ + VA+K L T + F +E + H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+L + N + ++ EF+ NG+L ++ R N+ ++ + + IAS
Sbjct: 81 RLEGVVT-----NSMPVMILTEFMENGALDSFL---RLND--GQFTVIQLVGMLRGIASG 130
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
+ YL E+ VH DL NIL++ ++ KV DFGL+R L E N S + T L G
Sbjct: 131 MRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE---NSSDPTETSSLGGK 184
Query: 635 IG--YIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
I + PE K ++A D +S+G+++ E+ +
Sbjct: 185 IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 463 IGSGSFGSVY--------KGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNT-RHRN 512
+G G FG V K +E ++VAVK+L ++T +E E ++ +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLN--------FL 562
++ L+ +C+ L ++ E+ G+L +++ R E+ +N F
Sbjct: 95 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++ +A ++YL + +H DL N+L+ E+ K+ DFGLAR I N
Sbjct: 150 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD----INNI 202
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
T + + ++ PE + DV+SFGV++ EIFT G SP
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 455 GNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRH 510
GN+ +G GSFG V Y G VA+K+++ + + E LR RH
Sbjct: 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 72
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+++KL S D + +V E+ GN L D+I K F ++
Sbjct: 73 PHIIKLYDVIKSKDE-----IIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ------ 120
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I SA++Y H IVH DLKP N+LLDE + K+ DFGL+ + + GN S
Sbjct: 121 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSC--- 172
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSP 670
GS Y PE G+ DV+S GV+L + P
Sbjct: 173 --GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLK 592
+V E++ +L D +H E + + + D AL++ H + I+H D+K
Sbjct: 110 IVMEYVDGVTLRDIVHTE------GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVK 160
Query: 593 PGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG 652
P NI++ KV DFG+AR++ + GN S++ T + G+ Y+ PE G+
Sbjct: 161 PANIMISATNAVKVMDFGIARAIADS-GN--SVTQTAAVIGTAQYLSPEQARGDSVDARS 217
Query: 653 DVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQ 695
DVYS G +L E+ TG P V+ E P +A+
Sbjct: 218 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH 260
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 463 IGSGSFGSVY--------KGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNT-RHRN 512
+G G FG V K +E ++VAVK+L ++T +E E ++ +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLN--------FL 562
++ L+ +C+ L ++ E+ G+L +++ R E+ +N F
Sbjct: 92 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++ +A ++YL + +H DL N+L+ E+ K+ DFGLAR I N
Sbjct: 147 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD----INNI 199
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
T + + ++ PE + DV+SFGV++ EIFT G SP
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 50/249 (20%)
Query: 456 NFSHENLIGSGSFGSVYKGY------LREGISVAVKVLDIESTGTWKSFFA-ECEALRNT 508
N + IG G+FG V++ VAVK+L E++ ++ F E +
Sbjct: 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 107
Query: 509 RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI-----HGERKNEHGN------ 557
+ N+VKL+ C+ + + L++E++ G L +++ H H +
Sbjct: 108 DNPNIVKLLGVCAV-----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 558 -------GLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610
L+ E+L IA +A+ + YL E VH DL N L+ E+M K+ DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFG 219
Query: 611 LARSLLERIGNQSSISSTHVLKGS------IGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
L+R +I S K I ++PPE + +T DV+++GV+L EI
Sbjct: 220 LSR----------NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
Query: 665 FT-GMSPTH 672
F+ G+ P +
Sbjct: 270 FSYGLQPYY 278
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 463 IGSGSFGSVY--------KGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNT-RHRN 512
+G G+FG V K +E ++VAVK+L ++T +E E ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLN--------FL 562
++ L+ +C+ L ++ E+ G+L +++ R E +N F
Sbjct: 103 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++ +A ++YL + +H DL N+L+ E+ K+ DFGLAR I N
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD----INNI 210
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
T + + ++ PE + DV+SFGV++ EIFT G SP
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 33/229 (14%)
Query: 463 IGSGSFGSVY--------KGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNT-RHRN 512
+G G+FG V K +E ++VAVK+L ++T +E E ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLN--------FL 562
++ L+ +C+ L ++ E+ G+L +++ R E+ +N F
Sbjct: 103 IINLLGACTQDGP-----LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++ +A ++YL + +H DL N+L+ E+ ++ DFGLAR I N
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARD----INNI 210
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
T + + ++ PE + DV+SFGV++ EIFT G SP
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 455 GNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRH 510
GN+ +G GSFG V Y G VA+K+++ + + E LR RH
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+++KL S D + +V E+ GN L D+I K F ++
Sbjct: 68 PHIIKLYDVIKSKDE-----IIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQ------ 115
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I SA++Y H IVH DLKP N+LLDE + K+ DFGL+ + + GN S
Sbjct: 116 IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSC--- 167
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSP 670
GS Y PE G+ DV+S GV+L + P
Sbjct: 168 --GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 455 GNFSHENLIGSGSFGSV-YKGYLREGISVAVKVLDIESTG--TWKSFFAECEALRNTRHR 511
GN+ IG G+F V ++ G VA+K++D + + F E ++ H
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNGLNFLERLNIAI 569
N+VKL + + L L+ E+ G + D++ HG K + F +
Sbjct: 72 NIVKLFEVIET-----EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS-KFRQ------ 119
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST- 628
I SA+ Y H IVH DLK N+LLD DM K+ DFG + N+ ++
Sbjct: 120 -IVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFS--------NEFTVGGKL 167
Query: 629 HVLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSP 670
GS Y PE G+K DV+S GV+L + +G P
Sbjct: 168 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 446 SYDELRRATGNFSHENLIGSGSFGSV-YKGYLREGISVAVKVLDIESTGT-WKSFFAECE 503
YDEL + + IG+G F V ++ G VA+K++D + G+ E E
Sbjct: 4 DYDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIE 60
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI-HGERKNEHGNGLNFL 562
AL+N RH+++ +L L+ N F+ L E+ G L D+I +R +E + F
Sbjct: 61 ALKNLRHQHICQLY---HVLETANKIFMVL--EYCPGGELFDYIISQDRLSEEETRVVFR 115
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ I SA+ Y+H+ H DLKP N+L DE K+ DFGL + GN+
Sbjct: 116 Q-------IVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCA---KPKGNK 162
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKP-STAGDVYSFGVMLLEIFTGMSP 670
T GS+ Y PE G+ + DV+S G++L + G P
Sbjct: 163 DYHLQTCC--GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 23/214 (10%)
Query: 460 ENLIGSGSFGSVYKGYLR----EGISVAVKVLDIESTGTWK-SFFAECEALRNTRHRNLV 514
E +IG+G FG V +G L+ + VA+K L T + F +E + H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+L + N + ++ EF+ NG+L ++ R N+ ++ + + IAS
Sbjct: 79 RLEGVVT-----NSMPVMILTEFMENGALDSFL---RLND--GQFTVIQLVGMLRGIASG 128
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
+ YL E+ VH DL NIL++ ++ KV DFGL+R L E N S + T L G
Sbjct: 129 MRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE---NSSDPTYTSSLGGK 182
Query: 635 IG--YIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
I + PE K ++A D +S+G+++ E+ +
Sbjct: 183 IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ +A+KVL +E G E E + RH N++++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + + L+ EF G L + + + F+E ++A AL Y
Sbjct: 83 Y-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYC 131
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL---ARSLLERIGNQSSISSTHVLKGSI 635
H E ++H D+KP N+L+ K+ DFG A SL R + G++
Sbjct: 132 H---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR-----------XMCGTL 177
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
Y+PPE G+ D++ GV+ E GM P
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ +A+KVL +E G E E + RH N++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + + L+ EF G L + + + F+E ++A AL Y
Sbjct: 82 Y-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYC 130
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL---ARSLLERIGNQSSISSTHVLKGSI 635
H E ++H D+KP N+L+ K+ DFG A SL R + G++
Sbjct: 131 H---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR-----------XMCGTL 176
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
Y+PPE G+ D++ GV+ E GM P
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 455 GNFSHENLIGSGSFGSV-YKGYLREGISVAVKVLDIESTG--TWKSFFAECEALRNTRHR 511
GN+ IG G+F V ++ G VA+K++D + + F E ++ H
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNGLNFLERLNIAI 569
N+VKL + + L L+ E+ G + D++ HG K + F +
Sbjct: 75 NIVKLFEVIET-----EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS-KFRQ------ 122
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST- 628
I SA+ Y H IVH DLK N+LLD DM K+ DFG + N+ ++
Sbjct: 123 -IVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFS--------NEFTVGGKL 170
Query: 629 HVLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y PE G+K DV+S GV+L + +G P
Sbjct: 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 96/222 (43%), Gaps = 29/222 (13%)
Query: 455 GNFSHENLIGSGSFGSV-YKGYLREGISVAVKVLDIES--TGTWKSFFAECEALRNTRHR 511
GN+ IG G+F V ++ G VAVK++D + + + F E + H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNEHGNGLNFLERLNIAI 569
N+VKL + + L LV E+ G + D++ HG K + F +
Sbjct: 74 NIVKLFEVIET-----EKTLYLVXEYASGGEVFDYLVAHGRXKEKEARA-KFRQ------ 121
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I SA+ Y H IVH DLK N+LLD D K+ DFG + GN+
Sbjct: 122 -IVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFT--FGNK-----LD 170
Query: 630 VLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y PE G+K DV+S GV+L + +G P
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ +A+KVL +E G E E + RH N++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + + L+ EF G L + + + F+E ++A AL Y
Sbjct: 82 Y-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYC 130
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL---ARSLLERIGNQSSISSTHVLKGSI 635
H E ++H D+KP N+L+ K+ DFG A SL R + G++
Sbjct: 131 H---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR-----------XMCGTL 176
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
Y+PPE G+ D++ GV+ E GM P
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 24/254 (9%)
Query: 460 ENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLV 514
E +IG+G FG V G L+ + VA+K L + T + F E + H N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
L + + + +V E++ NGSL ++ +KN+ ++ + + I++
Sbjct: 87 HLEGVVT-----KSKPVMIVTEYMENGSLDTFL---KKND--GQFTVIQLVGMLRGISAG 136
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
+ YL + + VH DL NIL++ ++ KV DFGL+R L + + + +T K
Sbjct: 137 MKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIP 190
Query: 635 IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNA 693
I + PE K ++A DV+S+G+++ E+ + G P E +V +K VE + +
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDV--IKAVEEGYRLPS 248
Query: 694 QQVLDRELRQLMMS 707
L QLM+
Sbjct: 249 PMDCPAALYQLMLD 262
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 23/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIES---TGTWKSFFAECEALRNTRHR 511
+F NL+G GSF VY+ + G+ VA+K++D ++ G + E + +H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
++++L F++ ++ LV E NG + ++ K N E + I
Sbjct: 72 SILELYNY-----FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN-----EARHFMHQI 121
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ + YLH+ I+H DL N+LL +M K+ DFGLA L + + L
Sbjct: 122 ITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQL------KMPHEKHYTL 172
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ YI PE DV+S G M + G P
Sbjct: 173 CGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 113 ----CIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+AR + +++
Sbjct: 168 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---------ASYYR 215
Query: 632 KG-----SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
KG + ++PPE + ++ D +SFGV+L EIF+
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 99 ----CIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+AR + +++
Sbjct: 154 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---------ASYYR 201
Query: 632 KG-----SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
KG + ++PPE + ++ D +SFGV+L EIF+
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 40/279 (14%)
Query: 451 RRATGNFSHENLIGSGSFGSV-YKGYLREGISVAVKVLD---IESTGTWKSFFAECEALR 506
+R G + +G GSFG V + + VA+K + ++ + E L+
Sbjct: 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLK 64
Query: 507 NTRHRNLVKL---ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLE 563
RH +++KL IT+ + + +V E+ G G L D+I +++ G F +
Sbjct: 65 LLRHPHIIKLYDVITTPTDI--------VMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQ 115
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
+ I A++Y H IVH DLKP N+LLD+++ K+ DFGL+ + + GN
Sbjct: 116 Q------IICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD--GNFL 164
Query: 624 SISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFA----GE 678
S GS Y PE G+ DV+S G++L + G P + F +
Sbjct: 165 KTSC-----GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK 219
Query: 679 VSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHD 717
V+ +V +F Q L +R+++++ Q I + +
Sbjct: 220 VNSCVYVMPDFLSPGAQSL---IRRMIVADPMQRITIQE 255
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 125 ----CIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+AR + +++
Sbjct: 180 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---------ASYYR 227
Query: 632 KG-----SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
KG + ++PPE + ++ D +SFGV+L EIF+
Sbjct: 228 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 40/231 (17%)
Query: 456 NFSHENLIGSGSFGSVYKGYLREG---ISVAVKVL-DIESTGTWKSFFAECEAL-RNTRH 510
+ +++IG G+FG V K +++ + A+K + + S + F E E L + H
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 82
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGLN 560
N++ L+ +C ++ +L L E+ +G+L D++ R N + L+
Sbjct: 83 PNIINLLGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 561 FLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIG 620
+ L+ A D+A +DYL + +H +L NIL+ E+ AK+ DFGL+R G
Sbjct: 138 SQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR------G 188
Query: 621 NQSSISSTHVLKGSIGYIPPEYGLGEK-----PSTAGDVYSFGVMLLEIFT 666
+ + K ++G +P + E +T DV+S+GV+L EI +
Sbjct: 189 QEVYV------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 115 ----CIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 169
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+AR + +++
Sbjct: 170 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---------ASYYR 217
Query: 632 KG-----SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
KG + ++PPE + ++ D +SFGV+L EIF+
Sbjct: 218 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 463 IGSGSFGSVY--------KGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNT-RHRN 512
+G G+FG V K +E ++VAVK+L ++T +E E ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLN--------FL 562
++ L+ +C+ L ++ + G+L +++ R E+ +N F
Sbjct: 103 IINLLGACTQDGP-----LYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++ +A ++YL + +H DL N+L+ E+ K+ DFGLAR I N
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD----INNI 210
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
T + + ++ PE + DV+SFGV++ EIFT G SP
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 99 ----CIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+AR + +++
Sbjct: 154 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---------ASYYR 201
Query: 632 KG-----SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
KG + ++PPE + ++ D +SFGV+L EIF+
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 105 ----CIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+AR + +++
Sbjct: 160 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---------ASYYR 207
Query: 632 KG-----SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
KG + ++PPE + ++ D +SFGV+L EIF+
Sbjct: 208 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 43/239 (17%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTR 509
+R +F LIGSG FG V+K R +G + ++ + + + E +AL
Sbjct: 8 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLD 63
Query: 510 HRNLVKLITSCSSLDFK------------------------NMEFLALVYEFLGNGSLGD 545
H N+V D+ + L + EF G+L
Sbjct: 64 HVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQ 123
Query: 546 WIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAK 605
WI R G L+ + L + I +DY+H+ ++H DLKP NI L + K
Sbjct: 124 WIEKRR----GEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVK 176
Query: 606 VGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+GDFGL SL N + + KG++ Y+ PE + D+Y+ G++L E+
Sbjct: 177 IGDFGLVTSL----KNDGKRTRS---KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 113 ----CIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+AR + +++
Sbjct: 168 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---------ASYYR 215
Query: 632 KG-----SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
KG + ++PPE + ++ D +SFGV+L EIF+
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 98 ----CIGVSLQSLPRFILM-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+AR + +++
Sbjct: 153 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---------ASYYR 200
Query: 632 KG-----SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
KG + ++PPE + ++ D +SFGV+L EIF+
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 26/255 (10%)
Query: 447 YDELRRATGNFSHENLIGS-GSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEA 504
Y+ + R +IG G FG VYK +E + A KV+D +S + + E +
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 505 LRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER 564
L + H N+VKL+ + F L ++ EF G++ + + + + + +
Sbjct: 61 LASCDHPNIVKLLDA-----FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCK 115
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+ AL+YLH++ I+H DLK GNIL D K+ DFG++ ++
Sbjct: 116 QTL-----DALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK-----NTRTX 162
Query: 625 ISSTHVLKGSIGYIPPEYGLGE----KP-STAGDVYSFGVMLLEIFTGMSPTHESFAGEV 679
I G+ ++ PE + E +P DV+S G+ L+E+ P HE V
Sbjct: 163 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 222
Query: 680 SLVKWVESNFPKNAQ 694
L+K +S P AQ
Sbjct: 223 -LLKIAKSEPPTLAQ 236
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
+G GS+GSVYK +E G VA+K + +ES + E ++ ++VK S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSY- 93
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
FKN + L +V E+ G GS+ D I K L E I L+YLH
Sbjct: 94 ---FKNTD-LWIVMEYCGAGSVSDIIRLRNKT-----LTEDEIATILQSTLKGLEYLHF- 143
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
+ +H D+K GNILL+ + AK+ DFG+A L + + ++ + G+ ++ PE
Sbjct: 144 --MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI------GTPFWMAPE 195
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ D++S G+ +E+ G P
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 113 ----CIGVSLQSLPRFILM-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+AR + +++
Sbjct: 168 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---------ASYYR 215
Query: 632 KG-----SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
KG + ++PPE + ++ D +SFGV+L EIF+
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 98 ----CIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+AR + +++
Sbjct: 153 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---------ASYYR 200
Query: 632 KG-----SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
KG + ++PPE + ++ D +SFGV+L EIF+
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 115/275 (41%), Gaps = 43/275 (15%)
Query: 439 KHSPQMISYDELRRAT-------------GNFSHENLIGSGSFGSVYKGYLRE-GISVAV 484
+ PQ +S+++ R A NF IG GS G V +R G VAV
Sbjct: 3 QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAV 59
Query: 485 KVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLG 544
K +D+ + F E +R+ +H N+V++ S + + L +V EFL G+L
Sbjct: 60 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELWVVMEFLEGGALT 114
Query: 545 DWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA 604
D + R NE + + + AL LH ++H D+K +ILL D
Sbjct: 115 DIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 164
Query: 605 KVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
K+ DFG + + + + L G+ ++ PE D++S G+M++E+
Sbjct: 165 KLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 218
Query: 665 FTGMSPTHESFAGEVSLVKWVESNFP---KNAQQV 696
G P + +K + N P KN +V
Sbjct: 219 VDGEPPYFNE--PPLKAMKMIRDNLPPRLKNLHKV 251
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
IG GS G V + G VAVK++D+ + F E +R+ +H N+V++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS-- 110
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
+ E L ++ EFL G+L D + R NE + + AL YLH
Sbjct: 111 ---YLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA-------TVCEAVLQALAYLHAQ 160
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
++H D+K +ILL D K+ DFG + + L G+ ++ PE
Sbjct: 161 G---VIHRDIKSDSILLTLDGRVKLSDFGFCAQI------SKDVPKRKXLVGTPYWMAPE 211
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+T D++S G+M++E+ G P
Sbjct: 212 VISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 139 ----CIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+AR + R G +
Sbjct: 194 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-RAGYYRKGGCAML- 248
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
+ ++PPE + ++ D +SFGV+L EIF+
Sbjct: 249 --PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 90 ----CIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+AR + +++
Sbjct: 145 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---------ASYYR 192
Query: 632 KG-----SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
KG + ++PPE + ++ D +SFGV+L EIF+
Sbjct: 193 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 115/275 (41%), Gaps = 43/275 (15%)
Query: 439 KHSPQMISYDELRRAT-------------GNFSHENLIGSGSFGSVYKGYLRE-GISVAV 484
+ PQ +S+++ R A NF IG GS G V +R G VAV
Sbjct: 5 QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAV 61
Query: 485 KVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLG 544
K +D+ + F E +R+ +H N+V++ S + + L +V EFL G+L
Sbjct: 62 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELWVVMEFLEGGALT 116
Query: 545 DWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA 604
D + R NE + + + AL LH ++H D+K +ILL D
Sbjct: 117 DIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 166
Query: 605 KVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
K+ DFG + + + + L G+ ++ PE D++S G+M++E+
Sbjct: 167 KLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 220
Query: 665 FTGMSPTHESFAGEVSLVKWVESNFP---KNAQQV 696
G P + +K + N P KN +V
Sbjct: 221 VDGEPPYFNE--PPLKAMKMIRDNLPPRLKNLHKV 253
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 119/284 (41%), Gaps = 44/284 (15%)
Query: 430 KPIGVSTLFKHSPQMISYDELRRAT-------------GNFSHENLIGSGSFGSVYKGYL 476
KP G + + PQ +S+++ R A NF IG GS G V +
Sbjct: 40 KPPGPRSP-QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATV 95
Query: 477 RE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535
R G VAVK +D+ + F E +R+ +H N+V++ S D L +V
Sbjct: 96 RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE-----LWVVM 150
Query: 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGN 595
EFL G+L D + R NE + + + + AL LH ++H D+K +
Sbjct: 151 EFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQG---VIHRDIKSDS 200
Query: 596 ILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVY 655
ILL D K+ DFG + + + + L G+ ++ PE D++
Sbjct: 201 ILLTHDGRVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPELISRLPYGPEVDIW 254
Query: 656 SFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP---KNAQQV 696
S G+M++E+ G P + +K + N P KN +V
Sbjct: 255 SLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPRLKNLHKV 296
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 29/217 (13%)
Query: 460 ENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLV 514
E +IG+G FG V G+L+ I VA+K L T + F +E + H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 515 KL---ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
L +T + + ++ EF+ NGSL ++ R+N+ ++ + + I
Sbjct: 72 HLEGVVTKSTPV--------MIITEFMENGSLDSFL---RQND--GQFTVIQLVGMLRGI 118
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A+ + YL ++ VH L NIL++ ++ KV DFGL+R L + + S + T L
Sbjct: 119 AAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED---DTSDPTYTSAL 172
Query: 632 KGSIG--YIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
G I + PE K ++A DV+S+G+++ E+ +
Sbjct: 173 GGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 116 ----CIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+AR + R G +
Sbjct: 171 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-RAGYYRKGGCAML- 225
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
+ ++PPE + ++ D +SFGV+L EIF+
Sbjct: 226 --PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 461 NLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVK 515
++G G FG VY+G E I+VAVK + T + F +E ++N H ++VK
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
LI E ++ E G LG ++ + N L L + ++ I A+
Sbjct: 90 LIGIIEE------EPTWIIMELYPYGELGHYLERNK-----NSLKVLTLVLYSLQICKAM 138
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
YL + + VH D+ NIL+ K+GDFGL+R + + ++S++ + I
Sbjct: 139 AYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT-----RLPI 190
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ PE + +TA DV+ F V + EI + G P
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 461 NLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVK 515
++G G FG VY+G E I+VAVK + T + F +E ++N H ++VK
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
LI E ++ E G LG ++ + N L L + ++ I A+
Sbjct: 74 LIGIIEE------EPTWIIMELYPYGELGHYLERNK-----NSLKVLTLVLYSLQICKAM 122
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
YL + + VH D+ NIL+ K+GDFGL+R + + ++S++ + I
Sbjct: 123 AYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT-----RLPI 174
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ PE + +TA DV+ F V + EI + G P
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 461 NLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVK 515
++G G FG VY+G E I+VAVK + T + F +E ++N H ++VK
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
LI E ++ E G LG ++ + N L L + ++ I A+
Sbjct: 78 LIGIIEE------EPTWIIMELYPYGELGHYLERNK-----NSLKVLTLVLYSLQICKAM 126
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
YL + + VH D+ NIL+ K+GDFGL+R + + ++S++ + I
Sbjct: 127 AYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT-----RLPI 178
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
++ PE + +TA DV+ F V + EI + G P
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 463 IGSGSFGSVY--------KGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNT-RHRN 512
+G G+FG V K +E ++VAVK+L ++T +E E ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLN--------FL 562
++ L+ +C+ L ++ + G+L +++ R E+ +N F
Sbjct: 103 IINLLGACTQDGP-----LYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ ++ +A ++YL + +H DL N+L+ E+ K+ DFGLAR I N
Sbjct: 158 DLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARD----INNI 210
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
T + + ++ PE + DV+SFGV++ EIFT G SP
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G VYK +G VA+K LD E G + E L+ H N+V LI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
S L LV+EF+ + +E+ GL + I I + L + +
Sbjct: 89 HS-----ERCLTLVFEFMEKDL------KKVLDENKTGL---QDSQIKIYLYQLLRGVAH 134
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I+H DLKP N+L++ D K+ DFGLAR+ S TH + ++ Y P
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLARAF-----GIPVRSYTHEVV-TLWYRAP 188
Query: 641 EYGLGEKP-STAGDVYSFGVMLLEIFTG 667
+ +G K ST+ D++S G + E+ TG
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 116/277 (41%), Gaps = 55/277 (19%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT--RHRNLVKLITSC 520
IG G +G V+ G R G VAVKV +W F E E + RH N++ I +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASW---FRETEIYQTVLMRHENILGFIAA- 99
Query: 521 SSLDFK---NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
D K + L L+ ++ NGSL D++ L+ L +A S L +
Sbjct: 100 ---DIKGTGSWTQLYLITDYHENGSLYDYLKS-------TTLDAKSMLKLAYSSVSGLCH 149
Query: 578 LHNDC-----EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
LH + + I H DLK NIL+ ++ T + D GLA + +T V
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-- 207
Query: 633 GSIGYIPPEYGLGE-------KPSTAGDVYSFGVMLLEI----------------FTGMS 669
G+ Y+PPE L E + D+YSFG++L E+ + +
Sbjct: 208 GTKRYMPPEV-LDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV 266
Query: 670 PTHESFAG--EVSLVKWVESNFPKNAQQVLDRELRQL 704
P+ S+ E+ +K + +FP D LRQ+
Sbjct: 267 PSDPSYEDMREIVCIKKLRPSFPNRWSS--DECLRQM 301
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G VYK +G VA+K LD E G + E L+ H N+V LI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
S L LV+EF+ + +E+ GL + I I + L + +
Sbjct: 89 HS-----ERCLTLVFEFMEKDL------KKVLDENKTGL---QDSQIKIYLYQLLRGVAH 134
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I+H DLKP N+L++ D K+ DFGLAR+ S TH + ++ Y P
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLARAF-----GIPVRSYTHEV-VTLWYRAP 188
Query: 641 EYGLGEKP-STAGDVYSFGVMLLEIFTG 667
+ +G K ST+ D++S G + E+ TG
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 21 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G + + K + ++ ++A+AL
Sbjct: 79 YGY-----FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI------TELANALS 127
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + SS +T L G++
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTT--LCGTLD 176
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVL 260
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 110/257 (42%), Gaps = 43/257 (16%)
Query: 430 KPIGVSTLFKHSPQMISYDELRRAT-------------GNFSHENLIGSGSFGSVYKGYL 476
KP G + + PQ +S+++ R A NF IG GS G V +
Sbjct: 117 KPPGPRSP-QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK---IGEGSTGIVCIATV 172
Query: 477 RE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535
R G VAVK +D+ + F E +R+ +H N+V++ S + + L +V
Sbjct: 173 RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDELWVVM 227
Query: 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGN 595
EFL G+L D + R NE + + + + AL LH ++H D+K +
Sbjct: 228 EFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQG---VIHRDIKSDS 277
Query: 596 ILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS--IGYIPPEYGLGEKPSTAGD 653
ILL D K+ DFG + + + + + T I +P YG D
Sbjct: 278 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--YG------PEVD 329
Query: 654 VYSFGVMLLEIFTGMSP 670
++S G+M++E+ G P
Sbjct: 330 IWSLGIMVIEMVDGEPP 346
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 109/247 (44%), Gaps = 47/247 (19%)
Query: 452 RATGNFSHENLIGSGSFGSVYKGYLREGIS---VAVKVLDIESTGTWKSFFAECEALRNT 508
R +F ++G G+FG V K R + A+K + + + +E L +
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKA--RNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 509 RH-------------RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEH 555
H RN VK +T+ K L + E+ NG+L D IH E N+
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAV-----KKKSTLFIQMEYCENGTLYDLIHSENLNQQ 114
Query: 556 GNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615
+ E + I AL Y+H+ I+H DLKP NI +DE K+GDFGLA+++
Sbjct: 115 RD-----EYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 616 -----LERIGNQSSISSTHVLKGSIG---YIPPEY--GLGEKPSTAGDVYSFGVMLLEIF 665
+ ++ +Q+ S+ L +IG Y+ E G G D+YS G++ E+
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI-DMYSLGIIFFEMI 225
Query: 666 ----TGM 668
TGM
Sbjct: 226 YPFSTGM 232
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 21 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G + + K + ++ ++A+AL
Sbjct: 79 YGY-----FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI------TELANALS 127
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + S L G++
Sbjct: 128 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--------VHAPSSRRXXLXGTLD 176
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVL 260
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 101/232 (43%), Gaps = 29/232 (12%)
Query: 455 GNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLD---IESTGTWKSFFAECEAL-RNTR 509
+F +IG GSFG V + E + AVKVL I K +E L +N +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN--I 567
H LV L F+ + L V +++ G L + ER FLE
Sbjct: 98 HPFLVGL-----HFSFQTADKLYFVLDYINGGELFYHLQRER--------CFLEPRARFY 144
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISS 627
A +IASAL YLH+ + IV+ DLKP NILLD + DFGL + +E S+
Sbjct: 145 AAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH------NST 195
Query: 628 THVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEV 679
T G+ Y+ PE + D + G +L E+ G+ P + E+
Sbjct: 196 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 140/282 (49%), Gaps = 34/282 (12%)
Query: 95 LSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLR 154
L+ IT L N T+L + + NQ P + NL+N L+ L + N+ T I L+
Sbjct: 75 LTDITPLKNLTKLVDILMNNNQIADITP--LANLTN-LTGLTLFNNQI-----TDIDPLK 126
Query: 155 SLTLLN---LSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSG 211
+LT LN LS N+IS ++ + L LQ L+ + NQ++ P L NL L ++D+S
Sbjct: 127 NLTNLNRLELSSNTISD--ISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISS 182
Query: 212 NELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEI 271
N++ S+I + NL S+ +NN+++ P IL+ NL + L+G ++I
Sbjct: 183 NKV-SDI-SVLAKLTNLESLIATNNQISDITPLGILT--------NLDELSLNGNQLKDI 232
Query: 272 GMLG---NVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVL 328
G L N+ +DL+ N +S P L +L + N+ S P LA L L L
Sbjct: 233 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNL 288
Query: 329 DLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFR 370
+L+ N+L P + NL+ L L L FNN+ + P + +
Sbjct: 289 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 328
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 41/244 (16%)
Query: 26 LPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVP-PGLGNLPFLKMYN--- 81
L NL NF N+ T P L NLT + I M +N + P L NL L ++N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI 119
Query: 82 ---------IGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVL 132
N++ S + +S I++L+ T L L F NQ P + NL+ L
Sbjct: 120 TDIDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQLNFSSNQVTDLKP--LANLT-TL 175
Query: 133 SKLYMGGNRFYG-KIPTSIGRLRSLT--------------LLNLSYNSISGEILTEIGQL 177
+L + N+ + + L SL L NL S++G L +IG L
Sbjct: 176 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTL 235
Query: 178 QELQSL---DLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLS 234
L +L DLA NQIS P L L KL ++ L N++++ P L +++L+
Sbjct: 236 ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELN 291
Query: 235 NNKL 238
N+L
Sbjct: 292 ENQL 295
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 463 IGSGSFGSVYKGYLREGIS------VAVKVLDIESTGTWK-SFFAECEALRNTRHRNLVK 515
+G GSFG VY+G R+ I VAVK ++ ++ + F E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNG----LNFLERLNIAIDI 571
L+ S K L +V E + +G L ++ R N E + +A +I
Sbjct: 85 LLGVVS----KGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A + YL+ VH DL N ++ D T K+GDFG+ R + E + +
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE---------TAYYR 187
Query: 632 KGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEI 664
KG G +P + E +T+ D++SFGV+L EI
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 42 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 100 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 148
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + SS +T L G++
Sbjct: 149 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTT--LCGTLD 197
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 258 GARDLISRLLKHNPSQRPMLREVL 281
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 27/262 (10%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ +A+KVL +E G E E + RH N+++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + L+ E+ G++ + K + ++ ++A+AL Y
Sbjct: 76 Y-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALSYC 124
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H D+KP N+LL K+ DFG + + SS +T L G++ Y+
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTT--LCGTLDYL 173
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQVL 697
PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 698 DRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 234 RDLISRLLKHNPSQRPMLREVL 255
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 27/238 (11%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
IG GS G V +R G VAVK +D+ + F E +R+ +H N+V++ S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 85
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
+ + L +V EFL G+L D + R NE + + + AL LH
Sbjct: 86 ---YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQ 135
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
++H D+K +ILL D K+ DFG + + + + L G+ ++ PE
Sbjct: 136 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPE 186
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP---KNAQQV 696
D++S G+M++E+ G P + +K + N P KN +V
Sbjct: 187 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPRLKNLHKV 242
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 463 IGSGSFGSVYKGYLR------EGISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVK 515
+G G+FG VY+G + + VAVK L ++ S F E + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
C + +++ L+ E + G L ++ R + + L L+ L++A DIA
Sbjct: 99 ----CIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
YL E +H D+ N LL AK+GDFG+A+ + +++
Sbjct: 154 CQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYR---------ASYYR 201
Query: 632 KG-----SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
KG + ++PPE + ++ D +SFGV+L EIF+
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 21 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 79 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 127
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + SS +T L G++
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTT--LCGTLD 176
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 177 YLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 237 GARDLISRLLKHNPSQRPXLREVL 260
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 27/262 (10%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ +A+KVL +E G E E + RH N+++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + L+ E+ G++ + K + ++ ++A+AL Y
Sbjct: 79 Y-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALSYC 127
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H D+KP N+LL K+ DFG + + SS +T L G++ Y+
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTT--LCGTLDYL 176
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQVL 697
PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 698 DRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 237 RDLISRLLKHNPSQRPMLREVL 258
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 463 IGSGSFGSVYKGYLREGIS------VAVKVLDIESTGTWK-SFFAECEALRNTRHRNLVK 515
+G GSFG VY+G R+ I VAVK ++ ++ + F E ++ ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNG----LNFLERLNIAIDI 571
L+ S K L +V E + +G L ++ R N E + +A +I
Sbjct: 84 LLGVVS----KGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A + YL+ VH DL N ++ D T K+GDFG+ R + E + +
Sbjct: 139 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE---------TDYYR 186
Query: 632 KGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEI 664
KG G +P + E +T+ D++SFGV+L EI
Sbjct: 187 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVL---------DIESTGTWKSFFA 500
R NF ++G GSFG V ++E G AVKVL D+E T T K
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRI-- 76
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLN 560
L R+ + + C F+ + L V EF+ G L I R+ +
Sbjct: 77 ----LSLARNHPFLTQLFCC----FQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF 128
Query: 561 FLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIG 620
+ A +I SAL +LH+ I++ DLK N+LLD + K+ DFG+ + E I
Sbjct: 129 Y------AAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK---EGIC 176
Query: 621 NQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
N +T G+ YI PE A D ++ GV+L E+ G +P
Sbjct: 177 NG---VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 103/229 (44%), Gaps = 34/229 (14%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKG-YLREGISVAVKVLD---IESTGTWKSFFAECEALR 506
R G++ + +G G+FG V G + G VAVK+L+ I S E + L+
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK 71
Query: 507 NTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNG-LNFLERL 565
RH +++KL S+ + +V E++ G L D+I NG L+ E
Sbjct: 72 LFRHPHIIKLYQVIST-----PSDIFMVMEYVSGGELFDYICK-------NGRLDEKESR 119
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+ I S +DY H +VH DLKP N+LLD M AK+ DFGL+ + +
Sbjct: 120 RLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLS----------NMM 166
Query: 626 SSTHVLKGSIG---YIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSP 670
S L+ S G Y PE G D++S GV+L + G P
Sbjct: 167 SDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 27/238 (11%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
IG GS G V +R G VAVK +D+ + F E +R+ +H N+V++ S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 89
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
+ + L +V EFL G+L D + R NE + + + AL LH
Sbjct: 90 ---YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQ 139
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
++H D+K +ILL D K+ DFG + + + + L G+ ++ PE
Sbjct: 140 G---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX------LVGTPYWMAPE 190
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP---KNAQQV 696
D++S G+M++E+ G P + +K + N P KN +V
Sbjct: 191 LISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPRLKNLHKV 246
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 15 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 73 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 121
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + SS +T L G++
Sbjct: 122 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTT--LCGTLD 170
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 171 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 230
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 231 GARDLISRLLKHNPSQRPMLREVL 254
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 27/262 (10%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ +A+KVL +E G E E + RH N+++L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + L+ E+ G++ + K + ++ ++A+AL Y
Sbjct: 93 Y-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALSYC 141
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H D+KP N+LL K+ DFG + + SS +T L G++ Y+
Sbjct: 142 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTT--LCGTLDYL 190
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQVL 697
PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 191 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 250
Query: 698 DRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 251 RDLISRLLKHNPSQRPMLREVL 272
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 463 IGSGSFGSVYKGYLREGIS------VAVKVLDIESTGTWK-SFFAECEALRNTRHRNLVK 515
+G GSFG VY+G R+ I VAVK ++ ++ + F E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNG----LNFLERLNIAIDI 571
L+ S K L +V E + +G L ++ R N E + +A +I
Sbjct: 85 LLGVVS----KGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A + YL+ VH DL N ++ D T K+GDFG+ R + E + +
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE---------TDYYR 187
Query: 632 KGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEI 664
KG G +P + E +T+ D++SFGV+L EI
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 19 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 77 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 125
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + SS +T L G++
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTT--LCGTLD 174
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVL 258
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 132/307 (42%), Gaps = 44/307 (14%)
Query: 459 HENLIGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWKSFFAECEALRNTR-HRNLVKL 516
E+++G G+ V L AVK+++ + F E E L + HRN+++L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
I D LV+E + GS+ IH R N LE + D+ASALD
Sbjct: 77 IEFFEEEDR-----FYLVFEKMRGGSILSHIHKRRH------FNELEASVVVQDVASALD 125
Query: 577 YLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVLK- 632
+LHN I H DLKP NIL + + K+ DFGL S ++ G+ S IS+ +L
Sbjct: 126 FLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLG-SGIKLNGDCSPISTPELLTP 181
Query: 633 -GSIGYIPPEY--GLGEKPS---TAGDVYSFGVMLLEIFTGMSPTHESFAGEV-SLVKWV 685
GS Y+ PE E+ S D++S GV+L + +G P F G S W
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP----FVGRCGSDCGWD 237
Query: 686 ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREAL 745
Q +L ++IQ + +SC + ++ +R+A
Sbjct: 238 RGEACPACQNML------------FESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAK 285
Query: 746 RRLKNAQ 752
+RL AQ
Sbjct: 286 QRLSAAQ 292
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 139/282 (49%), Gaps = 34/282 (12%)
Query: 95 LSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLR 154
L+ IT L N T+L + + NQ P + NL+N L+ L + N+ T I L+
Sbjct: 75 LTDITPLKNLTKLVDILMNNNQIADITP--LANLTN-LTGLTLFNNQI-----TDIDPLK 126
Query: 155 SLTLLN---LSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSG 211
+LT LN LS N+IS ++ + L LQ L + NQ++ P L NL L ++D+S
Sbjct: 127 NLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISS 182
Query: 212 NELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEI 271
N++ S+I + NL S+ +NN+++ P IL+ NL + L+G ++I
Sbjct: 183 NKV-SDI-SVLAKLTNLESLIATNNQISDITPLGILT--------NLDELSLNGNQLKDI 232
Query: 272 GMLG---NVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVL 328
G L N+ +DL+ N +S P L +L + N+ S P LA L L L
Sbjct: 233 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNL 288
Query: 329 DLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFR 370
+L+ N+L P + NL+ L L L FNN+ + P + +
Sbjct: 289 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 328
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 41/244 (16%)
Query: 26 LPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVP-PGLGNLPFLKMYN--- 81
L NL NF N+ T P L NLT + I M +N + P L NL L ++N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI 119
Query: 82 ---------IGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVL 132
N++ S + +S I++L+ T L L+F NQ P + NL+ L
Sbjct: 120 TDIDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQLSFSSNQVTDLKP--LANLT-TL 175
Query: 133 SKLYMGGNRFYG-KIPTSIGRLRSLT--------------LLNLSYNSISGEILTEIGQL 177
+L + N+ + + L SL L NL S++G L +IG L
Sbjct: 176 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTL 235
Query: 178 QELQSL---DLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLS 234
L +L DLA NQIS P L L KL ++ L N++++ P L +++L+
Sbjct: 236 ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELN 291
Query: 235 NNKL 238
N+L
Sbjct: 292 ENQL 295
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 27/262 (10%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ +A+KVL +E G E E + RH N+++L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + L+ E+ G++ + K + ++ ++A+AL Y
Sbjct: 80 Y-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALSYC 128
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H D+KP N+LL K+ DFG + + SS +T L G++ Y+
Sbjct: 129 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTT--LCGTLDYL 177
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQVL 697
PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 237
Query: 698 DRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 238 RDLISRLLKHNPSQRPMLREVL 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 27/262 (10%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ +A+KVL +E G E E + RH N+++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + L+ E+ G++ + K + ++ ++A+AL Y
Sbjct: 81 Y-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALSYC 129
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H D+KP N+LL K+ DFG + + SS +T L G++ Y+
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTT--LCGTLDYL 178
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQVL 697
PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 698 DRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 239 RDLISRLLKHNPSQRPMLREVL 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 27/262 (10%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ +A+KVL +E G E E + RH N+++L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + L+ E+ G++ + K + ++ ++A+AL Y
Sbjct: 73 Y-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALSYC 121
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H D+KP N+LL K+ DFG + + SS +T L G++ Y+
Sbjct: 122 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTT--LCGTLDYL 170
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQVL 697
PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 230
Query: 698 DRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 231 RDLISRLLKHNPSQRPMLREVL 252
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 17 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 75 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 123
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + S L G++
Sbjct: 124 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--------CHAPSSRRTTLSGTLD 172
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVL 256
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 33/219 (15%)
Query: 464 GSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSL 523
G FG V+K L VAVK+ ++ +W+S E + +H NL++ I +
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQSE-REIFSTPGMKHENLLQFIAA--EK 79
Query: 524 DFKNMEF-LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC 582
N+E L L+ F GSL D++ G N + + E ++A ++ L YLH D
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKG-------NIITWNELCHVAETMSRGLSYLHED- 131
Query: 583 EVP----------IVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
VP I H D K N+LL D+TA + DFGLA R TH
Sbjct: 132 -VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAV----RFEPGKPPGDTHGQV 186
Query: 633 GSIGYIPPEYGLG-----EKPSTAGDVYSFGVMLLEIFT 666
G+ Y+ PE G D+Y+ G++L E+ +
Sbjct: 187 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Query: 463 IGSGSFGSVYKGYLRE------GISVAVKVLDIESTGTWKS-FFAECEALRNTRHRNLVK 515
+G G FG V Y + G VAVK L ++ +S + E + LR H +++K
Sbjct: 39 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
C +++ LV E++ GSL D++ H GL L L A I +
Sbjct: 98 YKGCCEDAGAASLQ---LVMEYVPLGSLRDYL-----PRHSIGLAQL--LLFAQQICEGM 147
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
YLH +H DL N+LLD D K+GDFGLA+++ E +
Sbjct: 148 AYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE---GHEXYRVREDGDSPV 201
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
+ PE K A DV+SFGV L E+ T
Sbjct: 202 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 139/282 (49%), Gaps = 34/282 (12%)
Query: 95 LSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLR 154
L+ IT L N T+L + + NQ P + NL+N L+ L + N+ T I L+
Sbjct: 75 LTDITPLKNLTKLVDILMNNNQIADITP--LANLTN-LTGLTLFNNQI-----TDIDPLK 126
Query: 155 SLTLLN---LSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSG 211
+LT LN LS N+IS ++ + L LQ L + NQ++ P L NL L ++D+S
Sbjct: 127 NLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISS 182
Query: 212 NELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEI 271
N++ S+I + NL S+ +NN+++ P IL+ NL + L+G ++I
Sbjct: 183 NKV-SDI-SVLAKLTNLESLIATNNQISDITPLGILT--------NLDELSLNGNQLKDI 232
Query: 272 GMLG---NVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVL 328
G L N+ +DL+ N +S P L +L + N+ S P LA L L L
Sbjct: 233 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNL 288
Query: 329 DLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFR 370
+L+ N+L P + NL+ L L L FNN+ + P + +
Sbjct: 289 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 328
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 148/362 (40%), Gaps = 78/362 (21%)
Query: 26 LPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVP-PGLGNLPFLKMYN--- 81
L NL NF N+ T P L NLT + I M +N + P L NL L ++N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI 119
Query: 82 ---------IGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVL 132
N++ S + +S I++L+ T L L+F NQ P + NL+ L
Sbjct: 120 TDIDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQLSFSSNQVTDLKP--LANLT-TL 175
Query: 133 SKLYMGGNRFYG-KIPTSIGRLRSLT--------------LLNLSYNSISGEILTEIGQL 177
+L + N+ + + L SL L NL S++G L +IG L
Sbjct: 176 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTL 235
Query: 178 QELQSL---DLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLS 234
L +L DLA NQIS P L L KL ++ L N++++ P
Sbjct: 236 ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--------------- 278
Query: 235 NNKLNGNIPKEILSLSSLTTIVN--LSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLP 292
L+ LT + N L++N L+ P I L N+ + L N +S P
Sbjct: 279 --------------LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 322
Query: 293 NSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSL 352
+ L++L +NNK S + LA L + L N++S P L NL + L
Sbjct: 323 --VSSLTKLQRLFFSNNKVSD--VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQL 376
Query: 353 NL 354
L
Sbjct: 377 GL 378
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALR 506
++ +F ++G GSF +V L A+K+L+ I E + +
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 507 NTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN 566
H VKL + F++ E L + NG L +I + G+ R
Sbjct: 66 RLDHPFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFY 115
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSIS 626
A +I SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S +
Sbjct: 116 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQA 167
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 168 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 93 FFVKLY-----FTFQDDEKLYFGLSYAKNGCLLKYI-----RKIGSFDETCTRFYTA-EI 141
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANSF 194
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + S + D+++ G ++ ++ G+ P
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 104/246 (42%), Gaps = 52/246 (21%)
Query: 456 NFSHENLI-----GSGSFGSVYKGYL-----REG-ISVAVKVL-DIESTGTWKSFFAECE 503
F +NL+ G G FG V K R G +VAVK+L + S + +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHG------- 556
L+ H +++KL +CS L L+ E+ GSL ++ RK G
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGP-----LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 557 -----------NGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAK 605
L + ++ A I+ + YL E+ +VH DL NIL+ E K
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMK 190
Query: 606 VGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK-----PSTAGDVYSFGVM 660
+ DFGL+R + E +K S G IP ++ E +T DV+SFGV+
Sbjct: 191 ISDFGLSRDVYE---------EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 661 LLEIFT 666
L EI T
Sbjct: 242 LWEIVT 247
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 17 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 75 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 123
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + SS T L G++
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRDT--LCGTLD 172
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVL 256
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALR 506
++ +F ++G GSF +V L A+K+L+ I E + +
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 507 NTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN 566
H VKL + F++ E L + NG L +I + G+ R
Sbjct: 65 RLDHPFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFY 114
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSIS 626
A +I SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S +
Sbjct: 115 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQA 166
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 167 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALR 506
++ +F ++G GSF +V L A+K+L+ I E + +
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 507 NTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN 566
H VKL + F++ E L + NG L +I + G+ R
Sbjct: 64 RLDHPFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFY 113
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSIS 626
A +I SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S +
Sbjct: 114 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQA 165
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 166 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 104/246 (42%), Gaps = 52/246 (21%)
Query: 456 NFSHENLI-----GSGSFGSVYKGYL-----REGIS-VAVKVL-DIESTGTWKSFFAECE 503
F +NL+ G G FG V K R G + VAVK+L + S + +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHG------- 556
L+ H +++KL +CS L L+ E+ GSL ++ RK G
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGP-----LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 557 -----------NGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAK 605
L + ++ A I+ + YL E+ +VH DL NIL+ E K
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMK 190
Query: 606 VGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK-----PSTAGDVYSFGVM 660
+ DFGL+R + E +K S G IP ++ E +T DV+SFGV+
Sbjct: 191 ISDFGLSRDVYE---------EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 661 LLEIFT 666
L EI T
Sbjct: 242 LWEIVT 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 104/246 (42%), Gaps = 52/246 (21%)
Query: 456 NFSHENLI-----GSGSFGSVYKGYL-----REG-ISVAVKVL-DIESTGTWKSFFAECE 503
F +NL+ G G FG V K R G +VAVK+L + S + +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHG------- 556
L+ H +++KL +CS L L+ E+ GSL ++ RK G
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGP-----LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 557 -----------NGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAK 605
L + ++ A I+ + YL E+ +VH DL NIL+ E K
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMK 190
Query: 606 VGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK-----PSTAGDVYSFGVM 660
+ DFGL+R + E +K S G IP ++ E +T DV+SFGV+
Sbjct: 191 ISDFGLSRDVYE---------EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241
Query: 661 LLEIFT 666
L EI T
Sbjct: 242 LWEIVT 247
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALR 506
++ +F ++G GSF +V L A+K+L+ I E + +
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 507 NTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN 566
H VKL + F++ E L + NG L +I + G+ R
Sbjct: 63 RLDHPFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFY 112
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSIS 626
A +I SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S +
Sbjct: 113 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQA 164
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 165 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 463 IGSGSFGSVYKGYLR----EGISVAVKVLD---IESTGTWKSFFAECEALRNTRHRNLVK 515
+G GSFG V +G + +SVAVK L + F E A+ + HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L + K +V E GSL D + RK++ L L R A+ +A +
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRL---RKHQGHFLLGTLSR--YAVQVAEGM 124
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
YL + +H DL N+LL K+GDFGL R+L + + + H K
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHXVMQEH-RKVPF 178
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE S A D + FGV L E+FT G P
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 27/241 (11%)
Query: 452 RATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE-STGTWKSFFAECEALRNTR 509
+ G + + +G+G FG V + ++ G VA+K E S + + E + ++
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 71
Query: 510 HRNLV---KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN 566
H N+V ++ L ++ LA+ E+ G L +++ + E+ GL
Sbjct: 72 HPNVVSAREVPDGLQKLAPNDLPLLAM--EYCEGGDLRKYLN---QFENCCGLKEGPIRT 126
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQS 623
+ DI+SAL YLH E I+H DLKP NI+L + + K+ D G A+ L +Q
Sbjct: 127 LLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL-----DQG 178
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683
+ + V G++ Y+ PE +K + D +SFG + E TG P F V+
Sbjct: 179 ELCTEFV--GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP----FLPNWQPVQ 232
Query: 684 W 684
W
Sbjct: 233 W 233
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 33/250 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVY----KGYLREGISVAVKVLDIESTGTWKS---FFA 500
DE A + +G GSFG VY KG +++ V + + + + F
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL- 559
E ++ ++V+L+ S + ++ E + G L ++ R N +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 560 ---NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
+ + + +A +IA + YL+ + VH DL N ++ ED T K+GDFG+ R +
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 176
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEIFTGMSPT 671
E + + KG G +P + E +T DV+SFGV+L EI T
Sbjct: 177 E---------TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 227
Query: 672 HESFAGEVSL 681
++ + E L
Sbjct: 228 YQGLSNEQVL 237
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 76 NPHVCRLLGICLT------STVQLIMQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 124
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 177
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 27/241 (11%)
Query: 452 RATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE-STGTWKSFFAECEALRNTR 509
+ G + + +G+G FG V + ++ G VA+K E S + + E + ++
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 70
Query: 510 HRNLV---KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN 566
H N+V ++ L ++ LA+ E+ G L +++ + E+ GL
Sbjct: 71 HPNVVSAREVPDGLQKLAPNDLPLLAM--EYCEGGDLRKYLN---QFENCCGLKEGPIRT 125
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQS 623
+ DI+SAL YLH E I+H DLKP NI+L + + K+ D G A+ L +Q
Sbjct: 126 LLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL-----DQG 177
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683
+ + V G++ Y+ PE +K + D +SFG + E TG P F V+
Sbjct: 178 ELCTEFV--GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP----FLPNWQPVQ 231
Query: 684 W 684
W
Sbjct: 232 W 232
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 33/250 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVY----KGYLREGISVAVKVLDIESTGTWKS---FFA 500
DE A + +G GSFG VY KG +++ V + + + + F
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL- 559
E ++ ++V+L+ S + ++ E + G L ++ R N +
Sbjct: 71 EASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 560 ---NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
+ + + +A +IA + YL+ + VH DL N ++ ED T K+GDFG+ R +
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEIFTGMSPT 671
E + + KG G +P + E +T DV+SFGV+L EI T
Sbjct: 183 E---------TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 233
Query: 672 HESFAGEVSL 681
++ + E L
Sbjct: 234 YQGLSNEQVL 243
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 79 NPHVCRLLGICLT------STVQLIMQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 127
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 128 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 180
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 27/262 (10%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ +A+KVL +E G E E + RH N+++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + L+ E+ G++ + K + ++ ++A+AL Y
Sbjct: 79 Y-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALSYC 127
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H D+KP N+LL K+ DFG + + S L G++ Y+
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--------VHAPSSRRAALCGTLDYL 176
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQVL 697
PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 698 DRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 237 RDLISRLLKHNPSQRPMLREVL 258
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 93/216 (43%), Gaps = 25/216 (11%)
Query: 463 IGSGSFGSVYKGYLR----EGISVAVKVLD---IESTGTWKSFFAECEALRNTRHRNLVK 515
+G GSFG V +G + +SVAVK L + F E A+ + HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L + K +V E GSL D + RK++ L L R A+ +A +
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRL---RKHQGHFLLGTLSR--YAVQVAEGM 128
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
YL + +H DL N+LL K+GDFGL R+L + N K
Sbjct: 129 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPF 182
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE S A D + FGV L E+FT G P
Sbjct: 183 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 77 NPHVCRLLGICLT------STVQLIMQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 125
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 126 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 178
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 463 IGSGSFGSVYKGYLRE--------GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLV 514
+G G+F ++KG RE V +KVLD +SFF + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
C D +N+ LV EF+ GSL ++ +KN+ N +N L +L +A +A+A
Sbjct: 76 LNYGVCVCGD-ENI----LVQEFVKFGSLDTYL---KKNK--NCINILWKLEVAKQLAAA 125
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
+ +L E ++H ++ NILL + K G+ + L G ++ +L+
Sbjct: 126 MHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIK--LSDPGISITVLPKDILQER 180
Query: 635 IGYIPPEYGLGEKPST---AGDVYSFGVMLLEIFTG 667
I ++PPE E P A D +SFG L EI +G
Sbjct: 181 IPWVPPE--CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 33/250 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVY----KGYLREGISVAVKVLDIESTGTWKS---FFA 500
DE A + +G GSFG VY KG +++ V + + + + F
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL- 559
E ++ ++V+L+ S + ++ E + G L ++ R N +
Sbjct: 100 EASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 560 ---NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
+ + + +A +IA + YL+ + VH DL N ++ ED T K+GDFG+ R +
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEIFTGMSPT 671
E + + KG G +P + E +T DV+SFGV+L EI T
Sbjct: 212 E---------TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 262
Query: 672 HESFAGEVSL 681
++ + E L
Sbjct: 263 YQGLSNEQVL 272
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 86 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 134
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 135 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 187
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 188 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 239
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 80 NPHVCRLLGICLT------STVQLIMQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 128
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 129 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 181
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 78 NPHVCRLLGICLT------STVQLIMQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 126
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 179
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 76 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 124
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 177
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 33/250 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVY----KGYLREGISVAVKVLDIESTGTWKS---FFA 500
DE A + +G GSFG VY KG +++ V + + + + F
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 68
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL- 559
E ++ ++V+L+ S + ++ E + G L ++ R N +
Sbjct: 69 EASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 560 ---NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
+ + + +A +IA + YL+ + VH DL N ++ ED T K+GDFG+ R +
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEIFTGMSPT 671
E + + KG G +P + E +T DV+SFGV+L EI T
Sbjct: 181 E---------TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 231
Query: 672 HESFAGEVSL 681
++ + E L
Sbjct: 232 YQGLSNEQVL 241
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 77 NPHVCRLLGICLT------STVQLIMQLMPFGXLLDYV-----REHKDNIGSQYLLNWCV 125
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 126 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 178
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 179 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 33/250 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVY----KGYLREGISVAVKVLDIESTGTWKS---FFA 500
DE A + +G GSFG VY KG +++ V + + + + F
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL- 559
E ++ ++V+L+ S + ++ E + G L ++ R N +
Sbjct: 71 EASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 560 ---NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
+ + + +A +IA + YL+ + VH DL N ++ ED T K+GDFG+ R +
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEIFTGMSPT 671
E + + KG G +P + E +T DV+SFGV+L EI T
Sbjct: 183 E---------TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 233
Query: 672 HESFAGEVSL 681
++ + E L
Sbjct: 234 YQGLSNEQVL 243
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 32/216 (14%)
Query: 464 GSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS---C 520
G FG V+K L VAVK+ I+ +W++ + E +L +H N+++ I +
Sbjct: 33 ARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQNEY-EVYSLPGMKHENILQFIGAEKRG 90
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
+S+D L L+ F GSL D++ N +++ E +IA +A L YLH
Sbjct: 91 TSVDVD----LWLITAFHEKGSLSDFLKA-------NVVSWNELCHIAETMARGLAYLHE 139
Query: 581 DC-------EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKG 633
D + I H D+K N+LL ++TA + DFGLA + S TH G
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL----KFEAGKSAGDTHGQVG 195
Query: 634 SIGYIPPEYGLG-----EKPSTAGDVYSFGVMLLEI 664
+ Y+ PE G D+Y+ G++L E+
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 93/216 (43%), Gaps = 25/216 (11%)
Query: 463 IGSGSFGSVYKGYLR----EGISVAVKVLD---IESTGTWKSFFAECEALRNTRHRNLVK 515
+G GSFG V +G + +SVAVK L + F E A+ + HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L + K +V E GSL D + RK++ L L R A+ +A +
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRL---RKHQGHFLLGTLSR--YAVQVAEGM 128
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
YL + +H DL N+LL K+GDFGL R+L + N K
Sbjct: 129 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPF 182
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE S A D + FGV L E+FT G P
Sbjct: 183 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 463 IGSGSFGSVYKGYLRE------GISVAVKVLDIESTGTWKS-FFAECEALRNTRHRNLVK 515
+G G FG V Y + G VAVK L + +S + E + LR H +++K
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
C K+++ LV E++ GSL D++ H GL L L A I +
Sbjct: 81 YKGCCEDQGEKSLQ---LVMEYVPLGSLRDYL-----PRHSIGLAQL--LLFAQQICEGM 130
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
YLH+ +H +L N+LLD D K+GDFGLA+++ E +
Sbjct: 131 AYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE---GHEYYRVREDGDSPV 184
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
+ PE K A DV+SFGV L E+ T
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 33/250 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVY----KGYLREGISVAVKVLDIESTGTWKS---FFA 500
DE A + +G GSFG VY KG +++ V + + + + F
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL- 559
E ++ ++V+L+ S + ++ E + G L ++ R N +
Sbjct: 72 EASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 560 ---NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
+ + + +A +IA + YL+ + VH DL N ++ ED T K+GDFG+ R +
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 183
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEIFTGMSPT 671
E + + KG G +P + E +T DV+SFGV+L EI T
Sbjct: 184 E---------TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 234
Query: 672 HESFAGEVSL 681
++ + E L
Sbjct: 235 YQGLSNEQVL 244
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 463 IGSGSFGSVYKGYLREGIS------VAVKVLDIESTGTWK-SFFAECEALRNTRHRNLVK 515
+G GSFG VY+G R+ I VAVK ++ ++ + F E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNG----LNFLERLNIAIDI 571
L+ S K L +V E + +G L ++ R N E + +A +I
Sbjct: 85 LLGVVS----KGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A + YL+ VH DL N ++ D T K+GDFG+ R + E +
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE---------TDXXR 187
Query: 632 KGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEI 664
KG G +P + E +T+ D++SFGV+L EI
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 104/232 (44%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREGISVAVKVLDIE-----STGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG V + V +E S K E + +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 110 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 158
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 159 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 211
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 212 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 263
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 91 FFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 139
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANAF 192
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 463 IGSGSFGSVYKGYLR----EGISVAVKVLD---IESTGTWKSFFAECEALRNTRHRNLVK 515
+G GSFG V +G + +SVAVK L + F E A+ + HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L + K +V E GSL D + RK++ L L R A+ +A +
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRL---RKHQGHFLLGTLSR--YAVQVAEGM 134
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
YL + +H DL N+LL K+GDFGL R+L + + + H K
Sbjct: 135 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ--NDDHXVMQEH-RKVPF 188
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE S A D + FGV L E+FT G P
Sbjct: 189 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 93/216 (43%), Gaps = 25/216 (11%)
Query: 463 IGSGSFGSVYKGYLR----EGISVAVKVLD---IESTGTWKSFFAECEALRNTRHRNLVK 515
+G GSFG V +G + +SVAVK L + F E A+ + HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L + K +V E GSL D + RK++ L L R A+ +A +
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRL---RKHQGHFLLGTLSR--YAVQVAEGM 124
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
YL + +H DL N+LL K+GDFGL R+L + N K
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPF 178
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE S A D + FGV L E+FT G P
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 93/216 (43%), Gaps = 25/216 (11%)
Query: 463 IGSGSFGSVYKGYLR----EGISVAVKVLD---IESTGTWKSFFAECEALRNTRHRNLVK 515
+G GSFG V +G + +SVAVK L + F E A+ + HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L + K +V E GSL D + RK++ L L R A+ +A +
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRL---RKHQGHFLLGTLSR--YAVQVAEGM 124
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
YL + +H DL N+LL K+GDFGL R+L + N K
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPF 178
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE S A D + FGV L E+FT G P
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 93/216 (43%), Gaps = 25/216 (11%)
Query: 463 IGSGSFGSVYKGYLR----EGISVAVKVLD---IESTGTWKSFFAECEALRNTRHRNLVK 515
+G GSFG V +G + +SVAVK L + F E A+ + HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L + K +V E GSL D + RK++ L L R A+ +A +
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRL---RKHQGHFLLGTLSR--YAVQVAEGM 134
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
YL + +H DL N+LL K+GDFGL R+L + N K
Sbjct: 135 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ---NDDHYVMQEHRKVPF 188
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE S A D + FGV L E+FT G P
Sbjct: 189 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 33/250 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVY----KGYLREGISVAVKVLDIESTGTWKS---FFA 500
DE A + +G GSFG VY KG +++ V + + + + F
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL- 559
E ++ ++V+L+ S + ++ E + G L ++ R N +
Sbjct: 78 EASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 560 ---NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
+ + + +A +IA + YL+ + VH DL N ++ ED T K+GDFG+ R +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEIFTGMSPT 671
E + + KG G +P + E +T DV+SFGV+L EI T
Sbjct: 190 E---------TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 240
Query: 672 HESFAGEVSL 681
++ + E L
Sbjct: 241 YQGLSNEQVL 250
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 79 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 127
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 128 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 180
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 76 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 124
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 177
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 16 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 74 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 122
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + S L G++
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--------VHAPSSRRXXLCGTLD 171
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVL 255
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 24/223 (10%)
Query: 463 IGSGSFGSVYKGYLR---EGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV +G R + I VA+KVL E T + E + + + +V+LI
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT-EEMMREAQIMHQLDNPYIVRLI 76
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C + E L LV E G G L ++ G+R E N E L+ ++ + Y
Sbjct: 77 GVCQA------EALMLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLH---QVSMGMKY 125
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L E VH DL N+LL AK+ DFGL+++L + S ++ K + +
Sbjct: 126 LE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL---GADDSYYTARSAGKWPLKW 179
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEV 679
PE K S+ DV+S+GV + E + G P + EV
Sbjct: 180 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV 222
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 78 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 126
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 179
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 463 IGSGSFGSVYKGYLREGIS------VAVKVLDIESTGTWK-SFFAECEALRNTRHRNLVK 515
+G GSFG VY+G R+ I VAVK ++ ++ + F E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNG----LNFLERLNIAIDI 571
L+ S K L +V E + +G L ++ R N E + +A +I
Sbjct: 85 LLGVVS----KGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A + YL+ VH DL N ++ D T K+GDFG+ R + E +
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE---------TDXXR 187
Query: 632 KGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEI 664
KG G +P + E +T+ D++SFGV+L EI
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 16 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 74 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 122
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + S L G++
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--------VHAPSSRRAALCGTLD 171
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVL 255
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 463 IGSGSFGSVYKGYLREGIS------VAVKVLDIESTGTWK-SFFAECEALRNTRHRNLVK 515
+G GSFG VY+G R+ I VAVK ++ ++ + F E ++ ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNG----LNFLERLNIAIDI 571
L+ S K L +V E + +G L ++ R N E + +A +I
Sbjct: 82 LLGVVS----KGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A + YL+ VH DL N ++ D T K+GDFG+ R + E +
Sbjct: 137 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE---------TDXXR 184
Query: 632 KGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEI 664
KG G +P + E +T+ D++SFGV+L EI
Sbjct: 185 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 76 NPHVCRLLGICLT------STVQLITQLMPFGXLLDYV-----REHKDNIGSQYLLNWCV 124
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 177
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 16/224 (7%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITS 519
IG+GS+G K + +G + K LD S + +E LR +H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
+D N L +V E+ G L I K F+ R+ + +A +
Sbjct: 74 I--IDRTNTT-LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+D ++H DLKP N+ LD K+GDFGLAR L + +S + T V G+ Y+
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL----NHDTSFAKTFV--GTPYYMS 184
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEV 679
PE + D++S G +L E+ M P + + AG++
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 79 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 127
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 128 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 180
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 79 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 127
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 128 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 180
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 181 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 83 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 131
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 132 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 184
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 25/243 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 93 FFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 141
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXF 194
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEV--SLVKWVESNF 689
G+ Y+ PE + + D+++ G ++ ++ G+ P G + ++K +E +F
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-LEYDF 253
Query: 690 PKN 692
P+
Sbjct: 254 PEK 256
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 18 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 76 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 124
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + S L G++
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--------VHAPSSRRXXLCGTLD 173
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 234 GARDLISRLLKHNPSQRPMLREVL 257
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 101 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 149
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 150 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 202
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 203 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 254
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 73 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 121
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 122 QIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 174
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 175 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 226
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 91 FFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 139
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXF 192
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 19 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 77 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 125
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + S L G++
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--------VHAPSSRRXXLCGTLD 174
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVL 258
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 25/243 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 93 FFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 141
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXF 194
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEV--SLVKWVESNF 689
G+ Y+ PE + + D+++ G ++ ++ G+ P G + ++K +E +F
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-LEYDF 253
Query: 690 PKN 692
P+
Sbjct: 254 PEK 256
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 93 FFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 141
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXF 194
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 70 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 118
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 119 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 171
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 172 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 223
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 93 FFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 141
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXF 194
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 91 FFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 139
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXF 192
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 82 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 130
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 131 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 183
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 184 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 235
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 16 LGKGKFGNVYLA--REKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 74 YGY-----FHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 122
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + S L G++
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--------VHAPSSRRAALCGTLD 171
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTE 231
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVL 255
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 138/316 (43%), Gaps = 42/316 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVYKGYLRE--GISVAVKVLDIES--TGTWKSFFAECE 503
D L RA + IG G++G V+K + G VA+K + +++ G S E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 504 ALRNTR---HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLN 560
LR+ H N+V+L C+ L LV+E + + L ++ ++ E G
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL--DKVPEPGVPTE 120
Query: 561 FLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIG 620
++ ++ + LD+LH+ +VH DLKP NIL+ K+ DFGLAR
Sbjct: 121 TIK--DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY----S 171
Query: 621 NQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVS 680
Q +++S V ++ Y PE L +T D++S G + E+F P +
Sbjct: 172 FQMALTSVVV---TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
Query: 681 LVKWV-------ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVG----LS 729
L K + E ++P++ RQ S +Q I+ +T I+ +G L
Sbjct: 228 LGKILDVIGLPGEEDWPRDVALP-----RQAFHSKSAQPIEK---FVTDIDELGKDLLLK 279
Query: 730 CTTESPGGRIDIREAL 745
C T +P RI AL
Sbjct: 280 CLTFNPAKRISAYSAL 295
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 104/226 (46%), Gaps = 38/226 (16%)
Query: 462 LIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRN--TRHRNLVKLITS 519
LIG G +G+VYKG L E VAVKV S ++F E R H N+ + I
Sbjct: 20 LIGRGRYGAVYKGSLDER-PVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIVG 75
Query: 520 CSSLDFK-NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
+ ME+L LV E+ NGSL ++ + H + +++ +A + L YL
Sbjct: 76 DERVTADGRMEYL-LVMEYYPNGSLXKYL-----SLHTS--DWVSSCRLAHSVTRGLAYL 127
Query: 579 HNDCEVP--------IVHCDLKPGNILLDEDMTAKVGDFGLARSL----LERIGNQSSIS 626
H E+P I H DL N+L+ D T + DFGL+ L L R G + + +
Sbjct: 128 HT--ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA 185
Query: 627 STHVLKGSIGYIPPEYGLG-------EKPSTAGDVYSFGVMLLEIF 665
+ V G+I Y+ PE G E D+Y+ G++ EIF
Sbjct: 186 ISEV--GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL + F++ E L + NG L +I + G+ R A +I
Sbjct: 75 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 123
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 124 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXF 176
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 16 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 74 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 122
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + S L G++
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--------VHAPSSRRTXLCGTLD 171
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVL 255
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 94 FFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 142
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXF 195
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 96 FFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 144
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 145 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXF 197
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Query: 463 IGSGSFGSVYKGYLRE------GISVAVKVLDIESTGTWKS-FFAECEALRNTRHRNLVK 515
+G G FG V Y + G VAVK L + +S + E + LR H +++K
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
C K+++ LV E++ GSL D++ H GL L L A I +
Sbjct: 81 YKGCCEDQGEKSLQ---LVMEYVPLGSLRDYL-----PRHSIGLAQL--LLFAQQICEGM 130
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
YLH +H +L N+LLD D K+GDFGLA+++ E +
Sbjct: 131 AYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE---GHEYYRVREDGDSPV 184
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
+ PE K A DV+SFGV L E+ T
Sbjct: 185 FWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL + F++ E L + NG L +I + G+ R A +I
Sbjct: 90 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 138
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 139 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXF 191
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 93 FFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 141
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXF 194
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 139/318 (43%), Gaps = 46/318 (14%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVYKGYLRE----GISVAVKVLDIES--TGTWKSFFAE 501
D L RA + IG G++G V+K R+ G VA+K + +++ G S E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIRE 61
Query: 502 CEALRNTR---HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNG 558
LR+ H N+V+L C+ L LV+E + + L ++ ++ E G
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL--DKVPEPGVP 118
Query: 559 LNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618
++ ++ + LD+LH+ +VH DLKP NIL+ K+ DFGLAR
Sbjct: 119 TETIK--DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--- 170
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE 678
Q +++S V ++ Y PE L +T D++S G + E+F P +
Sbjct: 171 -SFQMALTSVVV---TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDV 225
Query: 679 VSLVKWV-------ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVG---- 727
L K + E ++P++ RQ S +Q I+ +T I+ +G
Sbjct: 226 DQLGKILDVIGLPGEEDWPRDVALP-----RQAFHSKSAQPIEK---FVTDIDELGKDLL 277
Query: 728 LSCTTESPGGRIDIREAL 745
L C T +P RI AL
Sbjct: 278 LKCLTFNPAKRISAYSAL 295
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGS-VYKGYLREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF + V L A+K+L+ I E + + H
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 91 FFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 139
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXF 192
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 31/274 (11%)
Query: 453 ATGNFSHENLIGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALR 506
A +F +G G FG+VY RE S +A+KVL +E G E E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 507 NTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN 566
+ RH N+++L F + + L+ E+ G++ + K + ++
Sbjct: 67 HLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI---- 117
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSIS 626
++A+AL Y H+ ++H D+KP N+LL K+ DFG + + S
Sbjct: 118 --TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--------VHAPSS 164
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWV 685
L G++ Y+PPE G D++S GV+ E G P ++ + V
Sbjct: 165 RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 686 ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E FP + + +L+ + SQ L + L
Sbjct: 225 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 114/264 (43%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 19 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 77 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 125
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ +FG + + SS +T L G++
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS------VHAPSSRRTT--LCGTLD 174
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVL 258
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 27/262 (10%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ +A+KVL +E G E E + RH N+++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + L+ E+ G++ + K + ++ ++A+AL Y
Sbjct: 76 Y-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALSYC 124
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H D+KP N+LL K+ DFG + + S L G++ Y+
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--------VHAPSSRRTELCGTLDYL 173
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQVL 697
PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 698 DRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 234 RDLISRLLKHNPSQRPMLREVL 255
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 39/232 (16%)
Query: 463 IGSGSFGSVYKGYLREGI-----------SVAVKVLDIEST-GTWKSFFAECEALRNT-R 509
+G G+FG V L E I VAVK+L ++T +E E ++ +
Sbjct: 36 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGL 559
H+N++ L+ +C+ L ++ E+ G+L +++ R + L
Sbjct: 93 HKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERI 619
+ + ++ A +A ++YL + +H DL N+L+ ED K+ DFGLAR I
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD----I 200
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ T + + ++ PE + DV+SFGV+L EIFT G SP
Sbjct: 201 HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 139/318 (43%), Gaps = 46/318 (14%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVYKGYLRE----GISVAVKVLDIES--TGTWKSFFAE 501
D L RA + IG G++G V+K R+ G VA+K + +++ G S E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIRE 61
Query: 502 CEALRNTR---HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNG 558
LR+ H N+V+L C+ L LV+E + + L ++ ++ E G
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL--DKVPEPGVP 118
Query: 559 LNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618
++ ++ + LD+LH+ +VH DLKP NIL+ K+ DFGLAR
Sbjct: 119 TETIK--DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--- 170
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE 678
Q +++S V ++ Y PE L +T D++S G + E+F P +
Sbjct: 171 -SFQMALTSVVV---TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDV 225
Query: 679 VSLVKWV-------ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVG---- 727
L K + E ++P++ RQ S +Q I+ +T I+ +G
Sbjct: 226 DQLGKILDVIGLPGEEDWPRDVALP-----RQAFHSKSAQPIEK---FVTDIDELGKDLL 277
Query: 728 LSCTTESPGGRIDIREAL 745
L C T +P RI AL
Sbjct: 278 LKCLTFNPAKRISAYSAL 295
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 462 LIGSGSFGSVYKGYLRE-GISVAVKVLDIESTG---TWKSFFAECEALRNTRHRNLVKLI 517
L+G GS+G V K ++ G VA+K +ES K E + L+ RH NLV L+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKF-LESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C K + LV+EF+ + L D NGL++ I + + +
Sbjct: 91 EVC-----KKKKRWYLVFEFVDHTILDDL------ELFPNGLDYQVVQKYLFQIINGIGF 139
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
H+ I+H D+KP NIL+ + K+ DFG AR+L + V + Y
Sbjct: 140 CHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL----AAPGEVYDDEV--ATRWY 190
Query: 638 IPPEYGLGE-KPSTAGDVYSFGVMLLEIFTG 667
PE +G+ K A DV++ G ++ E+F G
Sbjct: 191 RAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 27/262 (10%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ +A+KVL +E G E E + RH N+++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + L+ E+ G++ + K + ++ ++A+AL Y
Sbjct: 76 Y-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALSYC 124
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H D+KP N+LL K+ DFG + + SS + L G++ Y+
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTD--LCGTLDYL 173
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQVL 697
PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 698 DRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 234 RDLISRLLKHNPSQRPMLREVL 255
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 94 FFVKLY-----FTFQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 142
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANSF 195
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 452 RATGNFSHENLIGSGSFGSVYKGYLREGIS---VAVKVLDIESTGTWKSFFAECEALRNT 508
R +F ++G G+FG V K R + A+K + + + +E L +
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKA--RNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 509 RH-------------RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEH 555
H RN VK +T+ K L + E+ N +L D IH E N+
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAV-----KKKSTLFIQMEYCENRTLYDLIHSENLNQQ 114
Query: 556 GNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615
+ E + I AL Y+H+ I+H DLKP NI +DE K+GDFGLA+++
Sbjct: 115 RD-----EYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 616 -----LERIGNQSSISSTHVLKGSIG---YIPPEY--GLGEKPSTAGDVYSFGVMLLEIF 665
+ ++ +Q+ S+ L +IG Y+ E G G D+YS G++ E+
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI-DMYSLGIIFFEMI 225
Query: 666 ----TGM 668
TGM
Sbjct: 226 YPFSTGM 232
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 33/250 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVY----KGYLREGISVAVKVLDIESTGTWKS---FFA 500
DE A + +G GSFG VY KG +++ V + + + + F
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL- 559
E ++ ++V+L+ S + ++ E + G L ++ R N +
Sbjct: 63 EASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 117
Query: 560 ---NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
+ + + +A +IA + YL+ + VH DL N ++ ED T K+GDFG+ R +
Sbjct: 118 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 174
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEIFTGMSPT 671
E + KG G +P + E +T DV+SFGV+L EI T
Sbjct: 175 E---------TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 225
Query: 672 HESFAGEVSL 681
++ + E L
Sbjct: 226 YQGLSNEQVL 235
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 114/264 (43%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 18 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 76 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 124
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ +FG + + SS +T L G++
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS------VHAPSSRRTT--LCGTLD 173
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 234 GARDLISRLLKHNPSQRPMLREVL 257
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 33/250 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVY----KGYLREGISVAVKVLDIESTGTWKS---FFA 500
DE A + +G GSFG VY KG +++ V + + + + F
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL- 559
E ++ ++V+L+ S + ++ E + G L ++ R N +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 560 ---NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
+ + + +A +IA + YL+ + VH DL N + ED T K+GDFG+ R +
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEIFTGMSPT 671
E + + KG G +P + E +T DV+SFGV+L EI T
Sbjct: 177 E---------TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 227
Query: 672 HESFAGEVSL 681
++ + E L
Sbjct: 228 YQGLSNEQVL 237
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 17 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 75 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 123
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + SS + L G++
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTD--LCGTLD 172
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVL 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 31/264 (11%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S +A+KVL +E G E E + RH N+++L
Sbjct: 16 LGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
F + + L+ E+ G++ + K + ++ ++A+AL
Sbjct: 74 YGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALS 122
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y H+ ++H D+KP N+LL K+ DFG + + SS + L G++
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTD--LCGTLD 171
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQ 695
Y+PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 696 VLDRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVL 255
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEV 584
F++ +F+ +V E SL + +H RK + R I + YLHN+
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 161
Query: 585 PIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL 644
++H DLK GN+ L++DM K+GDFGLA + +E G + L G+ YI PE
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKK-----TLCGTPNYIAPEVLC 215
Query: 645 GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL-VKWVESNFPKNAQQVLDRELRQ 703
+ S D++S G +L + G P S E + +K E + P++ V +R+
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
Query: 704 LMMSSES 710
++ + +
Sbjct: 276 MLHADPT 282
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 39/232 (16%)
Query: 463 IGSGSFGSVYKGYLREGI-----------SVAVKVLDIEST-GTWKSFFAECEALRNT-R 509
+G G+FG V L E I VAVK+L ++T +E E ++ +
Sbjct: 77 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----KNEHGNGLNFLERL 565
H+N++ L+ +C+ L ++ E+ G+L +++ R + + N E+L
Sbjct: 134 HKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 566 N------IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERI 619
+ A +A ++YL + +H DL N+L+ ED K+ DFGLAR I
Sbjct: 189 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD----I 241
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ T + + ++ PE + DV+SFGV+L EIFT G SP
Sbjct: 242 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 27/262 (10%)
Query: 463 IGSGSFGSVYKGYLREGISV-AVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ + A+KVL +E G E E + RH N+++L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + L+ E+ G++ + K + ++ ++A+AL Y
Sbjct: 102 Y-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALSYC 150
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H D+KP N+LL K+ DFG + + S L G++ Y+
Sbjct: 151 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS--------VHAPSSRRDDLCGTLDYL 199
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQVL 697
PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 259
Query: 698 DRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 260 RDLISRLLKHNPSQRPMLREVL 281
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 463 IGSGSFGSVYKGYLREGIS------VAVKVLDIESTGTWK-SFFAECEALRNTRHRNLVK 515
+G GSFG VY+G R+ I VAVK ++ ++ + F E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNG----LNFLERLNIAIDI 571
L+ S K L +V E + +G L ++ R N E + +A +I
Sbjct: 85 LLGVVS----KGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A + YL+ VH +L N ++ D T K+GDFG+ R + E + +
Sbjct: 140 ADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE---------TDYYR 187
Query: 632 KGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEI 664
KG G +P + E +T+ D++SFGV+L EI
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL + F++ E L + NG L +I + G+ R A +I
Sbjct: 90 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 138
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 139 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANSF 191
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 33/250 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVY----KGYLREGISVAVKVLDIESTGTWKS---FFA 500
DE A + +G GSFG VY KG +++ V + + + + F
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL- 559
E ++ ++V+L+ S + ++ E + G L ++ R N +
Sbjct: 68 EASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 560 ---NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
+ + + +A +IA + YL+ + VH DL N ++ ED T K+GDFG+ R +
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEIFTGMSPT 671
E + + KG G +P + E +T DV+SFGV+L EI T
Sbjct: 180 E---------TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 230
Query: 672 HESFAGEVSL 681
++ + E L
Sbjct: 231 YQGLSNEQVL 240
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 33/250 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVY----KGYLREGISVAVKVLDIESTGTWKS---FFA 500
DE A + +G GSFG VY KG +++ V + + + + F
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL- 559
E ++ ++V+L+ S + ++ E + G L ++ R N +
Sbjct: 78 EASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 560 ---NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
+ + + +A +IA + YL+ + VH DL N ++ ED T K+GDFG+ R +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEIFTGMSPT 671
E + + KG G +P + E +T DV+SFGV+L EI T
Sbjct: 190 E---------TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 240
Query: 672 HESFAGEVSL 681
++ + E L
Sbjct: 241 YQGLSNEQVL 250
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 39/232 (16%)
Query: 463 IGSGSFGSVYKGYLREGI-----------SVAVKVLDIEST-GTWKSFFAECEALRNT-R 509
+G G+FG V L E I VAVK+L ++T +E E ++ +
Sbjct: 29 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----KNEHGNGLNFLERL 565
H+N++ L+ +C+ L ++ E+ G+L +++ R + + N E+L
Sbjct: 86 HKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 566 N------IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERI 619
+ A +A ++YL + +H DL N+L+ ED K+ DFGLAR I
Sbjct: 141 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD----I 193
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ T + + ++ PE + DV+SFGV+L EIFT G SP
Sbjct: 194 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 245
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 50/249 (20%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
+G+GSFG V+ R G A+KVL E L+ H N +L+ S
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEI----------VVRLKQVEHTNDERLMLSIV 63
Query: 522 SL--------DFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ F++ + + ++ +++ G L + ++ + + A ++
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY------AAEVCL 117
Query: 574 ALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKG 633
AL+YLH+ I++ DLKP NILLD++ K+ DFG A+ + + T+ L G
Sbjct: 118 ALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD---------VTYXLCG 165
Query: 634 SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNA 693
+ YI PE + + + D +SFG+++ E+ G +P + +SN K
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY-------------DSNTMKTY 212
Query: 694 QQVLDRELR 702
+++L+ ELR
Sbjct: 213 EKILNAELR 221
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 39/232 (16%)
Query: 463 IGSGSFGSVYKGYLREGI-----------SVAVKVLDIEST-GTWKSFFAECEALRNT-R 509
+G G+FG V L E I VAVK+L ++T +E E ++ +
Sbjct: 25 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----KNEHGNGLNFLERL 565
H+N++ L+ +C+ L ++ E+ G+L +++ R + + N E+L
Sbjct: 82 HKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 566 N------IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERI 619
+ A +A ++YL + +H DL N+L+ ED K+ DFGLAR I
Sbjct: 137 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD----I 189
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ T + + ++ PE + DV+SFGV+L EIFT G SP
Sbjct: 190 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 241
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 39/232 (16%)
Query: 463 IGSGSFGSVYKGYLREGI-----------SVAVKVLDIEST-GTWKSFFAECEALRNT-R 509
+G G+FG V L E I VAVK+L ++T +E E ++ +
Sbjct: 36 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----KNEHGNGLNFLERL 565
H+N++ L+ +C+ L ++ E+ G+L +++ R + + N E+L
Sbjct: 93 HKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 566 N------IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERI 619
+ A +A ++YL + +H DL N+L+ ED K+ DFGLAR I
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD----I 200
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ T + + ++ PE + DV+SFGV+L EIFT G SP
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 27/262 (10%)
Query: 463 IGSGSFGSVYKGYLREG-ISVAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG+VY ++ +A+KVL +E G E E + RH N+++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F + + L+ E+ G++ + K + ++ ++A+AL Y
Sbjct: 81 Y-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------TELANALSYC 129
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H D+KP N+LL K+ DFG + + SS + L G++ Y+
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTD--LCGTLDYL 178
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE-SFAGEVSLVKWVESNFPKNAQQVL 697
PPE G D++S GV+ E G P ++ + VE FP +
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 698 DRELRQLMMSSESQTIQLHDCL 719
+ +L+ + SQ L + L
Sbjct: 239 RDLISRLLKHNPSQRPMLREVL 260
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 463 IGSGSFGSVYKGYLREGIS------VAVKVLDIESTGTWK-SFFAECEALRNTRHRNLVK 515
+G GSFG VY+G R+ I VAVK ++ ++ + F E ++ ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNG----LNFLERLNIAIDI 571
L+ S K L +V E + +G L ++ R N E + +A +I
Sbjct: 86 LLGVVS----KGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A + YL+ VH +L N ++ D T K+GDFG+ R + E + +
Sbjct: 141 ADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE---------TDYYR 188
Query: 632 KGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEI 664
KG G +P + E +T+ D++SFGV+L EI
Sbjct: 189 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 140/282 (49%), Gaps = 35/282 (12%)
Query: 95 LSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLR 154
L+ IT L N T+L + + NQ P + NL+N L+ L + N+ T I L+
Sbjct: 75 LTDITPLKNLTKLVDILMNNNQIADITP--LANLTN-LTGLTLFNNQI-----TDIDPLK 126
Query: 155 SLTLLN---LSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSG 211
+LT LN LS N+IS ++ + L LQ L+ GNQ++ P L NL L ++D+S
Sbjct: 127 NLTNLNRLELSSNTISD--ISALSGLTSLQQLNF-GNQVTDLKP--LANLTTLERLDISS 181
Query: 212 NELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEI 271
N++ S+I + NL S+ +NN+++ P IL+ NL + L+G ++I
Sbjct: 182 NKV-SDI-SVLAKLTNLESLIATNNQISDITPLGILT--------NLDELSLNGNQLKDI 231
Query: 272 GMLG---NVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVL 328
G L N+ +DL+ N +S P L +L + N+ S P LA L L L
Sbjct: 232 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNL 287
Query: 329 DLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFR 370
+L+ N+L P + NL+ L L L FNN+ + P + +
Sbjct: 288 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 107/246 (43%), Gaps = 46/246 (18%)
Query: 26 LPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVP-PGLGNLPFLKMYN--- 81
L NL NF N+ T P L NLT + I M +N + P L NL L ++N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI 119
Query: 82 ---------IGFNKIVGSGD--EGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSN 130
N++ S + +S ++ LT+ +LNF GNQ P + NL+
Sbjct: 120 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNF----GNQVTDLKP--LANLT- 172
Query: 131 VLSKLYMGGNRFYG-KIPTSIGRLRSLT--------------LLNLSYNSISGEILTEIG 175
L +L + N+ + + L SL L NL S++G L +IG
Sbjct: 173 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 232
Query: 176 QLQELQSL---DLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSID 232
L L +L DLA NQIS P L L KL ++ L N++++ P L +++
Sbjct: 233 TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 288
Query: 233 LSNNKL 238
L+ N+L
Sbjct: 289 LNENQL 294
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 39/232 (16%)
Query: 463 IGSGSFGSVYKGYLREGI-----------SVAVKVLDIEST-GTWKSFFAECEALRNT-R 509
+G G+FG V L E I VAVK+L ++T +E E ++ +
Sbjct: 21 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGL 559
H+N++ L+ +C+ L ++ E+ G+L +++ R + L
Sbjct: 78 HKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERI 619
+ + ++ A +A ++YL + +H DL N+L+ ED K+ DFGLAR I
Sbjct: 133 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD----I 185
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ T + + ++ PE + DV+SFGV+L EIFT G SP
Sbjct: 186 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 237
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 140/282 (49%), Gaps = 35/282 (12%)
Query: 95 LSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLR 154
L+ IT L N T+L + + NQ P + NL+N L+ L + N+ T I L+
Sbjct: 75 LTDITPLKNLTKLVDILMNNNQIADITP--LANLTN-LTGLTLFNNQI-----TDIDPLK 126
Query: 155 SLTLLN---LSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSG 211
+LT LN LS N+IS ++ + L LQ L+ GNQ++ P L NL L ++D+S
Sbjct: 127 NLTNLNRLELSSNTISD--ISALSGLTSLQQLNF-GNQVTDLKP--LANLTTLERLDISS 181
Query: 212 NELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEI 271
N++ S+I + NL S+ +NN+++ P IL+ NL + L+G ++I
Sbjct: 182 NKV-SDI-SVLAKLTNLESLIATNNQISDITPLGILT--------NLDELSLNGNQLKDI 231
Query: 272 GMLG---NVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVL 328
G L N+ +DL+ N +S P L +L + N+ S P LA L L L
Sbjct: 232 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNL 287
Query: 329 DLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFR 370
+L+ N+L P + NL+ L L L FNN+ + P + +
Sbjct: 288 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 148/364 (40%), Gaps = 83/364 (22%)
Query: 26 LPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVP-PGLGNLPFLKMYN--- 81
L NL NF N+ T P L NLT + I M +N + P L NL L ++N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI 119
Query: 82 ---------IGFNKIVGSGD--EGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSN 130
N++ S + +S ++ LT+ +LNF GNQ P + NL+
Sbjct: 120 TDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNF----GNQVTDLKP--LANLT- 172
Query: 131 VLSKLYMGGNRFYG-KIPTSIGRLRSLT--------------LLNLSYNSISGEILTEIG 175
L +L + N+ + + L SL L NL S++G L +IG
Sbjct: 173 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 232
Query: 176 QLQELQSL---DLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSID 232
L L +L DLA NQIS P L L KL ++ L N++++ P
Sbjct: 233 TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP------------- 277
Query: 233 LSNNKLNGNIPKEILSLSSLTTIVN--LSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGN 290
L+ LT + N L++N L+ P I L N+ + L N +S
Sbjct: 278 ----------------LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDI 319
Query: 291 LPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALR 350
P + L++L +NNK S + LA L + L N++S P L NL +
Sbjct: 320 SP--VSSLTKLQRLFFSNNKVSD--VSSLANLTNINWLSAGHNQISDLTP--LANLTRIT 373
Query: 351 SLNL 354
L L
Sbjct: 374 QLGL 377
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 463 IGSGSFGSVYKGYLRE--------GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLV 514
+G G+F ++KG RE V +KVLD +SFF + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
C D +N+ LV EF+ GSL ++ +KN+ N +N L +L +A +A A
Sbjct: 76 LNYGVCFCGD-ENI----LVQEFVKFGSLDTYL---KKNK--NCINILWKLEVAKQLAWA 125
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
+ +L E ++H ++ NILL + K G+ + L G ++ +L+
Sbjct: 126 MHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIK--LSDPGISITVLPKDILQER 180
Query: 635 IGYIPPEYGLGEKPST---AGDVYSFGVMLLEIFTG 667
I ++PPE E P A D +SFG L EI +G
Sbjct: 181 IPWVPPE--CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 33/250 (13%)
Query: 448 DELRRATGNFSHENLIGSGSFGSVY----KGYLREGISVAVKVLDIESTGTWKS---FFA 500
DE A + +G GSFG VY KG +++ V + + + + F
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 501 ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL- 559
E ++ ++V+L+ S + ++ E + G L ++ R N +
Sbjct: 72 EASVMKEFNCHHVVRLLGVVS-----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 560 ---NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
+ + + +A +IA + YL+ + VH DL N ++ ED T K+GDFG+ R +
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 183
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-----STAGDVYSFGVMLLEIFTGMSPT 671
E + KG G +P + E +T DV+SFGV+L EI T
Sbjct: 184 E---------TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 234
Query: 672 HESFAGEVSL 681
++ + E L
Sbjct: 235 YQGLSNEQVL 244
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 456 NFSHENLIGSGSFGSVYKGY-LREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHR 511
+F ++G GSF +V L A+K+L+ I E + + H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
VKL F++ E L + NG L +I + G+ R A +I
Sbjct: 98 FFVKLYFC-----FQDDEKLYFGLSYAKNGELLKYI-----RKIGSFDETCTRFYTA-EI 146
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
SAL+YLH I+H DLKP NILL+EDM ++ DFG A+ L +S + +
Sbjct: 147 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL----SPESKQARANXF 199
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + + D+++ G ++ ++ G+ P
Sbjct: 200 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 39/232 (16%)
Query: 463 IGSGSFGSVYKGYLREGI-----------SVAVKVLDIEST-GTWKSFFAECEALRNT-R 509
+G G+FG V L E I VAVK+L ++T +E E ++ +
Sbjct: 28 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----KNEHGNGLNFLERL 565
H+N++ L+ +C+ L ++ E+ G+L +++ R + + N E+L
Sbjct: 85 HKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 566 N------IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERI 619
+ A +A ++YL + +H DL N+L+ ED K+ DFGLAR I
Sbjct: 140 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD----I 192
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ T + + ++ PE + DV+SFGV+L EIFT G SP
Sbjct: 193 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEV 584
F++ +F+ +V E SL + +H RK + R I + YLHN+
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 161
Query: 585 PIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL 644
++H DLK GN+ L++DM K+GDFGLA + +E G + L G+ YI PE
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKK-----XLCGTPNYIAPEVLC 215
Query: 645 GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL-VKWVESNFPKNAQQVLDRELRQ 703
+ S D++S G +L + G P S E + +K E + P++ V +R+
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
Query: 704 LMMSSES 710
++ + +
Sbjct: 276 MLHADPT 282
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 39/232 (16%)
Query: 463 IGSGSFGSVYKGYLREGI-----------SVAVKVLDIEST-GTWKSFFAECEALRNT-R 509
+G G+FG V L E I VAVK+L ++T +E E ++ +
Sbjct: 36 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGL 559
H+N++ L+ +C+ L ++ E+ G+L +++ R + L
Sbjct: 93 HKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERI 619
+ + ++ A +A ++YL + +H DL N+L+ ED K+ DFGLAR I
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD----I 200
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ T + + ++ PE + DV+SFGV+L EIFT G SP
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 131/307 (42%), Gaps = 44/307 (14%)
Query: 459 HENLIGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWKSFFAECEALRNTR-HRNLVKL 516
E+++G G+ V L AVK+++ + F E E L + HRN+++L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
I D LV+E + GS+ IH R N LE + D+ASALD
Sbjct: 77 IEFFEEEDR-----FYLVFEKMRGGSILSHIHKRRH------FNELEASVVVQDVASALD 125
Query: 577 YLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVLK- 632
+LHN I H DLKP NIL + + K+ DF L S ++ G+ S IS+ +L
Sbjct: 126 FLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG-SGIKLNGDCSPISTPELLTP 181
Query: 633 -GSIGYIPPEY--GLGEKPS---TAGDVYSFGVMLLEIFTGMSPTHESFAGEV-SLVKWV 685
GS Y+ PE E+ S D++S GV+L + +G P F G S W
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP----FVGRCGSDCGWD 237
Query: 686 ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREAL 745
Q +L ++IQ + +SC + ++ +R+A
Sbjct: 238 RGEACPACQNML------------FESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAK 285
Query: 746 RRLKNAQ 752
+RL AQ
Sbjct: 286 QRLSAAQ 292
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 139/282 (49%), Gaps = 35/282 (12%)
Query: 95 LSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLR 154
L+ IT L N T+L + + NQ P + NL+N L+ L + N+ T I L+
Sbjct: 80 LTDITPLKNLTKLVDILMNNNQIADITP--LANLTN-LTGLTLFNNQI-----TDIDPLK 131
Query: 155 SLTLLN---LSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSG 211
+LT LN LS N+IS ++ + L LQ L GNQ++ P L NL L ++D+S
Sbjct: 132 NLTNLNRLELSSNTISD--ISALSGLTSLQQLSF-GNQVTDLKP--LANLTTLERLDISS 186
Query: 212 NELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEI 271
N++ S+I + NL S+ +NN+++ P IL+ NL + L+G ++I
Sbjct: 187 NKV-SDI-SVLAKLTNLESLIATNNQISDITPLGILT--------NLDELSLNGNQLKDI 236
Query: 272 GMLG---NVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVL 328
G L N+ +DL+ N +S P L +L + N+ S P LA L L L
Sbjct: 237 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNL 292
Query: 329 DLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFR 370
+L+ N+L P + NL+ L L L FNN+ + P + +
Sbjct: 293 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 332
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 108/244 (44%), Gaps = 42/244 (17%)
Query: 26 LPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVP-PGLGNLPFLKMYN--- 81
L NL NF N+ T P L NLT + I M +N + P L NL L ++N
Sbjct: 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI 124
Query: 82 ---------IGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVL 132
N++ S + +S I++L+ T L L+F GNQ P + NL+ L
Sbjct: 125 TDIDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQLSF-GNQVTDLKP--LANLT-TL 179
Query: 133 SKLYMGGNRFYG-KIPTSIGRLRSLT--------------LLNLSYNSISGEILTEIGQL 177
+L + N+ + + L SL L NL S++G L +IG L
Sbjct: 180 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTL 239
Query: 178 QELQSL---DLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLS 234
L +L DLA NQIS P L L KL ++ L N++++ P L +++L+
Sbjct: 240 ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELN 295
Query: 235 NNKL 238
N+L
Sbjct: 296 ENQL 299
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 119/269 (44%), Gaps = 31/269 (11%)
Query: 423 IVRKGKAKPIGVSTLFKHSPQMISYDELRRATGNFSHENLI------GSGSFGSVYKGYL 476
I K +P+ + T SP +EL+ +NL+ G G+FGSV +G
Sbjct: 299 ITSPDKPRPMPMDTSVFESP-FSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVY 357
Query: 477 R---EGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531
R + I VA+KVL E T + E + + + +V+LI C + E L
Sbjct: 358 RMRKKQIDVAIKVLKQGTEKADT-EEMMREAQIMHQLDNPYIVRLIGVCQA------EAL 410
Query: 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDL 591
LV E G G L ++ G+R E N E L+ ++ + YL E VH +L
Sbjct: 411 MLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLH---QVSMGMKYLE---EKNFVHRNL 462
Query: 592 KPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTA 651
N+LL AK+ DFGL+++L + S ++ K + + PE K S+
Sbjct: 463 AARNVLLVNRHYAKISDFGLSKAL---GADDSYYTARSAGKWPLKWYAPECINFRKFSSR 519
Query: 652 GDVYSFGVMLLEIFT-GMSPTHESFAGEV 679
DV+S+GV + E + G P + EV
Sbjct: 520 SDVWSYGVTMWEALSYGQKPYKKMKGPEV 548
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 21/219 (9%)
Query: 453 ATGNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIE--STGTWKSFFAECEALRNTR 509
AT + IG G++G+VYK G VA+K + + G S E LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 510 ---HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN 566
H N+V+L+ C++ + LV+E + + L ++ GL +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL----DKAPPPGLPAETIKD 116
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSIS 626
+ LD+LH +C IVH DLKP NIL+ T K+ DFGLAR Q +++
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALA 169
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIF 665
V ++ Y PE L +T D++S G + E+F
Sbjct: 170 PVVV---TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 139/282 (49%), Gaps = 35/282 (12%)
Query: 95 LSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLR 154
L+ IT L N T+L + + NQ P + NL+N L+ L + N+ T I L+
Sbjct: 79 LTDITPLKNLTKLVDILMNNNQIADITP--LANLTN-LTGLTLFNNQI-----TDIDPLK 130
Query: 155 SLTLLN---LSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSG 211
+LT LN LS N+IS ++ + L LQ L GNQ++ P L NL L ++D+S
Sbjct: 131 NLTNLNRLELSSNTISD--ISALSGLTSLQQLSF-GNQVTDLKP--LANLTTLERLDISS 185
Query: 212 NELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEI 271
N++ S+I + NL S+ +NN+++ P IL+ NL + L+G ++I
Sbjct: 186 NKV-SDI-SVLAKLTNLESLIATNNQISDITPLGILT--------NLDELSLNGNQLKDI 235
Query: 272 GMLG---NVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVL 328
G L N+ +DL+ N +S P L +L + N+ S P LA L L L
Sbjct: 236 GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNL 291
Query: 329 DLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFR 370
+L+ N+L P + NL+ L L L FNN+ + P + +
Sbjct: 292 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTK 331
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 149/362 (41%), Gaps = 79/362 (21%)
Query: 26 LPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVP-PGLGNLPFLKMYN--- 81
L NL NF N+ T P L NLT + I M +N + P L NL L ++N
Sbjct: 66 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQI 123
Query: 82 ---------IGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVL 132
N++ S + +S I++L+ T L L+F GNQ P + NL+ L
Sbjct: 124 TDIDPLKNLTNLNRLELSSNT-ISDISALSGLTSLQQLSF-GNQVTDLKP--LANLT-TL 178
Query: 133 SKLYMGGNRFYG-KIPTSIGRLRSLT--------------LLNLSYNSISGEILTEIGQL 177
+L + N+ + + L SL L NL S++G L +IG L
Sbjct: 179 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTL 238
Query: 178 QELQSL---DLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLS 234
L +L DLA NQIS P L L KL ++ L N++++ P
Sbjct: 239 ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--------------- 281
Query: 235 NNKLNGNIPKEILSLSSLTTIVN--LSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLP 292
L+ LT + N L++N L+ P I L N+ + L N +S P
Sbjct: 282 --------------LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 325
Query: 293 NSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSL 352
+ L++L ANNK S + LA L + L N++S P L NL + L
Sbjct: 326 --VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQL 379
Query: 353 NL 354
L
Sbjct: 380 GL 381
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 80 NPHVCRLLGICLT------STVQLIMQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 128
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFG A+ L G +
Sbjct: 129 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL----GAEEKEYHAE 181
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 182 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 78 NPHVCRLLGICLT------STVQLIMQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 126
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFG A+ L G +
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL----GAEEKEYHAE 179
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 78 NPHVCRLLGICLT------STVQLIMQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 126
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFG A+ L G +
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL----GAEEKEYHAE 179
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L D++ G L ++ + +
Sbjct: 64 IVKL------LDVIHTENKLYLVFEFL-HQDLKDFMDASALT--GIPLPLIK--SYLFQL 112
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 165
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 16/224 (7%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITS 519
IG+GS+G K + +G + K LD S + +E LR +H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
+D N L +V E+ G L I K F+ R+ + +A +
Sbjct: 74 I--IDRTNTT-LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+D ++H DLKP N+ LD K+GDFGLAR L + +S + V G+ Y+
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL----NHDTSFAKAFV--GTPYYMS 184
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEV 679
PE + D++S G +L E+ M P + + AG++
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEV 584
F++ +F+ +V E SL + +H RK + R I + YLHN+
Sbjct: 95 FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 145
Query: 585 PIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL 644
++H DLK GN+ L++DM K+GDFGLA + +E G + L G+ YI PE
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKKD-----LCGTPNYIAPEVLC 199
Query: 645 GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL-VKWVESNFPKNAQQVLDRELRQ 703
+ S D++S G +L + G P S E + +K E + P++ V +R+
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 259
Query: 704 LMMSSES 710
++ + +
Sbjct: 260 MLHADPT 266
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++ SG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 83 NPHVCRLLGICLT------STVQLIMQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 131
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 132 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 184
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 76 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 124
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFG A+ L G +
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL----GAEEKEYHAE 177
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L D++ G L ++ + +
Sbjct: 66 IVKL------LDVIHTENKLYLVFEFL-SMDLKDFMDASALT--GIPLPLIK--SYLFQL 114
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 167
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L D++ G L ++ + +
Sbjct: 67 IVKL------LDVIHTENKLYLVFEFL-SMDLKDFMDASALT--GIPLPLIK--SYLFQL 115
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 168
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 78 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 126
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFG A+ L G +
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL----GAEEKEYHAE 179
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 180 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 32/219 (14%)
Query: 461 NLIGSGSFGSVYKGYLREGIS-------VAVKVLDIESTGTWKSFFAECEA--LRNTRHR 511
++G GSFG V+ L + IS A+KVL + + E L H
Sbjct: 30 KVLGQGSFGKVF---LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHP 86
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL + F+ L L+ +FL G L + E + +L L
Sbjct: 87 FIVKLHYA-----FQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL------ 135
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A ALD+LH+ + I++ DLKP NILLDE+ K+ DFGL++ E I ++ S
Sbjct: 136 ALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYS---F 186
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G++ Y+ PE + + D +SFGV++ E+ TG P
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEV 584
F++ +F+ +V E SL + +H RK + R I + YLHN+
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 161
Query: 585 PIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL 644
++H DLK GN+ L++DM K+GDFGLA + +E G + L G+ YI PE
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLA-TKIEFDGERKKD-----LCGTPNYIAPEVLC 215
Query: 645 GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL-VKWVESNFPKNAQQVLDRELRQ 703
+ S D++S G +L + G P S E + +K E + P++ V +R+
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRR 275
Query: 704 LMMSSES 710
++ + +
Sbjct: 276 MLHADPT 282
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++GSG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 83 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 131
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFG A+ L G +
Sbjct: 132 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL----GAEEKEYHAE 184
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++ SG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 76 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 124
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 177
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 178 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 71 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 119
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+
Sbjct: 120 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYTHEVV 172
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 173 --TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 21/219 (9%)
Query: 453 ATGNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIE--STGTWKSFFAECEALRNTR 509
AT + IG G++G+VYK G VA+K + + G S E LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 510 ---HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN 566
H N+V+L+ C++ + LV+E + + L ++ GL +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL----DKAPPPGLPAETIKD 116
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSIS 626
+ LD+LH +C IVH DLKP NIL+ T K+ DFGLAR Q ++
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALD 169
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIF 665
V ++ Y PE L +T D++S G + E+F
Sbjct: 170 PVVV---TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 64 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 112
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYTHEVV 165
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 166 --TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 32/219 (14%)
Query: 461 NLIGSGSFGSVYKGYLREGIS-------VAVKVLDIESTGTWKSFFAECEA--LRNTRHR 511
++G GSFG V+ L + IS A+KVL + + E L H
Sbjct: 31 KVLGQGSFGKVF---LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHP 87
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL + F+ L L+ +FL G L + E + +L L
Sbjct: 88 FIVKLHYA-----FQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL------ 136
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A ALD+LH+ + I++ DLKP NILLDE+ K+ DFGL++ E I ++ S
Sbjct: 137 ALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYS---F 187
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G++ Y+ PE + + D +SFGV++ E+ TG P
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 32/219 (14%)
Query: 461 NLIGSGSFGSVYKGYLREGIS-------VAVKVLDIESTGTWKSFFAECEA--LRNTRHR 511
++G GSFG V+ L + IS A+KVL + + E L H
Sbjct: 30 KVLGQGSFGKVF---LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHP 86
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL + F+ L L+ +FL G L + E + +L ++
Sbjct: 87 FIVKLHYA-----FQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL------AEL 135
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
A ALD+LH+ + I++ DLKP NILLDE+ K+ DFGL++ E I ++ S
Sbjct: 136 ALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYS---F 186
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G++ Y+ PE + + D +SFGV++ E+ TG P
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 456 NFSHENLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTR 509
F ++ SG+FG+VYKG ++ EG I VA+K L + S K E + +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
+ ++ +L+ C + + L+ + + G L D++ EH + + LN +
Sbjct: 83 NPHVCRLLGICLT------STVQLITQLMPFGCLLDYV-----REHKDNIGSQYLLNWCV 131
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
IA ++YL + +VH DL N+L+ K+ DFGLA+ L G +
Sbjct: 132 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAE 184
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
K I ++ E L + DV+S+GV + E+ T G P A E+S
Sbjct: 185 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 92/215 (42%), Gaps = 32/215 (14%)
Query: 463 IGSGSFGSVYKGYLRE------GISVAVKVLDIESTGT-----WKSFFAECEALRNTRHR 511
+G G FG V Y + G VAVK L E G W+ E E LR H
Sbjct: 16 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQR---EIEILRTLYHE 70
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
++VK C K+++ LV E++ GSL D++ H GL L L A I
Sbjct: 71 HIVKYKGCCEDQGEKSVQ---LVMEYVPLGSLRDYL-----PRHCVGLAQL--LLFAQQI 120
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ YLH +H L N+LLD D K+GDFGLA+++ E
Sbjct: 121 CEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE---GHEYYRVREDG 174
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
+ + PE K A DV+SFGV L E+ T
Sbjct: 175 DSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 92/215 (42%), Gaps = 32/215 (14%)
Query: 463 IGSGSFGSVYKGYLRE------GISVAVKVLDIESTGT-----WKSFFAECEALRNTRHR 511
+G G FG V Y + G VAVK L E G W+ E E LR H
Sbjct: 17 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQR---EIEILRTLYHE 71
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
++VK C K+++ LV E++ GSL D++ H GL L L A I
Sbjct: 72 HIVKYKGCCEDQGEKSVQ---LVMEYVPLGSLRDYL-----PRHCVGLAQL--LLFAQQI 121
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ YLH +H L N+LLD D K+GDFGLA+++ E
Sbjct: 122 CEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE---GHEYYRVREDG 175
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
+ + PE K A DV+SFGV L E+ T
Sbjct: 176 DSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDI-----ESTGTWKSFFAECEALRNTRHRNLVKLI 517
+GSG+FG+V KGY + V + I AE ++ + +V++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C + E LV E G L ++ ++N H N +E ++ ++ + Y
Sbjct: 79 GICEA------ESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVH---QVSMGMKY 126
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L E VH DL N+LL AK+ DFGL+++L R + TH K + +
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENXYKAQTHG-KWPVKW 180
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
PE K S+ DV+SFGV++ E F+ G P EV+
Sbjct: 181 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 53/250 (21%)
Query: 457 FSHENL-----IGSGSFGSVYK----GYLREGIS--VAVKVLDIESTGTWK-SFFAECEA 504
F ENL +GSG+FG V G + G+S VAVK+L ++ + + + +E +
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101
Query: 505 LRNT-RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN---------- 553
+ H N+V L+ +C+ + L++E+ G L +++ +R+
Sbjct: 102 MTQLGSHENIVNLLGACTLSGP-----IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 156
Query: 554 -------EHGNGLNFLERLNIAIDIASALDYLH-NDCEVPIVHCDLKPGNILLDEDMTAK 605
E N L F + L A +A +++L C VH DL N+L+ K
Sbjct: 157 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVK 212
Query: 606 VGDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVML 661
+ DFGLAR ++ S +V++G+ + ++ PE + DV+S+G++L
Sbjct: 213 ICDFGLARDIMS--------DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL 264
Query: 662 LEIFT-GMSP 670
EIF+ G++P
Sbjct: 265 WEIFSLGVNP 274
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 64 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 112
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+
Sbjct: 113 LQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYTHEVV 165
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 24/224 (10%)
Query: 463 IGSGSFGSVYKGYLR---EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLI 517
+GSG+FG+V KGY + +VAVK+L E+ AE ++ + +V++I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C + E LV E G L ++ ++N H N +E ++ ++ + Y
Sbjct: 73 GICEA------ESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVH---QVSMGMKY 120
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L E VH DL N+LL AK+ DFGL+++L R + TH K + +
Sbjct: 121 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHG-KWPVKW 174
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
PE K S+ DV+SFGV++ E F+ G P EV+
Sbjct: 175 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 218
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDI-----ESTGTWKSFFAECEALRNTRHRNLVKLI 517
+GSG+FG+V KGY + V + I AE ++ + +V++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C + E LV E G L ++ ++N H N +E ++ ++ + Y
Sbjct: 79 GICEA------ESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVH---QVSMGMKY 126
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L E VH DL N+LL AK+ DFGL+++L R + TH K + +
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHG-KWPVKW 180
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
PE K S+ DV+SFGV++ E F+ G P EV+
Sbjct: 181 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDI-----ESTGTWKSFFAECEALRNTRHRNLVKLI 517
+GSG+FG+V KGY + V + I AE ++ + +V++I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C + E LV E G L ++ ++N H N +E ++ ++ + Y
Sbjct: 75 GICEA------ESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVH---QVSMGMKY 122
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L E VH DL N+LL AK+ DFGL+++L R + TH K + +
Sbjct: 123 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHG-KWPVKW 176
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
PE K S+ DV+SFGV++ E F+ G P EV+
Sbjct: 177 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDI-----ESTGTWKSFFAECEALRNTRHRNLVKLI 517
+GSG+FG+V KGY + V + I AE ++ + +V++I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C + E LV E G L ++ ++N H N +E ++ ++ + Y
Sbjct: 85 GICEA------ESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVH---QVSMGMKY 132
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L E VH DL N+LL AK+ DFGL+++L R + TH K + +
Sbjct: 133 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHG-KWPVKW 186
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
PE K S+ DV+SFGV++ E F+ G P EV+
Sbjct: 187 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDI-----ESTGTWKSFFAECEALRNTRHRNLVKLI 517
+GSG+FG+V KGY + V + I AE ++ + +V++I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C + E LV E G L ++ ++N H N +E ++ ++ + Y
Sbjct: 93 GICEA------ESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVH---QVSMGMKY 140
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L E VH DL N+LL AK+ DFGL+++L R + TH K + +
Sbjct: 141 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHG-KWPVKW 194
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
PE K S+ DV+SFGV++ E F+ G P EV+
Sbjct: 195 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 238
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 110/252 (43%), Gaps = 35/252 (13%)
Query: 452 RATGN-FSHENLIGSGSFGSVYKGYLRE---GISVAVKVLDIE---STGTWKSFFAECEA 504
R T N F + L+G G+FG V ++E G A+K+L E + E
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 201
Query: 505 LRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER 564
L+N+RH L L S F+ + L V E+ G L + ER +
Sbjct: 202 LQNSRHPFLTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY--- 253
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+I SALDYLH+ E +V+ DLK N++LD+D K+ DFGL + E I + ++
Sbjct: 254 ---GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGAT 305
Query: 625 ISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVS 680
+ + G+ Y+ PE A D + GV++ E+ G P HE
Sbjct: 306 MKT---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FE 359
Query: 681 LVKWVESNFPKN 692
L+ E FP+
Sbjct: 360 LILMEEIRFPRT 371
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 28/226 (12%)
Query: 452 RATGN-FSHENLIGSGSFGSVYKGYLRE---GISVAVKVLDIE---STGTWKSFFAECEA 504
R T N F + L+G G+FG V ++E G A+K+L E + E
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 204
Query: 505 LRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER 564
L+N+RH L L S F+ + L V E+ G L + ER +
Sbjct: 205 LQNSRHPFLTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY--- 256
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+I SALDYLH+ E +V+ DLK N++LD+D K+ DFGL + E I + ++
Sbjct: 257 ---GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGAT 308
Query: 625 ISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ + G+ Y+ PE A D + GV++ E+ G P
Sbjct: 309 MKT---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 71 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 119
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+
Sbjct: 120 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYTHEVV 172
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 173 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLV 514
+FS +IG G FG VY + G A+K LD + + E AL R ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ---GETLALNE---RIML 243
Query: 515 KLITS-------CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI 567
L+++ C S F + L+ + + + G L + ++HG R
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRF-Y 297
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISS 627
A +I L+++HN +V+ DLKP NILLDE ++ D GLA S
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF--------SKKK 346
Query: 628 THVLKGSIGYIPPEY-GLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
H G+ GY+ PE G ++ D +S G ML ++ G SP
Sbjct: 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 65 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 113
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYTHEVV 166
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEV 584
F++ +F+ +V E SL + +H RK L E I YLH +
Sbjct: 108 FEDNDFVFVVLELCRRRSLLE-LHKRRK-----ALTEPEARYYLRQIVLGCQYLHRN--- 158
Query: 585 PIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL 644
++H DLK GN+ L+ED+ K+GDFGLA + +E G + VL G+ YI PE
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKK-----VLCGTPNYIAPEVLS 212
Query: 645 GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL-VKWVESNFPKNAQQVLDRELRQ 703
+ S DV+S G ++ + G P S E L +K E + PK+ V +++
Sbjct: 213 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 272
Query: 704 LMMSSESQTIQLHDCL 719
++ + + +++ L
Sbjct: 273 MLQTDPTARPTINELL 288
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 64 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 112
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYTHEVV 165
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLV 514
+FS +IG G FG VY + G A+K LD + + E AL R ++
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ---GETLALNE---RIML 242
Query: 515 KLITS-------CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI 567
L+++ C S F + L+ + + + G L + ++HG R
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRF-Y 296
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISS 627
A +I L+++HN +V+ DLKP NILLDE ++ D GLA S
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF--------SKKK 345
Query: 628 THVLKGSIGYIPPEY-GLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
H G+ GY+ PE G ++ D +S G ML ++ G SP
Sbjct: 346 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 16/187 (8%)
Query: 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEV 584
F++ +F+ +V E SL + +H RK L E I YLH +
Sbjct: 84 FEDNDFVFVVLELCRRRSLLE-LHKRRK-----ALTEPEARYYLRQIVLGCQYLHRN--- 134
Query: 585 PIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL 644
++H DLK GN+ L+ED+ K+GDFGLA + +E G + VL G+ YI PE
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKK-----VLCGTPNYIAPEVLS 188
Query: 645 GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL-VKWVESNFPKNAQQVLDRELRQ 703
+ S DV+S G ++ + G P S E L +K E + PK+ V +++
Sbjct: 189 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 248
Query: 704 LMMSSES 710
++ + +
Sbjct: 249 MLQTDPT 255
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 64 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 112
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYTHEVV 165
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 110/254 (43%), Gaps = 35/254 (13%)
Query: 450 LRRATGN-FSHENLIGSGSFGSVYKGYLRE---GISVAVKVLDIE---STGTWKSFFAEC 502
+ R T N F + L+G G+FG V ++E G A+K+L E + E
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 60
Query: 503 EALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFL 562
L+N+RH L L S F+ + L V E+ G L + ER +
Sbjct: 61 RVLQNSRHPFLTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY- 114
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+I SALDYLH+ E +V+ DLK N++LD+D K+ DFGL + E I +
Sbjct: 115 -----GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDG 164
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGE 678
+++ G+ Y+ PE A D + GV++ E+ G P HE
Sbjct: 165 ATMKX---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL--- 218
Query: 679 VSLVKWVESNFPKN 692
L+ E FP+
Sbjct: 219 FELILMEEIRFPRT 232
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 63 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 111
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYTHEVV 164
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 165 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEV 584
F++ +F+ +V E SL + +H RK L E I YLH +
Sbjct: 110 FEDNDFVFVVLELCRRRSLLE-LHKRRK-----ALTEPEARYYLRQIVLGCQYLHRN--- 160
Query: 585 PIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL 644
++H DLK GN+ L+ED+ K+GDFGLA + +E G + VL G+ YI PE
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKK-----VLCGTPNYIAPEVLS 214
Query: 645 GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL-VKWVESNFPKNAQQVLDRELRQ 703
+ S DV+S G ++ + G P S E L +K E + PK+ V +++
Sbjct: 215 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 274
Query: 704 LMMSSESQTIQLHDCL 719
++ + + +++ L
Sbjct: 275 MLQTDPTARPTINELL 290
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 68 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 116
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+
Sbjct: 117 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYTHEVV 169
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 170 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 39/232 (16%)
Query: 463 IGSGSFGSVYKGYLREGI-----------SVAVKVLDIEST-GTWKSFFAECEALRNT-R 509
+G G+FG V L E I VAVK+L ++T +E E ++ +
Sbjct: 36 LGEGAFGQVV---LAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----KNEHGNGLNFLERL 565
H+N++ L+ +C+ L ++ E+ G+L +++ + + N E+L
Sbjct: 93 HKNIINLLGACTQDGP-----LYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 566 N------IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERI 619
+ A +A ++YL + +H DL N+L+ ED K+ DFGLAR I
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARD----I 200
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ T + + ++ PE + DV+SFGV+L EIFT G SP
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 21/219 (9%)
Query: 453 ATGNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIE--STGTWKSFFAECEALRNTR 509
AT + IG G++G+VYK G VA+K + + G S E LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 510 ---HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN 566
H N+V+L+ C++ + LV+E + + L ++ GL +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL----DKAPPPGLPAETIKD 116
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSIS 626
+ LD+LH +C IVH DLKP NIL+ T K+ DFGLAR Q ++
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY----SYQMALF 169
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIF 665
V ++ Y PE L +T D++S G + E+F
Sbjct: 170 PVVV---TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 63 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 111
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYTHEVV 164
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 165 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 35/252 (13%)
Query: 452 RATGN-FSHENLIGSGSFGSVYKGYLRE---GISVAVKVLDIE---STGTWKSFFAECEA 504
R T N F + L+G G+FG V ++E G A+K+L E + E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 61
Query: 505 LRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER 564
L+N+RH L L S F+ + L V E+ G L + ER +
Sbjct: 62 LQNSRHPFLTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY--- 113
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+I SALDYLH+ E +V+ DLK N++LD+D K+ DFGL + E I + ++
Sbjct: 114 ---GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGAT 165
Query: 625 ISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVS 680
+ G+ Y+ PE A D + GV++ E+ G P HE
Sbjct: 166 MKX---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FE 219
Query: 681 LVKWVESNFPKN 692
L+ E FP+
Sbjct: 220 LILMEEIRFPRT 231
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDI-----ESTGTWKSFFAECEALRNTRHRNLVKLI 517
+GSG+FG+V KGY + V + I AE ++ + +V++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C + E LV E G L ++ ++N H N +E ++ ++ + Y
Sbjct: 95 GICEA------ESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVH---QVSMGMKY 142
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L E VH DL N+LL AK+ DFGL+++L R + TH K + +
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHG-KWPVKW 196
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
PE K S+ DV+SFGV++ E F+ G P EV+
Sbjct: 197 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDI-----ESTGTWKSFFAECEALRNTRHRNLVKLI 517
+GSG+FG+V KGY + V + I AE ++ + +V++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C + E LV E G L ++ ++N H N +E ++ ++ + Y
Sbjct: 95 GICEA------ESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVH---QVSMGMKY 142
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L E VH DL N+LL AK+ DFGL+++L R + TH K + +
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHG-KWPVKW 196
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680
PE K S+ DV+SFGV++ E F+ G P EV+
Sbjct: 197 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLV 514
+FS +IG G FG VY + G A+K LD + + E AL R ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ---GETLALNE---RIML 243
Query: 515 KLITS-------CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI 567
L+++ C S F + L+ + + + G L + ++HG R
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRF-Y 297
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISS 627
A +I L+++HN +V+ DLKP NILLDE ++ D GLA S
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF--------SKKK 346
Query: 628 THVLKGSIGYIPPEY-GLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
H G+ GY+ PE G ++ D +S G ML ++ G SP
Sbjct: 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLV 514
+FS +IG G FG VY + G A+K LD + + E AL R ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ---GETLALNE---RIML 243
Query: 515 KLITS-------CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI 567
L+++ C S F + L+ + + + G L + ++HG R
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRF-Y 297
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISS 627
A +I L+++HN +V+ DLKP NILLDE ++ D GLA S
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF--------SKKK 346
Query: 628 THVLKGSIGYIPPEY-GLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
H G+ GY+ PE G ++ D +S G ML ++ G SP
Sbjct: 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 35/252 (13%)
Query: 452 RATGN-FSHENLIGSGSFGSVYKGYLRE---GISVAVKVLDIE---STGTWKSFFAECEA 504
R T N F + L+G G+FG V ++E G A+K+L E + E
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 63
Query: 505 LRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER 564
L+N+RH L L S F+ + L V E+ G L + ER +
Sbjct: 64 LQNSRHPFLTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY--- 115
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+I SALDYLH+ E +V+ DLK N++LD+D K+ DFGL + E I + ++
Sbjct: 116 ---GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGAT 167
Query: 625 ISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVS 680
+ G+ Y+ PE A D + GV++ E+ G P HE
Sbjct: 168 MKX---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---FE 221
Query: 681 LVKWVESNFPKN 692
L+ E FP+
Sbjct: 222 LILMEEIRFPRT 233
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 463 IGSGSFGSVYKGYL-REGISVAVKVL--DIESTGTWKSFFAECEALRNTRHRNLVKLI-- 517
+GSG++G+V R G VA+K L +S K + E L++ RH N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 518 -TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
T +LD + LV F+G LG + E+ E + + FL + L
Sbjct: 93 FTPDETLD--DFTDFYLVMPFMGT-DLGKLMKHEKLGE--DRIQFL-----VYQMLKGLR 142
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y+H I+H DLKPGN+ ++ED K+ DFGLAR S + V +
Sbjct: 143 YIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQ------ADSEMXGXVVTR---W 190
Query: 637 YIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMS 669
Y PE L T D++S G ++ E+ TG +
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 461 NLIGSGSFGSVY--KGYLR--EGISVAVKVLDIESTGTWKSFFAECEA--LRNTRHRNLV 514
++G GSFG V+ + R G A+KVL + + E L + H +V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
KL + F+ L L+ +FL G L + E + +L L A
Sbjct: 94 KLHYA-----FQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL------ALG 142
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
LD+LH+ + I++ DLKP NILLDE+ K+ DFGL++ ++ S G+
Sbjct: 143 LDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC------GT 193
Query: 635 IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ Y+ PE + S + D +S+GV++ E+ TG P
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 118/249 (47%), Gaps = 36/249 (14%)
Query: 441 SPQMISYDE-LRRATGNFSHENLIGSGSFGSVYK------GYLREGISVAVKVLDIESTG 493
P + Y+E N +G+G+FG V + G + VAVK+L +
Sbjct: 23 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 82
Query: 494 TWK-SFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--- 548
K + +E + + + +H N+V L+ +C+ + + ++ E+ G L +++
Sbjct: 83 DEKEALMSELKIMSHLGQHENIVNLLGACT-----HGGPVLVITEYCCYGDLLNFLRRKA 137
Query: 549 -GERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGNILLDEDMTAKV 606
+ E G L + L+ + +A + +L + +C +H D+ N+LL AK+
Sbjct: 138 EADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKI 193
Query: 607 GDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLL 662
GDFGLAR ++ S +++KG+ + ++ PE + DV+S+G++L
Sbjct: 194 GDFGLARDIMN--------DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 245
Query: 663 EIFT-GMSP 670
EIF+ G++P
Sbjct: 246 EIFSLGLNP 254
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
+G G+FG VYK +E G A KV++ +S + + E E L H +VKL+ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA-- 84
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
+ + L ++ EF G++ + E GL + + + AL++LH+
Sbjct: 85 ---YYHDGKLWIMIEFCPGGAVDAIML-----ELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
I+H DLK GN+L+ + ++ DFG++ L+ + + S G+ ++ PE
Sbjct: 137 ---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPE 187
Query: 642 YGLGEKPSTA-----GDVYSFGVMLLEIFTGMSPTHE 673
+ E D++S G+ L+E+ P HE
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 224
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 453 ATGNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWK-----SFFAECEALR 506
AT + IG G++G+VYK G VA+K + + + G S E LR
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 507 NTR---HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLE 563
H N+V+L+ C++ + LV+E + + L ++ GL
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL----DKAPPPGLPAET 121
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
++ LD+LH +C IVH DLKP NIL+ T K+ DFGLAR Q
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY----SYQM 174
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIF 665
+++ V ++ Y PE L +T D++S G + E+F
Sbjct: 175 ALTPVVV---TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F IG+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ KV DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 25/217 (11%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
+G G+FG VYK +E G A KV++ +S + + E E L H +VKL+ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA-- 76
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
+ + L ++ EF G++ D I E GL + + + AL++LH+
Sbjct: 77 ---YYHDGKLWIMIEFCPGGAV-DAIMLEL----DRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
I+H DLK GN+L+ + ++ DFG++ L+ + + S G+ ++ PE
Sbjct: 129 ---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPE 179
Query: 642 YGLGEKPSTA-----GDVYSFGVMLLEIFTGMSPTHE 673
+ E D++S G+ L+E+ P HE
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 216
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR---EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + E +++ LD E+ G + E L+ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 64 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 112
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYTHEVV 165
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR---EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + E +++ LD E+ G + E L+ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 63 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 111
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYTHEVV 164
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 165 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
IG G+ G+VY + G VA++ ++++ + E +R ++ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 85
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
+ + L +V E+L GSL D + +E + + + AL++LH++
Sbjct: 86 ---YLVGDELWVVMEYLAGGSLTDVVTETCMDEG-------QIAAVCRECLQALEFLHSN 135
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
++H D+K NILL D + K+ DFG +I + S ST V G+ ++ PE
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFC----AQITPEQSKRSTMV--GTPYWMAPE 186
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ D++S G+M +E+ G P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F IG+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ KV DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDI-----ESTGTWKSFFAECEALRNTRHRNLVKLI 517
+GSG+FG+V KGY + V + I AE ++ + +V++I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C + E LV E G L ++ ++N H N +E ++ ++ + Y
Sbjct: 437 GICEA------ESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVH---QVSMGMKY 484
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L E VH DL N+LL AK+ DFGL+++L R + TH K + +
Sbjct: 485 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHG-KWPVKW 538
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLV 682
PE K S+ DV+SFGV++ E F+ G P EV+ +
Sbjct: 539 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 584
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 26/233 (11%)
Query: 463 IGSGSFG-SVYKGYLREGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITS 519
IG GSFG ++ +G +K ++I S+ + E L N +H N+V+ S
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER--LNIAIDIASALDY 577
F+ L +V ++ G L I+ ++ G+ F E L+ + I AL +
Sbjct: 92 -----FEENGSLYIVMDYCEGGDLFKRINAQK------GVLFQEDQILDWFVQICLALKH 140
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
+H+ I+H D+K NI L +D T ++GDFG+AR L S++ G+ Y
Sbjct: 141 VHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL------NSTVELARACIGTPYY 191
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP 690
+ PE + + D+++ G +L E+ T + E+ + + ++K + +FP
Sbjct: 192 LSPEICENKPYNNKSDIWALGCVLYELCT-LKHAFEAGSMKNLVLKIISGSFP 243
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 460 ENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECE------ALRNTRHRN 512
++LIG GSFG V K Y R E VA+K++ + K+F + + L N +H
Sbjct: 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMN-KHDT 112
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+K F L LV+E L +L D + N G LN + A +
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNT--NFRGVSLNLTRKF--AQQMC 167
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILL--DEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
+AL +L E+ I+HCDLKP NILL + K+ DFG + L +RI I S
Sbjct: 168 TALLFLATP-ELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRI--YQXIQSRF- 223
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
Y PE LG A D++S G +L+E+ TG
Sbjct: 224 ------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 118/249 (47%), Gaps = 36/249 (14%)
Query: 441 SPQMISYDE-LRRATGNFSHENLIGSGSFGSVYK------GYLREGISVAVKVLDIESTG 493
P + Y+E N +G+G+FG V + G + VAVK+L +
Sbjct: 31 DPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 494 TWK-SFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--- 548
K + +E + + + +H N+V L+ +C+ + + ++ E+ G L +++
Sbjct: 91 DEKEALMSELKIMSHLGQHENIVNLLGACT-----HGGPVLVITEYCCYGDLLNFLRRKA 145
Query: 549 -GERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGNILLDEDMTAKV 606
+ E G L + L+ + +A + +L + +C +H D+ N+LL AK+
Sbjct: 146 EADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKI 201
Query: 607 GDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLL 662
GDFGLAR ++ S +++KG+ + ++ PE + DV+S+G++L
Sbjct: 202 GDFGLARDIMN--------DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 253
Query: 663 EIFT-GMSP 670
EIF+ G++P
Sbjct: 254 EIFSLGLNP 262
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 64 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 112
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 165
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDI-----ESTGTWKSFFAECEALRNTRHRNLVKLI 517
+GSG+FG+V KGY + V + I AE ++ + +V++I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
C + E LV E G L ++ ++N H N +E ++ ++ + Y
Sbjct: 438 GICEA------ESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVH---QVSMGMKY 485
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L E VH DL N+LL AK+ DFGL+++L R + TH K + +
Sbjct: 486 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL--RADENYYKAQTHG-KWPVKW 539
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLV 682
PE K S+ DV+SFGV++ E F+ G P EV+ +
Sbjct: 540 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 585
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 67 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 115
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 168
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 66 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 114
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 167
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 64 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 112
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 165
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 37/248 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE---GISVAVKVLDIE---STGTWKSFFAECEALRNTR 509
+F + L+G G+FG V +RE G A+K+L E + E L+NTR
Sbjct: 6 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI-A 568
H L L + F+ + L V E+ G L + H R+ ER
Sbjct: 64 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTE-----ERARFYG 111
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+I SAL+YLH+ +V+ D+K N++LD+D K+ DFGL + E I + +++ +
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKT- 164
Query: 629 HVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW 684
G+ Y+ PE A D + GV++ E+ G P HE L+
Sbjct: 165 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILM 219
Query: 685 VESNFPKN 692
E FP+
Sbjct: 220 EEIRFPRT 227
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 67 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 115
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 168
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 65 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 113
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 166
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 63 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 111
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 164
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 165 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 37/248 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE---GISVAVKVLDIE---STGTWKSFFAECEALRNTR 509
+F + L+G G+FG V +RE G A+K+L E + E L+NTR
Sbjct: 9 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI-A 568
H L L + F+ + L V E+ G L + H R+ ER
Sbjct: 67 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTE-----ERARFYG 114
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+I SAL+YLH+ +V+ D+K N++LD+D K+ DFGL + E I + +++ +
Sbjct: 115 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKT- 167
Query: 629 HVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW 684
G+ Y+ PE A D + GV++ E+ G P HE L+
Sbjct: 168 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILM 222
Query: 685 VESNFPKN 692
E FP+
Sbjct: 223 EEIRFPRT 230
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 68 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 116
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 117 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 169
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 170 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F IG+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ KV DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 37/248 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE---GISVAVKVLDIE---STGTWKSFFAECEALRNTR 509
+F + L+G G+FG V +RE G A+K+L E + E L+NTR
Sbjct: 6 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI-A 568
H L L + F+ + L V E+ G L + H R+ ER
Sbjct: 64 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTE-----ERARFYG 111
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+I SAL+YLH+ +V+ D+K N++LD+D K+ DFGL + E I + +++ +
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKT- 164
Query: 629 HVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW 684
G+ Y+ PE A D + GV++ E+ G P HE L+
Sbjct: 165 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILM 219
Query: 685 VESNFPKN 692
E FP+
Sbjct: 220 EEIRFPRT 227
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 66 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 114
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 167
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 64 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 112
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 165
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 63 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 111
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 164
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 165 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 456 NFSHENLIGSGSFGSVYKGYLREGISV-AVKVL---------DIESTGTWKSFFAECEAL 505
+F +IG GS+ V L++ + A+KV+ DI+ T K F +
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA--- 77
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERK--NEHGNGLNFLE 563
+ H LV L SC F+ L V E++ G L + +RK EH
Sbjct: 78 --SNHPFLVGL-HSC----FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY---- 126
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
+ +I+ AL+YLH E I++ DLK N+LLD + K+ D+G+ + L R G+
Sbjct: 127 ----SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGD-- 176
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+T G+ YI PE GE + D ++ GV++ E+ G SP
Sbjct: 177 ---TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 67 IVKL------LDVIHTENKLYLVFEFL-HQDLKTFMDASALT--GIPLPLIK--SYLFQL 115
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 168
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 43/263 (16%)
Query: 429 AKPIGVSTLFKHSPQMISYDEL------RRATGNFSHENLIGSGSFGSVYKGYLRE-GIS 481
A+P G L+ S M DEL + + +++IG G V + R G
Sbjct: 64 AQPKGTENLYFQS--MGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHE 121
Query: 482 VAVKVLDIESTGTWKSFFAEC-EALRNTRH--------RNLVKLITSCSSLDFKNMEFLA 532
AVK++++ + E EA R H +++ LI S +++ F+
Sbjct: 122 FAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS-----YESSSFMF 176
Query: 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLK 592
LV++ + G L D++ L+ E +I + A+ +LH + IVH DLK
Sbjct: 177 LVFDLMRKGELFDYL------TEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLK 227
Query: 593 PGNILLDEDMTAKVGDFGLARSL-----LERIGNQSSISSTHVLKGSIGYIPPEYGLGEK 647
P NILLD++M ++ DFG + L L + + +LK S+ P YG
Sbjct: 228 PENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYG---- 283
Query: 648 PSTAGDVYSFGVMLLEIFTGMSP 670
D+++ GV+L + G P
Sbjct: 284 --KEVDLWACGVILFTLLAGSPP 304
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 16/224 (7%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITS 519
IG+GS+G K + +G + K LD S + +E LR +H N+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
+D N L +V E+ G L I K F+ R+ + +A +
Sbjct: 74 I--IDRTNTT-LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
+D ++H DLKP N+ LD K+GDFGLAR L + + V G+ Y+
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL----NHDEDFAKEFV--GTPYYMS 184
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEV 679
PE + D++S G +L E+ M P + + AG++
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 65 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 113
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 166
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 456 NFSHENLIGSGSFGSVYKGYLREGISV-AVKVL---------DIESTGTWKSFFAECEAL 505
+F +IG GS+ V L++ + A+KV+ DI+ T K F +
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA--- 62
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERK--NEHGNGLNFLE 563
+ H LV L SC F+ L V E++ G L + +RK EH
Sbjct: 63 --SNHPFLVGL-HSC----FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY---- 111
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
+ +I+ AL+YLH E I++ DLK N+LLD + K+ D+G+ + L R G+
Sbjct: 112 ----SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGD-- 161
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+T G+ YI PE GE + D ++ GV++ E+ G SP
Sbjct: 162 ---TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRNLVKLITSC 520
IG G++G VYK G + A+K L+ E G + E L+ +H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 521 SSLDFKNMEFLALVYEFLGNG--SLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
+ + L LV+E L L D G GL + + + + + + Y
Sbjct: 70 HT-----KKRLVLVFEHLDQDLKKLLDVCEG--------GLESVTAKSFLLQLLNGIAYC 116
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+ ++ Y
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAF----GIPVRKYTHEVV--TLWYR 167
Query: 639 PPEYGLGEKP-STAGDVYSFGVMLLEIFTG 667
P+ +G K ST D++S G + E+ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 460 ENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECE------ALRNTRHRN 512
++LIG GSFG V K Y R E VA+K++ + K+F + + L N +H
Sbjct: 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMN-KHDT 112
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+K F L LV+E L +L D + N G LN + A +
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNT--NFRGVSLNLTRKF--AQQMC 167
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILL--DEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
+AL +L E+ I+HCDLKP NILL + K+ DFG + L +RI I S
Sbjct: 168 TALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI--YQXIQSRF- 223
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
Y PE LG A D++S G +L+E+ TG
Sbjct: 224 ------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 66 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 114
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 167
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 65 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 113
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 166
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 64 IVKL------LDVIHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPLIK--SYLFQL 112
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 165
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRNLVKLITSC 520
IG G++G VYK G + A+K L+ E G + E L+ +H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 521 SSLDFKNMEFLALVYEFLGNG--SLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
+ + L LV+E L L D G GL + + + + + + Y
Sbjct: 70 HT-----KKRLVLVFEHLDQDLKKLLDVCEG--------GLESVTAKSFLLQLLNGIAYC 116
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+ ++ Y
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAF----GIPVRKYTHEVV--TLWYR 167
Query: 639 PPEYGLGEKP-STAGDVYSFGVMLLEIFTG 667
P+ +G K ST D++S G + E+ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEV 584
F++ +F+ +V E SL + +H RK L E I YLH +
Sbjct: 86 FEDNDFVFVVLELCRRRSLLE-LHKRRK-----ALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 585 PIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL 644
++H DLK GN+ L+ED+ K+GDFGLA + +E G + L G+ YI PE
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKK-----TLCGTPNYIAPEVLS 190
Query: 645 GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL-VKWVESNFPKNAQQVLDRELRQ 703
+ S DV+S G ++ + G P S E L +K E + PK+ V +++
Sbjct: 191 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 250
Query: 704 LMMSSESQTIQLHDCL 719
++ + + +++ L
Sbjct: 251 MLQTDPTARPTINELL 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEV 584
F++ +F+ +V E SL + +H RK L E I YLH +
Sbjct: 86 FEDNDFVFVVLELCRRRSLLE-LHKRRK-----ALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 585 PIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL 644
++H DLK GN+ L+ED+ K+GDFGLA + +E G + L G+ YI PE
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKK-----TLCGTPNYIAPEVLS 190
Query: 645 GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL-VKWVESNFPKNAQQVLDRELRQ 703
+ S DV+S G ++ + G P S E L +K E + PK+ V +++
Sbjct: 191 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 250
Query: 704 LMMSSESQTIQLHDCL 719
++ + + +++ L
Sbjct: 251 MLQTDPTARPTINELL 266
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 34/227 (14%)
Query: 463 IGSGSFGSVYKG------YLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRNLV 514
+G G+FG V + +VAVK+L +T + ++ +E + L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER------KNEHGNGLNFLERLNIA 568
L+ +C+ K L ++ EF G+L ++ +R K+ + + L + +
Sbjct: 95 NLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+A +++L +H DL NILL E K+ DFGLAR + +
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYK--------DPD 199
Query: 629 HVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKS----FFAECEALRNTRHRNLVKLIT 518
IG GSF +VYKG L +V V +++ KS F E E L+ +H N+V+
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
S S K + + LV E +G+L ++ K + L + I L +L
Sbjct: 93 SWEST-VKGKKCIVLVTELXTSGTLKTYL----KRFKVXKIKVLR--SWCRQILKGLQFL 145
Query: 579 HNDCEVPIVHCDLKPGNILLDEDM-TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
H PI+H DLK NI + + K+GD GLA L+R S + G+ +
Sbjct: 146 HTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLA--TLKRA------SFAKAVIGTPEF 196
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673
PE EK + DVY+FG LE T P E
Sbjct: 197 XAPE-XYEEKYDESVDVYAFGXCXLEXATSEYPYSE 231
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 460 ENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECE------ALRNTRHRN 512
++LIG GSFG V K Y R E VA+K++ + K+F + + L N +H
Sbjct: 40 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMN-KHDT 93
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+K F L LV+E L +L D + N G LN + A +
Sbjct: 94 EMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNT--NFRGVSLNLTRKF--AQQMC 148
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILL--DEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
+AL +L E+ I+HCDLKP NILL + K+ DFG + L +RI I S
Sbjct: 149 TALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI--YQXIQSRF- 204
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
Y PE LG A D++S G +L+E+ TG
Sbjct: 205 ------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEV 584
F++ +F+ +V E SL + +H RK L E I YLH +
Sbjct: 90 FEDNDFVFVVLELCRRRSLLE-LHKRRK-----ALTEPEARYYLRQIVLGCQYLHRN--- 140
Query: 585 PIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL 644
++H DLK GN+ L+ED+ K+GDFGLA + +E G + L G+ YI PE
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLA-TKVEYDGERKK-----TLCGTPNYIAPEVLS 194
Query: 645 GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL-VKWVESNFPKNAQQVLDRELRQ 703
+ S DV+S G ++ + G P S E L +K E + PK+ V +++
Sbjct: 195 KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQK 254
Query: 704 LMMSSESQTIQLHDCL 719
++ + + +++ L
Sbjct: 255 MLQTDPTARPTINELL 270
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 31/242 (12%)
Query: 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTG-TWKSFFAECEALRNTR 509
R +F +G G FG V++ + + + A+K + + + + E +AL
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 510 HRNLVKLITSCSSLDFKNME---------FLALVYEFLGNGSLGDWIHGERKNEHGNGLN 560
H +V+ + L+ E +L + + +L DW++G E
Sbjct: 62 HPGIVRYFNAW--LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER---- 115
Query: 561 FLER---LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLE 617
ER L+I + IA A+++LH+ ++H DLKP NI D KVGDFGL ++ +
Sbjct: 116 --ERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ 170
Query: 618 RIGNQSSISSTHVLK---GSIG---YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPT 671
Q+ ++ G +G Y+ PE G S D++S G++L E+ S
Sbjct: 171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQ 230
Query: 672 HE 673
E
Sbjct: 231 ME 232
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 65 IVKL------LDVIHTENKLYLVFEFL-SMDLKKFMDASALT--GIPLPLIK--SYLFQL 113
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 166
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+EFL + L ++ G L ++ + +
Sbjct: 67 IVKL------LDVIHTENKLYLVFEFL-SMDLKKFMDASALT--GIPLPLIK--SYLFQL 115
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 168
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRNLVKLITSC 520
IG G++G VYK G + A+K L+ E G + E L+ +H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 521 SSLDFKNMEFLALVYEFLGNG--SLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
+ + L LV+E L L D G GL + + + + + + Y
Sbjct: 70 HT-----KKRLVLVFEHLDQDLKKLLDVCEG--------GLESVTAKSFLLQLLNGIAYC 116
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H DLKP N+L++ + K+ DFGLAR+ TH + ++ Y
Sbjct: 117 HDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-----GIPVRKYTHEI-VTLWYR 167
Query: 639 PPEYGLGEKP-STAGDVYSFGVMLLEIFTG 667
P+ +G K ST D++S G + E+ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 108/245 (44%), Gaps = 31/245 (12%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE---GISVAVKVLDIE---STGTWKSFFAECEALRNTR 509
+F + L+G G+FG V +RE G A+K+L E + E L+NTR
Sbjct: 6 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI-A 568
H L L + F+ + L V E+ G L + H R+ ER
Sbjct: 64 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTE-----ERARFYG 111
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+I SAL+YLH+ +V+ D+K N++LD+D K+ DFGL + E I + +++
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKX- 164
Query: 629 HVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH-ESFAGEVSLVKWVES 687
G+ Y+ PE A D + GV++ E+ G P + + L+ E
Sbjct: 165 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 222
Query: 688 NFPKN 692
FP+
Sbjct: 223 RFPRT 227
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 456 NFSHENLIGSGSFGSVYKGYLREGISV-AVKVL---------DIESTGTWKSFFAECEAL 505
+F +IG GS+ V L++ + A+KV+ DI+ T K F +
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA--- 66
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERK--NEHGNGLNFLE 563
+ H LV L SC F+ L V E++ G L + +RK EH
Sbjct: 67 --SNHPFLVGL-HSC----FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY---- 115
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
+ +I+ AL+YLH E I++ DLK N+LLD + K+ D+G+ + L R G+
Sbjct: 116 ----SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGD-- 165
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+T G+ YI PE GE + D ++ GV++ E+ G SP
Sbjct: 166 ---TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 37/248 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE---GISVAVKVLDIE---STGTWKSFFAECEALRNTR 509
+F + L+G G+FG V +RE G A+K+L E + E L+NTR
Sbjct: 6 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI-A 568
H L L + F+ + L V E+ G L + H R+ ER
Sbjct: 64 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTE-----ERARFYG 111
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+I SAL+YLH+ +V+ D+K N++LD+D K+ DFGL + E I + +++
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKX- 164
Query: 629 HVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW 684
G+ Y+ PE A D + GV++ E+ G P HE L+
Sbjct: 165 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILM 219
Query: 685 VESNFPKN 692
E FP+
Sbjct: 220 EEIRFPRT 227
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 456 NFSHENLIGSGSFGSVYKGYLREGISV-AVKVL---------DIESTGTWKSFFAECEAL 505
+F +IG GS+ V L++ + A++V+ DI+ T K F +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQA--- 109
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERK--NEHGNGLNFLE 563
+ H LV L SC F+ L V E++ G L + +RK EH
Sbjct: 110 --SNHPFLVGL-HSC----FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY---- 158
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
+ +I+ AL+YLH E I++ DLK N+LLD + K+ D+G+ + L R G+
Sbjct: 159 ----SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGD-- 208
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+T G+ YI PE GE + D ++ GV++ E+ G SP
Sbjct: 209 ---TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 530 FLALVYEFLGNGSLGDWIHGE---RKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPI 586
+L + + +L DW++ EHG L+ I I IA A+++LH+ +
Sbjct: 135 YLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLH------IFIQIAEAVEFLHSKG---L 185
Query: 587 VHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSIS-----STHVLKGSIG---YI 638
+H DLKP NI D KVGDFGL ++ + Q+ ++ +TH G +G Y+
Sbjct: 186 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHX--GQVGTKLYM 243
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673
PE G S D++S G++L E+ S E
Sbjct: 244 SPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME 278
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 37/265 (13%)
Query: 433 GVSTLFKHSPQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVL---D 488
G L+ P M + + + ++G GSFG V + G AVKV+
Sbjct: 10 GRENLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 69
Query: 489 IESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH 548
++ +S E + L+ H N++KL F++ + LV E G L D I
Sbjct: 70 VKQKTDKESLLREVQLLKQLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEII 124
Query: 549 GERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD---EDMTAK 605
++ + ++ I + S + Y+H + IVH DLKP N+LL+ +D +
Sbjct: 125 SRKR------FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIR 175
Query: 606 VGDFGLARSLLERIGNQSSISSTHVLKGSIG---YIPPEYGLGEKPSTAGDVYSFGVMLL 662
+ DFGL+ + ++ +K IG YI PE G DV+S GV+L
Sbjct: 176 IIDFGLS----------THFEASKKMKDKIGTAYYIAPEVLHGTYDEKC-DVWSTGVILY 224
Query: 663 EIFTGMSPTHESFAGEVSLVKWVES 687
+ +G P + A E ++K VE
Sbjct: 225 ILLSGCPPFNG--ANEYDILKKVEK 247
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 104/248 (41%), Gaps = 43/248 (17%)
Query: 452 RATGNFSHENLIGSGSFGSVYKGYLREGIS---VAVKVLDIESTGTWKSFFAECEALRNT 508
R +F ++G G+FG V K R + A+K + + + +E L +
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKA--RNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASL 59
Query: 509 RH-------------RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEH 555
H RN VK T+ K L + E+ N +L D IH E N+
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAV-----KKKSTLFIQXEYCENRTLYDLIHSENLNQQ 114
Query: 556 GNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615
+ E + I AL Y+H+ I+H +LKP NI +DE K+GDFGLA+++
Sbjct: 115 RD-----EYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNV 166
Query: 616 -----LERIGNQSSISSTHVLKGSIG---YIPPEY--GLGEKPSTAGDVYSFGVMLLEIF 665
+ ++ +Q+ S+ L +IG Y+ E G G D YS G++ E
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKI-DXYSLGIIFFEXI 225
Query: 666 TGMSPTHE 673
S E
Sbjct: 226 YPFSTGXE 233
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNLVKLI-- 517
+GSG++GSV Y ++ G+ +AVK L +S K + E L++ +H N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 518 -TSCSSLDFKNMEF--LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
T +SL+ EF + LV +G L + + ++ + + + FL I
Sbjct: 119 FTPATSLE----EFNDVYLVTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQILRG 166
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 167 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-------- 215
Query: 635 IGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 216 -WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 37/248 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE---GISVAVKVLDIE---STGTWKSFFAECEALRNTR 509
+F + L+G G+FG V +RE G A+K+L E + E L+NTR
Sbjct: 6 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI-A 568
H L L + F+ + L V E+ G L + H R+ ER
Sbjct: 64 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTE-----ERARFYG 111
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+I SAL+YLH+ +V+ D+K N++LD+D K+ DFGL + E I + +++
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKX- 164
Query: 629 HVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW 684
G+ Y+ PE A D + GV++ E+ G P HE L+
Sbjct: 165 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILM 219
Query: 685 VESNFPKN 692
E FP+
Sbjct: 220 EEIRFPRT 227
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 45/259 (17%)
Query: 463 IGSGSFGSVYKGY--LREGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITS 519
+G G++ +VYKG L + + VA+K + +E G + E L++ +H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
+ + L LV+E+L + L ++ ++ GN +N + L Y H
Sbjct: 69 IHT-----EKSLTLVFEYL-DKDLKQYL-----DDCGNIINMHNVKLFLFQLLRGLAYCH 117
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
++H DLKP N+L++E K+ DFGLAR+ + I ++ + ++ Y P
Sbjct: 118 RQ---KVLHRDLKPQNLLINERGELKLADFGLARA--KSIPTKTYDNEV----VTLWYRP 168
Query: 640 PEYGLGEKP-STAGDVYSFGVMLLEIFTGM--------------------SPTHESFAGE 678
P+ LG ST D++ G + E+ TG +PT E++ G
Sbjct: 169 PDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 228
Query: 679 VSLVKWVESNFPKNAQQVL 697
+S ++ N+PK + L
Sbjct: 229 LSNEEFKTYNYPKYRAEAL 247
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 34/227 (14%)
Query: 463 IGSGSFGSVYKG------YLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRNLV 514
+G G+FG V + +VAVK+L +T + ++ +E + L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER------KNEHGNGLNFLERLNIA 568
L+ +C+ K L ++ EF G+L ++ +R K+ + + L + +
Sbjct: 95 NLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+A +++L + +H DL NILL E K+ DFGLAR + +
Sbjct: 151 FQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYK--------DPD 199
Query: 629 HVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 22/223 (9%)
Query: 455 GNFSHENLIGSGSFGSVYK-----GYLREGISVAVKVLDIESTGTWKSFFAECEALRNTR 509
G + +L+G GS+G V + R + + K + E + LR R
Sbjct: 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR 64
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
H+N+++L+ + + + M ++ + Y G + D + +R +
Sbjct: 65 HKNVIQLVDVLYNEEKQKM-YMVMEYCVCGMQEMLDSVPEKR-------FPVCQAHGYFC 116
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
+ L+YLH+ IVH D+KPGN+LL T K+ G+A +L + + +S
Sbjct: 117 QLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-- 171
Query: 630 VLKGSIGYIPPEY--GLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+GS + PPE GL D++S GV L I TG+ P
Sbjct: 172 --QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 37/248 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE---GISVAVKVLDIE---STGTWKSFFAECEALRNTR 509
+F + L+G G+FG V +RE G A+K+L E + E L+NTR
Sbjct: 11 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI-A 568
H L L + F+ + L V E+ G L + H R+ ER
Sbjct: 69 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTE-----ERARFYG 116
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+I SAL+YLH+ +V+ D+K N++LD+D K+ DFGL + E I + +++
Sbjct: 117 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKX- 169
Query: 629 HVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW 684
G+ Y+ PE A D + GV++ E+ G P HE L+
Sbjct: 170 --FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILM 224
Query: 685 VESNFPKN 692
E FP+
Sbjct: 225 EEIRFPRT 232
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 456 NFSHENL---IGSGSFGSVYKGYLREGISV-AVKVLDIEST---GTWKSFFAECEALRNT 508
NF H + IG GSFG V + + A+K ++ + ++ F E + ++
Sbjct: 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 509 RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIA 568
H LV L S F++ E + +V + L G L + ++N H E + +
Sbjct: 73 EHPFLVNLWYS-----FQDEEDMFMVVDLLLGGDLR---YHLQQNVHFKE----ETVKLF 120
Query: 569 I-DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISS 627
I ++ ALDYL N I+H D+KP NILLDE + DF +A ++L R ++ I++
Sbjct: 121 ICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIA-AMLPR---ETQITT 173
Query: 628 THVLKGSIGYIPPEYGLGEK---PSTAGDVYSFGVMLLEIFTGMSPTH 672
+ G+ Y+ PE K S A D +S GV E+ G P H
Sbjct: 174 ---MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 101/235 (42%), Gaps = 36/235 (15%)
Query: 462 LIGSGSFGSVYKGYLR-EGISVAVKVLDIESTG--TWKSFFAECEALRNTRHRNLVKLIT 518
++G GSFG V K R AVKV++ S + E E L+ H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWI-HGERKNEHGNGLNFLERLNIAIDIASALDY 577
++ +V E G L D I +R +EH I + S + Y
Sbjct: 89 I-----LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFSGITY 136
Query: 578 LHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
+H IVH DLKP NILL ++D K+ DFGL+ + + I G+
Sbjct: 137 MHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-------GT 186
Query: 635 IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAG--EVSLVKWVES 687
YI PE G DV+S GV+L + +G P F G E ++K VE+
Sbjct: 187 AYYIAPEVLRGTYDEKC-DVWSAGVILYILLSGTPP----FYGKNEYDILKRVET 236
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 62
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K++ +L LV +++ H R + L
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQ---TL 119
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 177 EPNVSXICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 225
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 226 DSGVDQLVE 234
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 37/243 (15%)
Query: 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVL---DIESTGTWKSFFAECEALRNTR 509
+ + + ++G GSFG V + G AVKV+ ++ +S E + L+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
H N++KL F++ + LV E G L D I ++ + ++ I
Sbjct: 85 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKR------FSEVDAARIIR 133
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSIS 626
+ S + Y+H + IVH DLKP N+LL+ +D ++ DFGL+ +
Sbjct: 134 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS----------THFE 180
Query: 627 STHVLKGSIG---YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683
++ +K IG YI PE G DV+S GV+L + +G P + A E ++K
Sbjct: 181 ASKKMKDKIGTAYYIAPEVLHGTYDEKC-DVWSTGVILYILLSGCPPFNG--ANEYDILK 237
Query: 684 WVE 686
VE
Sbjct: 238 KVE 240
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 88
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 89 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 135
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+DE +V DFG A+ + R T
Sbjct: 136 QIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR---------TW 183
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 184 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 137/318 (43%), Gaps = 52/318 (16%)
Query: 461 NLIGSGSFGSVYKGYLREGISV----AVKVLD----IESTGTWKSFFAECEALRNTRHRN 512
++G G +G V++ G + A+KVL + + AE L +H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI--AID 570
+V LI + F+ L L+ E+L G L ++ ER+ G+ F+E +
Sbjct: 83 IVDLIYA-----FQTGGKLYLILEYLSGGEL--FMQLERE-----GI-FMEDTACFYLAE 129
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I+ AL +LH I++ DLKP NI+L+ K+ DFGL + + + TH
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH------DGTVTHT 180
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP 690
G+I Y+ PE + + A D +S G ++ ++ TG P F GE
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP----FTGE------------ 224
Query: 691 KNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPG--GRIDIREALRRL 748
N ++ +D+ L+ + T + D L +++ S PG G + R +
Sbjct: 225 -NRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283
Query: 749 KNAQKILLKRRQPNEKAM 766
N +++L ++ +P K +
Sbjct: 284 -NWEELLARKVEPPFKPL 300
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
IG G+ G+VY + G VA++ ++++ + E +R ++ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 85
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
+ + L +V E+L GSL D + +E + + + AL++LH++
Sbjct: 86 ---YLVGDELWVVMEYLAGGSLTDVVTETCMDEG-------QIAAVCRECLQALEFLHSN 135
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
++H D+K NILL D + K+ DFG + +S + G+ ++ PE
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSE------MVGTPYWMAPE 186
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ D++S G+M +E+ G P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
IG G+ G+VY + G VA++ ++++ + E +R ++ N+V + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 86
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
+ + L +V E+L GSL D + +E E L AL++LH++
Sbjct: 87 ---YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ-------ALEFLHSN 136
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
++H D+K NILL D + K+ DFG +I + S S V G+ ++ PE
Sbjct: 137 ---QVIHRDIKSDNILLGMDGSVKLTDFGFC----AQITPEQSKRSXMV--GTPYWMAPE 187
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ D++S G+M +E+ G P
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 28/214 (13%)
Query: 463 IGSGSFGSVYKGYLREGIS-VAVKV--LDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
IG G++G+V+K RE VA+K LD + G S E L+ +H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 520 CSSLDFKNMEFLALVYEFLGNG--SLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
S D K L LV+EF D +G+ E F + L +
Sbjct: 70 LHS-DKK----LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLF--------QLLKGLGF 116
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
H+ ++H DLKP N+L++ + K+ DFGLAR+ G S V+ ++ Y
Sbjct: 117 CHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAF----GIPVRCYSAEVV--TLWY 167
Query: 638 IPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSP 670
PP+ G K ST+ D++S G + E+ P
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 458 SHENLIGSGSFGSVYK-GYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKL 516
S ++G G FG V+K G+ +A K++ + E + H NL++L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
+ F++ + LV E++ G L D I E N L L+ + I +
Sbjct: 152 YDA-----FESKNDIVLVMEYVDGGELFDRIIDESYN-----LTELDTILFMKQICEGIR 201
Query: 577 YLHNDCEVPIVHCDLKPGNIL-LDEDMTA-KVGDFGLARSLLERIGNQSSISSTHVLKGS 634
++H ++ I+H DLKP NIL ++ D K+ DFGLAR R V G+
Sbjct: 202 HMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR-------EKLKVNFGT 251
Query: 635 IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
++ PE + S D++S GV+ + +G+SP
Sbjct: 252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
IG G+ G+VY + G VA++ ++++ + E +R ++ N+V + S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 85
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
+ + L +V E+L GSL D + +E + + + AL++LH++
Sbjct: 86 ---YLVGDELWVVMEYLAGGSLTDVVTETCMDEG-------QIAAVCRECLQALEFLHSN 135
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
++H D+K NILL D + K+ DFG +I + S S V G+ ++ PE
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTDFGFC----AQITPEQSKRSXMV--GTPYWMAPE 186
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ D++S G+M +E+ G P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
IG G+ G+VY + G VA++ ++++ + E +R ++ N+V + S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 86
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
+ + L +V E+L GSL D + +E + + + AL++LH++
Sbjct: 87 ---YLVGDELWVVMEYLAGGSLTDVVTETCMDEG-------QIAAVCRECLQALEFLHSN 136
Query: 582 CEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPE 641
++H ++K NILL D + K+ DFG +I + S ST V G+ ++ PE
Sbjct: 137 ---QVIHRNIKSDNILLGMDGSVKLTDFGFC----AQITPEQSKRSTMV--GTPYWMAPE 187
Query: 642 YGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ D++S G+M +E+ G P
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 37/243 (15%)
Query: 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVL---DIESTGTWKSFFAECEALRNTR 509
+ + + ++G GSFG V + G AVKV+ ++ +S E + L+
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
H N++KL F++ + LV E G L D I ++ + ++ I
Sbjct: 108 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKR------FSEVDAARIIR 156
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSIS 626
+ S + Y+H + IVH DLKP N+LL+ +D ++ DFGL+ +
Sbjct: 157 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS----------THFE 203
Query: 627 STHVLKGSIG---YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683
++ +K IG YI PE G DV+S GV+L + +G P + A E ++K
Sbjct: 204 ASKKMKDKIGTAYYIAPEVLHGTYDEKC-DVWSTGVILYILLSGCPPFNG--ANEYDILK 260
Query: 684 WVE 686
VE
Sbjct: 261 KVE 263
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 461 NLIGSGSFGSVYKG-YLREG----ISVAVKVLDIESTGTWKSFFAECE---ALRNTRHRN 512
++GSG FG+V+KG ++ EG I V +KV IE +SF A + A+ + H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKV--IEDKSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+V+L+ C L LV ++L GSL D + +H L LN + IA
Sbjct: 77 IVRLLGLCPG------SSLQLVTQYLPLGSLLDHV-----RQHRGALGPQLLLNWGVQIA 125
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ YL E +VH +L N+LL +V DFG+A LL Q S K
Sbjct: 126 KGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVA-DLLPPDDKQLLYSEA---K 178
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
I ++ E K + DV+S+GV + E+ T G P
Sbjct: 179 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 137/318 (43%), Gaps = 52/318 (16%)
Query: 461 NLIGSGSFGSVYKGYLREGISV----AVKVLD----IESTGTWKSFFAECEALRNTRHRN 512
++G G +G V++ G + A+KVL + + AE L +H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI--AID 570
+V LI + F+ L L+ E+L G L ++ ER+ G+ F+E +
Sbjct: 83 IVDLIYA-----FQTGGKLYLILEYLSGGEL--FMQLERE-----GI-FMEDTACFYLAE 129
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I+ AL +LH I++ DLKP NI+L+ K+ DFGL + + + TH
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH------DGTVTHX 180
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP 690
G+I Y+ PE + + A D +S G ++ ++ TG P F GE
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP----FTGE------------ 224
Query: 691 KNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPG--GRIDIREALRRL 748
N ++ +D+ L+ + T + D L +++ S PG G + R +
Sbjct: 225 -NRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283
Query: 749 KNAQKILLKRRQPNEKAM 766
N +++L ++ +P K +
Sbjct: 284 -NWEELLARKVEPPFKPL 300
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 35/225 (15%)
Query: 457 FSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIESTGTWK-------SFFAECEALRNT 508
F+ IG GSFG V+KG R VA+K++D+E + ++C++ T
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 509 RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIA 568
++ + L ++ E+LG GS D + E G L+ + I
Sbjct: 89 KYYG-----------SYLKDTKLWIIMEYLGGGSALDLL------EPGP-LDETQIATIL 130
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+I LDYLH++ ++ H D+K N+LL E K+ DFG+A L + +++
Sbjct: 131 REILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-- 185
Query: 629 HVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673
G+ ++ PE + D++S G+ +E+ G P E
Sbjct: 186 ----GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 226
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 461 NLIGSGSFGSVYKG-YLREG----ISVAVKVLDIESTGTWKSFFAECE---ALRNTRHRN 512
++GSG FG+V+KG ++ EG I V +KV IE +SF A + A+ + H +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKV--IEDKSGRQSFQAVTDHMLAIGSLDHAH 94
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+V+L+ C L LV ++L GSL D + +H L LN + IA
Sbjct: 95 IVRLLGLCPG------SSLQLVTQYLPLGSLLDHV-----RQHRGALGPQLLLNWGVQIA 143
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ YL E +VH +L N+LL +V DFG+A LL Q S K
Sbjct: 144 KGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVA-DLLPPDDKQLLYSEA---K 196
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
I ++ E K + DV+S+GV + E+ T G P
Sbjct: 197 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 37/243 (15%)
Query: 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVL---DIESTGTWKSFFAECEALRNTR 509
+ + + ++G GSFG V + G AVKV+ ++ +S E + L+
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
H N++KL F++ + LV E G L D I ++ + ++ I
Sbjct: 109 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKR------FSEVDAARIIR 157
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSIS 626
+ S + Y+H + IVH DLKP N+LL+ +D ++ DFGL+ +
Sbjct: 158 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS----------THFE 204
Query: 627 STHVLKGSIG---YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683
++ +K IG YI PE G DV+S GV+L + +G P + A E ++K
Sbjct: 205 ASKKMKDKIGTAYYIAPEVLHGTYDEKC-DVWSTGVILYILLSGCPPFNG--ANEYDILK 261
Query: 684 WVE 686
VE
Sbjct: 262 KVE 264
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 62/263 (23%)
Query: 442 PQMISYDE-LRRATGNFSHENLIGSGSFGSVYK------GYLREGISVAVKVLDIESTGT 494
P + Y+E N +G+G+FG V + G + VAVK+L +
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 495 WK-SFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERK 552
K + +E + + + +H N+V L+ +C+ + + ++ E+ G L
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACT-----HGGPVLVITEYCCYGDL--------- 137
Query: 553 NEHGNGLNFLER----------LNIAIDIASALDYLHNDCEVP----------IVHCDLK 592
LNFL R IA AS D LH +V +H D+
Sbjct: 138 ------LNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVA 191
Query: 593 PGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKP 648
N+LL AK+GDFGLAR ++ S +++KG+ + ++ PE
Sbjct: 192 ARNVLLTNGHVAKIGDFGLARDIMN--------DSNYIVKGNARLPVKWMAPESIFDCVY 243
Query: 649 STAGDVYSFGVMLLEIFT-GMSP 670
+ DV+S+G++L EIF+ G++P
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNP 266
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 91 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 140
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 141 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR---- 193
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 194 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 35/212 (16%)
Query: 469 GSVYKGYLREGISVAVKVLDIESTGTWKS--FFAECEALRNTRHRNLVKLITSCSSLDFK 526
G ++KG +G + VKVL + T KS F EC LR H N++ ++ +C S
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS---P 79
Query: 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFL----ERLNIAIDIASALDYLHNDC 582
L+ ++ GSL + +H G NF+ + + A+D+A + +LH
Sbjct: 80 PAPHPTLITHWMPYGSLYNVLH--------EGTNFVVDQSQAVKFALDMARGMAFLHT-L 130
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
E I L ++++DEDMTA++ + S + G + + ++ PE
Sbjct: 131 EPLIPRHALNSRSVMIDEDMTARISMADVKFS-FQSPGRMYAPA----------WVAPE- 178
Query: 643 GLGEKPS----TAGDVYSFGVMLLEIFTGMSP 670
L +KP + D++SF V+L E+ T P
Sbjct: 179 ALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 35/225 (15%)
Query: 457 FSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIESTGTWK-------SFFAECEALRNT 508
F+ IG GSFG V+KG R VA+K++D+E + ++C++ T
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 509 RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIA 568
++ + L ++ E+LG GS D + E G L+ + I
Sbjct: 69 KYYG-----------SYLKDTKLWIIMEYLGGGSALDLL------EPGP-LDETQIATIL 110
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+I LDYLH++ ++ H D+K N+LL E K+ DFG+A L + +++
Sbjct: 111 REILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-- 165
Query: 629 HVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673
G+ ++ PE + D++S G+ +E+ G P E
Sbjct: 166 ----GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 206
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 91 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 140
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 141 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR---- 193
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 194 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 91 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 140
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 141 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR---- 193
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 194 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 35/225 (15%)
Query: 457 FSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIESTGTWK-------SFFAECEALRNT 508
F+ IG GSFG V+KG R VA+K++D+E + ++C++ T
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 509 RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIA 568
++ + L ++ E+LG GS D + E G L+ + I
Sbjct: 84 KYYG-----------SYLKDTKLWIIMEYLGGGSALDLL------EPGP-LDETQIATIL 125
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+I LDYLH++ ++ H D+K N+LL E K+ DFG+A L + + I
Sbjct: 126 REILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTD-----TQIKRN 177
Query: 629 HVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673
+ G+ ++ PE + D++S G+ +E+ G P E
Sbjct: 178 XFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 221
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 39/243 (16%)
Query: 440 HSPQMISYDELRRATGN----FSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIESTGT 494
HSP + ++ + F+ IG GSFG V+KG R VA+K++D+E
Sbjct: 4 HSPVAVQVPGMQNNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED 63
Query: 495 WK-------SFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI 547
+ ++C++ T++ + L ++ E+LG GS D +
Sbjct: 64 EIEDIQQEITVLSQCDSSYVTKYYG-----------SYLKGSKLWIIMEYLGGGSALDLL 112
Query: 548 HGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607
+E + + +I LDYLH++ ++ H D+K N+LL E K+
Sbjct: 113 RAGPFDE-------FQIATMLKEILKGLDYLHSEKKI---HRDIKAANVLLSEQGDVKLA 162
Query: 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
DFG+A L + +++ G+ ++ PE + D++S G+ +E+ G
Sbjct: 163 DFGVAGQLTDTQIKRNTFV------GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG 216
Query: 668 MSP 670
P
Sbjct: 217 EPP 219
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT--RHRNLVKLITSC 520
IG G FG V++G R G VAVK+ S+ +S+F E E + RH N++ I +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAA- 104
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
+ D L LV ++ +GSL D+++ R G+ + +A+ AS L +LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGM-----IKLALSTASGLAHLHM 157
Query: 581 DC-----EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
+ + I H DLK NIL+ ++ T + D GLA + + I+ H + G+
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTK 215
Query: 636 GYIPPEY---GLGEKPSTA---GDVYSFGVMLLEI 664
Y+ PE + K + D+Y+ G++ EI
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT--RHRNLVKLITSC 520
IG G FG V++G R G VAVK+ S+ +S+F E E + RH N++ I +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAA- 65
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
+ D L LV ++ +GSL D+++ R G+ + +A+ AS L +LH
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGM-----IKLALSTASGLAHLHM 118
Query: 581 DC-----EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
+ + I H DLK NIL+ ++ T + D GLA + + I+ H + G+
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTK 176
Query: 636 GYIPPEY---GLGEKPSTA---GDVYSFGVMLLEI 664
Y+ PE + K + D+Y+ G++ EI
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 89 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 138
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 139 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 191
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 192 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT--RHRNLVKLITSC 520
IG G FG V++G R G VAVK+ S+ +S+F E E + RH N++ I +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAA- 66
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
+ D L LV ++ +GSL D+++ R G+ + +A+ AS L +LH
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGM-----IKLALSTASGLAHLHM 119
Query: 581 DC-----EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
+ + I H DLK NIL+ ++ T + D GLA + + I+ H + G+
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTK 177
Query: 636 GYIPPEY---GLGEKPSTA---GDVYSFGVMLLEI 664
Y+ PE + K + D+Y+ G++ EI
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGL-GEKPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E+ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+++D+ KV DFGLA+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 457 FSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLV 514
+ +++G+G+F V R VA+K + E+ G S E L +H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER--LNIAIDIA 572
L +++ L L+ + + G L D R E G + ER + +
Sbjct: 80 ALDDI-----YESGGHLYLIMQLVSGGELFD-----RIVEKGF---YTERDASRLIFQVL 126
Query: 573 SALDYLHNDCEVPIVHCDLKPGNIL---LDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
A+ YLH+ + IVH DLKP N+L LDED + DFGL++ + + S+ ST
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-----MEDPGSVLSTA 178
Query: 630 VLKGSIGYIPPEYGLGEKP-STAGDVYSFGVMLLEIFTGMSPTHES 674
G+ GY+ PE L +KP S A D +S GV+ + G P ++
Sbjct: 179 C--GTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 103 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 149
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 197
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 198 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT--RHRNLVKLITSC 520
IG G FG V++G R G VAVK+ S+ +S+F E E + RH N++ I +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAA- 71
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
+ D L LV ++ +GSL D+++ R G+ + +A+ AS L +LH
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGM-----IKLALSTASGLAHLHM 124
Query: 581 DC-----EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
+ + I H DLK NIL+ ++ T + D GLA + + I+ H + G+
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTK 182
Query: 636 GYIPPEY---GLGEKPSTA---GDVYSFGVMLLEI 664
Y+ PE + K + D+Y+ G++ EI
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 35/225 (15%)
Query: 457 FSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIESTGTWK-------SFFAECEALRNT 508
F+ IG GSFG V+KG R VA+K++D+E + ++C++ T
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 509 RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIA 568
++ + L ++ E+LG GS D + E G L+ + I
Sbjct: 69 KYYG-----------SYLKDTKLWIIMEYLGGGSALDLL------EPGP-LDETQIATIL 110
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628
+I LDYLH++ ++ H D+K N+LL E K+ DFG+A L + + I
Sbjct: 111 REILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTD-----TQIKRN 162
Query: 629 HVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673
+ G+ ++ PE + D++S G+ +E+ G P E
Sbjct: 163 XFV-GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 206
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 101/235 (42%), Gaps = 36/235 (15%)
Query: 462 LIGSGSFGSVYKGYLR-EGISVAVKVLDIESTG--TWKSFFAECEALRNTRHRNLVKLIT 518
++G GSFG V K R AVKV++ S + E E L+ H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGD-WIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
++ +V E G L D I +R +EH I + S + Y
Sbjct: 89 I-----LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFSGITY 136
Query: 578 LHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
+H IVH DLKP NILL ++D K+ DFGL+ + + I G+
Sbjct: 137 MHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-------GT 186
Query: 635 IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAG--EVSLVKWVES 687
YI PE G DV+S GV+L + +G P F G E ++K VE+
Sbjct: 187 AYYIAPEVLRGTYDEKC-DVWSAGVILYILLSGTPP----FYGKNEYDILKRVET 236
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT--RHRNLVKLITSC 520
IG G FG V++G R G VAVK+ S+ +S+F E E + RH N++ I +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAA- 68
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
+ D L LV ++ +GSL D+++ R G+ + +A+ AS L +LH
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGM-----IKLALSTASGLAHLHM 121
Query: 581 DC-----EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
+ + I H DLK NIL+ ++ T + D GLA + + I+ H + G+
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTK 179
Query: 636 GYIPPEY---GLGEKPSTA---GDVYSFGVMLLEI 664
Y+ PE + K + D+Y+ G++ EI
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 101/235 (42%), Gaps = 36/235 (15%)
Query: 462 LIGSGSFGSVYKGYLR-EGISVAVKVLDIESTG--TWKSFFAECEALRNTRHRNLVKLIT 518
++G GSFG V K R AVKV++ S + E E L+ H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGD-WIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
++ +V E G L D I +R +EH I + S + Y
Sbjct: 89 I-----LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFSGITY 136
Query: 578 LHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
+H IVH DLKP NILL ++D K+ DFGL+ + + I G+
Sbjct: 137 MHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-------GT 186
Query: 635 IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAG--EVSLVKWVES 687
YI PE G DV+S GV+L + +G P F G E ++K VE+
Sbjct: 187 AYYIAPEVLRGTYDEKC-DVWSAGVILYILLSGTPP----FYGKNEYDILKRVET 236
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT--RHRNLVKLITSC 520
IG G FG V++G R G VAVK+ S+ +S+F E E + RH N++ I +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAA- 91
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
+ D L LV ++ +GSL D+++ R G+ + +A+ AS L +LH
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGM-----IKLALSTASGLAHLHM 144
Query: 581 DC-----EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
+ + I H DLK NIL+ ++ T + D GLA + + I+ H + G+
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRV-GTK 202
Query: 636 GYIPPEY---GLGEKPSTA---GDVYSFGVMLLEI 664
Y+ PE + K + D+Y+ G++ EI
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 457 FSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLV 514
+ +++G+G+F V R VA+K + E+ G S E L +H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER--LNIAIDIA 572
L +++ L L+ + + G L D R E G + ER + +
Sbjct: 80 ALDDI-----YESGGHLYLIMQLVSGGELFD-----RIVEKGF---YTERDASRLIFQVL 126
Query: 573 SALDYLHNDCEVPIVHCDLKPGNIL---LDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
A+ YLH+ + IVH DLKP N+L LDED + DFGL++ + + S+ ST
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-----MEDPGSVLSTA 178
Query: 630 VLKGSIGYIPPEYGLGEKP-STAGDVYSFGVMLLEIFTGMSPTHES 674
G+ GY+ PE L +KP S A D +S GV+ + G P ++
Sbjct: 179 C--GTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 30/183 (16%)
Query: 527 NMEFLALVYEFLGNGSLGDWIHGERKNEH-----GNGLNFLERLNIAIDIASALD---YL 578
N + + ++YE++ N S+ + +E+ N F+ I I S L+ Y+
Sbjct: 114 NYDEVYIIYEYMENDSILKF------DEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYI 167
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
HN E I H D+KP NIL+D++ K+ DFG + ++++ S +G+ ++
Sbjct: 168 HN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS--------RGTYEFM 217
Query: 639 PPEYGLGEKPSTAG--DVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQV 696
PPE+ E D++S G+ L +F + P F+ ++SLV+ + KN +
Sbjct: 218 PPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP----FSLKISLVELFNNIRTKNIEYP 273
Query: 697 LDR 699
LDR
Sbjct: 274 LDR 276
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 110/247 (44%), Gaps = 51/247 (20%)
Query: 463 IGSGSFGSVYKGYLREGIS-VAVKVLDIE--STGTW-----------KSFFAECEALRNT 508
+GSG++G V + G S A+KV+ G + + + E L++
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 509 RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIA 568
H N++KL F++ ++ LV EF G L + I K + + N +++
Sbjct: 104 DHPNIIKLFDV-----FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQ---- 154
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDED---MTAKVGDFGLARSLLERIGNQSSI 625
I S + YLH IVH D+KP NILL+ + K+ DFGL+ S
Sbjct: 155 --ILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLS----------SFF 199
Query: 626 SSTHVLKGSIG---YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE--VS 680
S + L+ +G YI PE L +K + DV+S GV++ + G P F G+
Sbjct: 200 SKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPP----FGGQNDQD 254
Query: 681 LVKWVES 687
++K VE
Sbjct: 255 IIKKVEK 261
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKXQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 120/290 (41%), Gaps = 58/290 (20%)
Query: 441 SPQMISYDELRRATGNFSHENLIGSGSFGSVYKG---YLREGISVAVKVLDIESTGTWKS 497
+P S D RR T +G G++G VYK E +++ L+ E G +
Sbjct: 27 APSATSIDRYRRITK-------LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGT 79
Query: 498 FFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGN 557
E L+ +HRN+++L S+ N L L++E+ N L ++
Sbjct: 80 AIREVSLLKELQHRNIIEL----KSVIHHNHR-LHLIFEYAEN-DLKKYMDKNPDVSMRV 133
Query: 558 GLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD-----EDMTAKVGDFGLA 612
+FL +L ++ + LH D LKP N+LL E K+GDFGLA
Sbjct: 134 IKSFLYQLINGVNFCHSRRCLHRD---------LKPQNLLLSVSDASETPVLKIGDFGLA 184
Query: 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-STAGDVYSFGVMLLE------IF 665
R+ I TH + ++ Y PPE LG + ST+ D++S + E +F
Sbjct: 185 RAFGIPIRQ-----FTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF 238
Query: 666 TGMS--------------PTHESFAGEVSLVKWVESNFPKNAQQVLDREL 701
G S P ++ G +L W +S FPK + L R L
Sbjct: 239 PGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQS-FPKFRGKTLKRVL 287
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 62
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 119
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 177 EPNVSXICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 225
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 226 DSGVDQLVE 234
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 32/225 (14%)
Query: 457 FSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLV 514
+ +++G+G+F V R VA+K + E+ G S E L +H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER--LNIAIDIA 572
L +++ L L+ + + G L D R E G + ER + +
Sbjct: 80 ALDDI-----YESGGHLYLIMQLVSGGELFD-----RIVEKGF---YTERDASRLIFQVL 126
Query: 573 SALDYLHNDCEVPIVHCDLKPGNIL---LDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
A+ YLH+ + IVH DLKP N+L LDED + DFGL++ + + S+ ST
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-----MEDPGSVLSTA 178
Query: 630 VLKGSIGYIPPEYGLGEKP-STAGDVYSFGVMLLEIFTGMSPTHE 673
G+ GY+ PE L +KP S A D +S GV+ + G P ++
Sbjct: 179 C--GTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 18 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 63
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 120
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 121 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 177
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 178 EPNVSXICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 226
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 227 DSGVDQLVE 235
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 24/214 (11%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVK--VLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
IG G+FG V+K R+ G VA+K +++ E G + E + L+ +H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 520 C---SSLDFKNMEFLALVYEFLGN---GSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
C +S + + LV++F + G L + + +E + L +
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML---------LN 136
Query: 574 ALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKG 633
L Y+H + I+H D+K N+L+ D K+ DFGLAR+ +Q + V+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-- 191
Query: 634 SIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
++ Y PPE LGE+ D++ G ++ E++T
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 96
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 97 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--------AA 143
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 144 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 191
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 192 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 21 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 66
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 67 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 123
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 124 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 180
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 181 EPNVSXICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 229
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 230 DSGVDQLVE 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 103 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 149
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 197
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 39/254 (15%)
Query: 463 IGSGSFGSVYKGYLREGIS---VAVKVL---DIESTGTWKSFFAECEALRNTRHRNLVKL 516
+G G FG+VY RE S VA+KVL IE G E E + H N+++L
Sbjct: 31 LGKGKFGNVYLA--REKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI--DIASA 574
F + + L+ E+ G L E F E+ I ++A A
Sbjct: 89 YNY-----FYDRRRIYLILEYAPRGEL--------YKELQKSCTFDEQRTATIMEELADA 135
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y H ++H D+KP N+LL K+ DFG + + S T + G+
Sbjct: 136 LMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS------VHAPSLRRKT--MCGT 184
Query: 635 IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----TH-ESFAGEVSLVKWVESNF 689
+ Y+PPE G + D++ GV+ E+ G P +H E++ V + ++
Sbjct: 185 LDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASV 244
Query: 690 PKNAQQVLDRELRQ 703
P AQ ++ + LR
Sbjct: 245 PTGAQDLISKLLRH 258
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 107 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 156
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 157 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 209
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 210 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 36 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 81
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 82 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 138
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 139 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 195
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 196 EPNVSXICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 244
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 245 DSGVDQLVE 253
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 89 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 138
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 139 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 191
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 192 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 62
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 119
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 177 EPNVSXICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 225
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 226 DSGVDQLVE 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 87
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 88 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 134
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 135 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 182
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 183 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 123 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY--------AA 169
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 170 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 217
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 25 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 70
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 71 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 127
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 128 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 184
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 185 EPNVSXICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 233
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 234 DSGVDQLVE 242
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 29 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 74
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 131
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 132 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 188
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 189 EPNVSXICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 237
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 238 DSGVDQLVE 246
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 95 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 144
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 145 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 197
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 198 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKXQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 89 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 138
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 139 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR---- 191
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 192 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 81 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 130
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 131 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 183
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 184 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 80 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 129
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 130 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 182
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 183 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVK--VLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
IG G+FG V+K R+ G VA+K +++ E G + E + L+ +H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 520 C---SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
C +S + + LV++F + G + K E + + + L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLLNGLY 139
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y+H + I+H D+K N+L+ D K+ DFGLAR+ +Q + V+ ++
Sbjct: 140 YIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLW 194
Query: 637 YIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PPE LGE+ D++ G ++ E++T
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 51 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 96
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 153
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 210
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 211 EPNVSXICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 259
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 260 DSGVDQLVE 268
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 29/214 (13%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNLVKLI-- 517
+GSG++GSV + + G+ VAVK L +S K + E L++ +H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 518 -TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
T SL+ N +L V +G L + + ++ + + + FL I L
Sbjct: 96 FTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQILRGLK 145
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 146 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---------W 193
Query: 637 YIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 29 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 74
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 75 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 131
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 132 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 188
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 189 EPNVSXICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 237
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 238 DSGVDQLVE 246
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 104 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 153
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 154 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 206
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 207 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 461 NLIGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWKSFFAECEALRNTR-HRNLVKLIT 518
L+G G++ V L+ G AVK+++ ++ + F E E L + ++N+++LI
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
F++ LV+E L GS+ I +K +H N E + D+A+ALD+L
Sbjct: 79 F-----FEDDTRFYLVFEKLQGGSILAHI---QKQKH---FNEREASRVVRDVAAALDFL 127
Query: 579 HNDCEVPIVHCDLKPGNILLD--EDMT-AKVGDFGLARSLLERIGNQSSISSTHVLK--- 632
H I H DLKP NIL + E ++ K+ DF L + ++ N + +T L
Sbjct: 128 HTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGM--KLNNSCTPITTPELTTPC 182
Query: 633 GSIGYIPPEY-----GLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
GS Y+ PE D++S GV+L + +G P
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 107 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 156
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 157 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR---- 209
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 210 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 103 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 149
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 197
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 86 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 135
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 136 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 188
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 189 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 103 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 152
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 153 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 205
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 206 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 86 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 135
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 136 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 188
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 189 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 89 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 138
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 139 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 191
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 192 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 82
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 83 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 132
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 133 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 185
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 186 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 86 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 135
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 136 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 188
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 189 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 81
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 82 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 131
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 132 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 184
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 185 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 24/233 (10%)
Query: 457 FSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKL 516
+++ +IG+GSFG V++ L E VA+K + +K+ E + +R +H N+V L
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIK--KVLQDKRFKN--RELQIMRIVKHPNVVDL 97
Query: 517 IT-SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
S+ D K+ FL LV E++ H + + L L +L + + +L
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML--LIKLYM-YQLLRSL 154
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDEDM-TAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
Y+H+ + I H D+KP N+LLD K+ DFG A+ L+ N S I S +
Sbjct: 155 AYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY----- 206
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVE 686
Y PE G T D++S G ++ E+ G F GE + + VE
Sbjct: 207 --YRAPELIFGATNYTTNIDIWSTGCVMAELMQG----QPLFPGESGIDQLVE 253
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 90 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 139
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 140 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 192
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 193 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 103 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--------AA 149
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 197
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 81 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 130
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 131 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 183
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 184 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 91 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 140
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 141 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 193
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 194 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 22 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 67
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 124
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 125 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 181
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 182 EPNVSYICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 230
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 231 DSGVDQLVE 239
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 62
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 119
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 177 EPNVSYICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 225
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 226 DSGVDQLVE 234
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 95 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 144
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 145 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 197
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 198 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 463 IGSGSFGSVYKG-YLRE---GISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVKLI 517
IG G FG V++G Y+ ++VA+K + S + F E +R H ++VKLI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + ++ E G L ++ + L+ + A +++AL Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFLQVRK-----FSLDLASLILYAYQLSTALAY 126
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L + VH D+ N+L+ + K+GDFGL+R + + ++S K I +
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG-----KLPIKW 178
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE + ++A DV+ FGV + EI G+ P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 96 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 145
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 146 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 198
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 199 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 463 IGSGSFGSVYKG-YLRE---GISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVKLI 517
IG G FG V++G Y+ ++VA+K + S + F E +R H ++VKLI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + ++ E G L ++ + + L+ + A +++AL Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 126
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L + VH D+ N+L+ + K+GDFGL+R + + ++S K I +
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-----KLPIKW 178
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE + ++A DV+ FGV + EI G+ P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 96 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 145
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 146 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 198
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 199 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 90 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 139
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 140 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR---- 192
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 193 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 96 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 145
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 146 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 198
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 199 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 123 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 169
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + +T
Sbjct: 170 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---------GATW 217
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 218 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 51 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 96
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 97 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 153
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 210
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 211 EPNVSYICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 259
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 260 DSGVDQLVE 268
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 30 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 75
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 76 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 132
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 133 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 189
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 190 EPNVSYICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 238
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 239 DSGVDQLVE 247
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--R 62
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQ---TL 119
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 177 EPNVSXICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 225
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 226 DSGVDQLVE 234
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--R 62
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 119
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 177 EPNVSYICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 225
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 226 DSGVDQLVE 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 463 IGSGSFGSVYKG-YLRE---GISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVKLI 517
IG G FG V++G Y+ ++VA+K + S + F E +R H ++VKLI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + ++ E G L ++ + + L+ + A +++AL Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 126
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L + VH D+ N+L+ + K+GDFGL+R + + ++S K I +
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-----KLPIKW 178
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE + ++A DV+ FGV + EI G+ P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E+ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+++D+ KV DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 459 HENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
HE L G+G+FG V++ R G + A K + ++ E + + RH LV L
Sbjct: 162 HEEL-GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 220
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ F++ + ++YEF+ G L + + +EH N ++ E + + L +
Sbjct: 221 DA-----FEDDNEMVMIYEFMSGGELFEKV----ADEH-NKMSEDEAVEYMRQVCKGLCH 270
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTA--KVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
+H E VH DLKP NI+ + K+ DFGL L + S V G+
Sbjct: 271 MH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-------QSVKVTTGTA 320
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE-----VSLVKWVESNFP 690
+ PE G+ D++S GV+ + +G+SP F GE + VK + N
Sbjct: 321 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP----FGGENDDETLRNVKSCDWNMD 376
Query: 691 KNAQQVLDRE----LRQLMMSSESQTIQLHDCL 719
+A + + +R+L+++ + + +H L
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL 409
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 96 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 141
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 142 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 198
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 199 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 255
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 256 EPNVSYICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 304
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 305 DSGVDQLVE 313
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 17 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--R 62
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 119
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 120 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 177 EPNVSYICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 225
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 226 DSGVDQLVE 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E+ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+++D+ KV DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 86 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 135
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 136 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR---- 188
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 189 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 463 IGSGSFGSVYKG-YLRE---GISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVKLI 517
IG G FG V++G Y+ ++VA+K + S + F E +R H ++VKLI
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + ++ E G L ++ + + L+ + A +++AL Y
Sbjct: 106 GVITE------NPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 154
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L + VH D+ N+L+ + K+GDFGL+R + + ++S K I +
Sbjct: 155 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-----KLPIKW 206
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE + ++A DV+ FGV + EI G+ P
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 240
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+E + + L ++ G L ++ + +
Sbjct: 63 IVKL------LDVIHTENKLYLVFEHV-HQDLKTFMDASALT--GIPLPLIK--SYLFQL 111
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G + V+
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYTHEVV 164
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 165 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 53 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 98
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 99 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 155
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 156 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 212
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 213 EPNVSYICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 261
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 262 DSGVDQLVE 270
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 55 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 100
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 101 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 157
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 158 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 214
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 215 EPNVSYICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 263
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 264 DSGVDQLVE 272
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 463 IGSGSFGSVYKG-YLRE---GISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVKLI 517
IG G FG V++G Y+ ++VA+K + S + F E +R H ++VKLI
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + ++ E G L ++ + + L+ + A +++AL Y
Sbjct: 80 GVITE------NPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 128
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L + VH D+ N+L+ + K+GDFGL+R + + ++S K I +
Sbjct: 129 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-----KLPIKW 180
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE + ++A DV+ FGV + EI G+ P
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 214
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG--------- 181
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
+ Y PE L + D++S G ++ E+ TG +
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 463 IGSGSFGSVYKG-YLRE---GISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVKLI 517
IG G FG V++G Y+ ++VA+K + S + F E +R H ++VKLI
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + ++ E G L ++ + + L+ + A +++AL Y
Sbjct: 81 GVITE------NPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 129
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L + VH D+ N+L+ + K+GDFGL+R + + ++S K I +
Sbjct: 130 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-----KLPIKW 181
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE + ++A DV+ FGV + EI G+ P
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 215
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 463 IGSGSFGSVYKG-YLRE---GISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVKLI 517
IG G FG V++G Y+ ++VA+K + S + F E +R H ++VKLI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + ++ E G L ++ + + L+ + A +++AL Y
Sbjct: 75 GVITE------NPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 123
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L + VH D+ N+L+ + K+GDFGL+R + + ++S K I +
Sbjct: 124 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-----KLPIKW 175
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE + ++A DV+ FGV + EI G+ P
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 209
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
PQ +SY + + +IG+GSFG VY+ L + G VA+K + +K+
Sbjct: 45 PQEVSYTDTK----------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--R 90
Query: 501 ECEALRNTRHRNLVKL-ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
E + +R H N+V+L SS + K+ +L LV +++ H R + L
Sbjct: 91 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ---TL 147
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLARSLLER 618
+ + +L Y+H+ I H D+KP N+LLD D K+ DFG A+ L+
Sbjct: 148 PVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 204
Query: 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTGMSPTHESFAG 677
N S I S + Y PE G T+ DV+S G +L E+ G F G
Sbjct: 205 EPNVSYICSRY-------YRAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPG 253
Query: 678 EVSLVKWVE 686
+ + + VE
Sbjct: 254 DSGVDQLVE 262
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG--------- 181
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
+ Y PE L + D++S G ++ E+ TG +
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 37/273 (13%)
Query: 459 HENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
HE L G+G+FG V++ R G + A K + ++ E + + RH LV L
Sbjct: 56 HEEL-GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 114
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ F++ + ++YEF+ G L + + +EH N ++ E + + L +
Sbjct: 115 DA-----FEDDNEMVMIYEFMSGGELFEKV----ADEH-NKMSEDEAVEYMRQVCKGLCH 164
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTA--KVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
+H E VH DLKP NI+ + K+ DFGL L + S V G+
Sbjct: 165 MH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-------QSVKVTTGTA 214
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE-----VSLVKWVESNFP 690
+ PE G+ D++S GV+ + +G+SP F GE + VK + N
Sbjct: 215 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP----FGGENDDETLRNVKSCDWNMD 270
Query: 691 KNAQQVLDRE----LRQLMMSSESQTIQLHDCL 719
+A + + +R+L+++ + + +H L
Sbjct: 271 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL 303
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 45/227 (19%)
Query: 457 FSHENLIGSGSFGSVYKG---YLREGISVAVKVLDIESTGTWK-------SFFAECEALR 506
F+ + IG GSFG VYKG + +E VA+K++D+E + ++C++
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKE--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 507 NTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN 566
TR+ + L ++ E+LG GS D + LE
Sbjct: 79 ITRYFG-----------SYLKSTKLWIIMEYLGGGSALDLLKP----------GPLEETY 117
Query: 567 IAI---DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
IA +I LDYLH++ ++ H D+K N+LL E K+ DFG+A L + +
Sbjct: 118 IATILREILKGLDYLHSERKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTD-----T 169
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
I + G+ ++ PE D++S G+ +E+ G P
Sbjct: 170 QIKRNXFV-GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 463 IGSGSFGSVYKG-YLRE---GISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVKLI 517
IG G FG V++G Y+ ++VA+K + S + F E +R H ++VKLI
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + ++ E G L ++ + + L+ + A +++AL Y
Sbjct: 83 GVITE------NPVWIIMELCTLGELRSFLQVRKYS-----LDLASLILYAYQLSTALAY 131
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L + VH D+ N+L+ + K+GDFGL+R + + ++S K I +
Sbjct: 132 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-----KLPIKW 183
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE + ++A DV+ FGV + EI G+ P
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 95 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY--------AA 141
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 142 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 189
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVK--VLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
IG G+FG V+K R+ G VA+K +++ E G + E + L+ +H N+V LI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 520 CSSLDFKNMEF------LALVYEFLGN---GSLGDWIHGERKNEHGNGLNFLERLNIAID 570
C + K + + LV++F + G L + + +E + L
Sbjct: 85 CRT---KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML-------- 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
+ L Y+H + I+H D+K N+L+ D K+ DFGLAR+ +Q + V
Sbjct: 134 -LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 631 LKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
+ ++ Y PPE LGE+ D++ G ++ E++T
Sbjct: 190 V--TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E+ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+++D+ +V DFGLA+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 24/214 (11%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVK--VLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
IG G+FG V+K R+ G VA+K +++ E G + E + L+ +H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 520 C---SSLDFKNMEFLALVYEFLGN---GSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
C +S + + LV++F + G L + + +E + L +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML---------LN 136
Query: 574 ALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKG 633
L Y+H + I+H D+K N+L+ D K+ DFGLAR+ +Q + V+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-- 191
Query: 634 SIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
++ Y PPE LGE+ D++ G ++ E++T
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 31/221 (14%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT---RHRNLVKLITS 519
+G G +G V++G +G +VAVK+ S+ KS+F E E L NT RH N++ I S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETE-LYNTVMLRHENILGFIAS 70
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
+ + + L L+ + GSL D++ L+ + L I + IAS L +LH
Sbjct: 71 DMTSRHSSTQ-LWLITHYHEMGSLYDYLQL-------TTLDTVSCLRIVLSIASGLAHLH 122
Query: 580 NDC-----EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
+ + I H DLK NIL+ ++ + D GLA + + NQ + + + G+
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRV-GT 180
Query: 635 IGYIPPEYGLGEKPSTAG-------DVYSFGVMLLEIFTGM 668
Y+ PE L E D+++FG++L E+ M
Sbjct: 181 KRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 220
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 31/221 (14%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT---RHRNLVKLITS 519
+G G +G V++G +G +VAVK+ S+ KS+F E E L NT RH N++ I S
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETE-LYNTVMLRHENILGFIAS 70
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
+ + + L L+ + GSL D++ L+ + L I + IAS L +LH
Sbjct: 71 DMTSRHSSTQ-LWLITHYHEMGSLYDYLQL-------TTLDTVSCLRIVLSIASGLAHLH 122
Query: 580 NDC-----EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
+ + I H DLK NIL+ ++ + D GLA + + NQ + + + G+
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRV-GT 180
Query: 635 IGYIPPEYGLGEKPSTAG-------DVYSFGVMLLEIFTGM 668
Y+ PE L E D+++FG++L E+ M
Sbjct: 181 KRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 220
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKV--LDIESTGTWKSFFAECEALRNTRHRN 512
NF IG G++G VYK + G VA+K LD E+ G + E L+ H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 513 LVKLITSCSSLDFKNME-FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+VKL LD + E L LV+E + + L ++ G L ++ + +
Sbjct: 67 IVKL------LDVIHTENKLYLVFEHV-DQDLKKFMDASALT--GIPLPLIK--SYLFQL 115
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L + H+ ++H DLKP N+L++ + K+ DFGLAR+ G V+
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF----GVPVRTYXHEVV 168
Query: 632 KGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFT 666
++ Y PE LG K STA D++S G + E+ T
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 47/260 (18%)
Query: 442 PQMISYDE-LRRATGNFSHENLIGSGSFGSVYK------GYLREGISVAVKVLDIESTGT 494
P + Y+E N +G+G+FG V + G + VAVK+L +
Sbjct: 17 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 76
Query: 495 WK-SFFAECEALRNT-RHRNLVKLITSCSS----------------LDFKNMEFLALVYE 536
K + +E + + + +H N+V L+ +C+ L+F + A++
Sbjct: 77 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGP 136
Query: 537 FLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGN 595
L G + + E G L + L+ + +A + +L + +C +H D+ N
Sbjct: 137 SLAPGQDPEGL----DKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARN 188
Query: 596 ILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKPSTA 651
+LL AK+GDFGLAR ++ S +++KG+ + ++ PE +
Sbjct: 189 VLLTNGHVAKIGDFGLARDIMN--------DSNYIVKGNARLPVKWMAPESIFDCVYTVQ 240
Query: 652 GDVYSFGVMLLEIFT-GMSP 670
DV+S+G++L EIF+ G++P
Sbjct: 241 SDVWSYGILLWEIFSLGLNP 260
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 95 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 141
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 142 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 189
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 190 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G VAVK L +S K + E L++ +H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 80 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 129
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + +
Sbjct: 130 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG--------- 177
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
+ Y PE L + D++S G ++ E+ TG +
Sbjct: 178 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 103 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 149
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 197
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 38/231 (16%)
Query: 463 IGSGSFGSVYKG------YLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRNLV 514
+G G+FG V + +VAVK+L +T + ++ +E + L + H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGLNFLER 564
L+ +C+ K L ++ EF G+L ++ +R ++ + + L
Sbjct: 132 NLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+ + +A +++L + +H DL NILL E K+ DFGLAR + +
Sbjct: 188 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK------- 237
Query: 625 ISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 238 -DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRN-- 512
F +G+GSFG V +E G A+K+LD + K R + N
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFP 102
Query: 513 -LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E+ G + + G H A
Sbjct: 103 FLVKL-----EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFY--------AA 149
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ KV DFG A+ + R T
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR---------TW 197
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 31/221 (14%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT---RHRNLVKLITS 519
+G G +G V++G +G +VAVK+ S+ KS+F E E L NT RH N++ I S
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETE-LYNTVMLRHENILGFIAS 99
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
+ + + L L+ + GSL D++ L+ + L I + IAS L +LH
Sbjct: 100 DMTSRHSSTQ-LWLITHYHEMGSLYDYLQL-------TTLDTVSCLRIVLSIASGLAHLH 151
Query: 580 NDC-----EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
+ + I H DLK NIL+ ++ + D GLA + + NQ + + + G+
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRV-GT 209
Query: 635 IGYIPPEYGLGEKPSTAG-------DVYSFGVMLLEIFTGM 668
Y+ PE L E D+++FG++L E+ M
Sbjct: 210 KRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARRM 249
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 108/228 (47%), Gaps = 34/228 (14%)
Query: 463 IGSGSFGSVYKGYL------REGISVAVKVLDIESTGTWKSFFAECEALR-NTRHRNLVK 515
+G FG VYKG+L + +VA+K L ++ G + F LR +H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGN------------GLNFLE 563
L+ + + L++++ + +G L +++ ++ H + L +
Sbjct: 94 LLGVVT-----KDQPLSMIFSYCSHGDLHEFL--VMRSPHSDVGSTDDDRTVKSALEPPD 146
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
+++ IA+ ++YL + +VH DL N+L+ + + K+ D GL R + +
Sbjct: 147 FVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYA--ADYY 201
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ +L I ++ PE + K S D++S+GV+L E+F+ G+ P
Sbjct: 202 KLLGNSLL--PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 75 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MXGTLPYVAP 176
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 237 APLALLHKILVENPSARITIPD 258
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ ++ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL S FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKLEYS-----FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 103 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 149
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 197
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 103 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 149
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 197
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL S FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKLEYS-----FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 123 FLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 169
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 170 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 217
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 33/230 (14%)
Query: 461 NLIGSGSFGSVYKG-YLREG----ISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLV 514
++GSG+FG+VYKG ++ +G I VA+KVL + S K E + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+L+ C + + LV + + G L D + E+ L + LN + IA
Sbjct: 83 RLLGICLT------STVQLVTQLMPYGCLLDHVR-----ENRGRLGSQDLLNWCMQIAKG 131
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL--- 631
+ YL + V +VH DL N+L+ K+ DFGLAR L I T
Sbjct: 132 MSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLL--------DIDETEYHADG 180
Query: 632 -KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEV 679
K I ++ E L + + DV+S+GV + E+ T G P A E+
Sbjct: 181 GKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI 230
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL S FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKLEYS-----FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 38/231 (16%)
Query: 463 IGSGSFGSVYKG------YLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRNLV 514
+G G+FG V + +VAVK+L +T + ++ +E + L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGLNFLER 564
L+ +C+ K L ++ EF G+L ++ +R ++ + + L
Sbjct: 95 NLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+ + +A +++L + +H DL NILL E K+ DFGLAR + +
Sbjct: 151 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK------- 200
Query: 625 ISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 201 -DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 74 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MXGTLPYVAP 175
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDS 235
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 236 APLALLHKILVENPSARITIPD 257
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 74 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MXGTLPYVAP 175
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 236 APLALLHKILVENPSARITIPD 257
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E+ G + + G H A
Sbjct: 103 FLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--------AA 149
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+++D+ KV DFG A+ + R T
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR---------TW 197
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 463 IGSGSFGSVYKG-YLRE---GISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVKLI 517
IG G FG V++G Y+ ++VA+K + S + F E +R H ++VKLI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + ++ E G L ++ + L+ + A +++AL Y
Sbjct: 458 GVITE------NPVWIIMELCTLGELRSFLQVRK-----FSLDLASLILYAYQLSTALAY 506
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L + VH D+ N+L+ + K+GDFGL+R + + ++S K I +
Sbjct: 507 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-----KLPIKW 558
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE + ++A DV+ FGV + EI G+ P
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 34/225 (15%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVK-VLDI--ESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G++G V+K R G VAVK + D ST ++F + H N+V L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL- 75
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
+ L N + LV++++ +H + N L + + + + + YL
Sbjct: 76 --NVLRADNDRDVYLVFDYMETD-----LHAVIR---ANILEPVHKQYVVYQLIKVIKYL 125
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL--LERIGNQSSIS---------- 626
H+ ++H D+KP NILL+ + KV DFGL+RS + R+ N +S
Sbjct: 126 HSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 627 STHVLKGSIG---YIPPEYGLGEKPSTAG-DVYSFGVMLLEIFTG 667
+L + Y PE LG T G D++S G +L EI G
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ D+GLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 38/231 (16%)
Query: 463 IGSGSFGSVYKG------YLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRNLV 514
+G G+FG V + +VAVK+L +T + ++ +E + L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGLNFLER 564
L+ +C+ K L ++ EF G+L ++ +R ++ + + L
Sbjct: 86 NLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+ + +A +++L + +H DL NILL E K+ DFGLAR + +
Sbjct: 142 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK------- 191
Query: 625 ISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 192 -DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 28/223 (12%)
Query: 457 FSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLV 514
F + +G+G+F V + G AVK + ++ G S E LR +H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
L +++ L LV + + G L D R E G F + + I
Sbjct: 84 ALEDI-----YESPNHLYLVMQLVSGGELFD-----RIVEKG----FYTEKDASTLIRQV 129
Query: 575 LDYLHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
LD ++ + IVH DLKP N+L DE+ + DFGL++ +E G+ S +
Sbjct: 130 LDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK--MEGKGDVMSTAC---- 183
Query: 632 KGSIGYIPPEYGLGEKP-STAGDVYSFGVMLLEIFTGMSPTHE 673
G+ GY+ PE L +KP S A D +S GV+ + G P ++
Sbjct: 184 -GTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 224
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 32/225 (14%)
Query: 457 FSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLV 514
+ +++G+G+F V R VA+K + ++ G S E L +H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER--LNIAIDIA 572
L +++ L L+ + + G L D R E G + ER + +
Sbjct: 80 ALDDI-----YESGGHLYLIMQLVSGGELFD-----RIVEKGF---YTERDASRLIFQVL 126
Query: 573 SALDYLHNDCEVPIVHCDLKPGNIL---LDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
A+ YLH+ + IVH DLKP N+L LDED + DFGL++ + + S+ ST
Sbjct: 127 DAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK-----MEDPGSVLSTA 178
Query: 630 VLKGSIGYIPPEYGLGEKP-STAGDVYSFGVMLLEIFTGMSPTHE 673
G+ GY+ PE L +KP S A D +S GV+ + G P ++
Sbjct: 179 C--GTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 38/231 (16%)
Query: 463 IGSGSFGSVYKG------YLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRNLV 514
+G G+FG V + +VAVK+L +T + ++ +E + L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGLNFLER 564
L+ +C+ K L ++ EF G+L ++ +R ++ + + L
Sbjct: 86 NLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+ + +A +++L + +H DL NILL E K+ DFGLAR + +
Sbjct: 142 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK------- 191
Query: 625 ISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 192 -DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKSQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGL R + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 38/231 (16%)
Query: 463 IGSGSFGSVYKG------YLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRNLV 514
+G G+FG V + +VAVK+L +T + ++ +E + L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGLNFLER 564
L+ +C+ K L ++ EF G+L ++ +R ++ + + L
Sbjct: 97 NLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+ + +A +++L + +H DL NILL E K+ DFGLAR + +
Sbjct: 153 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK------- 202
Query: 625 ISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 203 -DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 62/263 (23%)
Query: 442 PQMISYDE-LRRATGNFSHENLIGSGSFGSVYK------GYLREGISVAVKVLDIESTGT 494
P + Y+E N +G+G+FG V + G + VAVK+L +
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 495 WK-SFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERK 552
K + +E + + + +H N+V L+ +C+ + + ++ E+ G L
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACT-----HGGPVLVITEYCCYGDL--------- 137
Query: 553 NEHGNGLNFLER----------LNIAIDIASALDYLHNDCEVP----------IVHCDLK 592
LNFL R IA S D LH +V +H D+
Sbjct: 138 ------LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVA 191
Query: 593 PGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKP 648
N+LL AK+GDFGLAR ++ S +++KG+ + ++ PE
Sbjct: 192 ARNVLLTNGHVAKIGDFGLARDIMN--------DSNYIVKGNARLPVKWMAPESIFDCVY 243
Query: 649 STAGDVYSFGVMLLEIFT-GMSP 670
+ DV+S+G++L EIF+ G++P
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNP 266
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 41/222 (18%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT---RHRNLVKLITS 519
+G G +G V++G L G SVAVK+ +W F E E + NT RH N++ I S
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSW---FRETE-IYNTVLLRHDNILGFIAS 70
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
+ + + L L+ + +GSL D++ + H L +A+ A L +LH
Sbjct: 71 DMTSRNSSTQ-LWLITHYHEHGSLYDFLQRQTLEPHLA-------LRLAVSAACGLAHLH 122
Query: 580 NDC-----EVPIVHCDLKPGNILLDEDMTAKVGDFGLAR-----SLLERIGNQSSISSTH 629
+ + I H D K N+L+ ++ + D GLA S IGN +
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV---- 178
Query: 630 VLKGSIGYIPPEYGLGEKPST-------AGDVYSFGVMLLEI 664
G+ Y+ PE L E+ T D+++FG++L EI
Sbjct: 179 ---GTKRYMAPEV-LDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 463 IGSGSFGSVYK----GYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+G G FG V++ + ++ VKV + K E L RHRN++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKK----EISILNIARHRNILHLHE 68
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
S F++ME L +++EF+ + ER N LN E ++ + AL +L
Sbjct: 69 S-----FESMEELVMIFEFISGLDIF-----ERINTSAFELNEREIVSYVHQVCEALQFL 118
Query: 579 HNDCEVPIVHCDLKPGNILLD--EDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
H+ I H D++P NI+ T K+ +FG AR L + G+ + +L +
Sbjct: 119 HSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL--KPGD-----NFRLLFTAPE 168
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
Y PE + STA D++S G ++ + +G++P
Sbjct: 169 YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 30/219 (13%)
Query: 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
++GSG+F V+ R G A+K + S E L+ +H N+V L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID-IASALDYL 578
+++ LV + + G L D I ER G+ + ++ I + SA+ YL
Sbjct: 75 -----YESTTHYYLVMQLVSGGELFDRI-LER------GVYTEKDASLVIQQVLSAVKYL 122
Query: 579 HNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
H E IVH DLKP N+L +E+ + DFGL++ Q+ I ST G+
Sbjct: 123 H---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM------EQNGIMSTAC--GTP 171
Query: 636 GYIPPEYGLGEKP-STAGDVYSFGVMLLEIFTGMSPTHE 673
GY+ PE L +KP S A D +S GV+ + G P +E
Sbjct: 172 GYVAPEV-LAQKPYSKAVDCWSIGVITYILLCGYPPFYE 209
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 36/229 (15%)
Query: 463 IGSGSFGSVYKG------YLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRNLV 514
+G G+FG V + +VAVK+L +T + ++ +E + L + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER--------KNEHGNGLNFLERLN 566
L+ +C+ K L ++ EF G+L ++ +R ++ + + L +
Sbjct: 97 NLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSIS 626
+ +A +++L + +H DL NILL E K+ DFGLAR + +
Sbjct: 153 YSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXK--------D 201
Query: 627 STHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 108/228 (47%), Gaps = 34/228 (14%)
Query: 463 IGSGSFGSVYKGYL------REGISVAVKVLDIESTGTWKSFFAECEALR-NTRHRNLVK 515
+G FG VYKG+L + +VA+K L ++ G + F LR +H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGN------------GLNFLE 563
L+ + + L++++ + +G L +++ ++ H + L +
Sbjct: 77 LLGVVT-----KDQPLSMIFSYCSHGDLHEFL--VMRSPHSDVGSTDDDRTVKSALEPPD 129
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
+++ IA+ ++YL + +VH DL N+L+ + + K+ D GL R + +
Sbjct: 130 FVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYA--ADYY 184
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ +L I ++ PE + K S D++S+GV+L E+F+ G+ P
Sbjct: 185 KLLGNSLL--PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+++D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE + + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 463 IGSGSFGSVYKG-YLRE---GISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVKLI 517
IG G FG V++G Y+ ++VA+K + S + F E +R H ++VKLI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + ++ E G L ++ + L+ + A +++AL Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFLQVRK-----FSLDLASLILYAYQLSTALAY 126
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L + VH D+ N+L+ K+GDFGL+R + + ++S K I +
Sbjct: 127 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-----KLPIKW 178
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE + ++A DV+ FGV + EI G+ P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E+ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+++D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G VAVK L +S K + E L++ +H N+
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 93
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 94 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 143
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 144 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 196
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 197 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 74 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 175
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 236 APLALLHKILVENPSARITIPD 257
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 31/240 (12%)
Query: 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVL---DIESTGTWKSFFAECEALRNTR 509
+ + + ++G GSFG V + G AVKV+ ++ +S E + L+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 510 HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
H N+ KL F++ + LV E G L D I ++ + ++ I
Sbjct: 85 HPNIXKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKR------FSEVDAARIIR 133
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSIS 626
+ S + Y H + IVH DLKP N+LL+ +D ++ DFGL+ + I
Sbjct: 134 QVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI- 189
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVE 686
G+ YI PE G DV+S GV+L + +G P + A E ++K VE
Sbjct: 190 ------GTAYYIAPEVLHGTYDEKC-DVWSTGVILYILLSGCPPFNG--ANEYDILKKVE 240
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNLVKLI-- 517
+GSG++GSV + + G VAVK L +S K + E L++ +H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 518 -TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
T SL+ N +L V +G L + + ++ + + + FL I L
Sbjct: 96 FTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQILRGLK 145
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 146 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---------W 193
Query: 637 YIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNLVKLI-- 517
+GSG++GSV + + G VAVK L +S K + E L++ +H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 518 -TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
T SL+ N +L V +G L + + ++ + + + FL I L
Sbjct: 110 FTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQILRGLK 159
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 160 YIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR---------W 207
Query: 637 YIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G VAVK L +S K + E L++ +H N+
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 103 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 152
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 153 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 205
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 206 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G VAVK L +S K + E L++ +H N+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 104 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 153
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 154 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 206
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 207 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
L KL FK+ L +V E+ G + + G H A
Sbjct: 103 FLTKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFY--------AA 149
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+++D+ KV DFG A+ + R T
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR---------TW 197
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G VAVK L +S K + E L++ +H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 80 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 129
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 130 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 182
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 183 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
L KL FK+ L +V E+ G + + G H A
Sbjct: 103 FLTKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--------AA 149
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+++D+ KV DFG A+ + R T
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR---------TW 197
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 74 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MXGTLPYVAP 175
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 236 APLALLHKILVENPSARITIPD 257
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVY-KGYLREGISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V ++ G A+K+LD + K E L+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
L KL FK+ L +V E+ G + + G H A
Sbjct: 103 FLTKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY--------AA 149
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+++D+ KV DFG A+ + R T
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR---------TW 197
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ PE L + + A D ++ GV++ E+ G P
Sbjct: 198 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 94/229 (41%), Gaps = 28/229 (12%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVK-VLDIESTGT----------WKS 497
EL ++ + I SGS+G+V G EGI VA+K V + S G K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 498 FFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGN 557
E L + H N++ L + M L LV E L L IH +R
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE-LMRTDLAQVIHDQRIVISPQ 134
Query: 558 GLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLE 617
+ + I L LH E +VH DL PGNILL ++ + DF LAR
Sbjct: 135 HIQYF-----MYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLARE--- 183
Query: 618 RIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTA-GDVYSFGVMLLEIF 665
+ + + TH + Y PE + K T D++S G ++ E+F
Sbjct: 184 ---DTADANKTHYVTHR-WYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 74 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MXGTLPYVAP 175
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 236 APLALLHKILVENPSARITIPD 257
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 36/218 (16%)
Query: 461 NLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAEC-------EALRNTRHRN 512
+IG GSFG V K Y + VA+K++ E K F + E LR N
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDN 157
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNE-HGNGLNFLERLNIAIDI 571
+ +I + F+N + + +E L + +L + I +KN+ G L + + A I
Sbjct: 158 TMNVIHMLENFTFRN--HICMTFELL-SMNLYELI---KKNKFQGFSLPLVRKF--AHSI 209
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA--KVGDFGLARSLLERIGNQSSISSTH 629
LD LH + I+HCDLKP NILL + + KV DFG + +R+ + I S
Sbjct: 210 LQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV--YTXIQSRF 264
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
Y PE LG + D++S G +L E+ TG
Sbjct: 265 -------YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 28/214 (13%)
Query: 463 IGSGSFGSVYKGYLREGIS-VAVKV--LDIESTGTWKSFFAECEALRNTRHRNLVKLITS 519
IG G++G+V+K RE VA+K LD + G S E L+ +H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 520 CSSLDFKNMEFLALVYEFLGNG--SLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
S D K L LV+EF D +G+ E F + L +
Sbjct: 70 LHS-DKK----LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLF--------QLLKGLGF 116
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
H+ ++H DLKP N+L++ + K+ +FGLAR+ G S V+ ++ Y
Sbjct: 117 CHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAF----GIPVRCYSAEVV--TLWY 167
Query: 638 IPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSP 670
PP+ G K ST+ D++S G + E+ P
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 463 IGSGSFGSVYKG------YLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRNLV 514
+G G+FG V + +VAVK+L +T + ++ +E + L + H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER---------KNEHGNGLNFLERL 565
L+ +C+ K L ++ EF G+L ++ +R ++ + + L +
Sbjct: 96 NLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+ +A +++L + +H DL NILL E K+ DFGLAR + +
Sbjct: 152 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXK-------- 200
Query: 626 SSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 463 IGSGSFGSVYKG-YLRE---GISVAVKVL-DIESTGTWKSFFAECEALRNTRHRNLVKLI 517
IG G FG V++G Y+ ++VA+K + S + F E +R H ++VKLI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
+ + ++ E G L ++ + L+ + A +++AL Y
Sbjct: 458 GVITE------NPVWIIMELCTLGELRSFLQVRK-----FSLDLASLILYAYQLSTALAY 506
Query: 578 LHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
L + VH D+ N+L+ K+GDFGL+R + + ++S K I +
Sbjct: 507 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-----KLPIKW 558
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ PE + ++A DV+ FGV + EI G+ P
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 94/229 (41%), Gaps = 28/229 (12%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVK-VLDIESTGT----------WKS 497
EL ++ + I SGS+G+V G EGI VA+K V + S G K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 498 FFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGN 557
E L + H N++ L + M L LV E + L IH +R
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQ 134
Query: 558 GLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLE 617
+ + I L LH E +VH DL PGNILL ++ + DF LAR
Sbjct: 135 HIQYF-----MYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLARE--- 183
Query: 618 RIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTA-GDVYSFGVMLLEIF 665
+ + + TH + Y PE + K T D++S G ++ E+F
Sbjct: 184 ---DTADANKTHYVTHR-WYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 28/233 (12%)
Query: 489 IESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH 548
I+ G + + E L+ H N+VKL+ LD N + L +V+E + G + +
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLV---EVLDDPNEDHLYMVFELVNQGPVMEVPT 130
Query: 549 GERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608
+ +E F D+ ++YLH I+H D+KP N+L+ ED K+ D
Sbjct: 131 LKPLSEDQARFYFQ-------DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIAD 180
Query: 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPS----TAGDVYSFGVMLLEI 664
FG++ E G+ + +S+T G+ ++ PE L E A DV++ GV L
Sbjct: 181 FGVSN---EFKGSDALLSNT---VGTPAFMAPE-SLSETRKIFSGKALDVWAMGVTLYCF 233
Query: 665 FTGMSP-THESFAGEVSLVKWVESNFPKN---AQQVLDRELRQLMMSSESQTI 713
G P E S +K FP A+ + D R L + ES+ +
Sbjct: 234 VFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIV 286
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ Y+ P L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 134/335 (40%), Gaps = 73/335 (21%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKGYLREGIS--VAVKVL---------DIESTGTWKSFF 499
R +F+ ++G GSFG V R+G AVK+L D+E T
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECT------M 68
Query: 500 AECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGN 557
E L + + SC F+ M+ L V E++ G L I G K H
Sbjct: 69 VEKRVLALPGKPPFLTQLHSC----FQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA- 123
Query: 558 GLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLE 617
+ A +IA L +L + I++ DLK N++LD + K+ DFG+ +
Sbjct: 124 -------VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE--- 170
Query: 618 RIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAG 677
N +T G+ YI PE + + D ++FGV+L E+ G +P F G
Sbjct: 171 ---NIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP----FEG 223
Query: 678 EVS---LVKWVESN--FPKNAQQVLDRELRQLMMSSESQTIQLHDC--LITIIESVGLSC 730
E +E N +PK+ MS E+ I C L+T L C
Sbjct: 224 EDEDELFQSIMEHNVAYPKS-------------MSKEAVAI----CKGLMTKHPGKRLGC 266
Query: 731 TTESPGGRIDIRE-ALRRLKNAQKILLKRRQPNEK 764
P G DI+E A R + +K+ K QP K
Sbjct: 267 ---GPEGERDIKEHAFFRYIDWEKLERKEIQPPYK 298
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 36/218 (16%)
Query: 461 NLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAEC-------EALRNTRHRN 512
+IG GSFG V K Y + VA+K++ E K F + E LR N
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDN 157
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNE-HGNGLNFLERLNIAIDI 571
+ +I + F+N + + +E L + +L + I +KN+ G L + + A I
Sbjct: 158 TMNVIHMLENFTFRN--HICMTFELL-SMNLYELI---KKNKFQGFSLPLVRKF--AHSI 209
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA--KVGDFGLARSLLERIGNQSSISSTH 629
LD LH + I+HCDLKP NILL + + KV DFG + +R+ + I S
Sbjct: 210 LQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV--YTXIQSRF 264
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
Y PE LG + D++S G +L E+ TG
Sbjct: 265 -------YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 38/231 (16%)
Query: 463 IGSGSFGSVYKG------YLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRNLV 514
+G G+FG V + +VAVK+L +T + ++ +E + L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGLNFLER 564
L+ +C+ K L ++ EF G+L ++ +R ++ + + L
Sbjct: 95 NLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+ + +A +++L + +H DL NILL E K+ DFGLAR + +
Sbjct: 151 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXK------- 200
Query: 625 ISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 201 -DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 38/231 (16%)
Query: 463 IGSGSFGSVYKG------YLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRNLV 514
+G G+FG V + +VAVK+L +T + ++ +E + L + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGLNFLER 564
L+ +C+ K L ++ EF G+L ++ +R ++ + + L
Sbjct: 95 NLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+ + +A +++L + +H DL NILL E K+ DFGLAR + +
Sbjct: 151 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK------- 200
Query: 625 ISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 201 -DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 75 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 176
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 237 APLALLHKILVENPSARITIPD 258
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 553 NEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612
+E G + I S L++LH + I++ DLKP N+LLD+D ++ D GLA
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L ++ + T G+ G++ PE LGE+ + D ++ GV L E+ P
Sbjct: 337 VEL------KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 74 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 175
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 236 APLALLHKILVENPSARITIPD 257
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 36/231 (15%)
Query: 456 NFSHENLIGSGSFGSVYKGYLREGIS-VAVKVLDIESTGTW---------KSFFAECEAL 505
N+ + ++G G V + + AVK++D+ G++ ++ E + L
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 506 RNTR-HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER 564
R H N+++L + ++ F LV++ + G L D++ + +
Sbjct: 65 RKVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL-----LERI 619
L +++ AL L+ IVH DLKP NILLD+DM K+ DFG + L L +
Sbjct: 120 L---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV 170
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
S + +++ S+ P YG D++S GV++ + G P
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYG------KEVDMWSTGVIMYTLLAGSPP 215
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 40/253 (15%)
Query: 442 PQMISYDE-LRRATGNFSHENLIGSGSFGSVYK------GYLREGISVAVKVLDIESTGT 494
P + Y+E N +G+G+FG V + G + VAVK+L +
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 495 WK-SFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERK 552
K + +E + + + +H N+V L+ +C+ + + ++ E+ G L +++ RK
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACT-----HGGPVLVITEYCCYGDLLNFL--RRK 144
Query: 553 NEHGNGLNFLERLNIAIDIASALDYLHNDCEVP----------IVHCDLKPGNILLDEDM 602
G ++ N ++S D LH +V +H D+ N+LL
Sbjct: 145 RPPGLEYSYNPSHNPEEQLSSR-DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH 203
Query: 603 TAKVGDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFG 658
AK+GDFGLAR ++ S +++KG+ + ++ PE + DV+S+G
Sbjct: 204 VAKIGDFGLARDIMN--------DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 255
Query: 659 VMLLEIFT-GMSP 670
++L EIF+ G++P
Sbjct: 256 ILLWEIFSLGLNP 268
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 553 NEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612
+E G + I S L++LH + I++ DLKP N+LLD+D ++ D GLA
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L ++ + T G+ G++ PE LGE+ + D ++ GV L E+ P
Sbjct: 337 VEL------KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 38/231 (16%)
Query: 463 IGSGSFGSVYKG------YLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRNLV 514
+G G+FG V + +VAVK+L +T + ++ +E + L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGLNFLER 564
L+ +C+ K L ++ EF G+L ++ +R ++ + + L
Sbjct: 86 NLLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+ + +A +++L + +H DL NILL E K+ DFGLAR + +
Sbjct: 142 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXK------- 191
Query: 625 ISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 192 -DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 74 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 175
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 236 APLALLHKILVENPSARITIPD 257
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 73 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 121
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 122 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 174
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 234
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 235 APLALLHKILVENPSARITIPD 256
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 126/313 (40%), Gaps = 56/313 (17%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNLVKLITS 519
IGSG+ G V + GI+VAVK L ++ K + E L+ H+N++ L+
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 520 CSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
+ + + + LV E + + +L IH E +E + L + + + +L
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSYLLY--------QMLCGIKHL 142
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ I+H DLKP NI++ D T K+ DFGLAR+ + + + Y
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRY-------YR 192
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTGM--------------------SPTHESFAGE 678
PE LG + D++S G ++ E+ G +P+ E A
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAAL 252
Query: 679 VSLVKWVESNFPKNAQQVLDRELRQLMMSSESQ-----TIQLHDCLITIIESVGLSCTTE 733
V+ N PK + + SES+ T Q D L ++
Sbjct: 253 QPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKML--------VI 304
Query: 734 SPGGRIDIREALR 746
P RI + EALR
Sbjct: 305 DPDKRISVDEALR 317
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I S L++LH + I++ DLKP N+LLD+D ++ D GLA L ++ + T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL------KAGQTKTKG 348
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ G++ PE LGE+ + D ++ GV L E+ P
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 75 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 176
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 237 APLALLHKILVENPSARITIPD 258
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 553 NEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612
+E G + I S L++LH + I++ DLKP N+LLD+D ++ D GLA
Sbjct: 280 DEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L ++ + T G+ G++ PE LGE+ + D ++ GV L E+ P
Sbjct: 337 VEL------KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 74 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 175
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 236 APLALLHKILVENPSARITIPD 257
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 74 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 175
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 236 APLALLHKILVENPSARITIPD 257
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 74 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 175
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 236 APLALLHKILVENPSARITIPD 257
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 38/231 (16%)
Query: 463 IGSGSFGSVYKG------YLREGISVAVKVLDIESTGT-WKSFFAECEALRNT-RHRNLV 514
+G G+FG V + +VAVK+L +T + ++ +E + L + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGER----------KNEHGNGLNFLER 564
L+ +C+ K L ++ EF G+L ++ +R ++ + + L
Sbjct: 86 NLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
+ + +A +++L + +H DL NILL E K+ DFGLAR + +
Sbjct: 142 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXK------- 191
Query: 625 ISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 192 -DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 30/239 (12%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAE----CE 503
E R +H+ +G GSFG V++ ++ G AVK + +E F AE C
Sbjct: 87 EYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV------FRAEELMACA 140
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLE 563
L + R +V L + + ++ + E L GSLG + + L +L
Sbjct: 141 GLTSPR---IVPLYGA-----VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG 192
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMT-AKVGDFGLARSLLERIGNQ 622
+ A++ L+YLH+ I+H D+K N+LL D + A + DFG A L+ G
Sbjct: 193 Q---ALE---GLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLG 242
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL 681
S+ + + G+ ++ PE LG DV+S M+L + G P + F G + L
Sbjct: 243 KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL 301
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 95/216 (43%), Gaps = 32/216 (14%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDI-----ESTGTWKSFFAECEALRNTRHRNLVKLI 517
+GSG++G V R+ ++ + + I ST + E L+ H N++KL
Sbjct: 45 LGSGAYGEVL--LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
F++ LV E G L D I H N ++ I + S + Y
Sbjct: 103 DF-----FEDKRNYYLVMECYKGGELFDEII------HRMKFNEVDAAVIIKQVLSGVTY 151
Query: 578 LHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
LH IVH DLKP N+LL ++D K+ DFGL+ ++ E NQ + G+
Sbjct: 152 LHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS-AVFE---NQKKMKERL---GT 201
Query: 635 IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
YI PE L +K DV+S GV+L + G P
Sbjct: 202 AYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 75 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 176
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 237 APLALLHKILVENPSARITIPD 258
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 75 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 176
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 237 APLALLHKILVENPSARITIPD 258
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 75 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 176
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 237 APLALLHKILVENPSARITIPD 258
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 36/231 (15%)
Query: 456 NFSHENLIGSGSFGSVYKGYLREGI-SVAVKVLDIESTGTW---------KSFFAECEAL 505
N+ + ++G G V + + AVK++D+ G++ ++ E + L
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 506 RNTR-HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER 564
R H N+++L + ++ F LV++ + G L D++ + +
Sbjct: 78 RKVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL-----LERI 619
L +++ AL L+ IVH DLKP NILLD+DM K+ DFG + L L +
Sbjct: 133 L---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV 183
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
S + +++ S+ P YG D++S GV++ + G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYG------KEVDMWSTGVIMYTLLAGSPP 228
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNLVKLI-- 517
+GSG++GSV R G VA+K L +S K + E L++ +H N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 518 -TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER--LNIAIDIASA 574
T SSL +N LV F+ + GL F E + +
Sbjct: 92 FTPASSL--RNFYDFYLVMPFMQTDL-----------QKIMGLKFSEEKIQYLVYQMLKG 138
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ +VH DLKPGN+ ++ED K+ DFGLAR + + + +V+ +
Sbjct: 139 LKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVV--T 186
Query: 635 IGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G VAVK L +S K + E L++ +H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + + + + + FL
Sbjct: 80 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCAKLTD--DHVQFL-----IYQ 129
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DFGLAR + + +
Sbjct: 130 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR---- 182
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 183 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI--AIDIASALDYLHNDC 582
++ + L LV + G L I+ H F E + A +I L+ LH +
Sbjct: 253 YETKDALCLVLTLMNGGDLKFHIY------HMGQAGFPEARAVFYAAEICCGLEDLHRE- 305
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
IV+ DLKP NILLD+ ++ D GLA + E + + G++GY+ PE
Sbjct: 306 --RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-------GTVGYMAPEV 356
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673
E+ + + D ++ G +L E+ G SP +
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 104/257 (40%), Gaps = 49/257 (19%)
Query: 425 RKGKAKPIGVSTLF-KHSPQMISYDELRRATGNFSHENLIGSGSFGSVYKGY-LREGISV 482
R G K V+ LF K P+ + FS IG GSFG+VY +R V
Sbjct: 34 RAGSLKDPDVAELFFKDDPEKL-----------FSDLREIGHGSFGAVYFARDVRNSEVV 82
Query: 483 AVKVLDI---ESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLG 539
A+K + +S W+ E L+ RH N ++ C + LV E+
Sbjct: 83 AIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY-RGC----YLREHTAWLVMEYC- 136
Query: 540 NGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD---YLHNDCEVPIVHCDLKPGNI 596
GS D + +K L+ + IA AL YLH+ ++H D+K GNI
Sbjct: 137 LGSASDLLEVHKKP--------LQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNI 185
Query: 597 LLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG---D 653
LL E K+GDFG A S ++ + G+ ++ PE L D
Sbjct: 186 LLSEPGLVKLGDFGSA----------SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVD 235
Query: 654 VYSFGVMLLEIFTGMSP 670
V+S G+ +E+ P
Sbjct: 236 VWSLGITCIELAERKPP 252
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNL 513
+GSG F V K RE G+ A K + T + + + E L+ +H N+
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + FL++ I +
Sbjct: 77 ITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILN 125
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTH 629
+ YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNE-----FK 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW- 684
+ G+ ++ PE E D++S GV+ + +G SP T + VS V +
Sbjct: 176 NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E + N + +R+L++ + + + D L
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 123/283 (43%), Gaps = 44/283 (15%)
Query: 454 TGNFSHENLIGSGSFGSVY--KGYLREGISVAVKVLD---IESTGTWKSFFAECEALRNT 508
+ + +GSG++G V K L G A+K++ + +T + E L+
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 509 RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIA 568
H N++KL F++ LV E G L D I +K + +++
Sbjct: 79 DHPNIMKLYEF-----FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQ---- 129
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSI 625
+ S YLH IVH DLKP N+LL+ D K+ DFGL+ +G +
Sbjct: 130 --VLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKE 182
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVS--LVK 683
G+ YI PE L +K DV+S GV+L + G P F G+ ++K
Sbjct: 183 RL-----GTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP----FGGQTDQEILK 232
Query: 684 WVE----SNFPKNAQQVLD--RELRQLMMSSE-SQTIQLHDCL 719
VE S P + QV D ++L +LM++ E S+ I + L
Sbjct: 233 RVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEAL 275
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 74 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 175
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 236 APLALLHKILVENPSARITIPD 257
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 75 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 176
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 237 APLALLHKILVENPSARITIPD 258
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ FGLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 132/272 (48%), Gaps = 39/272 (14%)
Query: 456 NFSHENLIGSGSFGS-VYKGYLREGISVAVKVLDIESTGTWKSFFA--ECEALRNT-RHR 511
+F ++++G G+ G+ VY+G + VAVK + E FA E + LR + H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFS-----FADREVQLLRESDEHP 78
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
N+++ C+ D + +++A+ L +L +++ E+K+ GL E + +
Sbjct: 79 NVIRYF--CTEKD-RQFQYIAIE---LCAATLQEYV--EQKDFAHLGL---EPITLLQQT 127
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDE-----DMTAKVGDFGLARSLLERIGNQSSIS 626
S L +LH+ + IVH DLKP NIL+ + A + DFGL + L +G S S
Sbjct: 128 TSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA--VGRH-SFS 181
Query: 627 STHVLKGSIGYIPPEY---GLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLV 682
+ G+ G+I PE E P+ D++S G + + + G P +S + +++
Sbjct: 182 RRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL 241
Query: 683 ---KWVESNFPKNAQQVLDRELRQLMMSSESQ 711
++ P+ + V+ REL + M++ + Q
Sbjct: 242 LGACSLDCLHPEKHEDVIARELIEKMIAMDPQ 273
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSF---FAECEALRNTRHR 511
F +G+GSFG V +E G A+K+LD + K E L+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGNGLNFLERLNIAI 569
LVKL FK+ L +V E++ G + + G H A
Sbjct: 102 FLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY--------AA 148
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
I +YLH+ + +++ DLKP N+L+D+ +V DFG A+ + R T
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---------TW 196
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
L G+ + PE L + + A D ++ GV++ E+ G P
Sbjct: 197 XLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ D GLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI--AIDIASALDYLHNDC 582
++ + L LV + G L I+ H F E + A +I L+ LH +
Sbjct: 253 YETKDALCLVLTLMNGGDLKFHIY------HMGQAGFPEARAVFYAAEICCGLEDLHRE- 305
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
IV+ DLKP NILLD+ ++ D GLA + E + + G++GY+ PE
Sbjct: 306 --RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-------GTVGYMAPEV 356
Query: 643 GLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673
E+ + + D ++ G +L E+ G SP +
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 22/235 (9%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRN 507
E R +H+ +G GSFG V++ ++ G AVK + +E C L +
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV--EELVACAGLSS 109
Query: 508 TRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI 567
R +V L + + ++ + E L GSLG I L +L +
Sbjct: 110 PR---IVPLYGA-----VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ--- 158
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMT-AKVGDFGLARSLLERIGNQSSIS 626
A++ L+YLH I+H D+K N+LL D + A + DFG A L + G S+
Sbjct: 159 ALE---GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL-QPDGLGKSLL 211
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL 681
+ + G+ ++ PE +G+ D++S M+L + G P + F G + L
Sbjct: 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 266
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 36/231 (15%)
Query: 456 NFSHENLIGSGSFGSVYKGYLREGIS-VAVKVLDIESTGTW---------KSFFAECEAL 505
N+ + ++G G V + + AVK++D+ G++ ++ E + L
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 506 RNTR-HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER 564
R H N+++L + ++ F LV++ + G L D++ + +
Sbjct: 78 RKVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL-----LERI 619
L +++ AL L+ IVH DLKP NILLD+DM K+ DFG + L L +
Sbjct: 133 L---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSV 183
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
S + +++ S+ P YG D++S GV++ + G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYG------KEVDMWSTGVIMYTLLAGSPP 228
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 22/235 (9%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRN 507
E R +H+ +G GSFG V++ ++ G AVK + +E C L +
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV--EELVACAGLSS 125
Query: 508 TRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI 567
R +V L + + ++ + E L GSLG I L +L +
Sbjct: 126 PR---IVPLYGA-----VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ--- 174
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMT-AKVGDFGLARSLLERIGNQSSIS 626
A++ L+YLH I+H D+K N+LL D + A + DFG A L + G S+
Sbjct: 175 ALE---GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL-QPDGLGKSLL 227
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL 681
+ + G+ ++ PE +G+ D++S M+L + G P + F G + L
Sbjct: 228 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 282
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ D GLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNLVKLI-- 517
+GSG++GSV R G VA+K L +S K + E L++ +H N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 518 -TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER--LNIAIDIASA 574
T SSL +N LV F+ + G+ F E + +
Sbjct: 110 FTPASSL--RNFYDFYLVMPFMQTDL-----------QKIMGMEFSEEKIQYLVYQMLKG 156
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ +VH DLKPGN+ ++ED K+ DFGLAR + + + +V+ +
Sbjct: 157 LKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVV--T 204
Query: 635 IGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 116/263 (44%), Gaps = 43/263 (16%)
Query: 463 IGSGSFGSVY--KGYLREGISVAVKVLD---IESTGTWKSFFAECEALRNTRHRNLVKLI 517
+GSG++G V K L G A+K++ + +T + E L+ H N++KL
Sbjct: 12 LGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY 577
F++ LV E G L D I +K + ++ I + S Y
Sbjct: 71 EF-----FEDKRNYYLVMEVYRGGELFDEIILRQK------FSEVDAAVIMKQVLSGTTY 119
Query: 578 LHNDCEVPIVHCDLKPGNILLD---EDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
LH IVH DLKP N+LL+ D K+ DFGL+ +G + G+
Sbjct: 120 LHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERL-----GT 169
Query: 635 IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVS--LVKWVE----SN 688
YI PE L +K DV+S GV+L + G P F G+ ++K VE S
Sbjct: 170 AYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP----FGGQTDQEILKRVEKGKFSF 224
Query: 689 FPKNAQQVLD--RELRQLMMSSE 709
P + QV D ++L +LM++ E
Sbjct: 225 DPPDWTQVSDEAKQLVKLMLTYE 247
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 30/222 (13%)
Query: 461 NLIGSGSFGSVYKGYLREGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLIT 518
LIG G FG VY G R VA++++DIE + K+F E A R TRH N+V +
Sbjct: 39 ELIGKGRFGQVYHG--RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
+C S LA++ +L + + L+ + IA +I + YL
Sbjct: 97 ACMS-----PPHLAIITSLCKGRTLYSVVRDAKIV-----LDVNKTRQIAQEIVKGMGYL 146
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL-ARSLLERIGNQSSISSTHVLKGSIGY 637
H I+H DLK N+ D + DFGL + S + + G + + G + +
Sbjct: 147 HAKG---ILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRRE--DKLRIQNGWLCH 200
Query: 638 IPPEYGLGEKPSTA---------GDVYSFGVMLLEIFTGMSP 670
+ PE P T DV++ G + E+ P
Sbjct: 201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 43/229 (18%)
Query: 463 IGSGSFGSVYKGYLREGIS-VAVKVLDIESTGTWKSFFA--------ECEALRNTRHRNL 513
+GSG+ G V + R+ VA+K++ + A E E L+ H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFLERLNIAIDIA 572
+K+ +F + E +V E + G L D + G +R E L F + L
Sbjct: 78 IKI------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 124
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
A+ YLH E I+H DLKP N+LL +ED K+ DFG ++ L ++S+ T
Sbjct: 125 LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRT- 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAG-----DVYSFGVMLLEIFTGMSPTHE 673
L G+ Y+ PE + TAG D +S GV+L +G P E
Sbjct: 176 -LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 43/229 (18%)
Query: 463 IGSGSFGSVYKGYLREGIS-VAVKVLDIESTGTWKSFFA--------ECEALRNTRHRNL 513
+GSG+ G V + R+ VA+K++ + A E E L+ H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFLERLNIAIDIA 572
+K+ +F + E +V E + G L D + G +R E L F + L
Sbjct: 78 IKI------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 124
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
A+ YLH E I+H DLKP N+LL +ED K+ DFG ++ L ++S+ T
Sbjct: 125 LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRT- 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAG-----DVYSFGVMLLEIFTGMSPTHE 673
L G+ Y+ PE + TAG D +S GV+L +G P E
Sbjct: 176 -LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE--STGTWKSFFAECEALRNTRH 510
+ N+ + +G G+F V + + G+ A K+++ + S ++ E R +H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+V+L S + F LV++ + G L + I + + +++
Sbjct: 88 PNIVRLHDS-----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ------ 136
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDM---TAKVGDFGLARSLLERIGNQSSISS 627
I ++ Y H++ IVH +LKP N+LL K+ DFGLA + N S +
Sbjct: 137 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-----NDSE--A 186
Query: 628 THVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
H G+ GY+ PE + S D+++ GV+L + G P
Sbjct: 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 99/229 (43%), Gaps = 43/229 (18%)
Query: 463 IGSGSFGSVYKGYLREGIS-VAVKVLDIESTGTWKSFFA--------ECEALRNTRHRNL 513
+GSG+ G V + R+ VA+K++ + A E E L+ H +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFLERLNIAIDIA 572
+K+ +F + E +V E + G L D + G +R E L F + L
Sbjct: 77 IKI------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 123
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
A+ YLH E I+H DLKP N+LL +ED K+ DFG ++ L E S
Sbjct: 124 LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-------TSLMR 173
Query: 630 VLKGSIGYIPPEYGLGEKPSTAG-----DVYSFGVMLLEIFTGMSPTHE 673
L G+ Y+ PE + TAG D +S GV+L +G P E
Sbjct: 174 TLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 23/209 (11%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNLVKLITS 519
IGSG+ G V + GI+VAVK L ++ K + E L+ H+N++ L+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 520 CSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
+ + + + LV E + + +L IH E +E + L + + + +L
Sbjct: 90 FTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSYLLY--------QMLCGIKHL 140
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ I+H DLKP NI++ D T K+ DFGLAR+ + + + + +V+ + Y
Sbjct: 141 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----ASTNFMMTPYVV--TRYYR 190
Query: 639 PPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
PE LG D++S G ++ E+ G
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 36/269 (13%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCS 521
+GSG+FG V++ + G K ++ + E + H L+ L +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA-- 116
Query: 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND 581
F++ + L+ EFL G L D I E ++ E +N L ++H
Sbjct: 117 ---FEDKYEMVLILEFLSGGELFDRIAAE-----DYKMSEAEVINYMRQACEGLKHMH-- 166
Query: 582 CEVPIVHCDLKPGNILLD--EDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIP 639
E IVH D+KP NI+ + + + K+ DFGLA L N I V + +
Sbjct: 167 -EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL-----NPDEI--VKVTTATAEFAA 218
Query: 640 PEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL-----VKWVESNFPKNAQ 694
PE E D+++ GV+ + +G+SP FAGE L VK + F ++A
Sbjct: 219 PEIVDREPVGFYTDMWAIGVLGYVLLSGLSP----FAGEDDLETLQNVKRCDWEFDEDAF 274
Query: 695 QVLDRE----LRQLMMSSESQTIQLHDCL 719
+ E ++ L+ + + +HD L
Sbjct: 275 SSVSPEAKDFIKNLLQKEPRKRLTVHDAL 303
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G++G V R +VAVK++D++ + ++ E H N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 75 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 124 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 176
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 237 APLALLHKILVENPSARITIPD 258
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNL 513
+GSG F V K RE G+ A K + T + + + E L+ +H N+
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + FL++ I +
Sbjct: 77 ITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILN 125
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTH 629
+ YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFK----- 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW- 684
+ G+ ++ PE E D++S GV+ + +G SP T + VS V +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E + N + +R+L++ + + + D L
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNL 513
+GSG F V K RE G+ A K + T + + + E L+ +H N+
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + FL++ I +
Sbjct: 77 ITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILN 125
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTH 629
+ YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFK----- 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW- 684
+ G+ ++ PE E D++S GV+ + +G SP T + VS V +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E + N + +R+L++ + + + D L
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G+ VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ D GLAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 38/217 (17%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVK-VLDIESTGTWKSF-FAECEALRNTRHRNLVKLITS 519
IG GS+G V+K R+ G VA+K L+ E K E L+ +H NLV L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
F+ L LV+E+ + L H + + G + ++ +I A+++ H
Sbjct: 71 -----FRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVK--SITWQTLQAVNFCH 119
Query: 580 -NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL-------ERIGNQSSISSTHVL 631
++C +H D+KP NIL+ + K+ DFG AR L + + + S +L
Sbjct: 120 KHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR-WYRSPELL 174
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGM 668
G Y PP DV++ G + E+ +G+
Sbjct: 175 VGDTQYGPP-----------VDVWAIGCVFAELLSGV 200
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 134/333 (40%), Gaps = 69/333 (20%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKGYLREGIS--VAVKVL---------DIESTGTWKSFF 499
R +F+ ++G GSFG V R+G AVK+L D+E T
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECT------M 389
Query: 500 AECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIH--GERKNEHGN 557
E L + + SC F+ M+ L V E++ G L I G K H
Sbjct: 390 VEKRVLALPGKPPFLTQLHSC----FQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA- 444
Query: 558 GLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLE 617
+ A +IA L +L + I++ DLK N++LD + K+ DFG+ +
Sbjct: 445 -------VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE--- 491
Query: 618 RIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAG 677
N +T G+ YI PE + + D ++FGV+L E+ G +P F G
Sbjct: 492 ---NIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP----FEG 544
Query: 678 EVS---LVKWVESN--FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTT 732
E +E N +PK+ MS E+ + + L+T L C
Sbjct: 545 EDEDELFQSIMEHNVAYPKS-------------MSKEA--VAICKGLMTKHPGKRLGC-- 587
Query: 733 ESPGGRIDIRE-ALRRLKNAQKILLKRRQPNEK 764
P G DI+E A R + +K+ K QP K
Sbjct: 588 -GPEGERDIKEHAFFRYIDWEKLERKEIQPPYK 619
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNL 513
+GSG F V K RE G+ A K + T + + + E L+ +H N+
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + FL++ I +
Sbjct: 77 ITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILN 125
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTH 629
+ YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFK----- 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW- 684
+ G+ ++ PE E D++S GV+ + +G SP T + VS V +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E + N + +R+L++ + + + D L
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 22/235 (9%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRN 507
E R +H+ +G GSFG V++ ++ G AVK + +E C L +
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV--EELVACAGLSS 123
Query: 508 TRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI 567
R +V L + + ++ + E L GSLG I L +L +
Sbjct: 124 PR---IVPLYGA-----VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ--- 172
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMT-AKVGDFGLARSLLERIGNQSSIS 626
L+YLH I+H D+K N+LL D + A + DFG A L + G S+
Sbjct: 173 ---ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL-QPDGLGKSLL 225
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL 681
+ + G+ ++ PE +G+ D++S M+L + G P + F G + L
Sbjct: 226 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL 280
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 43/229 (18%)
Query: 463 IGSGSFGSVYKGYLREGIS-VAVKVLDIESTGTWKSFFA--------ECEALRNTRHRNL 513
+GSG+ G V + R+ VA+K++ + A E E L+ H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFLERLNIAIDIA 572
+K+ +F + E +V E + G L D + G +R E L F + L
Sbjct: 78 IKI------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 124
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
A+ YLH E I+H DLKP N+LL +ED K+ DFG ++ L ++S+ T
Sbjct: 125 LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-----GETSLMRT- 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAG-----DVYSFGVMLLEIFTGMSPTHE 673
L G+ Y+ PE + TAG D +S GV+L +G P E
Sbjct: 176 -LCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 9/273 (3%)
Query: 119 GEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILT-EIGQL 177
E+P + LS L KL + N+F S SLT L++ N+ E+ T + L
Sbjct: 291 SELPSGLVGLS-TLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENL 349
Query: 178 QELQSLDLAGNQI--SGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSN 235
+ L+ LDL+ + I S L NL L ++LS NE S +F L +DL+
Sbjct: 350 ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAF 409
Query: 236 NKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGL-SGNL--P 292
+L + L ++NLS + LD + + L + ++L N GN+
Sbjct: 410 TRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKT 469
Query: 293 NSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSL 352
NS + LE L+++ S + LK + +DLS N+L+ S L +L+ + L
Sbjct: 470 NSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIY-L 528
Query: 353 NLTFNNLEGVVPR-EGIFRHTSMVHLEGNPKLC 384
NL N++ ++P I ++L NP C
Sbjct: 529 NLASNHISIILPSLLPILSQQRTINLRQNPLDC 561
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 115/260 (44%), Gaps = 45/260 (17%)
Query: 45 GSLHNLTNIQIIRMAHNLLEGT--VPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLT 102
G L NL N++ + ++H+ +E + L NL L+ N+ +N E LS T
Sbjct: 344 GCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYN-------EPLSLKTE-- 394
Query: 103 NSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTS-IGRLRSLTLLNL 161
AF E P+ L L + R K S L L +LNL
Sbjct: 395 --------AF------KECPQ--------LELLDLAFTRLKVKDAQSPFQNLHLLKVLNL 432
Query: 162 SYN--SISGEILTEIGQLQELQSLDLAGNQI-SGSI--PNTLGNLKKLNQIDLSGNELAS 216
S++ IS E L L LQ L+L GN G+I N+L L +L + LS +L+S
Sbjct: 433 SHSLLDISSEQL--FDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS 490
Query: 217 EIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTI-VNLSKNFLDGTLPEEIGMLG 275
+F + + + +DLS+N+L + I +LS L I +NL+ N + LP + +L
Sbjct: 491 IDQHAFTSLKMMNHVDLSHNRLTSS---SIEALSHLKGIYLNLASNHISIILPSLLPILS 547
Query: 276 NVVTIDLSANGLSGNLPNSF 295
TI+L N L N +
Sbjct: 548 QQRTINLRQNPLDCTCSNIY 567
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 99/229 (43%), Gaps = 43/229 (18%)
Query: 463 IGSGSFGSVYKGYLREGIS-VAVKVLDIESTGTWKSFFA--------ECEALRNTRHRNL 513
+GSG+ G V + R+ VA+K++ + A E E L+ H +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFLERLNIAIDIA 572
+K+ +F + E +V E + G L D + G +R E L F + L
Sbjct: 84 IKI------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 130
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
A+ YLH E I+H DLKP N+LL +ED K+ DFG ++ L E S
Sbjct: 131 LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-------TSLMR 180
Query: 630 VLKGSIGYIPPEYGLGEKPSTAG-----DVYSFGVMLLEIFTGMSPTHE 673
L G+ Y+ PE + TAG D +S GV+L +G P E
Sbjct: 181 TLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 36/218 (16%)
Query: 461 NLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAEC-------EALRNTRHRN 512
+IG G FG V K Y + VA+K++ E K F + E LR N
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDN 157
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNE-HGNGLNFLERLNIAIDI 571
+ +I + F+N + + +E L + +L + I +KN+ G L + + A I
Sbjct: 158 TMNVIHMLENFTFRN--HICMTFELL-SMNLYELI---KKNKFQGFSLPLVRKF--AHSI 209
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA--KVGDFGLARSLLERIGNQSSISSTH 629
LD LH + I+HCDLKP NILL + + KV DFG + +R+ +
Sbjct: 210 LQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV---------Y 257
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
S Y PE LG + D++S G +L E+ TG
Sbjct: 258 XXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 116/273 (42%), Gaps = 45/273 (16%)
Query: 457 FSHENLIGSGSFGSVYKGYLREG--ISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLV 514
++ EN IG GS+G V K +++G I A K + F E E +++ H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+L + F++ + LV E G L + + +R + ++ D+ SA
Sbjct: 70 RLYET-----FEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMK------DVLSA 118
Query: 575 LDYLHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLA------RSLLERIGNQSSI 625
+ Y H ++ + H DLKP N L D K+ DFGLA + + ++G +
Sbjct: 119 VAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYV 175
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL-VKW 684
S VL+G G PE D +S GVM+ + G P EV L ++
Sbjct: 176 SP-QVLEGLYG---PE----------CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 221
Query: 685 VESNFPK----NAQQVLDRELRQLMMSSESQTI 713
FP+ N + +R+L+ S Q I
Sbjct: 222 GTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRI 254
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 37/273 (13%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNLVK 515
+GSG F V K + G+ A K + T + + + E L+ +H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L ++N + L+ E + G L D++ + FL++ I + +
Sbjct: 79 LHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILNGV 127
Query: 576 DYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTHVL 631
YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+ +
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNE-----FKNI 177
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW-VE 686
G+ ++ PE E D++S GV+ + +G SP T + VS V + E
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE 237
Query: 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
+ N + +R+L++ + + + D L
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNL 513
+GSG F V K RE G+ A K + T + + + E L+ +H N+
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + FL++ I +
Sbjct: 77 ITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILN 125
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTH 629
+ YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFK----- 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW- 684
+ G+ ++ PE E D++S GV+ + +G SP T + VS V +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E + N + +R+L++ + + + D L
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNL 513
+GSG F V K RE G+ A K + T + + + E L+ +H N+
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + FL++ I +
Sbjct: 77 ITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILN 125
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTH 629
+ YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFK----- 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW- 684
+ G+ ++ PE E D++S GV+ + +G SP T + VS V +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E + N + +R+L++ + + + D L
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 30/239 (12%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAE----CE 503
E R +H+ +G GSFG V++ ++ G AVK + +E F AE C
Sbjct: 68 EYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEV------FRAEELMACA 121
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLE 563
L + R +V L + + ++ + E L GSLG + + L +L
Sbjct: 122 GLTSPR---IVPLYGA-----VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG 173
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMT-AKVGDFGLARSLLERIGNQ 622
+ A++ L+YLH+ I+H D+K N+LL D + A + DFG A L+ G
Sbjct: 174 Q---ALE---GLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLG 223
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL 681
+ + + G+ ++ PE LG DV+S M+L + G P + F G + L
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCL 282
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 93/224 (41%), Gaps = 37/224 (16%)
Query: 457 FSHENLIGSGSFGSVYKGY-LREGISVAVKVLDI---ESTGTWKSFFAECEALRNTRHRN 512
FS IG GSFG+VY +R VA+K + +S W+ E L+ RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 513 LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
++ C + LV E+ GS D + +K L+ + IA
Sbjct: 77 TIQY-RGC----YLREHTAWLVMEYCL-GSASDLLEVHKKP--------LQEVEIAAVTH 122
Query: 573 SALD---YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
AL YLH+ ++H D+K GNILL E K+GDFG A S ++ +
Sbjct: 123 GALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSA----------SIMAPAN 169
Query: 630 VLKGSIGYIPPEYGLGEKPSTAG---DVYSFGVMLLEIFTGMSP 670
G+ ++ PE L DV+S G+ +E+ P
Sbjct: 170 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNL 513
+GSG F V K RE G+ A K + T + + + E L+ +H N+
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + FL++ I +
Sbjct: 77 ITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILN 125
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTH 629
+ YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFK----- 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW- 684
+ G+ ++ PE E D++S GV+ + +G SP T + VS V +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E + N + +R+L++ + + + D L
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNL 513
+GSG F V K RE G+ A K + T + + + E L+ +H N+
Sbjct: 18 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + FL++ I +
Sbjct: 76 ITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILN 124
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTH 629
+ YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+
Sbjct: 125 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFK----- 174
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW- 684
+ G+ ++ PE E D++S GV+ + +G SP T + VS V +
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E + N + +R+L++ + + + D L
Sbjct: 235 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 269
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNL 513
+GSG F V K RE G+ A K + T + + + E L+ +H N+
Sbjct: 18 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + FL++ I +
Sbjct: 76 ITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILN 124
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTH 629
+ YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+
Sbjct: 125 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFK----- 174
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW- 684
+ G+ ++ PE E D++S GV+ + +G SP T + VS V +
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E + N + +R+L++ + + + D L
Sbjct: 235 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 269
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 116/273 (42%), Gaps = 45/273 (16%)
Query: 457 FSHENLIGSGSFGSVYKGYLREG--ISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLV 514
++ EN IG GS+G V K +++G I A K + F E E +++ H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+L + F++ + LV E G L + + +R + ++ D+ SA
Sbjct: 87 RLYET-----FEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMK------DVLSA 135
Query: 575 LDYLHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLA------RSLLERIGNQSSI 625
+ Y H ++ + H DLKP N L D K+ DFGLA + + ++G +
Sbjct: 136 VAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYV 192
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL-VKW 684
S VL+G G PE D +S GVM+ + G P EV L ++
Sbjct: 193 SP-QVLEGLYG---PE----------CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 238
Query: 685 VESNFPK----NAQQVLDRELRQLMMSSESQTI 713
FP+ N + +R+L+ S Q I
Sbjct: 239 GTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRI 271
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE--STGTWKSFFAECEALRNTRH 510
+ N+ + +G G+F V + + G+ A K+++ + S ++ E R +H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+V+L S + F LV++ + G L + I + + +++
Sbjct: 65 PNIVRLHDS-----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ------ 113
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDM---TAKVGDFGLARSLLERIGNQSSISS 627
I ++ Y H++ IVH +LKP N+LL K+ DFGLA + N S +
Sbjct: 114 ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-----NDSE--A 163
Query: 628 THVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
H G+ GY+ PE + S D+++ GV+L + G P
Sbjct: 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNL 513
+GSG F V K RE G+ A K + T + + + E L+ +H N+
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + FL++ I +
Sbjct: 77 ITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILN 125
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTH 629
+ YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFK----- 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW- 684
+ G+ ++ PE E D++S GV+ + +G SP T + VS V +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E + N + +R+L++ + + + D L
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNL 513
+GSG F V K RE G+ A K + T + + + E L+ +H N+
Sbjct: 19 LGSGKFAVVKK--CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + FL++ I +
Sbjct: 77 ITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILN 125
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTH 629
+ YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFK----- 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW- 684
+ G+ ++ PE E D++S GV+ + +G SP T + VS V +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E + N + +R+L++ + + + D L
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 459 HENL--IGSGSFGSVYKGY-LREGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNL 513
++NL +GSG++GSV + + G VAVK L +S K + E L++ +H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ N +L V +G L + + ++ + + + FL
Sbjct: 84 IGLLDVFTPARSLEEFNDVYL--VTHLMG-ADLNNIVKCQKLTD--DHVQFL-----IYQ 133
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
I L Y+H+ I+H DLKP N+ ++ED K+ DF LAR + + +
Sbjct: 134 ILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR---- 186
Query: 631 LKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ TG +
Sbjct: 187 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE--STGTWKSFFAECEALRNTRH 510
+ N+ + +G G+F V + + G+ A K+++ + S ++ E R +H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+V+L S + F LV++ + G L + I + + +++
Sbjct: 65 PNIVRLHDS-----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ------ 113
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDM---TAKVGDFGLARSLLERIGNQSSISS 627
I ++ Y H++ IVH +LKP N+LL K+ DFGLA + N S +
Sbjct: 114 ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-----NDSE--A 163
Query: 628 THVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
H G+ GY+ PE + S D+++ GV+L + G P
Sbjct: 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE--STGTWKSFFAECEALRNTRH 510
+ N+ + +G G+F V + + G+ A K+++ + S ++ E R +H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
N+V+L S + F LV++ + G L + I + + +++
Sbjct: 64 PNIVRLHDS-----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ------ 112
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDM---TAKVGDFGLARSLLERIGNQSSISS 627
I ++ Y H++ IVH +LKP N+LL K+ DFGLA + N S +
Sbjct: 113 ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV-----NDSE--A 162
Query: 628 THVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
H G+ GY+ PE + S D+++ GV+L + G P
Sbjct: 163 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 25/262 (9%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSC 520
+G G+ G V R +VAVK++D++ + ++ E + H N+VK
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
N+++L L E+ G L D I + + F +L + + YLH
Sbjct: 74 RE---GNIQYLFL--EYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 581 DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPP 640
+ I H D+KP N+LLDE K+ DFGLA R N+ + + + G++ Y+ P
Sbjct: 123 ---IGITHRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNK--MCGTLPYVAP 175
Query: 641 E-YGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699
E E + DV+S G++L + G P + W E N + +D
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
Query: 700 E----LRQLMMSSESQTIQLHD 717
L ++++ + S I + D
Sbjct: 236 APLALLHKILVENPSARITIPD 257
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 463 IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI-- 517
+GSG++GSV Y LR+ ++V +S + + E L++ +H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 518 -TSCSSL-DFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
T +S+ DF + LV +G L + + + +EH L + +
Sbjct: 96 FTPATSIEDFSE---VYLVTTLMG-ADLNNIVKSQALSDEHVQFLVY--------QLLRG 143
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ I+H DLKP N+ ++ED ++ DFGLAR E + +
Sbjct: 144 LKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-------- 192
Query: 635 IGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ G +
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 41/229 (17%)
Query: 461 NLIGSGSFGSVYKGYLRE-GISVAVKVLDIE--------STGTWKSFFAECEALRNTRHR 511
+IG G+F V + RE G AVK++D+ ST K + C L+ H
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK---HP 86
Query: 512 NLVKLITSCSS-----LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN 566
++V+L+ + SS + F+ M+ L +E + G +++ E H ++ +
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAG-FVYSEAVASH-----YMRQ-- 138
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQS 623
I AL Y H++ I+H D+KP N+LL + K+GDFG+A L G
Sbjct: 139 ----ILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL----GESG 187
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
++ V G+ ++ PE E DV+ GV+L + +G P +
Sbjct: 188 LVAGGRV--GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY 234
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNL 513
+GSG F V K RE G+ A K + T + + + E L+ +H N+
Sbjct: 19 LGSGVFAVVKK--CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + FL++ I +
Sbjct: 77 ITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILN 125
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTH 629
+ YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFK----- 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW- 684
+ G+ ++ PE E D++S GV+ + +G SP T + VS V +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E + N + +R+L++ + + + D L
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 107/238 (44%), Gaps = 13/238 (5%)
Query: 138 GGNRFYGKIPTSIGRLRSLTLLNLSYNSISGE---ILTEIGQLQELQSLDLAGNQISGSI 194
GGN F S L SL L+LS N +S + ++ G + L+ LDL+ N +
Sbjct: 361 GGNAF------SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTI-SLKYLDLSFNGVITMS 413
Query: 195 PNTLGNLKKLNQIDLSGNELASEIPTS-FGNFQNLLSIDLSNNKLNGNIPKEILSLSSLT 253
N LG L++L +D + L S F + +NL+ +D+S+ LSSL
Sbjct: 414 SNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLE 472
Query: 254 TIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSG 313
+ +F + LP+ L N+ +DLS L P +F + SL+ L M++N F
Sbjct: 473 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 532
Query: 314 PIPNILAELKGLEVLDLSSNKLSGSIPSDLQNL-RALRSLNLTFNNLEGVVPREGIFR 370
L L+VLD S N + S +LQ+ +L LNLT N+ + +
Sbjct: 533 LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQ 590
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 24/178 (13%)
Query: 181 QSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNG 240
Q ++L +I ++P + NL DLS N L SF +F L +DLS ++
Sbjct: 37 QCMELNFYKIPDNLPFSTKNL------DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT 90
Query: 241 NIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGM--------LGNVVTIDLSANGLSGNLP 292
SLS L+T++ L G + + + L +V ++ + L N P
Sbjct: 91 IEDGAYQSLSHLSTLI------LTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE-NFP 143
Query: 293 NSFKNCKSLEKLLMANNKF-SGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRAL 349
+ K+L++L +A+N S +P + L LE LDLSSNK+ +DL+ L +
Sbjct: 144 --IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 199
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 9/173 (5%)
Query: 121 IPESIGNLSNVLSKL-YMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQE 179
IPES V+ + Y + KIP ++ S L+LS+N + E
Sbjct: 20 IPESWEPCVEVVPNITYQCMELNFYKIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPE 77
Query: 180 LQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSF---GNFQNLLSIDLSNN 236
LQ LDL+ +I +L L+ + L+GN + S +F + Q L++++ +
Sbjct: 78 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA 137
Query: 237 KLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSG 289
L + +L L NL ++F LPE L N+ +DLS+N +
Sbjct: 138 SLENFPIGHLKTLKELNVAHNLIQSF---KLPEYFSNLTNLEHLDLSSNKIQS 187
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 463 IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI-- 517
+GSG++GSV Y LR+ ++V +S + + E L++ +H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 518 -TSCSSL-DFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
T +S+ DF + LV +G L + + + +EH L + +
Sbjct: 88 FTPATSIEDFSE---VYLVTTLMG-ADLNNIVKCQALSDEHVQFLVY--------QLLRG 135
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ I+H DLKP N+ ++ED ++ DFGLAR E + +
Sbjct: 136 LKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-------- 184
Query: 635 IGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ G +
Sbjct: 185 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 43/229 (18%)
Query: 463 IGSGSFGSVYKGYLREGIS-VAVKVLDIESTGTWKSFFA--------ECEALRNTRHRNL 513
+GSG+ G V + R+ VA++++ + A E E L+ H +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFLERLNIAIDIA 572
+K+ +F + E +V E + G L D + G +R E L F + L
Sbjct: 217 IKI------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 263
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
A+ YLH E I+H DLKP N+LL +ED K+ DFG ++ L E S
Sbjct: 264 LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-------TSLMR 313
Query: 630 VLKGSIGYIPPEYGLGEKPSTAG-----DVYSFGVMLLEIFTGMSPTHE 673
L G+ Y+ PE + TAG D +S GV+L +G P E
Sbjct: 314 TLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFA------ECEALRNTRHRNL 513
+GSG F V K RE G+ A K + T + + + E L+ +H N+
Sbjct: 19 LGSGQFAVVKK--CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + FL++ I +
Sbjct: 77 ITLHEV-----YENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQ------ILN 125
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMTA---KVGDFGLARSLLERIGNQSSISSTH 629
+ YLH+ + I H DLKP NI LLD ++ K+ DFGLA + GN+
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFK----- 175
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW- 684
+ G+ ++ PE E D++S GV+ + +G SP T + VS V +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
E + N + +R+L++ + + + D L
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 463 IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI-- 517
+GSG++GSV Y LR+ ++V +S + + E L++ +H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 518 -TSCSSL-DFKNMEFLALVYEFLGNGSLGDWIHGER-KNEHGNGLNFLERLNIAIDIASA 574
T +S+ DF + LV +G L + + + +EH L + +
Sbjct: 96 FTPATSIEDFSE---VYLVTTLMG-ADLNNIVKCQALSDEHVQFLVY--------QLLRG 143
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ I+H DLKP N+ ++ED ++ DFGLAR E + +
Sbjct: 144 LKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-------- 192
Query: 635 IGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMS 669
Y PE L + D++S G ++ E+ G +
Sbjct: 193 -WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 103/237 (43%), Gaps = 11/237 (4%)
Query: 138 GGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQL--QELQSLDLAGNQISGSIP 195
GGN F S L SL L+LS N +S + L+ LDL+ N +
Sbjct: 337 GGNAF------SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS 390
Query: 196 NTLGNLKKLNQIDLSGNELASEIPTS-FGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTT 254
N LG L++L +D + L S F + +NL+ +D+S+ LSSL
Sbjct: 391 NFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449
Query: 255 IVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGP 314
+ +F + LP+ L N+ +DLS L P +F + SL+ L M++N F
Sbjct: 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSL 509
Query: 315 IPNILAELKGLEVLDLSSNKLSGSIPSDLQNL-RALRSLNLTFNNLEGVVPREGIFR 370
L L+VLD S N + S +LQ+ +L LNLT N+ + +
Sbjct: 510 DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQ 566
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 24/178 (13%)
Query: 181 QSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNG 240
Q ++L +I ++P + NL DLS N L SF +F L +DLS ++
Sbjct: 13 QCMELNFYKIPDNLPFSTKNL------DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT 66
Query: 241 NIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGM--------LGNVVTIDLSANGLSGNLP 292
SLS L+T++ L G + + + L +V ++ + L N P
Sbjct: 67 IEDGAYQSLSHLSTLI------LTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE-NFP 119
Query: 293 NSFKNCKSLEKLLMANNKF-SGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRAL 349
+ K+L++L +A+N S +P + L LE LDLSSNK+ +DL+ L +
Sbjct: 120 --IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 159 LNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEI 218
L+LS+N + ELQ LDL+ +I +L L+ + L+GN + S
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 219 PTSF---GNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLG 275
+F + Q L++++ + L + +L L NL ++F LPE L
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF---KLPEYFSNLT 149
Query: 276 NVVTIDLSANGLSG 289
N+ +DLS+N +
Sbjct: 150 NLEHLDLSSNKIQS 163
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 92/226 (40%), Gaps = 26/226 (11%)
Query: 133 SKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGN-QIS 191
++++ GNR S R+LT+L L N ++ L L+ LDL+ N Q+
Sbjct: 34 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 93
Query: 192 GSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSS 251
P T L +L+ + L L P F L + L +N L +P +
Sbjct: 94 SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDD------ 146
Query: 252 LTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKF 311
F D LGN+ + L N +S +F+ SL++LL+ N+
Sbjct: 147 ---------TFRD---------LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 188
Query: 312 SGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFN 357
+ P+ +L L L L +N LS L LRAL+ L L N
Sbjct: 189 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 43/229 (18%)
Query: 463 IGSGSFGSVYKGYLREGIS-VAVKVLDIESTGTWKSFFA--------ECEALRNTRHRNL 513
+GSG+ G V + R+ VA++++ + A E E L+ H +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFLERLNIAIDIA 572
+K+ +F + E +V E + G L D + G +R E L F + L
Sbjct: 203 IKI------KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML------- 249
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
A+ YLH E I+H DLKP N+LL +ED K+ DFG ++ L E S
Sbjct: 250 LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-------TSLMR 299
Query: 630 VLKGSIGYIPPEYGLGEKPSTAG-----DVYSFGVMLLEIFTGMSPTHE 673
L G+ Y+ PE + TAG D +S GV+L +G P E
Sbjct: 300 TLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 90/212 (42%), Gaps = 35/212 (16%)
Query: 469 GSVYKGYLREGISVAVKVLDIESTGTWKS--FFAECEALRNTRHRNLVKLITSCSSLDFK 526
G ++KG +G + VKVL + T KS F EC LR H N++ ++ +C S
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS---P 79
Query: 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFL----ERLNIAIDIASALDYLHNDC 582
L+ + GSL + +H G NF+ + + A+D A +LH
Sbjct: 80 PAPHPTLITHWXPYGSLYNVLH--------EGTNFVVDQSQAVKFALDXARGXAFLHT-L 130
Query: 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642
E I L ++ +DED TA++ + S QS + ++ PE
Sbjct: 131 EPLIPRHALNSRSVXIDEDXTARISXADVKFSF------QSPGRXY-----APAWVAPE- 178
Query: 643 GLGEKPS----TAGDVYSFGVMLLEIFTGMSP 670
L +KP + D +SF V+L E+ T P
Sbjct: 179 ALQKKPEDTNRRSADXWSFAVLLWELVTREVP 210
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 92/226 (40%), Gaps = 26/226 (11%)
Query: 133 SKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGN-QIS 191
++++ GNR S R+LT+L L N ++ L L+ LDL+ N Q+
Sbjct: 35 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 94
Query: 192 GSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSS 251
P T L +L+ + L L P F L + L +N L +P +
Sbjct: 95 SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDD------ 147
Query: 252 LTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKF 311
F D LGN+ + L N +S +F+ SL++LL+ N+
Sbjct: 148 ---------TFRD---------LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189
Query: 312 SGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFN 357
+ P+ +L L L L +N LS L LRAL+ L L N
Sbjct: 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 111/248 (44%), Gaps = 37/248 (14%)
Query: 143 YGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQIS--GSIPNTLGN 200
+G+ PT +L+SL L + N G +E+ L L+ LDL+ N +S G +
Sbjct: 316 FGQFPTL--KLKSLKRLTFTSNK-GGNAFSEV-DLPSLEFLDLSRNGLSFKGCCSQSDFG 371
Query: 201 LKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSK 260
L +DLS N + + + ++F + L +D ++ L +S + ++L
Sbjct: 372 TTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLK--------QMSEFSVFLSLR- 421
Query: 261 NFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFS-GPIPNIL 319
N++ +D+S F SLE L MA N F +P+I
Sbjct: 422 ---------------NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF 466
Query: 320 AELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIF-RHTSM--VH 376
EL+ L LDLS +L P+ +L +L+ LN+ N L+ V +GIF R TS+ +
Sbjct: 467 TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSV--PDGIFDRLTSLQKIW 524
Query: 377 LEGNPKLC 384
L NP C
Sbjct: 525 LHTNPWDC 532
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 138 GGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQL--QELQSLDLAGNQISGSIP 195
GGN F S L SL L+LS N +S + L+ LDL+ N +
Sbjct: 337 GGNAF------SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS 390
Query: 196 NTLGNLKKLNQIDLSGNELASEIPTS-FGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTT 254
N LG L++L +D + L S F + +NL+ +D+S+ LSSL
Sbjct: 391 NFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449
Query: 255 IVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGP 314
+ +F + LP+ L N+ +DLS L P +F + SL+ L MA+N+
Sbjct: 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSV 509
Query: 315 IPNILAELKGLEVLDLSSNKLSGSIP 340
I L L+ + L +N S P
Sbjct: 510 PDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 24/178 (13%)
Query: 181 QSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNG 240
Q ++L +I ++P + NL DLS N L SF +F L +DLS ++
Sbjct: 13 QCMELNFYKIPDNLPFSTKNL------DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT 66
Query: 241 NIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGM--------LGNVVTIDLSANGLSGNLP 292
SLS L+T++ L G + + + L +V ++ + L N P
Sbjct: 67 IEDGAYQSLSHLSTLI------LTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE-NFP 119
Query: 293 NSFKNCKSLEKLLMANNKF-SGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRAL 349
+ K+L++L +A+N S +P + L LE LDLSSNK+ +DL+ L +
Sbjct: 120 --IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 159 LNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEI 218
L+LS+N + ELQ LDL+ +I +L L+ + L+GN + S
Sbjct: 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 92
Query: 219 PTSF---GNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLG 275
+F + Q L++++ + L + +L L NL ++F LPE L
Sbjct: 93 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF---KLPEYFSNLT 149
Query: 276 NVVTIDLSANGLSG 289
N+ +DLS+N +
Sbjct: 150 NLEHLDLSSNKIQS 163
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 100/235 (42%), Gaps = 31/235 (13%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLREGISV-AVKVLDIESTGTWKSF-FAECEALR 506
++R +F +IG G+FG V L+ V A+K+L+ W+ AE R
Sbjct: 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN-----KWEMLKRAETACFR 122
Query: 507 NTRHRNL---VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHGNGLNFL 562
R + K IT+ F++ L LV ++ G L + E + +L
Sbjct: 123 EERDVLVNGDSKWITTLHYA-FQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYL 181
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ IAID L Y+H D +KP NIL+D + ++ DFG L+E Q
Sbjct: 182 AEMVIAIDSVHQLHYVHRD---------IKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 232
Query: 623 SSISSTHVLKGSIGYIPPEY-----GLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
SS++ G+ YI PE G + D +S GV + E+ G +P +
Sbjct: 233 SSVAV-----GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 113/284 (39%), Gaps = 43/284 (15%)
Query: 441 SPQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVL---DIESTGTWK 496
P ++ E+R +F +IG G+F V +++ G A+K++ D+ G
Sbjct: 47 EPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVS 106
Query: 497 SFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI--HGERKNE 554
F E + L N R + +L F++ +L LV E+ G L + GER
Sbjct: 107 CFREERDVLVNGDRRWITQL-----HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPA 161
Query: 555 HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614
+ R +A +I A+D +H + VH D+KP NILLD ++ DFG
Sbjct: 162 E------MARFYLA-EIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211
Query: 615 LLERIGNQSSISSTHVLKGSIGYIPPE-------YGLGEKPSTAGDVYSFGVMLLEIFTG 667
L + V G+ Y+ PE D ++ GV E+F G
Sbjct: 212 L-----RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG 266
Query: 668 MSPTHESFAGEV--SLVKW--------VESNFPKNAQQVLDREL 701
+P + E +V + V+ P+ A+ + R L
Sbjct: 267 QTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLL 310
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 31/218 (14%)
Query: 459 HENL--IGSGSFGSVYKGYLREGI---SVAVKVLD--IESTGTWKSFFAECEALRNTRHR 511
++NL IGSG+ G V Y + I +VA+K L ++ K + E ++ H+
Sbjct: 26 YQNLKPIGSGAQGIVVAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAI 569
N++ L+ + K++E VY L + +L I E +E + L +
Sbjct: 84 NIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY-------- 133
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
+ + +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +
Sbjct: 134 QMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART-----AGTSFMMTPY 185
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
V+ + Y PE LG D++S GV++ E+ G
Sbjct: 186 VV--TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 30/235 (12%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
P+ I Y+ + +F ++L+G G++G V + G VA+K IE K FA
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK--KIEPFD--KPLFA 53
Query: 501 -----ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEH 555
E + L++ +H N++ + F+N + ++ E L L I + ++
Sbjct: 54 LRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQE-LMQTDLHRVISTQMLSDD 112
Query: 556 GNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615
+ L A+ LH ++H DLKP N+L++ + KV DFGLAR +
Sbjct: 113 HIQYFIYQTLR-------AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162
Query: 616 LERIGNQSSISSTHV----LKGSIGYIPPEYGL-GEKPSTAGDVYSFGVMLLEIF 665
E + S + + Y PE L K S A DV+S G +L E+F
Sbjct: 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 95/227 (41%), Gaps = 37/227 (16%)
Query: 463 IGSGSFGSVYKGYLRE-----GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + F E + L+ +VK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK-- 72
Query: 518 TSCSSLDFKNMEF------LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
++ + + L LV E+L +G L D++ R + L L + I
Sbjct: 73 -------YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRL-----LLYSSQI 120
Query: 572 ASALDYL-HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
++YL C VH DL NIL++ + K+ DFGLA+ LL + +
Sbjct: 121 CKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAK-LLPLDKDXXVVREPG- 174
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT----GMSPTHE 673
+ I + PE S DV+SFGV+L E+FT SP+ E
Sbjct: 175 -QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 220
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 26/214 (12%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITS 519
IG G+F V + L G A K+++ + S + E R +H N+V+L S
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
S F LV++ + G L + I + + +++ I A+ + H
Sbjct: 72 ISEEGFHY-----LVFDLVTGGELFEDIVAREYYSEADASHCIQQ------ILEAVLHCH 120
Query: 580 NDCEVPIVHCDLKPGNILLDEDM---TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
++ +VH DLKP N+LL K+ DFGLA +E G+Q + G+ G
Sbjct: 121 ---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQGDQQAWFG---FAGTPG 171
Query: 637 YIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
Y+ PE E D+++ GV+L + G P
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 133/317 (41%), Gaps = 51/317 (16%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTG------TWKSFFAECEALRNTRHRNLVK 515
+GSG F V K + G+ A K + + + + E LR H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L ++N + L+ E + G L D++ + +F+++ I +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGV 128
Query: 576 DYLHNDCEVPIVHCDLKPGNI-LLDEDMT---AKVGDFGLARSLLERIGNQSSISSTHVL 631
+YLH I H DLKP NI LLD+++ K+ DFGLA + + + ++
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI------EDGVEFKNIF 179
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP-----THESFAGEVSLVKWVE 686
G+ ++ PE E D++S GV+ + +G SP E+ A S+ +
Sbjct: 180 -GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL----ITIIESVGLSCTTESPGGRIDIR 742
F + ++ +R+L++ + + + + L IT +++ R
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR----------R 288
Query: 743 EALRRLKNAQKILLKRR 759
E++ L+N +K ++RR
Sbjct: 289 ESVVNLENFRKQYVRRR 305
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 514 VKLI---TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAID 570
+ L+ T SL+ + + +V E + + +L I E +E + L +
Sbjct: 86 IGLLNVFTPQKSLE--EFQDVYIVMELM-DANLSQVIQMELDHERMSYLLY--------Q 134
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
+ + +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V
Sbjct: 135 MLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLART-----AGTSFMMTPYV 186
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
+ + Y PE LG D++S GV++ E+ G
Sbjct: 187 V--TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 133/317 (41%), Gaps = 51/317 (16%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTG------TWKSFFAECEALRNTRHRNLVK 515
+GSG F V K + G+ A K + + + + E LR H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L ++N + L+ E + G L D++ + +F+++ I +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGV 128
Query: 576 DYLHNDCEVPIVHCDLKPGNI-LLDEDMT---AKVGDFGLARSLLERIGNQSSISSTHVL 631
+YLH I H DLKP NI LLD+++ K+ DFGLA + + + ++
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI------EDGVEFKNIF 179
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP-----THESFAGEVSLVKWVE 686
G+ ++ PE E D++S GV+ + +G SP E+ A S+ +
Sbjct: 180 -GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL----ITIIESVGLSCTTESPGGRIDIR 742
F + ++ +R+L++ + + + + L IT +++ R
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR----------R 288
Query: 743 EALRRLKNAQKILLKRR 759
E++ L+N +K ++RR
Sbjct: 289 ESVVNLENFRKQYVRRR 305
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624
++ + +A +++L + +H DL NILL E+ K+ DFGLAR + +
Sbjct: 202 ISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYK------- 251
Query: 625 ISSTHVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+ +V KG + ++ PE + ST DV+S+GV+L EIF+ G SP
Sbjct: 252 -NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP 301
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 30/235 (12%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
P+ I Y+ + +F ++L+G G++G V + G VA+K IE K FA
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK--KIEPFD--KPLFA 53
Query: 501 -----ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEH 555
E + L++ +H N++ + F+N + ++ E + L I + ++
Sbjct: 54 LRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDD 112
Query: 556 GNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615
+ L A+ LH ++H DLKP N+L++ + KV DFGLAR +
Sbjct: 113 HIQYFIYQTLR-------AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162
Query: 616 LERIGNQSSISSTHV----LKGSIGYIPPEYGL-GEKPSTAGDVYSFGVMLLEIF 665
E + S + + Y PE L K S A DV+S G +L E+F
Sbjct: 163 DESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 7/243 (2%)
Query: 133 SKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQL--QELQSLDLAGNQI 190
++L + N+ +L LT L+LS N +S + L+ LDL+ N +
Sbjct: 31 TRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGV 90
Query: 191 SGSIPNTLGNLKKLNQIDLSGNELA--SEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILS 248
N LG L++L +D + L SE F + +NL+ +D+S+
Sbjct: 91 ITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSV-FLSLRNLIYLDISHTHTRVAFNGIFNG 148
Query: 249 LSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMAN 308
LSSL + +F + LP+ L N+ +DLS L P +F + SL+ L M++
Sbjct: 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 208
Query: 309 NKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNL-RALRSLNLTFNNLEGVVPREG 367
N F L L+VLD S N + S +LQ+ +L LNLT N+ +
Sbjct: 209 NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQS 268
Query: 368 IFR 370
+
Sbjct: 269 FLQ 271
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 97/249 (38%), Gaps = 50/249 (20%)
Query: 2 TSLVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFN--KFTGKIPGSLHNLTNIQ----- 54
+S L L SN+L +P+ V DKL L + N F G S T+++
Sbjct: 28 SSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86
Query: 55 ---IIRMAHNLL-------------------EGTVPPGLGNLPFLKMYN----IGFNKIV 88
+I M+ N L E +V L NL +L + + + FN I
Sbjct: 87 FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF 146
Query: 89 GSGDEGLSFITSLTNSTRLNFLAFDGNQF-EGEIPESIGNLSNVLSKLYMGGNRFYGKIP 147
GLS L L GN F E +P+ L N L+ L + + P
Sbjct: 147 N----GLS---------SLEVLKMAGNSFQENFLPDIFTELRN-LTFLDLSQCQLEQLSP 192
Query: 148 TSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNL-KKLNQ 206
T+ L SL +LN+S+N+ L LQ LD + N I S L + L
Sbjct: 193 TAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF 252
Query: 207 IDLSGNELA 215
++L+ N+ A
Sbjct: 253 LNLTQNDFA 261
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 36/226 (15%)
Query: 454 TGNFSHENLIGSGSFGSVYKGYLREG--ISVAVKVLDIESTGTWKSFFAECEAL-RNTRH 510
T + + IG GS+ SV K + + + AVK++D + E E L R +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQH 75
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI- 569
N++ L + + +++ +V E + G L D I ++ F ER A+
Sbjct: 76 PNIITLKDV-----YDDGKYVYVVTELMKGGELLDKILRQK--------FFSEREASAVL 122
Query: 570 -DIASALDYLHNDCEVPIVHCDLKPGNIL-LDED---MTAKVGDFGLARSLLERIGNQSS 624
I ++YLH +VH DLKP NIL +DE + ++ DFG A+ L R N
Sbjct: 123 FTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL--RAENGLL 177
Query: 625 ISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
++ + + ++ PE + A D++S GV+L + TG +P
Sbjct: 178 MTPCY----TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 30/235 (12%)
Query: 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFA 500
P+ I Y+ + +F ++L+G G++G V + G VA+K IE K FA
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIK--KIEPFD--KPLFA 53
Query: 501 -----ECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEH 555
E + L++ +H N++ + F+N + ++ E + L I + ++
Sbjct: 54 LRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDD 112
Query: 556 GNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615
+ L A+ LH ++H DLKP N+L++ + KV DFGLAR +
Sbjct: 113 HIQYFIYQTLR-------AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162
Query: 616 LERIGNQSSISSTHV----LKGSIGYIPPEYGL-GEKPSTAGDVYSFGVMLLEIF 665
E + S + + Y PE L K S A DV+S G +L E+F
Sbjct: 163 DESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 124/295 (42%), Gaps = 14/295 (4%)
Query: 99 TSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTL 158
T+ T+L L +G +P + L N+L KL + N F S SLT
Sbjct: 269 TTFQCFTQLQELDLTATHLKG-LPSGMKGL-NLLKKLVLSVNHFDQLCQISAANFPSLTH 326
Query: 159 LNLSYNSISGEILTEIGQLQEL---QSLDLAGNQISGS--IPNTLGNLKKLNQIDLSGNE 213
L + N ++ +G L++L Q+LDL+ N I S L NL L ++LS NE
Sbjct: 327 LYIRGNV--KKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNE 384
Query: 214 LASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGM 273
+F L +DL+ +L+ N P+ ++NL+ FLD + +
Sbjct: 385 PLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAG 444
Query: 274 LGNVVTIDLSANGLSGNL---PNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDL 330
L + ++L N N + SLE L++++ L + +DL
Sbjct: 445 LPVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDL 504
Query: 331 SSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPR-EGIFRHTSMVHLEGNPKLC 384
S N L+ L +L+ + LNL N++ + PR I S ++L NP C
Sbjct: 505 SHNSLTCDSIDSLSHLKGIY-LNLAANSINIISPRLLPILSQQSTINLSHNPLDC 558
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 89/207 (42%), Gaps = 31/207 (14%)
Query: 153 LRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGN 212
+ SL L ++ IS QLQEL DL + G +P+ + L L ++ LS N
Sbjct: 253 VESLNLQEHRFSDISSTTFQCFTQLQEL---DLTATHLKG-LPSGMKGLNLLKKLVLSVN 308
Query: 213 ELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIG 272
S NF +L + + GN+ K L + L
Sbjct: 309 HFDQLCQISAANFPSLTHL-----YIRGNVKKLHLGVGCLEK------------------ 345
Query: 273 MLGNVVTIDLSANGLSGNLPNS--FKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDL 330
LGN+ T+DLS N + + S KN L+ L +++N+ G E LE+LDL
Sbjct: 346 -LGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDL 404
Query: 331 SSNKLSGSIP-SDLQNLRALRSLNLTF 356
+ +L + P S QNL L+ LNLT+
Sbjct: 405 AFTRLHINAPQSPFQNLHFLQVLNLTY 431
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 103/256 (40%), Gaps = 41/256 (16%)
Query: 45 GSLHNLTNIQIIRMAHNLLEGT--VPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLT 102
G L L N+Q + ++HN +E + L NL L+ N+ N+ +G +
Sbjct: 341 GCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFK------ 394
Query: 103 NSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTS-IGRLRSLTLLNL 161
E P+ L L + R + P S L L +LNL
Sbjct: 395 -----------------ECPQ--------LELLDLAFTRLHINAPQSPFQNLHFLQVLNL 429
Query: 162 SYNSISGEILTEIGQLQELQSLDLAGNQIS-GSIPNT--LGNLKKLNQIDLSGNELASEI 218
+Y + + L L+ L+L GN G+I T L + L + LS L S
Sbjct: 430 TYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSID 489
Query: 219 PTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTI-VNLSKNFLDGTLPEEIGMLGNV 277
+F + + +DLS+N L + I SLS L I +NL+ N ++ P + +L
Sbjct: 490 QQAFHSLGKMSHVDLSHNSLTCD---SIDSLSHLKGIYLNLAANSINIISPRLLPILSQQ 546
Query: 278 VTIDLSANGLSGNLPN 293
TI+LS N L N
Sbjct: 547 STINLSHNPLDCTCSN 562
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 39/249 (15%)
Query: 24 DKLPNLLGFNFCFNKFTGKIPGSLH--NLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYN 81
+KL NL + N SL NL+++Q + ++HN G P L++ +
Sbjct: 344 EKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLD 403
Query: 82 IGFNKI----VGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYM 137
+ F ++ S + L F+ L + FL +P VL L +
Sbjct: 404 LAFTRLHINAPQSPFQNLHFLQVL--NLTYCFLDTSNQHLLAGLP--------VLRHLNL 453
Query: 138 GGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNT 197
GN F T L+++ S+ IL+ G L S+D
Sbjct: 454 KGNHFQDGTITKTNLLQTV-------GSLEVLILSSCG----LLSID----------QQA 492
Query: 198 LGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVN 257
+L K++ +DLS N L + S + + + ++L+ N +N P+ + LS +TI N
Sbjct: 493 FHSLGKMSHVDLSHNSLTCDSIDSLSHLKGIY-LNLAANSINIISPRLLPILSQQSTI-N 550
Query: 258 LSKNFLDGT 266
LS N LD T
Sbjct: 551 LSHNPLDCT 559
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 36/229 (15%)
Query: 456 NFSHENLIGSGSFGSVYKGYLRE------GISVAVKVLD----IESTGTWKSFFAECEAL 505
NF ++G+G++G V+ +R+ G A+KVL ++ T + E + L
Sbjct: 55 NFELLKVLGTGAYGKVF--LVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 506 RNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWI-HGERKNEHGNGLNFLER 564
+ R L+T + F+ L L+ +++ G L + ER EH
Sbjct: 113 EHIRQSPF--LVTLHYA--FQTETKLHLILDYINGGELFTHLSQRERFTEH--------E 160
Query: 565 LNIAI-DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
+ I + +I AL++LH ++ I++ D+K NILLD + + DFGL++ +
Sbjct: 161 VQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV-----AD 212
Query: 624 SISSTHVLKGSIGYIPPEYGLGEKP--STAGDVYSFGVMLLEIFTGMSP 670
+ G+I Y+ P+ G A D +S GV++ E+ TG SP
Sbjct: 213 ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 23/219 (10%)
Query: 457 FSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLV 514
F + +GSG+FG V+ R G+ +K ++ + S + AE E L++ H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
K+ D+ NM +V E G L + I + G L+ + + +A
Sbjct: 84 KIFEVFE--DYHNM---YIVMETCEGGELLERIVSAQAR--GKALSEGYVAELMKQMMNA 136
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDE---DMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
L Y H+ +VH DLKP NIL + K+ DFGLA +S ST+
Sbjct: 137 LAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF------KSDEHSTNA- 186
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE + D++S GV++ + TG P
Sbjct: 187 AGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 116/275 (42%), Gaps = 41/275 (14%)
Query: 463 IGSGSFGSVYKGYLRE---GISVAVKVLDIESTG------TWKSFFAECEALRNTRHRNL 513
+GSG F V K RE G+ A K + + + + E LR H N+
Sbjct: 20 LGSGQFAIVKK--CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ L ++N + L+ E + G L D++ + +F+++ I
Sbjct: 78 ITLHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILD 126
Query: 574 ALDYLHNDCEVPIVHCDLKPGNI-LLDEDMT---AKVGDFGLARSLLERIGNQSSISSTH 629
++YLH I H DLKP NI LLD+++ K+ DFGLA + + + +
Sbjct: 127 GVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI------EDGVEFKN 177
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP-----THESFAGEVSLVKW 684
+ G+ ++ PE E D++S GV+ + +G SP E+ A S+
Sbjct: 178 IF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
Query: 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
+ F + ++ +R+L++ + + + + L
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 132/317 (41%), Gaps = 51/317 (16%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTG------TWKSFFAECEALRNTRHRNLVK 515
+GSG F V K + G+ A K + + + + E LR H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L ++N + L+ E + G L D++ + +F+++ I +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGV 128
Query: 576 DYLHNDCEVPIVHCDLKPGNI-LLDEDMT---AKVGDFGLARSLLERIGNQSSISSTHVL 631
+YLH I H DLKP NI LLD+++ K+ DFGLA + + + ++
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI------EDGVEFKNIF 179
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP-----THESFAGEVSLVKWVE 686
G+ ++ PE E D++S GV+ + +G SP E+ A ++ +
Sbjct: 180 -GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL----ITIIESVGLSCTTESPGGRIDIR 742
F ++ +R+L++ + + + + L IT +++ R
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR----------R 288
Query: 743 EALRRLKNAQKILLKRR 759
E++ L+N +K ++RR
Sbjct: 289 ESVVNLENFRKQYVRRR 305
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 33/216 (15%)
Query: 463 IGSGSFGSVYKGYLRE-----GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + F E + L+ +VK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK-- 75
Query: 518 TSCSSLDFKNMEF------LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
++ + + L LV E+L +G L D++ R + L L + I
Sbjct: 76 -------YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL-----LLYSSQI 123
Query: 572 ASALDYL-HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
++YL C VH DL NIL++ + K+ DFGLA+ L ++
Sbjct: 124 CKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREP 176
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
+ I + PE S DV+SFGV+L E+FT
Sbjct: 177 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Query: 461 NLIGSGSFGSVYKGY--LREGISVAVKVLDI-ESTGTWKSFFAECEALRNTRHRNLVKLI 517
+LIG+GS+G V + Y L + + K+L + E K E L H ++VK++
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI---DIASA 574
D + + L +V E + + +L L+I ++
Sbjct: 119 DIVIPKDVEKFDELYVVLE-IADSDFKKLFRTP---------VYLTELHIKTLLYNLLVG 168
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615
+ Y+H+ I+H DLKP N L+++D + KV DFGLAR++
Sbjct: 169 VKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 37/236 (15%)
Query: 456 NFSHENLIGSGSFGSVYK-GYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLV 514
+F + +G+G+ G V+K + G+ +A K++ +E A+RN R L
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 117
Query: 515 KLITSCSSL-------DFKNMEFLALVYEFLGNGSLGDWIHGE-RKNEHGNGLNFLERLN 566
+++ C+S F + +++ E + GSL + R E G
Sbjct: 118 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-------K 170
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSIS 626
++I + L YL + I+H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 171 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---- 224
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLV 682
G+ Y+ PE G S D++S G+ L+E+ G P A E+ L+
Sbjct: 225 ----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 276
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 133/317 (41%), Gaps = 51/317 (16%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWK------SFFAECEALRNTRHRNLVK 515
+GSG F V K + G+ A K + + + E LR H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L ++N + L+ E + G L D++ + +F+++ I +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGV 128
Query: 576 DYLHNDCEVPIVHCDLKPGNI-LLDEDMT---AKVGDFGLARSLLERIGNQSSISSTHVL 631
+YLH I H DLKP NI LLD+++ K+ DFGLA + + + ++
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI------EDGVEFKNIF 179
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP-----THESFAGEVSLVKWVE 686
G+ ++ PE E D++S GV+ + +G SP E+ A ++ +
Sbjct: 180 -GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL----ITIIESVGLSCTTESPGGRIDIR 742
F ++ +R+L++ + + + + L IT ++ T+ R R
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD-------TQQAMVR---R 288
Query: 743 EALRRLKNAQKILLKRR 759
E++ L+N +K ++RR
Sbjct: 289 ESVVNLENFKKQYVRRR 305
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 33/216 (15%)
Query: 463 IGSGSFGSVYKGYLRE-----GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + F E + L+ +VK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK-- 76
Query: 518 TSCSSLDFKNMEF------LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
++ + + L LV E+L +G L D++ R + L L + I
Sbjct: 77 -------YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL-----LLYSSQI 124
Query: 572 ASALDYL-HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
++YL C VH DL NIL++ + K+ DFGLA+ L ++
Sbjct: 125 CKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREP 177
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
+ I + PE S DV+SFGV+L E+FT
Sbjct: 178 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 23/222 (10%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNLVKLITS 519
IG+G++G V R G VA+K + + K E + L++ +H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 520 C-SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
++ + + + +V + + L IH + + FL +L L Y+
Sbjct: 122 LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQL------LRGLKYM 174
Query: 579 HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI 638
H+ ++H DLKP N+L++E+ K+GDFG+AR L + +V + Y
Sbjct: 175 HS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV--ATRWYR 229
Query: 639 PPEYGLG-EKPSTAGDVYS----FGVMLL--EIFTGMSPTHE 673
PE L + + A D++S FG ML ++F G + H+
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ 271
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 132/317 (41%), Gaps = 51/317 (16%)
Query: 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTG------TWKSFFAECEALRNTRHRNLVK 515
+GSG F V K + G+ A K + + + + E LR H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L ++N + L+ E + G L D++ + +F+++ I +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGV 128
Query: 576 DYLHNDCEVPIVHCDLKPGNI-LLDEDMT---AKVGDFGLARSLLERIGNQSSISSTHVL 631
+YLH I H DLKP NI LLD+++ K+ DFGLA + + + ++
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI------EDGVEFKNIF 179
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP-----THESFAGEVSLVKWVE 686
G+ ++ PE E D++S GV+ + +G SP E+ A ++ +
Sbjct: 180 -GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL----ITIIESVGLSCTTESPGGRIDIR 742
F ++ +R+L++ + + + + L IT +++ R
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVR----------R 288
Query: 743 EALRRLKNAQKILLKRR 759
E++ L+N +K ++RR
Sbjct: 289 ESVVNLENFRKQYVRRR 305
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
++I + L YL + I+H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 135 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 189
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLV 682
G+ Y+ PE G S D++S G+ L+E+ G P A E+ L+
Sbjct: 190 -----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 241
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 124/286 (43%), Gaps = 53/286 (18%)
Query: 120 EIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQ-LQ 178
IP+ +L + ++ L + N+ PT+ R L +L+ +NSIS ++ E+ Q L
Sbjct: 18 HIPD---DLPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSIS-KLEPELCQILP 73
Query: 179 ELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKL 238
L+ L+L N++S T L ++DL N + F N +NL+ +DLS+N L
Sbjct: 74 LLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGL 133
Query: 239 NGNIPKEILSLSSLTTIVNL--------SKNFLDGTLPEEIGMLGN--VVTIDLSANGLS 288
S + L T V L +KN + EE+ LGN + +DLS+N L
Sbjct: 134 ---------SSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLK 184
Query: 289 GNLPNSFKN----------------------C-----KSLEKLLMANNKFSGPIPNILAE 321
P F+ C S++ L +ANN+ + +
Sbjct: 185 EFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSG 244
Query: 322 LK--GLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPR 365
LK L LDLS N L L +LR L+L +NN++ + PR
Sbjct: 245 LKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPR 290
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 133/332 (40%), Gaps = 24/332 (7%)
Query: 43 IPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLT 102
IP L +NI ++ + HN L P L + + GFN I E L I L
Sbjct: 19 IPDDLP--SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPE-LCQILPL- 74
Query: 103 NSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLS 162
L L N+ +I + L++L + N + ++L L+LS
Sbjct: 75 ----LKVLNLQHNEL-SQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLS 129
Query: 163 YNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNL--KKLNQIDLSGNELASEIPT 220
+N +S L QL+ LQ L LA N+I L L L ++DLS N L P
Sbjct: 130 HNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPG 189
Query: 221 SFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLS--KNFLDGTLPEEIGMLG--N 276
F L ++ L+N +LN ++ +++ S T+I NLS N L T L N
Sbjct: 190 CFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTN 249
Query: 277 VVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSS--NK 334
+ +DLS N L SF SL L + N P L L L L K
Sbjct: 250 LTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTK 309
Query: 335 LSGSIPS-------DLQNLRALRSLNLTFNNL 359
S S+ S Q L+ L LN+ NN+
Sbjct: 310 QSVSLASHPNIDDFSFQWLKYLEYLNMDDNNI 341
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 162/414 (39%), Gaps = 78/414 (18%)
Query: 2 TSLVYLGLASNQLWGEIP--YDVGDKLPNLLGFNFCFN-KFTGKIPGSLHNLTNIQIIRM 58
+SL L L+SN L P + KL LL N N T K+ L N T+IQ + +
Sbjct: 171 SSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSN-TSIQNLSL 229
Query: 59 AHNLLEGTVPPGLGNLPF--LKMYNIGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQ 116
A+N L T L + L ++ +N + G+ S++ SL +L+ + N
Sbjct: 230 ANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSL------RYLSLEYNN 283
Query: 117 FEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGR-----------LRSLTLLNLSYNS 165
+ P S LSN+ Y+ R + K S+ L+ L LN+ N+
Sbjct: 284 IQRLSPRSFYGLSNLR---YLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNN 340
Query: 166 ISG------------------EILTEIGQLQE----------LQSLDLAGNQISGSIPNT 197
I + T + L L +L+L N IS T
Sbjct: 341 IPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGT 400
Query: 198 LGNLKKLNQIDLSGNELASEIP-TSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIV 256
L +L +DL NE+ ++ + +N+ I LS NK LS SS +
Sbjct: 401 FSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQ------LSTSSFALVP 454
Query: 257 NLSKNFLDGTL-------PEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANN 309
+L + L P L N+ +DLS N ++ + + ++LE L +N
Sbjct: 455 SLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHN 514
Query: 310 KFS---------GPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNL 354
+ GP+ N L L L +L+L SN L +NL L+S+NL
Sbjct: 515 NLARLWKRANPGGPV-NFLKGLSHLHILNLESNGLDEIPVGVFKNLFELKSINL 567
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + LV +G ++ K +H + + L I
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGAD-----LYKLLKTQHLSNDHICYFL---YQILRG 156
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 157 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 210
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
+ + I AL YL + ++H D+KP NILLDE K+ DFG++ L++ S
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTA-----GDVYSFGVMLLEIFTGMSP 670
G Y+ PE P+ DV+S G+ L+E+ TG P
Sbjct: 186 -------GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 33/216 (15%)
Query: 463 IGSGSFGSVYKGYLRE-----GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
+G G+FGSV G VAVK L + F E + L+ +VK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK-- 88
Query: 518 TSCSSLDFKNMEF------LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
++ + + L LV E+L +G L D++ R + L L + I
Sbjct: 89 -------YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL-----LLYSSQI 136
Query: 572 ASALDYL-HNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630
++YL C VH DL NIL++ + K+ DFGLA+ L ++
Sbjct: 137 CKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREP 189
Query: 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666
+ I + PE S DV+SFGV+L E+FT
Sbjct: 190 GQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 35/235 (14%)
Query: 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLV 514
+F + +G+G+ G V K R G+ +A K++ +E A+RN R L
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIK----------PAIRNQIIREL- 65
Query: 515 KLITSCSSL-------DFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNI 567
+++ C+S F + +++ E + GSL D + E K L +
Sbjct: 66 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEILG-----KV 119
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISS 627
+I + L YL + I+H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 120 SIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----- 172
Query: 628 THVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLV 682
G+ Y+ PE G S D++S G+ L+E+ G P A E+ +
Sbjct: 173 ---FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAI 224
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 27/224 (12%)
Query: 463 IGSGSFGSVYKGYLR-EGISVAVK----VLDIESTGTWKSFFAECEALRNTRHRNLVKLI 517
IG+G++G V R G VA+K D+ + K E + L++ +H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNA--KRTLRELKILKHFKHDNIIAIK 120
Query: 518 TSC-SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALD 576
++ + + + +V + + L IH + + FL +L L
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQL------LRGLK 173
Query: 577 YLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIG 636
Y+H+ ++H DLKP N+L++E+ K+GDFG+AR L + +V +
Sbjct: 174 YMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV--ATRW 228
Query: 637 YIPPEYGLG-EKPSTAGDVYS----FGVMLL--EIFTGMSPTHE 673
Y PE L + + A D++S FG ML ++F G + H+
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ 272
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 514 VKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+ L+ + K++E VY L + +L I E +E + L + +
Sbjct: 86 IGLLNVFTPQ--KSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY--------QM 135
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 136 LCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART-----AGTSFMMTPYVV 187
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
+ Y PE LG D++S G ++ E+ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 36/233 (15%)
Query: 496 KSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEH 555
+ F AE H ++V++ D +V E++G SL K
Sbjct: 130 RQFLAEVV------HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL--------KRSK 175
Query: 556 GNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615
G L E + ++I AL YLH+ + +V+ DLKP NI+L E+ +
Sbjct: 176 GQKLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEEQLKLID-------- 224
Query: 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH--- 672
+G S I+S L G+ G+ PE + P+ A D+Y+ G L + + PT
Sbjct: 225 ---LGAVSRINSFGYLYGTPGFQAPEI-VRTGPTVATDIYTVGRTLAALTLDL-PTRNGR 279
Query: 673 --ESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITII 723
+ + ++K +S + + ++ +D + RQ ++E + QL L ++
Sbjct: 280 YVDGLPEDDPVLKTYDS-YGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREVV 331
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 514 VKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+ L+ + K++E VY L + +L I E +E + L + +
Sbjct: 86 IGLLNVFTPQ--KSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY--------QM 135
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 136 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV 187
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
+ Y PE LG D++S G ++ E+ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
++I + L YL + I+H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 162
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLV 682
G+ Y+ PE G S D++S G+ L+E+ G P A E+ L+
Sbjct: 163 -----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 41/239 (17%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKGYLREGIS--VAVKVL---------DIESTGTWKSFF 499
R +F+ ++G GSFG V R+G A+K+L D+E T K
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLA-DRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVL 73
Query: 500 AECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGL 559
A + + + SC F+ ++ L V E++ G L I K + +
Sbjct: 74 ALLDK------PPFLTQLHSC----FQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAV 123
Query: 560 NFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERI 619
+ A +I+ L +LH I++ DLK N++LD + K+ DFG+ +
Sbjct: 124 FY------AAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE----- 169
Query: 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE 678
+ +T G+ YI PE + + D +++GV+L E+ G P F GE
Sbjct: 170 -HMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP----FDGE 223
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
++I + L YL + I+H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 162
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLV 682
G+ Y+ PE G S D++S G+ L+E+ G P A E+ L+
Sbjct: 163 -----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
++I + L YL + I+H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 162
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLV 682
G+ Y+ PE G S D++S G+ L+E+ G P A E+ L+
Sbjct: 163 -----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 37/273 (13%)
Query: 463 IGSGSFGSV----YKGYLREGISVAVKVLDIESTG---TWKSFFAECEALRNTRHRNLVK 515
+GSG F V KG +E + +K + S+ + + E LR RH N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L F+N + L+ E + G L D++ + FL++ I +
Sbjct: 73 LHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ------ILDGV 121
Query: 576 DYLHNDCEVPIVHCDLKPGNI-LLDEDM---TAKVGDFGLARSLLERIGNQSSISSTHVL 631
YLH+ I H DLKP NI LLD+++ K+ DFG+A + GN+ +
Sbjct: 122 HYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFK-----NI 171
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW-VE 686
G+ ++ PE E D++S GV+ + +G SP T + +S V + +
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD 231
Query: 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
+ N ++ +R+L++ + + + L
Sbjct: 232 EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSL 264
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
++I + L YL + I+H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 162
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLV 682
G+ Y+ PE G S D++S G+ L+E+ G P A E+ L+
Sbjct: 163 -----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 514 VKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+ L+ + K++E VY L + +L I E +E + L + +
Sbjct: 86 IGLLNVFTPQ--KSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY--------QM 135
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 136 LCGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART-----AGTSFMMTPYVV 187
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
+ Y PE LG D++S G ++ E+ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 21/224 (9%)
Query: 451 RRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTR 509
R+ F E + G G+FG+V G + G+SVA+K + I+ + L
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQDPRFRNRELQIMQDLAVLH 77
Query: 510 HRNLVKLITSCSSLDFKNME--FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL-- 565
H N+V+L + +L ++ +L +V E++ D +H +N + + L
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-----DTLHRCCRNYYRRQVAPPPILIK 132
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE-DMTAKVGDFGLARSLLERIGNQSS 624
+ ++ LH V + H D+KP N+L++E D T K+ DFG A+ L N +
Sbjct: 133 VFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY 191
Query: 625 ISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTG 667
I S + Y PE G + +TA D++S G + E+ G
Sbjct: 192 ICSRY-------YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 37/273 (13%)
Query: 463 IGSGSFGSV----YKGYLREGISVAVKVLDIESTG---TWKSFFAECEALRNTRHRNLVK 515
+GSG F V KG +E + +K + S+ + + E LR RH N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L F+N + L+ E + G L D++ + FL++ I +
Sbjct: 80 LHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ------ILDGV 128
Query: 576 DYLHNDCEVPIVHCDLKPGNI-LLDEDM---TAKVGDFGLARSLLERIGNQSSISSTHVL 631
YLH+ I H DLKP NI LLD+++ K+ DFG+A + GN+ +
Sbjct: 129 HYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFK-----NI 178
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW-VE 686
G+ ++ PE E D++S GV+ + +G SP T + +S V + +
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD 238
Query: 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
+ N ++ +R+L++ + + + L
Sbjct: 239 EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSL 271
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 514 VKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+ L+ + K++E VY L + +L I E +E + L + +
Sbjct: 86 IGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QM 135
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 136 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV 187
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
+ Y PE LG D++S G ++ E+ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 37/273 (13%)
Query: 463 IGSGSFGSV----YKGYLREGISVAVKVLDIESTG---TWKSFFAECEALRNTRHRNLVK 515
+GSG F V KG +E + +K + S+ + + E LR RH N++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L F+N + L+ E + G L D++ + FL++ I +
Sbjct: 94 LHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ------ILDGV 142
Query: 576 DYLHNDCEVPIVHCDLKPGNI-LLDEDM---TAKVGDFGLARSLLERIGNQSSISSTHVL 631
YLH+ I H DLKP NI LLD+++ K+ DFG+A + GN+ +
Sbjct: 143 HYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFK-----NI 192
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP----THESFAGEVSLVKW-VE 686
G+ ++ PE E D++S GV+ + +G SP T + +S V + +
Sbjct: 193 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFD 252
Query: 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCL 719
+ N ++ +R+L++ + + + L
Sbjct: 253 EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSL 285
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 514 VKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+ L+ + K++E VY L + +L I E +E + L + +
Sbjct: 87 IGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QM 136
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 137 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV 188
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
+ Y PE LG D++S G ++ E+ G
Sbjct: 189 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 514 VKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+ L+ + K++E VY L + +L I E +E + L + +
Sbjct: 86 IGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QM 135
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 136 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV 187
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
+ Y PE LG D++S G ++ E+ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 514 VKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+ L+ + K++E VY L + +L I E +E + L + +
Sbjct: 86 IGLLNVFTPQ--KSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY--------QM 135
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 136 LVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLART-----AGTSFMMTPYVV 187
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
+ Y PE LG D++S G ++ E+ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
++I + L YL + I+H D+KP NIL++ K+ DFG++ L++ + N+
Sbjct: 111 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANE--- 165
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE G S D++S G+ L+E+ G P
Sbjct: 166 -----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 568 AIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISS 627
+ +A +++L + +H DL NILL E K+ DFGLAR + +
Sbjct: 197 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK--------DP 245
Query: 628 THVLKGS----IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670
+V KG + ++ PE + DV+SFGV+L EIF+ G SP
Sbjct: 246 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 537 FLGNGSLGDWIHGERKNEHGNGLNFLERL-NIAIDIASALDYLHNDCEVPIVHCDLKPGN 595
F+ SL D E + LE L + +A +++L + +H DL N
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 223
Query: 596 ILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKPSTA 651
ILL E K+ DFGLAR + + +V KG + ++ PE +
Sbjct: 224 ILLSEKNVVKICDFGLARDIYK--------DPDYVRKGDARLPLKWMAPETIFDRVYTIQ 275
Query: 652 GDVYSFGVMLLEIFT-GMSP 670
DV+SFGV+L EIF+ G SP
Sbjct: 276 SDVWSFGVLLWEIFSLGASP 295
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTH 629
D AL +LH+ +VH D+KP NI L K+GDFGL L + +
Sbjct: 165 DTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVEL-------GTAGAGE 214
Query: 630 VLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672
V +G Y+ PE G TA DV+S G+ +LE+ M H
Sbjct: 215 VQEGDPRYMAPELLQGSY-GTAADVFSLGLTILEVACNMELPH 256
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 537 FLGNGSLGDWIHGERKNEHGNGLNFLERL-NIAIDIASALDYLHNDCEVPIVHCDLKPGN 595
F+ SL D E + LE L + +A +++L + +H DL N
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 228
Query: 596 ILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKPSTA 651
ILL E K+ DFGLAR + + +V KG + ++ PE +
Sbjct: 229 ILLSEKNVVKICDFGLARDIYK--------DPDYVRKGDARLPLKWMAPETIFDRVYTIQ 280
Query: 652 GDVYSFGVMLLEIFT-GMSP 670
DV+SFGV+L EIF+ G SP
Sbjct: 281 SDVWSFGVLLWEIFSLGASP 300
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 537 FLGNGSLGDWIHGERKNEHGNGLNFLERL-NIAIDIASALDYLHNDCEVPIVHCDLKPGN 595
F+ SL D E + LE L + +A +++L + +H DL N
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 230
Query: 596 ILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKPSTA 651
ILL E K+ DFGLAR + + +V KG + ++ PE +
Sbjct: 231 ILLSEKNVVKICDFGLARDIYK--------DPDYVRKGDARLPLKWMAPETIFDRVYTIQ 282
Query: 652 GDVYSFGVMLLEIFT-GMSP 670
DV+SFGV+L EIF+ G SP
Sbjct: 283 SDVWSFGVLLWEIFSLGASP 302
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
++I + L YL + I+H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 127 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS--- 181
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ Y+ PE G S D++S G+ L+E+ G P
Sbjct: 182 -----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 514 VKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+ L+ + K++E VY L + +L I E +E + L + +
Sbjct: 86 IGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QM 135
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + V+
Sbjct: 136 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPEVV 187
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
+ Y PE LG D++S G ++ E+ G
Sbjct: 188 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLY--------QML 136
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 137 CGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-----AGTSFMMTPYVV- 187
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 188 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLY--------QML 136
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 137 CGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-----AGTSFMMTPYVV- 187
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 188 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLY--------QML 136
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 137 XGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-----AGTSFMMTPYVV- 187
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 188 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 452 RATGNFSHENLIGSGSFGSVYKGYLREG-ISVAVKVLD--IESTGTWKSFFAECEALRNT 508
+ N+ ++LIG GS+G VY Y + +VA+K ++ E K E L
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 509 RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIA 568
+ +++L D + L +V E + + L FL ++
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPI---------FLTEQHVK 134
Query: 569 IDIASAL---DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615
+ + L ++H E I+H DLKP N LL++D + K+ DFGLAR++
Sbjct: 135 TILYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 456 NFSHENLIGSGSFGSVYK-GYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLV 514
+F + +G+G+ G V+K + G+ +A K++ +E A+RN R L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 55
Query: 515 KLITSCSSL-------DFKNMEFLALVYEFLGNGSLGDWIHGE-RKNEHGNGLNFLERLN 566
+++ C+S F + +++ E + GSL + R E G
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-------K 108
Query: 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSIS 626
++I + L YL + I+H D+KP NIL++ K+ DFG++ L++ + N
Sbjct: 109 VSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS---- 162
Query: 627 STHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVS 680
G+ Y+ PE G S D++S G+ L+E+ G P A E S
Sbjct: 163 ----FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDS 212
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 455 GNFSHENLIGSGSFGSVYKGYLREG-ISVAVKVLD--IESTGTWKSFFAECEALRNTRHR 511
N+ ++LIG GS+G VY Y + +VA+K ++ E K E L +
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 512 NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+++L D + L +V E + + L FL +I +
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPI---------FLTEEHIKTIL 135
Query: 572 ASAL---DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615
+ L +++H E I+H DLKP N LL++D + KV DFGLAR++
Sbjct: 136 YNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 36/239 (15%)
Query: 482 VAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLI----TSCSSL-----DFKNMEFLA 532
VA+K + + + K E + +R H N+VK+ S S L + +
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLK 592
+V E++ G EH + + L Y+H+ ++H DLK
Sbjct: 99 IVQEYMETDLANVLEQGPLLEEHARLFMY--------QLLRGLKYIHS---ANVLHRDLK 147
Query: 593 PGNILLD-EDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPST- 650
P N+ ++ ED+ K+GDFGLAR + ++ +S V K Y P L T
Sbjct: 148 PANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK---WYRSPRLLLSPNNYTK 204
Query: 651 AGDVYSFGVMLLEIFTGMSPTHESFAG--EVSLVKWVESNFPKNAQQVLDRELRQLMMS 707
A D+++ G + E+ TG + FAG E+ ++ + + P V+ E RQ ++S
Sbjct: 205 AIDMWAAGCIFAEMLTGKT----LFAGAHELEQMQLILESIP-----VVHEEDRQELLS 254
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 27/224 (12%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLREGIS-VAVKVLDI-----ESTGTWKSFFAEC 502
+++ + + +G G F +VYK + VA+K + + G ++ E
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 503 EALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFL 562
+ L+ H N++ L+ + F + ++LV++F+ L I + +
Sbjct: 64 KLLQELSHPNIIGLLDA-----FGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAY 117
Query: 563 ERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQ 622
+ + L+YLH I+H DLKP N+LLDE+ K+ DFGLA+S G+
Sbjct: 118 MLMTL-----QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF----GSP 165
Query: 623 SSISSTHVLKGSIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIF 665
+ V+ + Y PE G + G D+++ G +L E+
Sbjct: 166 NRAYXHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 149 SIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQID 208
+ LR L +L LS N + + L L +L+L N+++ L KL ++
Sbjct: 54 TFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELW 113
Query: 209 LSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPK-EILSLSSLTTIVNLSKNFLDGTL 267
L N + S +F +L +DL G + + E +S ++ +VNL L
Sbjct: 114 LRNNPIESIPSYAFNRVPSLRRLDL------GELKRLEYISEAAFEGLVNLRYLNLGMCN 167
Query: 268 PEEIGMLGNVVTID---LSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKG 324
++I L +V ++ LS N L P SF+ SL KL + + + + N +LK
Sbjct: 168 LKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKS 227
Query: 325 LEVLDLSSNKLSGSIPSDL 343
LE L+LS N L S+P DL
Sbjct: 228 LEELNLSHNNLM-SLPHDL 245
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 91/204 (44%), Gaps = 11/204 (5%)
Query: 46 SLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLTNST 105
+ +L +++I++++ NL+ LP L + N++ + ++ +
Sbjct: 54 TFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYL------S 107
Query: 106 RLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGG-NRFYGKIPTSIGRLRSLTLLNLSYN 164
+L L N E IP N L +L +G R + L +L LNL
Sbjct: 108 KLRELWLRNNPIES-IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMC 166
Query: 165 SISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGN 224
++ + + L L+ L+L+GN++ P + L L ++ L ++A+ +F +
Sbjct: 167 NLKD--IPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDD 224
Query: 225 FQNLLSIDLSNNKLNGNIPKEILS 248
++L ++LS+N L ++P ++ +
Sbjct: 225 LKSLEELNLSHNNL-MSLPHDLFT 247
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 65/302 (21%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTG--TWKSFFAECEALRN-TRHRNLVKLITS 519
IGSG V++ + A+K +++E T S+ E L +H + + +
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
D +++ +V E GN L W+ ++ ++ ER + ++ A+ +H
Sbjct: 80 YEITD----QYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIH 128
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK----GSI 635
IVH DLKP N L+ + M K+ DFG+A NQ +T V+K G++
Sbjct: 129 QHG---IVHSDLKPANFLIVDGML-KLIDFGIA--------NQMQPDTTSVVKDSQVGTV 176
Query: 636 GYIPPEYGLGEKPST------------AGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683
Y+PPE + + S+ DV+S G +L + G +P
Sbjct: 177 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------------- 222
Query: 684 WVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIRE 743
QQ++++ + + + I+ D ++ V C P RI I E
Sbjct: 223 ---------FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 273
Query: 744 AL 745
L
Sbjct: 274 LL 275
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 26/225 (11%)
Query: 452 RATGNFSHENLIGSGSFGSVYKGYLREGIS-VAVKVLDIE--STGTWKSFFAECEALRNT 508
R T ++ +G G+F V + + A K+++ + S + E R
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 509 RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIA 568
+H N+V+L S S F LV++ + G L + I + + + +
Sbjct: 88 KHPNIVRLHDSISEEGFHY-----LVFDLVTGGELFEDIVAREYYSEADASHCIHQ---- 138
Query: 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDED---MTAKVGDFGLARSLLERIGNQSSI 625
I +++++H IVH DLKP N+LL K+ DFGLA +E G Q +
Sbjct: 139 --ILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQGEQQAW 190
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
G+ GY+ PE + D+++ GV+L + G P
Sbjct: 191 FG---FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 65/302 (21%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTG--TWKSFFAECEALRN-TRHRNLVKLITS 519
IGSG V++ + A+K +++E T S+ E L +H + + +
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
D +++ +V E GN L W+ ++ ++ ER + ++ A+ +H
Sbjct: 77 YEITD----QYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIH 125
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK----GSI 635
IVH DLKP N L+ + M K+ DFG+A NQ +T V+K G++
Sbjct: 126 QHG---IVHSDLKPANFLIVDGML-KLIDFGIA--------NQMQPDTTSVVKDSQVGTV 173
Query: 636 GYIPPEYGLGEKPST------------AGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683
Y+PPE + + S+ DV+S G +L + G +P
Sbjct: 174 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------------- 219
Query: 684 WVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIRE 743
QQ++++ + + + I+ D ++ V C P RI I E
Sbjct: 220 ---------FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 270
Query: 744 AL 745
L
Sbjct: 271 LL 272
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLY--------QML 129
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 130 XGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-----AGTSFMMTPYVV- 180
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 181 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLLY--------QML 136
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 137 XGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLART-----AGTSFMMTPYVV- 187
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 188 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 454 TGNFSHENLIGSGSFGSVYKGYLREGI--SVAVKVLDIESTGTWKSFFAECEAL-RNTRH 510
T + + IG GS+ SV K + + AVK++D + E E L R +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIIDKSK----RDPTEEIEILLRYGQH 75
Query: 511 RNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAI- 569
N++ L + + +++ +V E G L D I ++ F ER A+
Sbjct: 76 PNIITLKDV-----YDDGKYVYVVTELXKGGELLDKILRQK--------FFSEREASAVL 122
Query: 570 -DIASALDYLHNDCEVPIVHCDLKPGNIL-LDED---MTAKVGDFGLARSLLERIGNQSS 624
I ++YLH +VH DLKP NIL +DE + ++ DFG A+ L G +
Sbjct: 123 FTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT 179
Query: 625 ISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
T ++ PE + A D++S GV+L TG +P
Sbjct: 180 PCYT------ANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 136
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 190
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLY--------QML 135
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 136 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV- 186
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 187 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 217
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 136
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 190
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 156
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 157 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 210
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLY--------QML 129
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 130 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV- 180
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 181 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 144/344 (41%), Gaps = 93/344 (27%)
Query: 461 NLIGSGSFGSVYKGYLRE--GISVAVKVLDIESTGTWKSFFAECEALRNT----RHRNLV 514
+ +G G+FG V + + G VAVK++ K+ CEA R+ H N
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIV--------KNVDRYCEAARSEIQVLEHLNTT 71
Query: 515 KLITSCSSLD----FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL-NIAI 569
++ + F++ + +V+E LG + D+I E+G L+ + +A
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFELLGLSTY-DFI-----KENGFLPFRLDHIRKMAY 125
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNIL-LDEDMTA------------------KVGDFG 610
I ++++LH++ + H DLKP NIL + D T KV DFG
Sbjct: 126 QICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMS- 669
A E + S++ ST Y PE L S DV+S G +L+E + G +
Sbjct: 183 SATYDDE---HHSTLVSTR------HYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233
Query: 670 -PTHESFAGEVSLVKWVESNFPKNAQQV-----------LD---------------RELR 702
PTH+S +++++ + PK+ Q LD + L+
Sbjct: 234 FPTHDS-KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLK 292
Query: 703 QLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746
+ M+S + + +L D + ++E P RI +REAL+
Sbjct: 293 EFMLSQDVEHERLFDLIQKMLEY--------DPAKRITLREALK 328
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 138
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 139 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 192
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 65/302 (21%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTG--TWKSFFAECEALRN-TRHRNLVKLITS 519
IGSG V++ + A+K +++E T S+ E L +H + + +
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
D +++ +V E GN L W+ ++ ++ ER + ++ A+ +H
Sbjct: 96 YEITD----QYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIH 144
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK----GSI 635
IVH DLKP N L+ + M K+ DFG+A NQ +T V+K G++
Sbjct: 145 QHG---IVHSDLKPANFLIVDGM-LKLIDFGIA--------NQMQPDTTSVVKDSQVGTV 192
Query: 636 GYIPPEYGLGEKPST------------AGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683
Y+PPE + + S+ DV+S G +L + G +P
Sbjct: 193 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------------- 238
Query: 684 WVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIRE 743
QQ++++ + + + I+ D ++ V C P RI I E
Sbjct: 239 ---------FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289
Query: 744 AL 745
L
Sbjct: 290 LL 291
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLY--------QML 130
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 131 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV- 181
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 182 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 136
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 190
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 140
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 194
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLY--------QML 137
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 138 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV- 188
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 189 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLY--------QML 136
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 137 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV- 187
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 188 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITS 519
+G G+F V + + G A K+++ + S + E R +H N+V+L S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
S F LV++ + G L + I + + ++++ ++
Sbjct: 72 ISEEGFHY-----LVFDLVTGGELFEDIVAREYYSEADASHCIQQILESV---------- 116
Query: 580 NDCEVP-IVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
N C + IVH DLKP N+LL + K+ DFGLA +E G+Q + G+
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQGDQQAWFG---FAGTP 170
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
GY+ PE + D+++ GV+L + G P
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLY--------QML 136
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 137 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV- 187
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 188 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLY--------QML 137
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 138 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV- 188
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 189 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 136
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLAR-VADPDHDHTGFLTEYV--AT 190
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 134
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 135 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 188
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 463 IGSGSFGSVYKGY-LREGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITS 519
+G G+F V + + G A K+++ + S + E R +H N+V+L S
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
S F LV++ + G L + I + + ++++ ++
Sbjct: 72 ISEEGFHY-----LVFDLVTGGELFEDIVAREYYSEADASHCIQQILESV---------- 116
Query: 580 NDCEV-PIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635
N C + IVH DLKP N+LL + K+ DFGLA +E G+Q + G+
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQGDQQAWFG---FAGTP 170
Query: 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
GY+ PE + D+++ GV+L + G P
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 134
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 135 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 188
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 141
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 142 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 195
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 142
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 143 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 196
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 133
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 134 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 187
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 140
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 194
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 140
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 194
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLY--------QML 130
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 131 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV- 181
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 182 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 144
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 145 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 198
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 136
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 137 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 190
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 463 IGSGSFGSVYKG-YLREGISVAVKVLDIESTGTWKSFFAECEALRNTR-HRNLVKLITSC 520
+G GSF K + + + AVK++ + E AL+ H N+VKL
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLHEV- 74
Query: 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN 580
F + LV E L G L + I +K +H + E I + SA+ ++H+
Sbjct: 75 ----FHDQLHTFLVMELLNGGELFERI---KKKKH---FSETEASYIMRKLVSAVSHMHD 124
Query: 581 DCEVPIVHCDLKPGNILL---DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGY 637
V +VH DLKP N+L ++++ K+ DFG AR L+ NQ + L Y
Sbjct: 125 ---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR--LKPPDNQPLKTPCFTLH----Y 175
Query: 638 IPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
PE + D++S GV+L + +G P
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAV-KVLDIESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+ K+ E + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 140
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 194
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 65/302 (21%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTG--TWKSFFAECEALRN-TRHRNLVKLITS 519
IGSG V++ + A+K +++E T S+ E L +H + + +
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
D +++ +V E GN L W+ ++ ++ ER + ++ A+ +H
Sbjct: 76 YEITD----QYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIH 124
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK----GSI 635
IVH DLKP N L+ + M K+ DFG+A NQ +T V+K G++
Sbjct: 125 QHG---IVHSDLKPANFLIVDGML-KLIDFGIA--------NQMQPDTTSVVKDSQVGTV 172
Query: 636 GYIPPEYGLGEKPST------------AGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683
Y+PPE + + S+ DV+S G +L + G +P
Sbjct: 173 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------------- 218
Query: 684 WVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIRE 743
QQ++++ + + + I+ D ++ V C P RI I E
Sbjct: 219 ---------FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 269
Query: 744 AL 745
L
Sbjct: 270 LL 271
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 149 SIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQID 208
+ LR L +L LS N + + L L +L+L N+++ L KL ++
Sbjct: 54 TFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELW 113
Query: 209 LSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPK-EILSLSSLTTIVNLSKNFLDGTL 267
L N + S +F +L +DL G + + E +S ++ +VNL L
Sbjct: 114 LRNNPIESIPSYAFNRVPSLRRLDL------GELKRLEYISEAAFEGLVNLRYLNLGMCN 167
Query: 268 PEEIGMLGNVVTID---LSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKG 324
++I L +V ++ LS N L P SF+ SL KL + + + + N +LK
Sbjct: 168 LKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKS 227
Query: 325 LEVLDLSSNKLSGSIPSDL 343
LE L+LS N L S+P DL
Sbjct: 228 LEELNLSHNNLM-SLPHDL 245
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 85/194 (43%), Gaps = 10/194 (5%)
Query: 46 SLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLTNST 105
+ +L +++I++++ NL+ LP L + N++ + ++ +
Sbjct: 54 TFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYL------S 107
Query: 106 RLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGG-NRFYGKIPTSIGRLRSLTLLNLSYN 164
+L L N E IP N L +L +G R + L +L LNL
Sbjct: 108 KLRELWLRNNPIES-IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMC 166
Query: 165 SISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGN 224
++ + + L L+ L+L+GN++ P + L L ++ L ++A+ +F +
Sbjct: 167 NLKD--IPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDD 224
Query: 225 FQNLLSIDLSNNKL 238
++L ++LS+N L
Sbjct: 225 LKSLEELNLSHNNL 238
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLY--------QML 174
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 175 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV- 225
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 226 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 138
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 139 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 192
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 514 VKLITSCSSLD-FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIA 572
+ L+ + + + + LV E + + +L I E +E + L + +
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLY--------QML 174
Query: 573 SALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 175 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV- 225
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 226 -TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 514 VKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+ L+ + K++E VY L + +L I E +E + L + +
Sbjct: 88 IGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QM 137
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + V+
Sbjct: 138 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMVPFVV 189
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667
+ Y PE LG D++S G ++ E+ G
Sbjct: 190 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 65/302 (21%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTG--TWKSFFAECEALRN-TRHRNLVKLITS 519
IGSG V++ + A+K +++E T S+ E L +H + + +
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
D +++ +V E GN L W+ ++ ++ ER + ++ A+ +H
Sbjct: 124 YEITD----QYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIH 172
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK----GSI 635
IVH DLKP N L+ + M K+ DFG+A NQ +T V+K G++
Sbjct: 173 QHG---IVHSDLKPANFLIVDGML-KLIDFGIA--------NQMQPDTTSVVKDSQVGTV 220
Query: 636 GYIPPEYGLGEKPST------------AGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683
Y+PPE + + S+ DV+S G +L + G +P
Sbjct: 221 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------------- 266
Query: 684 WVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIRE 743
QQ++++ + + + I+ D ++ V C P RI I E
Sbjct: 267 ---------FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317
Query: 744 AL 745
L
Sbjct: 318 LL 319
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 65/302 (21%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTG--TWKSFFAECEALRN-TRHRNLVKLITS 519
IGSG V++ + A+K +++E T S+ E L +H + + +
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
D +++ +V E GN L W+ ++ ++ ER + ++ A+ +H
Sbjct: 124 YEITD----QYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIH 172
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK----GSI 635
IVH DLKP N L+ + M K+ DFG+A NQ +T V+K G++
Sbjct: 173 QHG---IVHSDLKPANFLIVDGML-KLIDFGIA--------NQMQPDTTSVVKDSQVGAV 220
Query: 636 GYIPPEYGLGEKPST------------AGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683
Y+PPE + + S+ DV+S G +L + G +P
Sbjct: 221 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------------- 266
Query: 684 WVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIRE 743
QQ++++ + + + I+ D ++ V C P RI I E
Sbjct: 267 ---------FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317
Query: 744 AL 745
L
Sbjct: 318 LL 319
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKCQHLSNDHICYFL---YQILRG 140
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 194
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 138
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + + +V +
Sbjct: 139 LKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLAR-VADPDHDHTGFLTEYV--AT 192
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 65/302 (21%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTG--TWKSFFAECEALRN-TRHRNLVKLITS 519
IGSG V++ + A+K +++E T S+ E L +H + + +
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
D +++ +V E GN L W+ ++ ++ ER + ++ A+ +H
Sbjct: 124 YEITD----QYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIH 172
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK----GSI 635
IVH DLKP N L+ + M K+ DFG+A NQ +T V+K G++
Sbjct: 173 QHG---IVHSDLKPANFLIVDGML-KLIDFGIA--------NQMQPDTTSVVKDSQVGTV 220
Query: 636 GYIPPEYGLGEKPST------------AGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683
Y+PPE + + S+ DV+S G +L + G +P
Sbjct: 221 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------------- 266
Query: 684 WVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIRE 743
QQ++++ + + + I+ D ++ V C P RI I E
Sbjct: 267 ---------FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317
Query: 744 AL 745
L
Sbjct: 318 LL 319
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 27/213 (12%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 514 VKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+ L+ + K++E VY L + +L I E +E + L + +
Sbjct: 86 IGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QM 135
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ + + + +
Sbjct: 136 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-- 190
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
Y PE LG D++S G ++ E+
Sbjct: 191 -----YRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 26/226 (11%)
Query: 133 SKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGN-QIS 191
++++ GNR S R+LT+L L N+++G L L+ LDL+ N Q+
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLR 93
Query: 192 GSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSS 251
P T L L+ + L L P F L + L +N L +P
Sbjct: 94 VVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQA-LP-------- 144
Query: 252 LTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKF 311
F D LGN+ + L N + ++F+ SL++LL+ N
Sbjct: 145 -------DNTFRD---------LGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHV 188
Query: 312 SGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFN 357
+ P+ +L L L L +N LS L LR+L+ L L N
Sbjct: 189 ARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 234
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 5/207 (2%)
Query: 181 QSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNN-KLN 239
Q + L GN+IS + + + L + L N LA +F L +DLS+N +L
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLR 93
Query: 240 GNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCK 299
P L L T+ +L + L P L + + L N L N+F++
Sbjct: 94 VVDPTTFRGLGHLHTL-HLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLG 152
Query: 300 SLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNL 359
+L L + N+ + L L+ L L N ++ P ++L L +L L NNL
Sbjct: 153 NLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNL 212
Query: 360 EGVVPREGI--FRHTSMVHLEGNPKLC 384
++P E + R + L NP +C
Sbjct: 213 S-MLPAEVLVPLRSLQYLRLNDNPWVC 238
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 17/214 (7%)
Query: 456 NFSHENLIGSGSFGSVYKGY--LREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++ IG G++G V Y +R+ K+ E + E + L RH N+
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS 573
+ + + + M + +V + + + N+H + I
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLY--------QILR 155
Query: 574 ALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKG 633
L Y+H+ ++H DLKP N+L++ K+ DFGLAR + + + + + V
Sbjct: 156 GLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLTEXV--A 209
Query: 634 SIGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
+ Y PE L K T D++S G +L E+ +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 27/221 (12%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVK 515
F E+ +G G+ VY+ + A+KVL + T K E L H N++K
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVL--KKTVDKKIVRTEIGVLLRLSHPNIIK 112
Query: 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575
L F+ ++LV E + G L D I + + + +++ I A+
Sbjct: 113 LKEI-----FETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ------ILEAV 161
Query: 576 DYLHNDCEVPIVHCDLKPGNILLDE---DMTAKVGDFGLARSLLERIGNQSSISSTHVLK 632
YLH E IVH DLKP N+L D K+ DFGL++ + ++ ++ +
Sbjct: 162 AYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT-------VC 211
Query: 633 GSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673
G+ GY PE G D++S G++ + G P ++
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 514 VKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+ L+ + K++E VY L + +L I E +E + L + +
Sbjct: 91 IGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QM 140
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 141 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV 192
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 193 --TRYYRAPEVILGMGYKENVDLWSVGCIMGEM 223
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 461 NLIGSGSFGSVYKG-YLREGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+++G G+ +V++G + + G A+KV + I E E L+ H+N+VKL
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
++ L+ EF GSL + E N +G L E L + D+ +++L
Sbjct: 75 IEEETTTRHK---VLIMEFCPCGSLYTVLE-EPSNAYG--LPESEFLIVLRDVVGGMNHL 128
Query: 579 HNDCEVPIVHCDLKPGNILL----DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
+ IVH ++KPGNI+ D K+ DFG AR L + ++ +S L G+
Sbjct: 129 RENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED---DEQFVS----LYGT 178
Query: 635 IGYIPPEY--------GLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
Y+ P+ +K D++S GV TG P
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 31/244 (12%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLREGISV-AVKVLD----IESTGTWKSFFAECE 503
+LR ++ +IG G+FG V + V A+K+L I+ + + F+ E +
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS-AFFWEERD 121
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLE 563
+ +V+L + F++ +L +V E++ G L + + E
Sbjct: 122 IMAFANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK------WA 170
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
R A ++ ALD +H+ + +H D+KP N+LLD+ K+ DFG + N+
Sbjct: 171 RFYTA-EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-----NKE 221
Query: 624 SISSTHVLKGSIGYIPPEY----GLGEKPSTAGDVYSFGVMLLEIFTGMSPTH-ESFAGE 678
+ G+ YI PE G D +S GV L E+ G +P + +S G
Sbjct: 222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT 281
Query: 679 VSLV 682
S +
Sbjct: 282 YSKI 285
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 514 VKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+ L+ + K++E VY L + +L I E +E + L + +
Sbjct: 80 IGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QM 129
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ S + + +V+
Sbjct: 130 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART-----AGTSFMMTPYVV 181
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
+ Y PE LG D++S G ++ E+
Sbjct: 182 --TRYYRAPEVILGMGYKENVDLWSVGCIMGEM 212
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 44/255 (17%)
Query: 447 YDELRRATGNFSHENLIGSGSFGSVY--KGYLREGISVAVKVLDIESTGTWKSFFAECEA 504
Y+ + + + F E+ IG G+F SVY L+ G + + + T AE +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 505 LRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER 564
L ++ V + C F+ + + + +L + S D + N L+F E
Sbjct: 73 LTVAGGQDNVMGVKYC----FRKNDHVVIAMPYLEHESFLDIL---------NSLSFQEV 119
Query: 565 LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA-KVGDFGLAR---------- 613
+++ AL +H + IVH D+KP N L + + + DFGLA+
Sbjct: 120 REYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELL 176
Query: 614 ------SLLERIG-NQSSISSTHVLK-----GSIGYIPPEYGLGEKP--STAGDVYSFGV 659
+ ER N+ SI + + G+ G+ PE L + P +TA D++S GV
Sbjct: 177 KFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEV-LTKCPNQTTAIDMWSAGV 235
Query: 660 MLLEIFTGMSPTHES 674
+ L + +G P +++
Sbjct: 236 IFLSLLSGRYPFYKA 250
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 31/244 (12%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLREGISV-AVKVLD----IESTGTWKSFFAECE 503
+LR ++ +IG G+FG V + V A+K+L I+ + + F+ E +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS-AFFWEERD 126
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLE 563
+ +V+L + F++ +L +V E++ G L + + E
Sbjct: 127 IMAFANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK------WA 175
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
R A ++ ALD +H+ + +H D+KP N+LLD+ K+ DFG + N+
Sbjct: 176 RFYTA-EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-----NKE 226
Query: 624 SISSTHVLKGSIGYIPPEY----GLGEKPSTAGDVYSFGVMLLEIFTGMSPTH-ESFAGE 678
+ G+ YI PE G D +S GV L E+ G +P + +S G
Sbjct: 227 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT 286
Query: 679 VSLV 682
S +
Sbjct: 287 YSKI 290
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 105/244 (43%), Gaps = 31/244 (12%)
Query: 449 ELRRATGNFSHENLIGSGSFGSVYKGYLREGISV-AVKVLD----IESTGTWKSFFAECE 503
+LR ++ +IG G+FG V + V A+K+L I+ + + F+ E +
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS-AFFWEERD 126
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLE 563
+ +V+L + F++ +L +V E++ G L + + E
Sbjct: 127 IMAFANSPWVVQLFYA-----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK------WA 175
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
R A ++ ALD +H+ + +H D+KP N+LLD+ K+ DFG + N+
Sbjct: 176 RFYTA-EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-----NKE 226
Query: 624 SISSTHVLKGSIGYIPPEY----GLGEKPSTAGDVYSFGVMLLEIFTGMSPTH-ESFAGE 678
+ G+ YI PE G D +S GV L E+ G +P + +S G
Sbjct: 227 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT 286
Query: 679 VSLV 682
S +
Sbjct: 287 YSKI 290
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 35/258 (13%)
Query: 450 LRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST------GTWKSFFAECE 503
L+ ++ +IG G+FG V +R S V + + S F+ E +
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEV--QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLE 563
+ +V+L + F++ ++L +V E++ G L + + E E
Sbjct: 128 IMAFANSPWVVQLFCA-----FQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAE 182
Query: 564 RLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQS 623
+ ALD +H+ + ++H D+KP N+LLD+ K+ DFG + +++
Sbjct: 183 -------VVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM-----DET 227
Query: 624 SISSTHVLKGSIGYIPPEY----GLGEKPSTAGDVYSFGVMLLEIFTGMSPTH-ESFAGE 678
+ G+ YI PE G D +S GV L E+ G +P + +S G
Sbjct: 228 GMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT 287
Query: 679 VSLVKWVESN--FPKNAQ 694
S + +++ FP++A+
Sbjct: 288 YSKIMDHKNSLCFPEDAE 305
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 116/272 (42%), Gaps = 47/272 (17%)
Query: 1 MTSLVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAH 60
+T+L YL L NQ+ P KL NL NK T +L NLTN++ + +
Sbjct: 65 LTNLEYLNLNGNQITDISPLSNLVKLTNLY---IGTNKITDI--SALQNLTNLRELYLNE 119
Query: 61 NLLEGTVPPGLGNLPFLKMYNIGFNKIVG-----SGDEGLSF----------ITSLTNST 105
+ + P L NL N+G N + S GL++ +T + N T
Sbjct: 120 DNISDISP--LANLTKXYSLNLGANHNLSDLSPLSNXTGLNYLTVTESKVKDVTPIANLT 177
Query: 106 RLNFLAFDGNQFEGEIP--------------ESIGNLSNV-----LSKLYMGGNRFYGKI 146
L L+ + NQ E P I +++ V L+ L +G N+
Sbjct: 178 DLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANXTRLNSLKIGNNKITDLS 237
Query: 147 PTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQ 206
P + L LT L + N IS + + L +L+ L++ NQIS + L NL +LN
Sbjct: 238 P--LANLSQLTWLEIGTNQISD--INAVKDLTKLKXLNVGSNQISD--ISVLNNLSQLNS 291
Query: 207 IDLSGNELASEIPTSFGNFQNLLSIDLSNNKL 238
+ L+ N+L +E G NL ++ LS N +
Sbjct: 292 LFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHI 323
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
I + AL++L + + I+H D+KP NILLD K+ DFG++ L++ I
Sbjct: 129 KITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD- 185
Query: 626 SSTHVLKGSIGYIPPEYGLGEKPSTAG-----DVYSFGVMLLEIFTGMSP 670
G Y+ PE + S G DV+S G+ L E+ TG P
Sbjct: 186 ------AGCRPYMAPE-RIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 106/263 (40%), Gaps = 60/263 (22%)
Query: 438 FKHSPQMISYDELRRATGNFSHE----NLIGSGSFGSVYKGYLRE-GISVAVKVLDIEST 492
+ P+ + + L G +S + + +GSG+FG V+ +E V VK + E
Sbjct: 3 LEEPPKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKV 62
Query: 493 --GTW------KSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLG 544
W E L H N++K++ F+N F LV E
Sbjct: 63 LEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDI-----FENQGFFQLVME-------- 109
Query: 545 DWIHGERKNEHGNGLNFLE------RLN------IAIDIASALDYLHNDCEVPIVHCDLK 592
+HG+GL+ RL+ I + SA+ YL I+H D+K
Sbjct: 110 ---------KHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIK 157
Query: 593 PGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAG 652
NI++ ED T K+ DFG A + LER G + G+I Y PE +G P
Sbjct: 158 DENIVIAEDFTIKLIDFGSA-AYLER-GKL-----FYTFCGTIEYCAPEVLMG-NPYRGP 209
Query: 653 --DVYSFGVMLLEIFTGMSPTHE 673
+++S GV L + +P E
Sbjct: 210 ELEMWSLGVTLYTLVFEENPFCE 232
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 140
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + V +
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXV--AT 194
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLV 514
+++ + IG G++G V Y + VA+K + E + E + L RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 515 KLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASA 574
+ + + M+ + +V + + ++ K +H + + L I
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETD-----LYKLLKTQHLSNDHICYFL---YQILRG 141
Query: 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
L Y+H+ ++H DLKP N+LL+ K+ DFGLAR + + + + V +
Sbjct: 142 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXV--AT 195
Query: 635 IGYIPPEYGLGEKPSTAG-DVYSFGVMLLEIFT 666
Y PE L K T D++S G +L E+ +
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 27/213 (12%)
Query: 459 HENL--IGSGSFGSV---YKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL 513
++NL IGSG+ G V Y L +++ ++ K + E ++ H+N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 514 VKLITSCSSLDFKNMEFLALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571
+ L+ + K++E VY L + +L I E +E + L + +
Sbjct: 86 IGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLY--------QM 135
Query: 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVL 631
+ +LH+ I+H DLKP NI++ D T K+ DFGLAR+ + + + +
Sbjct: 136 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-- 190
Query: 632 KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEI 664
Y PE LG D++S G ++ E+
Sbjct: 191 -----YRAPEVILGMGYKENVDLWSVGCIMGEM 218
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 35/242 (14%)
Query: 443 QMISYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISV-AVKVLDIESTGTWKSF-FA 500
Q++ +L R +F +IG G+FG V ++ + A+K+L+ W+ A
Sbjct: 64 QLVKEMQLHRE--DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-----KWEMLKRA 116
Query: 501 ECEALRNTRHRNL---VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHG 556
E R R + + IT+ F++ L LV ++ G L + E K
Sbjct: 117 ETACFREERDVLVNGDCQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED 175
Query: 557 NGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
++ + +AID L Y+H D+KP N+LLD + ++ DFG +
Sbjct: 176 MARFYIGEMVLAIDSIHQLHYVHR---------DIKPDNVLLDVNGHIRLADFGSCLKMN 226
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEY------GLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ QSS++ G+ YI PE G+G K D +S GV + E+ G +P
Sbjct: 227 DDGTVQSSVAV-----GTPDYISPEILQAMEDGMG-KYGPECDWWSLGVCMYEMLYGETP 280
Query: 671 TH 672
+
Sbjct: 281 FY 282
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
Query: 571 IASALDYLHNDCEVPIVHCDLKPGNILLDEDM---TAKVGDFGLARSLLERIGNQSSISS 627
I + YLH + IVH DLKP NILL K+ DFG++R +IG+ +
Sbjct: 140 ILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHACELRE 192
Query: 628 THVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE 678
+ G+ Y+ PE + +TA D+++ G++ + T SP F GE
Sbjct: 193 ---IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP----FVGE 236
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 99/235 (42%), Gaps = 47/235 (20%)
Query: 129 SNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGN 188
++ + KLYMG N P + LT+L L N +S +L +L ++ N
Sbjct: 92 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN 151
Query: 189 QISGSIPNTLGNLKKLNQIDLSGNELA----SEIPTSF-GNFQ-NLLS----------ID 232
+ +T L + LS N L S IP+ F N NLLS +D
Sbjct: 152 NLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELD 211
Query: 233 LSNNKLN---GNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGN---VVTIDLSANG 286
S+N +N G + E+ TI+ L N L T L N +V +DLS N
Sbjct: 212 ASHNSINVVRGPVNVEL-------TILKLQHNNLTDT-----AWLLNYPGLVEVDLSYNE 259
Query: 287 LSGNLPNSFKNCKSLEKLLMANNK------FSGPIPNILAELKGLEVLDLSSNKL 335
L + + F + LE+L ++NN+ + PIP L+VLDLS N L
Sbjct: 260 LEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIP-------TLKVLDLSHNHL 307
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 53 IQIIRMAHNLLEGTVPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLTNSTRLNFLAF 112
IQ + M N + P N+P L + + N + S G+ N+ +L L+
Sbjct: 95 IQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-SSLPRGI-----FHNTPKLTTLSM 148
Query: 113 DGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISG-EIL 171
N E I + + L L + NR + + SL N+SYN +S I
Sbjct: 149 SNNNLE-RIEDDTFQATTSLQNLQLSSNRLTH---VDLSLIPSLFHANVSYNLLSTLAIP 204
Query: 172 TEIGQLQ---------------ELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELAS 216
+ +L EL L L N ++ + L N L ++DLS NEL
Sbjct: 205 IAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTA--WLLNYPGLVEVDLSYNELEK 262
Query: 217 EIPTSFGNFQNLLSIDLSNNKL 238
+ F Q L + +SNN+L
Sbjct: 263 IMYHPFVKMQRLERLYISNNRL 284
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 98/233 (42%), Gaps = 28/233 (12%)
Query: 449 ELRRATGNFSHENL-IGSGSFGSVYKGYLREGISVAVKVL-DIESTGTWKSFFAECEALR 506
E R F +E +G G++G VYK ++G L IE TG S E LR
Sbjct: 14 ERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLR 73
Query: 507 NTRHRNLVKLITS-CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLER- 564
+H N++ L S D K + L++++ L I R ++ L R
Sbjct: 74 ELKHPNVISLQKVFLSHADRK----VWLLFDY-AEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 565 --LNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL----DEDMTAKVGDFGLAR---SL 615
++ I + YLH + ++H DLKP NIL+ E K+ D G AR S
Sbjct: 129 MVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPST-AGDVYSFGVMLLEIFTG 667
L+ + + + T Y PE LG + T A D+++ G + E+ T
Sbjct: 186 LKPLADLDPVVVT------FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 142/344 (41%), Gaps = 93/344 (27%)
Query: 461 NLIGSGSFGSVYKGYLRE--GISVAVKVLDIESTGTWKSFFAECEALRNT----RHRNLV 514
+ +G G+FG V + + G VAVK++ K+ CEA R+ H N
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIV--------KNVDRYCEAARSEIQVLEHLNTT 71
Query: 515 KLITSCSSLD----FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERL-NIAI 569
++ + F++ + +V+E LG + D+I E+G L+ + +A
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFELLGLSTY-DFI-----KENGFLPFRLDHIRKMAY 125
Query: 570 DIASALDYLHNDCEVPIVHCDLKPGNIL-LDEDMTA------------------KVGDFG 610
I ++++LH++ + H DLKP NIL + D T KV DFG
Sbjct: 126 QICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMS- 669
A E + + + H Y PE L S DV+S G +L+E + G +
Sbjct: 183 SATYDDEH--HSTLVXXRH-------YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233
Query: 670 -PTHESFAGEVSLVKWVESNFPKNAQQV-----------LD---------------RELR 702
PTH+S +++++ + PK+ Q LD + L+
Sbjct: 234 FPTHDS-KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLK 292
Query: 703 QLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746
+ M+S + + +L D + ++E P RI +REAL+
Sbjct: 293 EFMLSQDVEHERLFDLIQKMLEY--------DPAKRITLREALK 328
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 119/302 (39%), Gaps = 65/302 (21%)
Query: 463 IGSGSFGSVYKGYLREGISVAVKVLDIESTG--TWKSFFAECEALRN-TRHRNLVKLITS 519
IGSG V++ + A+K +++E T S+ E L +H + + +
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579
D +++ +V E GN L W+ ++ ++ ER + ++ A+ +H
Sbjct: 96 YEITD----QYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIH 144
Query: 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLK----GSI 635
IVH DLKP N L+ + M K+ DFG+A NQ V+K G++
Sbjct: 145 QHG---IVHSDLKPANFLIVDGML-KLIDFGIA--------NQMQPDXXXVVKDSQVGTV 192
Query: 636 GYIPPEYGLGEKPST------------AGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683
Y+PPE + + S+ DV+S G +L + G +P
Sbjct: 193 NYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP------------- 238
Query: 684 WVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIRE 743
QQ++++ + + + I+ D ++ V C P RI I E
Sbjct: 239 ---------FQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289
Query: 744 AL 745
L
Sbjct: 290 LL 291
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 35/242 (14%)
Query: 443 QMISYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISV-AVKVLDIESTGTWKSF-FA 500
Q++ +L R +F +IG G+FG V ++ + A+K+L+ W+ A
Sbjct: 80 QLVKEMQLHRE--DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-----KWEMLKRA 132
Query: 501 ECEALRNTRHRNL---VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHG-ERKNEHG 556
E R R + + IT+ F++ L LV ++ G L + E K
Sbjct: 133 ETACFREERDVLVNGDCQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED 191
Query: 557 NGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616
++ + +AID L Y+H D+KP N+LLD + ++ DFG +
Sbjct: 192 MARFYIGEMVLAIDSIHQLHYVHR---------DIKPDNVLLDVNGHIRLADFGSCLKMN 242
Query: 617 ERIGNQSSISSTHVLKGSIGYIPPEY------GLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
+ QSS++ G+ YI PE G+G K D +S GV + E+ G +P
Sbjct: 243 DDGTVQSSVAV-----GTPDYISPEILQAMEDGMG-KYGPECDWWSLGVCMYEMLYGETP 296
Query: 671 TH 672
+
Sbjct: 297 FY 298
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 228 LLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLD--GTLPEEIGMLGNVVTIDLSAN 285
L +D SNN L + + L+ L T++ L N L + E + ++ +D+S N
Sbjct: 326 FLHLDFSNNLLTDTVFENCGHLTELETLI-LQMNQLKELSKIAEMTTQMKSLQQLDISQN 384
Query: 286 GLSGNLPNSFKNC---KSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSD 342
+S + +C KSL L M++N + I L ++VLDL SNK+ SIP
Sbjct: 385 SVSYDEKKG--DCSWTKSLLSLNMSSNILTDTIFRCLPP--RIKVLDLHSNKI-KSIPKQ 439
Query: 343 LQNLRALRSLNLTFNNLEGVVPREGIF-RHTSM--VHLEGNPKLC 384
+ L AL+ LN+ N L+ V +GIF R TS+ + L NP C
Sbjct: 440 VVKLEALQELNVASNQLKSV--PDGIFDRLTSLQKIWLHTNPWDC 482
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 159 LNLSYNSISGEILTEIGQLQELQSLDLAGNQIS--GSIPNTLGNLKKLNQIDLSGNELA- 215
L+ S N ++ + G L EL++L L NQ+ I +K L Q+D+S N ++
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 216 SEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLG 275
E ++LLS+++S+N L I + L +++L N + ++P+++ L
Sbjct: 389 DEKKGDCSWTKSLLSLNMSSNILTDTIFR---CLPPRIKVLDLHSNKI-KSIPKQVVKLE 444
Query: 276 NVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNI 318
+ +++++N L F SL+K+ + N + P I
Sbjct: 445 ALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 487
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 231 IDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGN 290
+D S N L ++PK+ LS TTI+N+S+N++ +I L + + +S N +
Sbjct: 5 VDRSKNGL-IHVPKD---LSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYL 60
Query: 291 LPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSG-SIPSDLQNLRAL 349
+ FK + LE L +++NK + LK LDLS N I + N+ L
Sbjct: 61 DISVFKFNQELEYLDLSHNKLVKISCHPTVNLKH---LDLSFNAFDALPICKEFGNMSQL 117
Query: 350 RSLNLTFNNLE--GVVP 364
+ L L+ +LE V+P
Sbjct: 118 KFLGLSTTHLEKSSVLP 134
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 110 LAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRF--YGKIPTSIGRLRSLTLLNLSYNSIS 167
L F N + E+ G+L+ L L + N+ KI +++SL L++S NS+S
Sbjct: 329 LDFSNNLLTDTVFENCGHLTE-LETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVS 387
Query: 168 GE--------------------ILTEI---GQLQELQSLDLAGNQISGSIPNTLGNLKKL 204
+ ILT+ ++ LDL N+I SIP + L+ L
Sbjct: 388 YDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKI-KSIPKQVVKLEAL 446
Query: 205 NQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPK 244
+++++ N+L S F +L I L N + + P+
Sbjct: 447 QELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
IA+ I AL++LH+ ++ ++H D+KP N+L++ K+ DFG++ L++ +
Sbjct: 157 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT--- 211
Query: 626 SSTHVLKGSIGYIPPEY---GLGEK-PSTAGDVYSFGVMLLEI 664
+ G Y+ PE L +K S D++S G+ ++E+
Sbjct: 212 ----IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 135/314 (42%), Gaps = 65/314 (20%)
Query: 442 PQMISYDELRRATGN-FSHENLIGSGSFGSVYK----GYLRE--GISVAVKVLDIESTGT 494
P + YD N S +G+G+FG V + G ++ ++VAVK+L + T
Sbjct: 25 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 84
Query: 495 WK-SFFAECEALRNT-RHRNLVKLITSCS----SLDFKNMEFLALVYEFLGNGSLGDWIH 548
+ + +E + L H N+V L+ +C+ +L ++ E+ G L +++
Sbjct: 85 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL---------VITEYCCYGDLLNFLR 135
Query: 549 GERKN------------EHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGN 595
+R + + L+ + L+ + +A + +L + +C +H DL N
Sbjct: 136 RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARN 191
Query: 596 ILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKPSTA 651
ILL K+ DFGLAR I N S+ +V+KG+ + ++ PE +
Sbjct: 192 ILLTHGRITKICDFGLARD----IKNDSN----YVVKGNARLPVKWMAPESIFNCVYTFE 243
Query: 652 GDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQ 711
DV+S+G+ L E+F+ S + + K ++ F M+S E
Sbjct: 244 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF--------------RMLSPEHA 289
Query: 712 TIQLHDCLITIIES 725
+++D + T ++
Sbjct: 290 PAEMYDIMKTCWDA 303
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 135/314 (42%), Gaps = 65/314 (20%)
Query: 442 PQMISYDELRRATGN-FSHENLIGSGSFGSVYK----GYLRE--GISVAVKVLDIESTGT 494
P + YD N S +G+G+FG V + G ++ ++VAVK+L + T
Sbjct: 9 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 68
Query: 495 WK-SFFAECEALRNT-RHRNLVKLITSCS----SLDFKNMEFLALVYEFLGNGSLGDWIH 548
+ + +E + L H N+V L+ +C+ +L ++ E+ G L +++
Sbjct: 69 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL---------VITEYCCYGDLLNFLR 119
Query: 549 GERKN------------EHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGN 595
+R + + L+ + L+ + +A + +L + +C +H DL N
Sbjct: 120 RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARN 175
Query: 596 ILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKPSTA 651
ILL K+ DFGLAR I N S+ +V+KG+ + ++ PE +
Sbjct: 176 ILLTHGRITKICDFGLARD----IKNDSN----YVVKGNARLPVKWMAPESIFNCVYTFE 227
Query: 652 GDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQ 711
DV+S+G+ L E+F+ S + + K ++ F M+S E
Sbjct: 228 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF--------------RMLSPEHA 273
Query: 712 TIQLHDCLITIIES 725
+++D + T ++
Sbjct: 274 PAEMYDIMKTCWDA 287
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 566 NIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSI 625
IA+ I AL++LH+ ++ ++H D+KP N+L++ K+ DFG++ L++ +
Sbjct: 113 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD--- 167
Query: 626 SSTHVLKGSIGYIPPEY---GLGEK-PSTAGDVYSFGVMLLEI 664
+ G Y+ PE L +K S D++S G+ ++E+
Sbjct: 168 ----IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 135/314 (42%), Gaps = 65/314 (20%)
Query: 442 PQMISYDELRRATGN-FSHENLIGSGSFGSVYK----GYLRE--GISVAVKVLDIESTGT 494
P + YD N S +G+G+FG V + G ++ ++VAVK+L + T
Sbjct: 32 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 495 WK-SFFAECEALRNT-RHRNLVKLITSCS----SLDFKNMEFLALVYEFLGNGSLGDWIH 548
+ + +E + L H N+V L+ +C+ +L ++ E+ G L +++
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL---------VITEYCCYGDLLNFLR 142
Query: 549 GERKN------------EHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGN 595
+R + + L+ + L+ + +A + +L + +C +H DL N
Sbjct: 143 RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARN 198
Query: 596 ILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKPSTA 651
ILL K+ DFGLAR I N S+ +V+KG+ + ++ PE +
Sbjct: 199 ILLTHGRITKICDFGLARD----IKNDSN----YVVKGNARLPVKWMAPESIFNCVYTFE 250
Query: 652 GDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQ 711
DV+S+G+ L E+F+ S + + K ++ F M+S E
Sbjct: 251 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF--------------RMLSPEHA 296
Query: 712 TIQLHDCLITIIES 725
+++D + T ++
Sbjct: 297 PAEMYDIMKTCWDA 310
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 135/314 (42%), Gaps = 65/314 (20%)
Query: 442 PQMISYDELRRATGN-FSHENLIGSGSFGSVYK----GYLRE--GISVAVKVLDIESTGT 494
P + YD N S +G+G+FG V + G ++ ++VAVK+L + T
Sbjct: 32 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 495 WK-SFFAECEALRNT-RHRNLVKLITSCS----SLDFKNMEFLALVYEFLGNGSLGDWIH 548
+ + +E + L H N+V L+ +C+ +L ++ E+ G L +++
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL---------VITEYCCYGDLLNFLR 142
Query: 549 GERKN------------EHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGN 595
+R + + L+ + L+ + +A + +L + +C +H DL N
Sbjct: 143 RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARN 198
Query: 596 ILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKPSTA 651
ILL K+ DFGLAR I N S+ +V+KG+ + ++ PE +
Sbjct: 199 ILLTHGRITKICDFGLAR----HIKNDSN----YVVKGNARLPVKWMAPESIFNCVYTFE 250
Query: 652 GDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQ 711
DV+S+G+ L E+F+ S + + K ++ F M+S E
Sbjct: 251 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF--------------RMLSPEHA 296
Query: 712 TIQLHDCLITIIES 725
+++D + T ++
Sbjct: 297 PAEMYDIMKTCWDA 310
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 135/314 (42%), Gaps = 65/314 (20%)
Query: 442 PQMISYDELRRATGN-FSHENLIGSGSFGSVYK----GYLRE--GISVAVKVLDIESTGT 494
P + YD N S +G+G+FG V + G ++ ++VAVK+L + T
Sbjct: 27 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 86
Query: 495 WK-SFFAECEALRNT-RHRNLVKLITSCS----SLDFKNMEFLALVYEFLGNGSLGDWIH 548
+ + +E + L H N+V L+ +C+ +L ++ E+ G L +++
Sbjct: 87 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTL---------VITEYCCYGDLLNFLR 137
Query: 549 GERKN------------EHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGN 595
+R + + L+ + L+ + +A + +L + +C +H DL N
Sbjct: 138 RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARN 193
Query: 596 ILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS----IGYIPPEYGLGEKPSTA 651
ILL K+ DFGLAR I N S+ +V+KG+ + ++ PE +
Sbjct: 194 ILLTHGRITKICDFGLARD----IKNDSN----YVVKGNARLPVKWMAPESIFNCVYTFE 245
Query: 652 GDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQ 711
DV+S+G+ L E+F+ S + + K ++ F M+S E
Sbjct: 246 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF--------------RMLSPEHA 291
Query: 712 TIQLHDCLITIIES 725
+++D + T ++
Sbjct: 292 PAEMYDIMKTCWDA 305
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 30/224 (13%)
Query: 461 NLIGSGSFGSVYKG-YLREGISVAVKVLD-IESTGTWKSFFAECEALRNTRHRNLVKLIT 518
+++G G+ +V++G + + G A+KV + I E E L+ H+N+VKL
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL 578
++ L+ EF GSL + E N +G L E L + D+ +++L
Sbjct: 75 IEEETTTRHK---VLIMEFCPCGSLYTVLE-EPSNAYG--LPESEFLIVLRDVVGGMNHL 128
Query: 579 HNDCEVPIVHCDLKPGNILL----DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGS 634
E IVH ++KPGNI+ D K+ DFG AR L + ++ + L G+
Sbjct: 129 R---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED---DEQFVX----LYGT 178
Query: 635 IGYIPPEY--------GLGEKPSTAGDVYSFGVMLLEIFTGMSP 670
Y+ P+ +K D++S GV TG P
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 99/235 (42%), Gaps = 47/235 (20%)
Query: 129 SNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGN 188
++ + KLYMG N P + LT+L L N +S +L +L ++ N
Sbjct: 98 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN 157
Query: 189 QISGSIPNTLGNLKKLNQIDLSGNELA----SEIPTSF-GNFQ-NLLS----------ID 232
+ +T L + LS N L S IP+ F N NLLS +D
Sbjct: 158 NLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELD 217
Query: 233 LSNNKLN---GNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGN---VVTIDLSANG 286
S+N +N G + E+ TI+ L N L T L N +V +DLS N
Sbjct: 218 ASHNSINVVRGPVNVEL-------TILKLQHNNLTDT-----AWLLNYPGLVEVDLSYNE 265
Query: 287 LSGNLPNSFKNCKSLEKLLMANNK------FSGPIPNILAELKGLEVLDLSSNKL 335
L + + F + LE+L ++NN+ + PIP L+VLDLS N L
Sbjct: 266 LEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIP-------TLKVLDLSHNHL 313
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 53 IQIIRMAHNLLEGTVPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLTNSTRLNFLAF 112
IQ + M N + P N+P L + + N + S G+ N+ +L L+
Sbjct: 101 IQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-SSLPRGI-----FHNTPKLTTLSM 154
Query: 113 DGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISG-EIL 171
N E I + + L L + NR + + SL N+SYN +S I
Sbjct: 155 SNNNLE-RIEDDTFQATTSLQNLQLSSNRL---THVDLSLIPSLFHANVSYNLLSTLAIP 210
Query: 172 TEIGQLQ---------------ELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELAS 216
+ +L EL L L N ++ + L N L ++DLS NEL
Sbjct: 211 IAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTA--WLLNYPGLVEVDLSYNELEK 268
Query: 217 EIPTSFGNFQNLLSIDLSNNKL 238
+ F Q L + +SNN+L
Sbjct: 269 IMYHPFVKMQRLERLYISNNRL 290
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,230,457
Number of Sequences: 62578
Number of extensions: 934819
Number of successful extensions: 5393
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 376
Number of HSP's that attempted gapping in prelim test: 2379
Number of HSP's gapped (non-prelim): 1626
length of query: 767
length of database: 14,973,337
effective HSP length: 106
effective length of query: 661
effective length of database: 8,340,069
effective search space: 5512785609
effective search space used: 5512785609
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)